B856_00010 PF00043 Glutathione S-transferase, C-terminal domain B856_00010 PF13417 Glutathione S-transferase, N-terminal domain B856_00025 PF00209 Sodium:neurotransmitter symporter family B856_00035 PF01029 NusB family B856_00035 PF01189 NOL1/NOP2/sun family B856_00035 PF17125 B856_00035 B856_00040 PF00551 Formyl transferase B856_00040 PF02911 Formyl transferase, C-terminal domain B856_00045 PF00920 Dehydratase family B856_00055 PF01925 B856_00055 B856_00060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00060 PF03466 LysR substrate binding domain B856_00065 PF00860 Permease family B856_00070 PF00311 Phosphoenolpyruvate carboxylase B856_00075 PF00440 Bacterial regulatory proteins, tetR family B856_00075 PF14246 AefR-like transcriptional repressor, C-terminal region B856_00080 PF16576 B856_00080 B856_00085 PF00873 AcrB/AcrD/AcrF family B856_00095 PF00226 DnaJ domain B856_00095 PF00684 DnaJ central domain B856_00095 PF01556 DnaJ C terminal domain B856_00105 PF01113 Dihydrodipicolinate reductase, N-terminus B856_00105 PF05173 Dihydrodipicolinate reductase, C-terminus B856_00110 PF01852 START domain B856_00115 PF07690 Major Facilitator Superfamily B856_00120 PF00248 Aldo/keto reductase family B856_00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00125 PF03466 LysR substrate binding domain B856_00135 PF00155 Aminotransferase class I and II B856_00135 PF00392 Bacterial regulatory proteins, gntR family B856_00140 PF00107 Zinc-binding dehydrogenase B856_00140 PF08240 Alcohol dehydrogenase GroES-like domain B856_00145 PF03352 Methyladenine glycosylase B856_00155 PF01551 Peptidase family M23 B856_00160 PF00633 Helix-hairpin-helix motif B856_00160 PF00730 HhH-GPD superfamily base excision DNA repair protein B856_00160 PF14815 NUDIX domain B856_00165 PF01230 HIT domain B856_00170 PF01738 Dienelactone hydrolase family B856_00175 PF07043 B856_00175 B856_00180 PF03692 B856_00180 B856_00185 PF07995 Glucose / Sorbosone dehydrogenase B856_00190 PF00004 ATPase family associated with various cellular activities (AAA) B856_00190 PF12002 MgsA AAA+ ATPase C terminal B856_00190 PF16193 B856_00190 B856_00195 PF01226 Formate/nitrite transporter B856_00210 PF01259 SAICAR synthetase B856_00220 PF00701 Dihydrodipicolinate synthetase family B856_00225 PF00857 Isochorismatase family B856_00230 PF01758 Sodium Bile acid symporter family B856_00235 PF01554 MatE B856_00240 PF04463 B856_00240 B856_00245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_00245 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal B856_00250 PF01614 Bacterial transcriptional regulator B856_00250 PF09339 IclR helix-turn-helix domain B856_00255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_00260 PF02798 Glutathione S-transferase, N-terminal domain B856_00260 PF14497 Glutathione S-transferase, C-terminal domain B856_00265 PF01557 Fumarylacetoacetate (FAA) hydrolase family B856_00265 PF09298 Fumarylacetoacetase N-terminal B856_00270 PF00324 Amino acid permease B856_00275 PF08291 Peptidase M15 B856_00280 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_00280 PF07683 Cobalamin synthesis protein cobW C-terminal domain B856_00285 PF01757 B856_00285 B856_00290 PF00392 Bacterial regulatory proteins, gntR family B856_00290 PF07702 UTRA domain B856_00295 PF05962 HutD B856_00300 PF01175 Urocanase B856_00300 PF17391 B856_00300 B856_00300 PF17392 B856_00300 B856_00305 PF00221 Aromatic amino acid lyase B856_00310 PF00324 Amino acid permease B856_00315 PF01979 Amidohydrolase family B856_00320 PF00491 Arginase family B856_00325 PF05960 Bacterial protein of unknown function (DUF885) B856_00330 PF13419 Haloacid dehalogenase-like hydrolase B856_00335 PF01177 Asp/Glu/Hydantoin racemase B856_00340 PF01380 SIS domain B856_00340 PF13522 Glutamine amidotransferase domain B856_00345 PF00132 Bacterial transferase hexapeptide (six repeats) B856_00345 PF12804 MobA-like NTP transferase domain B856_00345 PF14602 Hexapeptide repeat of succinyl-transferase B856_00350 PF04608 Phosphatidylglycerophosphatase A B856_00355 PF00586 AIR synthase related protein, N-terminal domain B856_00355 PF02769 AIR synthase related protein, C-terminal domain B856_00360 PF01029 NusB family B856_00365 PF00885 6,7-dimethyl-8-ribityllumazine synthase B856_00370 PF00925 GTP cyclohydrolase II B856_00370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B856_00380 PF12710 haloacid dehalogenase-like hydrolase B856_00380 PF13740 ACT domain B856_00395 PF02580 D-Tyr-tRNA(Tyr) deacylase B856_00400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B856_00405 PF00581 Rhodanese-like domain B856_00410 PF02666 B856_00410 B856_00415 PF03069 Acetamidase/Formamidase family B856_00425 PF13531 Bacterial extracellular solute-binding protein B856_00430 PF03583 Secretory lipase B856_00435 PF00512 His Kinase A (phospho-acceptor) domain B856_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_00435 PF11808 B856_00435 B856_00435 PF13188 PAS domain B856_00440 PF00072 Response regulator receiver domain B856_00440 PF00486 Transcriptional regulatory protein, C terminal B856_00450 PF00106 short chain dehydrogenase B856_00455 PF01554 MatE B856_00460 PF00155 Aminotransferase class I and II B856_00465 PF04286 B856_00465 B856_00475 PF06041 Bacterial protein of unknown function (DUF924) B856_00480 PF04262 Glutamate-cysteine ligase B856_00485 PF02600 Disulfide bond formation protein DsbB B856_00490 PF05954 Phage late control gene D protein (GPD) B856_00490 PF10106 B856_00490 B856_00490 PF13296 B856_00490 B856_00495 PF01476 LysM domain B856_00495 PF01551 Peptidase family M23 B856_00505 PF07819 PGAP1-like protein B856_00510 PF05728 Uncharacterised protein family (UPF0227) B856_00515 PF00204 DNA gyrase B B856_00515 PF00986 DNA gyrase B subunit, carboxyl terminus B856_00515 PF01751 Toprim domain B856_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_00525 PF00106 short chain dehydrogenase B856_00530 PF04115 Ureidoglycolate hydrolase B856_00535 PF03561 Allantoicase repeat B856_00540 PF01494 FAD binding domain B856_00545 PF03502 Nucleoside-specific channel-forming protein, Tsx B856_00550 PF00860 Permease family B856_00555 PF00576 HIUase/Transthyretin family B856_00560 PF09349 OHCU decarboxylase B856_00565 PF01522 Polysaccharide deacetylase B856_00570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B856_00580 PF13557 B856_00580 B856_00585 PF00085 Thioredoxin B856_00585 PF02683 B856_00585 B856_00585 PF11412 Disulphide bond corrector protein DsbC B856_00590 PF00990 GGDEF domain B856_00595 PF07859 alpha/beta hydrolase fold B856_00600 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) B856_00605 PF03960 ArsC family B856_00610 PF03372 Endonuclease/Exonuclease/phosphatase family B856_00615 PF00156 Phosphoribosyl transferase domain B856_00620 PF00593 TonB dependent receptor B856_00620 PF07715 TonB-dependent Receptor Plug Domain B856_00625 PF08410 B856_00625 B856_00630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain B856_00630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain B856_00635 PF03033 Glycosyltransferase family 28 N-terminal domain B856_00635 PF04101 Glycosyltransferase family 28 C-terminal domain B856_00640 PF01225 Mur ligase family, catalytic domain B856_00640 PF02875 Mur ligase family, glutamate ligase domain B856_00640 PF08245 Mur ligase middle domain B856_00645 PF01820 D-ala D-ala ligase N-terminus B856_00645 PF07478 D-ala D-ala ligase C-terminus B856_00650 PF03799 Cell division protein FtsQ B856_00650 PF08478 POTRA domain, FtsQ-type B856_00655 PF02491 SHS2 domain inserted in FTSA B856_00655 PF14450 Cell division protein FtsA B856_00660 PF00091 Tubulin/FtsZ family, GTPase domain B856_00660 PF12327 FtsZ family, C-terminal domain B856_00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B856_00670 PF05258 B856_00670 B856_00675 PF01551 Peptidase family M23 B856_00680 PF00456 Transketolase, thiamine diphosphate binding domain B856_00685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_00685 PF00364 Biotin-requiring enzyme B856_00685 PF02817 e3 binding domain B856_00695 PF01169 B856_00695 B856_00700 PF00593 TonB dependent receptor B856_00700 PF07715 TonB-dependent Receptor Plug Domain B856_00705 PF00753 Metallo-beta-lactamase superfamily B856_00710 PF03692 B856_00710 B856_00715 PF00478 IMP dehydrogenase / GMP reductase domain B856_00715 PF00571 CBS domain B856_00720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B856_00720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_00720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_00720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_00725 PF01243 Pyridoxamine 5'-phosphate oxidase B856_00725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B856_00730 PF01368 DHH family B856_00730 PF02272 DHHA1 domain B856_00735 PF16956 B856_00735 B856_00740 PF00472 RF-1 domain B856_00740 PF03462 PCRF domain B856_00745 PF12840 Helix-turn-helix domain B856_00750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_00755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) B856_00760 PF04452 RNA methyltransferase B856_00765 PF00924 Mechanosensitive ion channel B856_00770 PF05656 B856_00770 B856_00775 PF00501 AMP-binding enzyme B856_00775 PF13193 AMP-binding enzyme C-terminal domain B856_00775 PF16177 B856_00775 B856_00780 PF00857 Isochorismatase family B856_00785 PF13412 Winged helix-turn-helix DNA-binding B856_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_00795 PF03466 LysR substrate binding domain B856_00800 PF00202 Aminotransferase class-III B856_00805 PF00171 Aldehyde dehydrogenase family B856_00810 PF00324 Amino acid permease B856_00815 PF09939 B856_00815 B856_00825 PF02585 GlcNAc-PI de-N-acetylase B856_00830 PF05401 Nodulation protein S (NodS) B856_00835 PF00535 Glycosyl transferase family 2 B856_00840 PF04076 Bacterial OB fold (BOF) protein B856_00845 PF04940 Sensors of blue-light using FAD B856_00855 PF01810 B856_00855 B856_00860 PF02311 AraC-like ligand binding domain B856_00860 PF12833 Helix-turn-helix domain B856_00865 PF00561 alpha/beta hydrolase fold B856_00870 PF03616 B856_00870 B856_00875 PF05673 Protein of unknown function (DUF815) B856_00880 PF00392 Bacterial regulatory proteins, gntR family B856_00880 PF07729 FCD domain B856_00890 PF00440 Bacterial regulatory proteins, tetR family B856_00895 PF05229 B856_00895 B856_00900 PF05229 B856_00900 B856_00905 PF05229 B856_00905 B856_00910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain B856_00915 PF00577 Outer membrane usher protein B856_00915 PF13953 PapC C-terminal domain B856_00920 PF05229 B856_00920 B856_00930 PF00083 Sugar (and other) transporter B856_00930 PF08946 Osmosensory transporter coiled coil B856_00940 PF00440 Bacterial regulatory proteins, tetR family B856_00945 PF00892 EamA-like transporter family B856_00950 PF00155 Aminotransferase class I and II B856_00955 PF02080 TrkA-C domain B856_00955 PF06826 B856_00955 B856_00960 PF04403 B856_00960 B856_00965 PF04403 B856_00965 B856_00970 PF02470 B856_00970 B856_00975 PF03886 Protein of unknown function (DUF330) B856_00990 PF01343 Peptidase family S49 B856_00990 PF08496 B856_00990 B856_00995 PF00005 ABC transporter B856_01000 PF00528 Binding-protein-dependent transport system inner membrane component B856_01000 PF11812 B856_01000 B856_01005 PF00528 Binding-protein-dependent transport system inner membrane component B856_01005 PF12501 B856_01005 B856_01010 PF12849 PBP superfamily domain B856_01015 PF00324 Amino acid permease B856_01020 PF00205 Thiamine pyrophosphate enzyme, central domain B856_01020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_01020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_01025 PF01037 AsnC family B856_01025 PF13404 AsnC-type helix-turn-helix domain B856_01030 PF00171 Aldehyde dehydrogenase family B856_01035 PF00282 Pyridoxal-dependent decarboxylase conserved domain B856_01040 PF00202 Aminotransferase class-III B856_01045 PF04402 Protein of unknown function (DUF541) B856_01050 PF00440 Bacterial regulatory proteins, tetR family B856_01055 PF14539 Domain of unknown function (DUF4442) B856_01060 PF00487 B856_01060 B856_01065 PF00175 Oxidoreductase NAD-binding domain B856_01065 PF00970 Oxidoreductase FAD-binding domain B856_01070 PF00440 Bacterial regulatory proteins, tetR family B856_01075 PF01594 B856_01075 B856_01080 PF00176 SNF2 family N-terminal domain B856_01080 PF00271 Helicase conserved C-terminal domain B856_01080 PF12137 RNA polymerase recycling family C-terminal B856_01085 PF00849 RNA pseudouridylate synthase B856_01095 PF00202 Aminotransferase class-III B856_01100 PF02581 Thiamine monophosphate synthase/TENI B856_01105 PF06127 B856_01105 B856_01110 PF01928 CYTH domain B856_01110 PF05235 CHAD domain B856_01120 PF11342 Protein of unknown function (DUF3144) B856_01125 PF00675 Insulinase (Peptidase family M16) B856_01125 PF05193 Peptidase M16 inactive domain B856_01130 PF02567 Phenazine biosynthesis-like protein B856_01135 PF00375 Sodium:dicarboxylate symporter family B856_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_01140 PF03466 LysR substrate binding domain B856_01145 PF06779 B856_01145 B856_01160 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_01165 PF00849 RNA pseudouridylate synthase B856_01170 PF03971 Monomeric isocitrate dehydrogenase B856_01175 PF05299 M61 glycyl aminopeptidase B856_01180 PF00768 D-alanyl-D-alanine carboxypeptidase B856_01185 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_01190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_01195 PF00875 DNA photolyase B856_01195 PF03441 FAD binding domain of DNA photolyase B856_01210 PF13641 Glycosyltransferase like family 2 B856_01225 PF02350 UDP-N-acetylglucosamine 2-epimerase B856_01235 PF01988 B856_01235 B856_01240 PF03060 Nitronate monooxygenase B856_01245 PF01207 Dihydrouridine synthase (Dus) B856_01250 PF07759 B856_01250 B856_01255 PF12710 haloacid dehalogenase-like hydrolase B856_01260 PF00696 Amino acid kinase family B856_01260 PF01472 PUA domain B856_01265 PF01018 GTP1/OBG B856_01265 PF01926 50S ribosome-binding GTPase B856_01280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_01280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B856_01285 PF00892 EamA-like transporter family B856_01290 PF08212 Lipocalin-like domain B856_01295 PF00271 Helicase conserved C-terminal domain B856_01295 PF02151 UvrB/uvrC motif B856_01295 PF04851 Type III restriction enzyme, res subunit B856_01295 PF12344 Ultra-violet resistance protein B B856_01305 PF00990 GGDEF domain B856_01305 PF13188 PAS domain B856_01315 PF00155 Aminotransferase class I and II B856_01320 PF04828 Glutathione-dependent formaldehyde-activating enzyme B856_01325 PF03061 Thioesterase superfamily B856_01340 PF00106 short chain dehydrogenase B856_01345 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) B856_01350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ B856_01355 PF02565 Recombination protein O C terminal B856_01355 PF11967 Recombination protein O N terminal B856_01365 PF01926 50S ribosome-binding GTPase B856_01365 PF07650 KH domain B856_01370 PF00035 Double-stranded RNA binding motif B856_01370 PF14622 Ribonuclease-III-like B856_01375 PF16137 B856_01375 B856_01380 PF00717 Peptidase S24-like B856_01380 PF10502 Signal peptidase, peptidase S26 B856_01385 PF00009 Elongation factor Tu GTP binding domain B856_01385 PF00679 Elongation factor G C-terminus B856_01385 PF03144 Elongation factor Tu domain 2 B856_01385 PF06421 GTP-binding protein LepA C-terminus B856_01390 PF13279 Thioesterase-like superfamily B856_01395 PF13180 PDZ domain B856_01395 PF13365 Trypsin-like peptidase domain B856_01400 PF00890 FAD binding domain B856_01400 PF02910 Fumarate reductase flavoprotein C-term B856_01405 PF03061 Thioesterase superfamily B856_01410 PF02223 Thymidylate kinase B856_01415 PF02618 YceG-like family B856_01420 PF01063 Aminotransferase class IV B856_01425 PF13531 Bacterial extracellular solute-binding protein B856_01430 PF06821 Serine hydrolase B856_01435 PF00528 Binding-protein-dependent transport system inner membrane component B856_01440 PF00528 Binding-protein-dependent transport system inner membrane component B856_01445 PF00005 ABC transporter B856_01445 PF12857 B856_01445 B856_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_01450 PF03466 LysR substrate binding domain B856_01460 PF00132 Bacterial transferase hexapeptide (six repeats) B856_01460 PF14602 Hexapeptide repeat of succinyl-transferase B856_01460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal B856_01465 PF04055 Radical SAM superfamily B856_01465 PF13394 4Fe-4S single cluster domain B856_01470 PF06508 Queuosine biosynthesis protein QueC B856_01480 PF01902 ATP-binding region B856_01485 PF00578 AhpC/TSA family B856_01490 PF00188 Cysteine-rich secretory protein family B856_01495 PF01467 Cytidylyltransferase B856_01500 PF00378 Enoyl-CoA hydratase/isomerase family B856_01515 PF07690 Major Facilitator Superfamily B856_01520 PF02769 AIR synthase related protein, C-terminal domain B856_01520 PF13507 CobB/CobQ-like glutamine amidotransferase domain B856_01525 PF01966 HD domain B856_01530 PF01330 RuvA N terminal domain B856_01530 PF07499 RuvA, C-terminal domain B856_01530 PF14520 Helix-hairpin-helix domain B856_01535 PF05491 Holliday junction DNA helicase ruvB C-terminus B856_01535 PF05496 Holliday junction DNA helicase ruvB N-terminus B856_01540 PF01546 Peptidase family M20/M25/M40 B856_01540 PF07687 Peptidase dimerisation domain B856_01545 PF03061 Thioesterase superfamily B856_01550 PF01618 B856_01550 B856_01555 PF02472 Biopolymer transport protein ExbD/TolR B856_01560 PF13103 TonB C terminal B856_01565 PF04052 TolB amino-terminal domain B856_01565 PF07676 WD40-like Beta Propeller Repeat B856_01570 PF00691 OmpA family B856_01580 PF00316 Fructose-1-6-bisphosphatase B856_01585 PF00588 SpoU rRNA Methylase family B856_01590 PF04542 Sigma-70 region 2 B856_01590 PF08281 Sigma-70, region 4 B856_01600 PF11304 B856_01600 B856_01615 PF00308 Bacterial dnaA protein B856_01620 PF01594 B856_01620 B856_01625 PF00586 AIR synthase related protein, N-terminal domain B856_01625 PF02769 AIR synthase related protein, C-terminal domain B856_01630 PF00551 Formyl transferase B856_01635 PF12697 Alpha/beta hydrolase family B856_01640 PF01343 Peptidase family S49 B856_01645 PF03279 B856_01645 B856_01650 PF00753 Metallo-beta-lactamase superfamily B856_01650 PF03772 B856_01650 B856_01650 PF13567 B856_01650 B856_01655 PF00005 ABC transporter B856_01660 PF02687 B856_01660 B856_01660 PF12704 MacB-like periplasmic core domain B856_01665 PF00892 EamA-like transporter family B856_01670 PF02639 B856_01670 B856_01680 PF00266 Aminotransferase class-V B856_01685 PF02321 Outer membrane efflux protein B856_01690 PF16576 B856_01690 B856_01695 PF12698 ABC-2 family transporter protein B856_01700 PF12698 ABC-2 family transporter protein B856_01705 PF04794 YdjC-like protein B856_01710 PF00535 Glycosyl transferase family 2 B856_01715 PF04138 B856_01715 B856_01720 PF13231 B856_01720 B856_01725 PF00521 DNA gyrase/topoisomerase IV, subunit A B856_01725 PF03989 DNA gyrase C-terminal domain, beta-propeller B856_01730 PF00766 Electron transfer flavoprotein FAD-binding domain B856_01730 PF01012 Electron transfer flavoprotein domain B856_01735 PF01012 Electron transfer flavoprotein domain B856_01740 PF00589 Phage integrase family B856_01740 PF02899 Phage integrase, N-terminal SAM-like domain B856_01745 PF01810 B856_01745 B856_01750 PF01678 Diaminopimelate epimerase B856_01755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B856_01755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B856_01765 PF00324 Amino acid permease B856_01770 PF06745 KaiC B856_01770 PF13541 Subunit ChlI of Mg-chelatase B856_01775 PF04280 Tim44-like domain B856_01780 PF00152 tRNA synthetases class II (D, K and N) B856_01785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_01785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_01785 PF11890 Domain of unknown function (DUF3410) B856_01790 PF06803 B856_01790 B856_01795 PF02634 FdhD/NarQ family B856_01800 PF00384 Molybdopterin oxidoreductase B856_01800 PF01568 Molydopterin dinucleotide binding domain B856_01805 PF02595 Glycerate kinase family B856_01810 PF00440 Bacterial regulatory proteins, tetR family B856_01815 PF00106 short chain dehydrogenase B856_01820 PF00881 Nitroreductase family B856_01825 PF00440 Bacterial regulatory proteins, tetR family B856_01830 PF10118 B856_01830 B856_01835 PF00440 Bacterial regulatory proteins, tetR family B856_01845 PF00501 AMP-binding enzyme B856_01845 PF00550 Phosphopantetheine attachment site B856_01845 PF13193 AMP-binding enzyme C-terminal domain B856_01850 PF14534 Domain of unknown function (DUF4440) B856_01860 PF01272 Transcription elongation factor, GreA/GreB, C-term B856_01860 PF03449 Transcription elongation factor, N-terminal B856_01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_01865 PF01464 Transglycosylase SLT domain B856_01870 PF02036 SCP-2 sterol transfer family B856_01875 PF01171 PP-loop family B856_01880 PF01464 Transglycosylase SLT domain B856_01885 PF01435 Peptidase family M48 B856_01890 PF13430 B856_01890 B856_01895 PF00873 AcrB/AcrD/AcrF family B856_01900 PF03009 Glycerophosphoryl diester phosphodiesterase family B856_01905 PF00753 Metallo-beta-lactamase superfamily B856_01910 PF01219 Prokaryotic diacylglycerol kinase B856_01915 PF00118 TCP-1/cpn60 chaperonin family B856_01920 PF00166 Chaperonin 10 Kd subunit B856_01925 PF12245 Bacterial Ig-like domain (group 3) B856_01935 PF03734 L,D-transpeptidase catalytic domain B856_01940 PF04304 B856_01940 B856_01945 PF08907 B856_01945 B856_01950 PF08085 B856_01950 B856_01955 PF01546 Peptidase family M20/M25/M40 B856_01955 PF07687 Peptidase dimerisation domain B856_01965 PF00072 Response regulator receiver domain B856_01965 PF01584 CheW-like domain B856_01965 PF01627 Hpt domain B856_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B856_01975 PF01584 CheW-like domain B856_01980 PF00072 Response regulator receiver domain B856_01985 PF00072 Response regulator receiver domain B856_01995 PF13437 HlyD family secretion protein B856_01995 PF13533 Biotin-lipoyl like B856_02000 PF00873 AcrB/AcrD/AcrF family B856_02005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_02005 PF03129 Anticodon binding domain B856_02005 PF04073 Aminoacyl-tRNA editing domain B856_02010 PF07411 Domain of unknown function (DUF1508) B856_02015 PF03831 PhnA protein B856_02015 PF08274 PhnA Zinc-Ribbon B856_02020 PF04343 B856_02020 B856_02025 PF08327 Activator of Hsp90 ATPase homolog 1-like protein B856_02030 PF01571 Aminomethyltransferase folate-binding domain B856_02035 PF10411 Disulfide bond isomerase protein N-terminus B856_02035 PF13098 Thioredoxin-like domain B856_02040 PF08238 Sel1 repeat B856_02045 PF03547 B856_02045 B856_02050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_02055 PF00593 TonB dependent receptor B856_02060 PF00871 Acetokinase family B856_02065 PF01515 Phosphate acetyl/butaryl transferase B856_02065 PF07085 DRTGG domain B856_02065 PF13500 AAA domain B856_02070 PF05681 B856_02070 B856_02070 PF05683 Fumarase C-terminus B856_02075 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) B856_02080 PF11008 B856_02080 B856_02085 PF06689 ClpX C4-type zinc finger B856_02085 PF07724 AAA domain (Cdc48 subfamily) B856_02085 PF10431 C-terminal, D2-small domain, of ClpB protein B856_02090 PF00574 Clp protease B856_02095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_02095 PF05697 Bacterial trigger factor protein (TF) B856_02095 PF05698 Bacterial trigger factor protein (TF) C-terminus B856_02100 PF00593 TonB dependent receptor B856_02100 PF07715 TonB-dependent Receptor Plug Domain B856_02105 PF13640 2OG-Fe(II) oxygenase superfamily B856_02110 PF00682 HMGL-like B856_02110 PF08502 LeuA allosteric (dimerisation) domain B856_02115 PF00561 alpha/beta hydrolase fold B856_02120 PF07021 Methionine biosynthesis protein MetW B856_02125 PF08238 Sel1 repeat B856_02130 PF01725 Ham1 family B856_02140 PF02416 mttA/Hcf106 family B856_02145 PF02416 mttA/Hcf106 family B856_02150 PF00902 Sec-independent protein translocase protein (TatC) B856_02155 PF05787 Bacterial protein of unknown function (DUF839) B856_02160 PF05787 Bacterial protein of unknown function (DUF839) B856_02165 PF05742 B856_02165 B856_02170 PF01790 B856_02170 B856_02185 PF00303 Thymidylate synthase B856_02190 PF00186 