locus-tag class description B856_00025 PF00209 Sodium:neurotransmitter symporter family B856_00035 PF01189 16S rRNA methyltransferase RsmB/F B856_00035 PF01029 NusB family B856_00040 PF02911 Formyl transferase, C-terminal domain B856_00040 PF00551 Formyl transferase B856_00045 PF00920 Dehydratase family B856_00060 PF03466 LysR substrate binding domain B856_00060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00065 PF00860 Permease family B856_00070 PF00311 Phosphoenolpyruvate carboxylase B856_00075 PF00440 Bacterial regulatory proteins, tetR family B856_00075 PF08361 MAATS-type transcriptional repressor, C-terminal region B856_00080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_00085 PF00873 AcrB/AcrD/AcrF family B856_00095 PF00226 DnaJ domain B856_00095 PF01556 DnaJ C terminal domain B856_00095 PF00684 DnaJ central domain B856_00105 PF05173 Dihydrodipicolinate reductase, C-terminus B856_00105 PF01113 Dihydrodipicolinate reductase, N-terminus B856_00115 PF07690 Major Facilitator Superfamily B856_00120 PF00248 Aldo/keto reductase family B856_00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00125 PF03466 LysR substrate binding domain B856_00135 PF00392 Bacterial regulatory proteins, gntR family B856_00135 PF00155 Aminotransferase class I and II B856_00140 PF08240 Alcohol dehydrogenase GroES-like domain B856_00140 PF00107 Zinc-binding dehydrogenase B856_00145 PF03352 Methyladenine glycosylase B856_00160 PF00730 HhH-GPD superfamily base excision DNA repair protein B856_00160 PF14815 NUDIX domain B856_00160 PF10576 Iron-sulfur binding domain of endonuclease III B856_00160 PF00633 Helix-hairpin-helix motif B856_00175 PF07043 Protein of unknown function (DUF1328) B856_00180 PF03692 Putative zinc- or iron-chelating domain B856_00185 PF07995 Glucose / Sorbosone dehydrogenase B856_00190 PF16193 AAA C-terminal domain B856_00190 PF12002 MgsA AAA+ ATPase C terminal B856_00190 PF00004 ATPase family associated with various cellular activities (AAA) B856_00195 PF01226 Formate/nitrite transporter B856_00210 PF01259 SAICAR synthetase B856_00220 PF00701 Dihydrodipicolinate synthetase family B856_00225 PF00857 Isochorismatase family B856_00230 PF01758 Sodium Bile acid symporter family B856_00235 PF01554 MatE B856_00240 PF04463 Protein of unknown function (DUF523) B856_00245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_00255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_00260 PF14497 Glutathione S-transferase, C-terminal domain B856_00260 PF02798 Glutathione S-transferase, N-terminal domain B856_00270 PF00324 Amino acid permease B856_00280 PF07683 Cobalamin synthesis protein cobW C-terminal domain B856_00280 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_00290 PF07702 UTRA domain B856_00290 PF00392 Bacterial regulatory proteins, gntR family B856_00295 PF05962 HutD B856_00300 PF01175 Urocanase Rossmann-like domain B856_00300 PF17392 Urocanase C-terminal domain B856_00300 PF17391 Urocanase N-terminal domain B856_00305 PF00221 Aromatic amino acid lyase B856_00310 PF00324 Amino acid permease B856_00315 PF01979 Amidohydrolase family B856_00320 PF00491 Arginase family B856_00335 PF01177 Asp/Glu/Hydantoin racemase B856_00340 PF01380 SIS domain B856_00345 PF14602 Hexapeptide repeat of succinyl-transferase B856_00345 PF00132 Bacterial transferase hexapeptide (six repeats) B856_00345 PF12804 MobA-like NTP transferase domain B856_00350 PF04608 Phosphatidylglycerophosphatase A B856_00355 PF02769 AIR synthase related protein, C-terminal domain B856_00355 PF00586 AIR synthase related protein, N-terminal domain B856_00360 PF01029 NusB family B856_00365 PF00885 6,7-dimethyl-8-ribityllumazine synthase B856_00370 PF00925 GTP cyclohydrolase II B856_00370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B856_00395 PF02580 D-Tyr-tRNA(Tyr) deacylase B856_00400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B856_00400 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain B856_00405 PF00581 Rhodanese-like domain B856_00410 PF02666 Phosphatidylserine decarboxylase B856_00415 PF03069 Acetamidase/Formamidase family B856_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_00435 PF11808 Phosphate regulon sensor protein PhoR B856_00435 PF00989 PAS fold B856_00435 PF00512 His Kinase A (phospho-acceptor) domain B856_00440 PF00486 Transcriptional regulatory protein, C terminal B856_00440 PF00072 Response regulator receiver domain B856_00450 PF00106 short chain dehydrogenase B856_00455 PF01554 MatE B856_00460 PF00155 Aminotransferase class I and II B856_00465 PF04286 Protein of unknown function (DUF445) B856_00480 PF04262 Glutamate-cysteine ligase B856_00485 PF02600 Disulfide bond formation protein DsbB B856_00490 PF04717 Type VI secretion system, phage-baseplate injector B856_00495 PF01476 LysM domain B856_00495 PF00877 NlpC/P60 family B856_00510 PF05728 Uncharacterised protein family (UPF0227) B856_00515 PF00986 DNA gyrase B subunit, carboxyl terminus B856_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_00515 PF00204 DNA gyrase B B856_00515 PF01751 Toprim domain B856_00525 PF00106 short chain dehydrogenase B856_00530 PF04115 Ureidoglycolate lyase B856_00535 PF03561 Allantoicase repeat B856_00540 PF01494 FAD binding domain B856_00550 PF00860 Permease family B856_00555 PF00576 HIUase/Transthyretin family B856_00585 PF11412 Disulphide bond corrector protein DsbC B856_00585 PF02683 Cytochrome C biogenesis protein transmembrane region B856_00590 PF00990 Diguanylate cyclase, GGDEF domain B856_00590 PF07694 5TMR of 5TMR-LYT B856_00595 PF07859 alpha/beta hydrolase fold B856_00605 PF03960 ArsC family B856_00610 PF03372 Endonuclease/Exonuclease/phosphatase family B856_00615 PF00156 Phosphoribosyl transferase domain B856_00620 PF07715 TonB-dependent Receptor Plug Domain B856_00620 PF00593 TonB dependent receptor B856_00630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain B856_00630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain B856_00635 PF04101 Glycosyltransferase family 28 C-terminal domain B856_00635 PF03033 Glycosyltransferase family 28 N-terminal domain B856_00640 PF02875 Mur ligase family, glutamate ligase domain B856_00640 PF01225 Mur ligase family, catalytic domain B856_00640 PF08245 Mur ligase middle domain B856_00645 PF01820 D-ala D-ala ligase N-terminus B856_00645 PF07478 D-ala D-ala ligase C-terminus B856_00650 PF08478 POTRA domain, FtsQ-type B856_00650 PF03799 Cell division protein FtsQ B856_00655 PF02491 SHS2 domain inserted in FTSA B856_00660 PF12327 FtsZ family, C-terminal domain B856_00660 PF00091 Tubulin/FtsZ family, GTPase domain B856_00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B856_00675 PF01551 Peptidase family M23 B856_00680 PF00456 Transketolase, thiamine diphosphate binding domain B856_00680 PF17831 Pyruvate dehydrogenase E1 component middle domain B856_00685 PF00364 Biotin-requiring enzyme B856_00685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_00685 PF02817 e3 binding domain B856_00695 PF01169 Uncharacterized protein family UPF0016 B856_00700 PF00593 TonB dependent receptor B856_00700 PF07715 TonB-dependent Receptor Plug Domain B856_00705 PF01613 Flavin reductase like domain B856_00705 PF00258 Flavodoxin B856_00710 PF03692 Putative zinc- or iron-chelating domain B856_00715 PF00571 CBS domain B856_00715 PF00478 IMP dehydrogenase / GMP reductase domain B856_00720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_00720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_00720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B856_00720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_00725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B856_00725 PF01243 Pyridoxamine 5'-phosphate oxidase B856_00730 PF02272 DHHA1 domain B856_00730 PF17768 RecJ OB domain B856_00730 PF01368 DHH family B856_00740 PF00472 RF-1 domain B856_00740 PF03462 PCRF domain B856_00750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_00755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) B856_00760 PF04452 RNA methyltransferase B856_00765 PF00924 Mechanosensitive ion channel B856_00775 PF00501 AMP-binding enzyme B856_00775 PF16177 Acetyl-coenzyme A synthetase N-terminus B856_00775 PF13193 AMP-binding enzyme C-terminal domain B856_00780 PF00857 Isochorismatase family B856_00785 PF01037 Lrp/AsnC ligand binding domain B856_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00795 PF03466 LysR substrate binding domain B856_00800 PF00202 Aminotransferase class-III B856_00805 PF00171 Aldehyde dehydrogenase family B856_00810 PF00324 Amino acid permease B856_00840 PF04076 Bacterial OB fold (BOF) protein B856_00865 PF00561 alpha/beta hydrolase fold B856_00870 PF03616 Sodium/glutamate symporter B856_00880 PF07729 FCD domain B856_00880 PF00392 Bacterial regulatory proteins, gntR family B856_00930 PF00083 Sugar (and other) transporter B856_00930 PF08946 Osmosensory transporter coiled coil B856_00950 PF00155 Aminotransferase class I and II B856_00955 PF02080 TrkA-C domain B856_00955 PF06826 Predicted Permease Membrane Region B856_00965 PF04403 Paraquat-inducible protein A B856_00970 PF02470 MlaD protein B856_00990 PF01343 Peptidase family S49 B856_00990 PF08496 Peptidase family S49 N-terminal B856_00995 PF00005 ABC transporter B856_01000 PF00528 Binding-protein-dependent transport system inner membrane component B856_01005 PF00528 Binding-protein-dependent transport system inner membrane component B856_01010 PF12849 PBP superfamily domain B856_01015 PF00324 Amino acid permease B856_01020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_01020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_01020 PF00205 Thiamine pyrophosphate enzyme, central domain B856_01025 PF01037 Lrp/AsnC ligand binding domain B856_01030 PF00171 Aldehyde dehydrogenase family B856_01035 PF00282 Pyridoxal-dependent decarboxylase conserved domain B856_01040 PF00202 Aminotransferase class-III B856_01050 PF17754 MftR C-terminal domain B856_01050 PF00440 Bacterial regulatory proteins, tetR family B856_01060 PF00487 Fatty acid desaturase B856_01065 PF00970 Oxidoreductase FAD-binding domain B856_01065 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_01065 PF00175 Oxidoreductase NAD-binding domain B856_01070 PF00440 Bacterial regulatory proteins, tetR family B856_01080 PF00271 Helicase conserved C-terminal domain B856_01080 PF18339 RapA N-terminal Tudor like domain 1 B856_01080 PF00176 SNF2 family N-terminal domain B856_01080 PF12137 RNA polymerase recycling family C-terminal B856_01080 PF18337 RapA N-terminal Tudor like domain B856_01085 PF00849 RNA pseudouridylate synthase B856_01095 PF00202 Aminotransferase class-III B856_01100 PF02581 Thiamine monophosphate synthase B856_01125 PF05193 Peptidase M16 inactive domain B856_01125 PF00675 Insulinase (Peptidase family M16) B856_01130 PF02567 Phenazine biosynthesis-like protein B856_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_01140 PF03466 LysR substrate binding domain B856_01145 PF06779 Uncharacterised MFS-type transporter YbfB B856_01160 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_01165 PF00849 RNA pseudouridylate synthase B856_01170 PF03971 Monomeric isocitrate dehydrogenase B856_01180 PF07943 Penicillin-binding protein 5, C-terminal domain B856_01180 PF00768 D-alanyl-D-alanine carboxypeptidase B856_01185 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_01190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_01195 PF00875 DNA photolyase B856_01195 PF03441 FAD binding domain of DNA photolyase B856_01225 PF02350 UDP-N-acetylglucosamine 2-epimerase B856_01240 PF03060 Nitronate monooxygenase B856_01245 PF01207 Dihydrouridine synthase (Dus) B856_01250 PF07759 Protein of unknown function (DUF1615) B856_01260 PF01472 PUA domain B856_01260 PF00696 Amino acid kinase family B856_01265 PF01926 50S ribosome-binding GTPase B856_01265 PF01018 GTP1/OBG B856_01280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B856_01280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_01285 PF00892 EamA-like transporter family B856_01295 PF17757 UvrB interaction domain B856_01295 PF00271 Helicase conserved C-terminal domain B856_01295 PF04851 Type III restriction enzyme, res subunit B856_01295 PF12344 Ultra-violet resistance protein B B856_01295 PF02151 UvrB/uvrC motif B856_01305 PF00990 Diguanylate cyclase, GGDEF domain B856_01305 PF17151 Periplasmic sensor domain B856_01340 PF00106 short chain dehydrogenase B856_01345 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) B856_01350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ B856_01355 PF11967 Recombination protein O N terminal B856_01355 PF02565 Recombination protein O C terminal B856_01365 PF07650 KH domain B856_01365 PF01926 50S ribosome-binding GTPase B856_01370 PF00035 Double-stranded RNA binding motif B856_01370 PF14622 Ribonuclease-III-like B856_01380 PF10502 Signal peptidase, peptidase S26 B856_01385 PF03144 Elongation factor Tu domain 2 B856_01385 PF06421 GTP-binding protein LepA C-terminus B856_01385 PF00009 Elongation factor Tu GTP binding domain B856_01385 PF00679 Elongation factor G C-terminus B856_01395 PF13180 PDZ domain B856_01400 PF00890 FAD binding domain B856_01400 PF02910 Fumarate reductase flavoprotein C-term B856_01410 PF02223 Thymidylate kinase B856_01415 PF02618 YceG-like family B856_01420 PF01063 Amino-transferase class IV B856_01435 PF00528 Binding-protein-dependent transport system inner membrane component B856_01440 PF00528 Binding-protein-dependent transport system inner membrane component B856_01445 PF00005 ABC transporter B856_01445 PF12857 TOBE-like domain B856_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_01450 PF03466 LysR substrate binding domain B856_01460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal B856_01460 PF14602 Hexapeptide repeat of succinyl-transferase B856_01460 PF00132 Bacterial transferase hexapeptide (six repeats) B856_01470 PF06508 Queuosine biosynthesis protein QueC B856_01485 PF00578 AhpC/TSA family B856_01495 PF00293 NUDIX domain B856_01495 PF01467 Cytidylyltransferase-like B856_01500 PF00378 Enoyl-CoA hydratase/isomerase B856_01505 PF01784 NIF3 (NGG1p interacting factor 3) B856_01515 PF07690 Major Facilitator Superfamily B856_01520 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal B856_01520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain B856_01520 PF02769 AIR synthase related protein, C-terminal domain B856_01525 PF01966 HD domain B856_01530 PF01330 RuvA N terminal domain B856_01530 PF07499 RuvA, C-terminal domain B856_01535 PF05496 Holliday junction DNA helicase RuvB P-loop domain B856_01535 PF05491 RuvB C-terminal winged helix domain B856_01535 PF17864 RuvB AAA lid domain B856_01540 PF07687 Peptidase dimerisation domain B856_01540 PF01546 Peptidase family M20/M25/M40 B856_01545 PF03061 Thioesterase superfamily B856_01550 PF01618 MotA/TolQ/ExbB proton channel family B856_01555 PF02472 Biopolymer transport protein ExbD/TolR B856_01565 PF04052 TolB amino-terminal domain B856_01565 PF07676 WD40-like Beta Propeller Repeat B856_01570 PF00691 OmpA family B856_01580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain B856_01585 PF00588 SpoU rRNA Methylase family B856_01585 PF08032 RNA 2'-O ribose methyltransferase substrate binding B856_01615 PF11638 DnaA N-terminal domain B856_01615 PF00308 Bacterial dnaA protein B856_01615 PF08299 Bacterial dnaA protein helix-turn-helix B856_01620 PF01594 AI-2E family transporter B856_01625 PF02769 AIR synthase related protein, C-terminal domain B856_01625 PF00586 AIR synthase related protein, N-terminal domain B856_01630 PF00551 Formyl transferase B856_01635 PF12697 Alpha/beta hydrolase family B856_01640 PF01343 Peptidase family S49 B856_01640 PF06965 Na+/H+ antiporter 1 B856_01650 PF03772 Competence protein B856_01650 PF00753 Metallo-beta-lactamase superfamily B856_01650 PF13567 Domain of unknown function (DUF4131) B856_01655 PF00005 ABC transporter B856_01660 PF02687 FtsX-like permease family B856_01660 PF12704 MacB-like periplasmic core domain B856_01670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 B856_01680 PF00266 Aminotransferase class-V B856_01690 PF13533 Biotin-lipoyl like B856_01710 PF00535 Glycosyl transferase family 2 B856_01725 PF03989 DNA gyrase C-terminal domain, beta-propeller B856_01725 PF00521 DNA gyrase/topoisomerase IV, subunit A B856_01730 PF00766 Electron transfer flavoprotein FAD-binding domain B856_01730 PF01012 Electron transfer flavoprotein domain B856_01735 PF01012 Electron transfer flavoprotein domain B856_01740 PF02899 Phage integrase, N-terminal SAM-like domain B856_01740 PF00589 Phage integrase family B856_01745 PF01810 LysE type translocator B856_01750 PF01678 Diaminopimelate epimerase B856_01755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B856_01755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B856_01765 PF00324 Amino acid permease B856_01770 PF18073 Rubredoxin metal binding domain B856_01780 PF00152 tRNA synthetases class II (D, K and N) B856_01785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_01785 PF11890 Domain of unknown function (DUF3410) B856_01785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_01790 PF06803 Protein of unknown function (DUF1232) B856_01795 PF02634 FdhD/NarQ family B856_01800 PF00384 Molybdopterin oxidoreductase B856_01805 PF02595 Glycerate kinase family B856_01820 PF00881 Nitroreductase family B856_01845 PF00975 Thioesterase domain B856_01845 PF00550 Phosphopantetheine attachment site B856_01845 PF00668 Condensation domain B856_01845 PF13193 AMP-binding enzyme C-terminal domain B856_01845 PF00501 AMP-binding enzyme B856_01860 PF01272 Transcription elongation factor, GreA/GreB, C-term B856_01860 PF03449 Transcription elongation factor, N-terminal B856_01865 PF01464 Transglycosylase SLT domain B856_01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_01875 PF01171 PP-loop family B856_01880 PF01464 Transglycosylase SLT domain B856_01885 PF01435 Peptidase family M48 B856_01895 PF00873 AcrB/AcrD/AcrF family B856_01900 PF03009 Glycerophosphoryl diester phosphodiesterase family B856_01910 PF01219 Prokaryotic diacylglycerol kinase B856_01915 PF00118 TCP-1/cpn60 chaperonin family B856_01920 PF00166 Chaperonin 10 Kd subunit B856_01935 PF03734 L,D-transpeptidase catalytic domain B856_01935 PF17969 L,D-transpeptidase C-terminal domain B856_01940 PF04304 Protein of unknown function (DUF454) B856_01950 PF08085 Entericidin EcnA/B family B856_01955 PF07687 Peptidase dimerisation domain B856_01955 PF01546 Peptidase family M20/M25/M40 B856_01965 PF01627 Hpt domain B856_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_01965 PF00072 Response regulator receiver domain B856_01965 PF01584 CheW-like domain B856_01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B856_01970 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term B856_01975 PF01584 CheW-like domain B856_01980 PF00072 Response regulator receiver domain B856_01985 PF00072 Response regulator receiver domain B856_02000 PF00873 AcrB/AcrD/AcrF family B856_02005 PF04073 Aminoacyl-tRNA editing domain B856_02005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_02005 PF03129 Anticodon binding domain B856_02010 PF07411 Domain of unknown function (DUF1508) B856_02015 PF03831 PhnA domain B856_02015 PF08274 PhnA Zinc-Ribbon B856_02020 PF04343 Protein of unknown function, DUF488 B856_02030 PF01571 Aminomethyltransferase folate-binding domain B856_02035 PF10411 Disulfide bond isomerase protein N-terminus B856_02035 PF13098 Thioredoxin-like domain B856_02050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_02055 PF07715 TonB-dependent Receptor Plug Domain B856_02055 PF00593 TonB dependent receptor B856_02060 PF00871 Acetokinase family B856_02065 PF07085 DRTGG domain B856_02065 PF01515 Phosphate acetyl/butaryl transferase B856_02070 PF05681 Fumarate hydratase (Fumerase) B856_02070 PF05683 Fumarase C-terminus B856_02085 PF07724 AAA domain (Cdc48 subfamily) B856_02085 PF06689 ClpX C4-type zinc finger B856_02085 PF10431 C-terminal, D2-small domain, of ClpB protein B856_02090 PF00574 Clp protease B856_02095 PF05697 Bacterial trigger factor protein (TF) B856_02095 PF05698 Bacterial trigger factor protein (TF) C-terminus B856_02095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_02100 PF00593 TonB dependent receptor B856_02100 PF07715 TonB-dependent Receptor Plug Domain B856_02105 PF18331 PKHD-type hydroxylase C-terminal domain B856_02105 PF13640 2OG-Fe(II) oxygenase superfamily B856_02110 PF00682 HMGL-like B856_02110 PF08502 LeuA allosteric (dimerisation) domain B856_02115 PF00561 alpha/beta hydrolase fold B856_02120 PF07021 Methionine biosynthesis protein MetW B856_02120 PF00561 alpha/beta hydrolase fold B856_02130 PF01725 Ham1 family B856_02140 PF02416 mttA/Hcf106 family B856_02145 PF02416 mttA/Hcf106 family B856_02150 PF00902 Sec-independent protein translocase protein (TatC) B856_02170 PF01790 Prolipoprotein diacylglyceryl transferase