B856_00095 SM00271 DnaJ molecular chaperone homology domain B856_00135 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_00140 SM00829 Enoylreductase B856_00160 SM00478 endonuclease III B856_00160 SM00525 B856_00160 B856_00190 SM00382 ATPases associated with a variety of cellular activities B856_00220 SM01130 B856_00220 B856_00250 SM00346 helix_turn_helix isocitrate lyase regulation B856_00280 SM00833 Cobalamin synthesis protein cobW C-terminal domain B856_00290 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_00290 SM00866 B856_00290 B856_00405 SM00450 Rhodanese Homology Domain B856_00435 SM00387 Histidine kinase-like ATPases B856_00435 SM00388 His Kinase A (phosphoacceptor) domain B856_00440 SM00448 cheY-homologous receiver domain B856_00440 SM00862 Transcriptional regulatory protein, C terminal B856_00495 SM00257 Lysin motif B856_00515 SM00387 Histidine kinase-like ATPases B856_00515 SM00433 TopoisomeraseII B856_00590 SM00267 diguanylate cyclase B856_00655 SM00842 Cell division protein FtsA B856_00660 SM00864 Tubulin/FtsZ family, GTPase domain B856_00660 SM00865 Tubulin/FtsZ family, C-terminal domain B856_00705 SM00849 Metallo-beta-lactamase superfamily B856_00715 SM00116 Domain in cystathionine beta-synthase and other proteins. B856_00715 SM01240 B856_00715 B856_00740 SM00937 B856_00740 B856_00745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B856_00785 SM00344 helix_turn_helix ASNC type B856_00845 SM01034 Sensors of blue-light using FAD B856_00860 SM00342 helix_turn_helix, arabinose operon control protein B856_00880 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_00880 SM00895 B856_00880 B856_00895 SM00972 Spore Coat Protein U domain B856_00920 SM00972 Spore Coat Protein U domain B856_00995 SM00382 ATPases associated with a variety of cellular activities B856_01025 SM00344 helix_turn_helix ASNC type B856_01080 SM00487 DEAD-like helicases superfamily B856_01080 SM00490 helicase superfamily c-terminal domain B856_01110 SM00880 B856_01110 B856_01110 SM01118 B856_01110 B856_01160 SM01329 B856_01160 B856_01260 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B856_01280 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_01295 SM00487 DEAD-like helicases superfamily B856_01295 SM00490 helicase superfamily c-terminal domain B856_01305 SM00267 diguanylate cyclase B856_01370 SM00358 Double-stranded RNA binding motif B856_01370 SM00535 Ribonuclease III family B856_01385 SM00838 Elongation factor G C-terminus B856_01395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B856_01445 SM00382 ATPases associated with a variety of cellular activities B856_01520 SM01211 B856_01520 B856_01525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B856_01530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B856_01535 SM00382 ATPases associated with a variety of cellular activities B856_01650 SM00849 Metallo-beta-lactamase superfamily B856_01655 SM00382 ATPases associated with a variety of cellular activities B856_01725 SM00434 DNA Topoisomerase IV B856_01730 SM00893 Electron transfer flavoprotein domain B856_01735 SM00893 Electron transfer flavoprotein domain B856_01770 SM00382 ATPases associated with a variety of cellular activities B856_01775 SM00978 B856_01775 B856_01905 SM00849 Metallo-beta-lactamase superfamily B856_01920 SM00883 Chaperonin 10 Kd subunit B856_01965 SM00073 Histidine Phosphotransfer domain B856_01965 SM00260 Two component signalling adaptor domain B856_01965 SM00387 Histidine kinase-like ATPases B856_01965 SM00448 cheY-homologous receiver domain B856_01965 SM01231 B856_01965 B856_01970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B856_01975 SM00260 Two component signalling adaptor domain B856_01980 SM00448 cheY-homologous receiver domain B856_01985 SM00448 cheY-homologous receiver domain B856_02040 SM00671 Sel1-like repeats. B856_02085 SM00382 ATPases associated with a variety of cellular activities B856_02085 SM00994 ClpX C4-type zinc finger B856_02085 SM01086 C-terminal, D2-small domain, of ClpB protein B856_02105 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. B856_02110 SM00917 LeuA allosteric (dimerisation) domain B856_02125 SM00671 Sel1-like repeats. B856_02265 SM00360 RNA recognition motif B856_02285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B856_02285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B856_02285 SM00493 B856_02285 B856_02300 SM00829 Enoylreductase B856_02310 SM00382 ATPases associated with a variety of cellular activities B856_02340 SM00859 Semialdehyde dehydrogenase, NAD binding domain B856_02355 SM00870 B856_02355 B856_02365 SM00342 helix_turn_helix, arabinose operon