Dihydrofolate reductase B856_02195 PF13387 B856_02195 B856_02200 PF01625 Peptide methionine sulfoxide reductase B856_02205 PF02472 Biopolymer transport protein ExbD/TolR B856_02210 PF01618 B856_02210 B856_02215 PF03544 Gram-negative bacterial TonB protein C-terminal B856_02220 PF00551 Formyl transferase B856_02220 PF01842 ACT domain B856_02225 PF00440 Bacterial regulatory proteins, tetR family B856_02225 PF13972 Bacterial transcriptional repressor B856_02230 PF00171 Aldehyde dehydrogenase family B856_02235 PF00830 Ribosomal L28 family B856_02240 PF00471 Ribosomal protein L33 B856_02245 PF00999 Sodium/hydrogen exchanger family B856_02245 PF02254 TrkA-N domain B856_02265 PF00076 RNA recognition motif B856_02270 PF00580 UvrD/REP helicase N-terminal domain B856_02270 PF13361 UvrD-like helicase C-terminal domain B856_02275 PF03729 B856_02275 B856_02285 PF01131 DNA topoisomerase B856_02285 PF01396 B856_02285 B856_02285 PF01751 Toprim domain B856_02285 PF08272 Topoisomerase I zinc-ribbon-like B856_02295 PF01638 HxlR-like helix-turn-helix B856_02300 PF08240 Alcohol dehydrogenase GroES-like domain B856_02300 PF13602 Zinc-binding dehydrogenase B856_02305 PF04102 SlyX B856_02310 PF00005 ABC transporter B856_02310 PF12848 ABC transporter B856_02310 PF16326 B856_02310 B856_02315 PF01810 B856_02315 B856_02320 PF03279 B856_02320 B856_02325 PF00534 Glycosyl transferases group 1 B856_02325 PF13439 Glycosyltransferase Family 4 B856_02330 PF00375 Sodium:dicarboxylate symporter family B856_02335 PF03372 Endonuclease/Exonuclease/phosphatase family B856_02340 PF01118 Semialdehyde dehydrogenase, NAD binding domain B856_02340 PF02774 Semialdehyde dehydrogenase, dimerisation domain B856_02355 PF00710 Asparaginase B856_02360 PF01416 tRNA pseudouridine synthase B856_02365 PF12625 B856_02365 B856_02365 PF12833 Helix-turn-helix domain B856_02370 PF01176 Translation initiation factor 1A / IF-1 B856_02375 PF07007 Protein of unknown function (DUF1311) B856_02385 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_02395 PF00694 Aconitase C-terminal domain B856_02400 PF00330 Aconitase family (aconitate hydratase) B856_02405 PF09834 B856_02405 B856_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02410 PF03466 LysR substrate binding domain B856_02425 PF12710 haloacid dehalogenase-like hydrolase B856_02430 PF00293 NUDIX domain B856_02435 PF00391 PEP-utilising enzyme, mobile domain B856_02435 PF02896 PEP-utilising enzyme, TIM barrel domain B856_02435 PF05524 PEP-utilising enzyme, N-terminal B856_02435 PF13185 GAF domain B856_02440 PF00141 Peroxidase B856_02445 PF12706 Beta-lactamase superfamily domain B856_02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02450 PF03466 LysR substrate binding domain B856_02455 PF07077 B856_02455 B856_02460 PF02798 Glutathione S-transferase, N-terminal domain B856_02460 PF14497 Glutathione S-transferase, C-terminal domain B856_02465 PF08279 HTH domain B856_02465 PF13280 B856_02465 B856_02470 PF13419 Haloacid dehalogenase-like hydrolase B856_02475 PF00849 RNA pseudouridylate synthase B856_02475 PF01479 S4 domain B856_02480 PF00575 S1 RNA binding domain B856_02480 PF10150 Ribonuclease E/G family B856_02485 PF00501 AMP-binding enzyme B856_02485 PF13193 AMP-binding enzyme C-terminal domain B856_02495 PF02677 B856_02495 B856_02500 PF00583 Acetyltransferase (GNAT) family B856_02505 PF06224 B856_02505 B856_02510 PF07690 Major Facilitator Superfamily B856_02515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B856_02520 PF12796 Ankyrin repeats (3 copies) B856_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02525 PF03466 LysR substrate binding domain B856_02530 PF13539 D-alanyl-D-alanine carboxypeptidase B856_02540 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) B856_02545 PF05936 B856_02545 B856_02550 PF06812 B856_02550 B856_02555 PF00004 ATPase family associated with various cellular activities (AAA) B856_02555 PF07724 AAA domain (Cdc48 subfamily) B856_02555 PF10431 C-terminal, D2-small domain, of ClpB protein B856_02560 PF05488 PAAR motif B856_02565 PF00691 OmpA family B856_02570 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) B856_02575 PF06744 B856_02575 B856_02575 PF06761 B856_02575 B856_02575 PF14331 B856_02575 B856_02585 PF06996 B856_02585 B856_02590 PF05947 B856_02590 B856_02595 PF04965 Gene 25-like lysozyme B856_02600 PF05638 Protein of unknown function (DUF796) B856_02605 PF05943 B856_02605 B856_02610 PF05591 B856_02610 B856_02625 PF00528 Binding-protein-dependent transport system inner membrane component B856_02630 PF00005 ABC transporter B856_02635 PF09084 NMT1/THI5 like B856_02640 PF01425 Amidase B856_02645 PF08753 NikR C terminal nickel binding domain B856_02665 PF02525 Flavodoxin-like fold B856_02670 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B856_02670 PF00364 Biotin-requiring enzyme B856_02670 PF02626 Allophanate hydrolase subunit 2 B856_02670 PF02682 Allophanate hydrolase subunit 1 B856_02670 PF02785 Biotin carboxylase C-terminal domain B856_02670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_02675 PF09347 Domain of unknown function (DUF1989) B856_02680 PF09347 Domain of unknown function (DUF1989) B856_02685 PF08240 Alcohol dehydrogenase GroES-like domain B856_02685 PF13823 Alcohol dehydrogenase GroES-associated B856_02690 PF10604 Polyketide cyclase / dehydrase and lipid transport B856_02695 PF00440 Bacterial regulatory proteins, tetR family B856_02715 PF08238 Sel1 repeat B856_02720 PF00654 Voltage gated chloride channel B856_02725 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B856_02725 PF00364 Biotin-requiring enzyme B856_02725 PF02785 Biotin carboxylase C-terminal domain B856_02725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_02730 PF02626 Allophanate hydrolase subunit 2 B856_02730 PF02682 Allophanate hydrolase subunit 1 B856_02735 PF07286 Protein of unknown function (DUF1445) B856_02740 PF03746 LamB/YcsF family B856_02745 PF01566 B856_02745 B856_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_02750 PF03466 LysR substrate binding domain B856_02765 PF03527 B856_02765 B856_02765 PF05593 B856_02765 B856_02765 PF15636 B856_02765 B856_02770 PF05954 Phage late control gene D protein (GPD) B856_02770 PF10106 B856_02770 B856_02770 PF13296 B856_02770 B856_02775 PF13354 Beta-lactamase enzyme family B856_02780 PF13419 Haloacid dehalogenase-like hydrolase B856_02785 PF00583 Acetyltransferase (GNAT) family B856_02795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_02795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_02800 PF08856 B856_02800 B856_02805 PF07739 TipAS antibiotic-recognition domain B856_02805 PF13411 MerR HTH family regulatory protein B856_02810 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) B856_02815 PF07690 Major Facilitator Superfamily B856_02820 PF00440 Bacterial regulatory proteins, tetR family B856_02830 PF03279 B856_02830 B856_02835 PF00563 EAL domain B856_02840 PF00892 EamA-like transporter family B856_02845 PF01037 AsnC family B856_02845 PF13404 AsnC-type helix-turn-helix domain B856_02855 PF00488 MutS domain V B856_02855 PF01624 MutS domain I B856_02855 PF05188 MutS domain II B856_02855 PF05190 MutS family domain IV B856_02855 PF05192 MutS domain III B856_02860 PF13673 Acetyltransferase (GNAT) domain B856_02865 PF00037 4Fe-4S binding domain B856_02865 PF11953 Domain of unknown function (DUF3470) B856_02870 PF08291 Peptidase M15 B856_02875 PF01596 O-methyltransferase B856_02880 PF00582 Universal stress protein family B856_02885 PF00132 Bacterial transferase hexapeptide (six repeats) B856_02885 PF14602 Hexapeptide repeat of succinyl-transferase B856_02890 PF01205 Uncharacterized protein family UPF0029 B856_02890 PF09186 Domain of unknown function (DUF1949) B856_02895 PF13437 HlyD family secretion protein B856_02895 PF13533 Biotin-lipoyl like B856_02900 PF00005 ABC transporter B856_02900 PF00664 ABC transporter transmembrane region B856_02905 PF02321 Outer membrane efflux protein B856_02910 PF00005 ABC transporter B856_02910 PF12399 Branched-chain amino acid ATP-binding cassette transporter B856_02915 PF03968 OstA-like protein B856_02920 PF06835 Lipopolysaccharide-assembly, LptC-related B856_02925 PF08282 haloacid dehalogenase-like hydrolase B856_02930 PF00571 CBS domain B856_02930 PF01380 SIS domain B856_02935 PF01406 tRNA synthetases class I (C) catalytic domain B856_02935 PF09190 DALR domain B856_02950 PF13628 B856_02950 B856_02965 PF01638 HxlR-like helix-turn-helix B856_02970 PF07690 Major Facilitator Superfamily B856_02975 PF04233 B856_02975 B856_02995 PF03807 NADP oxidoreductase coenzyme F420-dependent B856_02995 PF14748 Pyrroline-5-carboxylate reductase dimerisation B856_03005 PF00313 'Cold-shock' DNA-binding domain B856_03010 PF01810 B856_03010 B856_03015 PF05838 Glycosyl hydrolase 108 B856_03015 PF09374 Predicted Peptidoglycan domain B856_03030 PF00717 Peptidase S24-like B856_03030 PF01381 Helix-turn-helix B856_03045 PF02601 B856_03045 B856_03045 PF13742 B856_03045 B856_03050 PF02609 Exonuclease VII small subunit B856_03060 PF01810 B856_03060 B856_03070 PF03860 Domain of Unknown Function (DUF326) B856_03075 PF04828 Glutathione-dependent formaldehyde-activating enzyme B856_03080 PF00376 MerR family regulatory protein B856_03080 PF09278 MerR, DNA binding B856_03085 PF00122 E1-E2 ATPase B856_03085 PF00403 Heavy-metal-associated domain B856_03085 PF00702 haloacid dehalogenase-like hydrolase B856_03090 PF00403 Heavy-metal-associated domain B856_03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03095 PF03466 LysR substrate binding domain B856_03100 PF00355 Rieske [2Fe-2S] domain B856_03100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_03105 PF00866 Ring hydroxylating beta subunit B856_03110 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_03110 PF00175 Oxidoreductase NAD-binding domain B856_03110 PF00970 Oxidoreductase FAD-binding domain B856_03115 PF00106 short chain dehydrogenase B856_03120 PF03594 B856_03120 B856_03125 PF07690 Major Facilitator Superfamily B856_03130 PF03573 outer membrane porin, OprD family B856_03135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B856_03135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B856_03140 PF00270 DEAD/DEAH box helicase B856_03140 PF00271 Helicase conserved C-terminal domain B856_03140 PF04408 Helicase associated domain (HA2) B856_03140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold B856_03140 PF11898 B856_03140 B856_03145 PF00578 AhpC/TSA family B856_03145 PF10417 C-terminal domain of 1-Cys peroxiredoxin B856_03150 PF13619 B856_03150 B856_03155 PF01596 O-methyltransferase B856_03160 PF07866 Protein of unknown function (DUF1653) B856_03165 PF12568 Acetyltransferase (GNAT) domain B856_03170 PF00475 Imidazoleglycerol-phosphate dehydratase B856_03175 PF00117 Glutamine amidotransferase class-I B856_03180 PF05656 B856_03180 B856_03185 PF01612 3'-5' exonuclease B856_03190 PF00977 Histidine biosynthesis protein B856_03195 PF01381 Helix-turn-helix B856_03195 PF07883 Cupin domain B856_03200 PF00892 EamA-like transporter family B856_03205 PF03992 Antibiotic biosynthesis monooxygenase B856_03215 PF00313 'Cold-shock' DNA-binding domain B856_03215 PF06961 B856_03215 B856_03220 PF01636 Phosphotransferase enzyme family B856_03225 PF00977 Histidine biosynthesis protein B856_03235 PF12625 B856_03235 B856_03235 PF12833 Helix-turn-helix domain B856_03240 PF00230 Major intrinsic protein B856_03250 PF01810 B856_03250 B856_03255 PF01223 DNA/RNA non-specific endonuclease B856_03265 PF02705 B856_03265 B856_03285 PF02525 Flavodoxin-like fold B856_03290 PF01638 HxlR-like helix-turn-helix B856_03310 PF08238 Sel1 repeat B856_03315 PF00440 Bacterial regulatory proteins, tetR family B856_03320 PF12833 Helix-turn-helix domain B856_03325 PF00248 Aldo/keto reductase family B856_03340 PF00892 EamA-like transporter family B856_03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03345 PF03466 LysR substrate binding domain B856_03350 PF07690 Major Facilitator Superfamily B856_03360 PF04828 Glutathione-dependent formaldehyde-activating enzyme B856_03365 PF13489 Methyltransferase domain B856_03370 PF01593 Flavin containing amine oxidoreductase B856_03375 PF02678 Pirin B856_03375 PF05726 Pirin C-terminal cupin domain B856_03380 PF00857 Isochorismatase family B856_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_03385 PF03466 LysR substrate binding domain B856_03390 PF00171 Aldehyde dehydrogenase family B856_03395 PF00202 Aminotransferase class-III B856_03400 PF00155 Aminotransferase class I and II B856_03400 PF00392 Bacterial regulatory proteins, gntR family B856_03405 PF00324 Amino acid permease B856_03410 PF01381 Helix-turn-helix B856_03410 PF07883 Cupin domain B856_03415 PF03591 B856_03415 B856_03420 PF05437 B856_03420 B856_03425 PF00436 Single-strand binding protein family B856_03430 PF07690 Major Facilitator Superfamily B856_03435 PF04332 B856_03435 B856_03440 PF03070 TENA/THI-4/PQQC family B856_03445 PF06942 B856_03445 B856_03450 PF06993 B856_03450 B856_03455 PF00107 Zinc-binding dehydrogenase B856_03455 PF08240 Alcohol dehydrogenase GroES-like domain B856_03460 PF00440 Bacterial regulatory proteins, tetR family B856_03460 PF16925 B856_03460 B856_03465 PF00005 ABC transporter B856_03470 PF13401 AAA domain B856_03475 PF00990 GGDEF domain B856_03480 PF16956 B856_03480 B856_03485 PF02028 BCCT family transporter B856_03490 PF07885 Ion channel B856_03495 PF00474 Sodium:solute symporter family B856_03500 PF04341 B856_03500 B856_03505 PF00072 Response regulator receiver domain B856_03505 PF00512 His Kinase A (phospho-acceptor) domain B856_03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_03505 PF12860 B856_03505 B856_03515 PF00072 Response regulator receiver domain B856_03515 PF00196 Bacterial regulatory proteins, luxR family B856_03520 PF03358 NADPH-dependent FMN reductase B856_03525 PF00296 Luciferase-like monooxygenase B856_03530 PF01022 Bacterial regulatory protein, arsR family B856_03535 PF00440 Bacterial regulatory proteins, tetR family B856_03540 PF08007 Cupin superfamily protein B856_03545 PF02545 Maf-like protein B856_03550 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) B856_03555 PF00162 Phosphoglycerate kinase B856_03565 PF01116 Fructose-bisphosphate aldolase class-II B856_03570 PF00639 PPIC-type PPIASE domain B856_03570 PF09312 SurA N-terminal domain B856_03570 PF13616 PPIC-type PPIASE domain B856_03575 PF03968 OstA-like protein B856_03575 PF04453 Organic solvent tolerance protein B856_03580 PF01636 Phosphotransferase enzyme family B856_03585 PF00483 Nucleotidyl transferase B856_03590 PF02527 rRNA small subunit methyltransferase G B856_03595 PF13614 AAA domain B856_03600 PF02195 ParB-like nuclease domain B856_03605 PF01618 B856_03605 B856_03610 PF02472 Biopolymer transport protein ExbD/TolR B856_03615 PF00005 ABC transporter B856_03615 PF00664 ABC transporter transmembrane region B856_03620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B856_03625 PF02348 Cytidylyltransferase B856_03630 PF13177 DNA polymerase III, delta subunit B856_03635 PF07238 PilZ domain B856_03640 PF01026 TatD related DNase B856_03645 PF00440 Bacterial regulatory proteins, tetR family B856_03650 PF07963 Prokaryotic N-terminal methylation motif B856_03655 PF02501 Type II secretion system (T2SS), protein I B856_03655 PF07963 Prokaryotic N-terminal methylation motif B856_03660 PF07963 Prokaryotic N-terminal methylation motif B856_03660 PF11612 Type II secretion system (T2SS), protein J B856_03665 PF03934 Type II secretion system (T2SS), protein K B856_03670 PF01242 6-pyruvoyl tetrahydropterin synthase B856_03675 PF03167 Uracil DNA glycosylase superfamily B856_03680 PF16113 B856_03680 B856_03685 PF14437 B856_03685 B856_03690 PF10604 Polyketide cyclase / dehydrase and lipid transport B856_03695 PF02224 Cytidylate kinase B856_03700 PF00575 S1 RNA binding domain B856_03705 PF00216 Bacterial DNA-binding protein B856_03710 PF06305 B856_03710 B856_03715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B856_03720 PF03956 B856_03720 B856_03725 PF00743 Flavin-binding monooxygenase-like B856_03730 PF12625 B856_03730 B856_03730 PF12833 Helix-turn-helix domain B856_03735 PF03969 AFG1-like ATPase B856_03740 PF01274 Malate synthase B856_03745 PF00583 Acetyltransferase (GNAT) family B856_03750 PF02472 Biopolymer transport protein ExbD/TolR B856_03755 PF02472 Biopolymer transport protein ExbD/TolR B856_03760 PF01618 B856_03760 B856_03765 PF03544 Gram-negative bacterial TonB protein C-terminal B856_03770 PF00593 TonB dependent receptor B856_03770 PF07715 TonB-dependent Receptor Plug Domain B856_03780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B856_03785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B856_03790 PF01432 Peptidase family M3 B856_03795 PF00528 Binding-protein-dependent transport system inner membrane component B856_03800 PF00528 Binding-protein-dependent transport system inner membrane component B856_03800 PF12911 B856_03800 B856_03805 PF00005 ABC transporter B856_03805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B856_03810 PF02586 Uncharacterised ACR, COG2135 B856_03820 PF00459 Inositol monophosphatase family B856_03825 PF00300 Histidine phosphatase superfamily (branch 1) B856_03830 PF01649 Ribosomal protein S20 B856_03835 PF01118 Semialdehyde dehydrogenase, NAD binding domain B856_03840 PF03737 Demethylmenaquinone methyltransferase B856_03845 PF13417 Glutathione S-transferase, N-terminal domain B856_03850 PF04261 Dyp-type peroxidase family B856_03860 PF00270 DEAD/DEAH box helicase B856_03860 PF00271 Helicase conserved C-terminal domain B856_03860 PF02559 CarD-like/TRCF domain B856_03860 PF03461 TRCF domain B856_03865 PF01230 HIT domain B856_03870 PF00211 Adenylate and Guanylate cyclase catalytic domain B856_03875 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_03880 PF00012 Hsp70 protein B856_03885 PF00226 DnaJ domain B856_03885 PF07743 HSCB C-terminal oligomerisation domain B856_03890 PF01521 Iron-sulphur cluster biosynthesis B856_03895 PF01592 NifU-like N terminal domain B856_03900 PF00266 Aminotransferase class-V B856_03905 PF02082 Transcriptional regulator B856_03915 PF05597 B856_03915 B856_03920 PF00216 Bacterial DNA-binding protein B856_03925 PF13616 PPIC-type PPIASE domain B856_03925 PF13624 SurA N-terminal domain B856_03930 PF12833 Helix-turn-helix domain B856_03930 PF12852 Cupin B856_03935 PF00487 B856_03935 B856_03940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_03940 PF02770 Acyl-CoA dehydrogenase, middle domain B856_03945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_03945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_03950 PF03109 B856_03950 B856_03960 PF04073 Aminoacyl-tRNA editing domain B856_03965 PF04183 IucA / IucC family B856_03965 PF06276 Ferric iron reductase FhuF-like transporter B856_03970 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) B856_03975 PF07690 Major Facilitator Superfamily B856_03980 PF04183 IucA / IucC family B856_03980 PF06276 Ferric iron reductase FhuF-like transporter B856_03985 PF04183 IucA / IucC family B856_03985 PF06276 Ferric iron reductase FhuF-like transporter B856_03990 PF11575 B856_03990 B856_03995 PF03737 Demethylmenaquinone methyltransferase B856_04000 PF00593 TonB dependent receptor B856_04000 PF07715 TonB-dependent Receptor Plug Domain B856_04010 PF03929 B856_04010 B856_04020 PF13523 Acetyltransferase (GNAT) domain B856_04025 PF08125 Mannitol dehydrogenase C-terminal domain B856_04025 PF13419 Haloacid dehalogenase-like hydrolase B856_04035 PF13563 2'-5' RNA ligase superfamily B856_04040 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase B856_04045 PF02277 Phosphoribosyltransferase B856_04050 PF00300 Histidine phosphatase superfamily (branch 1) B856_04055 PF00328 Histidine phosphatase superfamily (branch 2) B856_04060 PF02654 B856_04060 B856_04065 PF00793 DAHP synthetase I family B856_04070 PF01925 B856_04070 B856_04080 PF03929 B856_04080 B856_04090 PF00593 TonB dependent receptor B856_04090 PF07715 TonB-dependent Receptor Plug Domain B856_04095 PF02684 B856_04095 B856_04100 PF00440 Bacterial regulatory proteins, tetR family B856_04100 PF09209 Domain of unknown function (DUF1956) B856_04105 PF13437 HlyD family secretion protein B856_04105 PF13533 Biotin-lipoyl like B856_04110 PF00005 ABC transporter B856_04115 PF12698 ABC-2 family transporter protein B856_04120 PF12698 ABC-2 family transporter protein B856_04125 PF10977 B856_04125 B856_04135 PF06078 Bacterial protein of unknown function (DUF937) B856_04140 PF13609 Gram-negative porin B856_04145 PF01230 HIT domain B856_04150 PF13308 YARHG domain B856_04155 PF04828 Glutathione-dependent formaldehyde-activating enzyme B856_04170 PF13103 TonB C terminal B856_04175 PF08241 Methyltransferase domain B856_04180 PF00561 alpha/beta hydrolase fold B856_04185 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_04195 PF02575 YbaB/EbfC DNA-binding family B856_04200 PF02132 RecR protein B856_04200 PF13662 Toprim domain B856_04205 PF00570 HRDC domain B856_04205 PF01612 3'-5' exonuclease B856_04225 PF05166 YcgL domain B856_04235 PF00004 ATPase family associated with various cellular activities (AAA) B856_04240 PF05762 VWA domain containing CoxE-like protein B856_04245 PF00291 Pyridoxal-phosphate dependent enzyme B856_04250 PF05175 Methyltransferase small domain B856_04255 PF01264 Chorismate synthase B856_04260 PF00990 GGDEF domain B856_04265 PF14518 Iron-containing redox enzyme B856_04275 PF04055 Radical SAM superfamily B856_04280 PF00676 Dehydrogenase E1 component B856_04285 PF02779 Transketolase, pyrimidine binding domain B856_04285 PF02780 Transketolase, C-terminal domain B856_04290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_04290 PF00364 Biotin-requiring enzyme B856_04290 PF02817 e3 binding domain B856_04295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_04300 PF00106 short chain dehydrogenase B856_04305 PF00107 Zinc-binding dehydrogenase B856_04305 PF08240 Alcohol dehydrogenase GroES-like domain B856_04310 PF01062 B856_04310 B856_04315 PF00158 Sigma-54 interaction domain B856_04315 PF02954 Bacterial regulatory protein, Fis family B856_04320 PF00753 Metallo-beta-lactamase superfamily B856_04325 PF04273 Putative phosphatase (DUF442) B856_04325 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_04330 PF01925 B856_04330 B856_04335 PF00742 Homoserine dehydrogenase B856_04335 PF03447 Homoserine dehydrogenase, NAD binding domain B856_04340 PF00892 EamA-like transporter family B856_04345 PF12833 Helix-turn-helix domain B856_04350 PF01638 HxlR-like helix-turn-helix B856_04355 PF02525 Flavodoxin-like fold B856_04360 PF02417 B856_04360 B856_04365 PF00392 Bacterial regulatory proteins, gntR family B856_04365 PF07702 UTRA domain B856_04370 PF00890 FAD binding domain B856_04370 PF02910 Fumarate reductase flavoprotein C-term B856_04375 PF12838 4Fe-4S dicluster domain B856_04380 PF13379 NMT1-like family B856_04385 PF00528 Binding-protein-dependent transport system inner membrane component B856_04390 PF00005 ABC transporter B856_04395 PF13646 HEAT repeats B856_04400 PF06155 Protein of unknown function (DUF971) B856_04405 PF00083 Sugar (and other) transporter B856_04405 PF07690 Major Facilitator Superfamily B856_04410 PF00593 TonB dependent receptor B856_04410 PF07715 TonB-dependent Receptor Plug Domain B856_04415 PF00206 Lyase B856_04415 PF10415 Fumarase C C-terminus B856_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04430 PF03466 LysR substrate binding domain B856_04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04435 PF03466 LysR substrate binding domain B856_04440 PF00108 Thiolase, N-terminal domain B856_04440 PF02803 Thiolase, C-terminal domain B856_04445 PF02667 B856_04445 B856_04450 PF01144 Coenzyme A transferase B856_04455 PF01144 Coenzyme A transferase B856_04460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04460 PF03466 LysR substrate binding domain B856_04470 PF02447 B856_04470 B856_04475 PF13561 Enoyl-(Acyl carrier protein) reductase B856_04480 PF00440 Bacterial regulatory proteins, tetR family B856_04485 PF09995 B856_04485 B856_04495 PF00593 TonB dependent receptor B856_04495 PF07715 TonB-dependent Receptor Plug Domain B856_04500 PF11162 B856_04500 B856_04505 PF01327 Polypeptide deformylase B856_04510 PF01476 LysM domain B856_04515 PF02481 DNA recombination-mediator protein A B856_04520 PF01300 Telomere recombination B856_04525 PF00892 EamA-like