B856_02185 PF00303 Thymidylate synthase B856_02190 PF00186 Dihydrofolate reductase B856_02200 PF01625 Peptide methionine sulfoxide reductase B856_02210 PF01618 MotA/TolQ/ExbB proton channel family B856_02220 PF00551 Formyl transferase B856_02220 PF01842 ACT domain B856_02230 PF00171 Aldehyde dehydrogenase family B856_02235 PF00830 Ribosomal L28 family B856_02240 PF00471 Ribosomal protein L33 B856_02245 PF00999 Sodium/hydrogen exchanger family B856_02245 PF02254 TrkA-N domain B856_02265 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) B856_02270 PF00580 UvrD/REP helicase N-terminal domain B856_02270 PF13361 UvrD-like helicase C-terminal domain B856_02285 PF01131 DNA topoisomerase B856_02285 PF01751 Toprim domain B856_02285 PF08272 Topoisomerase I zinc-ribbon-like B856_02285 PF01396 Topoisomerase DNA binding C4 zinc finger B856_02295 PF01638 HxlR-like helix-turn-helix B856_02300 PF00107 Zinc-binding dehydrogenase B856_02300 PF08240 Alcohol dehydrogenase GroES-like domain B856_02315 PF01810 LysE type translocator B856_02320 PF03279 Bacterial lipid A biosynthesis acyltransferase B856_02330 PF00375 Sodium:dicarboxylate symporter family B856_02340 PF02774 Semialdehyde dehydrogenase, dimerisation domain B856_02340 PF01118 Semialdehyde dehydrogenase, NAD binding domain B856_02360 PF01416 tRNA pseudouridine synthase B856_02370 PF01176 Translation initiation factor 1A / IF-1 B856_02385 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_02395 PF00694 Aconitase C-terminal domain B856_02400 PF00330 Aconitase family (aconitate hydratase) B856_02410 PF03466 LysR substrate binding domain B856_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02430 PF00293 NUDIX domain B856_02435 PF01590 GAF domain B856_02435 PF05524 PEP-utilising enzyme, N-terminal B856_02435 PF00391 PEP-utilising enzyme, mobile domain B856_02435 PF02896 PEP-utilising enzyme, TIM barrel domain B856_02440 PF00141 Peroxidase B856_02445 PF12706 Beta-lactamase superfamily domain B856_02450 PF03466 LysR substrate binding domain B856_02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02460 PF02798 Glutathione S-transferase, N-terminal domain B856_02465 PF13280 WYL domain B856_02465 PF08279 HTH domain B856_02470 PF13419 Haloacid dehalogenase-like hydrolase B856_02475 PF01479 S4 domain B856_02475 PF00849 RNA pseudouridylate synthase B856_02480 PF10150 Ribonuclease E/G family B856_02480 PF12111 Polyribonucleotide phosphorylase C terminal B856_02480 PF00575 S1 RNA binding domain B856_02485 PF13193 AMP-binding enzyme C-terminal domain B856_02485 PF00501 AMP-binding enzyme B856_02495 PF02677 Epoxyqueuosine reductase QueH B856_02510 PF07690 Major Facilitator Superfamily B856_02515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B856_02525 PF03466 LysR substrate binding domain B856_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02555 PF07724 AAA domain (Cdc48 subfamily) B856_02555 PF10431 C-terminal, D2-small domain, of ClpB protein B856_02555 PF00004 ATPase family associated with various cellular activities (AAA) B856_02555 PF17871 AAA lid domain B856_02565 PF00691 OmpA family B856_02565 PF01389 OmpA-like transmembrane domain B856_02630 PF00005 ABC transporter B856_02635 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_02640 PF01425 Amidase B856_02645 PF01402 Ribbon-helix-helix protein, copG family B856_02645 PF08753 NikR C terminal nickel binding domain B856_02665 PF02525 Flavodoxin-like fold B856_02670 PF02785 Biotin carboxylase C-terminal domain B856_02670 PF00289 Biotin carboxylase, N-terminal domain B856_02670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_02685 PF08240 Alcohol dehydrogenase GroES-like domain B856_02685 PF13823 Alcohol dehydrogenase GroES-associated B856_02685 PF00107 Zinc-binding dehydrogenase B856_02695 PF00440 Bacterial regulatory proteins, tetR family B856_02720 PF00654 Voltage gated chloride channel B856_02725 PF00364 Biotin-requiring enzyme B856_02725 PF00289 Biotin carboxylase, N-terminal domain B856_02725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_02725 PF02785 Biotin carboxylase C-terminal domain B856_02735 PF07286 Protein of unknown function (DUF1445) B856_02740 PF03746 LamB/YcsF family B856_02745 PF01566 Natural resistance-associated macrophage protein B856_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02750 PF03466 LysR substrate binding domain B856_02765 PF05593 RHS Repeat B856_02765 PF03527 RHS protein B856_02765 PF14220 Domain of unknown function (DUF4329) B856_02770 PF04717 Type VI secretion system, phage-baseplate injector B856_02770 PF16671 Actin cross-linking domain B856_02780 PF13419 Haloacid dehalogenase-like hydrolase B856_02795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_02795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_02815 PF07690 Major Facilitator Superfamily B856_02830 PF03279 Bacterial lipid A biosynthesis acyltransferase B856_02835 PF00990 Diguanylate cyclase, GGDEF domain B856_02835 PF03707 Bacterial signalling protein N terminal repeat B856_02835 PF00563 EAL domain B856_02840 PF00892 EamA-like transporter family B856_02845 PF01037 Lrp/AsnC ligand binding domain B856_02855 PF01624 MutS domain I B856_02855 PF05188 MutS domain II B856_02855 PF00488 MutS domain V B856_02855 PF05190 MutS family domain IV B856_02855 PF05192 MutS domain III B856_02865 PF00037 4Fe-4S binding domain B856_02865 PF11953 Domain of unknown function (DUF3470) B856_02875 PF01596 O-methyltransferase B856_02885 PF00132 Bacterial transferase hexapeptide (six repeats) B856_02890 PF01205 Uncharacterized protein family UPF0029 B856_02900 PF03412 Peptidase C39 family B856_02900 PF00005 ABC transporter B856_02900 PF00664 ABC transporter transmembrane region B856_02905 PF02321 Outer membrane efflux protein B856_02910 PF12399 Branched-chain amino acid ATP-binding cassette transporter B856_02910 PF00005 ABC transporter B856_02915 PF03968 OstA-like protein B856_02930 PF00571 CBS domain B856_02930 PF01380 SIS domain B856_02935 PF01406 tRNA synthetases class I (C) catalytic domain B856_02935 PF09190 DALR domain B856_02965 PF01638 HxlR-like helix-turn-helix B856_02970 PF07690 Major Facilitator Superfamily B856_02995 PF03807 NADP oxidoreductase coenzyme F420-dependent B856_02995 PF14748 Pyrroline-5-carboxylate reductase dimerisation B856_03005 PF00313 'Cold-shock' DNA-binding domain B856_03010 PF01810 LysE type translocator B856_03045 PF13742 OB-fold nucleic acid binding domain B856_03045 PF02601 Exonuclease VII, large subunit B856_03080 PF09278 MerR, DNA binding B856_03080 PF00376 MerR family regulatory protein B856_03085 PF00403 Heavy-metal-associated domain B856_03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03095 PF03466 LysR substrate binding domain B856_03100 PF00355 Rieske [2Fe-2S] domain B856_03100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_03105 PF00866 Ring hydroxylating beta subunit B856_03110 PF00970 Oxidoreductase FAD-binding domain B856_03110 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_03110 PF00175 Oxidoreductase NAD-binding domain B856_03115 PF00106 short chain dehydrogenase B856_03120 PF03594 Benzoate membrane transport protein B856_03125 PF07690 Major Facilitator Superfamily B856_03135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B856_03135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B856_03140 PF00271 Helicase conserved C-terminal domain B856_03140 PF00270 DEAD/DEAH box helicase B856_03140 PF04408 Helicase associated domain (HA2) B856_03140 PF11898 Domain of unknown function (DUF3418) B856_03140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold B856_03145 PF10417 C-terminal domain of 1-Cys peroxiredoxin B856_03145 PF00578 AhpC/TSA family B856_03170 PF00475 Imidazoleglycerol-phosphate dehydratase B856_03175 PF00117 Glutamine amidotransferase class-I B856_03190 PF00977 Histidine biosynthesis protein B856_03205 PF03992 Antibiotic biosynthesis monooxygenase B856_03220 PF01636 Phosphotransferase enzyme family B856_03225 PF00977 Histidine biosynthesis protein B856_03240 PF00230 Major intrinsic protein B856_03265 PF02705 K+ potassium transporter B856_03285 PF02525 Flavodoxin-like fold B856_03290 PF01638 HxlR-like helix-turn-helix B856_03320 PF02311 AraC-like ligand binding domain B856_03320 PF12833 Helix-turn-helix domain B856_03325 PF00248 Aldo/keto reductase family B856_03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03345 PF03466 LysR substrate binding domain B856_03350 PF07690 Major Facilitator Superfamily B856_03370 PF01593 Flavin containing amine oxidoreductase B856_03375 PF02678 Pirin B856_03375 PF05726 Pirin C-terminal cupin domain B856_03380 PF00857 Isochorismatase family B856_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03390 PF00171 Aldehyde dehydrogenase family B856_03395 PF00202 Aminotransferase class-III B856_03400 PF00155 Aminotransferase class I and II B856_03400 PF00392 Bacterial regulatory proteins, gntR family B856_03405 PF00324 Amino acid permease B856_03415 PF03591 AzlC protein B856_03425 PF00436 Single-strand binding protein family B856_03430 PF07690 Major Facilitator Superfamily B856_03440 PF03070 TENA/THI-4/PQQC family B856_03440 PF02581 Thiamine monophosphate synthase B856_03440 PF08543 Phosphomethylpyrimidine kinase B856_03445 PF06942 GlpM protein B856_03455 PF08240 Alcohol dehydrogenase GroES-like domain B856_03455 PF00107 Zinc-binding dehydrogenase B856_03460 PF16925 Tetracyclin repressor-like, C-terminal domain B856_03460 PF00440 Bacterial regulatory proteins, tetR family B856_03465 PF17755 UvrA DNA-binding domain B856_03465 PF00005 ABC transporter B856_03465 PF17760 UvrA interaction domain B856_03475 PF17158 Membrane-associated sensor, integral membrane domain B856_03475 PF00990 Diguanylate cyclase, GGDEF domain B856_03485 PF02028 BCCT, betaine/carnitine/choline family transporter B856_03495 PF00474 Sodium:solute symporter family B856_03500 PF04341 Protein of unknown function, DUF485 B856_03505 PF00072 Response regulator receiver domain B856_03505 PF01627 Hpt domain B856_03505 PF00512 His Kinase A (phospho-acceptor) domain B856_03505 PF00672 HAMP domain B856_03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_03515 PF00196 Bacterial regulatory proteins, luxR family B856_03515 PF00072 Response regulator receiver domain B856_03520 PF03358 NADPH-dependent FMN reductase B856_03525 PF00296 Luciferase-like monooxygenase B856_03540 PF08007 Cupin superfamily protein B856_03545 PF02545 Maf-like protein B856_03555 PF00162 Phosphoglycerate kinase B856_03565 PF01116 Fructose-bisphosphate aldolase class-II B856_03570 PF09312 SurA N-terminal domain B856_03570 PF00639 PPIC-type PPIASE domain B856_03575 PF03968 OstA-like protein B856_03575 PF04453 LPS transport system D B856_03580 PF01636 Phosphotransferase enzyme family B856_03585 PF00483 Nucleotidyl transferase B856_03590 PF02527 rRNA small subunit methyltransferase G B856_03595 PF13614 AAA domain B856_03600 PF02195 ParB-like nuclease domain B856_03600 PF17762 HTH domain found in ParB protein B856_03605 PF01618 MotA/TolQ/ExbB proton channel family B856_03615 PF00664 ABC transporter transmembrane region B856_03615 PF00005 ABC transporter B856_03620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B856_03625 PF02348 Cytidylyltransferase B856_03630 PF09115 DNA polymerase III, delta subunit, C terminal B856_03640 PF01026 TatD related DNase B856_03655 PF02501 Type II secretion system (T2SS), protein I B856_03655 PF07963 Prokaryotic N-terminal methylation motif B856_03660 PF11612 Type II secretion system (T2SS), protein J B856_03660 PF07963 Prokaryotic N-terminal methylation motif B856_03665 PF03934 Type II secretion system (T2SS), protein K B856_03675 PF03167 Uracil DNA glycosylase superfamily B856_03685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B856_03695 PF02224 Cytidylate kinase B856_03700 PF00575 S1 RNA binding domain B856_03705 PF00216 Bacterial DNA-binding protein B856_03715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B856_03725 PF00743 Flavin-binding monooxygenase-like B856_03735 PF03969 AFG1-like ATPase B856_03740 PF01274 Malate synthase B856_03750 PF02472 Biopolymer transport protein ExbD/TolR B856_03755 PF02472 Biopolymer transport protein ExbD/TolR B856_03760 PF01618 MotA/TolQ/ExbB proton channel family B856_03770 PF07715 TonB-dependent Receptor Plug Domain B856_03770 PF00593 TonB dependent receptor B856_03790 PF01432 Peptidase family M3 B856_03795 PF00528 Binding-protein-dependent transport system inner membrane component B856_03800 PF00528 Binding-protein-dependent transport system inner membrane component B856_03805 PF00005 ABC transporter B856_03805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B856_03820 PF00459 Inositol monophosphatase family B856_03830 PF01649 Ribosomal protein S20 B856_03835 PF13460 NAD(P)H-binding B856_03840 PF03737 Aldolase/RraA B856_03860 PF17757 UvrB interaction domain B856_03860 PF00271 Helicase conserved C-terminal domain B856_03860 PF03461 TRCF domain B856_03860 PF00270 DEAD/DEAH box helicase B856_03860 PF02559 CarD-like/TRCF domain B856_03870 PF00211 Adenylate and Guanylate cyclase catalytic domain B856_03875 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_03880 PF00012 Hsp70 protein B856_03885 PF00226 DnaJ domain B856_03885 PF07743 HSCB C-terminal oligomerisation domain B856_03890 PF01521 Iron-sulphur cluster biosynthesis B856_03895 PF01592 NifU-like N terminal domain B856_03900 PF00266 Aminotransferase class-V B856_03905 PF02082 Transcriptional regulator B856_03920 PF00216 Bacterial DNA-binding protein B856_03925 PF09312 SurA N-terminal domain B856_03925 PF00639 PPIC-type PPIASE domain B856_03930 PF12833 Helix-turn-helix domain B856_03930 PF12852 Cupin B856_03935 PF00487 Fatty acid desaturase B856_03940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_03940 PF02770 Acyl-CoA dehydrogenase, middle domain B856_03940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_03945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_03945 PF02770 Acyl-CoA dehydrogenase, middle domain B856_03945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_03950 PF03109 ABC1 family B856_03960 PF04073 Aminoacyl-tRNA editing domain B856_03965 PF06276 Ferric iron reductase FhuF-like transporter B856_03965 PF04183 IucA / IucC family B856_03970 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) B856_03975 PF07690 Major Facilitator Superfamily B856_03980 PF04183 IucA / IucC family B856_03980 PF06276 Ferric iron reductase FhuF-like transporter B856_03985 PF04183 IucA / IucC family B856_03985 PF06276 Ferric iron reductase FhuF-like transporter B856_04000 PF00593 TonB dependent receptor B856_04000 PF07715 TonB-dependent Receptor Plug Domain B856_04040 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase B856_04045 PF02277 Phosphoribosyltransferase B856_04060 PF02654 Cobalamin-5-phosphate synthase B856_04065 PF00793 DAHP synthetase I family B856_04070 PF01925 Sulfite exporter TauE/SafE B856_04090 PF07715 TonB-dependent Receptor Plug Domain B856_04090 PF00593 TonB dependent receptor B856_04095 PF02684 Lipid-A-disaccharide synthetase B856_04105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_04110 PF00005 ABC transporter B856_04145 PF01230 HIT domain B856_04175 PF08241 Methyltransferase domain B856_04180 PF00561 alpha/beta hydrolase fold B856_04185 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_04195 PF02575 YbaB/EbfC DNA-binding family B856_04200 PF13662 Toprim domain B856_04200 PF02132 RecR protein B856_04205 PF00570 HRDC domain B856_04205 PF01612 3'-5' exonuclease B856_04225 PF05166 YcgL domain B856_04235 PF00004 ATPase family associated with various cellular activities (AAA) B856_04235 PF01434 Peptidase family M41 B856_04235 PF17862 AAA+ lid domain B856_04245 PF00291 Pyridoxal-phosphate dependent enzyme B856_04250 PF05175 Methyltransferase small domain B856_04255 PF01264 Chorismate synthase B856_04260 PF00990 Diguanylate cyclase, GGDEF domain B856_04260 PF08448 PAS fold B856_04275 PF04055 Radical SAM superfamily B856_04280 PF00676 Dehydrogenase E1 component B856_04285 PF02780 Transketolase, C-terminal domain B856_04285 PF02779 Transketolase, pyrimidine binding domain B856_04290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_04290 PF00364 Biotin-requiring enzyme B856_04290 PF02817 e3 binding domain B856_04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_04295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_04300 PF00106 short chain dehydrogenase B856_04305 PF00107 Zinc-binding dehydrogenase B856_04305 PF08240 Alcohol dehydrogenase GroES-like domain B856_04310 PF01062 Bestrophin, RFP-TM, chloride channel B856_04315 PF00072 Response regulator receiver domain B856_04315 PF00158 Sigma-54 interaction domain B856_04315 PF02954 Bacterial regulatory protein, Fis family B856_04320 PF00753 Metallo-beta-lactamase superfamily B856_04320 PF04273 Putative phosphatase (DUF442) B856_04325 PF00753 Metallo-beta-lactamase superfamily B856_04325 PF04273 Putative phosphatase (DUF442) B856_04330 PF01925 Sulfite exporter TauE/SafE B856_04345 PF06445 GyrI-like small molecule binding domain B856_04345 PF12833 Helix-turn-helix domain B856_04350 PF01638 HxlR-like helix-turn-helix B856_04355 PF02525 Flavodoxin-like fold B856_04380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B856_04385 PF00528 Binding-protein-dependent transport system inner membrane component B856_04390 PF00005 ABC transporter B856_04405 PF00083 Sugar (and other) transporter B856_04410 PF00593 TonB dependent receptor B856_04410 PF07715 TonB-dependent Receptor Plug Domain B856_04415 PF10415 Fumarase C C-terminus B856_04415 PF00206 Lyase B856_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04430 PF03466 LysR substrate binding domain B856_04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04435 PF03466 LysR substrate binding domain B856_04440 PF02803 Thiolase, C-terminal domain B856_04440 PF00108 Thiolase, N-terminal domain B856_04445 PF02667 Short chain fatty acid transporter B856_04450 PF01144 Coenzyme A transferase B856_04455 PF01144 Coenzyme A transferase B856_04460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04460 PF03466 LysR substrate binding domain B856_04480 PF00440 Bacterial regulatory proteins, tetR family B856_04505 PF01327 Polypeptide deformylase B856_04515 PF02481 DNA recombination-mediator protein A B856_04515 PF17782 DprA winged helix domain B856_04520 PF01300 Telomere recombination B856_04525 PF00892 EamA-like transporter family B856_04530 PF00440 Bacterial regulatory proteins, tetR family B856_04535 PF07690 Major Facilitator Superfamily B856_04545 PF00255 Glutathione peroxidase B856_04555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B856_04560 PF02874 ATP synthase alpha/beta family, beta-barrel domain B856_04560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_04565 PF00231 ATP synthase B856_04570 PF02874 ATP synthase alpha/beta family, beta-barrel domain B856_04570 PF00306 ATP synthase alpha/beta chain, C terminal domain B856_04570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_04575 PF00213 ATP synthase delta (OSCP) subunit B856_04580 PF00430 ATP synthase B/B' CF(0) B856_04585 PF00137 ATP synthase subunit C B856_04590 PF00119 ATP synthase A chain B856_04610 PF00005 ABC transporter B856_04615 PF00950 ABC 3 transport family B856_04620 PF01810 LysE type translocator B856_04625 PF04261 Dyp-type peroxidase family B856_04635 PF03949 Malic enzyme, NAD binding domain B856_04635 PF00390 Malic enzyme, N-terminal domain B856_04640 PF00750 tRNA synthetases class I (R) B856_04640 PF03485 Arginyl tRNA synthetase N terminal domain B856_04640 PF05746 DALR anticodon binding domain B856_04660 PF02678 Pirin B856_04660 PF05726 Pirin C-terminal cupin domain B856_04670 PF03551 Transcriptional regulator PadR-like family B856_04675 PF01909 Nucleotidyltransferase domain B856_04675 PF13427 Domain of unknown function (DUF4111) B856_04680 PF00117 Glutamine amidotransferase class-I B856_04680 PF02540 NAD synthase B856_04680 PF00958 GMP synthase C terminal domain B856_04685 PF04286 Protein of unknown function (DUF445) B856_04690 PF07681 DoxX B856_04695 PF09335 SNARE associated Golgi protein B856_04710 PF13614 AAA domain B856_04720 PF01722 BolA-like protein B856_04735 PF01648 4'-phosphopantetheinyl transferase superfamily B856_04740 PF12697 Alpha/beta hydrolase family B856_04755 PF00975 Thioesterase domain B856_04755 PF00550 Phosphopantetheine attachment site B856_04755 PF00668 Condensation domain B856_04755 PF13193 AMP-binding enzyme C-terminal domain B856_04755 PF00501 AMP-binding enzyme B856_04760 PF07993 Male sterility protein B856_04760 PF00668 Condensation domain B856_04760 PF00550 Phosphopantetheine attachment site B856_04760 PF13193 AMP-binding enzyme C-terminal domain B856_04760 PF00501 AMP-binding enzyme B856_04765 PF08242 Methyltransferase domain B856_04765 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_04765 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_04765 PF14765 