control protein B856_02370 SM00316 Ribosomal protein S1-like RNA-binding domain B856_02385 SM01329 B856_02385 B856_02435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B856_02475 SM00363 S4 RNA-binding domain B856_02480 SM00316 Ribosomal protein S1-like RNA-binding domain B856_02520 SM00248 ankyrin repeats B856_02555 SM00382 ATPases associated with a variety of cellular activities B856_02555 SM01086 C-terminal, D2-small domain, of ClpB protein B856_02630 SM00382 ATPases associated with a variety of cellular activities B856_02670 SM00796 Allophanate hydrolase subunit 1 B856_02670 SM00797 Allophanate hydrolase subunit 2 B856_02670 SM00878 Biotin carboxylase C-terminal domain B856_02685 SM00829 Enoylreductase B856_02715 SM00671 Sel1-like repeats. B856_02725 SM00878 Biotin carboxylase C-terminal domain B856_02730 SM00796 Allophanate hydrolase subunit 1 B856_02730 SM00797 Allophanate hydrolase subunit 2 B856_02805 SM00422 helix_turn_helix, mercury resistance B856_02835 SM00052 Putative diguanylate phosphodiesterase B856_02845 SM00344 helix_turn_helix ASNC type B856_02855 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B856_02855 SM00534 ATPase domain of DNA mismatch repair MUTS family B856_02900 SM00382 ATPases associated with a variety of cellular activities B856_02910 SM00382 ATPases associated with a variety of cellular activities B856_02930 SM00116 Domain in cystathionine beta-synthase and other proteins. B856_02935 SM00840 B856_02935 B856_03005 SM00357 Cold shock protein domain B856_03030 SM00530 Helix-turn-helix XRE-family like proteins B856_03080 SM00422 helix_turn_helix, mercury resistance B856_03140 SM00382 ATPases associated with a variety of cellular activities B856_03140 SM00487 DEAD-like helicases superfamily B856_03140 SM00490 helicase superfamily c-terminal domain B856_03140 SM00847 Helicase associated domain (HA2) Add an annotation B856_03185 SM00474 3'-5' exonuclease B856_03195 SM00530 Helix-turn-helix XRE-family like proteins B856_03215 SM00357 Cold shock protein domain B856_03235 SM00342 helix_turn_helix, arabinose operon control protein B856_03255 SM00477 DNA/RNA non-specific endonuclease B856_03255 SM00892 DNA/RNA non-specific endonuclease B856_03310 SM00671 Sel1-like repeats. B856_03320 SM00342 helix_turn_helix, arabinose operon control protein B856_03400 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_03410 SM00530 Helix-turn-helix XRE-family like proteins B856_03455 SM00829 Enoylreductase B856_03475 SM00267 diguanylate cyclase B856_03505 SM00387 Histidine kinase-like ATPases B856_03505 SM00388 His Kinase A (phosphoacceptor) domain B856_03505 SM00448 cheY-homologous receiver domain B856_03515 SM00421 helix_turn_helix, Lux Regulon B856_03515 SM00448 cheY-homologous receiver domain B856_03530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B856_03540 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. B856_03600 SM00470 ParB-like nuclease domain B856_03615 SM00382 ATPases associated with a variety of cellular activities B856_03675 SM00986 Uracil DNA glycosylase superfamily B856_03675 SM00987 UreE urease accessory protein, C-terminal domain B856_03700 SM00316 Ribosomal protein S1-like RNA-binding domain B856_03705 SM00411 bacterial (prokaryotic) histone like domain B856_03715 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B856_03730 SM00342 helix_turn_helix, arabinose operon control protein B856_03805 SM00382 ATPases associated with a variety of cellular activities B856_03860 SM00487 DEAD-like helicases superfamily B856_03860 SM00490 helicase superfamily c-terminal domain B856_03860 SM00982 B856_03860 B856_03860 SM01058 CarD-like/TRCF domain B856_03870 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain B856_03885 SM00271 DnaJ molecular chaperone homology domain B856_03920 SM00411 bacterial (prokaryotic) histone like domain B856_03930 SM00342 helix_turn_helix, arabinose operon control protein B856_04020 SM01006 Siderophore biosynthesis protein domain B856_04050 SM00855 Phosphoglycerate mutase family B856_04110 SM00382 ATPases associated with a variety of cellular activities B856_04150 SM01324 B856_04150 B856_04200 SM00493 B856_04200 B856_04205 SM00341 Helicase and RNase D C-terminal B856_04205 SM00474 3'-5' exonuclease B856_04235 SM00382 ATPases associated with a variety of cellular activities B856_04260 SM00267 diguanylate cyclase B856_04275 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_04285 SM00861 Transketolase, pyrimidine binding domain B856_04305 SM00829 Enoylreductase B856_04315 SM00382 ATPases associated with a variety of cellular activities B856_04320 SM00849 Metallo-beta-lactamase superfamily