transporter family B856_04530 PF00440 Bacterial regulatory proteins, tetR family B856_04535 PF07690 Major Facilitator Superfamily B856_04540 PF12833 Helix-turn-helix domain B856_04545 PF00255 Glutathione peroxidase B856_04555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B856_04560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_04560 PF02874 ATP synthase alpha/beta family, beta-barrel domain B856_04565 PF00231 ATP synthase B856_04570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_04570 PF00306 ATP synthase alpha/beta chain, C terminal domain B856_04570 PF02874 ATP synthase alpha/beta family, beta-barrel domain B856_04575 PF00213 ATP synthase delta (OSCP) subunit B856_04580 PF00430 ATP synthase B/B' CF(0) B856_04585 PF00137 ATP synthase subunit C B856_04590 PF00119 ATP synthase A chain B856_04595 PF03899 B856_04595 B856_04600 PF01297 Periplasmic solute binding protein family B856_04605 PF01475 Ferric uptake regulator family B856_04610 PF00005 ABC transporter B856_04615 PF00950 B856_04615 B856_04620 PF01810 B856_04620 B856_04625 PF04261 Dyp-type peroxidase family B856_04635 PF00390 Malic enzyme, N-terminal domain B856_04635 PF03949 Malic enzyme, NAD binding domain B856_04640 PF00750 tRNA synthetases class I (R) B856_04640 PF03485 Arginyl tRNA synthetase N terminal domain B856_04640 PF05746 DALR anticodon binding domain B856_04645 PF05036 Sporulation related domain B856_04650 PF02798 Glutathione S-transferase, N-terminal domain B856_04650 PF14497 Glutathione S-transferase, C-terminal domain B856_04655 PF02566 OsmC-like protein B856_04660 PF02678 Pirin B856_04660 PF05726 Pirin C-terminal cupin domain B856_04665 PF12977 Domain of Unknown Function with PDB structure (DUF3861) B856_04670 PF03551 Transcriptional regulator PadR-like family B856_04675 PF01909 Nucleotidyltransferase domain B856_04675 PF13427 B856_04675 B856_04680 PF00117 Glutamine amidotransferase class-I B856_04680 PF00958 GMP synthase C terminal domain B856_04680 PF02540 NAD synthase B856_04685 PF04286 B856_04685 B856_04690 PF07681 B856_04690 B856_04695 PF09335 B856_04695 B856_04700 PF01810 B856_04700 B856_04710 PF13614 AAA domain B856_04715 PF04247 B856_04715 B856_04720 PF01722 BolA-like protein B856_04735 PF01648 4'-phosphopantetheinyl transferase superfamily B856_04740 PF01370 NAD dependent epimerase/dehydratase family B856_04740 PF12697 Alpha/beta hydrolase family B856_04750 PF03176 MMPL family B856_04750 PF10604 Polyketide cyclase / dehydrase and lipid transport B856_04750 PF17131 B856_04750 B856_04755 PF00501 AMP-binding enzyme B856_04755 PF00550 Phosphopantetheine attachment site B856_04755 PF00975 Thioesterase domain B856_04755 PF13193 AMP-binding enzyme C-terminal domain B856_04760 PF00668 Condensation domain B856_04765 PF00550 Phosphopantetheine attachment site B856_04770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_04770 PF02770 Acyl-CoA dehydrogenase, middle domain B856_04775 PF00501 AMP-binding enzyme B856_04780 PF00196 Bacterial regulatory proteins, luxR family B856_04780 PF03472 Autoinducer binding domain B856_04785 PF16245 B856_04785 B856_04790 PF00765 Autoinducer synthetase B856_04795 PF07690 Major Facilitator Superfamily B856_04800 PF16113 B856_04800 B856_04805 PF00378 Enoyl-CoA hydratase/isomerase family B856_04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_04810 PF02770 Acyl-CoA dehydrogenase, middle domain B856_04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_04815 PF00501 AMP-binding enzyme B856_04815 PF13193 AMP-binding enzyme C-terminal domain B856_04820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_04820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_04825 PF00171 Aldehyde dehydrogenase family B856_04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_04830 PF03466 LysR substrate binding domain B856_04835 PF00324 Amino acid permease B856_04840 PF00324 Amino acid permease B856_04845 PF01042 Endoribonuclease L-PSP B856_04850 PF00842 Alanine racemase, C-terminal domain B856_04850 PF01168 Alanine racemase, N-terminal domain B856_04855 PF01266 FAD dependent oxidoreductase B856_04860 PF01037 AsnC family B856_04860 PF13412 Winged helix-turn-helix DNA-binding B856_04865 PF07786 B856_04865 B856_04870 PF00593 TonB dependent receptor B856_04870 PF07715 TonB-dependent Receptor Plug Domain B856_04875 PF12680 SnoaL-like domain B856_04880 PF06877 Regulator of ribonuclease activity B B856_04885 PF00849 RNA pseudouridylate synthase B856_04890 PF06210 B856_04890 B856_04895 PF07690 Major Facilitator Superfamily B856_04900 PF00440 Bacterial regulatory proteins, tetR family B856_04900 PF16925 B856_04900 B856_04905 PF00106 short chain dehydrogenase B856_04910 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_04910 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_04915 PF00293 NUDIX domain B856_04920 PF00583 Acetyltransferase (GNAT) family B856_04925 PF13548 B856_04925 B856_04940 PF00330 Aconitase family (aconitate hydratase) B856_04940 PF00694 Aconitase C-terminal domain B856_04945 PF00285 Citrate synthase B856_04950 PF13714 Phosphoenolpyruvate phosphomutase B856_04955 PF00392 Bacterial regulatory proteins, gntR family B856_04955 PF07729 FCD domain B856_04960 PF00155 Aminotransferase class I and II B856_04965 PF01565 FAD binding domain B856_04965 PF09330 D-lactate dehydrogenase, membrane binding B856_04970 PF01070 FMN-dependent dehydrogenase B856_04975 PF00392 Bacterial regulatory proteins, gntR family B856_04975 PF07729 FCD domain B856_04980 PF02652 B856_04980 B856_04985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B856_04985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_04985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_04985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_04990 PF16363 B856_04990 B856_04995 PF00342 Phosphoglucose isomerase B856_05000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B856_05000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B856_05005 PF00483 Nucleotidyl transferase B856_05010 PF02397 B856_05010 B856_05015 PF00535 Glycosyl transferase family 2 B856_05020 PF00534 Glycosyl transferases group 1 B856_05020 PF13439 Glycosyltransferase Family 4 B856_05025 PF14897 B856_05025 B856_05030 PF13692 Glycosyl transferases group 1 B856_05040 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05045 PF13440 B856_05045 B856_05050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B856_05055 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B856_05060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B856_05065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B856_05065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B856_05065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B856_05070 PF02563 Polysaccharide biosynthesis/export protein B856_05075 PF01451 Low molecular weight phosphotyrosine protein phosphatase B856_05080 PF02706 Chain length determinant protein B856_05080 PF13614 AAA domain B856_05080 PF13807 B856_05080 B856_05085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B856_05090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B856_05095 PF03023 B856_05095 B856_05100 PF01510 N-acetylmuramoyl-L-alanine amidase B856_05105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain B856_05105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain B856_05115 PF04185 Phosphoesterase family B856_05115 PF05506 B856_05115 B856_05125 PF01138 3' exoribonuclease family, domain 1 B856_05125 PF03725 3' exoribonuclease family, domain 2 B856_05130 PF00487 B856_05130 B856_05135 PF00175 Oxidoreductase NAD-binding domain B856_05135 PF00970 Oxidoreductase FAD-binding domain B856_05140 PF00440 Bacterial regulatory proteins, tetR family B856_05145 PF00440 Bacterial regulatory proteins, tetR family B856_05150 PF01323 DSBA-like thioredoxin domain B856_05155 PF13489 Methyltransferase domain B856_05160 PF13419 Haloacid dehalogenase-like hydrolase B856_05165 PF00106 short chain dehydrogenase B856_05170 PF11776 Domain of unknown function (DUF3315) B856_05175 PF11776 Domain of unknown function (DUF3315) B856_05180 PF00583 Acetyltransferase (GNAT) family B856_05180 PF00696 Amino acid kinase family B856_05185 PF09084 NMT1/THI5 like B856_05190 PF13379 NMT1-like family B856_05195 PF00296 Luciferase-like monooxygenase B856_05200 PF00528 Binding-protein-dependent transport system inner membrane component B856_05205 PF00005 ABC transporter B856_05210 PF00440 Bacterial regulatory proteins, tetR family B856_05210 PF08362 YcdC-like protein, C-terminal region B856_05215 PF01048 Phosphorylase superfamily B856_05220 PF03595 Voltage-dependent anion channel B856_05225 PF01687 Riboflavin kinase B856_05225 PF06574 FAD synthetase B856_05230 PF00133 tRNA synthetases class I (I, L, M and V) B856_05230 PF06827 Zinc finger found in FPG and IleRS B856_05230 PF08264 Anticodon-binding domain of tRNA B856_05235 PF01252 B856_05235 B856_05240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_05245 PF03358 NADPH-dependent FMN reductase B856_05250 PF12796 Ankyrin repeats (3 copies) B856_05255 PF05621 B856_05255 B856_05260 PF06527 B856_05260 B856_05270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) B856_05285 PF03061 Thioesterase superfamily B856_05290 PF00132 Bacterial transferase hexapeptide (six repeats) B856_05295 PF07848 PaaX-like protein B856_05295 PF08223 PaaX-like protein C-terminal domain B856_05300 PF00501 AMP-binding enzyme B856_05300 PF14535 AMP-binding enzyme C-terminal domain B856_05305 PF00108 Thiolase, N-terminal domain B856_05305 PF02803 Thiolase, C-terminal domain B856_05310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_05310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_05315 PF00378 Enoyl-CoA hydratase/isomerase family B856_05320 PF00378 Enoyl-CoA hydratase/isomerase family B856_05325 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_05325 PF00175 Oxidoreductase NAD-binding domain B856_05325 PF00970 Oxidoreductase FAD-binding domain B856_05330 PF01883 Domain of unknown function DUF59 B856_05335 PF05138 Phenylacetic acid catabolic protein B856_05340 PF06243 Phenylacetic acid degradation B B856_05345 PF05138 Phenylacetic acid catabolic protein B856_05350 PF00171 Aldehyde dehydrogenase family B856_05350 PF01575 MaoC like domain B856_05355 PF03313 B856_05355 B856_05355 PF03315 Serine dehydratase beta chain B856_05360 PF13520 Amino acid permease B856_05365 PF00171 Aldehyde dehydrogenase family B856_05370 PF00083 Sugar (and other) transporter B856_05375 PF08448 PAS fold B856_05375 PF12833 Helix-turn-helix domain B856_05380 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_05385 PF13510 2Fe-2S iron-sulfur cluster binding domain B856_05390 PF01266 FAD dependent oxidoreductase B856_05395 PF05544 Proline racemase B856_05400 PF00392 Bacterial regulatory proteins, gntR family B856_05400 PF07729 FCD domain B856_05405 PF00892 EamA-like transporter family B856_05410 PF00701 Dihydrodipicolinate synthetase family B856_05420 PF03891 B856_05420 B856_05420 PF11720 Peptidase inhibitor I78 family B856_05425 PF00376 MerR family regulatory protein B856_05425 PF09278 MerR, DNA binding B856_05440 PF07690 Major Facilitator Superfamily B856_05445 PF00920 Dehydratase family B856_05450 PF00392 Bacterial regulatory proteins, gntR family B856_05450 PF07729 FCD domain B856_05455 PF09694 B856_05455 B856_05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05460 PF03466 LysR substrate binding domain B856_05465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B856_05465 PF13378 Enolase C-terminal domain-like B856_05470 PF02426 Muconolactone delta-isomerase B856_05475 PF00775 Dioxygenase B856_05475 PF04444 Catechol dioxygenase N terminus B856_05480 PF01144 Coenzyme A transferase B856_05485 PF01144 Coenzyme A transferase B856_05490 PF00108 Thiolase, N-terminal domain B856_05490 PF02803 Thiolase, C-terminal domain B856_05495 PF00561 alpha/beta hydrolase fold B856_05500 PF01804 Penicillin amidase B856_05505 PF00171 Aldehyde dehydrogenase family B856_05515 PF01179 Copper amine oxidase, enzyme domain B856_05515 PF02727 Copper amine oxidase, N2 domain B856_05515 PF02728 Copper amine oxidase, N3 domain B856_05515 PF07833 Copper amine oxidase N-terminal domain B856_05520 PF12833 Helix-turn-helix domain B856_05520 PF14525 B856_05520 B856_05525 PF01613 Flavin reductase like domain B856_05530 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_05530 PF00175 Oxidoreductase NAD-binding domain B856_05530 PF00970 Oxidoreductase FAD-binding domain B856_05535 PF13561 Enoyl-(Acyl carrier protein) reductase B856_05540 PF00866 Ring hydroxylating beta subunit B856_05545 PF00355 Rieske [2Fe-2S] domain B856_05545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_05550 PF13577 SnoaL-like domain B856_05560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_05560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_05565 PF01425 Amidase B856_05570 PF01047 MarR family B856_05580 PF07690 Major Facilitator Superfamily B856_05585 PF03573 outer membrane porin, OprD family B856_05590 PF00106 short chain dehydrogenase B856_05595 PF00300 Histidine phosphatase superfamily (branch 1) B856_05600 PF01636 Phosphotransferase enzyme family B856_05605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_05605 PF02770 Acyl-CoA dehydrogenase, middle domain B856_05605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05610 PF03466 LysR substrate binding domain B856_05615 PF01614 Bacterial transcriptional regulator B856_05615 PF09339 IclR helix-turn-helix domain B856_05620 PF00753 Metallo-beta-lactamase superfamily B856_05625 PF04143 B856_05625 B856_05630 PF04143 B856_05630 B856_05640 PF01011 PQQ enzyme repeat B856_05645 PF04966 Carbohydrate-selective porin, OprB family B856_05650 PF13229 Right handed beta helix region B856_05655 PF01487 Type I 3-dehydroquinase B856_05660 PF00775 Dioxygenase B856_05665 PF00775 Dioxygenase B856_05665 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal B856_05670 PF02627 Carboxymuconolactone decarboxylase family B856_05675 PF07690 Major Facilitator Superfamily B856_05680 PF00561 alpha/beta hydrolase fold B856_05685 PF00206 Lyase B856_05685 PF10397 Adenylosuccinate lyase C-terminus B856_05690 PF00108 Thiolase, N-terminal domain B856_05690 PF02803 Thiolase, C-terminal domain B856_05695 PF01144 Coenzyme A transferase B856_05700 PF01144 Coenzyme A transferase B856_05705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B856_05710 PF04977 Septum formation initiator B856_05715 PF04239 Protein of unknown function (DUF421) B856_05720 PF00113 Enolase, C-terminal TIM barrel domain B856_05720 PF03952 Enolase, N-terminal domain B856_05725 PF00793 DAHP synthetase I family B856_05730 PF00117 Glutamine amidotransferase class-I B856_05730 PF06418 CTP synthase N-terminus B856_05740 PF10118 B856_05740 B856_05745 PF12146 Putative lysophospholipase B856_05750 PF13472 GDSL-like Lipase/Acylhydrolase family B856_05755 PF12680 SnoaL-like domain B856_05760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_05765 PF03551 Transcriptional regulator PadR-like family B856_05765 PF10400 Virulence activator alpha C-term B856_05770 PF12697 Alpha/beta hydrolase family B856_05775 PF00793 DAHP synthetase I family B856_05780 PF02694 B856_05780 B856_05785 PF00004 ATPase family associated with various cellular activities (AAA) B856_05785 PF02861 Clp amino terminal domain B856_05785 PF07724 AAA domain (Cdc48 subfamily) B856_05785 PF10431 C-terminal, D2-small domain, of ClpB protein B856_05790 PF02617 ATP-dependent Clp protease adaptor protein ClpS B856_05800 PF01118 Semialdehyde dehydrogenase, NAD binding domain B856_05800 PF02774 Semialdehyde dehydrogenase, dimerisation domain B856_05810 PF01863 Protein of unknown function DUF45 B856_05815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) B856_05820 PF00291 Pyridoxal-phosphate dependent enzyme B856_05820 PF00585 C-terminal regulatory domain of Threonine dehydratase B856_05825 PF02254 TrkA-N domain B856_05830 PF02386 Cation transport protein B856_05835 PF02253 Phospholipase A1 B856_05840 PF00675 Insulinase (Peptidase family M16) B856_05840 PF05193 Peptidase M16 inactive domain B856_05840 PF08367 Peptidase M16C associated B856_05845 PF00593 TonB dependent receptor B856_05845 PF07715 TonB-dependent Receptor Plug Domain B856_05850 PF00294 pfkB family carbohydrate kinase B856_05855 PF00355 Rieske [2Fe-2S] domain B856_05860 PF07290 B856_05860 B856_05870 PF01654 B856_05870 B856_05875 PF02322 B856_05875 B856_05885 PF09600 B856_05885 B856_05890 PF00583 Acetyltransferase (GNAT) family B856_05895 PF09829 B856_05895 B856_05900 PF00881 Nitroreductase family B856_05905 PF00448 SRP54-type protein, GTPase domain B856_05905 PF02881 SRP54-type protein, helical bundle domain B856_05930 PF11042 B856_05930 B856_05935 PF00571 CBS domain B856_05940 PF00202 Aminotransferase class-III B856_05945 PF00462 Glutaredoxin B856_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_05955 PF03466 LysR substrate binding domain B856_05960 PF00557 Metallopeptidase family M24 B856_05965 PF05525 B856_05965 B856_05970 PF03928 Domain of unknown function (DUF336) B856_05985 PF12146 Putative lysophospholipase B856_05990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B856_05990 PF00381 PTS HPr component phosphorylation site B856_05990 PF00391 PEP-utilising enzyme, mobile domain B856_05990 PF02896 PEP-utilising enzyme, TIM barrel domain B856_05990 PF05524 PEP-utilising enzyme, N-terminal B856_05995 PF00294 pfkB family carbohydrate kinase B856_06000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B856_06000 PF02378 Phosphotransferase system, EIIC B856_06015 PF01047 MarR family B856_06025 PF00563 EAL domain B856_06025 PF00990 GGDEF domain B856_06025 PF08447 PAS fold B856_06025 PF08448 PAS fold B856_06030 PF00582 Universal stress protein family B856_06035 PF07995 Glucose / Sorbosone dehydrogenase B856_06040 PF02586 Uncharacterised ACR, COG2135 B856_06045 PF00916 B856_06045 B856_06045 PF01740 STAS domain B856_06050 PF00082 Subtilase family B856_06050 PF05922 Peptidase inhibitor I9 B856_06055 PF07859 alpha/beta hydrolase fold B856_06060 PF00324 Amino acid permease B856_06065 PF00266 Aminotransferase class-V B856_06070 PF01037 AsnC family B856_06070 PF13412 Winged helix-turn-helix DNA-binding B856_06075 PF13302 Acetyltransferase (GNAT) domain B856_06090 PF05666 B856_06090 B856_06095 PF13419 Haloacid dehalogenase-like hydrolase B856_06100 PF01479 S4 domain B856_06105 PF00154 recA bacterial DNA recombination protein B856_06110 PF02631 RecX family B856_06115 PF13174 Tetratricopeptide repeat B856_06115 PF16331 B856_06115 B856_06120 PF00132 Bacterial transferase hexapeptide (six repeats) B856_06120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B856_06125 PF07977 FabA-like domain B856_06130 PF00132 Bacterial transferase hexapeptide (six repeats) B856_06130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B856_06130 PF14602 Hexapeptide repeat of succinyl-transferase B856_06135 PF03938 Outer membrane protein (OmpH-like) B856_06140 PF01103 Surface antigen B856_06140 PF07244 Surface antigen variable number repeat B856_06145 PF02163 Peptidase family M50 B856_06145 PF13180 PDZ domain B856_06150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase B856_06150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal B856_06150 PF13288 DXP reductoisomerase C-terminal domain B856_06155 PF01148 Cytidylyltransferase family B856_06160 PF01255 Putative undecaprenyl diphosphate synthase B856_06165 PF01765 Ribosome recycling factor B856_06170 PF00696 Amino acid kinase family B856_06175 PF00919 Uncharacterized protein family UPF0004 B856_06175 PF04055 Radical SAM superfamily B856_06180 PF00512 His Kinase A (phospho-acceptor) domain B856_06180 PF00989 PAS fold B856_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_06185 PF00072 Response regulator receiver domain B856_06185 PF00158 Sigma-54 interaction domain B856_06185 PF02954 Bacterial regulatory protein, Fis family B856_06190 PF00440 Bacterial regulatory proteins, tetR family B856_06195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B856_06195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B856_06205 PF02542 YgbB family B856_06215 PF01266 FAD dependent oxidoreductase B856_06235 PF00206 Lyase B856_06235 PF10415 Fumarase C C-terminus B856_06240 PF01370 NAD dependent epimerase/dehydratase family B856_06245 PF02635 DsrE/DsrF-like family B856_06260 PF04358 DsrC like protein B856_06265 PF00892 EamA-like transporter family B856_06270 PF00155 Aminotransferase class I and II B856_06270 PF00392 Bacterial regulatory proteins, gntR family B856_06275 PF01638 HxlR-like helix-turn-helix B856_06280 PF00994 Probable molybdopterin binding domain B856_06280 PF03453 MoeA N-terminal region (domain I and II) B856_06280 PF03454 MoeA C-terminal region (domain IV) B856_06285 PF00994 Probable molybdopterin binding domain B856_06285 PF01967 MoaC family B856_06290 PF02391 MoaE protein B856_06295 PF02597 ThiS family B856_06300 PF04055 Radical SAM superfamily B856_06300 PF06463 Molybdenum Cofactor Synthesis C B856_06300 PF13353 4Fe-4S single cluster domain B856_06305 PF00384 Molybdopterin oxidoreductase B856_06305 PF01568 Molydopterin dinucleotide binding domain B856_06305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_06310 PF12804 MobA-like NTP transferase domain B856_06315 PF00384 Molybdopterin oxidoreductase B856_06315 PF01568 Molydopterin dinucleotide binding domain B856_06315 PF04324 BFD-like [2Fe-2S] binding domain B856_06315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06320 PF13806 Rieske-like [2Fe-2S] domain B856_06325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B856_06325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B856_06325 PF04324 BFD-like [2Fe-2S] binding domain B856_06325 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06335 PF00072 Response regulator receiver domain B856_06335 PF03861 ANTAR domain B856_06340 PF13379 NMT1-like family B856_06345 PF00817 impB/mucB/samB family B856_06345 PF11799 impB/mucB/samB family C-terminal domain B856_06345 PF13438 B856_06345 B856_06350 PF01220 Dehydroquinase class II B856_06355 PF00364 Biotin-requiring enzyme B856_06360 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B856_06360 PF02785 Biotin carboxylase C-terminal domain B856_06360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_06370 PF12832 MFS_1 like family B856_06375 PF01527 Transposase B856_06380 PF00665 Integrase core domain B856_06405 PF05838 Glycosyl hydrolase 108 B856_06405 PF09374 Predicted Peptidoglycan domain B856_06425 PF00218 Indole-3-glycerol phosphate synthase B856_06430 PF00591 Glycosyl transferase family, a/b domain B856_06430 PF02885 Glycosyl transferase family, helical bundle domain B856_06435 PF00593 TonB dependent receptor B856_06435 PF07715 TonB-dependent Receptor Plug Domain B856_06440 PF01433 Peptidase family M1 B856_06440 PF11838 ERAP1-like C-terminal domain B856_06445 PF00117 Glutamine amidotransferase class-I B856_06450 PF00557 Metallopeptidase family M24 B856_06450 PF01321 Creatinase/Prolidase N-terminal domain B856_06450 PF16188 B856_06450 B856_06450 PF16189 B856_06450 B856_06455 PF00854 POT family B856_06460 PF00120 Glutamine synthetase, catalytic domain B856_06460 PF03951 Glutamine synthetase, beta-Grasp domain B856_06465 PF04345 Chorismate lyase B856_06470 PF01040 UbiA prenyltransferase family B856_06475 PF03583 Secretory lipase B856_06485 PF10881 B856_06485 B856_06505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B856_06505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B856_06510 PF01784 NIF3 (NGG1p interacting factor 3) B856_06515 PF13180 PDZ domain B856_06515 PF13365 Trypsin-like peptidase domain B856_06520 PF01743 Poly A polymerase head domain B856_06520 PF12627 Probable RNA and SrmB- binding site of polymerase A B856_06525 PF00390 Malic enzyme, N-terminal domain B856_06525 PF01515 Phosphate acetyl/butaryl transferase B856_06525 PF03949 Malic enzyme, NAD binding domain B856_06530 PF00563 EAL domain B856_06530 PF00989 PAS fold B856_06530 PF00990 GGDEF domain B856_06530 PF08447 PAS fold B856_06535 PF04452 RNA methyltransferase B856_06540 PF02219 Methylenetetrahydrofolate reductase B856_06545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B856_06545 PF05221 S-adenosyl-L-homocysteine hydrolase B856_06550 PF03412 Peptidase C39 family B856_06555 PF02627 Carboxymuconolactone decarboxylase family