Polyketide synthase dehydratase B856_04765 PF00550 Phosphopantetheine attachment site B856_04765 PF00975 Thioesterase domain B856_04765 PF16197 Ketoacyl-synthetase C-terminal extension B856_04770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_04770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_04770 PF02770 Acyl-CoA dehydrogenase, middle domain B856_04775 PF00501 AMP-binding enzyme B856_04780 PF03472 Autoinducer binding domain B856_04780 PF00196 Bacterial regulatory proteins, luxR family B856_04790 PF00765 Autoinducer synthase B856_04795 PF07690 Major Facilitator Superfamily B856_04795 PF00083 Sugar (and other) transporter B856_04800 PF00378 Enoyl-CoA hydratase/isomerase B856_04805 PF00378 Enoyl-CoA hydratase/isomerase B856_04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_04810 PF02770 Acyl-CoA dehydrogenase, middle domain B856_04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_04815 PF13193 AMP-binding enzyme C-terminal domain B856_04815 PF00501 AMP-binding enzyme B856_04820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_04820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_04825 PF00171 Aldehyde dehydrogenase family B856_04835 PF00324 Amino acid permease B856_04840 PF00324 Amino acid permease B856_04845 PF01042 Endoribonuclease L-PSP B856_04850 PF00842 Alanine racemase, C-terminal domain B856_04850 PF01168 Alanine racemase, N-terminal domain B856_04855 PF01266 FAD dependent oxidoreductase B856_04860 PF01037 Lrp/AsnC ligand binding domain B856_04870 PF07715 TonB-dependent Receptor Plug Domain B856_04870 PF00593 TonB dependent receptor B856_04885 PF00849 RNA pseudouridylate synthase B856_04900 PF08361 MAATS-type transcriptional repressor, C-terminal region B856_04900 PF00440 Bacterial regulatory proteins, tetR family B856_04910 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_04910 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_04940 PF00330 Aconitase family (aconitate hydratase) B856_04940 PF00694 Aconitase C-terminal domain B856_04945 PF00285 Citrate synthase, C-terminal domain B856_04955 PF00392 Bacterial regulatory proteins, gntR family B856_04955 PF07729 FCD domain B856_04960 PF00155 Aminotransferase class I and II B856_04965 PF09330 D-lactate dehydrogenase, membrane binding B856_04965 PF01565 FAD binding domain B856_04970 PF01070 FMN-dependent dehydrogenase B856_04975 PF07729 FCD domain B856_04975 PF00392 Bacterial regulatory proteins, gntR family B856_04980 PF02652 L-lactate permease B856_04985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_04985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_04985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_04985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B856_04990 PF16363 GDP-mannose 4,6 dehydratase B856_04995 PF00342 Phosphoglucose isomerase B856_05000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B856_05000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B856_05000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B856_05005 PF00483 Nucleotidyl transferase B856_05010 PF02397 Bacterial sugar transferase B856_05015 PF00535 Glycosyl transferase family 2 B856_05020 PF00534 Glycosyl transferases group 1 B856_05040 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05040 PF14602 Hexapeptide repeat of succinyl-transferase B856_05040 PF12464 Maltose acetyltransferase B856_05050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B856_05055 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B856_05060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B856_05065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B856_05065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B856_05065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B856_05070 PF10531 SLBB domain B856_05070 PF18412 Outer-membrane lipoprotein Wza C-terminal domain B856_05070 PF02563 Polysaccharide biosynthesis/export protein B856_05075 PF01451 Low molecular weight phosphotyrosine protein phosphatase B856_05080 PF13807 G-rich domain on putative tyrosine kinase B856_05080 PF02706 Chain length determinant protein B856_05080 PF13614 AAA domain B856_05085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B856_05090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B856_05090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05095 PF03023 Lipid II flippase MurJ B856_05100 PF01510 N-acetylmuramoyl-L-alanine amidase B856_05105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain B856_05105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain B856_05115 PF05506 Domain of unknown function (DUF756) B856_05115 PF04185 Phosphoesterase family B856_05125 PF03725 3' exoribonuclease family, domain 2 B856_05125 PF01138 3' exoribonuclease family, domain 1 B856_05130 PF00487 Fatty acid desaturase B856_05135 PF00175 Oxidoreductase NAD-binding domain B856_05140 PF00440 Bacterial regulatory proteins, tetR family B856_05145 PF08360 QacR-like protein, C-terminal region B856_05145 PF00440 Bacterial regulatory proteins, tetR family B856_05150 PF01323 DSBA-like thioredoxin domain B856_05160 PF13419 Haloacid dehalogenase-like hydrolase B856_05165 PF00106 short chain dehydrogenase B856_05180 PF00696 Amino acid kinase family B856_05180 PF00583 Acetyltransferase (GNAT) family B856_05185 PF09084 NMT1/THI5 like B856_05190 PF09084 NMT1/THI5 like B856_05195 PF00296 Luciferase-like monooxygenase B856_05200 PF00528 Binding-protein-dependent transport system inner membrane component B856_05205 PF00005 ABC transporter B856_05210 PF00440 Bacterial regulatory proteins, tetR family B856_05210 PF08362 YcdC-like protein, C-terminal region B856_05215 PF01048 Phosphorylase superfamily B856_05225 PF01687 Riboflavin kinase B856_05225 PF06574 FAD synthetase B856_05230 PF08264 Anticodon-binding domain of tRNA B856_05230 PF00133 tRNA synthetases class I (I, L, M and V) B856_05230 PF06827 Zinc finger found in FPG and IleRS B856_05235 PF01252 Signal peptidase (SPase) II B856_05240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05285 PF03061 Thioesterase superfamily B856_05290 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05295 PF07848 PaaX-like protein B856_05295 PF08223 PaaX-like protein C-terminal domain B856_05300 PF00501 AMP-binding enzyme B856_05300 PF14535 AMP-binding enzyme C-terminal domain B856_05305 PF02803 Thiolase, C-terminal domain B856_05305 PF00108 Thiolase, N-terminal domain B856_05310 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain B856_05310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_05310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_05315 PF00378 Enoyl-CoA hydratase/isomerase B856_05320 PF00378 Enoyl-CoA hydratase/isomerase B856_05325 PF00175 Oxidoreductase NAD-binding domain B856_05325 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_05325 PF00970 Oxidoreductase FAD-binding domain B856_05330 PF01883 Iron-sulfur cluster assembly protein B856_05335 PF05138 Phenylacetic acid catabolic protein B856_05340 PF06243 Phenylacetic acid degradation B B856_05345 PF05138 Phenylacetic acid catabolic protein B856_05350 PF00171 Aldehyde dehydrogenase family B856_05350 PF01575 MaoC like domain B856_05355 PF03315 Serine dehydratase beta chain B856_05355 PF03313 Serine dehydratase alpha chain B856_05360 PF13520 Amino acid permease B856_05365 PF00171 Aldehyde dehydrogenase family B856_05370 PF00083 Sugar (and other) transporter B856_05380 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_05380 PF04324 BFD-like [2Fe-2S] binding domain B856_05390 PF01266 FAD dependent oxidoreductase B856_05395 PF05544 Proline racemase B856_05400 PF00392 Bacterial regulatory proteins, gntR family B856_05410 PF00701 Dihydrodipicolinate synthetase family B856_05425 PF09278 MerR, DNA binding B856_05425 PF00376 MerR family regulatory protein B856_05440 PF07690 Major Facilitator Superfamily B856_05445 PF00920 Dehydratase family B856_05450 PF07729 FCD domain B856_05450 PF00392 Bacterial regulatory proteins, gntR family B856_05460 PF03466 LysR substrate binding domain B856_05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05465 PF13378 Enolase C-terminal domain-like B856_05465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B856_05470 PF02426 Muconolactone delta-isomerase B856_05475 PF00775 Dioxygenase B856_05475 PF04444 Catechol dioxygenase N terminus B856_05480 PF01144 Coenzyme A transferase B856_05485 PF01144 Coenzyme A transferase B856_05490 PF00108 Thiolase, N-terminal domain B856_05490 PF02803 Thiolase, C-terminal domain B856_05495 PF12146 Serine aminopeptidase, S33 B856_05500 PF01804 Penicillin amidase B856_05505 PF00171 Aldehyde dehydrogenase family B856_05515 PF01179 Copper amine oxidase, enzyme domain B856_05515 PF07833 Copper amine oxidase N-terminal domain B856_05515 PF02727 Copper amine oxidase, N2 domain B856_05515 PF02728 Copper amine oxidase, N3 domain B856_05520 PF02311 AraC-like ligand binding domain B856_05520 PF12833 Helix-turn-helix domain B856_05525 PF01613 Flavin reductase like domain B856_05530 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_05530 PF00175 Oxidoreductase NAD-binding domain B856_05545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_05545 PF00355 Rieske [2Fe-2S] domain B856_05560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_05565 PF01425 Amidase B856_05580 PF07690 Major Facilitator Superfamily B856_05590 PF00106 short chain dehydrogenase B856_05605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_05605 PF02770 Acyl-CoA dehydrogenase, middle domain B856_05605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05610 PF03466 LysR substrate binding domain B856_05615 PF01614 Bacterial transcriptional regulator B856_05615 PF09339 IclR helix-turn-helix domain B856_05620 PF00753 Metallo-beta-lactamase superfamily B856_05630 PF04143 Sulphur transport B856_05640 PF01011 PQQ enzyme repeat B856_05640 PF13360 PQQ-like domain B856_05645 PF04966 Carbohydrate-selective porin, OprB family B856_05650 PF05048 Periplasmic copper-binding protein (NosD) B856_05655 PF01487 Type I 3-dehydroquinase B856_05660 PF00775 Dioxygenase B856_05665 PF00775 Dioxygenase B856_05665 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal B856_05670 PF02627 Carboxymuconolactone decarboxylase family B856_05675 PF07690 Major Facilitator Superfamily B856_05680 PF00561 alpha/beta hydrolase fold B856_05685 PF10397 Adenylosuccinate lyase C-terminus B856_05685 PF00206 Lyase B856_05690 PF00108 Thiolase, N-terminal domain B856_05690 PF02803 Thiolase, C-terminal domain B856_05695 PF01144 Coenzyme A transferase B856_05700 PF01144 Coenzyme A transferase B856_05705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B856_05710 PF04977 Septum formation initiator B856_05715 PF04239 Protein of unknown function (DUF421) B856_05720 PF00113 Enolase, C-terminal TIM barrel domain B856_05720 PF03952 Enolase, N-terminal domain B856_05725 PF00793 DAHP synthetase I family B856_05730 PF00117 Glutamine amidotransferase class-I B856_05730 PF06418 CTP synthase N-terminus B856_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_05760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_05775 PF00793 DAHP synthetase I family B856_05780 PF02694 Uncharacterised BCR, YnfA/UPF0060 family B856_05785 PF00004 ATPase family associated with various cellular activities (AAA) B856_05785 PF07724 AAA domain (Cdc48 subfamily) B856_05785 PF17871 AAA lid domain B856_05785 PF02861 Clp amino terminal domain, pathogenicity island component B856_05785 PF10431 C-terminal, D2-small domain, of ClpB protein B856_05790 PF02617 ATP-dependent Clp protease adaptor protein ClpS B856_05800 PF01118 Semialdehyde dehydrogenase, NAD binding domain B856_05800 PF02774 Semialdehyde dehydrogenase, dimerisation domain B856_05815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) B856_05820 PF00291 Pyridoxal-phosphate dependent enzyme B856_05820 PF00585 C-terminal regulatory domain of Threonine dehydratase B856_05825 PF02254 TrkA-N domain B856_05825 PF02080 TrkA-C domain B856_05830 PF02386 Cation transport protein B856_05835 PF02253 Phospholipase A1 B856_05840 PF08367 Peptidase M16C associated B856_05840 PF00675 Insulinase (Peptidase family M16) B856_05840 PF05193 Peptidase M16 inactive domain B856_05845 PF00593 TonB dependent receptor B856_05845 PF07715 TonB-dependent Receptor Plug Domain B856_05850 PF00294 pfkB family carbohydrate kinase B856_05860 PF07290 Protein of unknown function (DUF1449) B856_05870 PF01654 Cytochrome bd terminal oxidase subunit I B856_05875 PF02322 Cytochrome bd terminal oxidase subunit II B856_05895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) B856_05905 PF02881 SRP54-type protein, helical bundle domain B856_05905 PF00448 SRP54-type protein, GTPase domain B856_05935 PF00571 CBS domain B856_05935 PF00478 IMP dehydrogenase / GMP reductase domain B856_05940 PF00202 Aminotransferase class-III B856_05945 PF00462 Glutaredoxin B856_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05955 PF03466 LysR substrate binding domain B856_05960 PF00557 Metallopeptidase family M24 B856_05965 PF05525 Branched-chain amino acid transport protein B856_05990 PF00381 PTS HPr component phosphorylation site B856_05990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B856_05990 PF05524 PEP-utilising enzyme, N-terminal B856_05990 PF00391 PEP-utilising enzyme, mobile domain B856_05990 PF02896 PEP-utilising enzyme, TIM barrel domain B856_05995 PF00294 pfkB family carbohydrate kinase B856_06000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B856_06000 PF02378 Phosphotransferase system, EIIC B856_06025 PF03707 Bacterial signalling protein N terminal repeat B856_06025 PF00563 EAL domain B856_06025 PF00990 Diguanylate cyclase, GGDEF domain B856_06035 PF07995 Glucose / Sorbosone dehydrogenase B856_06040 PF02586 SOS response associated peptidase (SRAP) B856_06045 PF01740 STAS domain B856_06045 PF00916 Sulfate permease family B856_06050 PF05922 Peptidase inhibitor I9 B856_06050 PF00082 Subtilase family B856_06060 PF00324 Amino acid permease B856_06065 PF00266 Aminotransferase class-V B856_06070 PF01037 Lrp/AsnC ligand binding domain B856_06095 PF13419 Haloacid dehalogenase-like hydrolase B856_06100 PF01479 S4 domain B856_06105 PF00154 recA bacterial DNA recombination protein B856_06110 PF02631 RecX family B856_06120 PF00132 Bacterial transferase hexapeptide (six repeats) B856_06120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B856_06125 PF07977 FabA-like domain B856_06130 PF00132 Bacterial transferase hexapeptide (six repeats) B856_06130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B856_06140 PF01103 Surface antigen B856_06140 PF07244 Surface antigen variable number repeat B856_06145 PF13180 PDZ domain B856_06145 PF17820 PDZ domain B856_06145 PF02163 Peptidase family M50 B856_06150 PF13288 DXP reductoisomerase C-terminal domain B856_06150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase B856_06150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain B856_06160 PF01255 Putative undecaprenyl diphosphate synthase B856_06165 PF01765 Ribosome recycling factor B856_06170 PF00696 Amino acid kinase family B856_06175 PF18693 TRAM domain B856_06175 PF00919 Uncharacterized protein family UPF0004 B856_06175 PF04055 Radical SAM superfamily B856_06180 PF00512 His Kinase A (phospho-acceptor) domain B856_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_06180 PF00989 PAS fold B856_06185 PF00072 Response regulator receiver domain B856_06185 PF00158 Sigma-54 interaction domain B856_06185 PF02954 Bacterial regulatory protein, Fis family B856_06190 PF00440 Bacterial regulatory proteins, tetR family B856_06195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B856_06195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B856_06205 PF02542 YgbB family B856_06215 PF01266 FAD dependent oxidoreductase B856_06235 PF10415 Fumarase C C-terminus B856_06235 PF00206 Lyase B856_06240 PF16363 GDP-mannose 4,6 dehydratase B856_06245 PF02635 DsrE/DsrF-like family B856_06265 PF00892 EamA-like transporter family B856_06270 PF00392 Bacterial regulatory proteins, gntR family B856_06270 PF00155 Aminotransferase class I and II B856_06275 PF01638 HxlR-like helix-turn-helix B856_06280 PF03454 MoeA C-terminal region (domain IV) B856_06280 PF03453 MoeA N-terminal region (domain I and II) B856_06280 PF00994 Probable molybdopterin binding domain B856_06285 PF00994 Probable molybdopterin binding domain B856_06285 PF01967 MoaC family B856_06290 PF02391 MoaE protein B856_06300 PF06463 Molybdenum Cofactor Synthesis C B856_06300 PF04055 Radical SAM superfamily B856_06305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_06305 PF00384 Molybdopterin oxidoreductase B856_06305 PF01568 Molydopterin dinucleotide binding domain B856_06310 PF12804 MobA-like NTP transferase domain B856_06315 PF01568 Molydopterin dinucleotide binding domain B856_06315 PF04324 BFD-like [2Fe-2S] binding domain B856_06315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_06315 PF00384 Molybdopterin oxidoreductase B856_06320 PF04324 BFD-like [2Fe-2S] binding domain B856_06320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B856_06320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B856_06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06320 PF18267 Rubredoxin NAD+ reductase C-terminal domain B856_06325 PF18267 Rubredoxin NAD+ reductase C-terminal domain B856_06325 PF13806 Rieske-like [2Fe-2S] domain B856_06325 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06325 PF04324 BFD-like [2Fe-2S] binding domain B856_06325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B856_06325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B856_06335 PF00486 Transcriptional regulatory protein, C terminal B856_06335 PF00072 Response regulator receiver domain B856_06340 PF00005 ABC transporter B856_06345 PF13438 Domain of unknown function (DUF4113) B856_06345 PF00817 impB/mucB/samB family B856_06345 PF11799 impB/mucB/samB family C-terminal domain B856_06350 PF01220 Dehydroquinase class II B856_06355 PF00364 Biotin-requiring enzyme B856_06360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_06360 PF00289 Biotin carboxylase, N-terminal domain B856_06360 PF02785 Biotin carboxylase C-terminal domain B856_06370 PF12832 MFS_1 like family B856_06380 PF13333 Integrase core domain B856_06380 PF13276 HTH-like domain B856_06380 PF00665 Integrase core domain B856_06425 PF00218 Indole-3-glycerol phosphate synthase B856_06430 PF02885 Glycosyl transferase family, helical bundle domain B856_06430 PF00591 Glycosyl transferase family, a/b domain B856_06435 PF00593 TonB dependent receptor B856_06435 PF07715 TonB-dependent Receptor Plug Domain B856_06440 PF01433 Peptidase family M1 domain B856_06440 PF11838 ERAP1-like C-terminal domain B856_06445 PF00117 Glutamine amidotransferase class-I B856_06455 PF00854 POT family B856_06465 PF04345 Chorismate lyase B856_06470 PF01040 UbiA prenyltransferase family B856_06505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B856_06505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B856_06510 PF01784 NIF3 (NGG1p interacting factor 3) B856_06515 PF13180 PDZ domain B856_06520 PF12627 Probable RNA and SrmB- binding site of polymerase A B856_06520 PF01743 Poly A polymerase head domain B856_06525 PF00390 Malic enzyme, N-terminal domain B856_06525 PF01515 Phosphate acetyl/butaryl transferase B856_06525 PF03949 Malic enzyme, NAD binding domain B856_06530 PF00563 EAL domain B856_06530 PF00990 Diguanylate cyclase, GGDEF domain B856_06530 PF03707 Bacterial signalling protein N terminal repeat B856_06535 PF04452 RNA methyltransferase B856_06540 PF02219 Methylenetetrahydrofolate reductase B856_06545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B856_06545 PF05221 S-adenosyl-L-homocysteine hydrolase B856_06560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_06560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_06560 PF09317 Domain of unknown function (DUF1974) B856_06565 PF04055 Radical SAM superfamily B856_06570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06585 PF07690 Major Facilitator Superfamily B856_06595 PF00557 Metallopeptidase family M24 B856_06600 PF00318 Ribosomal protein S2 B856_06605 PF00889 Elongation factor TS B856_06615 PF12833 Helix-turn-helix domain B856_06635 PF05036 Sporulation related domain B856_06635 PF03330 Lytic transglycolase B856_06640 PF13406 Transglycosylase SLT domain B856_06645 PF01098 Cell cycle protein B856_06655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term B856_06655 PF14489 QueF-like protein B856_06660 PF01061 ABC-2 type transporter B856_06665 PF00005 ABC transporter B856_06695 PF00464 Serine hydroxymethyltransferase B856_06700 PF02321 Outer membrane efflux protein B856_06705 PF00873 AcrB/AcrD/AcrF family B856_06710 PF13533 Biotin-lipoyl like B856_06715 PF03466 LysR substrate binding domain B856_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_06720 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_06725 PF00528 