B856_04345 SM00342 helix_turn_helix, arabinose operon control protein B856_04365 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_04365 SM00866 B856_04365 B856_04390 SM00382 ATPases associated with a variety of cellular activities B856_04395 SM00567 E-Z type HEAT repeats B856_04450 SM00882 Coenzyme A transferase B856_04455 SM00882 Coenzyme A transferase B856_04540 SM00342 helix_turn_helix, arabinose operon control protein B856_04560 SM00382 ATPases associated with a variety of cellular activities B856_04610 SM00382 ATPases associated with a variety of cellular activities B856_04635 SM00919 Malic enzyme, NAD binding domain B856_04635 SM01274 B856_04635 B856_04640 SM00836 DALR anticodon binding domain B856_04640 SM01016 Arginyl tRNA synthetase N terminal dom B856_04755 SM00823 Phosphopantetheine attachment site B856_04755 SM00824 Thioesterase B856_04765 SM00823 Phosphopantetheine attachment site B856_04765 SM01294 B856_04765 B856_04780 SM00421 helix_turn_helix, Lux Regulon B856_04850 SM01005 Alanine racemase, C-terminal domain B856_04860 SM00344 helix_turn_helix ASNC type B856_04910 SM00825 Beta-ketoacyl synthase B856_04955 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_04955 SM00895 B856_04955 B856_04975 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_04975 SM00895 B856_04975 B856_05000 SM00984 UDP binding domain B856_05065 SM00984 UDP binding domain B856_05075 SM00226 Low molecular weight phosphatase family B856_05100 SM00644 B856_05100 B856_05185 SM00062 Bacterial periplasmic substrate-binding proteins B856_05190 SM00062 Bacterial periplasmic substrate-binding proteins B856_05205 SM00382 ATPases associated with a variety of cellular activities B856_05225 SM00904 Riboflavin kinase B856_05250 SM00248 ankyrin repeats B856_05375 SM00342 helix_turn_helix, arabinose operon control protein B856_05400 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_05400 SM00895 B856_05400 B856_05410 SM01130 B856_05410 B856_05425 SM00422 helix_turn_helix, mercury resistance B856_05450 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_05450 SM00895 B856_05450 B856_05465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B856_05480 SM00882 Coenzyme A transferase B856_05485 SM00882 Coenzyme A transferase B856_05520 SM00342 helix_turn_helix, arabinose operon control protein B856_05525 SM00903 Flavin reductase like domain B856_05570 SM00347 helix_turn_helix multiple antibiotic resistance protein B856_05595 SM00855 Phosphoglycerate mutase family B856_05615 SM00346 helix_turn_helix isocitrate lyase regulation B856_05620 SM00849 Metallo-beta-lactamase superfamily B856_05640 SM00564 beta-propeller repeat B856_05650 SM00710 Parallel beta-helix repeats B856_05685 SM00998 Adenylosuccinate lyase C-terminus B856_05695 SM00882 Coenzyme A transferase B856_05700 SM00882 Coenzyme A transferase B856_05720 SM01192 B856_05720 B856_05720 SM01193 B856_05720 B856_05785 SM00382 ATPases associated with a variety of cellular activities B856_05785 SM01086 C-terminal, D2-small domain, of ClpB protein B856_05800 SM00859 Semialdehyde dehydrogenase, NAD binding domain B856_05840 SM01264 B856_05840 B856_05905 SM00382 ATPases associated with a variety of cellular activities B856_05905 SM00962 SRP54-type protein, GTPase domain B856_05905 SM00963 SRP54-type protein, helical bundle domain B856_05935 SM00116 Domain in cystathionine beta-synthase and other proteins. B856_06015 SM00347 helix_turn_helix multiple antibiotic resistance protein B856_06025 SM00052 Putative diguanylate phosphodiesterase B856_06025 SM00091 PAS domain B856_06025 SM00267 diguanylate cyclase B856_06070 SM00344 helix_turn_helix ASNC type B856_06100 SM00363 S4 RNA-binding domain B856_06105 SM00382 ATPases associated with a variety of cellular activities B856_06135 SM00935 Outer membrane protein (OmpH-like) B856_06145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B856_06175 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_06180 SM00091 PAS domain B856_06180 SM00387 Histidine kinase-like ATPases B856_06180 SM00388 His Kinase A (phosphoacceptor) domain B856_06185 SM00382 ATPases associated with a variety of cellular activities B856_06185 SM00448 cheY-homologous receiver domain B856_06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_06280 SM00852 Probable molybdopterin binding domain B856_06285 SM00852 Probable molybdopterin binding domain B856_06300 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_06305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B856_06315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B856_06335 SM00448 cheY-homologous receiver domain B856_06335 SM01012 B856_06335 