locus-tag class description LN920_00040 PF13274 Protein of unknown function (DUF4065) LN920_00320 PF00117 Glutamine amidotransferase class-I LN920_00340 PF07715 TonB-dependent Receptor Plug Domain LN920_00340 PF00593 TonB dependent receptor LN920_00345 PF02885 Glycosyl transferase family, helical bundle domain LN920_00345 PF00591 Glycosyl transferase family, a/b domain LN920_00350 PF00218 Indole-3-glycerol phosphate synthase LN920_00380 PF01799 [2Fe-2S] binding domain LN920_00380 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_00385 PF01227 GTP cyclohydrolase I LN920_00395 PF00144 Beta-lactamase LN920_00410 PF05675 Protein of unknown function (DUF817) LN920_00415 PF01208 Uroporphyrinogen decarboxylase (URO-D) LN920_00425 PF00425 chorismate binding enzyme LN920_00435 PF00975 Thioesterase domain LN920_00440 PF00005 ABC transporter LN920_00445 PF00005 ABC transporter LN920_00450 PF00282 Pyridoxal-dependent decarboxylase conserved domain LN920_00455 PF00550 Phosphopantetheine attachment site LN920_00455 PF00857 Isochorismatase family LN920_00460 PF00501 AMP-binding enzyme LN920_00460 PF13193 AMP-binding enzyme C-terminal domain LN920_00465 PF00501 AMP-binding enzyme LN920_00465 PF00668 Condensation domain LN920_00465 PF00550 Phosphopantetheine attachment site LN920_00470 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LN920_00475 PF07715 TonB-dependent Receptor Plug Domain LN920_00475 PF00593 TonB dependent receptor LN920_00480 PF01497 Periplasmic binding protein LN920_00485 PF00005 ABC transporter LN920_00490 PF01032 FecCD transport family LN920_00495 PF01032 FecCD transport family LN920_00500 PF00668 Condensation domain LN920_00500 PF13193 AMP-binding enzyme C-terminal domain LN920_00500 PF00501 AMP-binding enzyme LN920_00500 PF00975 Thioesterase domain LN920_00500 PF00550 Phosphopantetheine attachment site LN920_00505 PF00668 Condensation domain LN920_00505 PF00550 Phosphopantetheine attachment site LN920_00505 PF00501 AMP-binding enzyme LN920_00505 PF13193 AMP-binding enzyme C-terminal domain LN920_00515 PF13309 HTH domain LN920_00515 PF08348 YheO-like PAS domain LN920_00525 PF17954 Quercetinase C-terminal cupin domain LN920_00525 PF02678 Pirin LN920_00545 PF00440 Bacterial regulatory proteins, tetR family LN920_00550 PF08659 KR domain LN920_00550 PF14765 Polyketide synthase dehydratase LN920_00550 PF00550 Phosphopantetheine attachment site LN920_00550 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_00550 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_00550 PF16197 Ketoacyl-synthetase C-terminal extension LN920_00550 PF09277 Erythronolide synthase, docking LN920_00550 PF00698 Acyl transferase domain LN920_00550 PF08240 Alcohol dehydrogenase GroES-like domain LN920_00550 PF08990 Erythronolide synthase docking LN920_00555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LN920_00555 PF13378 Enolase C-terminal domain-like LN920_00560 PF00083 Sugar (and other) transporter LN920_00565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LN920_00575 PF00892 EamA-like transporter family LN920_00595 PF01266 FAD dependent oxidoreductase LN920_00595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LN920_00600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_00600 PF18113 Rubredoxin binding C-terminal domain LN920_00610 PF00171 Aldehyde dehydrogenase family LN920_00615 PF00355 Rieske [2Fe-2S] domain LN920_00615 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LN920_00620 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_00625 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_00630 PF03466 LysR substrate binding domain LN920_00635 PF00324 Amino acid permease LN920_00640 PF00171 Aldehyde dehydrogenase family LN920_00655 PF13556 PucR C-terminal helix-turn-helix domain LN920_00655 PF17853 GGDEF-like domain LN920_00655 PF06018 CodY GAF-like domain LN920_00690 PF04328 Selenoprotein, putative LN920_00695 PF13722 5TM C-terminal transporter carbon starvation CstA LN920_00695 PF02554 Carbon starvation protein CstA LN920_00700 PF01132 Elongation factor P (EF-P) OB domain LN920_00700 PF08207 Elongation factor P (EF-P) KOW-like domain LN920_00700 PF09285 Elongation factor P, C-terminal LN920_00705 PF04055 Radical SAM superfamily LN920_00720 PF01197 Ribosomal protein L31 LN920_00725 PF13593 SBF-like CPA transporter family (DUF4137) LN920_00730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LN920_00735 PF07690 Major Facilitator Superfamily LN920_00740 PF13654 AAA domain LN920_00740 PF05362 Lon protease (S16) C-terminal proteolytic domain LN920_00750 PF01551 Peptidase family M23 LN920_00750 PF01476 LysM domain LN920_00755 PF01975 Survival protein SurE LN920_00770 PF00768 D-alanyl-D-alanine carboxypeptidase LN920_00770 PF07943 Penicillin-binding protein 5, C-terminal domain LN920_00775 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_00780 PF00293 NUDIX domain LN920_00780 PF13344 Haloacid dehalogenase-like hydrolase LN920_00790 PF04356 Protein of unknown function (DUF489) LN920_00795 PF00206 Lyase LN920_00795 PF08328 Adenylosuccinate lyase C-terminal LN920_00810 PF08496 Peptidase family S49 N-terminal LN920_00810 PF01343 Peptidase family S49 LN920_00815 PF00005 ABC transporter LN920_00820 PF00528 Binding-protein-dependent transport system inner membrane component LN920_00825 PF00528 Binding-protein-dependent transport system inner membrane