Binding-protein-dependent transport system inner membrane component B856_06730 PF00528 Binding-protein-dependent transport system inner membrane component B856_06735 PF00005 ABC transporter B856_06740 PF00893 Small Multidrug Resistance protein B856_06745 PF00037 4Fe-4S binding domain B856_06755 PF00392 Bacterial regulatory proteins, gntR family B856_06755 PF00155 Aminotransferase class I and II B856_06760 PF02567 Phenazine biosynthesis-like protein B856_06765 PF00175 Oxidoreductase NAD-binding domain B856_06765 PF00970 Oxidoreductase FAD-binding domain B856_06770 PF18389 TrmO C-terminal domain B856_06770 PF01980 tRNA-methyltransferase O B856_06780 PF00437 Type II/IV secretion system protein B856_06790 PF00486 Transcriptional regulatory protein, C terminal B856_06790 PF00072 Response regulator receiver domain B856_06795 PF08521 Two-component sensor kinase N-terminal B856_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_06795 PF00512 His Kinase A (phospho-acceptor) domain B856_06805 PF00293 NUDIX domain B856_06815 PF14814 Bifunctional transglycosylase second domain B856_06815 PF00905 Penicillin binding protein transpeptidase domain B856_06815 PF00912 Transglycosylase B856_06820 PF01513 ATP-NAD kinase B856_06825 PF07023 Protein of unknown function (DUF1315) B856_06830 PF00591 Glycosyl transferase family, a/b domain B856_06830 PF02885 Glycosyl transferase family, helical bundle domain B856_06835 PF00375 Sodium:dicarboxylate symporter family B856_06840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_06840 PF02770 Acyl-CoA dehydrogenase, middle domain B856_06840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_06845 PF00756 Putative esterase B856_06850 PF00800 Prephenate dehydratase B856_06850 PF01842 ACT domain B856_06850 PF01817 Chorismate mutase type II B856_06855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B856_06865 PF01546 Peptidase family M20/M25/M40 B856_06865 PF07687 Peptidase dimerisation domain B856_06870 PF12706 Beta-lactamase superfamily domain B856_06880 PF03883 Peroxide stress protein YaaA B856_06890 PF05690 Thiazole biosynthesis protein ThiG B856_06900 PF04241 Protein of unknown function (DUF423) B856_06905 PF04542 Sigma-70 region 2 B856_06905 PF00140 Sigma-70 factor, region 1.2 B856_06905 PF04545 Sigma-70, region 4 B856_06915 PF00313 'Cold-shock' DNA-binding domain B856_06920 PF00270 DEAD/DEAH box helicase B856_06920 PF00271 Helicase conserved C-terminal domain B856_06930 PF00881 Nitroreductase family B856_06935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B856_06935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B856_06955 PF01180 Dihydroorotate dehydrogenase B856_06960 PF02674 Colicin V production protein B856_06965 PF00156 Phosphoribosyl transferase domain B856_06980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_06980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_06985 PF01435 Peptidase family M48 B856_06990 PF09424 Yqey-like protein B856_06995 PF01165 Ribosomal protein S21 B856_07000 PF00814 Glycoprotease family B856_07020 PF00069 Protein kinase domain B856_07050 PF13360 PQQ-like domain B856_07050 PF01011 PQQ enzyme repeat B856_07120 PF13755 Sensor N-terminal transmembrane domain B856_07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07120 PF00512 His Kinase A (phospho-acceptor) domain B856_07120 PF00672 HAMP domain B856_07120 PF13756 Stimulus-sensing domain B856_07130 PF00268 Ribonucleotide reductase, small chain B856_07140 PF00317 Ribonucleotide reductase, all-alpha domain B856_07140 PF03477 ATP cone domain B856_07140 PF02867 Ribonucleotide reductase, barrel domain B856_07150 PF00072 Response regulator receiver domain B856_07150 PF00486 Transcriptional regulatory protein, C terminal B856_07155 PF00512 His Kinase A (phospho-acceptor) domain B856_07155 PF00672 HAMP domain B856_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07165 PF17151 Periplasmic sensor domain B856_07165 PF00990 Diguanylate cyclase, GGDEF domain B856_07170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 B856_07175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B856_07180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit B856_07180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit B856_07190 PF10531 SLBB domain B856_07190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B856_07190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit B856_07195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B856_07195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_07195 PF00384 Molybdopterin oxidoreductase B856_07200 PF00146 NADH dehydrogenase B856_07205 PF12838 4Fe-4S dicluster domain B856_07210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 B856_07215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B856_07220 PF00361 Proton-conducting membrane transporter B856_07220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B856_07225 PF00361 Proton-conducting membrane transporter B856_07230 PF00361 Proton-conducting membrane transporter B856_07240 PF00313 'Cold-shock' DNA-binding domain B856_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_07245 PF03466 LysR substrate binding domain B856_07250 PF00970 Oxidoreductase FAD-binding domain B856_07250 PF00175 Oxidoreductase NAD-binding domain B856_07265 PF05552 Conserved TM helix B856_07280 PF00291 Pyridoxal-phosphate dependent enzyme B856_07285 PF13533 Biotin-lipoyl like B856_07310 PF01588 Putative tRNA binding domain B856_07310 PF09334 tRNA synthetases class I (M) B856_07320 PF10609 NUBPL iron-transfer P-loop NTPase B856_07325 PF01048 Phosphorylase superfamily B856_07340 PF00692 dUTPase B856_07370 PF01207 Dihydrouridine synthase (Dus) B856_07380 PF00448 SRP54-type protein, GTPase domain B856_07380 PF02978 Signal peptide binding domain B856_07380 PF02881 SRP54-type protein, helical bundle domain B856_07385 PF03309 Type III pantothenate kinase B856_07395 PF01925 Sulfite exporter TauE/SafE B856_07405 PF06470 SMC proteins Flexible Hinge Domain B856_07405 PF02463 RecF/RecN/SMC N terminal domain B856_07415 PF00533 BRCA1 C Terminus (BRCT) domain B856_07415 PF01653 NAD-dependent DNA ligase adenylation domain B856_07415 PF03120 NAD-dependent DNA ligase OB-fold domain B856_07415 PF12826 Helix-hairpin-helix motif B856_07415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain B856_07420 PF00210 Ferritin-like domain B856_07425 PF07690 Major Facilitator Superfamily B856_07430 PF00982 Glycosyltransferase family 20 B856_07435 PF02358 Trehalose-phosphatase B856_07440 PF12697 Alpha/beta hydrolase family B856_07440 PF08241 Methyltransferase domain B856_07445 PF06968 Biotin and Thiamin Synthesis associated domain B856_07445 PF00202 Aminotransferase class-III B856_07445 PF04055 Radical SAM superfamily B856_07450 PF00155 Aminotransferase class I and II B856_07465 PF01479 S4 domain B856_07465 PF00849 RNA pseudouridylate synthase B856_07470 PF04079 Segregation and condensation complex subunit ScpB B856_07475 PF02616 Segregation and condensation protein ScpA B856_07480 PF01300 Telomere recombination B856_07485 PF04315 Elongation factor P hydroxylase B856_07490 PF02620 Large ribosomal RNA subunit accumulation protein YceD B856_07495 PF01783 Ribosomal L32p protein family B856_07500 PF00698 Acyl transferase domain B856_07510 PF00550 Phosphopantetheine attachment site B856_07515 PF04972 BON domain B856_07515 PF01476 LysM domain B856_07520 PF02581 Thiamine monophosphate synthase B856_07520 PF03070 TENA/THI-4/PQQC family B856_07520 PF08543 Phosphomethylpyrimidine kinase B856_07530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B856_07545 PF02261 Aspartate decarboxylase B856_07550 PF01195 Peptidyl-tRNA hydrolase B856_07555 PF01386 Ribosomal L25p family B856_07560 PF14572 Phosphoribosyl synthetase-associated domain B856_07560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B856_07565 PF00920 Dehydratase family B856_07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_07575 PF03466 LysR substrate binding domain B856_07580 PF01370 NAD dependent epimerase/dehydratase family B856_07585 PF07690 Major Facilitator Superfamily B856_07590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_07590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_07595 PF12833 Helix-turn-helix domain B856_07595 PF06719 AraC-type transcriptional regulator N-terminus B856_07610 PF08240 Alcohol dehydrogenase GroES-like domain B856_07610 PF00107 Zinc-binding dehydrogenase B856_07625 PF00005 ABC transporter B856_07645 PF14572 Phosphoribosyl synthetase-associated domain B856_07645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B856_07650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B856_07725 PF00196 Bacterial regulatory proteins, luxR family B856_07730 PF01425 Amidase B856_07735 PF13533 Biotin-lipoyl like B856_07740 PF07690 Major Facilitator Superfamily B856_07765 PF01975 Survival protein SurE B856_07775 PF02824 TGS domain B856_07775 PF13291 ACT domain B856_07775 PF04607 Region found in RelA / SpoT proteins B856_07830 PF12146 Serine aminopeptidase, S33 B856_07835 PF12833 Helix-turn-helix domain B856_07835 PF02311 AraC-like ligand binding domain B856_07845 PF16527 Two-component sensor protein CpxA, periplasmic domain B856_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07845 PF00672 HAMP domain B856_07845 PF00512 His Kinase A (phospho-acceptor) domain B856_07850 PF00486 Transcriptional regulatory protein, C terminal B856_07850 PF00072 Response regulator receiver domain B856_07855 PF00529 HlyD membrane-fusion protein of T1SS B856_07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_07860 PF00873 AcrB/AcrD/AcrF family B856_07865 PF02321 Outer membrane efflux protein B856_07870 PF12146 Serine aminopeptidase, S33 B856_07875 PF00743 Flavin-binding monooxygenase-like B856_07880 PF01593 Flavin containing amine oxidoreductase B856_07895 PF01266 FAD dependent oxidoreductase B856_07915 PF16970 Type-1 fimbrial protein, A B856_07940 PF00199 Catalase B856_07945 PF01292 Prokaryotic cytochrome b561 B856_07965 PF12697 Alpha/beta hydrolase family B856_07970 PF01613 Flavin reductase like domain B856_07975 PF00296 Luciferase-like monooxygenase B856_07980 PF00171 Aldehyde dehydrogenase family B856_07990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_08000 PF00171 Aldehyde dehydrogenase family B856_08005 PF02627 Carboxymuconolactone decarboxylase family B856_08010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08010 PF03466 LysR substrate binding domain B856_08015 PF02525 Flavodoxin-like fold B856_08020 PF09339 IclR helix-turn-helix domain B856_08020 PF01614 Bacterial transcriptional regulator B856_08025 PF01494 FAD binding domain B856_08030 PF07702 UTRA domain B856_08030 PF00392 Bacterial regulatory proteins, gntR family B856_08040 PF08402 TOBE domain B856_08040 PF00005 ABC transporter B856_08045 PF00528 Binding-protein-dependent transport system inner membrane component B856_08050 PF01266 FAD dependent oxidoreductase B856_08055 PF00266 Aminotransferase class-V B856_08060 PF13419 Haloacid dehalogenase-like hydrolase B856_08065 PF07690 Major Facilitator Superfamily B856_08070 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08075 PF02515 CoA-transferase family III B856_08085 PF09339 IclR helix-turn-helix domain B856_08090 PF00378 Enoyl-CoA hydratase/isomerase B856_08095 PF03060 Nitronate monooxygenase B856_08100 PF07690 Major Facilitator Superfamily B856_08105 PF09339 IclR helix-turn-helix domain B856_08110 PF00108 Thiolase, N-terminal domain B856_08110 PF02803 Thiolase, C-terminal domain B856_08115 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain B856_08115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_08115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_08125 PF00378 Enoyl-CoA hydratase/isomerase B856_08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08130 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08135 PF07690 Major Facilitator Superfamily B856_08140 PF01144 Coenzyme A transferase B856_08145 PF01144 Coenzyme A transferase B856_08155 PF07690 Major Facilitator Superfamily B856_08165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08165 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08165 PF12806 Acetyl-CoA dehydrogenase C-terminal like B856_08165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08180 PF03466 LysR substrate binding domain B856_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08185 PF00682 HMGL-like B856_08190 PF02785 Biotin carboxylase C-terminal domain B856_08190 PF00289 Biotin carboxylase, N-terminal domain B856_08190 PF00364 Biotin-requiring enzyme B856_08190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_08195 PF00378 Enoyl-CoA hydratase/isomerase B856_08200 PF01039 Carboxyl transferase domain B856_08205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08205 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08210 PF00440 Bacterial regulatory proteins, tetR family B856_08215 PF13193 AMP-binding enzyme C-terminal domain B856_08215 PF00501 AMP-binding enzyme B856_08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08235 PF03466 LysR substrate binding domain B856_08270 PF18146 Damage-inducible protein CinA KH domain B856_08270 PF00994 Probable molybdopterin binding domain B856_08270 PF02464 Competence-damaged protein B856_08280 PF00199 Catalase B856_08280 PF06628 Catalase-related immune-responsive B856_08280 PF18011 C-terminal domain found in long catalases B856_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08300 PF03466 LysR substrate binding domain B856_08305 PF00106 short chain dehydrogenase B856_08310 PF04055 Radical SAM superfamily B856_08310 PF06969 HemN C-terminal domain B856_08320 PF01554 MatE B856_08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_08325 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_08330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08335 PF03109 ABC1 family B856_08340 PF01197 Ribosomal protein L31 B856_08350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) B856_08370 PF03884 DNA gyrase inhibitor YacG B856_08375 PF00753 Metallo-beta-lactamase superfamily B856_08380 PF00762 Ferrochelatase B856_08390 PF01177 Asp/Glu/Hydantoin racemase B856_08405 PF01206 Sulfurtransferase TusA B856_08410 PF03471 Transporter associated domain B856_08410 PF00571 CBS domain B856_08415 PF00795 Carbon-nitrogen hydrolase B856_08420 PF01588 Putative tRNA binding domain B856_08430 PF07963 Prokaryotic N-terminal methylation motif B856_08430 PF08334 Type II secretion system (T2SS), protein G B856_08435 PF00482 Type II secretion system (T2SS), protein F B856_08440 PF17764 3′ DNA-binding domain (3′BD) B856_08440 PF18074 Primosomal protein N C-terminal domain B856_08440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain B856_08440 PF00270 DEAD/DEAH box helicase B856_08440 PF00271 Helicase conserved C-terminal domain B856_08445 PF02254 TrkA-N domain B856_08445 PF00999 Sodium/hydrogen exchanger family B856_08450 PF01430 Hsp33 protein B856_08460 PF01556 DnaJ C terminal domain B856_08460 PF00226 DnaJ domain B856_08470 PF01544 CorA-like Mg2+ transporter protein B856_08475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B856_08475 PF00013 KH domain B856_08475 PF03725 3' exoribonuclease family, domain 2 B856_08475 PF00575 S1 RNA binding domain B856_08475 PF01138 3' exoribonuclease family, domain 1 B856_08480 PF00312 Ribosomal protein S15 B856_08490 PF13538 UvrD-like helicase C-terminal domain B856_08495 PF00580 UvrD/REP helicase N-terminal domain B856_08495 PF12705 PD-(D/E)XK nuclease superfamily B856_08495 PF13361 UvrD-like helicase C-terminal domain B856_08500 PF17946 RecC C-terminal domain B856_08510 PF03976 Polyphosphate kinase 2 (PPK2) B856_08520 PF01209 ubiE/COQ5 methyltransferase family B856_08530 PF03109 ABC1 family B856_08535 PF01494 FAD binding domain B856_08540 PF01502 Phosphoribosyl-AMP cyclohydrolase B856_08555 PF13244 Domain of unknown function (DUF4040) B856_08555 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter B856_08555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B856_08555 PF00361 Proton-conducting membrane transporter B856_08560 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B856_08565 PF00361 Proton-conducting membrane transporter B856_08575 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) B856_08585 PF02033 Ribosome-binding factor A B856_08590 PF04760 Translation initiation factor IF-2, N-terminal region B856_08590 PF08364 Bacterial translation initiation factor IF-2 associated region B856_08590 PF11987 Translation-initiation factor 2 B856_08590 PF00009 Elongation factor Tu GTP binding domain B856_08595 PF08529 NusA N-terminal domain B856_08595 PF00575 S1 RNA binding domain B856_08595 PF13184 NusA-like KH domain B856_08600 PF17384 RimP C-terminal SH3 domain B856_08600 PF02576 RimP N-terminal domain B856_08620 PF03840 Preprotein translocase SecG subunit B856_08625 PF00121 Triosephosphate isomerase B856_08630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B856_08630 PF00437 Type II/IV secretion system protein B856_08635 PF00482 Type II secretion system (T2SS), protein F B856_08640 PF01478 Type IV leader peptidase family B856_08640 PF06750 Bacterial Peptidase A24 N-terminal domain B856_08645 PF01121 Dephospho-CoA kinase B856_08655 PF08032 RNA 2'-O ribose methyltransferase substrate binding B856_08655 PF00588 SpoU rRNA Methylase family B856_08660 PF06865 Pyrimidine/purine nucleoside phosphorylase B856_08670 PF02463 RecF/RecN/SMC N terminal domain B856_08675 PF02622 Uncharacterized ACR, COG1678 B856_08680 PF03652 Holliday junction resolvase B856_08685 PF13533 Biotin-lipoyl like B856_08710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B856_08710 PF12833 Helix-turn-helix domain B856_08710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_08710 PF02805 Metal binding domain of Ada B856_08715 PF01066 CDP-alcohol phosphatidyltransferase B856_08725 PF08459 UvrC Helix-hairpin-helix N-terminal B856_08725 PF01541 GIY-YIG catalytic domain B856_08725 PF02151 UvrB/uvrC motif B856_08750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_08750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_08750 PF00378 Enoyl-CoA hydratase/isomerase B856_08755 PF02803 Thiolase, C-terminal domain B856_08755 PF00108 Thiolase, N-terminal domain B856_08775 PF00376 MerR family regulatory protein B856_08775 PF09278 MerR, DNA binding B856_08785 PF01323 DSBA-like thioredoxin domain B856_08800 PF00183 Hsp90 protein B856_08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_08815 PF03553 Na+/H+ antiporter family B856_08815 PF13726 Na+-H+ antiporter family B856_08820 PF00561 alpha/beta hydrolase fold B856_08840 PF05000 RNA polymerase Rpb1, domain 4 B856_08840 PF04998 RNA polymerase Rpb1, domain 5 B856_08840 PF00623 RNA polymerase Rpb1, domain 2 B856_08840 PF04997 RNA polymerase Rpb1, domain 1 B856_08840 PF04983 RNA polymerase Rpb1, domain 3 B856_08845 PF04561 RNA polymerase Rpb2, domain 2 B856_08845 PF00562 RNA polymerase Rpb2, domain 6 B856_08845 PF04560 RNA polymerase Rpb2, domain 7 B856_08845 PF04565 RNA polymerase Rpb2, domain 3 B856_08845 PF04563 RNA polymerase beta subunit B856_08845 PF10385 RNA polymerase beta subunit external 1 domain B856_08850 PF16320 Ribosomal protein L7/L12 dimerisation domain B856_08850 PF00542 Ribosomal protein L7/L12 C-terminal domain B856_08855 PF00466 Ribosomal protein L10 B856_08860 PF00687 Ribosomal protein L1p/L10e family B856_08865 PF00298 Ribosomal protein L11, RNA binding domain B856_08865 PF03946 Ribosomal protein L11, N-terminal domain B856_08870 PF00467 KOW motif B856_08870 PF02357 Transcription termination factor nusG B856_08875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B856_08900 PF01545 Cation efflux family B856_08905 PF00873 AcrB/AcrD/AcrF family B856_08910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_08910 PF00529 HlyD membrane-fusion protein of T1SS B856_08930 PF04191 Phospholipid methyltransferase B856_08960 PF00005 ABC transporter B856_08960 PF12848 ABC transporter B856_08965 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_08970 PF00106 short chain dehydrogenase B856_08975 PF01740 STAS domain B856_08975 PF00916 Sulfate permease family B856_08980 PF16921 Tex protein YqgF-like domain B856_08980 PF09371 Tex-like protein N-terminal domain B856_08980 PF17674 HHH domain B856_08980 PF00575 S1 RNA binding domain B856_08985 PF00072 Response regulator receiver domain B856_08985 PF00486 Transcriptional regulatory protein, C terminal B856_08990 PF00512 His Kinase A (phospho-acceptor) domain B856_08990 PF00672 HAMP domain B856_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_08995 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain B856_08995 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain B856_09000 PF00583 Acetyltransferase (GNAT) family B856_09005 PF12343 Cold shock protein DEAD box A B856_09005 PF03880 DbpA RNA binding domain B856_09005 PF00271 Helicase conserved C-terminal domain B856_09005 PF00270 DEAD/DEAH box