B856_06360 SM00878 Biotin carboxylase C-terminal domain B856_06460 SM01230 B856_06460 B856_06515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B856_06525 SM00919 Malic enzyme, NAD binding domain B856_06525 SM01274 B856_06525 B856_06530 SM00052 Putative diguanylate phosphodiesterase B856_06530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B856_06530 SM00091 PAS domain B856_06530 SM00267 diguanylate cyclase B856_06545 SM00996 S-adenosyl-L-homocysteine hydrolase B856_06545 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B856_06565 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_06615 SM00342 helix_turn_helix, arabinose operon control protein B856_06665 SM00382 ATPases associated with a variety of cellular activities B856_06680 SM00479 B856_06680 B856_06720 SM00062 Bacterial periplasmic substrate-binding proteins B856_06735 SM00382 ATPases associated with a variety of cellular activities B856_06755 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_06780 SM00382 ATPases associated with a variety of cellular activities B856_06790 SM00448 cheY-homologous receiver domain B856_06790 SM00862 Transcriptional regulatory protein, C terminal B856_06795 SM00387 Histidine kinase-like ATPases B856_06795 SM00388 His Kinase A (phosphoacceptor) domain B856_06850 SM00830 Chorismate mutase type II B856_06915 SM00357 Cold shock protein domain B856_06920 SM00487 DEAD-like helicases superfamily B856_06920 SM00490 helicase superfamily c-terminal domain B856_06940 SM00855 Phosphoglycerate mutase family B856_07020 SM00220 Serine/Threonine protein kinases, catalytic domain B856_07050 SM00564 beta-propeller repeat B856_07120 SM00387 Histidine kinase-like ATPases B856_07150 SM00448 cheY-homologous receiver domain B856_07150 SM00862 Transcriptional regulatory protein, C terminal B856_07155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B856_07155 SM00387 Histidine kinase-like ATPases B856_07155 SM00388 His Kinase A (phosphoacceptor) domain B856_07165 SM00267 diguanylate cyclase B856_07190 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B856_07195 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B856_07195 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B856_07240 SM00357 Cold shock protein domain B856_07380 SM00382 ATPases associated with a variety of cellular activities B856_07380 SM00962 SRP54-type protein, GTPase domain B856_07380 SM00963 SRP54-type protein, helical bundle domain B856_07400 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_07410 SM00771 ZipA, C-terminal domain (FtsZ-binding) B856_07415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B856_07415 SM00292 breast cancer carboxy-terminal domain B856_07415 SM00532 Ligase N family B856_07465 SM00363 S4 RNA-binding domain B856_07500 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B856_07505 SM00822 B856_07505 B856_07515 SM00257 Lysin motif B856_07560 SM01400 B856_07560 B856_07595 SM00342 helix_turn_helix, arabinose operon control protein B856_07610 SM00829 Enoylreductase B856_07625 SM00382 ATPases associated with a variety of cellular activities B856_07635 SM00342 helix_turn_helix, arabinose operon control protein B856_07645 SM01400 B856_07645 B856_07725 SM00421 helix_turn_helix, Lux Regulon B856_07780 SM00530 Helix-turn-helix XRE-family like proteins B856_07820 SM00822 B856_07820 B856_07825 SM00822 B856_07825 B856_07835 SM00342 helix_turn_helix, arabinose operon control protein B856_07845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B856_07845 SM00387 Histidine kinase-like ATPases B856_07845 SM00388 His Kinase A (phosphoacceptor) domain B856_07850 SM00448 cheY-homologous receiver domain B856_07850 SM00862 Transcriptional regulatory protein, C terminal B856_07940 SM01060 B856_07940 B856_07955 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_07955 SM00895 B856_07955 B856_07970 SM00903 Flavin reductase like domain B856_08020 SM00346 helix_turn_helix isocitrate lyase regulation B856_08030 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_08030 SM00866 B856_08030 B856_08040 SM00382 ATPases associated with a variety of cellular activities B856_08085 SM00346 helix_turn_helix isocitrate lyase regulation B856_08105 SM00346 helix_turn_helix isocitrate lyase regulation B856_08140 SM00882 Coenzyme A transferase B856_08145 SM00882 Coenzyme A transferase B856_08190 SM00878 Biotin carboxylase C-terminal domain B856_08275 SM01236 B856_08275 B856_08280 SM01060 B856_08280 B856_08310 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_08375 SM00849 Metallo-beta-lactamase superfamily B856_08410 SM00116 Domain in cystathionine beta-synthase and other proteins. B856_08410 