component LN920_00830 PF12849 PBP superfamily domain LN920_00835 PF00324 Amino acid permease LN920_00840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN920_00840 PF00205 Thiamine pyrophosphate enzyme, central domain LN920_00840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LN920_00845 PF01037 Lrp/AsnC ligand binding domain LN920_00850 PF00171 Aldehyde dehydrogenase family LN920_00855 PF00282 Pyridoxal-dependent decarboxylase conserved domain LN920_00860 PF00202 Aminotransferase class-III LN920_00870 PF17754 MftR C-terminal domain LN920_00870 PF00440 Bacterial regulatory proteins, tetR family LN920_00880 PF00487 Fatty acid desaturase LN920_00885 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_00885 PF00970 Oxidoreductase FAD-binding domain LN920_00885 PF00175 Oxidoreductase NAD-binding domain LN920_00890 PF00440 Bacterial regulatory proteins, tetR family LN920_00900 PF00271 Helicase conserved C-terminal domain LN920_00900 PF12137 RNA polymerase recycling family C-terminal LN920_00900 PF00176 SNF2 family N-terminal domain LN920_00900 PF18339 RapA N-terminal Tudor like domain 1 LN920_00900 PF18337 RapA N-terminal Tudor like domain LN920_00905 PF00849 RNA pseudouridylate synthase LN920_00915 PF00202 Aminotransferase class-III LN920_00920 PF02581 Thiamine monophosphate synthase LN920_00945 PF05193 Peptidase M16 inactive domain LN920_00945 PF00675 Insulinase (Peptidase family M16) LN920_00950 PF02567 Phenazine biosynthesis-like protein LN920_00955 PF00375 Sodium:dicarboxylate symporter family LN920_00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_00960 PF03466 LysR substrate binding domain LN920_00965 PF06779 Uncharacterised MFS-type transporter YbfB LN920_00985 PF00180 Isocitrate/isopropylmalate dehydrogenase LN920_00990 PF00849 RNA pseudouridylate synthase LN920_00995 PF03971 Monomeric isocitrate dehydrogenase LN920_01005 PF07943 Penicillin-binding protein 5, C-terminal domain LN920_01005 PF00768 D-alanyl-D-alanine carboxypeptidase LN920_01010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_01015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_01020 PF00875 DNA photolyase LN920_01020 PF03441 FAD binding domain of DNA photolyase LN920_01050 PF02350 UDP-N-acetylglucosamine 2-epimerase LN920_01065 PF03060 Nitronate monooxygenase LN920_01070 PF01207 Dihydrouridine synthase (Dus) LN920_01075 PF07759 Protein of unknown function (DUF1615) LN920_01085 PF00696 Amino acid kinase family LN920_01085 PF01472 PUA domain LN920_01090 PF01018 GTP1/OBG LN920_01090 PF01926 50S ribosome-binding GTPase LN920_01105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LN920_01105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LN920_01110 PF00892 EamA-like transporter family LN920_01120 PF04851 Type III restriction enzyme, res subunit LN920_01120 PF12344 Ultra-violet resistance protein B LN920_01120 PF17757 UvrB interaction domain LN920_01120 PF02151 UvrB/uvrC motif LN920_01120 PF00271 Helicase conserved C-terminal domain LN920_01130 PF17151 Periplasmic sensor domain LN920_01130 PF00990 Diguanylate cyclase, GGDEF domain LN920_01140 PF00155 Aminotransferase class I and II LN920_01170 PF00106 short chain dehydrogenase LN920_01175 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LN920_01180 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LN920_01185 PF02565 Recombination protein O C terminal LN920_01185 PF11967 Recombination protein O N terminal LN920_01195 PF07650 KH domain LN920_01195 PF01926 50S ribosome-binding GTPase LN920_01200 PF00035 Double-stranded RNA binding motif LN920_01200 PF14622 Ribonuclease-III-like LN920_01210 PF10502 Signal peptidase, peptidase S26 LN920_01215 PF06421 GTP-binding protein LepA C-terminus LN920_01215 PF00679 Elongation factor G C-terminus LN920_01215 PF00009 Elongation factor Tu GTP binding domain LN920_01215 PF03144 Elongation factor Tu domain 2 LN920_01225 PF13180 PDZ domain LN920_01230 PF02910 Fumarate reductase flavoprotein C-term LN920_01230 PF00890 FAD binding domain LN920_01240 PF02223 Thymidylate kinase LN920_01245 PF02618 YceG-like family LN920_01250 PF01063 Amino-transferase class IV LN920_01265 PF00528 Binding-protein-dependent transport system inner membrane component LN920_01270 PF00528 Binding-protein-dependent transport system inner membrane component LN920_01275 PF00005 ABC transporter LN920_01275 PF12857 TOBE-like domain LN920_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_01280 PF03466 LysR substrate binding domain LN920_01290 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_01290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LN920_01290 PF14602 Hexapeptide repeat of succinyl-transferase LN920_01300 PF06508 Queuosine biosynthesis protein QueC LN920_01315 PF00578 AhpC/TSA family LN920_01325 PF01467 Cytidylyltransferase-like LN920_01325 PF00293 NUDIX domain LN920_01330 PF00378 Enoyl-CoA hydratase/isomerase LN920_01335 PF01784 NIF3 (NGG1p interacting factor 3) LN920_01340 PF07690 Major Facilitator Superfamily LN920_01345 PF02769 AIR synthase related protein, C-terminal domain LN920_01345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LN920_01345 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LN920_01350 PF01966 HD domain LN920_01355 PF01330 RuvA N terminal domain LN920_01355 PF07499 RuvA, C-terminal domain LN920_01360 PF17864 RuvB AAA lid domain LN920_01360 PF05491 