helicase B856_09010 PF00459 Inositol monophosphatase family B856_09015 PF02780 Transketolase, C-terminal domain B856_09015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase B856_09015 PF02779 Transketolase, pyrimidine binding domain B856_09020 PF00925 GTP cyclohydrolase II B856_09025 PF01218 Coproporphyrinogen III oxidase B856_09030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain B856_09030 PF01488 Shikimate / quinate 5-dehydrogenase B856_09030 PF08501 Shikimate dehydrogenase substrate binding domain B856_09040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_09040 PF02770 Acyl-CoA dehydrogenase, middle domain B856_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_09040 PF12806 Acetyl-CoA dehydrogenase C-terminal like B856_09050 PF04024 PspC domain B856_09055 PF00571 CBS domain B856_09080 PF02091 Glycyl-tRNA synthetase alpha subunit B856_09085 PF02092 Glycyl-tRNA synthetase beta subunit B856_09085 PF05746 DALR anticodon binding domain B856_09095 PF00892 EamA-like transporter family B856_09100 PF03466 LysR substrate binding domain B856_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_09130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family B856_09135 PF04996 Succinylarginine dihydrolase B856_09140 PF00171 Aldehyde dehydrogenase family B856_09145 PF04958 Arginine N-succinyltransferase beta subunit B856_09150 PF00202 Aminotransferase class-III B856_09155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_09155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B856_09165 PF00324 Amino acid permease B856_09195 PF13614 AAA domain B856_09200 PF01594 AI-2E family transporter B856_09205 PF00080 Copper/zinc superoxide dismutase (SODC) B856_09210 PF12805 FUSC-like inner membrane protein yccS B856_09215 PF07690 Major Facilitator Superfamily B856_09225 PF02525 Flavodoxin-like fold B856_09230 PF03992 Antibiotic biosynthesis monooxygenase B856_09240 PF01565 FAD binding domain B856_09240 PF02913 FAD linked oxidases, C-terminal domain B856_09245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_09245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_09250 PF00892 EamA-like transporter family B856_09255 PF00892 EamA-like transporter family B856_09265 PF01925 Sulfite exporter TauE/SafE B856_09270 PF09157 Pseudouridine synthase II TruB, C-terminal B856_09270 PF01509 TruB family pseudouridylate synthase (N terminal domain) B856_09270 PF16198 tRNA pseudouridylate synthase B C-terminal domain B856_09275 PF03280 Proteobacterial lipase chaperone protein B856_09280 PF00561 alpha/beta hydrolase fold B856_09285 PF01245 Ribosomal protein L19 B856_09290 PF01746 tRNA (Guanine-1)-methyltransferase B856_09295 PF05239 PRC-barrel domain B856_09295 PF01782 RimM N-terminal domain B856_09300 PF00886 Ribosomal protein S16 B856_09340 PF02401 LytB protein B856_09345 PF00625 Guanylate kinase B856_09350 PF01192 RNA polymerase Rpb6 B856_09355 PF02824 TGS domain B856_09355 PF13291 ACT domain B856_09355 PF04607 Region found in RelA / SpoT proteins B856_09360 PF01042 Endoribonuclease L-PSP B856_09365 PF04324 BFD-like [2Fe-2S] binding domain B856_09370 PF00210 Ferritin-like domain B856_09375 PF04932 O-Antigen ligase B856_09375 PF11846 Virulence factor membrane-bound polymerase, C-terminal B856_09375 PF15864 Protein glycosylation ligase B856_09395 PF04536 TPM domain B856_09400 PF04011 LemA family B856_09410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B856_09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_09415 PF01645 Conserved region in glutamate synthase B856_09415 PF01493 GXGXG motif B856_09415 PF00310 Glutamine amidotransferases class-II B856_09415 PF04898 Glutamate synthase central domain B856_09425 PF01761 3-dehydroquinate synthase B856_09430 PF01202 Shikimate kinase B856_09435 PF07660 Secretin and TonB N terminus short domain B856_09435 PF11741 AMIN domain B856_09435 PF00263 Bacterial type II and III secretion system protein B856_09435 PF03958 Bacterial type II/III secretion system short domain B856_09460 PF17092 Penicillin-binding protein OB-like domain B856_09460 PF00912 Transglycosylase B856_09460 PF00905 Penicillin binding protein transpeptidase domain B856_09465 PF13847 Methyltransferase domain B856_09475 PF00953 Glycosyl transferase family 4 B856_09480 PF01225 Mur ligase family, catalytic domain B856_09480 PF02875 Mur ligase family, glutamate ligase domain B856_09480 PF08245 Mur ligase middle domain B856_09485 PF02875 Mur ligase family, glutamate ligase domain B856_09485 PF01225 Mur ligase family, catalytic domain B856_09485 PF08245 Mur ligase middle domain B856_09490 PF03717 Penicillin-binding Protein dimerisation domain B856_09490 PF00905 Penicillin binding protein transpeptidase domain B856_09500 PF01795 MraW methylase family B856_09515 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_09535 PF00324 Amino acid permease B856_09545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B856_09550 PF07859 alpha/beta hydrolase fold B856_09570 PF03466 LysR substrate binding domain B856_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_09575 PF01025 GrpE B856_09585 PF00012 Hsp70 protein B856_09605 PF13406 Transglycosylase SLT domain B856_09610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain B856_09610 PF02222 ATP-grasp domain B856_09615 PF00731 AIR carboxylase B856_09630 PF08245 Mur ligase middle domain B856_09630 PF02875 Mur ligase family, glutamate ligase domain B856_09630 PF01225 Mur ligase family, catalytic domain B856_09640 PF01569 PAP2 superfamily B856_09645 PF03741 Integral membrane protein TerC family B856_09655 PF03738 Glutathionylspermidine synthase preATP-grasp B856_09660 PF00355 Rieske [2Fe-2S] domain B856_09665 PF01979 Amidohydrolase family B856_09675 PF00156 Phosphoribosyl transferase domain B856_09685 PF13098 Thioredoxin-like domain B856_09685 PF10411 Disulfide bond isomerase protein N-terminus B856_09690 PF16916 Dimerisation domain of Zinc Transporter B856_09690 PF01545 Cation efflux family B856_09695 PF02583 Metal-sensitive transcriptional repressor B856_09700 PF12631 MnmE helical domain B856_09700 PF01926 50S ribosome-binding GTPase B856_09700 PF10396 GTP-binding protein TrmE N-terminus B856_09705 PF02096 60Kd inner membrane protein B856_09705 PF14849 YidC periplasmic domain B856_09710 PF01809 Putative membrane protein insertion efficiency factor B856_09715 PF00825 Ribonuclease P B856_09720 PF00468 Ribosomal protein L34 B856_09725 PF11638 DnaA N-terminal domain B856_09725 PF00308 Bacterial dnaA protein B856_09725 PF08299 Bacterial dnaA protein helix-turn-helix B856_09730 PF00712 DNA polymerase III beta subunit, N-terminal domain B856_09730 PF02767 DNA polymerase III beta subunit, central domain B856_09730 PF02768 DNA polymerase III beta subunit, C-terminal domain B856_09735 PF02463 RecF/RecN/SMC N terminal domain B856_09740 PF00986 DNA gyrase B subunit, carboxyl terminus B856_09740 PF18053 DNA gyrase B subunit insert domain B856_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_09740 PF01751 Toprim domain B856_09740 PF00204 DNA gyrase B B856_09750 PF09335 SNARE associated Golgi protein B856_09755 PF00005 ABC transporter B856_09755 PF12848 ABC transporter B856_09775 PF01521 Iron-sulphur cluster biosynthesis B856_09780 PF00561 alpha/beta hydrolase fold B856_09785 PF03702 Anhydro-N-acetylmuramic acid kinase B856_09790 PF00579 tRNA synthetases class I (W and Y) B856_09800 PF00920 Dehydratase family B856_09805 PF01081 KDPG and KHG aldolase B856_09810 PF02447 GntP family permease B856_09815 PF01202 Shikimate kinase B856_09820 PF00171 Aldehyde dehydrogenase family B856_09825 PF00171 Aldehyde dehydrogenase family B856_09830 PF00561 alpha/beta hydrolase fold B856_09840 PF00933 Glycosyl hydrolase family 3 N terminal domain B856_09845 PF17804 Tail specific protease N-terminal domain B856_09845 PF03572 Peptidase family S41 B856_09845 PF00595 PDZ domain B856_09845 PF11818 C-terminal domain of tail specific protease (DUF3340) B856_09850 PF00534 Glycosyl transferases group 1 B856_09850 PF13439 Glycosyltransferase Family 4 B856_09855 PF01569 PAP2 superfamily B856_09860 PF04384 Iron-sulphur cluster assembly B856_09865 PF00334 Nucleoside diphosphate kinase B856_09870 PF04055 Radical SAM superfamily B856_09880 PF13464 Domain of unknown function (DUF4115) B856_09885 PF04551 GcpE protein B856_09890 PF13393 Histidyl-tRNA synthetase B856_09890 PF03129 Anticodon binding domain B856_09900 PF13360 PQQ-like domain B856_09905 PF01926 50S ribosome-binding GTPase B856_09905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B856_09920 PF00550 Phosphopantetheine attachment site B856_09925 PF00550 Phosphopantetheine attachment site B856_09935 PF13193 AMP-binding enzyme C-terminal domain B856_09935 PF00501 AMP-binding enzyme B856_09950 PF00221 Aromatic amino acid lyase B856_09970 PF04820 Tryptophan halogenase B856_09980 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_09980 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_09995 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_09995 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_10010 PF02556 Preprotein translocase subunit SecB B856_10015 PF00462 Glutaredoxin B856_10025 PF03193 RsgA GTPase B856_10030 PF00929 Exonuclease B856_10045 PF02321 Outer membrane efflux protein B856_10050 PF02687 FtsX-like permease family B856_10050 PF00005 ABC transporter B856_10050 PF12704 MacB-like periplasmic core domain B856_10055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_10070 PF08264 Anticodon-binding domain of tRNA B856_10070 PF00133 tRNA synthetases class I (I, L, M and V) B856_10070 PF13603 Leucyl-tRNA synthetase, Domain 2 B856_10070 PF09334 tRNA synthetases class I (M) B856_10080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_10080 PF00205 Thiamine pyrophosphate enzyme, central domain B856_10080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_10085 PF10369 Small subunit of acetolactate synthase B856_10090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain B856_10090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain B856_10095 PF03707 Bacterial signalling protein N terminal repeat B856_10095 PF00990 Diguanylate cyclase, GGDEF domain B856_10095 PF00563 EAL domain B856_10115 PF03144 Elongation factor Tu domain 2 B856_10115 PF00009 Elongation factor Tu GTP binding domain B856_10115 PF16658 Class II release factor RF3, C-terminal domain B856_10130 PF01026 TatD related DNase B856_10135 PF00330 Aconitase family (aconitate hydratase) B856_10135 PF00694 Aconitase C-terminal domain B856_10145 PF00899 ThiF family B856_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_10150 PF03466 LysR substrate binding domain B856_10160 PF01207 Dihydrouridine synthase (Dus) B856_10165 PF07690 Major Facilitator Superfamily B856_10175 PF00892 EamA-like transporter family B856_10180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B856_10180 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B856_10185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch B856_10190 PF02233 NAD(P) transhydrogenase beta subunit B856_10195 PF00106 short chain dehydrogenase B856_10205 PF01261 Xylose isomerase-like TIM barrel B856_10210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_10210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_10215 PF00378 Enoyl-CoA hydratase/isomerase B856_10220 PF01627 Hpt domain B856_10220 PF00672 HAMP domain B856_10220 PF00072 Response regulator receiver domain B856_10220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B856_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_10220 PF00512 His Kinase A (phospho-acceptor) domain B856_10225 PF00291 Pyridoxal-phosphate dependent enzyme B856_10235 PF05958 tRNA (Uracil-5-)-methyltransferase B856_10240 PF13291 ACT domain B856_10240 PF04607 Region found in RelA / SpoT proteins B856_10240 PF02824 TGS domain B856_10250 PF03819 MazG nucleotide pyrophosphohydrolase domain B856_10260 PF12626 Polymerase A arginine-rich C-terminus B856_10260 PF12627 Probable RNA and SrmB- binding site of polymerase A B856_10260 PF01743 Poly A polymerase head domain B856_10265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B856_10270 PF02548 Ketopantoate hydroxymethyltransferase B856_10275 PF02569 Pantoate-beta-alanine ligase B856_10280 PF03668 P-loop ATPase protein family B856_10285 PF00381 PTS HPr component phosphorylation site B856_10290 PF04751 Protein of unknown function (DUF615) B856_10295 PF00501 AMP-binding enzyme B856_10295 PF13193 AMP-binding enzyme C-terminal domain B856_10300 PF02824 TGS domain B856_10300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B856_10300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_10300 PF03129 Anticodon binding domain B856_10305 PF00707 Translation initiation factor IF-3, C-terminal domain B856_10305 PF05198 Translation initiation factor IF-3, N-terminal domain B856_10310 PF00043 Glutathione S-transferase, C-terminal domain B856_10310 PF02798 Glutathione S-transferase, N-terminal domain B856_10315 PF09335 SNARE associated Golgi protein B856_10320 PF07690 Major Facilitator Superfamily B856_10325 PF01632 Ribosomal protein L35 B856_10330 PF00453 Ribosomal protein L20 B856_10350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B856_10350 PF01409 tRNA synthetases class II core domain (F) B856_10355 PF03483 B3/4 domain B856_10355 PF03147 Ferredoxin-fold anticodon binding domain B856_10355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain B856_10355 PF03484 tRNA synthetase B5 domain B856_10355 PF01588 Putative tRNA binding domain B856_10360 PF00216 Bacterial DNA-binding protein B856_10370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_10370 PF07497 Rho termination factor, RNA-binding domain B856_10370 PF07498 Rho termination factor, N-terminal domain B856_10375 PF00085 Thioredoxin B856_10380 PF02541 Ppx/GppA phosphatase family B856_10385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit B856_10390 PF11734 TilS substrate C-terminal domain B856_10390 PF09179 TilS substrate binding domain B856_10390 PF01171 PP-loop family B856_10395 PF03807 NADP oxidoreductase coenzyme F420-dependent B856_10395 PF14748 Pyrroline-5-carboxylate reductase dimerisation B856_10400 PF02325 YGGT family B856_10405 PF01612 3'-5' exonuclease B856_10405 PF00476 DNA polymerase family A B856_10405 PF01367 5'-3' exonuclease, C-terminal SAM fold B856_10405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B856_10435 PF08461 Ribonuclease R winged-helix domain B856_10435 PF17876 Cold shock domain B856_10435 PF08206 Ribonuclease B OB domain B856_10435 PF00773 RNB domain B856_10435 PF00575 S1 RNA binding domain B856_10440 PF01432 Peptidase family M3 B856_10445 PF09526 Probable metal-binding protein (DUF2387) B856_10485 PF03937 Flavinator of succinate dehydrogenase B856_10490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_10490 PF02770 Acyl-CoA dehydrogenase, middle domain B856_10490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_10495 PF00743 Flavin-binding monooxygenase-like B856_10500 PF01196 Ribosomal protein L17 B856_10505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain B856_10505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain B856_10505 PF01000 RNA polymerase Rpb3/RpoA insert domain B856_10510 PF01479 S4 domain B856_10510 PF00163 Ribosomal protein S4/S9 N-terminal domain B856_10515 PF00411 Ribosomal protein S11 B856_10520 PF00416 Ribosomal protein S13/S18 B856_10525 PF00444 Ribosomal protein L36 B856_10530 PF00344 SecY translocase B856_10535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A B856_10540 PF00327 Ribosomal protein L30p/L7e B856_10545 PF00333 Ribosomal protein S5, N-terminal domain B856_10545 PF03719 Ribosomal protein S5, C-terminal domain B856_10550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast B856_10555 PF00347 Ribosomal protein L6 B856_10560 PF00410 Ribosomal protein S8 B856_10565 PF00253 Ribosomal protein S14p/S29e B856_10570 PF00281 Ribosomal protein L5 B856_10570 PF00673 ribosomal L5P family C-terminus B856_10575 PF00467 KOW motif B856_10575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 B856_10580 PF00238 Ribosomal protein L14p/L23e B856_10585 PF00366 Ribosomal protein S17 B856_10590 PF00831 Ribosomal L29 protein B856_10595 PF00252 Ribosomal protein L16p/L10e B856_10600 PF07650 KH domain B856_10600 PF00189 Ribosomal protein S3, C-terminal domain B856_10605 PF00237 Ribosomal protein L22p/L17e B856_10610 PF00203 Ribosomal protein S19 B856_10615 PF00181 Ribosomal Proteins L2, RNA binding domain B856_10615 PF03947 Ribosomal Proteins L2, C-terminal domain B856_10620 PF00276 Ribosomal protein L23 B856_10625 PF00573 Ribosomal protein L4/L1 family B856_10630 PF00297 Ribosomal protein L3 B856_10635 PF00338 Ribosomal protein S10p/S20e B856_10640 PF00117 Glutamine amidotransferase class-I B856_10645 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_10650 PF05872 Bacterial protein of unknown function (DUF853) B856_10655 PF00175 Oxidoreductase NAD-binding domain B856_10655 PF00042 Globin B856_10655 PF00970 Oxidoreductase FAD-binding domain B856_10660 PF02082 Transcriptional regulator B856_10665 PF01926 50S ribosome-binding GTPase B856_10675 PF00375 Sodium:dicarboxylate symporter family B856_10685 PF01553 Acyltransferase B856_10700 PF17191 RecG wedge domain B856_10700 PF00271 Helicase conserved C-terminal domain B856_10700 PF00270 DEAD/DEAH box helicase B856_10705 PF00156 Phosphoribosyl transferase domain B856_10710 PF00293 NUDIX domain B856_10715 PF03641 Possible lysine decarboxylase B856_10720 PF01544 CorA-like Mg2+ transporter protein B856_10730 PF05494 MlaC protein B856_10740 PF02405 Permease MlaE B856_10745 PF00005 ABC transporter B856_10760 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_10760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_10770 PF00753 Metallo-beta-lactamase superfamily B856_10770 PF04273 Putative phosphatase (DUF442) B856_10775 PF00561 alpha/beta hydrolase fold B856_10780 PF00085 Thioredoxin B856_10785 PF03061 Thioesterase superfamily B856_10795 PF04461 Protein of unknown function (DUF520) B856_10805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase B856_10805 PF01266 FAD dependent oxidoreductase B856_10815 PF03795 YCII-related domain B856_10820 PF04279 Intracellular septation protein A B856_10825 PF02811 PHP domain B856_10830 PF01062 Bestrophin, RFP-TM, chloride channel B856_10835 PF04002 RadC-like JAB domain B856_10840 PF04127 DNA / pantothenate metabolism flavoprotein B856_10840 PF02441 Flavoprotein B856_10845 PF02355 Protein export membrane protein B856_10845 PF07549 SecD/SecF GG Motif B856_10850 PF02355 Protein export membrane protein B856_10850 PF07549 SecD/SecF GG Motif B856_10850 PF13721 SecD export protein N-terminal TM region B856_10855 PF02699 Preprotein translocase subunit B856_10860 PF01702 Queuine tRNA-ribosyltransferase B856_10875 PF02547 Queuosine biosynthesis protein B856_10885 PF07689 KaiB domain B856_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_10885 PF00512 His Kinase A (phospho-acceptor) domain B856_10890 PF08335 GlnD PII-uridylyltransferase B856_10890 PF03710 Glutamate-ammonia ligase adenylyltransferase B856_10895 PF01063 Amino-transferase class IV B856_10910 PF01522 Polysaccharide deacetylase B856_10915 PF00535 Glycosyl transferase family 2 B856_10920 PF13439 Glycosyltransferase Family 4 B856_10920 PF00534 Glycosyl transferases group 1 B856_10945 PF17102 Stealth protein CR3, conserved region 3 B856_10945 PF11380 Stealth protein CR2, conserved region 2 B856_10945 PF17101 Stealth protein CR1, conserved region 1 B856_10950 PF01336 OB-fold nucleic acid binding domain B856_10950 PF00152 tRNA synthetases class II (D, K and N) B856_10950 PF02938 GAD domain B856_10960 PF00593 TonB dependent receptor B856_10960 PF07715 TonB-dependent Receptor Plug Domain B856_10980 PF06146 Phosphate-starvation-inducible E B856_10985 PF00043 Glutathione S-transferase, C-terminal domain B856_10985 PF02798 Glutathione S-transferase, N-terminal domain B856_10990 PF03466 LysR substrate binding domain B856_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_10995 PF12806 Acetyl-CoA dehydrogenase C-terminal like B856_10995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_10995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_10995 PF02770 Acyl-CoA dehydrogenase, middle domain B856_11000 PF02770 Acyl-CoA dehydrogenase, middle domain B856_11000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_11000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_11000 PF12806 Acetyl-CoA dehydrogenase C-terminal like B856_11010 PF00672 HAMP domain B856_11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_11010 PF00512 His Kinase A (phospho-acceptor) domain B856_11015 PF00486 Transcriptional regulatory protein, C terminal B856_11015 PF00072 Response regulator receiver domain B856_11020 PF02696 Uncharacterized ACR, YdiU/UPF0061 family B856_11040 PF01923 Cobalamin adenosyltransferase B856_11045 PF00593 TonB dependent receptor B856_11045 PF07715 