SM01091 Transporter associated domain B856_08440 SM00487 DEAD-like helicases superfamily B856_08440 SM00490 helicase superfamily c-terminal domain B856_08460 SM00271 DnaJ molecular chaperone homology domain B856_08475 SM00316 Ribosomal protein S1-like RNA-binding domain B856_08475 SM00322 K homology RNA-binding domain B856_08480 SM01387 B856_08480 B856_08490 SM00382 ATPases associated with a variety of cellular activities B856_08595 SM00316 Ribosomal protein S1-like RNA-binding domain B856_08655 SM00967 RNA 2'-O ribose methyltransferase substrate binding B856_08680 SM00732 Likely ribonuclease with RNase H fold. B856_08700 SM00346 helix_turn_helix isocitrate lyase regulation B856_08710 SM00342 helix_turn_helix, arabinose operon control protein B856_08725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B856_08725 SM00465 GIY-YIG type nucleases (URI domain) B856_08775 SM00422 helix_turn_helix, mercury resistance B856_08800 SM00387 Histidine kinase-like ATPases B856_08840 SM00663 RNA polymerase I subunit A N-terminus B856_08865 SM00649 Ribosomal protein L11/L12 B856_08870 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B856_08870 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B856_08955 SM00671 Sel1-like repeats. B856_08960 SM00382 ATPases associated with a variety of cellular activities B856_08975 SM00947 Carbonic anhydrase B856_08980 SM00316 Ribosomal protein S1-like RNA-binding domain B856_08980 SM00732 Likely ribonuclease with RNase H fold. B856_08985 SM00448 cheY-homologous receiver domain B856_08985 SM00862 Transcriptional regulatory protein, C terminal B856_08990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B856_08990 SM00387 Histidine kinase-like ATPases B856_08990 SM00388 His Kinase A (phosphoacceptor) domain B856_09005 SM00487 DEAD-like helicases superfamily B856_09005 SM00490 helicase superfamily c-terminal domain B856_09015 SM00861 Transketolase, pyrimidine binding domain B856_09055 SM00116 Domain in cystathionine beta-synthase and other proteins. B856_09155 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_09345 SM00072 Guanylate kinase homologues. B856_09350 SM01409 B856_09350 B856_09355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B856_09355 SM00954 Region found in RelA / SpoT proteins B856_09435 SM00965 Secretin and TonB N terminus short domain B856_09455 SM00842 Cell division protein FtsA B856_09565 SM00849 Metallo-beta-lactamase superfamily B856_09590 SM00235 Zinc-dependent metalloprotease B856_09595 SM00235 Zinc-dependent metalloprotease B856_09615 SM01001 AIR carboxylase B856_09640 SM00014 Acid phosphatase homologues B856_09710 SM01234 B856_09710 B856_09725 SM00382 ATPases associated with a variety of cellular activities B856_09725 SM00760 Bacterial dnaA protein helix-turn-helix domain B856_09730 SM00480 DNA polymerase III beta subunit B856_09740 SM00387 Histidine kinase-like ATPases B856_09740 SM00433 TopoisomeraseII B856_09755 SM00382 ATPases associated with a variety of cellular activities B856_09845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B856_09845 SM00245 tail specific protease B856_09855 SM00014 Acid phosphatase homologues B856_09865 SM00562 B856_09865 B856_09875 SM00028 Tetratricopeptide repeats B856_09900 SM00564 beta-propeller repeat B856_09915 SM00563 Phosphate acyltransferases B856_09980 SM00825 Beta-ketoacyl synthase B856_09990 SM00822 B856_09990 B856_09995 SM00825 Beta-ketoacyl synthase B856_10020 SM00450 Rhodanese Homology Domain B856_10030 SM00479 B856_10030 B856_10050 SM00382 ATPases associated with a variety of cellular activities B856_10095 SM00052 Putative diguanylate phosphodiesterase B856_10095 SM00267 diguanylate cyclase B856_10110 SM01236 B856_10110 B856_10180 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B856_10180 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B856_10220 SM00073 Histidine Phosphotransfer domain B856_10220 SM00387 Histidine kinase-like ATPases B856_10220 SM00388 His Kinase A (phosphoacceptor) domain B856_10220 SM00448 cheY-homologous receiver domain B856_10240 SM00954 Region found in RelA / SpoT proteins B856_10255 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B856_10300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B856_10355 SM00873 B3/4 domain B856_10355 SM00874 tRNA synthetase B5 domain B856_10355 SM00896 Ferredoxin-fold anticodon binding domain B856_10360 SM00411 bacterial (prokaryotic) histone like domain B856_10370 SM00357 Cold shock protein domain B856_10370 SM00382 ATPases associated with a variety of cellular activities B856_10370 SM00959 Rho termination factor, N-terminal domain B856_10390 SM00977 TilS