RuvB C-terminal winged helix domain LN920_01360 PF05496 Holliday junction DNA helicase RuvB P-loop domain LN920_01365 PF07687 Peptidase dimerisation domain LN920_01365 PF01546 Peptidase family M20/M25/M40 LN920_01370 PF03061 Thioesterase superfamily LN920_01375 PF01618 MotA/TolQ/ExbB proton channel family LN920_01380 PF02472 Biopolymer transport protein ExbD/TolR LN920_01390 PF04052 TolB amino-terminal domain LN920_01390 PF07676 WD40-like Beta Propeller Repeat LN920_01395 PF00691 OmpA family LN920_01405 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LN920_01410 PF00588 SpoU rRNA Methylase family LN920_01410 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN920_01440 PF00308 Bacterial dnaA protein LN920_01440 PF11638 DnaA N-terminal domain LN920_01440 PF08299 Bacterial dnaA protein helix-turn-helix LN920_01445 PF01594 AI-2E family transporter LN920_01450 PF02769 AIR synthase related protein, C-terminal domain LN920_01450 PF00586 AIR synthase related protein, N-terminal domain LN920_01455 PF00551 Formyl transferase LN920_01460 PF12697 Alpha/beta hydrolase family LN920_01465 PF06965 Na+/H+ antiporter 1 LN920_01465 PF01343 Peptidase family S49 LN920_01475 PF00753 Metallo-beta-lactamase superfamily LN920_01475 PF03772 Competence protein LN920_01475 PF13567 Domain of unknown function (DUF4131) LN920_01480 PF00005 ABC transporter LN920_01485 PF12704 MacB-like periplasmic core domain LN920_01485 PF02687 FtsX-like permease family LN920_01495 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LN920_01510 PF00266 Aminotransferase class-V LN920_01520 PF13533 Biotin-lipoyl like LN920_01540 PF00535 Glycosyl transferase family 2 LN920_01555 PF03989 DNA gyrase C-terminal domain, beta-propeller LN920_01555 PF00521 DNA gyrase/topoisomerase IV, subunit A LN920_01560 PF01012 Electron transfer flavoprotein domain LN920_01560 PF00766 Electron transfer flavoprotein FAD-binding domain LN920_01565 PF01012 Electron transfer flavoprotein domain LN920_01570 PF00589 Phage integrase family LN920_01570 PF02899 Phage integrase, N-terminal SAM-like domain LN920_01575 PF01810 LysE type translocator LN920_01580 PF01678 Diaminopimelate epimerase LN920_01585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LN920_01585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LN920_01595 PF00324 Amino acid permease LN920_01600 PF18073 Rubredoxin metal binding domain LN920_01610 PF00152 tRNA synthetases class II (D, K and N) LN920_01615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN920_01615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN920_01615 PF11890 Domain of unknown function (DUF3410) LN920_01620 PF06803 Protein of unknown function (DUF1232) LN920_01625 PF02634 FdhD/NarQ family LN920_01630 PF00384 Molybdopterin oxidoreductase LN920_01635 PF02595 Glycerate kinase family LN920_01650 PF00881 Nitroreductase family LN920_01680 PF00501 AMP-binding enzyme LN920_01680 PF13193 AMP-binding enzyme C-terminal domain LN920_01680 PF00668 Condensation domain LN920_01680 PF00550 Phosphopantetheine attachment site LN920_01680 PF00975 Thioesterase domain LN920_01695 PF03449 Transcription elongation factor, N-terminal LN920_01695 PF01272 Transcription elongation factor, GreA/GreB, C-term LN920_01700 PF00497 Bacterial extracellular solute-binding proteins, family 3 LN920_01700 PF01464 Transglycosylase SLT domain LN920_01710 PF01171 PP-loop family LN920_01715 PF01464 Transglycosylase SLT domain LN920_01720 PF01435 Peptidase family M48 LN920_01735 PF03009 Glycerophosphoryl diester phosphodiesterase family LN920_01740 PF00753 Metallo-beta-lactamase superfamily LN920_01745 PF01219 Prokaryotic diacylglycerol kinase LN920_01750 PF00118 TCP-1/cpn60 chaperonin family LN920_01755 PF00166 Chaperonin 10 Kd subunit LN920_01765 PF00149 Calcineurin-like phosphoesterase LN920_01770 PF00781 Diacylglycerol kinase catalytic domain LN920_01775 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LN920_01775 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LN920_01780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LN920_01780 PF01266 FAD dependent oxidoreductase LN920_01785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LN920_01785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LN920_01790 PF00083 Sugar (and other) transporter LN920_01805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LN920_01805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LN920_01820 PF09423 PhoD-like phosphatase LN920_01820 PF16655 PhoD-like phosphatase, N-terminal domain LN920_01840 PF00809 Pterin binding enzyme LN920_01845 PF06480 FtsH Extracellular LN920_01845 PF17862 AAA+ lid domain LN920_01845 PF01434 Peptidase family M41 LN920_01845 PF00004 ATPase family associated with various cellular activities (AAA) LN920_01850 PF01728 FtsJ-like methyltransferase LN920_01855 PF01985 CRS1 / YhbY (CRM) domain LN920_01870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LN920_01870 PF00117 Glutamine amidotransferase class-I LN920_01875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_01875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LN920_01875 PF02142 MGS-like domain LN920_01880 PF01272 Transcription elongation factor, GreA/GreB, C-term LN920_01880 PF03449 Transcription elongation factor, N-terminal LN920_01885 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_01890 PF00582 Universal stress protein