B856_06560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_06560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_06560 PF09317 B856_06560 B856_06565 PF04055 Radical SAM superfamily B856_06565 PF16881 B856_06565 B856_06570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_06580 PF07690 Major Facilitator Superfamily B856_06585 PF07690 Major Facilitator Superfamily B856_06590 PF03922 OmpW family B856_06595 PF00557 Metallopeptidase family M24 B856_06600 PF00318 Ribosomal protein S2 B856_06605 PF00889 Elongation factor TS B856_06610 PF11948 B856_06610 B856_06615 PF02311 AraC-like ligand binding domain B856_06615 PF12833 Helix-turn-helix domain B856_06620 PF03591 B856_06620 B856_06625 PF05437 B856_06625 B856_06630 PF06127 B856_06630 B856_06635 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel B856_06640 PF13406 Transglycosylase SLT domain B856_06645 PF01098 B856_06645 B856_06655 PF14489 QueF-like protein B856_06655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term B856_06660 PF01061 B856_06660 B856_06665 PF00005 ABC transporter B856_06680 PF12843 B856_06680 B856_06685 PF03583 Secretory lipase B856_06690 PF05117 B856_06690 B856_06690 PF06877 Regulator of ribonuclease activity B B856_06695 PF00464 Serine hydroxymethyltransferase B856_06700 PF02321 Outer membrane efflux protein B856_06705 PF00873 AcrB/AcrD/AcrF family B856_06710 PF16576 B856_06710 B856_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_06715 PF03466 LysR substrate binding domain B856_06720 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_06725 PF00528 Binding-protein-dependent transport system inner membrane component B856_06730 PF00528 Binding-protein-dependent transport system inner membrane component B856_06735 PF00005 ABC transporter B856_06740 PF00893 Small Multidrug Resistance protein B856_06750 PF01136 B856_06750 B856_06750 PF16325 B856_06750 B856_06755 PF00155 Aminotransferase class I and II B856_06755 PF00392 Bacterial regulatory proteins, gntR family B856_06760 PF02567 Phenazine biosynthesis-like protein B856_06765 PF00175 Oxidoreductase NAD-binding domain B856_06765 PF00970 Oxidoreductase FAD-binding domain B856_06770 PF01980 Uncharacterised protein family UPF0066 B856_06775 PF02308 B856_06775 B856_06775 PF13194 B856_06775 B856_06780 PF00437 Type II/IV secretion system protein B856_06780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B856_06785 PF04076 Bacterial OB fold (BOF) protein B856_06790 PF00072 Response regulator receiver domain B856_06790 PF00486 Transcriptional regulatory protein, C terminal B856_06795 PF00512 His Kinase A (phospho-acceptor) domain B856_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_06800 PF10636 Hemin uptake protein hemP B856_06805 PF00293 NUDIX domain B856_06805 PF02581 Thiamine monophosphate synthase/TENI B856_06815 PF00905 Penicillin binding protein transpeptidase domain B856_06815 PF00912 Transglycosylase B856_06815 PF14814 Bifunctional transglycosylase second domain B856_06820 PF01513 ATP-NAD kinase B856_06825 PF07023 B856_06825 B856_06830 PF00591 Glycosyl transferase family, a/b domain B856_06830 PF02885 Glycosyl transferase family, helical bundle domain B856_06835 PF00375 Sodium:dicarboxylate symporter family B856_06840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_06840 PF02770 Acyl-CoA dehydrogenase, middle domain B856_06840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_06845 PF00756 Putative esterase B856_06850 PF00800 Prephenate dehydratase B856_06850 PF01817 Chorismate mutase type II B856_06850 PF01842 ACT domain B856_06855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B856_06855 PF02153 Prephenate dehydrogenase B856_06865 PF01546 Peptidase family M20/M25/M40 B856_06865 PF07687 Peptidase dimerisation domain B856_06870 PF00753 Metallo-beta-lactamase superfamily B856_06880 PF03883 B856_06880 B856_06890 PF05690 Thiazole biosynthesis protein ThiG B856_06895 PF02597 ThiS family B856_06900 PF04241 B856_06900 B856_06905 PF00140 Sigma-70 factor, region 1 B856_06905 PF04542 Sigma-70 region 2 B856_06905 PF04545 Sigma-70, region 4 B856_06910 PF01206 Sulfurtransferase TusA B856_06915 PF00313 'Cold-shock' DNA-binding domain B856_06920 PF00270 DEAD/DEAH box helicase B856_06920 PF00271 Helicase conserved C-terminal domain B856_06930 PF00881 Nitroreductase family B856_06935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B856_06935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B856_06940 PF00300 Histidine phosphatase superfamily (branch 1) B856_06945 PF05134 Type II secretion system (T2SS), protein L B856_06945 PF12693 GspL periplasmic domain B856_06950 PF04612 Type II secretion system (T2SS), protein M B856_06955 PF01180 Dihydroorotate dehydrogenase B856_06960 PF02674 B856_06960 B856_06965 PF00156 Phosphoribosyl transferase domain B856_06965 PF13522 Glutamine amidotransferase domain B856_06970 PF01435 Peptidase family M48 B856_06980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_06980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_06985 PF01435 Peptidase family M48 B856_06990 PF09424 Yqey-like protein B856_06995 PF01165 Ribosomal protein S21 B856_07000 PF00814 Glycoprotease family B856_07010 PF05673 Protein of unknown function (DUF815) B856_07015 PF01734 Patatin-like phospholipase B856_07015 PF11815 B856_07015 B856_07020 PF00069 Protein kinase domain B856_07050 PF01011 PQQ enzyme repeat B856_07050 PF13360 PQQ-like domain B856_07075 PF06527 B856_07075 B856_07080 PF05621 B856_07080 B856_07085 PF00665 Integrase core domain B856_07085 PF09299 Mu transposase, C-terminal B856_07090 PF08722 TnsA endonuclease N terminal B856_07100 PF13182 B856_07100 B856_07110 PF01507 Phosphoadenosine phosphosulfate reductase family B856_07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07120 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07130 PF00268 Ribonucleotide reductase, small chain B856_07140 PF00317 Ribonucleotide reductase, all-alpha domain B856_07140 PF02867 Ribonucleotide reductase, barrel domain B856_07140 PF03477 ATP cone domain B856_07150 PF00072 Response regulator receiver domain B856_07150 PF00486 Transcriptional regulatory protein, C terminal B856_07155 PF00512 His Kinase A (phospho-acceptor) domain B856_07155 PF00672 HAMP domain B856_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07165 PF00990 GGDEF domain B856_07170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 B856_07175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B856_07180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit B856_07180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit B856_07185 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin B856_07190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit B856_07190 PF10531 SLBB domain B856_07190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B856_07195 PF00384 Molybdopterin oxidoreductase B856_07195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B856_07195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B856_07195 PF13510 2Fe-2S iron-sulfur cluster binding domain B856_07200 PF00146 NADH dehydrogenase B856_07205 PF12838 4Fe-4S dicluster domain B856_07210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 B856_07215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B856_07220 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B856_07220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B856_07225 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B856_07230 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B856_07235 PF14681 Uracil phosphoribosyltransferase B856_07240 PF00313 'Cold-shock' DNA-binding domain B856_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_07245 PF03466 LysR substrate binding domain B856_07250 PF00175 Oxidoreductase NAD-binding domain B856_07250 PF00970 Oxidoreductase FAD-binding domain B856_07265 PF05552 Conserved TM helix B856_07275 PF03486 HI0933-like protein B856_07280 PF00291 Pyridoxal-phosphate dependent enzyme B856_07285 PF13437 HlyD family secretion protein B856_07285 PF13533 Biotin-lipoyl like B856_07290 PF07690 Major Facilitator Superfamily B856_07295 PF00440 Bacterial regulatory proteins, tetR family B856_07300 PF01810 B856_07300 B856_07310 PF01588 Putative tRNA binding domain B856_07310 PF08264 Anticodon-binding domain of tRNA B856_07310 PF09334 tRNA synthetases class I (M) B856_07320 PF10609 ParA/MinD ATPase like B856_07325 PF01048 Phosphorylase superfamily B856_07330 PF09835 B856_07330 B856_07335 PF01810 B856_07335 B856_07340 PF00692 dUTPase B856_07370 PF01207 Dihydrouridine synthase (Dus) B856_07375 PF01578 B856_07375 B856_07380 PF00448 SRP54-type protein, GTPase domain B856_07380 PF02881 SRP54-type protein, helical bundle domain B856_07380 PF02978 Signal peptide binding domain B856_07385 PF03309 Type III pantothenate kinase B856_07390 PF03099 Biotin/lipoate A/B protein ligase family B856_07395 PF01925 B856_07395 B856_07400 PF00392 Bacterial regulatory proteins, gntR family B856_07400 PF07729 FCD domain B856_07405 PF02463 RecF/RecN/SMC N terminal domain B856_07410 PF04354 ZipA, C-terminal FtsZ-binding domain B856_07415 PF00533 BRCA1 C Terminus (BRCT) domain B856_07415 PF01653 NAD-dependent DNA ligase adenylation domain B856_07415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain B856_07415 PF03120 NAD-dependent DNA ligase OB-fold domain B856_07415 PF12826 Helix-hairpin-helix motif B856_07415 PF14520 Helix-hairpin-helix domain B856_07420 PF00210 Ferritin-like domain B856_07425 PF07690 Major Facilitator Superfamily B856_07430 PF00982 Glycosyltransferase family 20 B856_07435 PF02358 Trehalose-phosphatase B856_07445 PF00202 Aminotransferase class-III B856_07450 PF00155 Aminotransferase class I and II B856_07455 PF13489 Methyltransferase domain B856_07460 PF13500 AAA domain B856_07465 PF00849 RNA pseudouridylate synthase B856_07465 PF01479 S4 domain B856_07470 PF04079 Putative transcriptional regulators (Ypuh-like) B856_07475 PF02616 ScpA/B protein B856_07480 PF01300 Telomere recombination B856_07485 PF04315 B856_07485 B856_07490 PF02620 B856_07490 B856_07495 PF01783 Ribosomal L32p protein family B856_07500 PF00698 Acyl transferase domain B856_07505 PF13561 Enoyl-(Acyl carrier protein) reductase B856_07510 PF00550 Phosphopantetheine attachment site B856_07515 PF01476 LysM domain B856_07515 PF04972 BON domain B856_07520 PF08543 Phosphomethylpyrimidine kinase B856_07525 PF13419 Haloacid dehalogenase-like hydrolase B856_07530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B856_07535 PF09925 B856_07535 B856_07535 PF14351 B856_07535 B856_07540 PF14345 B856_07540 B856_07545 PF02261 Aspartate decarboxylase B856_07550 PF01195 Peptidyl-tRNA hydrolase B856_07555 PF01386 Ribosomal L25p family B856_07560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B856_07560 PF14572 Phosphoribosyl synthetase-associated domain B856_07565 PF00920 Dehydratase family B856_07570 PF01557 Fumarylacetoacetate (FAA) hydrolase family B856_07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_07575 PF03466 LysR substrate binding domain B856_07580 PF01370 NAD dependent epimerase/dehydratase family B856_07585 PF07690 Major Facilitator Superfamily B856_07590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_07590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_07595 PF06719 B856_07595 B856_07595 PF12833 Helix-turn-helix domain B856_07600 PF07883 Cupin domain B856_07605 PF02627 Carboxymuconolactone decarboxylase family B856_07610 PF00107 Zinc-binding dehydrogenase B856_07610 PF08240 Alcohol dehydrogenase GroES-like domain B856_07615 PF01497 Periplasmic binding protein B856_07620 PF01032 FecCD transport family B856_07625 PF00005 ABC transporter B856_07630 PF00583 Acetyltransferase (GNAT) family B856_07635 PF02311 AraC-like ligand binding domain B856_07635 PF12833 Helix-turn-helix domain B856_07640 PF01925 B856_07640 B856_07645 PF00156 Phosphoribosyl transferase domain B856_07650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B856_07655 PF00293 NUDIX domain B856_07660 PF02219 Methylenetetrahydrofolate reductase B856_07660 PF12225 B856_07660 B856_07725 PF00196 Bacterial regulatory proteins, luxR family B856_07730 PF01425 Amidase B856_07735 PF13437 HlyD family secretion protein B856_07735 PF13533 Biotin-lipoyl like B856_07740 PF07690 Major Facilitator Superfamily B856_07750 PF03321 GH3 auxin-responsive promoter B856_07755 PF02321 Outer membrane efflux protein B856_07765 PF01975 Survival protein SurE B856_07775 PF13328 HD domain B856_07780 PF01381 Helix-turn-helix B856_07785 PF00440 Bacterial regulatory proteins, tetR family B856_07795 PF03374 B856_07795 B856_07810 PF05488 PAAR motif B856_07820 PF00106 short chain dehydrogenase B856_07825 PF00106 short chain dehydrogenase B856_07830 PF12146 Putative lysophospholipase B856_07835 PF12625 B856_07835 B856_07835 PF12833 Helix-turn-helix domain B856_07845 PF00512 His Kinase A (phospho-acceptor) domain B856_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_07850 PF00072 Response regulator receiver domain B856_07850 PF00486 Transcriptional regulatory protein, C terminal B856_07855 PF16576 B856_07855 B856_07860 PF00873 AcrB/AcrD/AcrF family B856_07865 PF02321 Outer membrane efflux protein B856_07870 PF12146 Putative lysophospholipase B856_07875 PF13738 Pyridine nucleotide-disulphide oxidoreductase B856_07880 PF01593 Flavin containing amine oxidoreductase B856_07885 PF03435 Saccharopine dehydrogenase B856_07890 PF00440 Bacterial regulatory proteins, tetR family B856_07895 PF01266 FAD dependent oxidoreductase B856_07915 PF16970 B856_07915 B856_07920 PF01609 Transposase DDE domain B856_07925 PF01609 Transposase DDE domain B856_07930 PF00440 Bacterial regulatory proteins, tetR family B856_07940 PF00199 Catalase B856_07945 PF01292 Prokaryotic cytochrome b561 B856_07950 PF07045 Protein of unknown function (DUF1330) B856_07955 PF00392 Bacterial regulatory proteins, gntR family B856_07955 PF07729 FCD domain B856_07960 PF06684 Amino acid synthesis B856_07965 PF12697 Alpha/beta hydrolase family B856_07970 PF01613 Flavin reductase like domain B856_07975 PF00296 Luciferase-like monooxygenase B856_07980 PF00171 Aldehyde dehydrogenase family B856_07990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_08000 PF00171 Aldehyde dehydrogenase family B856_08005 PF02627 Carboxymuconolactone decarboxylase family B856_08010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08010 PF03466 LysR substrate binding domain B856_08015 PF02525 Flavodoxin-like fold B856_08020 PF01614 Bacterial transcriptional regulator B856_08020 PF09339 IclR helix-turn-helix domain B856_08025 PF01494 FAD binding domain B856_08030 PF00392 Bacterial regulatory proteins, gntR family B856_08030 PF07702 UTRA domain B856_08035 PF13343 Bacterial extracellular solute-binding protein B856_08040 PF00005 ABC transporter B856_08045 PF00528 Binding-protein-dependent transport system inner membrane component B856_08050 PF01266 FAD dependent oxidoreductase B856_08055 PF00266 Aminotransferase class-V B856_08060 PF13419 Haloacid dehalogenase-like hydrolase B856_08065 PF07690 Major Facilitator Superfamily B856_08070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08070 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08075 PF02515 CoA-transferase family III B856_08085 PF01614 Bacterial transcriptional regulator B856_08085 PF09339 IclR helix-turn-helix domain B856_08090 PF00378 Enoyl-CoA hydratase/isomerase family B856_08095 PF03060 Nitronate monooxygenase B856_08100 PF07690 Major Facilitator Superfamily B856_08105 PF01614 Bacterial transcriptional regulator B856_08105 PF09339 IclR helix-turn-helix domain B856_08110 PF00108 Thiolase, N-terminal domain B856_08110 PF02803 Thiolase, C-terminal domain B856_08115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_08115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_08120 PF13561 Enoyl-(Acyl carrier protein) reductase B856_08125 PF00378 Enoyl-CoA hydratase/isomerase family B856_08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08130 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08135 PF07690 Major Facilitator Superfamily B856_08140 PF01144 Coenzyme A transferase B856_08145 PF01144 Coenzyme A transferase B856_08155 PF07690 Major Facilitator Superfamily B856_08160 PF03061 Thioesterase superfamily B856_08165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08165 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08165 PF12418 B856_08165 B856_08165 PF12806 B856_08165 B856_08170 PF13622 Thioesterase-like superfamily B856_08175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase B856_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08180 PF03466 LysR substrate binding domain B856_08185 PF00682 HMGL-like B856_08190 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B856_08190 PF00364 Biotin-requiring enzyme B856_08190 PF02785 Biotin carboxylase C-terminal domain B856_08190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_08195 PF00378 Enoyl-CoA hydratase/isomerase family B856_08200 PF01039 Carboxyl transferase domain B856_08205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_08205 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08210 PF00440 Bacterial regulatory proteins, tetR family B856_08215 PF00501 AMP-binding enzyme B856_08215 PF13193 AMP-binding enzyme C-terminal domain B856_08220 PF13649 Methyltransferase domain B856_08230 PF13472 GDSL-like Lipase/Acylhydrolase family B856_08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08235 PF03466 LysR substrate binding domain B856_08270 PF02464 Competence-damaged protein B856_08275 PF14518 Iron-containing redox enzyme B856_08280 PF00199 Catalase B856_08280 PF06628 Catalase-related immune-responsive B856_08285 PF13561 Enoyl-(Acyl carrier protein) reductase B856_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_08300 PF03466 LysR substrate binding domain B856_08305 PF13561 Enoyl-(Acyl carrier protein) reductase B856_08310 PF04055 Radical SAM superfamily B856_08310 PF06969 HemN C-terminal domain B856_08315 PF04657 B856_08315 B856_08320 PF01554 MatE B856_08325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_08330 PF02770 Acyl-CoA dehydrogenase, middle domain B856_08330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_08330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_08335 PF03109 B856_08335 B856_08340 PF01197 Ribosomal protein L31 B856_08345 PF08888 HopJ type III effector protein B856_08350 PF02537 B856_08350 B856_08355 PF04828 Glutathione-dependent formaldehyde-activating enzyme B856_08360 PF03486 HI0933-like protein B856_08365 PF02390 Putative methyltransferase B856_08370 PF03884 Domain of unknown function (DUF329) B856_08375 PF00753 Metallo-beta-lactamase superfamily B856_08380 PF00762 Ferrochelatase B856_08385 PF13271 B856_08385 B856_08390 PF01177 Asp/Glu/Hydantoin racemase B856_08395 PF06938 Protein of unknown function (DUF1285) B856_08400 PF01946 Thi4 family B856_08400 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase B856_08405 PF01206 Sulfurtransferase TusA B856_08410 PF00571 CBS domain B856_08410 PF03471 Transporter associated domain B856_08415 PF00795 Carbon-nitrogen hydrolase B856_08420 PF01588 Putative tRNA binding domain B856_08430 PF07963 Prokaryotic N-terminal methylation motif B856_08430 PF08334 Type II secretion system (T2SS), protein G B856_08435 PF00482 Type II secretion system (T2SS), protein F B856_08440 PF00271 Helicase conserved C-terminal domain B856_08440 PF04851 Type III restriction enzyme, res subunit B856_08445 PF00999 Sodium/hydrogen exchanger family B856_08445 PF02254 TrkA-N domain B856_08450 PF01430 Hsp33 protein B856_08455 PF01810 B856_08455 B856_08460 PF00226 DnaJ domain B856_08460 PF01556 DnaJ C terminal domain B856_08465 PF13591 MerR HTH family regulatory protein B856_08470 PF01544 CorA-like Mg2+ transporter protein B856_08475 PF00013 KH domain B856_08475 PF00575 S1 RNA binding domain B856_08475 PF01138 3' exoribonuclease family, domain 1 B856_08475 PF03725 3' exoribonuclease family, domain 2 B856_08475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B856_08480 PF00312 Ribosomal protein S15 B856_08485 PF00144 Beta-lactamase B856_08490 PF13538 UvrD-like helicase C-terminal domain B856_08490 PF13604 AAA domain B856_08495 PF00580 UvrD/REP helicase N-terminal domain B856_08495 PF12705 PD-(D/E)XK nuclease superfamily B856_08495 PF13361 UvrD-like helicase C-terminal domain B856_08500 PF04257 Exodeoxyribonuclease V, gamma subunit B856_08510 PF03976 Polyphosphate kinase 2 (PPK2) B856_08520 PF01209 ubiE/COQ5 methyltransferase family B856_08530 PF03109 B856_08530 B856_08535 PF01494 FAD binding domain B856_08540 PF01502 Phosphoribosyl-AMP cyclohydrolase B856_08540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase B856_08545 PF13245 Part of AAA domain B856_08545 PF13361 UvrD-like helicase C-terminal domain B856_08550 PF13476 AAA domain B856_08555 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B856_08555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B856_08555 PF04039 B856_08555 B856_08555 PF13244 B856_08555 B856_08560 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B856_08565 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B856_08570 PF01899 B856_08570 B856_08575 PF04066 B856_08575 B856_08580 PF03334 B856_08580 B856_08585 PF02033 Ribosome-binding factor A B856_08590 PF00009 Elongation factor Tu GTP binding domain B856_08590 PF04760 Translation initiation factor IF-2, N-terminal region B856_08590 PF08364 B856_08590 B856_08590 PF11987 Translation-initiation factor 2 B856_08595 PF08529 NusA N-terminal domain B856_08595 PF13184 NusA-like KH domain B856_08595 PF14520 Helix-hairpin-helix domain B856_08600 PF02576 Uncharacterised BCR, YhbC family COG0779 B856_08600 PF17384 B856_08600 B856_08620 PF03840 Preprotein translocase SecG subunit B856_08625 PF00121 Triosephosphate isomerase B856_08630 PF00437 Type II/IV secretion system protein B856_08630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B856_08635 PF00482 Type II secretion system (T2SS), protein F B856_08640 PF01478 Type IV leader peptidase family B856_08640 PF06750 B856_08640 B856_08645 PF01121 Dephospho-CoA kinase B856_08650 PF00892 EamA-like transporter family B856_08655 PF00588 SpoU rRNA Methylase family B856_08655 PF08032 RNA 2'-O ribose methyltransferase substrate binding B856_08660 PF06865 Protein of unknown function (DUF1255) B856_08670 PF02463 RecF/RecN/SMC N terminal domain B856_08675 PF02622 Uncharacterized ACR, COG1678 B856_08680 PF03652 Uncharacterised protein family (UPF0081) B856_08685 PF13437 HlyD family secretion protein B856_08685 PF13533 Biotin-lipoyl like B856_08690 PF07869 B856_08690 B856_08695 PF04632 B856_08695 B856_08700 PF01614 Bacterial transcriptional regulator B856_08705 PF13532 2OG-Fe(II) oxygenase superfamily B856_08710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_08710 PF12833 Helix-turn-helix domain B856_08715 PF01066 CDP-alcohol phosphatidyltransferase B856_08720 PF13622 Thioesterase-like superfamily B856_08725 PF01541 GIY-YIG catalytic domain B856_08725 PF02151 UvrB/uvrC motif B856_08725 PF08459 UvrC Helix-hairpin-helix N-terminal B856_08725 PF14520 Helix-hairpin-helix domain B856_08745 PF05118 Aspartyl/Asparaginyl beta-hydroxylase B856_08750 PF00378 Enoyl-CoA hydratase/isomerase family B856_08750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_08750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_08755 PF00108 Thiolase, N-terminal domain B856_08755 PF02803 Thiolase, C-terminal domain B856_08770 PF06821 Serine hydrolase B856_08775 PF13411 MerR HTH family regulatory protein B856_08785 PF01323 DSBA-like thioredoxin domain B856_08800 PF00183 Hsp90 protein B856_08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_08810 PF03922 OmpW family B856_08815 PF03553 B856_08815 B856_08815 PF13726 B856_08815 B856_08820 PF00561 alpha/beta hydrolase fold B856_08825 PF14539 Domain of unknown function (DUF4442) B856_08830 PF13441 B856_08830 B856_08840 PF00623 RNA polymerase Rpb1, domain 2 B856_08840 PF04983 RNA polymerase Rpb1, domain 3 B856_08840 PF04997 RNA polymerase Rpb1, domain 1 B856_08840 PF04998 RNA polymerase Rpb1, domain 5 B856_08840 PF05000 RNA polymerase Rpb1, domain 4 B856_08845 PF00562 RNA polymerase Rpb2, domain 6 B856_08845 PF04560 RNA polymerase Rpb2, domain 7 B856_08845 PF04561 RNA polymerase Rpb2, domain 2 B856_08845 PF04563 RNA polymerase beta subunit B856_08845 PF04565 RNA polymerase Rpb2, domain 3 B856_08845 PF10385 RNA