substrate C-terminal domain B856_10405 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B856_10405 SM00474 3'-5' exonuclease B856_10405 SM00475 5'-3' exonuclease B856_10405 SM00482 DNA polymerase A domain B856_10435 SM00316 Ribosomal protein S1-like RNA-binding domain B856_10435 SM00955 B856_10435 B856_10505 SM00662 RNA polymerases D B856_10510 SM00363 S4 RNA-binding domain B856_10510 SM01390 B856_10510 B856_10575 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B856_10580 SM01374 B856_10580 B856_10600 SM00322 K homology RNA-binding domain B856_10615 SM01382 B856_10615 B856_10615 SM01383 B856_10615 B856_10635 SM01403 B856_10635 B856_10685 SM00563 Phosphate acyltransferases B856_10700 SM00487 DEAD-like helicases superfamily B856_10700 SM00490 helicase superfamily c-terminal domain B856_10745 SM00382 ATPases associated with a variety of cellular activities B856_10800 SM00450 Rhodanese Homology Domain B856_10825 SM00481 DNA polymerase alpha chain like domain B856_10855 SM01323 B856_10855 B856_10885 SM00387 Histidine kinase-like ATPases B856_10885 SM00388 His Kinase A (phosphoacceptor) domain B856_11010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B856_11010 SM00387 Histidine kinase-like ATPases B856_11010 SM00388 His Kinase A (phosphoacceptor) domain B856_11015 SM00448 cheY-homologous receiver domain B856_11015 SM00862 Transcriptional regulatory protein, C terminal B856_11075 SM00342 helix_turn_helix, arabinose operon control protein B856_11105 SM00849 Metallo-beta-lactamase superfamily B856_11115 SM00957 SecA DEAD-like domain B856_11115 SM00958 SecA preprotein cross-linking domain B856_11165 SM00342 helix_turn_helix, arabinose operon control protein B856_11180 SM00564 beta-propeller repeat B856_11245 SM00838 Elongation factor G C-terminus B856_11265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B856_11265 SM01232 B856_11265 B856_11345 SM00382 ATPases associated with a variety of cellular activities B856_11355 SM00947 Carbonic anhydrase B856_11415 SM01018 B12 binding domain B856_11420 SM00861 Transketolase, pyrimidine binding domain B856_11435 SM00822 B856_11435 B856_11460 SM00342 helix_turn_helix, arabinose operon control protein B856_11535 SM00822 B856_11535 B856_11555 SM00346 helix_turn_helix isocitrate lyase regulation B856_11595 SM01322 B856_11595 B856_11715 SM00965 Secretin and TonB N terminus short domain B856_11735 SM01130 B856_11735 B856_11830 SM01040 BRO family, N-terminal domain B856_11920 SM00530 Helix-turn-helix XRE-family like proteins B856_12160 SM00530 Helix-turn-helix XRE-family like proteins B856_12190 SM00382 ATPases associated with a variety of cellular activities B856_12285 SM00479 B856_12285 B856_12335 SM00901 B856_12335 B856_12375 SM01004 Delta-aminolevulinic acid dehydratase B856_12425 SM00382 ATPases associated with a variety of cellular activities B856_12495 SM00563 Phosphate acyltransferases B856_12540 SM00855 Phosphoglycerate mutase family B856_12555 SM00091 PAS domain B856_12555 SM00382 ATPases associated with a variety of cellular activities B856_12575 SM00829 Enoylreductase B856_12595 SM01060 B856_12595 B856_12620 SM00347 helix_turn_helix multiple antibiotic resistance protein B856_12640 SM00422 helix_turn_helix, mercury resistance B856_12715 SM00912 haemagglutination activity domain B856_12750 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_12750 SM00866 B856_12750 B856_12780 SM00346 helix_turn_helix isocitrate lyase regulation B856_12850 SM00028 Tetratricopeptide repeats B856_12860 SM00400 zinc finger B856_12860 SM00493 B856_12860 B856_12870 SM00363 S4 RNA-binding domain B856_12915 SM01329 B856_12915 B856_12975 SM00825 Beta-ketoacyl synthase B856_12995 SM00838 Elongation factor G C-terminus B856_12995 SM00889 Elongation factor G, domain IV B856_13040 SM01236 B856_13040 B856_13075 SM00226 Low molecular weight phosphatase family B856_13105 SM00382 ATPases associated with a variety of cellular activities B856_13130 SM00822 B856_13130 B856_13160 SM00344 helix_turn_helix ASNC type B856_13175 SM00831 Cation transporter/ATPase, N-terminus B856_13200 SM00382 ATPases associated with a variety of cellular activities B856_13225 SM00530 Helix-turn-helix XRE-family like proteins B856_13420 SM00287 Bacterial SH3 domain homologues B856_13565 SM00881 CoA binding domain B856_13585 SM00861 Transketolase, pyrimidine binding domain B856_13620 SM00450 Rhodanese Homology Domain B856_13730 SM00014 Acid phosphatase homologues B856_13765 SM00822 B856_13765 B856_13810 SM00387 Histidine kinase-like ATPases B856_13810 SM00388 His Kinase A (phosphoacceptor) domain B856_13815 SM00448 cheY-homologous receiver domain B856_13815 SM00862 