family LN920_01895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LN920_01905 PF09587 Bacterial capsule synthesis protein PGA_cap LN920_01920 PF00999 Sodium/hydrogen exchanger family LN920_01925 PF04228 Putative neutral zinc metallopeptidase LN920_01930 PF05661 Protein of unknown function (DUF808) LN920_01935 PF00579 tRNA synthetases class I (W and Y) LN920_01940 PF02629 CoA binding domain LN920_01940 PF00549 CoA-ligase LN920_01945 PF00549 CoA-ligase LN920_01945 PF08442 ATP-grasp domain LN920_01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_01950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LN920_01955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LN920_01955 PF00364 Biotin-requiring enzyme LN920_01955 PF02817 e3 binding domain LN920_01960 PF00676 Dehydrogenase E1 component LN920_01960 PF02779 Transketolase, pyrimidine binding domain LN920_01960 PF16870 2-oxoglutarate dehydrogenase C-terminal LN920_01960 PF16078 2-oxoglutarate dehydrogenase N-terminus LN920_01975 PF13085 2Fe-2S iron-sulfur cluster binding domain LN920_01980 PF02910 Fumarate reductase flavoprotein C-term LN920_01980 PF00890 FAD binding domain LN920_01985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LN920_01990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LN920_01995 PF00285 Citrate synthase, C-terminal domain LN920_02005 PF00581 Rhodanese-like domain LN920_02005 PF17773 UPF0176 acylphosphatase like domain LN920_02030 PF04546 Sigma-70, non-essential region LN920_02030 PF04545 Sigma-70, region 4 LN920_02030 PF04539 Sigma-70 region 3 LN920_02030 PF04542 Sigma-70 region 2 LN920_02030 PF00140 Sigma-70 factor, region 1.2 LN920_02030 PF03979 Sigma-70 factor, region 1.1 LN920_02035 PF04359 Protein of unknown function (DUF493) LN920_02040 PF03099 Biotin/lipoate A/B protein ligase family LN920_02050 PF00465 Iron-containing alcohol dehydrogenase LN920_02055 PF13520 Amino acid permease LN920_02060 PF03358 NADPH-dependent FMN reductase LN920_02065 PF01638 HxlR-like helix-turn-helix LN920_02070 PF00588 SpoU rRNA Methylase family LN920_02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN920_02075 PF14824 Sirohaem biosynthesis protein central LN920_02075 PF10414 Sirohaem synthase dimerisation region LN920_02080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN920_02080 PF02403 Seryl-tRNA synthetase N-terminal domain LN920_02090 PF03548 Outer membrane lipoprotein carrier protein LolA LN920_02095 PF01016 Ribosomal L27 protein LN920_02100 PF00829 Ribosomal prokaryotic L21 protein LN920_02110 PF00348 Polyprenyl synthetase LN920_02120 PF01569 PAP2 superfamily LN920_02125 PF00529 HlyD membrane-fusion protein of T1SS LN920_02125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_02130 PF00873 AcrB/AcrD/AcrF family LN920_02135 PF02321 Outer membrane efflux protein LN920_02140 PF01906 Putative heavy-metal-binding LN920_02145 PF01906 Putative heavy-metal-binding LN920_02165 PF08264 Anticodon-binding domain of tRNA LN920_02165 PF00133 tRNA synthetases class I (I, L, M and V) LN920_02165 PF10458 Valyl tRNA synthetase tRNA binding arm LN920_02185 PF03466 LysR substrate binding domain LN920_02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_02190 PF00909 Ammonium Transporter Family LN920_02200 PF08521 Two-component sensor kinase N-terminal LN920_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_02200 PF00512 His Kinase A (phospho-acceptor) domain LN920_02205 PF00486 Transcriptional regulatory protein, C terminal LN920_02205 PF00072 Response regulator receiver domain LN920_02210 PF08019 Phosphoethanolamine transferase EptA/EptB LN920_02210 PF00884 Sulfatase LN920_02230 PF01734 Patatin-like phospholipase LN920_02240 PF01145 SPFH domain / Band 7 family LN920_02245 PF04237 YjbR LN920_02250 PF00348 Polyprenyl synthetase LN920_02255 PF04303 PrpF protein LN920_02260 PF00324 Amino acid permease LN920_02270 PF01965 DJ-1/PfpI family LN920_02275 PF00698 Acyl transferase domain LN920_02275 PF08240 Alcohol dehydrogenase GroES-like domain LN920_02275 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_02275 PF08990 Erythronolide synthase docking LN920_02275 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_02275 PF00550 Phosphopantetheine attachment site LN920_02275 PF08659 KR domain LN920_02275 PF09277 Erythronolide synthase, docking LN920_02275 PF16197 Ketoacyl-synthetase C-terminal extension LN920_02275 PF14765 Polyketide synthase dehydratase LN920_02280 PF06719 AraC-type transcriptional regulator N-terminus LN920_02280 PF12833 Helix-turn-helix domain LN920_02285 PF02673 Bacitracin resistance protein BacA LN920_02305 PF02525 Flavodoxin-like fold LN920_02320 PF01507 Phosphoadenosine phosphosulfate reductase family LN920_02325 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LN920_02325 PF06974 Protein of unknown function (DUF1298) LN920_02335 PF10150 Ribonuclease E/G family LN920_02335 PF00575 S1 RNA binding domain LN920_02340 PF02545 Maf-like protein LN920_02345 PF04093 rod shape-determining protein MreD LN920_02350 PF04085 rod shape-determining protein MreC LN920_02360 PF02686 Glu-tRNAGln amidotransferase C subunit LN920_02365 PF01425 Amidase LN920_02370 PF02637 GatB domain LN920_02370 PF02934 GatB/GatE catalytic domain LN920_02400 PF05992 SbmA/BacA-like family LN920_02405 PF13291 ACT domain LN920_02405 PF00291 Pyridoxal-phosphate dependent enzyme LN920_02410 PF01734 