polymerase beta subunit external 1 domain B856_08850 PF00542 Ribosomal protein L7/L12 C-terminal domain B856_08850 PF16320 B856_08850 B856_08855 PF00466 Ribosomal protein L10 B856_08860 PF00687 Ribosomal protein L1p/L10e family B856_08865 PF00298 Ribosomal protein L11, RNA binding domain B856_08865 PF03946 Ribosomal protein L11, N-terminal domain B856_08870 PF02357 Transcription termination factor nusG B856_08875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B856_08900 PF01545 Cation efflux family B856_08905 PF00873 AcrB/AcrD/AcrF family B856_08910 PF16576 B856_08910 B856_08915 PF02321 Outer membrane efflux protein B856_08930 PF04191 Phospholipid methyltransferase B856_08955 PF08238 Sel1 repeat B856_08960 PF00005 ABC transporter B856_08960 PF12848 ABC transporter B856_08965 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_08970 PF00106 short chain dehydrogenase B856_08975 PF00484 Carbonic anhydrase B856_08975 PF00916 B856_08975 B856_08980 PF00575 S1 RNA binding domain B856_08980 PF09371 Tex-like protein N-terminal domain B856_08980 PF12836 Helix-hairpin-helix motif B856_08980 PF16921 B856_08980 B856_08985 PF00072 Response regulator receiver domain B856_08985 PF00486 Transcriptional regulatory protein, C terminal B856_08990 PF00512 His Kinase A (phospho-acceptor) domain B856_08990 PF00672 HAMP domain B856_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_08995 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain B856_08995 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain B856_09000 PF00583 Acetyltransferase (GNAT) family B856_09005 PF00270 DEAD/DEAH box helicase B856_09005 PF00271 Helicase conserved C-terminal domain B856_09010 PF00459 Inositol monophosphatase family B856_09015 PF02779 Transketolase, pyrimidine binding domain B856_09015 PF02780 Transketolase, C-terminal domain B856_09015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase B856_09020 PF00925 GTP cyclohydrolase II B856_09025 PF01218 Coproporphyrinogen III oxidase B856_09030 PF01488 Shikimate / quinate 5-dehydrogenase B856_09030 PF08501 Shikimate dehydrogenase substrate binding domain B856_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_09040 PF02770 Acyl-CoA dehydrogenase, middle domain B856_09040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_09040 PF12418 B856_09040 B856_09040 PF12806 B856_09040 B856_09050 PF04024 B856_09050 B856_09055 PF00571 CBS domain B856_09055 PF04982 B856_09055 B856_09060 PF13566 B856_09060 B856_09070 PF07007 Protein of unknown function (DUF1311) B856_09080 PF02091 Glycyl-tRNA synthetase alpha subunit B856_09085 PF02092 B856_09085 B856_09085 PF05746 DALR anticodon binding domain B856_09090 PF03795 YCII-related domain B856_09095 PF00892 EamA-like transporter family B856_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_09100 PF03466 LysR substrate binding domain B856_09115 PF00082 Subtilase family B856_09130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family B856_09135 PF04996 Succinylarginine dihydrolase B856_09140 PF00171 Aldehyde dehydrogenase family B856_09145 PF04958 Arginine N-succinyltransferase beta subunit B856_09150 PF00202 Aminotransferase class-III B856_09155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_09155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B856_09165 PF00324 Amino acid permease B856_09175 PF08241 Methyltransferase domain B856_09190 PF10107 B856_09190 B856_09195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B856_09200 PF01594 B856_09200 B856_09205 PF00080 Copper/zinc superoxide dismutase (SODC) B856_09210 PF12805 B856_09210 B856_09210 PF13515 B856_09210 B856_09215 PF07690 Major Facilitator Superfamily B856_09225 PF02525 Flavodoxin-like fold B856_09230 PF03992 Antibiotic biosynthesis monooxygenase B856_09240 PF01565 FAD binding domain B856_09240 PF02913 FAD linked oxidases, C-terminal domain B856_09245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_09245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_09250 PF00892 EamA-like transporter family B856_09255 PF00892 EamA-like transporter family B856_09260 PF01814 Hemerythrin HHE cation binding domain B856_09265 PF01925 B856_09265 B856_09270 PF01509 TruB family pseudouridylate synthase (N terminal domain) B856_09270 PF09157 Pseudouridine synthase II TruB, C-terminal B856_09270 PF16198 B856_09270 B856_09275 PF03280 Proteobacterial lipase chaperone protein B856_09280 PF00561 alpha/beta hydrolase fold B856_09285 PF01245 Ribosomal protein L19 B856_09290 PF01746 tRNA (Guanine-1)-methyltransferase B856_09295 PF01782 RimM N-terminal domain B856_09295 PF05239 PRC-barrel domain B856_09300 PF00886 Ribosomal protein S16 B856_09305 PF07963 Prokaryotic N-terminal methylation motif B856_09305 PF16732 B856_09305 B856_09310 PF07963 Prokaryotic N-terminal methylation motif B856_09310 PF16732 B856_09310 B856_09315 PF05567 Neisseria PilC beta-propeller domain B856_09315 PF13519 von Willebrand factor type A domain B856_09325 PF07963 Prokaryotic N-terminal methylation motif B856_09325 PF16074 B856_09325 B856_09330 PF07963 Prokaryotic N-terminal methylation motif B856_09335 PF07963 Prokaryotic N-terminal methylation motif B856_09335 PF12019 Type II transport protein GspH B856_09340 PF02401 LytB protein B856_09345 PF00625 Guanylate kinase B856_09350 PF01192 RNA polymerase Rpb6 B856_09355 PF02824 TGS domain B856_09355 PF13328 HD domain B856_09360 PF01042 Endoribonuclease L-PSP B856_09365 PF04324 BFD-like [2Fe-2S] binding domain B856_09370 PF00210 Ferritin-like domain B856_09375 PF04932 B856_09375 B856_09375 PF11846 B856_09375 B856_09375 PF15864 B856_09375 B856_09380 PF04932 B856_09380 B856_09390 PF04536 TLP18 B856_09395 PF04536 TLP18 B856_09400 PF04011 LemA family B856_09405 PF10118 B856_09405 B856_09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_09410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B856_09415 PF00310 Glutamine amidotransferases class-II B856_09415 PF01493 GXGXG motif B856_09415 PF01645 Conserved region in glutamate synthase B856_09415 PF04898 Glutamate synthase central domain B856_09425 PF01761 3-dehydroquinate synthase B856_09430 PF01202 Shikimate kinase B856_09435 PF00263 B856_09435 B856_09435 PF03958 Bacterial type II/III secretion system short domain B856_09435 PF07660 Secretin and TonB N terminus short domain B856_09435 PF11741 AMIN domain B856_09440 PF04351 Pilus assembly protein, PilP B856_09445 PF04350 Pilus assembly protein, PilO B856_09450 PF05137 B856_09450 B856_09455 PF11104 Type IV pilus assembly protein PilM; B856_09460 PF00905 Penicillin binding protein transpeptidase domain B856_09460 PF00912 Transglycosylase B856_09460 PF17092 B856_09460 B856_09465 PF08241 Methyltransferase domain B856_09475 PF00953 Glycosyl transferase family 4 B856_09480 PF01225 Mur ligase family, catalytic domain B856_09480 PF02875 Mur ligase family, glutamate ligase domain B856_09480 PF08245 Mur ligase middle domain B856_09485 PF02875 Mur ligase family, glutamate ligase domain B856_09485 PF08245 Mur ligase middle domain B856_09490 PF00905 Penicillin binding protein transpeptidase domain B856_09490 PF03717 Penicillin-binding Protein dimerisation domain B856_09495 PF04999 B856_09495 B856_09500 PF01795 MraW methylase family B856_09505 PF13531 Bacterial extracellular solute-binding protein B856_09515 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_09535 PF00324 Amino acid permease B856_09545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B856_09550 PF07859 alpha/beta hydrolase fold B856_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_09570 PF03466 LysR substrate binding domain B856_09575 PF01025 GrpE B856_09585 PF00012 Hsp70 protein B856_09590 PF00413 Matrixin B856_09595 PF00413 Matrixin B856_09605 PF01471 Putative peptidoglycan binding domain B856_09605 PF13406 Transglycosylase SLT domain B856_09610 PF02222 ATP-grasp domain B856_09615 PF00731 AIR carboxylase B856_09625 PF04342 B856_09625 B856_09630 PF01225 Mur ligase family, catalytic domain B856_09630 PF02875 Mur ligase family, glutamate ligase domain B856_09630 PF08245 Mur ligase middle domain B856_09635 PF06772 B856_09635 B856_09640 PF01569 PAP2 superfamily B856_09645 PF03741 B856_09645 B856_09655 PF03738 Glutathionylspermidine synthase preATP-grasp B856_09660 PF00355 Rieske [2Fe-2S] domain B856_09665 PF01979 Amidohydrolase family B856_09675 PF00156 Phosphoribosyl transferase domain B856_09680 PF04226 B856_09680 B856_09685 PF10411 Disulfide bond isomerase protein N-terminus B856_09685 PF13098 Thioredoxin-like domain B856_09690 PF01545 Cation efflux family B856_09695 PF02583 Metal-sensitive transcriptional repressor B856_09700 PF01926 50S ribosome-binding GTPase B856_09700 PF10396 GTP-binding protein TrmE N-terminus B856_09700 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE B856_09705 PF02096 60Kd inner membrane protein B856_09705 PF14849 YidC periplasmic domain B856_09710 PF01809 B856_09710 B856_09715 PF00825 Ribonuclease P B856_09720 PF00468 Ribosomal protein L34 B856_09725 PF00308 Bacterial dnaA protein B856_09725 PF08299 Bacterial dnaA protein helix-turn-helix B856_09725 PF11638 DnaA N-terminal domain B856_09730 PF00712 DNA polymerase III beta subunit, N-terminal domain B856_09730 PF02767 DNA polymerase III beta subunit, central domain B856_09730 PF02768 DNA polymerase III beta subunit, C-terminal domain B856_09735 PF02463 RecF/RecN/SMC N terminal domain B856_09740 PF00204 DNA gyrase B B856_09740 PF00986 DNA gyrase B subunit, carboxyl terminus B856_09740 PF01751 Toprim domain B856_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_09745 PF07361 Cytochrome b562 B856_09750 PF09335 B856_09750 B856_09755 PF00005 ABC transporter B856_09755 PF12848 ABC transporter B856_09775 PF01521 Iron-sulphur cluster biosynthesis B856_09780 PF00561 alpha/beta hydrolase fold B856_09785 PF03702 Uncharacterised protein family (UPF0075) B856_09790 PF00579 tRNA synthetases class I (W and Y) B856_09800 PF00920 Dehydratase family B856_09805 PF01081 KDPG and KHG aldolase B856_09810 PF02447 B856_09810 B856_09815 PF01202 Shikimate kinase B856_09820 PF00171 Aldehyde dehydrogenase family B856_09825 PF00171 Aldehyde dehydrogenase family B856_09830 PF00561 alpha/beta hydrolase fold B856_09835 PF04072 Leucine carboxyl methyltransferase B856_09840 PF00933 Glycosyl hydrolase family 3 N terminal domain B856_09845 PF00595 PDZ domain (Also known as DHR or GLGF) B856_09845 PF03572 Peptidase family S41 B856_09845 PF11818 B856_09845 B856_09850 PF00534 Glycosyl transferases group 1 B856_09850 PF13439 Glycosyltransferase Family 4 B856_09855 PF01569 PAP2 superfamily B856_09860 PF04384 Iron-sulphur cluster assembly B856_09865 PF00334 Nucleoside diphosphate kinase B856_09870 PF04055 Radical SAM superfamily B856_09875 PF13432 Tetratricopeptide repeat B856_09880 PF13413 Helix-turn-helix domain B856_09880 PF13464 B856_09880 B856_09885 PF04551 GcpE protein B856_09890 PF03129 Anticodon binding domain B856_09890 PF13393 Histidyl-tRNA synthetase B856_09895 PF09976 Tetratricopeptide repeat B856_09900 PF13360 PQQ-like domain B856_09905 PF01926 50S ribosome-binding GTPase B856_09905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B856_09910 PF13723 B856_09910 B856_09915 PF01553 Acyltransferase B856_09920 PF00550 Phosphopantetheine attachment site B856_09925 PF00550 Phosphopantetheine attachment site B856_09930 PF04279 B856_09930 B856_09935 PF00501 AMP-binding enzyme B856_09935 PF13193 AMP-binding enzyme C-terminal domain B856_09940 PF00535 Glycosyl transferase family 2 B856_09945 PF03279 B856_09945 B856_09950 PF00221 Aromatic amino acid lyase B856_09955 PF13279 Thioesterase-like superfamily B856_09960 PF03548 Outer membrane lipoprotein carrier protein LolA B856_09970 PF01494 FAD binding domain B856_09975 PF11659 B856_09975 B856_09980 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_09980 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_09990 PF13561 Enoyl-(Acyl carrier protein) reductase B856_09995 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_09995 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_10005 PF01648 4'-phosphopantetheinyl transferase superfamily B856_10010 PF02556 Preprotein translocase subunit SecB B856_10015 PF00462 Glutaredoxin B856_10020 PF00581 Rhodanese-like domain B856_10025 PF03193 Protein of unknown function, DUF258 B856_10030 PF00929 Exonuclease B856_10035 PF12811 B856_10035 B856_10040 PF13561 Enoyl-(Acyl carrier protein) reductase B856_10045 PF02321 Outer membrane efflux protein B856_10050 PF00005 ABC transporter B856_10050 PF02687 B856_10050 B856_10050 PF12704 MacB-like periplasmic core domain B856_10055 PF16576 B856_10055 B856_10060 PF06144 DNA polymerase III, delta subunit B856_10070 PF00133 tRNA synthetases class I (I, L, M and V) B856_10070 PF08264 Anticodon-binding domain of tRNA B856_10070 PF09334 tRNA synthetases class I (M) B856_10070 PF13603 Leucyl-tRNA synthetase, Domain 2 B856_10075 PF13511 B856_10075 B856_10080 PF00205 Thiamine pyrophosphate enzyme, central domain B856_10080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_10080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_10085 PF10369 Small subunit of acetolactate synthase B856_10085 PF13710 ACT domain B856_10090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain B856_10090 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain B856_10095 PF00563 EAL domain B856_10095 PF00990 GGDEF domain B856_10100 PF00440 Bacterial regulatory proteins, tetR family B856_10105 PF00440 Bacterial regulatory proteins, tetR family B856_10115 PF00009 Elongation factor Tu GTP binding domain B856_10115 PF16658 B856_10115 B856_10125 PF11738 Protein of unknown function (DUF3298) B856_10130 PF01026 TatD related DNase B856_10135 PF00330 Aconitase family (aconitate hydratase) B856_10135 PF00694 Aconitase C-terminal domain B856_10140 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease B856_10145 PF00899 ThiF family B856_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_10150 PF03466 LysR substrate binding domain B856_10160 PF01207 Dihydrouridine synthase (Dus) B856_10165 PF07690 Major Facilitator Superfamily B856_10170 PF01042 Endoribonuclease L-PSP B856_10175 PF00892 EamA-like transporter family B856_10180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B856_10180 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B856_10185 PF12769 Domain of unknown function (DUF3814) B856_10190 PF02233 NAD(P) transhydrogenase beta subunit B856_10195 PF00106 short chain dehydrogenase B856_10200 PF02410 Oligomerisation domain B856_10205 PF01261 Xylose isomerase-like TIM barrel B856_10210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B856_10210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B856_10215 PF00378 Enoyl-CoA hydratase/isomerase family B856_10220 PF00072 Response regulator receiver domain B856_10220 PF00512 His Kinase A (phospho-acceptor) domain B856_10220 PF01627 Hpt domain B856_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_10225 PF00291 Pyridoxal-phosphate dependent enzyme B856_10230 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB B856_10235 PF05958 tRNA (Uracil-5-)-methyltransferase B856_10240 PF02824 TGS domain B856_10240 PF04607 Region found in RelA / SpoT proteins B856_10240 PF13291 ACT domain B856_10240 PF13328 HD domain B856_10245 PF00106 short chain dehydrogenase B856_10250 PF03819 MazG nucleotide pyrophosphohydrolase domain B856_10255 PF12836 Helix-hairpin-helix motif B856_10260 PF01743 Poly A polymerase head domain B856_10260 PF12626 Polymerase A arginine-rich C-terminus B856_10260 PF12627 Probable RNA and SrmB- binding site of polymerase A B856_10265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B856_10270 PF02548 Ketopantoate hydroxymethyltransferase B856_10275 PF02569 Pantoate-beta-alanine ligase B856_10280 PF03668 B856_10280 B856_10285 PF00381 PTS HPr component phosphorylation site B856_10290 PF04751 Protein of unknown function (DUF615) B856_10295 PF00501 AMP-binding enzyme B856_10295 PF13193 AMP-binding enzyme C-terminal domain B856_10300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_10300 PF02824 TGS domain B856_10300 PF03129 Anticodon binding domain B856_10300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B856_10305 PF00707 Translation initiation factor IF-3, C-terminal domain B856_10310 PF00043 Glutathione S-transferase, C-terminal domain B856_10310 PF02798 Glutathione S-transferase, N-terminal domain B856_10315 PF09335 B856_10315 B856_10320 PF05977 Transmembrane secretion effector B856_10325 PF01632 Ribosomal protein L35 B856_10330 PF00453 Ribosomal protein L20 B856_10335 PF08719 Domain of unknown function (DUF1768) B856_10340 PF00583 Acetyltransferase (GNAT) family B856_10350 PF01409 tRNA synthetases class II core domain (F) B856_10350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B856_10355 PF01588 Putative tRNA binding domain B856_10355 PF03147 Ferredoxin-fold anticodon binding domain B856_10355 PF03483 B3/4 domain B856_10355 PF03484 tRNA synthetase B5 domain B856_10360 PF00216 Bacterial DNA-binding protein B856_10370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B856_10370 PF07497 Rho termination factor, RNA-binding domain B856_10370 PF07498 Rho termination factor, N-terminal domain B856_10375 PF00085 Thioredoxin B856_10380 PF01966 HD domain B856_10380 PF02541 Ppx/GppA phosphatase family B856_10385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit B856_10390 PF01171 PP-loop family B856_10390 PF09179 TilS substrate binding domain B856_10390 PF11734 TilS substrate C-terminal domain B856_10395 PF03807 NADP oxidoreductase coenzyme F420-dependent B856_10395 PF14748 Pyrroline-5-carboxylate reductase dimerisation B856_10400 PF02325 B856_10400 B856_10405 PF00476 DNA polymerase family A B856_10405 PF01367 5'-3' exonuclease, C-terminal SAM fold B856_10405 PF01612 3'-5' exonuclease B856_10405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B856_10415 PF12710 haloacid dehalogenase-like hydrolase B856_10435 PF00575 S1 RNA binding domain B856_10435 PF00773 RNB domain B856_10435 PF08206 Ribonuclease B OB domain B856_10440 PF01432 Peptidase family M3 B856_10445 PF09526 B856_10445 B856_10455 PF06808 B856_10455 B856_10460 PF01694 Rhomboid family B856_10485 PF03937 Flavinator of succinate dehydrogenase B856_10490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_10490 PF02770 Acyl-CoA dehydrogenase, middle domain B856_10490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_10495 PF00743 Flavin-binding monooxygenase-like B856_10495 PF13450 NAD(P)-binding Rossmann-like domain B856_10500 PF01196 Ribosomal protein L17 B856_10505 PF01000 RNA polymerase Rpb3/RpoA insert domain B856_10505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain B856_10505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain B856_10510 PF00163 Ribosomal protein S4/S9 N-terminal domain B856_10510 PF01479 S4 domain B856_10515 PF00411 Ribosomal protein S11 B856_10520 PF00416 Ribosomal protein S13/S18 B856_10525 PF00444 Ribosomal protein L36 B856_10530 PF00344 SecY translocase B856_10535 PF00828 Ribosomal protein L18e/L15 B856_10540 PF00327 Ribosomal protein L30p/L7e B856_10545 PF00333 Ribosomal protein S5, N-terminal domain B856_10545 PF03719 Ribosomal protein S5, C-terminal domain B856_10550 PF00861 Ribosomal L18p/L5e family B856_10555 PF00347 Ribosomal protein L6 B856_10560 PF00410 Ribosomal protein S8 B856_10565 PF00253 Ribosomal protein S14p/S29e B856_10570 PF00281 Ribosomal protein L5 B856_10570 PF00673 ribosomal L5P family C-terminus B856_10575 PF00467 KOW motif B856_10575 PF17136 B856_10575 B856_10580 PF00238 Ribosomal protein L14p/L23e B856_10585 PF00366 Ribosomal protein S17 B856_10590 PF00831 Ribosomal L29 protein B856_10595 PF00252 Ribosomal protein L16p/L10e B856_10600 PF00189 Ribosomal protein S3, C-terminal domain B856_10600 PF07650 KH domain B856_10605 PF00237 Ribosomal protein L22p/L17e B856_10610 PF00203 Ribosomal protein S19 B856_10615 PF00181 Ribosomal Proteins L2, RNA binding domain B856_10615 PF03947 Ribosomal Proteins L2, C-terminal domain B856_10620 PF00276 Ribosomal protein L23 B856_10625 PF00573 Ribosomal protein L4/L1 family B856_10630 PF00297 Ribosomal protein L3 B856_10635 PF00338 Ribosomal protein S10p/S20e B856_10640 PF00117 Glutamine amidotransferase class-I B856_10645 PF01053 Cys/Met metabolism PLP-dependent enzyme B856_10650 PF05872 B856_10650 B856_10655 PF00042 Globin B856_10660 PF02082 Transcriptional regulator B856_10665 PF01926 50S ribosome-binding GTPase B856_10670 PF10118 B856_10670 B856_10675 PF00375 Sodium:dicarboxylate symporter family B856_10680 PF13622 Thioesterase-like superfamily B856_10685 PF01553 Acyltransferase B856_10695 PF13460 NADH(P)-binding B856_10700 PF00270 DEAD/DEAH box helicase B856_10700 PF00271 Helicase conserved C-terminal domain B856_10700 PF17191 B856_10700 B856_10705 PF00156 Phosphoribosyl transferase domain B856_10710 PF00293 NUDIX domain B856_10715 PF03641 Possible lysine decarboxylase B856_10720 PF01544 CorA-like Mg2+ transporter protein B856_10725 PF13466 STAS domain B856_10730 PF05494 Toluene tolerance, Ttg2 B856_10735 PF02470 B856_10735 B856_10740 PF02405 B856_10740 B856_10745 PF00005 ABC transporter B856_10760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_10760 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_10770 PF04273 Putative phosphatase (DUF442) B856_10775 PF12146 Putative lysophospholipase B856_10780 PF00085 Thioredoxin B856_10785 PF03061 Thioesterase superfamily B856_10790 PF14539 Domain of unknown function (DUF4442) B856_10795 PF04461 Protein of unknown function (DUF520) B856_10800 PF00581 Rhodanese-like domain B856_10805 PF01266 FAD dependent oxidoreductase B856_10805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase B856_10815 PF03795 YCII-related domain B856_10820 PF04279 B856_10820 B856_10825 PF02811 PHP domain B856_10830 PF01062 B856_10830 B856_10835 PF04002 RadC-like JAB domain B856_10840 PF02441 Flavoprotein B856_10840 PF04127 DNA / pantothenate metabolism flavoprotein B856_10845 PF02355 Protein export membrane protein B856_10845 PF07549 SecD/SecF GG Motif B856_10850 PF02355 Protein export membrane protein B856_10850 PF07549 SecD/SecF GG Motif B856_10850 PF13721 SecD export protein N-terminal TM region B856_10855 PF02699 Preprotein translocase subunit B856_10860 PF01702 Queuine tRNA-ribosyltransferase B856_10865 PF04011 LemA family B856_10875 PF02547 Queuosine biosynthesis protein B856_10885 PF00512 His Kinase A (phospho-acceptor) domain B856_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_10890 PF03710 Glutamate-ammonia ligase adenylyltransferase B856_10890 PF08335 GlnD PII-uridylyltransferase B856_10895 PF01063 Aminotransferase class IV B856_10900 PF06258 B856_10900 B856_10905 PF13524 Glycosyl transferases group 1 B856_10910 PF01522 Polysaccharide deacetylase B856_10915 PF00535 Glycosyl transferase family 2 B856_10920 PF00534 Glycosyl transferases group 1 B856_10920 PF13439 Glycosyltransferase Family 4 B856_10930 PF01755 B856_10930 B856_10945 PF11380 B856_10945 B856_10945 PF17102 B856_10945 B856_10950 PF00152 tRNA synthetases class II (D, K and N) B856_10950 PF01336 OB-fold nucleic acid binding domain B856_10950 PF02938 GAD domain B856_10955 PF13803 B856_10955 B856_10960 PF00593 TonB dependent receptor B856_10960 PF07715 TonB-dependent Receptor Plug Domain B856_10965 PF13091 PLD-like domain B856_10975 PF11776 Domain of unknown function (DUF3315) B856_10980 PF06146 B856_10980 B856_10985 PF00043 Glutathione S-transferase, C-terminal domain B856_10985 PF02798 Glutathione S-transferase, N-terminal domain B856_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_10990 PF03466 LysR substrate binding domain B856_10995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_10995 PF02770 Acyl-CoA dehydrogenase, middle domain B856_10995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_10995 PF12418 B856_10995 B856_10995 PF12806 B856_10995 B856_11000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_11000 PF02770 Acyl-CoA dehydrogenase, middle domain B856_11000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_11000 PF12418 B856_11000 B856_11000 PF12806 B856_11000 B856_11010 PF00512 His Kinase A (phospho-acceptor) domain B856_11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_11015 PF00072 Response regulator receiver domain B856_11015 PF00486 Transcriptional regulatory protein, C terminal B856_11020 PF02696 B856_11020 B856_11025 PF00487 B856_11025 B856_11030 