TonB-dependent Receptor Plug Domain B856_11050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B856_11055 PF00291 Pyridoxal-phosphate dependent enzyme B856_11080 PF00290 Tryptophan synthase alpha chain B856_11085 PF01039 Carboxyl transferase domain B856_11090 PF02875 Mur ligase family, glutamate ligase domain B856_11090 PF08245 Mur ligase middle domain B856_11105 PF00753 Metallo-beta-lactamase superfamily B856_11110 PF10417 C-terminal domain of 1-Cys peroxiredoxin B856_11110 PF00578 AhpC/TSA family B856_11115 PF07516 SecA Wing and Scaffold domain B856_11115 PF01043 SecA preprotein cross-linking domain B856_11115 PF02810 SEC-C motif B856_11115 PF07517 SecA DEAD-like domain B856_11125 PF00083 Sugar (and other) transporter B856_11125 PF07690 Major Facilitator Superfamily B856_11130 PF03006 Haemolysin-III related B856_11155 PF00378 Enoyl-CoA hydratase/isomerase B856_11155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_11155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_11160 PF00108 Thiolase, N-terminal domain B856_11160 PF02803 Thiolase, C-terminal domain B856_11165 PF02311 AraC-like ligand binding domain B856_11165 PF12833 Helix-turn-helix domain B856_11170 PF02515 CoA-transferase family III B856_11175 PF04966 Carbohydrate-selective porin, OprB family B856_11180 PF01011 PQQ enzyme repeat B856_11185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B856_11185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B856_11195 PF00893 Small Multidrug Resistance protein B856_11205 PF02803 Thiolase, C-terminal domain B856_11205 PF00108 Thiolase, N-terminal domain B856_11215 PF00691 OmpA family B856_11215 PF13505 Outer membrane protein beta-barrel domain B856_11225 PF01139 tRNA-splicing ligase RtcB B856_11230 PF00324 Amino acid permease B856_11235 PF05175 Methyltransferase small domain B856_11235 PF08468 Methyltransferase small domain N-terminal B856_11240 PF00860 Permease family B856_11250 PF01741 Large-conductance mechanosensitive channel, MscL B856_11265 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain B856_11265 PF06827 Zinc finger found in FPG and IleRS B856_11265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain B856_11270 PF02245 Methylpurine-DNA glycosylase (MPG) B856_11275 PF00593 TonB dependent receptor B856_11275 PF07715 TonB-dependent Receptor Plug Domain B856_11280 PF14052 Capsule assembly protein Wzi B856_11285 PF00152 tRNA synthetases class II (D, K and N) B856_11285 PF01336 OB-fold nucleic acid binding domain B856_11300 PF00301 Rubredoxin B856_11305 PF18113 Rubredoxin binding C-terminal domain B856_11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_11310 PF00561 alpha/beta hydrolase fold B856_11315 PF03466 LysR substrate binding domain B856_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_11325 PF17941 Polyphosphate kinase C-terminal domain 1 B856_11325 PF02503 Polyphosphate kinase middle domain B856_11325 PF13090 Polyphosphate kinase C-terminal domain 2 B856_11325 PF13089 Polyphosphate kinase N-terminal domain B856_11330 PF00912 Transglycosylase B856_11335 PF01694 Rhomboid family B856_11345 PF00005 ABC transporter B856_11350 PF13472 GDSL-like Lipase/Acylhydrolase family B856_11355 PF00484 Carbonic anhydrase B856_11360 PF00561 alpha/beta hydrolase fold B856_11370 PF00593 TonB dependent receptor B856_11370 PF07715 TonB-dependent Receptor Plug Domain B856_11375 PF01521 Iron-sulphur cluster biosynthesis B856_11375 PF01106 NifU-like domain B856_11385 PF00884 Sulfatase B856_11390 PF03781 Sulfatase-modifying factor enzyme 1 B856_11405 PF00291 Pyridoxal-phosphate dependent enzyme B856_11410 PF01384 Phosphate transporter family B856_11415 PF02607 B12 binding domain B856_11415 PF00809 Pterin binding enzyme B856_11415 PF02310 B12 binding domain B856_11415 PF02574 Homocysteine S-methyltransferase B856_11415 PF02965 Vitamin B12 dependent methionine synthase, activation domain B856_11420 PF02780 Transketolase, C-terminal domain B856_11420 PF02779 Transketolase, pyrimidine binding domain B856_11425 PF00456 Transketolase, thiamine diphosphate binding domain B856_11430 PF07690 Major Facilitator Superfamily B856_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_11440 PF03466 LysR substrate binding domain B856_11450 PF01263 Aldose 1-epimerase B856_11455 PF07690 Major Facilitator Superfamily B856_11460 PF02311 AraC-like ligand binding domain B856_11460 PF12833 Helix-turn-helix domain B856_11465 PF04960 Glutaminase B856_11470 PF01327 Polypeptide deformylase B856_11480 PF07690 Major Facilitator Superfamily B856_11490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_11490 PF00205 Thiamine pyrophosphate enzyme, central domain B856_11490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_11495 PF00171 Aldehyde dehydrogenase family B856_11500 PF03447 Homoserine dehydrogenase, NAD binding domain B856_11500 PF01958 Domain of unknown function DUF108 B856_11510 PF12697 Alpha/beta hydrolase family B856_11520 PF07690 Major Facilitator Superfamily B856_11525 PF14759 Reductase C-terminal B856_11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_11530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_11540 PF00355 Rieske [2Fe-2S] domain B856_11550 PF00355 Rieske [2Fe-2S] domain B856_11555 PF01614 Bacterial transcriptional regulator B856_11555 PF09339 IclR helix-turn-helix domain B856_11570 PF00378 Enoyl-CoA hydratase/isomerase B856_11580 PF00535 Glycosyl transferase family 2 B856_11585 PF01522 Polysaccharide deacetylase B856_11585 PF14883 Hypothetical glycosyl hydrolase family 13 B856_11590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_11595 PF07152 YaeQ protein B856_11600 PF00375 Sodium:dicarboxylate symporter family B856_11605 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_11605 PF07683 Cobalamin synthesis protein cobW C-terminal domain B856_11615 PF03061 Thioesterase superfamily B856_11625 PF02028 BCCT, betaine/carnitine/choline family transporter B856_11630 PF02028 BCCT, betaine/carnitine/choline family transporter B856_11635 PF00440 Bacterial regulatory proteins, tetR family B856_11635 PF13977 BetI-type transcriptional repressor, C-terminal B856_11640 PF00171 Aldehyde dehydrogenase family B856_11645 PF00732 GMC oxidoreductase B856_11645 PF05199 GMC oxidoreductase B856_11650 PF06039 Malate:quinone oxidoreductase (Mqo) B856_11665 PF02574 Homocysteine S-methyltransferase B856_11670 PF13520 Amino acid permease B856_11695 PF01126 Heme oxygenase B856_11715 PF00593 TonB dependent receptor B856_11715 PF07715 TonB-dependent Receptor Plug Domain B856_11725 PF08281 Sigma-70, region 4 B856_11725 PF04542 Sigma-70 region 2 B856_11735 PF00701 Dihydrodipicolinate synthetase family B856_11740 PF00083 Sugar (and other) transporter B856_11760 PF01026 TatD related DNase B856_11775 PF07693 KAP family P-loop domain B856_11850 PF00589 Phage integrase family B856_11850 PF13356 Arm DNA-binding domain B856_11945 PF00712 DNA polymerase III beta subunit, N-terminal domain B856_11945 PF02767 DNA polymerase III beta subunit, central domain B856_11945 PF02768 DNA polymerase III beta subunit, C-terminal domain B856_11985 PF05016 ParE toxin of type II toxin-antitoxin system, parDE B856_12190 PF01695 IstB-like ATP binding protein B856_12200 PF00145 C-5 cytosine-specific DNA methylase B856_12285 PF00929 Exonuclease B856_12360 PF07690 Major Facilitator Superfamily B856_12365 PF13533 Biotin-lipoyl like B856_12370 PF03061 Thioesterase superfamily B856_12375 PF00490 Delta-aminolevulinic acid dehydratase B856_12380 PF01266 FAD dependent oxidoreductase B856_12385 PF08338 Domain of unknown function (DUF1731) B856_12385 PF01370 NAD dependent epimerase/dehydratase family B856_12405 PF12320 Type 5 capsule protein repressor C-terminal domain B856_12405 PF00149 Calcineurin-like phosphoesterase B856_12420 PF01168 Alanine racemase, N-terminal domain B856_12425 PF00437 Type II/IV secretion system protein B856_12430 PF00437 Type II/IV secretion system protein B856_12435 PF01475 Ferric uptake regulator family B856_12440 PF04355 SmpA / OmlA family B856_12445 PF03658 RnfH family Ubiquitin B856_12455 PF01814 Hemerythrin HHE cation binding domain B856_12460 PF13230 Glutamine amidotransferases class-II B856_12470 PF00696 Amino acid kinase family B856_12475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_12475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B856_12475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_12475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_12480 PF00692 dUTPase B856_12485 PF13361 UvrD-like helicase C-terminal domain B856_12485 PF00580 UvrD/REP helicase N-terminal domain B856_12490 PF00691 OmpA family B856_12490 PF13488 Glycine zipper B856_12495 PF01553 Acyltransferase B856_12505 PF03775 Septum formation inhibitor MinC, C-terminal domain B856_12510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B856_12515 PF03776 Septum formation topological specificity factor MinE B856_12525 PF00171 Aldehyde dehydrogenase family B856_12545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_12545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_12545 PF02770 Acyl-CoA dehydrogenase, middle domain B856_12555 PF00158 Sigma-54 interaction domain B856_12555 PF02954 Bacterial regulatory protein, Fis family B856_12555 PF06506 Propionate catabolism activator B856_12560 PF00501 AMP-binding enzyme B856_12560 PF13193 AMP-binding enzyme C-terminal domain B856_12565 PF04341 Protein of unknown function, DUF485 B856_12570 PF00474 Sodium:solute symporter family B856_12575 PF00107 Zinc-binding dehydrogenase B856_12575 PF08240 Alcohol dehydrogenase GroES-like domain B856_12580 PF00171 Aldehyde dehydrogenase family B856_12590 PF00561 alpha/beta hydrolase fold B856_12595 PF06628 Catalase-related immune-responsive B856_12595 PF00199 Catalase B856_12615 PF07859 alpha/beta hydrolase fold B856_12620 PF01047 MarR family B856_12625 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_12625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_12630 PF00106 short chain dehydrogenase B856_12635 PF01872 RibD C-terminal domain B856_12640 PF09278 MerR, DNA binding B856_12640 PF00376 MerR family regulatory protein B856_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_12660 PF12706 Beta-lactamase superfamily domain B856_12665 PF00440 Bacterial regulatory proteins, tetR family B856_12665 PF08359 YsiA-like protein, C-terminal region B856_12675 PF00857 Isochorismatase family B856_12680 PF03466 LysR substrate binding domain B856_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12685 PF07995 Glucose / Sorbosone dehydrogenase B856_12690 PF02254 TrkA-N domain B856_12690 PF00999 Sodium/hydrogen exchanger family B856_12700 PF07687 Peptidase dimerisation domain B856_12700 PF01546 Peptidase family M20/M25/M40 B856_12710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB B856_12710 PF17287 POTRA domain B856_12710 PF08479 POTRA domain, ShlB-type B856_12715 PF05860 haemagglutination activity domain B856_12715 PF04829 Pre-toxin domain with VENN motif B856_12715 PF13332 Hemagglutinin repeat B856_12715 PF13018 Extended Signal Peptide of Type V secretion system B856_12735 PF07690 Major Facilitator Superfamily B856_12740 PF04909 Amidohydrolase B856_12755 PF08450 SMP-30/Gluconolactonase/LRE-like region B856_12765 PF03466 LysR substrate binding domain B856_12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12785 PF07690 Major Facilitator Superfamily B856_12790 PF01842 ACT domain B856_12790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_12790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_12795 PF03737 Aldolase/RraA B856_12815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_12815 PF00529 HlyD membrane-fusion protein of T1SS B856_12830 PF00171 Aldehyde dehydrogenase family B856_12840 PF00288 GHMP kinases N terminal domain B856_12840 PF08544 GHMP kinases C terminal B856_12845 PF03550 Outer membrane lipoprotein LolB B856_12855 PF01488 Shikimate / quinate 5-dehydrogenase B856_12855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B856_12855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B856_12860 PF08275 DNA primase catalytic core, N-terminal domain B856_12860 PF08278 DNA primase DnaG DnaB-binding B856_12860 PF10410 DnaB-helicase binding domain of primase B856_12860 PF01807 CHC2 zinc finger B856_12865 PF13525 Outer membrane lipoprotein B856_12870 PF00849 RNA pseudouridylate synthase B856_12870 PF01479 S4 domain B856_12880 PF03358 NADPH-dependent FMN reductase B856_12885 PF01668 SmpB protein B856_12890 PF01467 Cytidylyltransferase-like B856_12895 PF00037 4Fe-4S binding domain B856_12910 PF03466 LysR substrate binding domain B856_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12915 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_12920 PF02028 BCCT, betaine/carnitine/choline family transporter B856_12925 PF07859 alpha/beta hydrolase fold B856_12930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_12930 PF00355 Rieske [2Fe-2S] domain B856_12935 PF00171 Aldehyde dehydrogenase family B856_12940 PF00175 Oxidoreductase NAD-binding domain B856_12940 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_12940 PF00970 Oxidoreductase FAD-binding domain B856_12955 PF00795 Carbon-nitrogen hydrolase B856_12955 PF02540 NAD synthase B856_12965 PF05726 Pirin C-terminal cupin domain B856_12965 PF02678 Pirin B856_12975 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_12975 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_12985 PF00164 Ribosomal protein S12/S23 B856_12990 PF00177 Ribosomal protein S7p/S5e B856_12995 PF00679 Elongation factor G C-terminus B856_12995 PF14492 Elongation Factor G, domain II B856_12995 PF03764 Elongation factor G, domain IV B856_12995 PF00009 Elongation factor Tu GTP binding domain B856_12995 PF03144 Elongation factor Tu domain 2 B856_13055 PF01645 Conserved region in glutamate synthase B856_13070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B856_13070 PF01565 FAD binding domain B856_13075 PF01451 Low molecular weight phosphotyrosine protein phosphatase B856_13085 PF00465 Iron-containing alcohol dehydrogenase B856_13090 PF03061 Thioesterase superfamily B856_13095 PF05506 Domain of unknown function (DUF756) B856_13095 PF04185 Phosphoesterase family B856_13105 PF12170 DNA polymerase III tau subunit V interacting with alpha B856_13105 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding B856_13105 PF12169 DNA polymerase III subunits gamma and tau domain III B856_13110 PF07690 Major Facilitator Superfamily B856_13135 PF00108 Thiolase, N-terminal domain B856_13135 PF02803 Thiolase, C-terminal domain B856_13145 PF03466 LysR substrate binding domain B856_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_13155 PF01810 LysE type translocator B856_13160 PF01037 Lrp/AsnC ligand binding domain B856_13165 PF03594 Benzoate membrane transport protein B856_13170 PF02308 MgtC family B856_13175 PF00689 Cation transporting ATPase, C-terminus B856_13175 PF00690 Cation transporter/ATPase, N-terminus B856_13195 PF00582 Universal stress protein family B856_13200 PF12848 ABC transporter B856_13200 PF00005 ABC transporter B856_13220 PF07715 TonB-dependent Receptor Plug Domain B856_13220 PF00593 TonB dependent receptor B856_13545 PF00999 Sodium/hydrogen exchanger family B856_13550 PF04228 Putative neutral zinc metallopeptidase B856_13555 PF05661 Protein of unknown function (DUF808) B856_13560 PF00579 tRNA synthetases class I (W and Y) B856_13565 PF00549 CoA-ligase B856_13565 PF02629 CoA binding domain B856_13570 PF00549 CoA-ligase B856_13570 PF08442 ATP-grasp domain B856_13575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_13575 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_13580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_13580 PF00364 Biotin-requiring enzyme B856_13580 PF02817 e3 binding domain B856_13585 PF00676 Dehydrogenase E1 component B856_13585 PF16078 2-oxoglutarate dehydrogenase N-terminus B856_13585 PF16870 2-oxoglutarate dehydrogenase C-terminal B856_13585 PF02779 Transketolase, pyrimidine binding domain B856_13590 PF13085 2Fe-2S iron-sulfur cluster binding domain B856_13595 PF00890 FAD binding domain B856_13595 PF02910 Fumarate reductase flavoprotein C-term B856_13600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B856_13605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B856_13610 PF00285 Citrate synthase, C-terminal domain B856_13640 PF04546 Sigma-70, non-essential region B856_13640 PF03979 Sigma-70 factor, region 1.1 B856_13640 PF00140 Sigma-70 factor, region 1.2 B856_13640 PF04545 Sigma-70, region 4 B856_13640 PF04539 Sigma-70 region 3 B856_13640 PF04542 Sigma-70 region 2 B856_13645 PF04359 Protein of unknown function (DUF493) B856_13650 PF03099 Biotin/lipoate A/B protein ligase family B856_13660 PF00465 Iron-containing alcohol dehydrogenase B856_13665 PF13520 Amino acid permease B856_13670 PF03358 NADPH-dependent FMN reductase B856_13675 PF01638 HxlR-like helix-turn-helix B856_13680 PF00588 SpoU rRNA Methylase family B856_13685 PF14824 Sirohaem biosynthesis protein central B856_13685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B856_13685 PF10414 Sirohaem synthase dimerisation region B856_13690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_13690 PF02403 Seryl-tRNA synthetase N-terminal domain B856_13700 PF03548 Outer membrane lipoprotein carrier protein LolA B856_13705 PF01016 Ribosomal L27 protein B856_13710 PF00829 Ribosomal prokaryotic L21 protein B856_13720 PF00348 Polyprenyl synthetase B856_13730 PF01569 PAP2 superfamily B856_13735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B856_13735 PF00529 HlyD membrane-fusion protein of T1SS B856_13740 PF00873 AcrB/AcrD/AcrF family B856_13745 PF02321 Outer membrane efflux protein B856_13750 PF01906 Putative heavy-metal-binding B856_13755 PF01906 Putative heavy-metal-binding B856_13775 PF08264 Anticodon-binding domain of tRNA B856_13775 PF00133 tRNA synthetases class I (I, L, M and V) B856_13775 PF10458 Valyl tRNA synthetase tRNA binding arm B856_13795 PF03466 LysR substrate binding domain B856_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_13800 PF00909 Ammonium Transporter Family B856_13810 PF00512 His Kinase A (phospho-acceptor) domain B856_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_13810 PF08521 Two-component sensor kinase N-terminal B856_13815 PF00072 Response regulator receiver domain B856_13815 PF00486 Transcriptional regulatory protein, C terminal B856_13820 PF00375 Sodium:dicarboxylate symporter family B856_13830 PF16123 Hydroxyacylglutathione hydrolase C-terminus B856_13830 PF00753 Metallo-beta-lactamase superfamily B856_13835 PF00528 Binding-protein-dependent transport system inner membrane component B856_13840 PF09383 NIL domain B856_13840 PF00005 ABC transporter B856_13845 PF03180 NLPA lipoprotein B856_13850 PF02843 Phosphoribosylglycinamide synthetase, C domain B856_13850 PF02844 Phosphoribosylglycinamide synthetase, N domain B856_13850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B856_13855 PF01808 AICARFT/IMPCHase bienzyme B856_13855 PF02142 MGS-like domain B856_13860 PF02954 Bacterial regulatory protein, Fis family B856_13880 PF01134 Glucose inhibited division protein A B856_13880 PF13932 GidA associated domain B856_13895 PF14403 Circularly permuted ATP-grasp type 2 B856_13905 PF01841 Transglutaminase-like superfamily B856_13905 PF08379 Bacterial transglutaminase-like N-terminal region B856_13915 PF01168 Alanine racemase, N-terminal domain B856_13915 PF00842 Alanine racemase, C-terminal domain B856_13920 PF00772 DnaB-like helicase N terminal domain B856_13920 PF03796 DnaB-like helicase C terminal domain B856_13925 PF03948 Ribosomal protein L9, C-terminal domain B856_13925 PF01281 Ribosomal protein L9, N-terminal domain B856_13930 PF01084 Ribosomal protein S18 B856_13935 PF01250 Ribosomal protein S6 B856_13940 PF01040 UbiA prenyltransferase family B856_13945 PF03626 Prokaryotic Cytochrome C oxidase subunit IV B856_13950 PF00510 Cytochrome c oxidase subunit III B856_13955 PF00115 Cytochrome C and Quinol oxidase polypeptide I B856_13960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain B856_13960 PF06481 COX Aromatic Rich Motif B856_13970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B856_13970 PF02896 PEP-utilising enzyme, TIM barrel domain B856_13970 PF00391 PEP-utilising enzyme, mobile domain B856_13975 PF03618 Kinase/pyrophosphorylase B856_13985 PF14883 Hypothetical glycosyl hydrolase family 13 B856_13985 PF01522 Polysaccharide deacetylase B856_13990 PF00535 Glycosyl transferase family 2 B856_13995 PF13994 PgaD-like protein B856_14005 PF00296 Luciferase-like monooxygenase B856_14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14020 PF03466 LysR substrate binding domain B856_14030 PF00472 RF-1 domain B856_14030 PF03462 PCRF domain B856_14035 PF13847 Methyltransferase domain B856_14035 PF17827 PrmC N-terminal domain B856_14040 PF00528 Binding-protein-dependent transport system inner membrane component