Patatin-like phospholipase LN920_02415 PF01235 Sodium:alanine symporter family LN920_02430 PF00881 Nitroreductase family LN920_02435 PF07690 Major Facilitator Superfamily LN920_02440 PF12805 FUSC-like inner membrane protein yccS LN920_02450 PF00258 Flavodoxin LN920_02450 PF00175 Oxidoreductase NAD-binding domain LN920_02450 PF00667 FAD binding domain LN920_02490 PF17969 L,D-transpeptidase C-terminal domain LN920_02490 PF03734 L,D-transpeptidase catalytic domain LN920_02495 PF04304 Protein of unknown function (DUF454) LN920_02505 PF08085 Entericidin EcnA/B family LN920_02510 PF01546 Peptidase family M20/M25/M40 LN920_02510 PF07687 Peptidase dimerisation domain LN920_02520 PF01627 Hpt domain LN920_02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_02520 PF01584 CheW-like domain LN920_02520 PF00072 Response regulator receiver domain LN920_02525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LN920_02525 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LN920_02535 PF00072 Response regulator receiver domain LN920_02540 PF00072 Response regulator receiver domain LN920_02555 PF00873 AcrB/AcrD/AcrF family LN920_02560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN920_02560 PF04073 Aminoacyl-tRNA editing domain LN920_02560 PF03129 Anticodon binding domain LN920_02565 PF07411 Domain of unknown function (DUF1508) LN920_02570 PF03831 PhnA domain LN920_02570 PF08274 PhnA Zinc-Ribbon LN920_02575 PF04343 Protein of unknown function, DUF488 LN920_02585 PF01571 Aminomethyltransferase folate-binding domain LN920_02590 PF10411 Disulfide bond isomerase protein N-terminus LN920_02590 PF13098 Thioredoxin-like domain LN920_02600 PF03547 Membrane transport protein LN920_02605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_02610 PF00593 TonB dependent receptor LN920_02610 PF07715 TonB-dependent Receptor Plug Domain LN920_02615 PF02245 Methylpurine-DNA glycosylase (MPG) LN920_02620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LN920_02620 PF06827 Zinc finger found in FPG and IleRS LN920_02620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LN920_02635 PF01741 Large-conductance mechanosensitive channel, MscL LN920_02640 PF00679 Elongation factor G C-terminus LN920_02640 PF00009 Elongation factor Tu GTP binding domain LN920_02640 PF03144 Elongation factor Tu domain 2 LN920_02645 PF00860 Permease family LN920_02650 PF05175 Methyltransferase small domain LN920_02650 PF08468 Methyltransferase small domain N-terminal LN920_02655 PF00324 Amino acid permease LN920_02660 PF01139 tRNA-splicing ligase RtcB LN920_02670 PF13505 Outer membrane protein beta-barrel domain LN920_02670 PF00691 OmpA family LN920_02680 PF02803 Thiolase, C-terminal domain LN920_02680 PF00108 Thiolase, N-terminal domain LN920_02690 PF00893 Small Multidrug Resistance protein LN920_02705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LN920_02705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LN920_02710 PF01011 PQQ enzyme repeat LN920_02715 PF04966 Carbohydrate-selective porin, OprB family LN920_02720 PF02515 CoA-transferase family III LN920_02725 PF02311 AraC-like ligand binding domain LN920_02725 PF12833 Helix-turn-helix domain LN920_02730 PF02803 Thiolase, C-terminal domain LN920_02730 PF00108 Thiolase, N-terminal domain LN920_02735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LN920_02735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LN920_02735 PF00378 Enoyl-CoA hydratase/isomerase LN920_02760 PF03006 Haemolysin-III related LN920_02765 PF07690 Major Facilitator Superfamily LN920_02765 PF00083 Sugar (and other) transporter LN920_02780 PF10417 C-terminal domain of 1-Cys peroxiredoxin LN920_02780 PF00578 AhpC/TSA family LN920_02785 PF00753 Metallo-beta-lactamase superfamily LN920_02800 PF02875 Mur ligase family, glutamate ligase domain LN920_02800 PF08245 Mur ligase middle domain LN920_02805 PF01039 Carboxyl transferase domain LN920_02810 PF00290 Tryptophan synthase alpha chain LN920_02835 PF00291 Pyridoxal-phosphate dependent enzyme LN920_02840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LN920_02845 PF07715 TonB-dependent Receptor Plug Domain LN920_02845 PF00593 TonB dependent receptor LN920_02850 PF01923 Cobalamin adenosyltransferase LN920_02870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LN920_02875 PF00486 Transcriptional regulatory protein, C terminal LN920_02875 PF00072 Response regulator receiver domain LN920_02880 PF00672 HAMP domain LN920_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_02880 PF00512 His Kinase A (phospho-acceptor) domain LN920_02890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_02890 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_02890 PF12806 Acetyl-CoA dehydrogenase C-terminal like LN920_02895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_02895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_02895 PF12806 Acetyl-CoA dehydrogenase C-terminal like LN920_02895 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_02900 PF03466 LysR substrate binding domain LN920_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_02905 PF02798 Glutathione S-transferase, N-terminal domain LN920_02905 PF00043 Glutathione S-transferase, C-terminal domain LN920_02910 PF06146 Phosphate-starvation-inducible E LN920_02930 PF07715 TonB-dependent Receptor Plug Domain LN920_02930 PF00593 TonB dependent receptor LN920_02940 PF01336 