PF03724 META domain B856_11035 PF03009 Glycerophosphoryl diester phosphodiesterase family B856_11040 PF01923 Cobalamin adenosyltransferase B856_11045 PF00593 TonB dependent receptor B856_11045 PF07715 TonB-dependent Receptor Plug Domain B856_11050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B856_11055 PF00291 Pyridoxal-phosphate dependent enzyme B856_11060 PF07566 Domain of Unknown Function (DUF1543) B856_11065 PF10974 B856_11065 B856_11070 PF10118 B856_11070 B856_11075 PF12625 B856_11075 B856_11075 PF12833 Helix-turn-helix domain B856_11080 PF00290 Tryptophan synthase alpha chain B856_11085 PF01039 Carboxyl transferase domain B856_11090 PF08245 Mur ligase middle domain B856_11095 PF05036 Sporulation related domain B856_11100 PF00782 Dual specificity phosphatase, catalytic domain B856_11105 PF00753 Metallo-beta-lactamase superfamily B856_11110 PF00578 AhpC/TSA family B856_11110 PF10417 C-terminal domain of 1-Cys peroxiredoxin B856_11115 PF01043 SecA preprotein cross-linking domain B856_11115 PF02810 SEC-C motif B856_11115 PF07516 SecA Wing and Scaffold domain B856_11115 PF07517 SecA DEAD-like domain B856_11125 PF00083 Sugar (and other) transporter B856_11130 PF03006 B856_11130 B856_11140 PF13673 Acetyltransferase (GNAT) domain B856_11145 PF01734 Patatin-like phospholipase B856_11155 PF00378 Enoyl-CoA hydratase/isomerase family B856_11155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B856_11155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B856_11160 PF00108 Thiolase, N-terminal domain B856_11160 PF02803 Thiolase, C-terminal domain B856_11165 PF12625 B856_11165 B856_11165 PF12833 Helix-turn-helix domain B856_11170 PF02515 CoA-transferase family III B856_11175 PF04966 Carbohydrate-selective porin, OprB family B856_11180 PF01011 PQQ enzyme repeat B856_11180 PF13360 PQQ-like domain B856_11185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B856_11185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B856_11190 PF06073 B856_11190 B856_11195 PF00893 Small Multidrug Resistance protein B856_11200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_11205 PF00108 Thiolase, N-terminal domain B856_11205 PF02803 Thiolase, C-terminal domain B856_11210 PF12019 Type II transport protein GspH B856_11215 PF00691 OmpA family B856_11215 PF13505 Outer membrane protein beta-barrel domain B856_11225 PF01139 tRNA-splicing ligase RtcB B856_11230 PF00324 Amino acid permease B856_11235 PF05175 Methyltransferase small domain B856_11235 PF08468 Methyltransferase small domain N-terminal B856_11240 PF00860 Permease family B856_11245 PF00009 Elongation factor Tu GTP binding domain B856_11245 PF00679 Elongation factor G C-terminus B856_11245 PF03144 Elongation factor Tu domain 2 B856_11250 PF01741 Large-conductance mechanosensitive channel, MscL B856_11255 PF06094 AIG2-like family B856_11260 PF00639 PPIC-type PPIASE domain B856_11265 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain B856_11265 PF06827 Zinc finger found in FPG and IleRS B856_11265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain B856_11270 PF02245 Methylpurine-DNA glycosylase (MPG) B856_11275 PF07715 TonB-dependent Receptor Plug Domain B856_11280 PF14052 Capsule assembly protein Wzi B856_11285 PF00152 tRNA synthetases class II (D, K and N) B856_11285 PF01336 OB-fold nucleic acid binding domain B856_11290 PF05728 Uncharacterised protein family (UPF0227) B856_11295 PF08327 Activator of Hsp90 ATPase homolog 1-like protein B856_11300 PF00301 Rubredoxin B856_11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_11310 PF00561 alpha/beta hydrolase fold B856_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_11315 PF03466 LysR substrate binding domain B856_11320 PF05036 Sporulation related domain B856_11325 PF02503 Polyphosphate kinase middle domain B856_11325 PF13089 Polyphosphate kinase N-terminal domain B856_11325 PF13090 Polyphosphate kinase C-terminal domain B856_11330 PF00912 Transglycosylase B856_11335 PF01694 Rhomboid family B856_11340 PF02687 B856_11340 B856_11345 PF00005 ABC transporter B856_11350 PF13472 GDSL-like Lipase/Acylhydrolase family B856_11355 PF00484 Carbonic anhydrase B856_11360 PF12697 Alpha/beta hydrolase family B856_11370 PF00593 TonB dependent receptor B856_11370 PF07715 TonB-dependent Receptor Plug Domain B856_11375 PF01106 NifU-like domain B856_11375 PF01521 Iron-sulphur cluster biosynthesis B856_11380 PF01694 Rhomboid family B856_11385 PF00884 Sulfatase B856_11390 PF03781 Sulfatase-modifying factor enzyme 1 B856_11405 PF00291 Pyridoxal-phosphate dependent enzyme B856_11410 PF01384 B856_11410 B856_11415 PF00809 Pterin binding enzyme B856_11415 PF02310 B12 binding domain B856_11415 PF02574 Homocysteine S-methyltransferase B856_11415 PF02607 B12 binding domain B856_11415 PF02965 Vitamin B12 dependent methionine synthase, activation domain B856_11420 PF02779 Transketolase, pyrimidine binding domain B856_11420 PF02780 Transketolase, C-terminal domain B856_11425 PF00456 Transketolase, thiamine diphosphate binding domain B856_11430 PF07690 Major Facilitator Superfamily B856_11435 PF13561 Enoyl-(Acyl carrier protein) reductase B856_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_11440 PF03466 LysR substrate binding domain B856_11450 PF01263 Aldose 1-epimerase B856_11455 PF07690 Major Facilitator Superfamily B856_11460 PF12833 Helix-turn-helix domain B856_11465 PF04960 Glutaminase B856_11470 PF01327 Polypeptide deformylase B856_11480 PF07690 Major Facilitator Superfamily B856_11490 PF00205 Thiamine pyrophosphate enzyme, central domain B856_11490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B856_11490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B856_11495 PF00171 Aldehyde dehydrogenase family B856_11500 PF01958 Domain of unknown function DUF108 B856_11500 PF03447 Homoserine dehydrogenase, NAD binding domain B856_11505 PF00106 short chain dehydrogenase B856_11510 PF12697 Alpha/beta hydrolase family B856_11515 PF07883 Cupin domain B856_11520 PF07690 Major Facilitator Superfamily B856_11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_11525 PF14759 Reductase C-terminal B856_11530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_11535 PF13561 Enoyl-(Acyl carrier protein) reductase B856_11540 PF00355 Rieske [2Fe-2S] domain B856_11550 PF00355 Rieske [2Fe-2S] domain B856_11555 PF01614 Bacterial transcriptional regulator B856_11555 PF09339 IclR helix-turn-helix domain B856_11565 PF04973 B856_11565 B856_11570 PF00378 Enoyl-CoA hydratase/isomerase family B856_11575 PF13994 B856_11575 B856_11580 PF13641 Glycosyltransferase like family 2 B856_11585 PF01522 Polysaccharide deacetylase B856_11585 PF14883 Hypothetical glycosyl hydrolase family 13 B856_11590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B856_11595 PF07152 YaeQ protein B856_11600 PF00375 Sodium:dicarboxylate symporter family B856_11605 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_11615 PF03061 Thioesterase superfamily B856_11620 PF01914 B856_11620 B856_11625 PF02028 BCCT family transporter B856_11630 PF02028 BCCT family transporter B856_11635 PF00440 Bacterial regulatory proteins, tetR family B856_11635 PF13977 Bacterial transcriptional repressor B856_11640 PF00171 Aldehyde dehydrogenase family B856_11645 PF00732 GMC oxidoreductase B856_11645 PF05199 GMC oxidoreductase B856_11650 PF06039 B856_11650 B856_11665 PF02574 Homocysteine S-methyltransferase B856_11670 PF13520 Amino acid permease B856_11675 PF12697 Alpha/beta hydrolase family B856_11680 PF06912 B856_11680 B856_11690 PF04304 B856_11690 B856_11695 PF01126 Heme oxygenase B856_11700 PF03544 Gram-negative bacterial TonB protein C-terminal B856_11705 PF04575 B856_11705 B856_11710 PF01298 Transferrin binding protein-like solute binding protein B856_11715 PF00593 TonB dependent receptor B856_11715 PF07660 Secretin and TonB N terminus short domain B856_11715 PF07715 TonB-dependent Receptor Plug Domain B856_11720 PF04773 FecR protein B856_11720 PF16220 B856_11720 B856_11725 PF04542 Sigma-70 region 2 B856_11725 PF08281 Sigma-70, region 4 B856_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_11730 PF03466 LysR substrate binding domain B856_11735 PF00701 Dihydrodipicolinate synthetase family B856_11740 PF00083 Sugar (and other) transporter B856_11760 PF01026 TatD related DNase B856_11765 PF06508 Queuosine biosynthesis protein QueC B856_11775 PF07693 B856_11775 B856_11790 PF04245 B856_11790 B856_11800 PF00436 Single-strand binding protein family B856_11805 PF06048 B856_11805 B856_11830 PF02498 B856_11830 B856_11835 PF14090 B856_11835 B856_11850 PF00589 Phage integrase family B856_11850 PF13356 Domain of unknown function (DUF4102) B856_11860 PF11799 impB/mucB/samB family C-terminal domain B856_11860 PF13438 B856_11860 B856_11870 PF05488 PAAR motif B856_11885 PF16082 B856_11885 B856_11910 PF10547 B856_11910 B856_11920 PF01381 Helix-turn-helix B856_11920 PF06114 Domain of unknown function (DUF955) B856_11965 PF02018 Carbohydrate binding domain B856_11965 PF09327 B856_11965 B856_11965 PF15711 B856_11965 B856_11985 PF05016 Plasmid stabilisation system protein B856_11990 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system B856_12005 PF10547 B856_12005 B856_12060 PF12571 B856_12060 B856_12075 PF01258 Prokaryotic dksA/traR C4-type zinc finger B856_12130 PF10547 B856_12130 B856_12135 PF15919 B856_12135 B856_12160 PF12844 Helix-turn-helix domain B856_12165 PF05866 Endodeoxyribonuclease RusA B856_12190 PF01695 IstB-like ATP binding protein B856_12200 PF00145 C-5 cytosine-specific DNA methylase B856_12210 PF01507 Phosphoadenosine phosphosulfate reductase family B856_12240 PF01381 Helix-turn-helix B856_12245 PF00717 Peptidase S24-like B856_12245 PF01381 Helix-turn-helix B856_12265 PF10065 B856_12265 B856_12290 PF13935 B856_12290 B856_12335 PF08867 B856_12335 B856_12350 PF00589 Phage integrase family B856_12350 PF13356 Domain of unknown function (DUF4102) B856_12355 PF01019 Gamma-glutamyltranspeptidase B856_12360 PF07690 Major Facilitator Superfamily B856_12365 PF00529 HlyD family secretion protein B856_12365 PF16576 B856_12365 B856_12370 PF03061 Thioesterase superfamily B856_12375 PF00490 Delta-aminolevulinic acid dehydratase B856_12380 PF01266 FAD dependent oxidoreductase B856_12385 PF01370 NAD dependent epimerase/dehydratase family B856_12385 PF08338 Domain of unknown function (DUF1731) B856_12400 PF02566 OsmC-like protein B856_12405 PF00149 Calcineurin-like phosphoesterase B856_12405 PF12320 Type 5 capsule protein repressor C-terminal domain B856_12410 PF13476 AAA domain B856_12410 PF13558 Putative exonuclease SbcCD, C subunit B856_12420 PF01168 Alanine racemase, N-terminal domain B856_12425 PF00437 Type II/IV secretion system protein B856_12430 PF00437 Type II/IV secretion system protein B856_12435 PF01475 Ferric uptake regulator family B856_12440 PF04355 SmpA / OmlA family B856_12445 PF03658 RnfH family Ubiquitin B856_12455 PF01814 Hemerythrin HHE cation binding domain B856_12460 PF13230 Glutamine amidotransferases class-II B856_12465 PF13444 Acetyltransferase (GNAT) domain B856_12470 PF00696 Amino acid kinase family B856_12475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B856_12475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B856_12475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B856_12480 PF00692 dUTPase B856_12485 PF00580 UvrD/REP helicase N-terminal domain B856_12485 PF13361 UvrD-like helicase C-terminal domain B856_12490 PF00691 OmpA family B856_12495 PF01553 Acyltransferase B856_12505 PF03775 Septum formation inhibitor MinC, C-terminal domain B856_12510 PF13614 AAA domain B856_12515 PF03776 Septum formation topological specificity factor MinE B856_12525 PF00171 Aldehyde dehydrogenase family B856_12530 PF01636 Phosphotransferase enzyme family B856_12540 PF00300 Histidine phosphatase superfamily (branch 1) B856_12545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_12545 PF02770 Acyl-CoA dehydrogenase, middle domain B856_12545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_12550 PF00106 short chain dehydrogenase B856_12555 PF00158 Sigma-54 interaction domain B856_12555 PF02954 Bacterial regulatory protein, Fis family B856_12555 PF06506 Propionate catabolism activator B856_12560 PF00501 AMP-binding enzyme B856_12560 PF13193 AMP-binding enzyme C-terminal domain B856_12565 PF04341 B856_12565 B856_12570 PF00474 Sodium:solute symporter family B856_12575 PF00107 Zinc-binding dehydrogenase B856_12575 PF08240 Alcohol dehydrogenase GroES-like domain B856_12580 PF00171 Aldehyde dehydrogenase family B856_12585 PF06314 Acetoacetate decarboxylase (ADC) B856_12590 PF00561 alpha/beta hydrolase fold B856_12595 PF00199 Catalase B856_12595 PF06628 Catalase-related immune-responsive B856_12610 PF01965 DJ-1/PfpI family B856_12615 PF07859 alpha/beta hydrolase fold B856_12620 PF01047 MarR family B856_12625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_12630 PF03435 Saccharopine dehydrogenase B856_12635 PF01872 RibD C-terminal domain B856_12640 PF13411 MerR HTH family regulatory protein B856_12645 PF01965 DJ-1/PfpI family B856_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_12655 PF02082 Transcriptional regulator B856_12660 PF12706 Beta-lactamase superfamily domain B856_12665 PF00440 Bacterial regulatory proteins, tetR family B856_12670 PF03992 Antibiotic biosynthesis monooxygenase B856_12675 PF00857 Isochorismatase family B856_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12680 PF03466 LysR substrate binding domain B856_12685 PF07995 Glucose / Sorbosone dehydrogenase B856_12690 PF00999 Sodium/hydrogen exchanger family B856_12690 PF02254 TrkA-N domain B856_12700 PF01546 Peptidase family M20/M25/M40 B856_12700 PF07687 Peptidase dimerisation domain B856_12705 PF00440 Bacterial regulatory proteins, tetR family B856_12710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB B856_12710 PF08479 POTRA domain, ShlB-type B856_12710 PF17287 B856_12710 B856_12715 PF04829 B856_12715 B856_12715 PF04830 B856_12715 B856_12715 PF05860 haemagglutination activity domain B856_12715 PF13018 B856_12715 B856_12735 PF07690 Major Facilitator Superfamily B856_12740 PF04909 Amidohydrolase B856_12745 PF07158 B856_12745 B856_12750 PF00392 Bacterial regulatory proteins, gntR family B856_12750 PF07702 UTRA domain B856_12755 PF08450 SMP-30/Gluconolaconase/LRE-like region B856_12760 PF07690 Major Facilitator Superfamily B856_12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12765 PF03466 LysR substrate binding domain B856_12770 PF04657 B856_12770 B856_12775 PF04657 B856_12775 B856_12780 PF01614 Bacterial transcriptional regulator B856_12780 PF09339 IclR helix-turn-helix domain B856_12785 PF07690 Major Facilitator Superfamily B856_12790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B856_12790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B856_12795 PF03737 Demethylmenaquinone methyltransferase B856_12805 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system B856_12810 PF00353 Hemolysin-type calcium-binding repeat (2 copies) B856_12815 PF13437 HlyD family secretion protein B856_12815 PF13533 Biotin-lipoyl like B856_12820 PF07690 Major Facilitator Superfamily B856_12825 PF00440 Bacterial regulatory proteins, tetR family B856_12825 PF14246 AefR-like transcriptional repressor, C-terminal region B856_12830 PF00171 Aldehyde dehydrogenase family B856_12840 PF00288 GHMP kinases N terminal domain B856_12840 PF08544 GHMP kinases C terminal B856_12845 PF03550 Outer membrane lipoprotein LolB B856_12850 PF13181 Tetratricopeptide repeat B856_12850 PF14559 Tetratricopeptide repeat B856_12855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B856_12855 PF01488 Shikimate / quinate 5-dehydrogenase B856_12855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B856_12860 PF01807 CHC2 zinc finger B856_12860 PF08275 DNA primase catalytic core, N-terminal domain B856_12860 PF10410 DnaB-helicase binding domain of primase B856_12860 PF13662 Toprim domain B856_12865 PF13525 Outer membrane lipoprotein B856_12870 PF00849 RNA pseudouridylate synthase B856_12870 PF01479 S4 domain B856_12875 PF02578 Multi-copper polyphenol oxidoreductase laccase B856_12880 PF03358 NADPH-dependent FMN reductase B856_12885 PF01668 SmpB protein B856_12890 PF01467 Cytidylyltransferase B856_12895 PF00037 4Fe-4S binding domain B856_12905 PF07396 Phosphate-selective porin O and P B856_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_12910 PF03466 LysR substrate binding domain B856_12915 PF00180 Isocitrate/isopropylmalate dehydrogenase B856_12920 PF02028 BCCT family transporter B856_12925 PF07859 alpha/beta hydrolase fold B856_12930 PF00355 Rieske [2Fe-2S] domain B856_12930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_12935 PF00171 Aldehyde dehydrogenase family B856_12940 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_12940 PF00175 Oxidoreductase NAD-binding domain B856_12940 PF00970 Oxidoreductase FAD-binding domain B856_12955 PF00795 Carbon-nitrogen hydrolase B856_12955 PF02540 NAD synthase B856_12965 PF02678 Pirin B856_12965 PF05726 Pirin C-terminal cupin domain B856_12970 PF03653 B856_12970 B856_12975 PF00109 Beta-ketoacyl synthase, N-terminal domain B856_12975 PF02801 Beta-ketoacyl synthase, C-terminal domain B856_12980 PF12787 B856_12980 B856_12985 PF00164 Ribosomal protein S12/S23 B856_12990 PF00177 Ribosomal protein S7p/S5e B856_12995 PF00009 Elongation factor Tu GTP binding domain B856_12995 PF00679 Elongation factor G C-terminus B856_12995 PF03144 Elongation factor Tu domain 2 B856_12995 PF03764 Elongation factor G, domain IV B856_12995 PF14492 Elongation Factor G, domain II B856_13035 PF00589 Phage integrase family B856_13035 PF13356 Domain of unknown function (DUF4102) B856_13040 PF14518 Iron-containing redox enzyme B856_13045 PF00440 Bacterial regulatory proteins, tetR family B856_13050 PF03929 B856_13050 B856_13055 PF01645 Conserved region in glutamate synthase B856_13060 PF12146 Putative lysophospholipase B856_13065 PF02698 DUF218 domain B856_13070 PF01565 FAD binding domain B856_13070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B856_13075 PF01451 Low molecular weight phosphotyrosine protein phosphatase B856_13080 PF10282 Lactonase, 7-bladed beta-propeller B856_13085 PF00465 Iron-containing alcohol dehydrogenase B856_13090 PF13279 Thioesterase-like superfamily B856_13095 PF04185 Phosphoesterase family B856_13095 PF05506 B856_13095 B856_13105 PF12169 DNA polymerase III subunits gamma and tau domain III B856_13105 PF13177 DNA polymerase III, delta subunit B856_13110 PF07690 Major Facilitator Superfamily B856_13115 PF00440 Bacterial regulatory proteins, tetR family B856_13120 PF00144 Beta-lactamase B856_13125 PF01575 MaoC like domain B856_13130 PF13561 Enoyl-(Acyl carrier protein) reductase B856_13135 PF00108 Thiolase, N-terminal domain B856_13135 PF02803 Thiolase, C-terminal domain B856_13140 PF05232 B856_13140 B856_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_13145 PF03466 LysR substrate binding domain B856_13150 PF00923 Transaldolase B856_13155 PF01810 B856_13155 B856_13160 PF01037 AsnC family B856_13160 PF13412 Winged helix-turn-helix DNA-binding B856_13165 PF03594 B856_13165 B856_13170 PF02308 B856_13170 B856_13175 PF00122 E1-E2 ATPase B856_13175 PF00690 Cation transporter/ATPase, N-terminus B856_13175 PF00702 haloacid dehalogenase-like hydrolase B856_13180 PF06271 B856_13180 B856_13195 PF00582 Universal stress protein family B856_13200 PF00005 ABC transporter B856_13215 PF03922 OmpW family B856_13220 PF00593 TonB dependent receptor B856_13220 PF07715 TonB-dependent Receptor Plug Domain B856_13225 PF01381 Helix-turn-helix B856_13250 PF04492 B856_13250 B856_13270 PF04480 Protein of unknown function (DUF559) B856_13330 PF10045 B856_13330 B856_13335 PF03237 Terminase-like family B856_13335 PF17289 B856_13335 B856_13340 PF13264 B856_13340 B856_13345 PF04233 B856_13345 B856_13360 PF13876 B856_13360 B856_13375 PF12949 HeH/LEM domain B856_13410 PF13554 Bacteriophage related domain of unknown function B856_13420 PF08239 Bacterial SH3 domain B856_13455 PF13554 Bacteriophage related domain of unknown function B856_13485 PF10281 B856_13485 B856_13515 PF04233 B856_13515 B856_13520 PF13264 B856_13520 B856_13525 PF17289 B856_13525 B856_13530 PF10045 B856_13530 B856_13545 PF00999 Sodium/hydrogen exchanger family B856_13550 PF04228 B856_13550 B856_13555 PF05661 B856_13555 B856_13560 PF00579 tRNA synthetases class I (W and Y) B856_13565 PF00549 CoA-ligase B856_13565 PF02629 CoA binding domain B856_13570 PF00549 CoA-ligase B856_13570 PF08442 ATP-grasp domain B856_13575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B856_13575 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_13580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B856_13580 PF00364 Biotin-requiring enzyme B856_13580 PF02817 e3 binding domain B856_13585 PF00676 Dehydrogenase E1 component B856_13585 PF02779 Transketolase, pyrimidine binding domain B856_13585 PF16078 B856_13585 B856_13585 PF16870 B856_13585 B856_13590 PF13085 2Fe-2S iron-sulfur cluster binding domain B856_13590 PF13534 4Fe-4S dicluster domain B856_13595 PF00890 FAD binding domain B856_13595 PF02910 Fumarate reductase flavoprotein C-term B856_13600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B856_13605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B856_13610 PF00285 Citrate synthase B856_13615 PF06945 B856_13615 B856_13620 PF00581 Rhodanese-like domain B856_13630 PF03695 Uncharacterised protein family (UPF0149) B856_13640 PF00140 Sigma-70 factor, region 1 B856_13640 PF03979 Sigma-70 factor, region 1 B856_13640 PF04539 Sigma-70 region 3 B856_13640 PF04542 Sigma-70 region 2 B856_13640 PF04545 Sigma-70, region 4 B856_13640 PF04546 Sigma-70, non-essential region B856_13645 PF04359 Protein of unknown function (DUF493) B856_13650 PF03099 Biotin/lipoate A/B protein ligase family B856_13660 PF00465 Iron-containing alcohol dehydrogenase B856_13665 PF00324 Amino acid permease B856_13670 PF12724 Flavodoxin domain B856_13675 PF01638 HxlR-like helix-turn-helix B856_13680 PF00588 SpoU rRNA Methylase family B856_13685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B856_13685 PF10414 Sirohaem synthase dimerisation region B856_13685 PF13241 Putative NAD(P)-binding B856_13690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B856_13690 PF02403 Seryl-tRNA synthetase N-terminal domain B856_13695 PF11738 Protein of unknown function (DUF3298) B856_13700 PF03548 Outer membrane lipoprotein carrier protein LolA B856_13705 PF01016 Ribosomal L27 protein B856_13710 PF00829 Ribosomal prokaryotic L21 protein B856_13720 PF00348 Polyprenyl synthetase B856_13725 PF10136 B856_13725 B856_13730 PF01569 PAP2 superfamily B856_13735 PF00529 HlyD family secretion protein B856_13735 PF16576 B856_13735 B856_13740 PF00873 AcrB/AcrD/AcrF family B856_13745 PF02321 Outer membrane efflux protein B856_13750 PF01906 Putative heavy-metal-binding B856_13755 PF01906 Putative heavy-metal-binding B856_13760 PF13577 SnoaL-like domain B856_13765 PF00106 short chain dehydrogenase B856_13775 PF00133 tRNA synthetases class I (I, L, M and V) B856_13775 PF08264 Anticodon-binding domain of tRNA B856_13775 PF10458 Valyl tRNA synthetase tRNA binding arm B856_13780 PF13649 Methyltransferase domain B856_13790 PF03547 B856_13790 B856_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_13795 PF03466 LysR substrate binding domain B856_13800 PF00909 Ammonium Transporter Family B856_13805 PF01569 PAP2 superfamily B856_13810 PF00512 His Kinase A (phospho-acceptor) domain B856_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_13815 PF00072 Response regulator receiver domain B856_13815 PF00486 Transcriptional regulatory protein, C terminal B856_13830 PF00753 Metallo-beta-lactamase superfamily B856_13830 PF16123 B856_13830 B856_13835 PF00528 Binding-protein-dependent transport system inner membrane component B856_13840 PF00005 ABC transporter B856_13840 PF09383 NIL domain B856_13845 PF03180 NLPA lipoprotein B856_13850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B856_13850 PF02843 Phosphoribosylglycinamide synthetase, C domain B856_13850 PF02844 Phosphoribosylglycinamide synthetase, N domain B856_13855 PF01808 AICARFT/IMPCHase bienzyme B856_13855 PF02142 MGS-like domain B856_13860 PF02954 Bacterial regulatory protein, Fis family B856_13865 PF11906 B856_13865 B856_13870 PF06325 Ribosomal protein L11 methyltransferase (PrmA) B856_13880 PF01134 