B856_14045 PF09084 NMT1/THI5 like B856_14050 PF12833 Helix-turn-helix domain B856_14055 PF00106 short chain dehydrogenase B856_14060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_14060 PF02770 Acyl-CoA dehydrogenase, middle domain B856_14060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_14065 PF13193 AMP-binding enzyme C-terminal domain B856_14065 PF00501 AMP-binding enzyme B856_14070 PF01613 Flavin reductase like domain B856_14075 PF00899 ThiF family B856_14080 PF03109 ABC1 family B856_14095 PF03814 Potassium-transporting ATPase A subunit B856_14105 PF02669 K+-transporting ATPase, c chain B856_14110 PF02702 Osmosensitive K+ channel His kinase sensor domain B856_14110 PF00512 His Kinase A (phospho-acceptor) domain B856_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_14110 PF13493 Domain of unknown function (DUF4118) B856_14115 PF00486 Transcriptional regulatory protein, C terminal B856_14115 PF00072 Response regulator receiver domain B856_14120 PF00120 Glutamine synthetase, catalytic domain B856_14130 PF03232 Ubiquinone biosynthesis protein COQ7 B856_14135 PF07690 Major Facilitator Superfamily B856_14140 PF17243 POTRA domain TamA domain 1 B856_14140 PF01103 Surface antigen B856_14140 PF07244 Surface antigen variable number repeat B856_14155 PF11791 Aconitate B N-terminal domain B856_14155 PF00330 Aconitase family (aconitate hydratase) B856_14155 PF06434 Aconitate hydratase 2 N-terminus B856_14165 PF00027 Cyclic nucleotide-binding domain B856_14165 PF00520 Ion transport protein B856_14170 PF07690 Major Facilitator Superfamily B856_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14185 PF03466 LysR substrate binding domain B856_14190 PF04284 Protein of unknown function (DUF441) B856_14200 PF00849 RNA pseudouridylate synthase B856_14200 PF01479 S4 domain B856_14215 PF00849 RNA pseudouridylate synthase B856_14215 PF01479 S4 domain B856_14220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE B856_14225 PF01119 DNA mismatch repair protein, C-terminal domain B856_14225 PF08676 MutL C terminal dimerisation domain B856_14235 PF17209 Hfq protein B856_14245 PF00881 Nitroreductase family B856_14255 PF00149 Calcineurin-like phosphoesterase B856_14260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B856_14265 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B856_14265 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_14270 PF00958 GMP synthase C terminal domain B856_14270 PF00117 Glutamine amidotransferase class-I B856_14270 PF02540 NAD synthase B856_14275 PF05985 Ethanolamine ammonia-lyase light chain (EutC) B856_14280 PF06751 Ethanolamine ammonia lyase large subunit (EutB) B856_14285 PF13520 Amino acid permease B856_14290 PF00171 Aldehyde dehydrogenase family B856_14305 PF00465 Iron-containing alcohol dehydrogenase B856_14310 PF14493 Helix-turn-helix domain B856_14310 PF05970 PIF1-like helicase B856_14320 PF06445 GyrI-like small molecule binding domain B856_14325 PF02110 Hydroxyethylthiazole kinase family B856_14340 PF01433 Peptidase family M1 domain B856_14340 PF11940 Domain of unknown function (DUF3458) Ig-like fold B856_14340 PF17432 Domain of unknown function (DUF3458_C) ARM repeats B856_14350 PF00106 short chain dehydrogenase B856_14365 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_14365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_14370 PF00764 Arginosuccinate synthase B856_14375 PF00360 Phytochrome region B856_14375 PF00563 EAL domain B856_14375 PF01590 GAF domain B856_14375 PF00990 Diguanylate cyclase, GGDEF domain B856_14380 PF01979 Amidohydrolase family B856_14385 PF00929 Exonuclease B856_14395 PF00593 TonB dependent receptor B856_14395 PF07715 TonB-dependent Receptor Plug Domain B856_14400 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_14400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_14405 PF00005 ABC transporter B856_14405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B856_14410 PF00528 Binding-protein-dependent transport system inner membrane component B856_14410 PF12911 N-terminal TM domain of oligopeptide transport permease C B856_14415 PF00528 Binding-protein-dependent transport system inner membrane component B856_14420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B856_14425 PF01476 LysM domain B856_14425 PF01464 Transglycosylase SLT domain B856_14425 PF01476 LysM domain B856_14425 PF01464 Transglycosylase SLT domain B856_14430 PF00929 Exonuclease B856_14440 PF09297 NADH pyrophosphatase zinc ribbon domain B856_14440 PF00293 NUDIX domain B856_14450 PF04972 BON domain B856_14455 PF02021 Uncharacterised protein family UPF0102 B856_14460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B856_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14470 PF03466 LysR substrate binding domain B856_14475 PF01810 LysE type translocator B856_14485 PF13411 MerR HTH family regulatory protein B856_14495 PF01494 FAD binding domain B856_14500 PF01494 FAD binding domain B856_14505 PF05195 Aminopeptidase P, N-terminal domain B856_14505 PF00557 Metallopeptidase family M24 B856_14540 PF00144 Beta-lactamase B856_14555 PF05675 Protein of unknown function (DUF817) B856_14560 PF01208 Uroporphyrinogen decarboxylase (URO-D) B856_14570 PF00425 chorismate binding enzyme B856_14580 PF00975 Thioesterase domain B856_14585 PF00664 ABC transporter transmembrane region B856_14585 PF00005 ABC transporter B856_14590 PF00664 ABC transporter transmembrane region B856_14590 PF00005 ABC transporter B856_14600 PF00282 Pyridoxal-dependent decarboxylase conserved domain B856_14605 PF00857 Isochorismatase family B856_14605 PF00550 Phosphopantetheine attachment site B856_14610 PF13193 AMP-binding enzyme C-terminal domain B856_14610 PF00501 AMP-binding enzyme B856_14615 PF00668 Condensation domain B856_14615 PF00501 AMP-binding enzyme B856_14615 PF00550 Phosphopantetheine attachment site B856_14620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) B856_14625 PF00593 TonB dependent receptor B856_14625 PF07715 TonB-dependent Receptor Plug Domain B856_14630 PF01497 Periplasmic binding protein B856_14635 PF00005 ABC transporter B856_14640 PF01032 FecCD transport family B856_14645 PF01032 FecCD transport family B856_14650 PF00975 Thioesterase domain B856_14650 PF00501 AMP-binding enzyme B856_14650 PF00550 Phosphopantetheine attachment site B856_14650 PF13193 AMP-binding enzyme C-terminal domain B856_14650 PF00668 Condensation domain B856_14655 PF13193 AMP-binding enzyme C-terminal domain B856_14655 PF00550 Phosphopantetheine attachment site B856_14655 PF00501 AMP-binding enzyme B856_14655 PF00668 Condensation domain B856_14665 PF13309 HTH domain B856_14665 PF08348 YheO-like PAS domain B856_14675 PF17954 Quercetinase C-terminal cupin domain B856_14675 PF02678 Pirin B856_14700 PF00440 Bacterial regulatory proteins, tetR family B856_14705 PF08240 Alcohol dehydrogenase GroES-like domain B856_14705 PF14765 Polyketide synthase dehydratase B856_14705 PF00550 Phosphopantetheine attachment site B856_14705 PF08659 KR domain B856_14705 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_14705 PF08990 Erythronolide synthase docking B856_14705 PF09277 Erythronolide synthase, docking B856_14705 PF00698 Acyl transferase domain B856_14705 PF16197 Ketoacyl-synthetase C-terminal extension B856_14705 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_14710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B856_14710 PF13378 Enolase C-terminal domain-like B856_14715 PF00083 Sugar (and other) transporter B856_14720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system B856_14730 PF00892 EamA-like transporter family B856_14750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase B856_14750 PF01266 FAD dependent oxidoreductase B856_14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_14755 PF18113 Rubredoxin binding C-terminal domain B856_14765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_14765 PF00355 Rieske [2Fe-2S] domain B856_14770 PF02028 BCCT, betaine/carnitine/choline family transporter B856_14775 PF02028 BCCT, betaine/carnitine/choline family transporter B856_14780 PF03466 LysR substrate binding domain B856_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14785 PF00324 Amino acid permease B856_14790 PF00171 Aldehyde dehydrogenase family B856_14805 PF06018 CodY GAF-like domain B856_14805 PF17853 GGDEF-like domain B856_14805 PF13556 PucR C-terminal helix-turn-helix domain B856_14840 PF04328 Selenoprotein, putative B856_14845 PF13722 5TM C-terminal transporter carbon starvation CstA B856_14845 PF02554 Carbon starvation protein CstA B856_14850 PF01132 Elongation factor P (EF-P) OB domain B856_14850 PF08207 Elongation factor P (EF-P) KOW-like domain B856_14850 PF09285 Elongation factor P, C-terminal B856_14855 PF04055 Radical SAM superfamily B856_14870 PF01197 Ribosomal protein L31 B856_14875 PF13593 SBF-like CPA transporter family (DUF4137) B856_14880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_14885 PF07690 Major Facilitator Superfamily B856_14890 PF05362 Lon protease (S16) C-terminal proteolytic domain B856_14890 PF13654 AAA domain B856_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14895 PF03466 LysR substrate binding domain B856_14900 PF01551 Peptidase family M23 B856_14900 PF01476 LysM domain B856_14905 PF01975 Survival protein SurE B856_14920 PF07943 Penicillin-binding protein 5, C-terminal domain B856_14920 PF00768 D-alanyl-D-alanine carboxypeptidase B856_14925 PF00132 Bacterial transferase hexapeptide (six repeats) B856_14930 PF13344 Haloacid dehalogenase-like hydrolase B856_14930 PF00293 NUDIX domain B856_14940 PF04356 Protein of unknown function (DUF489) B856_14945 PF00206 Lyase B856_14945 PF08328 Adenylosuccinate lyase C-terminal B856_14955 PF07690 Major Facilitator Superfamily B856_14960 PF00440 Bacterial regulatory proteins, tetR family B856_14960 PF02909 Tetracyclin repressor-like, C-terminal domain B856_14985 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase B856_14990 PF01636 Phosphotransferase enzyme family B856_15000 PF01078 Magnesium chelatase, subunit ChlI B856_15000 PF13335 Magnesium chelatase, subunit ChlI C-terminal B856_15010 PF00543 Nitrogen regulatory protein P-II B856_15015 PF00909 Ammonium Transporter Family B856_15020 PF03477 ATP cone domain B856_15025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B856_15025 PF01872 RibD C-terminal domain B856_15035 PF00677 Lumazine binding domain B856_15055 PF02789 Cytosol aminopeptidase family, N-terminal domain B856_15055 PF00883 Cytosol aminopeptidase family, catalytic domain B856_15065 PF03739 Lipopolysaccharide export system permease LptF/LptG B856_15070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) B856_15070 PF01676 Metalloenzyme superfamily B856_15075 PF03572 Peptidase family S41 B856_15075 PF00595 PDZ domain B856_15080 PF00158 Sigma-54 interaction domain B856_15080 PF00072 Response regulator receiver domain B856_15080 PF02954 Bacterial regulatory protein, Fis family B856_15085 PF00512 His Kinase A (phospho-acceptor) domain B856_15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_15090 PF00072 Response regulator receiver domain B856_15090 PF00196 Bacterial regulatory proteins, luxR family B856_15095 PF00768 D-alanyl-D-alanine carboxypeptidase B856_15100 PF00291 Pyridoxal-phosphate dependent enzyme B856_15105 PF01842 ACT domain B856_15105 PF00742 Homoserine dehydrogenase B856_15105 PF03447 Homoserine dehydrogenase, NAD binding domain B856_15110 PF13098 Thioredoxin-like domain B856_15110 PF10411 Disulfide bond isomerase protein N-terminus B856_15115 PF02899 Phage integrase, N-terminal SAM-like domain B856_15115 PF00589 Phage integrase family B856_15125 PF07664 Ferrous iron transport protein B C terminus B856_15125 PF02421 Ferrous iron transport protein B B856_15125 PF07670 Nucleoside recognition B856_15135 PF08245 Mur ligase middle domain B856_15135 PF02875 Mur ligase family, glutamate ligase domain B856_15140 PF01098 Cell cycle protein B856_15145 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_15150 PF01258 Prokaryotic dksA/traR C4-type zinc finger B856_15155 PF00149 Calcineurin-like phosphoesterase B856_15160 PF00293 NUDIX domain B856_15165 PF13667 ThiC-associated domain B856_15165 PF01964 Radical SAM ThiC family B856_15180 PF00892 EamA-like transporter family B856_15185 PF02321 Outer membrane efflux protein B856_15190 PF01895 PhoU domain B856_15195 PF04362 Bacterial Fe(2+) trafficking B856_15200 PF00206 Lyase B856_15200 PF14698 Argininosuccinate lyase C-terminal B856_15205 PF07694 5TMR of 5TMR-LYT B856_15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_15205 PF06580 Histidine kinase B856_15210 PF00072 Response regulator receiver domain B856_15210 PF04397 LytTr DNA-binding domain B856_15215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B856_15215 PF03900 Porphobilinogen deaminase, C-terminal domain B856_15240 PF00816 H-NS histone family B856_15255 PF00263 Bacterial type II and III secretion system protein B856_15255 PF03958 Bacterial type II/III secretion system short domain B856_15260 PF12401 Protein of unknown function (DUF2662) B856_15260 PF00498 FHA domain B856_15265 PF13419 Haloacid dehalogenase-like hydrolase B856_15270 PF04715 Anthranilate synthase component I, N terminal region B856_15270 PF00425 chorismate binding enzyme B856_15300 PF00474 Sodium:solute symporter family B856_15305 PF01037 Lrp/AsnC ligand binding domain B856_15310 PF01619 Proline dehydrogenase B856_15310 PF00171 Aldehyde dehydrogenase family B856_15310 PF14850 DNA-binding domain of Proline dehydrogenase B856_15310 PF18327 Proline utilization A proline dehydrogenase N-terminal domain B856_15315 PF04229 GrpB protein B856_15320 PF05958 tRNA (Uracil-5-)-methyltransferase B856_15330 PF09992 Phosphodiester glycosidase B856_15340 PF04264 YceI-like domain B856_15350 PF02779 Transketolase, pyrimidine binding domain B856_15350 PF00456 Transketolase, thiamine diphosphate binding domain B856_15350 PF02780 Transketolase, C-terminal domain B856_15355 PF02773 S-adenosylmethionine synthetase, C-terminal domain B856_15355 PF02772 S-adenosylmethionine synthetase, central domain B856_15355 PF00438 S-adenosylmethionine synthetase, N-terminal domain B856_15375 PF00905 Penicillin binding protein transpeptidase domain B856_15390 PF02075 Crossover junction endodeoxyribonuclease RuvC B856_15395 PF01256 Carbohydrate kinase B856_15395 PF03853 YjeF-related protein N-terminus B856_15400 PF08331 Domain of unknown function (DUF1730) B856_15405 PF06968 Biotin and Thiamin Synthesis associated domain B856_15405 PF04055 Radical SAM superfamily B856_15420 PF16970 Type-1 fimbrial protein, A B856_15425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain B856_15425 PF02753 Pili assembly chaperone PapD, C-terminal domain B856_15430 PF00577 Outer membrane usher protein B856_15430 PF13954 PapC N-terminal domain B856_15430 PF13953 PapC C-terminal domain B856_15450 PF00892 EamA-like transporter family B856_15460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_15470 PF03466 LysR substrate binding domain B856_15495 PF00440 Bacterial regulatory proteins, tetR family B856_15505 PF01709 Transcriptional regulator B856_15510 PF01037 Lrp/AsnC ligand binding domain B856_15520 PF00005 ABC transporter B856_15525 PF00528 Binding-protein-dependent transport system inner membrane component B856_15530 PF00528 Binding-protein-dependent transport system inner membrane component B856_15545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_15545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_15555 PF00296 Luciferase-like monooxygenase B856_15560 PF03180 NLPA lipoprotein B856_15565 PF03180 NLPA lipoprotein B856_15570 PF09383 NIL domain B856_15570 PF00005 ABC transporter B856_15575 PF00528 Binding-protein-dependent transport system inner membrane component B856_15580 PF06071 Protein of unknown function (DUF933) B856_15580 PF01926 50S ribosome-binding GTPase B856_15605 PF03591 AzlC protein B856_15610 PF05437 Branched-chain amino acid transport protein (AzlD) B856_15620 PF02222 ATP-grasp domain B856_15625 PF08335 GlnD PII-uridylyltransferase B856_15625 PF01966 HD domain B856_15625 PF01909 Nucleotidyltransferase domain B856_15630 PF00155 Aminotransferase class I and II B856_15640 PF12833 Helix-turn-helix domain B856_15640 PF12852 Cupin B856_15645 PF00255 Glutathione peroxidase B856_15650 PF01641 SelR domain B856_15655 PF00155 Aminotransferase class I and II B856_15660 PF00375 Sodium:dicarboxylate symporter family B856_15665 PF00710 Asparaginase, N-terminal B856_15665 PF17763 Glutaminase/Asparaginase C-terminal domain B856_15670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B856_15670 PF01336 OB-fold nucleic acid binding domain B856_15670 PF02811 PHP domain B856_15670 PF07733 Bacterial DNA polymerase III alpha NTPase domain B856_15670 PF14579 Helix-hairpin-helix motif B856_15675 PF00588 SpoU rRNA Methylase family B856_15680 PF00132 Bacterial transferase hexapeptide (six repeats) B856_15695 PF13192 Thioredoxin domain B856_15695 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_15705 PF01066 CDP-alcohol phosphatidyltransferase B856_15710 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ B856_15730 PF00056 lactate/malate dehydrogenase, NAD binding domain B856_15730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B856_15740 PF01551 Peptidase family M23 B856_15740 PF10145 Phage-related minor tail protein B856_15740 PF01464 Transglycosylase SLT domain B856_15745 PF00919 Uncharacterized protein family UPF0004 B856_15745 PF01938 TRAM domain B856_15745 PF04055 Radical SAM superfamily B856_15750 PF02562 PhoH-like protein B856_15755 PF02130 Uncharacterized protein family UPF0054 B856_15780 PF03358 NADPH-dependent FMN reductase B856_15785 PF03631 Virulence factor BrkB B856_15790 PF00892 EamA-like transporter family B856_15795 PF12833 Helix-turn-helix domain B856_15800 PF01557 Fumarylacetoacetate (FAA) hydrolase family B856_15875 PF01734 Patatin-like phospholipase B856_15885 PF01145 SPFH domain / Band 7 family B856_15890 PF04237 YjbR B856_15895 PF00348 Polyprenyl synthetase B856_15900 PF04303 PrpF protein B856_15905 PF00324 Amino acid permease B856_15915 PF01965 DJ-1/PfpI family B856_15920 PF09277 Erythronolide synthase, docking B856_15920 PF08240 Alcohol dehydrogenase GroES-like domain B856_15920 PF00698 Acyl transferase domain B856_15920 PF16197 Ketoacyl-synthetase C-terminal extension B856_15920 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_15920 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_15920 PF08659 KR domain B856_15920 PF00550 Phosphopantetheine attachment site B856_15920 PF14765 Polyketide synthase dehydratase B856_15920 PF08990 Erythronolide synthase docking B856_15925 PF06719 AraC-type transcriptional regulator N-terminus B856_15925 PF12833 Helix-turn-helix domain B856_15930 PF02673 Bacitracin resistance protein BacA B856_15955 PF02525 Flavodoxin-like fold B856_15970 PF01507 Phosphoadenosine phosphosulfate reductase family B856_15975 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain B856_15975 PF06974 Protein of unknown function (DUF1298) B856_15985 PF10150 Ribonuclease E/G family B856_15985 PF00575 S1 RNA binding domain B856_15990 PF02545 Maf-like protein B856_15995 PF04093 rod shape-determining protein MreD B856_16000 PF04085 rod shape-determining protein MreC B856_16010 PF02686 Glu-tRNAGln amidotransferase C subunit B856_16015 PF01425 Amidase B856_16020 PF02934 GatB/GatE catalytic domain B856_16020 PF02637 GatB domain B856_16035 PF00665 Integrase core domain B856_16055 PF03466 LysR substrate binding domain B856_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16060 PF01758 Sodium Bile acid symporter family B856_16065 PF01022 Bacterial regulatory protein, arsR family B856_16070 PF03960 ArsC family B856_16080 PF13382 Adenine deaminase C-terminal domain B856_16080 PF01979 Amidohydrolase family B856_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16090 PF03466 LysR substrate binding domain B856_16100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_16105 PF01177 Asp/Glu/Hydantoin racemase B856_16110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family B856_16115 PF00528 Binding-protein-dependent transport system inner membrane component B856_16120 PF00005 ABC transporter B856_16125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B856_16135 PF00083 Sugar (and other) transporter B856_16140 PF00296 Luciferase-like monooxygenase B856_16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_16145 PF02770 Acyl-CoA dehydrogenase, middle domain B856_16145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_16155 PF01654 Cytochrome bd terminal oxidase subunit I B856_16160 PF02322 Cytochrome bd terminal oxidase subunit II B856_16170 PF00155 Aminotransferase class I and II B856_16170 PF00392 Bacterial regulatory proteins, gntR family B856_16175 PF03466 LysR substrate binding domain B856_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16190 PF00698 Acyl