OB-fold nucleic acid binding domain LN920_02940 PF02938 GAD domain LN920_02940 PF00152 tRNA synthetases class II (D, K and N) LN920_02945 PF17101 Stealth protein CR1, conserved region 1 LN920_02945 PF11380 Stealth protein CR2, conserved region 2 LN920_02945 PF17102 Stealth protein CR3, conserved region 3 LN920_02970 PF13439 Glycosyltransferase Family 4 LN920_02970 PF00534 Glycosyl transferases group 1 LN920_02975 PF00535 Glycosyl transferase family 2 LN920_02980 PF01522 Polysaccharide deacetylase LN920_02995 PF01063 Amino-transferase class IV LN920_03000 PF03710 Glutamate-ammonia ligase adenylyltransferase LN920_03000 PF08335 GlnD PII-uridylyltransferase LN920_03005 PF07689 KaiB domain LN920_03005 PF00512 His Kinase A (phospho-acceptor) domain LN920_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_03035 PF02547 Queuosine biosynthesis protein LN920_03050 PF01702 Queuine tRNA-ribosyltransferase LN920_03055 PF02699 Preprotein translocase subunit LN920_03060 PF02355 Protein export membrane protein LN920_03060 PF13721 SecD export protein N-terminal TM region LN920_03060 PF07549 SecD/SecF GG Motif LN920_03065 PF02355 Protein export membrane protein LN920_03065 PF07549 SecD/SecF GG Motif LN920_03070 PF02441 Flavoprotein LN920_03070 PF04127 DNA / pantothenate metabolism flavoprotein LN920_03075 PF04002 RadC-like JAB domain LN920_03080 PF01062 Bestrophin, RFP-TM, chloride channel LN920_03085 PF02811 PHP domain LN920_03090 PF04279 Intracellular septation protein A LN920_03095 PF03795 YCII-related domain LN920_03105 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LN920_03105 PF01266 FAD dependent oxidoreductase LN920_03115 PF04461 Protein of unknown function (DUF520) LN920_03125 PF03061 Thioesterase superfamily LN920_03130 PF00085 Thioredoxin LN920_03135 PF00561 alpha/beta hydrolase fold LN920_03140 PF04273 Putative phosphatase (DUF442) LN920_03140 PF00753 Metallo-beta-lactamase superfamily LN920_03150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LN920_03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_03185 PF00990 Diguanylate cyclase, GGDEF domain LN920_03185 PF17152 Periplasmic sensor domain LN920_03190 PF01389 OmpA-like transmembrane domain LN920_03190 PF00691 OmpA family LN920_03195 PF10518 TAT (twin-arginine translocation) pathway signal sequence LN920_03195 PF00149 Calcineurin-like phosphoesterase LN920_03200 PF13091 PLD-like domain LN920_03210 PF13167 GTP-binding GTPase N-terminal LN920_03210 PF16360 GTP-binding GTPase Middle Region LN920_03210 PF01926 50S ribosome-binding GTPase LN920_03340 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LN920_03515 PF00145 C-5 cytosine-specific DNA methylase LN920_03530 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT LN920_03535 PF01726 LexA DNA binding domain LN920_03535 PF00717 Peptidase S24-like LN920_03605 PF00149 Calcineurin-like phosphoesterase LN920_03610 PF00398 Ribosomal RNA adenine dimethylase LN920_03615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LN920_03620 PF00572 Ribosomal protein L13 LN920_03625 PF00380 Ribosomal protein S9/S16 LN920_03630 PF13417 Glutathione S-transferase, N-terminal domain LN920_03630 PF00043 Glutathione S-transferase, C-terminal domain LN920_03635 PF04386 Stringent starvation protein B LN920_03645 PF02785 Biotin carboxylase C-terminal domain LN920_03645 PF00289 Biotin carboxylase, N-terminal domain LN920_03645 PF00364 Biotin-requiring enzyme LN920_03645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_03655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_03655 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_03655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_03660 PF01039 Carboxyl transferase domain LN920_03675 PF17932 Tetracyclin repressor-like, C-terminal domain LN920_03675 PF00440 Bacterial regulatory proteins, tetR family LN920_03680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_03680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_03680 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_03725 PF01066 CDP-alcohol phosphatidyltransferase LN920_03730 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LN920_03755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LN920_03755 PF00056 lactate/malate dehydrogenase, NAD binding domain LN920_03765 PF01464 Transglycosylase SLT domain LN920_03765 PF01551 Peptidase family M23 LN920_03765 PF10145 Phage-related minor tail protein LN920_03770 PF00919 Uncharacterized protein family UPF0004 LN920_03770 PF01938 TRAM domain LN920_03770 PF04055 Radical SAM superfamily LN920_03775 PF02562 PhoH-like protein LN920_03780 PF02130 Uncharacterized protein family UPF0054 LN920_03805 PF03358 NADPH-dependent FMN reductase LN920_03810 PF03631 Virulence factor BrkB LN920_03815 PF00892 EamA-like transporter family LN920_03820 PF12833 Helix-turn-helix domain LN920_03825 PF01557 Fumarylacetoacetate (FAA) hydrolase family LN920_03870 PF17876 Cold shock domain LN920_03870 PF08461 Ribonuclease R winged-helix domain LN920_03870 PF08206 Ribonuclease B OB domain LN920_03870 PF00773 RNB domain LN920_03870 PF00575 S1 RNA binding domain LN920_03875 PF01432 Peptidase family M3 LN920_03880 PF09526 Probable metal-binding protein (DUF2387) LN920_03910 PF03937 Flavinator of succinate dehydrogenase LN920_03915 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_03915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_03915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_03920 