Glucose inhibited division protein A B856_13880 PF13932 GidA associated domain 3 B856_13890 PF13280 B856_13890 B856_13895 PF14403 B856_13895 B856_13900 PF04168 B856_13900 B856_13905 PF01841 Transglutaminase-like superfamily B856_13905 PF08379 B856_13905 B856_13910 PF00227 Proteasome subunit B856_13915 PF00842 Alanine racemase, C-terminal domain B856_13915 PF01168 Alanine racemase, N-terminal domain B856_13920 PF00772 DnaB-like helicase N terminal domain B856_13920 PF03796 DnaB-like helicase C terminal domain B856_13925 PF01281 Ribosomal protein L9, N-terminal domain B856_13925 PF03948 Ribosomal protein L9, C-terminal domain B856_13930 PF01084 Ribosomal protein S18 B856_13935 PF01250 Ribosomal protein S6 B856_13940 PF01040 UbiA prenyltransferase family B856_13945 PF03626 B856_13945 B856_13950 PF00510 Cytochrome c oxidase subunit III B856_13955 PF00115 Cytochrome C and Quinol oxidase polypeptide I B856_13960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain B856_13960 PF06481 COX Aromatic Rich Motif B856_13965 PF06271 B856_13965 B856_13965 PF14237 B856_13965 B856_13970 PF00391 PEP-utilising enzyme, mobile domain B856_13970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B856_13970 PF02896 PEP-utilising enzyme, TIM barrel domain B856_13975 PF03618 B856_13975 B856_13985 PF01522 Polysaccharide deacetylase B856_13985 PF14883 Hypothetical glycosyl hydrolase family 13 B856_13990 PF13641 Glycosyltransferase like family 2 B856_13995 PF13994 B856_13995 B856_14005 PF00296 Luciferase-like monooxygenase B856_14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14020 PF03466 LysR substrate binding domain B856_14025 PF17124 B856_14025 B856_14030 PF00472 RF-1 domain B856_14030 PF03462 PCRF domain B856_14035 PF05175 Methyltransferase small domain B856_14040 PF00528 Binding-protein-dependent transport system inner membrane component B856_14045 PF09084 NMT1/THI5 like B856_14050 PF12625 B856_14050 B856_14050 PF12833 Helix-turn-helix domain B856_14055 PF00106 short chain dehydrogenase B856_14060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_14060 PF02770 Acyl-CoA dehydrogenase, middle domain B856_14060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_14065 PF00501 AMP-binding enzyme B856_14065 PF13193 AMP-binding enzyme C-terminal domain B856_14070 PF01613 Flavin reductase like domain B856_14075 PF00899 ThiF family B856_14080 PF03109 B856_14080 B856_14085 PF02152 Dihydroneopterin aldolase B856_14090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B856_14095 PF03814 B856_14095 B856_14100 PF00122 E1-E2 ATPase B856_14100 PF00702 haloacid dehalogenase-like hydrolase B856_14105 PF02669 B856_14105 B856_14110 PF00512 His Kinase A (phospho-acceptor) domain B856_14110 PF00582 Universal stress protein family B856_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_14110 PF02702 Osmosensitive K+ channel His kinase sensor domain B856_14110 PF13493 Domain of unknown function (DUF4118) B856_14115 PF00072 Response regulator receiver domain B856_14115 PF00486 Transcriptional regulatory protein, C terminal B856_14120 PF00120 Glutamine synthetase, catalytic domain B856_14125 PF10973 B856_14125 B856_14130 PF03232 B856_14130 B856_14135 PF07690 Major Facilitator Superfamily B856_14140 PF01103 Surface antigen B856_14140 PF07244 Surface antigen variable number repeat B856_14140 PF17243 B856_14140 B856_14145 PF04357 B856_14145 B856_14155 PF00330 Aconitase family (aconitate hydratase) B856_14155 PF06434 Aconitate hydratase 2 N-terminus B856_14155 PF11791 Aconitate B N-terminal domain B856_14165 PF00520 Ion transport protein B856_14170 PF07690 Major Facilitator Superfamily B856_14180 PF10670 B856_14180 B856_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14185 PF03466 LysR substrate binding domain B856_14190 PF04284 B856_14190 B856_14200 PF00849 RNA pseudouridylate synthase B856_14200 PF01479 S4 domain B856_14205 PF00583 Acetyltransferase (GNAT) family B856_14210 PF04221 RelB antitoxin B856_14215 PF00849 RNA pseudouridylate synthase B856_14220 PF02367 Uncharacterised P-loop hydrolase UPF0079 B856_14225 PF01119 DNA mismatch repair protein, C-terminal domain B856_14225 PF08676 MutL C terminal dimerisation domain B856_14225 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_14230 PF01715 IPP transferase B856_14235 PF17209 B856_14235 B856_14240 PF00892 EamA-like transporter family B856_14245 PF00881 Nitroreductase family B856_14255 PF00149 Calcineurin-like phosphoesterase B856_14260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B856_14265 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_14265 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B856_14270 PF00117 Glutamine amidotransferase class-I B856_14275 PF05985 Ethanolamine ammonia-lyase light chain (EutC) B856_14280 PF06751 Ethanolamine ammonia lyase large subunit (EutB) B856_14285 PF13520 Amino acid permease B856_14290 PF00171 Aldehyde dehydrogenase family B856_14300 PF12146 Putative lysophospholipase B856_14305 PF00465 Iron-containing alcohol dehydrogenase B856_14310 PF05970 B856_14310 B856_14310 PF14493 B856_14310 B856_14315 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase B856_14320 PF06445 GyrI-like small molecule binding domain B856_14320 PF12833 Helix-turn-helix domain B856_14325 PF02110 Hydroxyethylthiazole kinase family B856_14340 PF01433 Peptidase family M1 B856_14340 PF11940 Domain of unknown function (DUF3458) B856_14340 PF17432 B856_14340 B856_14345 PF13417 Glutathione S-transferase, N-terminal domain B856_14345 PF14497 Glutathione S-transferase, C-terminal domain B856_14350 PF00106 short chain dehydrogenase B856_14355 PF01435 Peptidase family M48 B856_14365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_14365 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_14370 PF00764 Arginosuccinate synthase B856_14375 PF00990 GGDEF domain B856_14380 PF01979 Amidohydrolase family B856_14385 PF00929 Exonuclease B856_14395 PF00593 TonB dependent receptor B856_14395 PF07715 TonB-dependent Receptor Plug Domain B856_14400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B856_14405 PF00005 ABC transporter B856_14405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B856_14410 PF00528 Binding-protein-dependent transport system inner membrane component B856_14415 PF00528 Binding-protein-dependent transport system inner membrane component B856_14420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B856_14425 PF01464 Transglycosylase SLT domain B856_14425 PF01476 LysM domain B856_14430 PF00075 RNase H B856_14430 PF00929 Exonuclease B856_14440 PF00293 NUDIX domain B856_14440 PF09297 NADH pyrophosphatase zinc ribbon domain B856_14445 PF07859 alpha/beta hydrolase fold B856_14450 PF04972 BON domain B856_14455 PF02021 Uncharacterised protein family UPF0102 B856_14460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B856_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14470 PF03466 LysR substrate binding domain B856_14475 PF01810 B856_14475 B856_14480 PF01545 Cation efflux family B856_14485 PF13411 MerR HTH family regulatory protein B856_14495 PF01494 FAD binding domain B856_14500 PF01494 FAD binding domain B856_14505 PF00557 Metallopeptidase family M24 B856_14505 PF05195 Aminopeptidase P, N-terminal domain B856_14510 PF03695 Uncharacterised protein family (UPF0149) B856_14520 PF05164 Cell division protein ZapA B856_14530 PF00589 Phage integrase family B856_14530 PF13356 Domain of unknown function (DUF4102) B856_14540 PF00144 Beta-lactamase B856_14545 PF13387 B856_14545 B856_14550 PF11220 B856_14550 B856_14555 PF05675 B856_14555 B856_14560 PF01208 Uroporphyrinogen decarboxylase (URO-D) B856_14565 PF01471 Putative peptidoglycan binding domain B856_14565 PF03734 L,D-transpeptidase catalytic domain B856_14570 PF00425 chorismate binding enzyme B856_14575 PF01648 4'-phosphopantetheinyl transferase superfamily B856_14580 PF00975 Thioesterase domain B856_14585 PF00005 ABC transporter B856_14585 PF00664 ABC transporter transmembrane region B856_14590 PF00005 ABC transporter B856_14590 PF00664 ABC transporter transmembrane region B856_14600 PF00282 Pyridoxal-dependent decarboxylase conserved domain B856_14605 PF00550 Phosphopantetheine attachment site B856_14605 PF00857 Isochorismatase family B856_14610 PF00501 AMP-binding enzyme B856_14610 PF13193 AMP-binding enzyme C-terminal domain B856_14615 PF00668 Condensation domain B856_14620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) B856_14625 PF00593 TonB dependent receptor B856_14625 PF07715 TonB-dependent Receptor Plug Domain B856_14630 PF01497 Periplasmic binding protein B856_14635 PF00005 ABC transporter B856_14640 PF01032 FecCD transport family B856_14645 PF01032 FecCD transport family B856_14650 PF00550 Phosphopantetheine attachment site B856_14650 PF00668 Condensation domain B856_14655 PF00501 AMP-binding enzyme B856_14655 PF13193 AMP-binding enzyme C-terminal domain B856_14660 PF04954 Siderophore-interacting protein B856_14660 PF08021 Siderophore-interacting FAD-binding domain B856_14665 PF08348 B856_14665 B856_14665 PF13309 B856_14665 B856_14675 PF02678 Pirin B856_14685 PF00440 Bacterial regulatory proteins, tetR family B856_14695 PF00440 Bacterial regulatory proteins, tetR family B856_14700 PF00440 Bacterial regulatory proteins, tetR family B856_14705 PF00107 Zinc-binding dehydrogenase B856_14705 PF08240 Alcohol dehydrogenase GroES-like domain B856_14710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B856_14710 PF13378 Enolase C-terminal domain-like B856_14715 PF00083 Sugar (and other) transporter B856_14720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system B856_14725 PF00892 EamA-like transporter family B856_14730 PF00892 EamA-like transporter family B856_14735 PF01914 B856_14735 B856_14745 PF06249 Ethanolamine utilisation protein EutQ B856_14750 PF01266 FAD dependent oxidoreductase B856_14755 PF00301 Rubredoxin B856_14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_14760 PF00171 Aldehyde dehydrogenase family B856_14765 PF00355 Rieske [2Fe-2S] domain B856_14765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_14770 PF02028 BCCT family transporter B856_14775 PF02028 BCCT family transporter B856_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14780 PF03466 LysR substrate binding domain B856_14785 PF00324 Amino acid permease B856_14790 PF00171 Aldehyde dehydrogenase family B856_14795 PF05899 Protein of unknown function (DUF861) B856_14800 PF01266 FAD dependent oxidoreductase B856_14805 PF07905 B856_14805 B856_14805 PF13556 PucR C-terminal helix-turn-helix domain B856_14810 PF00440 Bacterial regulatory proteins, tetR family B856_14815 PF03374 B856_14815 B856_14840 PF04328 B856_14840 B856_14845 PF02554 B856_14845 B856_14845 PF13722 B856_14845 B856_14850 PF01132 Elongation factor P (EF-P) OB domain B856_14850 PF08207 Elongation factor P (EF-P) KOW-like domain B856_14850 PF09285 Elongation factor P, C-terminal B856_14855 PF04055 Radical SAM superfamily B856_14855 PF13394 4Fe-4S single cluster domain B856_14865 PF00563 EAL domain B856_14870 PF01197 Ribosomal protein L31 B856_14875 PF13593 SBF-like CPA transporter family (DUF4137) B856_14880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B856_14885 PF07690 Major Facilitator Superfamily B856_14890 PF05362 Lon protease (S16) C-terminal proteolytic domain B856_14890 PF13654 AAA domain B856_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_14895 PF03466 LysR substrate binding domain B856_14900 PF01476 LysM domain B856_14900 PF01551 Peptidase family M23 B856_14905 PF01975 Survival protein SurE B856_14920 PF00768 D-alanyl-D-alanine carboxypeptidase B856_14920 PF07943 Penicillin-binding protein 5, C-terminal domain B856_14925 PF00132 Bacterial transferase hexapeptide (six repeats) B856_14930 PF00293 NUDIX domain B856_14935 PF03054 tRNA methyl transferase B856_14940 PF04356 Protein of unknown function (DUF489) B856_14945 PF00206 Lyase B856_14945 PF08328 Adenylosuccinate lyase C-terminal B856_14950 PF09997 B856_14950 B856_14955 PF07690 Major Facilitator Superfamily B856_14960 PF00440 Bacterial regulatory proteins, tetR family B856_14960 PF02909 Tetracyclin repressor, C-terminal all-alpha domain B856_14975 PF04986 B856_14975 B856_14975 PF14319 B856_14975 B856_14985 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase B856_14990 PF01636 Phosphotransferase enzyme family B856_15000 PF01078 Magnesium chelatase, subunit ChlI B856_15000 PF13541 Subunit ChlI of Mg-chelatase B856_15005 PF04380 B856_15005 B856_15010 PF00543 Nitrogen regulatory protein P-II B856_15015 PF00909 Ammonium Transporter Family B856_15020 PF03477 ATP cone domain B856_15025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B856_15025 PF01872 RibD C-terminal domain B856_15030 PF02086 D12 class N6 adenine-specific DNA methyltransferase B856_15035 PF00677 Lumazine binding domain B856_15050 PF04364 DNA polymerase III chi subunit, HolC B856_15055 PF00883 Cytosol aminopeptidase family, catalytic domain B856_15055 PF02789 Cytosol aminopeptidase family, N-terminal domain B856_15060 PF03739 B856_15060 B856_15065 PF03739 B856_15065 B856_15070 PF01676 Metalloenzyme superfamily B856_15070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) B856_15075 PF03572 Peptidase family S41 B856_15080 PF00072 Response regulator receiver domain B856_15080 PF00158 Sigma-54 interaction domain B856_15080 PF02954 Bacterial regulatory protein, Fis family B856_15085 PF00512 His Kinase A (phospho-acceptor) domain B856_15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_15090 PF00072 Response regulator receiver domain B856_15090 PF00196 Bacterial regulatory proteins, luxR family B856_15095 PF00768 D-alanyl-D-alanine carboxypeptidase B856_15100 PF00291 Pyridoxal-phosphate dependent enzyme B856_15105 PF00742 Homoserine dehydrogenase B856_15105 PF01842 ACT domain B856_15105 PF03447 Homoserine dehydrogenase, NAD binding domain B856_15110 PF10411 Disulfide bond isomerase protein N-terminus B856_15110 PF13098 Thioredoxin-like domain B856_15115 PF00589 Phage integrase family B856_15115 PF02899 Phage integrase, N-terminal SAM-like domain B856_15120 PF04023 FeoA domain B856_15125 PF02421 Ferrous iron transport protein B B856_15125 PF07664 B856_15125 B856_15125 PF07670 Nucleoside recognition B856_15135 PF02875 Mur ligase family, glutamate ligase domain B856_15135 PF08245 Mur ligase middle domain B856_15140 PF01098 B856_15140 B856_15145 PF00749 tRNA synthetases class I (E and Q), catalytic domain B856_15150 PF01258 Prokaryotic dksA/traR C4-type zinc finger B856_15155 PF00149 Calcineurin-like phosphoesterase B856_15160 PF00293 NUDIX domain B856_15165 PF01964 ThiC family B856_15165 PF13667 ThiC-associated domain B856_15175 PF00440 Bacterial regulatory proteins, tetR family B856_15180 PF00892 EamA-like transporter family B856_15185 PF02321 Outer membrane efflux protein B856_15190 PF01895 PhoU domain B856_15195 PF04362 Bacterial Fe(2+) trafficking B856_15200 PF00206 Lyase B856_15200 PF14698 Argininosuccinate lyase C-terminal B856_15205 PF06580 B856_15205 B856_15210 PF00072 Response regulator receiver domain B856_15210 PF04397 LytTr DNA-binding domain B856_15215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B856_15215 PF03900 Porphobilinogen deaminase, C-terminal domain B856_15220 PF02602 Uroporphyrinogen-III synthase HemD B856_15235 PF13279 Thioesterase-like superfamily B856_15240 PF00816 H-NS histone family B856_15245 PF01203 B856_15245 B856_15250 PF11356 Type IV pilus biogenesis B856_15255 PF00263 B856_15255 B856_15255 PF03958 Bacterial type II/III secretion system short domain B856_15260 PF00498 FHA domain B856_15265 PF13419 Haloacid dehalogenase-like hydrolase B856_15270 PF00425 chorismate binding enzyme B856_15270 PF04715 Anthranilate synthase component I, N terminal region B856_15300 PF00474 Sodium:solute symporter family B856_15305 PF01037 AsnC family B856_15305 PF13404 AsnC-type helix-turn-helix domain B856_15310 PF00171 Aldehyde dehydrogenase family B856_15310 PF01619 Proline dehydrogenase B856_15310 PF14850 DNA-binding domain of Proline dehydrogenase B856_15315 PF04229 GrpB protein B856_15320 PF05958 tRNA (Uracil-5-)-methyltransferase B856_15330 PF09992 Predicted periplasmic protein (DUF2233) B856_15335 PF04970 Lecithin retinol acyltransferase B856_15340 PF04264 YceI-like domain B856_15345 PF02566 OsmC-like protein B856_15350 PF00456 Transketolase, thiamine diphosphate binding domain B856_15350 PF02779 Transketolase, pyrimidine binding domain B856_15350 PF02780 Transketolase, C-terminal domain B856_15355 PF00438 S-adenosylmethionine synthetase, N-terminal domain B856_15355 PF02772 S-adenosylmethionine synthetase, central domain B856_15355 PF02773 S-adenosylmethionine synthetase, C-terminal domain B856_15370 PF04186 B856_15370 B856_15375 PF00905 Penicillin binding protein transpeptidase domain B856_15380 PF13420 Acetyltransferase (GNAT) domain B856_15385 PF01381 Helix-turn-helix B856_15390 PF02075 Crossover junction endodeoxyribonuclease RuvC B856_15395 PF01256 Carbohydrate kinase B856_15395 PF03853 YjeF-related protein N-terminus B856_15400 PF08331 B856_15400 B856_15400 PF13484 B856_15400 B856_15405 PF04055 Radical SAM superfamily B856_15405 PF06968 Biotin and Thiamin Synthesis associated domain B856_15420 PF16970 B856_15420 B856_15425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain B856_15425 PF02753 Pili assembly chaperone PapD, C-terminal domain B856_15430 PF00577 Outer membrane usher protein B856_15430 PF13953 PapC C-terminal domain B856_15430 PF13954 PapC N-terminal domain B856_15435 PF00419 Fimbrial protein B856_15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_15445 PF03466 LysR substrate binding domain B856_15450 PF00892 EamA-like transporter family B856_15460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_15465 PF05232 B856_15465 B856_15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_15470 PF03466 LysR substrate binding domain B856_15480 PF00589 Phage integrase family B856_15480 PF13356 Domain of unknown function (DUF4102) B856_15495 PF00440 Bacterial regulatory proteins, tetR family B856_15500 PF01553 Acyltransferase B856_15505 PF01709 Transcriptional regulator B856_15510 PF01037 AsnC family B856_15510 PF13412 Winged helix-turn-helix DNA-binding B856_15520 PF00005 ABC transporter B856_15525 PF00528 Binding-protein-dependent transport system inner membrane component B856_15530 PF00528 Binding-protein-dependent transport system inner membrane component B856_15535 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_15540 PF13417 Glutathione S-transferase, N-terminal domain B856_15540 PF14497 Glutathione S-transferase, C-terminal domain B856_15545 PF02770 Acyl-CoA dehydrogenase, middle domain B856_15545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_15545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_15550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_15550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_15555 PF00296 Luciferase-like monooxygenase B856_15560 PF03180 NLPA lipoprotein B856_15565 PF03180 NLPA lipoprotein B856_15570 PF00005 ABC transporter B856_15570 PF09383 NIL domain B856_15575 PF00528 Binding-protein-dependent transport system inner membrane component B856_15580 PF01926 50S ribosome-binding GTPase B856_15580 PF06071 Protein of unknown function (DUF933) B856_15585 PF06127 B856_15585 B856_15590 PF00027 Cyclic nucleotide-binding domain B856_15590 PF13545 Crp-like helix-turn-helix domain B856_15605 PF03591 B856_15605 B856_15610 PF05437 B856_15610 B856_15615 PF14552 Tautomerase enzyme B856_15620 PF02222 ATP-grasp domain B856_15625 PF01909 Nucleotidyltransferase domain B856_15625 PF01966 HD domain B856_15625 PF08335 GlnD PII-uridylyltransferase B856_15630 PF00155 Aminotransferase class I and II B856_15635 PF01810 B856_15635 B856_15640 PF02311 AraC-like ligand binding domain B856_15640 PF12833 Helix-turn-helix domain B856_15645 PF00255 Glutathione peroxidase B856_15650 PF01641 SelR domain B856_15655 PF00155 Aminotransferase class I and II B856_15660 PF00375 Sodium:dicarboxylate symporter family B856_15665 PF00710 Asparaginase B856_15670 PF02811 PHP domain B856_15670 PF07733 Bacterial DNA polymerase III alpha subunit B856_15670 PF14579 Helix-hairpin-helix motif B856_15675 PF00588 SpoU rRNA Methylase family B856_15680 PF00132 Bacterial transferase hexapeptide (six repeats) B856_15680 PF06426 Serine acetyltransferase, N-terminal B856_15695 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_15705 PF01066 CDP-alcohol phosphatidyltransferase B856_15710 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ B856_15715 PF13640 2OG-Fe(II) oxygenase superfamily B856_15725 PF10982 Protein of unknown function (DUF2789) B856_15730 PF00056 lactate/malate dehydrogenase, NAD binding domain B856_15730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B856_15735 PF00445 Ribonuclease T2 family B856_15740 PF01464 Transglycosylase SLT domain B856_15745 PF00919 Uncharacterized protein family UPF0004 B856_15745 PF01938 TRAM domain B856_15745 PF04055 Radical SAM superfamily B856_15750 PF02562 PhoH-like protein B856_15755 PF02130 Uncharacterized protein family UPF0054 B856_15760 PF03544 Gram-negative bacterial TonB protein C-terminal B856_15770 PF11306 Protein of unknown function (DUF3108) B856_15780 PF03358 NADPH-dependent FMN reductase B856_15785 PF03631 B856_15785 B856_15790 PF00892 EamA-like transporter family B856_15795 PF02311 AraC-like ligand binding domain B856_15795 PF12833 Helix-turn-helix domain B856_15800 PF01557 Fumarylacetoacetate (FAA) hydrolase family B856_15810 PF00881 Nitroreductase family B856_15855 PF02530 B856_15855 B856_15865 PF13000 B856_15865 B856_15870 PF01553 Acyltransferase B856_15875 PF01734 Patatin-like phospholipase B856_15880 PF01957 NfeD-like C-terminal, partner-binding B856_15885 PF01145 SPFH domain / Band 7 family B856_15890 PF04237 YjbR B856_15895 PF00348 Polyprenyl synthetase B856_15900 PF04303 PrpF protein B856_15905 PF00324 Amino acid permease B856_15915 PF01965 DJ-1/PfpI family B856_15920 PF00107 Zinc-binding dehydrogenase B856_15920 PF08240 Alcohol dehydrogenase GroES-like domain B856_15925 PF06719 B856_15925 B856_15925 PF12833 Helix-turn-helix domain B856_15930 PF02673 B856_15930 B856_15935 PF08223 PaaX-like protein C-terminal domain B856_15940 PF00487 B856_15940 B856_15945 PF12625 B856_15945 B856_15945 PF12833 Helix-turn-helix domain B856_15955 PF02525 Flavodoxin-like fold B856_15960 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B856_15965 PF12710 haloacid dehalogenase-like hydrolase B856_15970 PF01507 Phosphoadenosine phosphosulfate reductase family B856_15975 PF03007 B856_15975 B856_15975 PF06974 B856_15975 B856_15985 PF00575 S1 RNA binding domain B856_15985 PF10150 Ribonuclease E/G family B856_15990 PF02545 Maf-like protein B856_15995 PF04093 B856_15995 B856_16000 PF04085 rod shape-determining protein MreC B856_16005 PF06723 MreB/Mbl protein B856_16010 PF02686 Glu-tRNAGln amidotransferase C subunit B856_16015 PF01425 Amidase B856_16020 PF02637 GatB domain B856_16020 PF02934 GatB/GatE catalytic domain B856_16030 PF05621 B856_16030 B856_16035 PF00665 Integrase core domain B856_16035 PF09299 Mu transposase, C-terminal B856_16040 PF08721 TnsA endonuclease C terminal B856_16040 PF08722 TnsA endonuclease N terminal B856_16045 PF02417 B856_16045 B856_16050 PF02417 B856_16050 B856_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16055 PF03466 LysR substrate binding domain B856_16060 PF01758 Sodium Bile acid symporter family B856_16065 PF01022 Bacterial regulatory protein, arsR family B856_16070 PF03960 ArsC family B856_16080 PF07969 Amidohydrolase family B856_16085 PF00857 Isochorismatase family B856_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16090 PF03466 LysR substrate binding domain B856_16095 PF00392 Bacterial regulatory proteins, gntR family B856_16095 PF07729 FCD domain B856_16100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin B856_16105 PF01177 Asp/Glu/Hydantoin racemase B856_16110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family B856_16115 PF00528 Binding-protein-dependent transport system inner membrane component B856_16120 PF00005 ABC transporter B856_16125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B856_16135 PF00083 Sugar (and other) transporter B856_16140 PF00296 Luciferase-like monooxygenase B856_16145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain B856_16155 PF01654 B856_16155 B856_16160 