Transcriptional regulatory protein, C terminal B856_13830 SM00849 Metallo-beta-lactamase superfamily B856_13840 SM00382 ATPases associated with a variety of cellular activities B856_13840 SM00930 B856_13840 B856_13850 SM01209 B856_13850 B856_13850 SM01210 B856_13850 B856_13855 SM00798 AICARFT/IMPCHase bienzyme B856_13855 SM00851 MGS-like domain B856_13880 SM01228 B856_13880 B856_13905 SM00460 Transglutaminase/protease-like homologues B856_13915 SM01005 Alanine racemase, C-terminal domain B856_14030 SM00937 B856_14030 B856_14045 SM00062 Bacterial periplasmic substrate-binding proteins B856_14050 SM00342 helix_turn_helix, arabinose operon control protein B856_14055 SM00822 B856_14055 B856_14070 SM00903 Flavin reductase like domain B856_14085 SM00905 Dihydroneopterin aldolase B856_14110 SM00387 Histidine kinase-like ATPases B856_14110 SM00388 His Kinase A (phosphoacceptor) domain B856_14115 SM00448 cheY-homologous receiver domain B856_14115 SM00862 Transcriptional regulatory protein, C terminal B856_14120 SM01230 B856_14120 B856_14200 SM00363 S4 RNA-binding domain B856_14225 SM00853 MutL C terminal dimerisation domain B856_14225 SM01340 B856_14225 B856_14295 SM00862 Transcriptional regulatory protein, C terminal B856_14310 SM00382 ATPases associated with a variety of cellular activities B856_14320 SM00342 helix_turn_helix, arabinose operon control protein B856_14320 SM00871 Bacterial transcription activator, effector binding domain B856_14375 SM00267 diguanylate cyclase B856_14385 SM00479 B856_14385 B856_14405 SM00382 ATPases associated with a variety of cellular activities B856_14425 SM00257 Lysin motif B856_14430 SM00479 B856_14430 B856_14485 SM00422 helix_turn_helix, mercury resistance B856_14505 SM01011 Aminopeptidase P, N-terminal domain B856_14585 SM00382 ATPases associated with a variety of cellular activities B856_14590 SM00382 ATPases associated with a variety of cellular activities B856_14635 SM00382 ATPases associated with a variety of cellular activities B856_14705 SM00829 Enoylreductase B856_14710 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B856_14850 SM00841 Elongation factor P, C-terminal B856_14850 SM01185 B856_14850 B856_14865 SM00052 Putative diguanylate phosphodiesterase B856_14900 SM00257 Lysin motif B856_14920 SM00936 Penicillin-binding protein 5, C-terminal domain B856_15010 SM00938 Nitrogen regulatory protein P-II B856_15075 SM00245 tail specific protease B856_15080 SM00382 ATPases associated with a variety of cellular activities B856_15080 SM00448 cheY-homologous receiver domain B856_15085 SM00387 Histidine kinase-like ATPases B856_15085 SM00388 His Kinase A (phosphoacceptor) domain B856_15090 SM00421 helix_turn_helix, Lux Regulon B856_15090 SM00448 cheY-homologous receiver domain B856_15120 SM00899 B856_15120 B856_15210 SM00448 cheY-homologous receiver domain B856_15210 SM00850 LytTr DNA-binding domain B856_15240 SM00528 Domain in histone-like proteins of HNS family B856_15250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B856_15260 SM00240 Forkhead associated domain B856_15305 SM00344 helix_turn_helix ASNC type B856_15340 SM00867 YceI-like domain B856_15350 SM00861 Transketolase, pyrimidine binding domain B856_15385 SM00530 Helix-turn-helix XRE-family like proteins B856_15405 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_15405 SM00876 Biotin and Thiamin Synthesis associated domain B856_15490 SM01236 B856_15490 B856_15500 SM00563 Phosphate acyltransferases B856_15510 SM00344 helix_turn_helix ASNC type B856_15520 SM00382 ATPases associated with a variety of cellular activities B856_15535 SM00062 Bacterial periplasmic substrate-binding proteins B856_15570 SM00382 ATPases associated with a variety of cellular activities B856_15570 SM00930 B856_15570 B856_15590 SM00100 Cyclic nucleotide-monophosphate binding domain B856_15590 SM00419 helix_turn_helix, cAMP Regulatory protein B856_15625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B856_15640 SM00342 helix_turn_helix, arabinose operon control protein B856_15665 SM00870 B856_15665 B856_15670 SM00481 DNA polymerase alpha chain like domain B856_15715 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. B856_15745 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_15795 SM00342 helix_turn_helix, arabinose operon control protein B856_15870 SM00563 Phosphate acyltransferases B856_15885 SM00244 prohibitin homologues B856_15920 SM00829 Enoylreductase B856_15925 SM00342 helix_turn_helix, arabinose operon control protein B856_15945 SM00342 helix_turn_helix, arabinose operon control protein B856_15985 SM00316 Ribosomal protein S1-like RNA-binding domain B856_16020 