PF00743 Flavin-binding monooxygenase-like LN920_03925 PF01196 Ribosomal protein L17 LN920_03930 PF01000 RNA polymerase Rpb3/RpoA insert domain LN920_03930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LN920_03930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LN920_03935 PF01479 S4 domain LN920_03935 PF00163 Ribosomal protein S4/S9 N-terminal domain LN920_03940 PF00411 Ribosomal protein S11 LN920_03945 PF00416 Ribosomal protein S13/S18 LN920_03950 PF00444 Ribosomal protein L36 LN920_03955 PF00344 SecY translocase LN920_03960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LN920_03965 PF00327 Ribosomal protein L30p/L7e LN920_03970 PF03719 Ribosomal protein S5, C-terminal domain LN920_03970 PF00333 Ribosomal protein S5, N-terminal domain LN920_03975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LN920_03980 PF00347 Ribosomal protein L6 LN920_03985 PF00410 Ribosomal protein S8 LN920_03990 PF00253 Ribosomal protein S14p/S29e LN920_03995 PF00673 ribosomal L5P family C-terminus LN920_03995 PF00281 Ribosomal protein L5 LN920_04000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LN920_04000 PF00467 KOW motif LN920_04005 PF00238 Ribosomal protein L14p/L23e LN920_04010 PF00366 Ribosomal protein S17 LN920_04015 PF00831 Ribosomal L29 protein LN920_04020 PF00252 Ribosomal protein L16p/L10e LN920_04030 PF00237 Ribosomal protein L22p/L17e LN920_04035 PF00203 Ribosomal protein S19 LN920_04040 PF03947 Ribosomal Proteins L2, C-terminal domain LN920_04040 PF00181 Ribosomal Proteins L2, RNA binding domain LN920_04045 PF00276 Ribosomal protein L23 LN920_04050 PF00573 Ribosomal protein L4/L1 family LN920_04055 PF00297 Ribosomal protein L3 LN920_04060 PF00338 Ribosomal protein S10p/S20e LN920_04065 PF00117 Glutamine amidotransferase class-I LN920_04070 PF01053 Cys/Met metabolism PLP-dependent enzyme LN920_04075 PF05872 Bacterial protein of unknown function (DUF853) LN920_04080 PF00970 Oxidoreductase FAD-binding domain LN920_04080 PF00042 Globin LN920_04080 PF00175 Oxidoreductase NAD-binding domain LN920_04085 PF02082 Transcriptional regulator LN920_04090 PF01926 50S ribosome-binding GTPase LN920_04100 PF00375 Sodium:dicarboxylate symporter family LN920_04110 PF01553 Acyltransferase LN920_04125 PF00271 Helicase conserved C-terminal domain LN920_04125 PF00270 DEAD/DEAH box helicase LN920_04125 PF17191 RecG wedge domain LN920_04130 PF00156 Phosphoribosyl transferase domain LN920_04135 PF00293 NUDIX domain LN920_04140 PF03641 Possible lysine decarboxylase LN920_04145 PF01544 CorA-like Mg2+ transporter protein LN920_04155 PF05494 MlaC protein LN920_04165 PF02405 Permease MlaE LN920_04170 PF00005 ABC transporter LN920_04180 PF00271 Helicase conserved C-terminal domain LN920_04180 PF03880 DbpA RNA binding domain LN920_04180 PF12343 Cold shock protein DEAD box A LN920_04180 PF00270 DEAD/DEAH box helicase LN920_04185 PF00459 Inositol monophosphatase family LN920_04190 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LN920_04190 PF02779 Transketolase, pyrimidine binding domain LN920_04190 PF02780 Transketolase, C-terminal domain LN920_04195 PF00925 GTP cyclohydrolase II LN920_04200 PF01218 Coproporphyrinogen III oxidase LN920_04205 PF08501 Shikimate dehydrogenase substrate binding domain LN920_04205 PF01488 Shikimate / quinate 5-dehydrogenase LN920_04205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LN920_04215 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_04215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_04215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_04215 PF12806 Acetyl-CoA dehydrogenase C-terminal like LN920_04225 PF04024 PspC domain LN920_04230 PF00571 CBS domain LN920_04255 PF02091 Glycyl-tRNA synthetase alpha subunit LN920_04260 PF05746 DALR anticodon binding domain LN920_04260 PF02092 Glycyl-tRNA synthetase beta subunit LN920_04270 PF00892 EamA-like transporter family LN920_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_04275 PF03466 LysR substrate binding domain LN920_04290 PF05922 Peptidase inhibitor I9 LN920_04290 PF00082 Subtilase family LN920_04305 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LN920_04310 PF04996 Succinylarginine dihydrolase LN920_04315 PF00171 Aldehyde dehydrogenase family LN920_04320 PF04958 Arginine N-succinyltransferase beta subunit LN920_04325 PF00202 Aminotransferase class-III LN920_04330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LN920_04330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LN920_04335 PF00324 Amino acid permease LN920_04365 PF13614 AAA domain LN920_04370 PF01594 AI-2E family transporter LN920_04375 PF00080 Copper/zinc superoxide dismutase (SODC) LN920_04380 PF12805 FUSC-like inner membrane protein yccS LN920_04385 PF07690 Major Facilitator Superfamily LN920_04395 PF02525 Flavodoxin-like fold LN920_04400 PF03992 Antibiotic biosynthesis monooxygenase LN920_04410 PF02913 FAD linked oxidases, C-terminal domain LN920_04410 PF01565 FAD binding domain LN920_04415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN920_04415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN920_04420 PF00892 EamA-like transporter family LN920_04425 PF00892 EamA-like transporter family LN920_04435 PF01925 Sulfite exporter TauE/SafE LN920_04440 PF01509 TruB family pseudouridylate synthase (N terminal