PF02322 B856_16160 B856_16170 PF00155 Aminotransferase class I and II B856_16170 PF00392 Bacterial regulatory proteins, gntR family B856_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16175 PF03466 LysR substrate binding domain B856_16180 PF03818 B856_16180 B856_16185 PF03817 B856_16185 B856_16190 PF00698 Acyl transferase domain B856_16195 PF10620 B856_16195 B856_16200 PF06833 Malonate decarboxylase gamma subunit (MdcE) B856_16205 PF01039 Carboxyl transferase domain B856_16210 PF06857 B856_16210 B856_16215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase B856_16220 PF16957 B856_16220 B856_16230 PF07690 Major Facilitator Superfamily B856_16235 PF13302 Acetyltransferase (GNAT) domain B856_16240 PF04299 Putative FMN-binding domain B856_16245 PF00155 Aminotransferase class I and II B856_16245 PF00392 Bacterial regulatory proteins, gntR family B856_16250 PF04172 B856_16250 B856_16255 PF03788 B856_16255 B856_16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16260 PF03466 LysR substrate binding domain B856_16265 PF13417 Glutathione S-transferase, N-terminal domain B856_16265 PF14834 Glutathione S-transferase, C-terminal domain B856_16270 PF00043 Glutathione S-transferase, C-terminal domain B856_16270 PF02798 Glutathione S-transferase, N-terminal domain B856_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16275 PF03466 LysR substrate binding domain B856_16285 PF13561 Enoyl-(Acyl carrier protein) reductase B856_16290 PF00581 Rhodanese-like domain B856_16295 PF00132 Bacterial transferase hexapeptide (six repeats) B856_16295 PF06426 Serine acetyltransferase, N-terminal B856_16305 PF00266 Aminotransferase class-V B856_16310 PF01810 B856_16310 B856_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_16315 PF03466 LysR substrate binding domain B856_16320 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_16325 PF00497 Bacterial extracellular solute-binding proteins, family 3 B856_16330 PF00005 ABC transporter B856_16335 PF00528 Binding-protein-dependent transport system inner membrane component B856_16340 PF00528 Binding-protein-dependent transport system inner membrane component B856_16345 PF14542 GCN5-related N-acetyl-transferase B856_16350 PF00072 Response regulator receiver domain B856_16350 PF00196 Bacterial regulatory proteins, luxR family B856_16355 PF00072 Response regulator receiver domain B856_16355 PF00512 His Kinase A (phospho-acceptor) domain B856_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B856_16365 PF01037 AsnC family B856_16365 PF13412 Winged helix-turn-helix DNA-binding B856_16370 PF01810 B856_16370 B856_16375 PF00717 Peptidase S24-like B856_16390 PF02698 DUF218 domain B856_16395 PF00175 Oxidoreductase NAD-binding domain B856_16395 PF00258 Flavodoxin B856_16395 PF03929 B856_16395 B856_16400 PF14317 B856_16400 B856_16405 PF12805 B856_16405 B856_16405 PF13515 B856_16405 B856_16410 PF07690 Major Facilitator Superfamily B856_16415 PF00881 Nitroreductase family B856_16430 PF01235 B856_16430 B856_16435 PF01734 Patatin-like phospholipase B856_16440 PF00291 Pyridoxal-phosphate dependent enzyme B856_16445 PF05992 B856_16445 B856_16450 PF16142 B856_16450 B856_16455 PF06674 B856_16455 B856_16465 PF01965 DJ-1/PfpI family B856_16475 PF13689 B856_16475 B856_16480 PF00990 GGDEF domain B856_16480 PF17152 B856_16480 B856_16485 PF00691 OmpA family B856_16490 PF00149 Calcineurin-like phosphoesterase B856_16495 PF13091 PLD-like domain B856_16500 PF01553 Acyltransferase B856_16505 PF01926 50S ribosome-binding GTPase B856_16505 PF13167 B856_16505 B856_16505 PF16360 B856_16505 B856_16515 PF04172 B856_16515 B856_16520 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) B856_16525 PF00149 Calcineurin-like phosphoesterase B856_16530 PF00398 Ribosomal RNA adenine dimethylase B856_16535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA B856_16540 PF00572 Ribosomal protein L13 B856_16545 PF00380 Ribosomal protein S9/S16 B856_16550 PF02798 Glutathione S-transferase, N-terminal domain B856_16555 PF04386 Stringent starvation protein B B856_16565 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B856_16565 PF00364 Biotin-requiring enzyme B856_16565 PF02785 Biotin carboxylase C-terminal domain B856_16565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_16570 PF00378 Enoyl-CoA hydratase/isomerase family B856_16575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_16575 PF02770 Acyl-CoA dehydrogenase, middle domain B856_16575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_16580 PF01039 Carboxyl transferase domain B856_16585 PF13561 Enoyl-(Acyl carrier protein) reductase B856_16590 PF07287 B856_16590 B856_16595 PF00440 Bacterial regulatory proteins, tetR family B856_16600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_16600 PF02770 Acyl-CoA dehydrogenase, middle domain B856_16600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_16605 PF14066 B856_16605 B856_16610 PF09413 Domain of unknown function (DUF2007) B856_16615 PF13527 Acetyltransferase (GNAT) domain B856_16620 PF00291 Pyridoxal-phosphate dependent enzyme B856_16625 PF01464 Transglycosylase SLT domain B856_16630 PF03358 NADPH-dependent FMN reductase B856_16635 PF11158 B856_16635 B856_16640 PF13411 MerR HTH family regulatory protein B856_16645 PF13449 Esterase-like activity of phytase B856_16650 PF04055 Radical SAM superfamily B856_16650 PF08497 B856_16650 B856_16650 PF11842 B856_16650 B856_16655 PF10881 B856_16655 B856_16660 PF01042 Endoribonuclease L-PSP B856_16665 PF00817 impB/mucB/samB family B856_16665 PF11798 IMS family HHH motif B856_16665 PF11799 impB/mucB/samB family C-terminal domain B856_16670 PF01183 Glycosyl hydrolases family 25 B856_16675 PF07690 Major Facilitator Superfamily B856_16680 PF03641 Possible lysine decarboxylase B856_16685 PF00571 CBS domain B856_16685 PF03471 Transporter associated domain B856_16685 PF03741 B856_16685 B856_16690 PF02810 SEC-C motif B856_16695 PF03458 B856_16695 B856_16700 PF00083 Sugar (and other) transporter B856_16705 PF00521 DNA gyrase/topoisomerase IV, subunit A B856_16705 PF03989 DNA gyrase C-terminal domain, beta-propeller B856_16710 PF00501 AMP-binding enzyme B856_16710 PF13193 AMP-binding enzyme C-terminal domain B856_16720 PF01124 MAPEG family B856_16725 PF00719 Inorganic pyrophosphatase B856_16730 PF03573 outer membrane porin, OprD family B856_16740 PF09694 B856_16740 B856_16745 PF00701 Dihydrodipicolinate synthetase family B856_16750 PF00596 Class II Aldolase and Adducin N-terminal domain B856_16775 PF00293 NUDIX domain B856_16775 PF14803 Nudix N-terminal B856_16780 PF00293 NUDIX domain B856_16785 PF00132 Bacterial transferase hexapeptide (six repeats) B856_16790 PF00814 Glycoprotease family B856_16795 PF04445 Putative SAM-dependent methyltransferase B856_16800 PF01650 Peptidase C13 family B856_16805 PF00756 Putative esterase B856_16810 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) B856_16815 PF00834 Ribulose-phosphate 3 epimerase family B856_16820 PF08282 haloacid dehalogenase-like hydrolase B856_16830 PF00394 Multicopper oxidase B856_16830 PF07731 Multicopper oxidase B856_16830 PF07732 Multicopper oxidase B856_16835 PF05275 B856_16835 B856_16840 PF01545 Cation efflux family B856_16845 PF00893 Small Multidrug Resistance protein B856_16850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_16850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B856_16855 PF01960 ArgJ family B856_16860 PF02445 Quinolinate synthetase A protein B856_16895 PF05838 Glycosyl hydrolase 108 B856_16895 PF09374 Predicted Peptidoglycan domain B856_16900 PF00593 TonB dependent receptor B856_16900 PF07715 TonB-dependent Receptor Plug Domain B856_16905 PF08019 B856_16905 B856_16915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain B856_16915 PF02753 Pili assembly chaperone PapD, C-terminal domain B856_16920 PF00577 Outer membrane usher protein B856_16920 PF13953 PapC C-terminal domain B856_16920 PF13954 PapC N-terminal domain B856_16925 PF00419 Fimbrial protein B856_16930 PF16223 B856_16930 B856_16935 PF00107 Zinc-binding dehydrogenase B856_16935 PF08240 Alcohol dehydrogenase GroES-like domain B856_16945 PF00199 Catalase B856_16965 PF13091 PLD-like domain B856_16985 PF01244 Membrane dipeptidase (Peptidase family M19) B856_16990 PF04055 Radical SAM superfamily B856_16990 PF13186 Iron-sulfur cluster-binding domain B856_16990 PF13353 4Fe-4S single cluster domain B856_16995 PF05402 Coenzyme PQQ synthesis protein D (PqqD) B856_17000 PF03070 TENA/THI-4/PQQC family B856_17005 PF12706 Beta-lactamase superfamily domain B856_17010 PF02503 Polyphosphate kinase middle domain B856_17010 PF13089 Polyphosphate kinase N-terminal domain B856_17010 PF13090 Polyphosphate kinase C-terminal domain B856_17020 PF01475 Ferric uptake regulator family B856_17025 PF00857 Isochorismatase family B856_17030 PF13561 Enoyl-(Acyl carrier protein) reductase B856_17035 PF00005 ABC transporter B856_17040 PF00528 Binding-protein-dependent transport system inner membrane component B856_17045 PF13531 Bacterial extracellular solute-binding protein B856_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17055 PF00355 Rieske [2Fe-2S] domain B856_17055 PF00848 Ring hydroxylating alpha subunit (catalytic domain) B856_17060 PF00866 Ring hydroxylating beta subunit B856_17065 PF00111 2Fe-2S iron-sulfur cluster binding domain B856_17065 PF00175 Oxidoreductase NAD-binding domain B856_17065 PF00970 Oxidoreductase FAD-binding domain B856_17070 PF12833 Helix-turn-helix domain B856_17070 PF14525 B856_17070 B856_17075 PF13557 B856_17075 B856_17080 PF01613 Flavin reductase like domain B856_17090 PF13561 Enoyl-(Acyl carrier protein) reductase B856_17095 PF01738 Dienelactone hydrolase family B856_17105 PF12833 Helix-turn-helix domain B856_17105 PF14525 B856_17105 B856_17110 PF00027 Cyclic nucleotide-binding domain B856_17110 PF00325 Bacterial regulatory proteins, crp family B856_17115 PF02566 OsmC-like protein B856_17120 PF00583 Acetyltransferase (GNAT) family B856_17125 PF01551 Peptidase family M23 B856_17130 PF00004 ATPase family associated with various cellular activities (AAA) B856_17130 PF02861 Clp amino terminal domain B856_17130 PF07724 AAA domain (Cdc48 subfamily) B856_17130 PF10431 C-terminal, D2-small domain, of ClpB protein B856_17135 PF02464 Competence-damaged protein B856_17145 PF01170 Putative RNA methylase family UPF0020 B856_17145 PF02926 THUMP domain B856_17145 PF10672 S-adenosylmethionine-dependent methyltransferase B856_17155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B856_17155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B856_17165 PF00691 OmpA family B856_17170 PF03807 NADP oxidoreductase coenzyme F420-dependent B856_17170 PF10728 Domain of unknown function (DUF2520) B856_17175 PF00043 Glutathione S-transferase, C-terminal domain B856_17175 PF02798 Glutathione S-transferase, N-terminal domain B856_17180 PF02390 Putative methyltransferase B856_17185 PF00932 Lamin Tail Domain B856_17190 PF00043 Glutathione S-transferase, C-terminal domain B856_17190 PF02798 Glutathione S-transferase, N-terminal domain B856_17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_17205 PF13192 Thioredoxin domain B856_17210 PF00149 Calcineurin-like phosphoesterase B856_17215 PF00781 Diacylglycerol kinase catalytic domain B856_17220 PF00821 Phosphoenolpyruvate carboxykinase B856_17220 PF17297 B856_17220 B856_17225 PF01266 FAD dependent oxidoreductase B856_17225 PF16901 B856_17225 B856_17230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B856_17230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B856_17235 PF00083 Sugar (and other) transporter B856_17245 PF06325 Ribosomal protein L11 methyltransferase (PrmA) B856_17250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B856_17250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B856_17265 PF09423 PhoD-like phosphatase B856_17265 PF16655 B856_17265 B856_17285 PF00809 Pterin binding enzyme B856_17290 PF00004 ATPase family associated with various cellular activities (AAA) B856_17290 PF01434 Peptidase family M41 B856_17290 PF06480 FtsH Extracellular B856_17295 PF01728 FtsJ-like methyltransferase B856_17300 PF01985 CRS1 / YhbY (CRM) domain B856_17315 PF00117 Glutamine amidotransferase class-I B856_17315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B856_17320 PF02142 MGS-like domain B856_17320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B856_17320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B856_17325 PF01272 Transcription elongation factor, GreA/GreB, C-term B856_17325 PF03449 Transcription elongation factor, N-terminal B856_17330 PF00132 Bacterial transferase hexapeptide (six repeats) B856_17335 PF00582 Universal stress protein family B856_17340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B856_17350 PF09587 Bacterial capsule synthesis protein PGA_cap B856_17365 PF01381 Helix-turn-helix B856_17370 PF14549 DNA-binding transcriptional regulator Cro B856_17385 PF01555 DNA methylase B856_17390 PF07120 B856_17390 B856_17415 PF04480 Protein of unknown function (DUF559) B856_17445 PF00962 Adenosine/AMP deaminase B856_17450 PF00107 Zinc-binding dehydrogenase B856_17450 PF08240 Alcohol dehydrogenase GroES-like domain B856_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17455 PF03466 LysR substrate binding domain B856_17460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B856_17460 PF02770 Acyl-CoA dehydrogenase, middle domain B856_17460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B856_17465 PF07690 Major Facilitator Superfamily B856_17470 PF02515 CoA-transferase family III B856_17480 PF00890 FAD binding domain B856_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17485 PF03466 LysR substrate binding domain B856_17490 PF13531 Bacterial extracellular solute-binding protein B856_17495 PF07690 Major Facilitator Superfamily B856_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17500 PF03466 LysR substrate binding domain B856_17510 PF01546 Peptidase family M20/M25/M40 B856_17510 PF07687 Peptidase dimerisation domain B856_17515 PF12625 B856_17515 B856_17515 PF12833 Helix-turn-helix domain B856_17525 PF01810 B856_17525 B856_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17530 PF03466 LysR substrate binding domain B856_17535 PF08908 B856_17535 B856_17540 PF01717 Cobalamin-independent synthase, Catalytic domain B856_17545 PF01613 Flavin reductase like domain B856_17550 PF00440 Bacterial regulatory proteins, tetR family B856_17560 PF04471 Restriction endonuclease B856_17560 PF13401 AAA domain B856_17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17570 PF03466 LysR substrate binding domain B856_17575 PF02567 Phenazine biosynthesis-like protein B856_17590 PF00905 Penicillin binding protein transpeptidase domain B856_17595 PF05673 Protein of unknown function (DUF815) B856_17610 PF01507 Phosphoadenosine phosphosulfate reductase family B856_17615 PF00009 Elongation factor Tu GTP binding domain B856_17620 PF09998 B856_17620 B856_17630 PF03600 Citrate transporter B856_17640 PF00571 CBS domain B856_17640 PF01595 B856_17640 B856_17640 PF03471 Transporter associated domain B856_17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B856_17645 PF03466 LysR substrate binding domain B856_17650 PF00463 Isocitrate lyase family B856_17655 PF04170 NlpE N-terminal domain B856_17670 PF01774 UreD urease accessory protein B856_17675 PF00547 Urease, gamma subunit B856_17680 PF00699 Urease beta subunit B856_17685 PF00449 Urease alpha-subunit, N-terminal domain B856_17685 PF01979 Amidohydrolase family B856_17690 PF02814 UreE urease accessory protein, N-terminal domain B856_17690 PF05194 UreE urease accessory protein, C-terminal domain B856_17695 PF01730 UreF B856_17700 PF02492 CobW/HypB/UreG, nucleotide-binding domain B856_17705 PF04955 B856_17705 B856_17710 PF03602 Conserved hypothetical protein 95 B856_17715 PF00905 Penicillin binding protein transpeptidase domain B856_17715 PF03717 Penicillin-binding Protein dimerisation domain B856_17730 PF00406 Adenylate kinase B856_17730 PF05191 Adenylate kinase, active site lid B856_17740 PF00633 Helix-hairpin-helix motif B856_17740 PF00730 HhH-GPD superfamily base excision DNA repair protein B856_17740 PF10576 Iron-sulfur binding domain of endonuclease III B856_17745 PF04060 Putative Fe-S cluster B856_17745 PF14697 4Fe-4S dicluster domain B856_17750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_17750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B856_17755 PF03724 META domain B856_17755 PF14302 B856_17755 B856_17760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase B856_17765 PF02590 Predicted SPOUT methyltransferase B856_17770 PF00004 ATPase family associated with various cellular activities (AAA) B856_17770 PF02190 ATP-dependent protease La (LON) domain B856_17770 PF05362 Lon protease (S16) C-terminal proteolytic domain B856_17775 PF05658 Head domain of trimeric autotransporter adhesin B856_17775 PF05662 Coiled stalk of trimeric autotransporter adhesin B856_17775 PF13018 B856_17775 B856_17780 PF04333 B856_17780 B856_17785 PF07228 Stage II sporulation protein E (SpoIIE) B856_17790 PF01740 STAS domain B856_17795 PF00795 Carbon-nitrogen hydrolase B856_17800 PF16309 B856_17800 B856_17805 PF01047 MarR family B856_17810 PF02566 OsmC-like protein B856_17815 PF00437 Type II/IV secretion system protein B856_17825 PF00924 Mechanosensitive ion channel B856_17830 PF10101 B856_17830 B856_17850 PF12844 Helix-turn-helix domain B856_17855 PF14076 B856_17855 B856_17915 PF01812 5-formyltetrahydrofolate cyclo-ligase family B856_17920 PF00691 OmpA family B856_17920 PF04355 SmpA / OmlA family B856_17925 PF03895 YadA-like C-terminal region B856_17925 PF05662 Coiled stalk of trimeric autotransporter adhesin B856_17930 PF00440 Bacterial regulatory proteins, tetR family B856_17935 PF02678 Pirin B856_17940 PF10118 B856_17940 B856_17945 PF00106 short chain dehydrogenase B856_17950 PF13738 Pyridine nucleotide-disulphide oxidoreductase B856_17960 PF00860 Permease family B856_17965 PF00962 Adenosine/AMP deaminase B856_17970 PF01292 Prokaryotic cytochrome b561 B856_17980 PF01351 Ribonuclease HII B856_17985 PF02599 Global regulator protein family B856_17990 PF00696 Amino acid kinase family B856_17990 PF01842 ACT domain B856_17990 PF13840 ACT domain B856_17995 PF01411 tRNA synthetases class II (A) B856_17995 PF02272 DHHA1 domain B856_17995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B856_18000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_18000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B856_18005 PF13393 Histidyl-tRNA synthetase B856_18010 PF00709 Adenylosuccinate synthetase B856_18020 PF01435 Peptidase family M48 B856_18025 PF00248 Aldo/keto reductase family B856_18035 PF00309 B856_18035 B856_18035 PF04552 Sigma-54, DNA binding domain B856_18035 PF04963 Sigma-54 factor, core binding domain B856_18040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B856_18045 PF01722 BolA-like protein B856_18050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B856_18055 PF01634 ATP phosphoribosyltransferase B856_18060 PF00815 Histidinol dehydrogenase B856_18065 PF00155 Aminotransferase class I and II B856_18070 PF00425 chorismate binding enzyme B856_18070 PF04715 Anthranilate synthase component I, N terminal region B856_18090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B856_18095 PF10118 B856_18095 B856_18100 PF10118 B856_18100 B856_18105 PF00583 Acetyltransferase (GNAT) family B856_18110 PF04376 B856_18110 B856_18110 PF04377 B856_18110 B856_18115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase B856_18120 PF07992 Pyridine nucleotide-disulphide oxidoreductase B856_18125 PF01580 FtsK/SpoIIIE family B856_18125 PF09397 Ftsk gamma domain B856_18125 PF13491 B856_18125 B856_18130 PF01810 B856_18130 B856_18165 PF00582 Universal stress protein family B856_18170 PF00916 B856_18170 B856_18170 PF01740 STAS domain B856_18190 PF08875 B856_18190 B856_18240 PF13479 B856_18240 B856_18245 PF13479 B856_18245 B856_18260 PF02384 N-6 DNA Methylase B856_18280 PF12686 B856_18280 B856_18285 PF10543 B856_18285 B856_18295 PF14730 Domain of unknown function (DUF4468) with TBP-like fold B856_18310 PF00872 B856_18310 B856_18315 PF01713 Smr domain B856_18320 PF02625 XdhC and CoxI family B856_18320 PF13478 XdhC Rossmann domain B856_18325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B856_18325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase B856_18330 PF00941 FAD binding domain in molybdopterin dehydrogenase B856_18330 PF01799 [2Fe-2S] binding domain B856_18330 PF03450 CO dehydrogenase flavoprotein C-terminal domain B856_18335 PF01227 GTP cyclohydrolase I B856_18345 PF00106 short chain dehydrogenase B856_18350 PF01817 Chorismate mutase type II B856_18355 PF01037 AsnC family B856_18355 PF13412 Winged helix-turn-helix DNA-binding B856_18365 PF00440 Bacterial regulatory proteins, tetR family B856_18370 PF00593 TonB dependent receptor B856_18370 PF07715 TonB-dependent Receptor Plug Domain B856_18375 PF00924 Mechanosensitive ion channel B856_18400 PF13527 Acetyltransferase (GNAT) domain B856_18405 PF00375 Sodium:dicarboxylate symporter family B856_18410 PF00440 Bacterial regulatory proteins, tetR family B856_18410 PF16859 B856_18410 B856_18415 PF07690 Major Facilitator Superfamily B856_18420 PF00375 Sodium:dicarboxylate symporter family B856_18425 PF06912 B856_18425 B856_18430 PF09831 B856_18430 B856_18435 PF00005 ABC transporter B856_18435 PF00664 ABC transporter transmembrane region B856_18440 PF01575 MaoC like domain B856_18445 PF12625 B856_18445 B856_18445 PF12833 Helix-turn-helix domain B856_18450 PF01597 Glycine cleavage H-protein B856_18455 PF02146 Sir2 family B856_18460 PF02304 Scaffold protein B B856_18465 PF12025 B856_18465 B856_18475 PF13354 Beta-lactamase enzyme family B856_18480 PF00239 Resolvase, N terminal domain B856_18480 PF02796 Helix-turn-helix domain of resolvase B856_18485 PF00171 Aldehyde dehydrogenase family B856_18535 PF10412 Type IV secretion-system coupling protein DNA-binding domain B856_18540 PF08751 TrwC relaxase B856_18540 PF13604 AAA domain B856_18585 PF05973 B856_18585 B856_18590 PF13744 Helix-turn-helix domain B856_18630 PF00239 Resolvase, N terminal domain B856_18645 PF01464 Transglycosylase SLT domain B856_18660 PF07178 B856_18660 B856_18665 PF05309 B856_18665 B856_18670 PF06586 B856_18670 B856_18675 PF03743 Bacterial conjugation TrbI-like protein B856_18680 PF10411 Disulfide bond isomerase protein N-terminus B856_18680 PF13098 Thioredoxin-like domain B856_18690 PF09676 B856_18690 B856_18695 PF11130 B856_18695 B856_18695 PF12846 AAA-like domain B856_18705 PF10502 Signal peptidase, peptidase S26 B856_18715 PF06834 B856_18715 B856_18720 PF09673 B856_18720 B856_18725 PF06986 B856_18725 B856_18730 PF13728 F plasmid transfer operon protein B856_18740 PF06122 B856_18740 B856_18745 PF07916 B856_18745 B856_18750 PF01464 Transglycosylase SLT domain B856_18760 PF00817 impB/mucB/samB family B856_18760 PF11799 impB/mucB/samB family C-terminal domain B856_18760 PF13438 B856_18760 B856_18780 PF03090 B856_18780 B856_18780 PF08708 Primase C terminal 1 (PriCT-1) B856_18790 PF06414 Zeta toxin B856_18795 PF06666 B856_18795 B856_18835 PF00565 Staphylococcal nuclease homologue B856_18845 PF00816 H-NS histone family B856_18870 PF10979 B856_18870 B856_18900 PF13614 AAA domain B856_18905 PF02195 ParB-like nuclease domain B856_18905 PF08535 KorB domain B856_18925 PF05816 B856_18925 B856_18935 PF03050 B856_18935 B856_18935 PF13005 B856_18935 B856_18935 PF13007 B856_18935 B856_18935 PF13817 B856_18935 B856_18940 PF05717 B856_18940 B856_18945 PF01527 Transposase B856_19025 PF00593 TonB dependent receptor B856_19025 PF07715 TonB-dependent Receptor Plug Domain B856_19030 PF14384 B856_19030 B856_19035 PF04365 Protein of unknown function (DUF497) B856_19040 PF08238 Sel1 repeat B856_19055 PF01051 Initiator Replication protein B856_19060 PF01609 Transposase DDE domain B856_19065 PF07091 Ribosomal RNA methyltransferase (FmrO) B856_19075 PF01609 Transposase DDE domain B856_19080 PF00005 ABC transporter B856_19080 PF12848 ABC transporter B856_19085 PF01636 Phosphotransferase enzyme family B856_19095 PF03050 B856_19095 B856_19095 PF13005 B856_19095 B856_19095 PF13007 B856_19095 B856_19095 PF13817 B856_19095 B856_19100 PF05717 B856_19100 B856_19125 PF01526 B856_19125 B856_19125 PF13700 B856_19125 B856_19130 PF13610 B856_19130 B856_19135 PF01636 Phosphotransferase enzyme family