SM00845 GatB domain B856_16065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B856_16095 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_16095 SM00895 B856_16095 B856_16120 SM00382 ATPases associated with a variety of cellular activities B856_16125 SM00062 Bacterial periplasmic substrate-binding proteins B856_16170 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_16190 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B856_16245 SM00345 helix_turn_helix gluconate operon transcriptional repressor B856_16285 SM00822 B856_16285 B856_16290 SM00450 Rhodanese Homology Domain B856_16320 SM00062 Bacterial periplasmic substrate-binding proteins B856_16325 SM00062 Bacterial periplasmic substrate-binding proteins B856_16330 SM00382 ATPases associated with a variety of cellular activities B856_16350 SM00421 helix_turn_helix, Lux Regulon B856_16350 SM00448 cheY-homologous receiver domain B856_16355 SM00387 Histidine kinase-like ATPases B856_16355 SM00388 His Kinase A (phosphoacceptor) domain B856_16355 SM00448 cheY-homologous receiver domain B856_16365 SM00344 helix_turn_helix ASNC type B856_16480 SM00267 diguanylate cyclase B856_16495 SM00155 Phospholipase D. Active site motifs. B856_16500 SM00563 Phosphate acyltransferases B856_16530 SM00650 Ribosomal RNA adenine dimethylases B856_16565 SM00878 Biotin carboxylase C-terminal domain B856_16640 SM00422 helix_turn_helix, mercury resistance B856_16650 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_16670 SM00641 Glycosyl hydrolases family 25 B856_16685 SM01091 Transporter associated domain B856_16705 SM00434 DNA Topoisomerase IV B856_16745 SM01130 B856_16745 B856_16750 SM01007 Class II Aldolase and Adducin N-terminal domain B856_16935 SM00829 Enoylreductase B856_16965 SM00155 Phospholipase D. Active site motifs. B856_16990 SM00729 Elongator protein 3, MiaB family, Radical SAM B856_17035 SM00382 ATPases associated with a variety of cellular activities B856_17070 SM00342 helix_turn_helix, arabinose operon control protein B856_17080 SM00903 Flavin reductase like domain B856_17105 SM00342 helix_turn_helix, arabinose operon control protein B856_17110 SM00100 Cyclic nucleotide-monophosphate binding domain B856_17110 SM00419 helix_turn_helix, cAMP Regulatory protein B856_17130 SM00382 ATPases associated with a variety of cellular activities B856_17130 SM01086 C-terminal, D2-small domain, of ClpB protein B856_17145 SM00981 B856_17145 B856_17215 SM00046 Diacylglycerol kinase catalytic domain (presumed) B856_17290 SM00382 ATPases associated with a variety of cellular activities B856_17300 SM01103 B856_17300 B856_17315 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B856_17320 SM00851 MGS-like domain B856_17320 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B856_17350 SM00854 Bacterial capsule synthesis protein PGA_cap B856_17365 SM00530 Helix-turn-helix XRE-family like proteins B856_17515 SM00342 helix_turn_helix, arabinose operon control protein B856_17545 SM00903 Flavin reductase like domain B856_17640 SM01091 Transporter associated domain B856_17690 SM00988 UreE urease accessory protein, N-terminal domain B856_17740 SM00478 endonuclease III B856_17750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B856_17770 SM00382 ATPases associated with a variety of cellular activities B856_17770 SM00464 Found in ATP-dependent protease La (LON) B856_17785 SM00331 Sigma factor PP2C-like phosphatases B856_17805 SM00347 helix_turn_helix multiple antibiotic resistance protein B856_17815 SM00382 ATPases associated with a variety of cellular activities B856_17850 SM00530 Helix-turn-helix XRE-family like proteins B856_17995 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B856_18000 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B856_18010 SM00788 Adenylosuccinate synthetase B856_18125 SM00843 B856_18125 B856_18325 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B856_18330 SM01092 CO dehydrogenase flavoprotein C-terminal domain B856_18350 SM00830 Chorismate mutase type II B856_18355 SM00344 helix_turn_helix ASNC type B856_18435 SM00382 ATPases associated with a variety of cellular activities B856_18445 SM00342 helix_turn_helix, arabinose operon control protein B856_18480 SM00857 Resolvase, N terminal domain B856_18590 SM00530 Helix-turn-helix XRE-family like proteins B856_18630 SM00857 Resolvase, N terminal domain B856_18835 SM00318 Staphylococcal nuclease homologues B856_18845 SM00528 Domain in histone-like proteins of HNS family B856_18905 SM00470 ParB-like nuclease domain B856_19040 SM00671 Sel1-like repeats. B856_19080 SM00382 ATPases associated with a variety of cellular activities