transferase domain B856_16195 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG B856_16205 PF01039 Carboxyl transferase domain B856_16210 PF06857 Malonate decarboxylase delta subunit (MdcD) B856_16215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase B856_16220 PF16957 Malonate decarboxylase, alpha subunit, transporter B856_16230 PF07690 Major Facilitator Superfamily B856_16245 PF00155 Aminotransferase class I and II B856_16245 PF00392 Bacterial regulatory proteins, gntR family B856_16250 PF04172 LrgB-like family B856_16255 PF03788 LrgA family B856_16260 PF03466 LysR substrate binding domain B856_16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16265 PF14834 Glutathione S-transferase, C-terminal domain B856_16265 PF02798 Glutathione S-transferase, N-terminal domain B856_16270 PF02798 Glutathione S-transferase, N-terminal domain B856_16275 PF03466 LysR substrate binding domain B856_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16290 PF00581 Rhodanese-like domain B856_16295 PF00132 Bacterial transferase hexapeptide (six repeats) B856_16305 PF00266 Aminotransferase class-V B856_16310 PF01810 LysE type translocator B856_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16315 PF03466 LysR substrate binding domain B856_16320 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_16325 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_16330 PF00005 ABC transporter B856_16335 PF00528 Binding-protein-dependent transport system inner membrane component B856_16340 PF00528 Binding-protein-dependent transport system inner membrane component B856_16350 PF00072 Response regulator receiver domain B856_16355 PF00512 His Kinase A (phospho-acceptor) domain B856_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_16355 PF09308 LuxQ, periplasmic B856_16355 PF00072 Response regulator receiver domain B856_16365 PF13404 AsnC-type helix-turn-helix domain B856_16365 PF01037 Lrp/AsnC ligand binding domain B856_16375 PF00717 Peptidase S24-like B856_16395 PF00175 Oxidoreductase NAD-binding domain B856_16395 PF00258 Flavodoxin B856_16395 PF00667 FAD binding domain B856_16405 PF12805 FUSC-like inner membrane protein yccS B856_16410 PF07690 Major Facilitator Superfamily B856_16415 PF00881 Nitroreductase family B856_16430 PF01235 Sodium:alanine symporter family B856_16435 PF01734 Patatin-like phospholipase B856_16440 PF00291 Pyridoxal-phosphate dependent enzyme B856_16440 PF13291 ACT domain B856_16445 PF05992 SbmA/BacA-like family B856_16480 PF00990 Diguanylate cyclase, GGDEF domain B856_16480 PF17152 Periplasmic sensor domain B856_16485 PF01389 OmpA-like transmembrane domain B856_16485 PF00691 OmpA family B856_16490 PF00149 Calcineurin-like phosphoesterase B856_16490 PF10518 TAT (twin-arginine translocation) pathway signal sequence B856_16495 PF13091 PLD-like domain B856_16505 PF16360 GTP-binding GTPase Middle Region B856_16505 PF01926 50S ribosome-binding GTPase B856_16505 PF13167 GTP-binding GTPase N-terminal B856_16525 PF00149 Calcineurin-like phosphoesterase B856_16530 PF00398 Ribosomal RNA adenine dimethylase B856_16535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA B856_16540 PF00572 Ribosomal protein L13 B856_16545 PF00380 Ribosomal protein S9/S16 B856_16550 PF13417 Glutathione S-transferase, N-terminal domain B856_16550 PF00043 Glutathione S-transferase, C-terminal domain B856_16555 PF04386 Stringent starvation protein B B856_16565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_16565 PF00364 Biotin-requiring enzyme B856_16565 PF00289 Biotin carboxylase, N-terminal domain B856_16565 PF02785 Biotin carboxylase C-terminal domain B856_16575 PF02770 Acyl-CoA dehydrogenase, middle domain B856_16575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_16575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_16580 PF01039 Carboxyl transferase domain B856_16595 PF17932 Tetracyclin repressor-like, C-terminal domain B856_16595 PF00440 Bacterial regulatory proteins, tetR family B856_16600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_16600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_16600 PF02770 Acyl-CoA dehydrogenase, middle domain B856_16620 PF00291 Pyridoxal-phosphate dependent enzyme B856_16630 PF03358 NADPH-dependent FMN reductase B856_16650 PF08497 Radical SAM N-terminal B856_16650 PF11842 Domain of unknown function (DUF3362) B856_16650 PF04055 Radical SAM superfamily B856_16665 PF11798 IMS family HHH motif B856_16665 PF11799 impB/mucB/samB family C-terminal domain B856_16665 PF00817 impB/mucB/samB family B856_16675 PF07690 Major Facilitator Superfamily B856_16680 PF03641 Possible lysine decarboxylase B856_16685 PF03741 Integral membrane protein TerC family B856_16685 PF03471 Transporter associated domain B856_16690 PF02810 SEC-C motif B856_16695 PF03458 UPF0126 domain B856_16700 PF07690 Major Facilitator Superfamily B856_16705 PF00521 DNA gyrase/topoisomerase IV, subunit A B856_16705 PF03989 DNA gyrase C-terminal domain, beta-propeller B856_16710 PF13193 AMP-binding enzyme C-terminal domain B856_16710 PF00501 AMP-binding enzyme B856_16725 PF00719 Inorganic pyrophosphatase B856_16730 PF03573 outer membrane porin, OprD family B856_16745 PF00701 Dihydrodipicolinate synthetase family B856_16780 PF00293 NUDIX domain B856_16785 PF00132 Bacterial transferase hexapeptide (six repeats) B856_16790 PF00814 Glycoprotease family B856_16795 PF04445 Putative SAM-dependent methyltransferase B856_16805 PF00756 Putative esterase B856_16815 PF00834 Ribulose-phosphate 3 epimerase family B856_16830 PF07731 Multicopper oxidase B856_16830 PF00394 Multicopper oxidase B856_16830 PF07732 Multicopper oxidase B856_16835 PF05275 Copper resistance protein B precursor (CopB) B856_16845 PF00893 Small Multidrug Resistance protein B856_16850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B856_16850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_16855 PF01960 ArgJ family B856_16860 PF02445 Quinolinate synthetase A protein B856_16905 PF00884 Sulfatase B856_16905 PF08019 Phosphoethanolamine transferase EptA/EptB B856_16915 PF02753 Pili assembly chaperone PapD, C-terminal domain B856_16915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain B856_16920 PF00577 Outer membrane usher protein B856_16920 PF13954 PapC N-terminal domain B856_16920 PF13953 PapC C-terminal domain B856_16925 PF00419 Fimbrial protein B856_16935 PF08240 Alcohol dehydrogenase GroES-like domain B856_16935 PF00107 Zinc-binding dehydrogenase B856_16945 PF00199 Catalase B856_16965 PF13091 PLD-like domain B856_16985 PF01244 Membrane dipeptidase (Peptidase family M19) B856_16990 PF04055 Radical SAM superfamily B856_16990 PF13186 Iron-sulfur cluster-binding domain B856_16995 PF05402 Coenzyme PQQ synthesis protein D (PqqD) B856_17000 PF03070 TENA/THI-4/PQQC family B856_17005 PF12706 Beta-lactamase superfamily domain B856_17010 PF13089 Polyphosphate kinase N-terminal domain B856_17010 PF13090 Polyphosphate kinase C-terminal domain 2 B856_17010 PF02503 Polyphosphate kinase middle domain B856_17010 PF17941 Polyphosphate kinase C-terminal domain 1 B856_17025 PF00857 Isochorismatase family B856_17025 PF00550 Phosphopantetheine attachment site B856_17030 PF00106 short chain dehydrogenase B856_17035 PF03459 TOBE domain B856_17035 PF00005 ABC transporter B856_17040 PF00528 Binding-protein-dependent transport system inner membrane component B856_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17050 PF03459 TOBE domain B856_17055 PF00355 Rieske [2Fe-2S] domain B856_17055 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_17060 PF00866 Ring hydroxylating beta subunit B856_17065 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_17065 PF00970 Oxidoreductase FAD-binding domain B856_17065 PF00175 Oxidoreductase NAD-binding domain B856_17070 PF14525 AraC-binding-like domain B856_17070 PF12833 Helix-turn-helix domain B856_17080 PF01613 Flavin reductase like domain B856_17095 PF01738 Dienelactone hydrolase family B856_17105 PF12833 Helix-turn-helix domain B856_17105 PF06719 AraC-type transcriptional regulator N-terminus B856_17110 PF00027 Cyclic nucleotide-binding domain B856_17110 PF13545 Crp-like helix-turn-helix domain B856_17115 PF02566 OsmC-like protein B856_17130 PF17871 AAA lid domain B856_17130 PF10431 C-terminal, D2-small domain, of ClpB protein B856_17130 PF07724 AAA domain (Cdc48 subfamily) B856_17130 PF02861 Clp amino terminal domain, pathogenicity island component B856_17130 PF00004 ATPase family associated with various cellular activities (AAA) B856_17145 PF02926 THUMP domain B856_17145 PF01170 Putative RNA methylase family UPF0020 B856_17145 PF10672 S-adenosylmethionine-dependent methyltransferase B856_17155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B856_17155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B856_17160 PF01979 Amidohydrolase family B856_17165 PF00691 OmpA family B856_17165 PF13488 Glycine zipper B856_17175 PF13417 Glutathione S-transferase, N-terminal domain B856_17175 PF00043 Glutathione S-transferase, C-terminal domain B856_17180 PF02390 Putative methyltransferase B856_17190 PF02798 Glutathione S-transferase, N-terminal domain B856_17190 PF00043 Glutathione S-transferase, C-terminal domain B856_17200 PF13192 Thioredoxin domain B856_17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_17205 PF13192 Thioredoxin domain B856_17210 PF00149 Calcineurin-like phosphoesterase B856_17215 PF00781 Diacylglycerol kinase catalytic domain B856_17220 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain B856_17220 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain B856_17225 PF01266 FAD dependent oxidoreductase B856_17225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase B856_17230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B856_17230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B856_17235 PF00083 Sugar (and other) transporter B856_17250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B856_17250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B856_17265 PF16655 PhoD-like phosphatase, N-terminal domain B856_17265 PF09423 PhoD-like phosphatase B856_17285 PF00809 Pterin binding enzyme B856_17290 PF00004 ATPase family associated with various cellular activities (AAA) B856_17290 PF17862 AAA+ lid domain B856_17290 PF06480 FtsH Extracellular B856_17290 PF01434 Peptidase family M41 B856_17295 PF01728 FtsJ-like methyltransferase B856_17300 PF01985 CRS1 / YhbY (CRM) domain B856_17315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B856_17315 PF00117 Glutamine amidotransferase class-I B856_17320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B856_17320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_17320 PF02142 MGS-like domain B856_17325 PF01272 Transcription elongation factor, GreA/GreB, C-term B856_17325 PF03449 Transcription elongation factor, N-terminal B856_17330 PF00132 Bacterial transferase hexapeptide (six repeats) B856_17335 PF00582 Universal stress protein family B856_17340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_17350 PF09587 Bacterial capsule synthesis protein PGA_cap B856_17385 PF01555 DNA methylase B856_17445 PF00962 Adenosine/AMP deaminase B856_17450 PF08240 Alcohol dehydrogenase GroES-like domain B856_17450 PF00107 Zinc-binding dehydrogenase B856_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17455 PF03466 LysR substrate binding domain B856_17460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_17460 PF02770 Acyl-CoA dehydrogenase, middle domain B856_17460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_17465 PF07690 Major Facilitator Superfamily B856_17470 PF02515 CoA-transferase family III B856_17480 PF00890 FAD binding domain B856_17480 PF14537 Cytochrome c3 B856_17485 PF03466 LysR substrate binding domain B856_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17495 PF07690 Major Facilitator Superfamily B856_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17500 PF03466 LysR substrate binding domain B856_17510 PF07687 Peptidase dimerisation domain B856_17510 PF01546 Peptidase family M20/M25/M40 B856_17515 PF12833 Helix-turn-helix domain B856_17515 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term B856_17525 PF01810 LysE type translocator B856_17530 PF03466 LysR substrate binding domain B856_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17540 PF08267 Cobalamin-independent synthase, N-terminal domain B856_17540 PF01717 Cobalamin-independent synthase, Catalytic domain B856_17545 PF01613 Flavin reductase like domain B856_17575 PF02567 Phenazine biosynthesis-like protein B856_17590 PF00905 Penicillin binding protein transpeptidase domain B856_17610 PF01507 Phosphoadenosine phosphosulfate reductase family B856_17615 PF00009 Elongation factor Tu GTP binding domain B856_17630 PF03600 Citrate transporter B856_17640 PF01595 Cyclin M transmembrane N-terminal domain B856_17640 PF03471 Transporter associated domain B856_17640 PF00571 CBS domain B856_17645 PF03466 LysR substrate binding domain B856_17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17650 PF00463 Isocitrate lyase family B856_17670 PF01774 UreD urease accessory protein B856_17675 PF00547 Urease, gamma subunit B856_17680 PF00699 Urease beta subunit B856_17685 PF01979 Amidohydrolase family B856_17685 PF00449 Urease alpha-subunit, N-terminal domain B856_17690 PF02814 UreE urease accessory protein, N-terminal domain B856_17690 PF05194 UreE urease accessory protein, C-terminal domain B856_17695 PF01730 UreF B856_17700 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_17715 PF03717 Penicillin-binding Protein dimerisation domain B856_17715 PF00905 Penicillin binding protein transpeptidase domain B856_17730 PF05191 Adenylate kinase, active site lid B856_17740 PF10576 Iron-sulfur binding domain of endonuclease III B856_17740 PF00633 Helix-hairpin-helix motif B856_17740 PF00730 HhH-GPD superfamily base excision DNA repair protein B856_17745 PF04060 Putative Fe-S cluster B856_17750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B856_17750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_17760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase B856_17765 PF02590 Predicted SPOUT methyltransferase B856_17770 PF02190 ATP-dependent protease La (LON) substrate-binding domain B856_17770 PF00004 ATPase family associated with various cellular activities (AAA) B856_17770 PF05362 Lon protease (S16) C-terminal proteolytic domain B856_17775 PF03895 YadA-like membrane anchor domain B856_17775 PF13018 Extended Signal Peptide of Type V secretion system B856_17775 PF05658 Head domain of trimeric autotransporter adhesin B856_17775 PF05662 Coiled stalk of trimeric autotransporter adhesin B856_17795 PF00795 Carbon-nitrogen hydrolase B856_17805 PF01047 MarR family B856_17810 PF02566 OsmC-like protein B856_17815 PF00437 Type II/IV secretion system protein B856_17915 PF01812 5-formyltetrahydrofolate cyclo-ligase family B856_17925 PF13018 Extended Signal Peptide of Type V secretion system B856_17925 PF03895 YadA-like membrane anchor domain B856_17925 PF05662 Coiled stalk of trimeric autotransporter adhesin B856_17925 PF05658 Head domain of trimeric autotransporter adhesin B856_17930 PF17932 Tetracyclin repressor-like, C-terminal domain B856_17930 PF00440 Bacterial regulatory proteins, tetR family B856_17935 PF02678 Pirin B856_17935 PF17954 Quercetinase C-terminal cupin domain B856_17945 PF00106 short chain dehydrogenase B856_17950 PF00743 Flavin-binding monooxygenase-like B856_17960 PF00860 Permease family B856_17965 PF00962 Adenosine/AMP deaminase B856_17970 PF01292 Prokaryotic cytochrome b561 B856_17980 PF01351 Ribonuclease HII B856_17985 PF02599 Global regulator protein family B856_17990 PF00696 Amino acid kinase family B856_17990 PF01842 ACT domain B856_17990 PF13840 ACT domain B856_17995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B856_17995 PF02272 DHHA1 domain B856_17995 PF01411 tRNA synthetases class II (A) B856_18000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B856_18000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_18005 PF13393 Histidyl-tRNA synthetase B856_18010 PF00709 Adenylosuccinate synthetase B856_18025 PF00248 Aldo/keto reductase family B856_18035 PF00309 Sigma-54 factor, Activator interacting domain (AID) B856_18035 PF04963 Sigma-54 factor, core binding domain B856_18035 PF04552 Sigma-54, DNA binding domain B856_18040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B856_18045 PF01722 BolA-like protein B856_18050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B856_18055 PF01634 ATP phosphoribosyltransferase B856_18060 PF00815 Histidinol dehydrogenase B856_18065 PF00155 Aminotransferase class I and II B856_18070 PF04715 Anthranilate synthase component I, N terminal region B856_18070 PF00425 chorismate binding enzyme B856_18090 PF03143 Elongation factor Tu C-terminal domain B856_18090 PF03144 Elongation factor Tu domain 2 B856_18090 PF00009 Elongation factor Tu GTP binding domain B856_18105 PF00583 Acetyltransferase (GNAT) family B856_18110 PF04377 Arginine-tRNA-protein transferase, C terminus B856_18110 PF04376 Arginine-tRNA-protein transferase, N terminus B856_18115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase B856_18120 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_18125 PF17854 FtsK alpha domain B856_18125 PF09397 Ftsk gamma domain B856_18125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE B856_18125 PF01580 FtsK/SpoIIIE family B856_18130 PF01810 LysE type translocator B856_18165 PF00582 Universal stress protein family B856_18170 PF01740 STAS domain B856_18170 PF00916 Sulfate permease family B856_18260 PF02384 N-6 DNA Methylase B856_18260 PF12161 HsdM N-terminal domain B856_18310 PF00872 Transposase, Mutator family B856_18325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase B856_18325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B856_18330 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_18330 PF01799 [2Fe-2S] binding domain B856_18350 PF01817 Chorismate mutase type II B856_18355 PF01037 Lrp/AsnC ligand binding domain B856_18365 PF00440 Bacterial regulatory proteins, tetR family B856_18370 PF00593 TonB dependent receptor B856_18370 PF07715 TonB-dependent Receptor Plug Domain B856_18375 PF00924 Mechanosensitive ion channel B856_18405 PF00375 Sodium:dicarboxylate symporter family B856_18420 PF00375 Sodium:dicarboxylate symporter family B856_18425 PF06912 Protein of unknown function (DUF1275) B856_18430 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) B856_18435 PF00664 ABC transporter transmembrane region B856_18435 PF00005 ABC transporter B856_18445 PF12833 Helix-turn-helix domain B856_18445 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term B856_18450 PF01597 Glycine cleavage H-protein B856_18455 PF02146 Sir2 family B856_18480 PF02796 Helix-turn-helix domain of resolvase B856_18480 PF00239 Resolvase, N terminal domain B856_18485 PF00171 Aldehyde dehydrogenase family B856_18505 PF00226 DnaJ domain B856_18505 PF00684 DnaJ central domain B856_18505 PF01556 DnaJ C terminal domain B856_18540 PF08751 TrwC relaxase B856_18540 PF18340 DNA relaxase TraI 2B/2B-like domain B856_18540 PF18272 single-stranded DNA binding TraI N-terminal subdomain B856_18540 PF07057 DNA helicase TraI B856_18630 PF00239 Resolvase, N terminal domain B856_18630 PF02796 Helix-turn-helix domain of resolvase B856_18645 PF01464 Transglycosylase SLT domain B856_18680 PF10411 Disulfide bond isomerase protein N-terminus B856_18680 PF13098 Thioredoxin-like domain B856_18715 PF06834 TraU protein B856_18725 PF06986 Type-1V conjugative transfer system mating pair stabilisation B856_18740 PF06122 Conjugative relaxosome accessory transposon protein B856_18760 PF11799 impB/mucB/samB family C-terminal domain B856_18760 PF13438 Domain of unknown function (DUF4113) B856_18760 PF00817 impB/mucB/samB family B856_18835 PF00565 Staphylococcal nuclease homologue B856_18845 PF00816 H-NS histone family B856_18900 PF13614 AAA domain B856_18905 PF17762 HTH domain found in ParB protein B856_18905 PF02195 ParB-like nuclease domain B856_18925 PF05816 Toxic anion resistance protein (TelA) B856_18935 PF13005 zinc-finger binding domain of transposase IS66 B856_18935 PF13007 Transposase C of IS166 homeodomain B856_18935 PF03050 Transposase IS66 family B856_18935 PF13817 IS66 C-terminal element B856_19025 PF00593 TonB dependent receptor B856_19025 PF07715 TonB-dependent Receptor Plug Domain B856_19060 PF13737 Transposase DDE domain B856_19065 PF07091 Ribosomal RNA methyltransferase (FmrO) B856_19085 PF01636 Phosphotransferase enzyme family B856_19095 PF13007 Transposase C of IS166 homeodomain B856_19095 PF13817 IS66 C-terminal element B856_19095 PF03050 Transposase IS66 family B856_19095 PF13005 zinc-finger binding domain of transposase IS66 B856_19125 PF01526 Tn3 transposase DDE domain B856_19125 PF13700 Domain of unknown function (DUF4158) B856_19130 PF13610 DDE domain B856_19135 PF01636 Phosphotransferase enzyme family