domain) LN920_04440 PF16198 tRNA pseudouridylate synthase B C-terminal domain LN920_04440 PF09157 Pseudouridine synthase II TruB, C-terminal LN920_04445 PF03280 Proteobacterial lipase chaperone protein LN920_04450 PF00561 alpha/beta hydrolase fold LN920_04455 PF01245 Ribosomal protein L19 LN920_04460 PF01746 tRNA (Guanine-1)-methyltransferase LN920_04465 PF05239 PRC-barrel domain LN920_04465 PF01782 RimM N-terminal domain LN920_04470 PF00886 Ribosomal protein S16 LN920_04510 PF02401 LytB protein LN920_04515 PF00625 Guanylate kinase LN920_04520 PF01192 RNA polymerase Rpb6 LN920_04530 PF13291 ACT domain LN920_04530 PF04607 Region found in RelA / SpoT proteins LN920_04530 PF02824 TGS domain LN920_04535 PF01042 Endoribonuclease L-PSP LN920_04540 PF04324 BFD-like [2Fe-2S] binding domain LN920_04545 PF00210 Ferritin-like domain LN920_04550 PF11846 Virulence factor membrane-bound polymerase, C-terminal LN920_04550 PF15864 Protein glycosylation ligase LN920_04550 PF04932 O-Antigen ligase LN920_04560 PF07963 Prokaryotic N-terminal methylation motif LN920_04560 PF00114 Pilin (bacterial filament) LN920_04570 PF04536 TPM domain LN920_04575 PF04011 LemA family LN920_04585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LN920_04585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_04590 PF00310 Glutamine amidotransferases class-II LN920_04590 PF01645 Conserved region in glutamate synthase LN920_04590 PF01493 GXGXG motif LN920_04590 PF04898 Glutamate synthase central domain LN920_04600 PF01761 3-dehydroquinate synthase LN920_04605 PF01202 Shikimate kinase LN920_04610 PF11741 AMIN domain LN920_04610 PF00263 Bacterial type II and III secretion system protein LN920_04610 PF03958 Bacterial type II/III secretion system short domain LN920_04610 PF07660 Secretin and TonB N terminus short domain LN920_04620 PF04350 Pilus assembly protein, PilO LN920_04625 PF05137 Fimbrial assembly protein (PilN) LN920_04630 PF11104 Type IV pilus assembly protein PilM; LN920_04635 PF00905 Penicillin binding protein transpeptidase domain LN920_04635 PF00912 Transglycosylase LN920_04635 PF17092 Penicillin-binding protein OB-like domain LN920_04640 PF13847 Methyltransferase domain LN920_04650 PF00953 Glycosyl transferase family 4 LN920_04655 PF01225 Mur ligase family, catalytic domain LN920_04655 PF02875 Mur ligase family, glutamate ligase domain LN920_04655 PF08245 Mur ligase middle domain LN920_04660 PF01225 Mur ligase family, catalytic domain LN920_04660 PF02875 Mur ligase family, glutamate ligase domain LN920_04660 PF08245 Mur ligase middle domain LN920_04665 PF03717 Penicillin-binding Protein dimerisation domain LN920_04665 PF00905 Penicillin binding protein transpeptidase domain LN920_04675 PF01795 MraW methylase family LN920_04690 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN920_04705 PF00324 Amino acid permease LN920_04735 PF01545 Cation efflux family LN920_04740 PF00873 AcrB/AcrD/AcrF family LN920_04745 PF00529 HlyD membrane-fusion protein of T1SS LN920_04745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_04765 PF04191 Phospholipid methyltransferase LN920_04790 PF12848 ABC transporter LN920_04790 PF00005 ABC transporter LN920_04795 PF01053 Cys/Met metabolism PLP-dependent enzyme LN920_04800 PF00106 short chain dehydrogenase LN920_04805 PF01740 STAS domain LN920_04805 PF00916 Sulfate permease family LN920_04810 PF16921 Tex protein YqgF-like domain LN920_04810 PF09371 Tex-like protein N-terminal domain LN920_04810 PF17674 HHH domain LN920_04810 PF00575 S1 RNA binding domain LN920_04815 PF00072 Response regulator receiver domain LN920_04815 PF00486 Transcriptional regulatory protein, C terminal LN920_04820 PF00672 HAMP domain LN920_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_04820 PF00512 His Kinase A (phospho-acceptor) domain LN920_04830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LN920_04830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LN920_04835 PF00583 Acetyltransferase (GNAT) family LN920_04855 PF00475 Imidazoleglycerol-phosphate dehydratase LN920_04860 PF00117 Glutamine amidotransferase class-I LN920_04875 PF00977 Histidine biosynthesis protein LN920_04890 PF03992 Antibiotic biosynthesis monooxygenase LN920_04905 PF01636 Phosphotransferase enzyme family LN920_04910 PF00977 Histidine biosynthesis protein LN920_04925 PF00230 Major intrinsic protein LN920_04950 PF02705 K+ potassium transporter LN920_04970 PF02525 Flavodoxin-like fold LN920_04975 PF01638 HxlR-like helix-turn-helix LN920_05005 PF02311 AraC-like ligand binding domain LN920_05005 PF12833 Helix-turn-helix domain LN920_05010 PF00248 Aldo/keto reductase family LN920_05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_05030 PF03466 LysR substrate binding domain LN920_05035 PF07690 Major Facilitator Superfamily LN920_05055 PF01593 Flavin containing amine oxidoreductase LN920_05060 PF05726 Pirin C-terminal cupin domain LN920_05060 PF02678 Pirin LN920_05065 PF00857 Isochorismatase family LN920_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_05075 PF00171 Aldehyde dehydrogenase family LN920_05080 PF00202 Aminotransferase class-III LN920_05085 PF00155 Aminotransferase class I and II LN920_05085 PF00392 Bacterial regulatory proteins, gntR family LN920_05090 PF00324 Amino acid permease LN920_05100 PF03591 AzlC protein LN920_05110 PF00436 Single-strand binding protein family LN920_05115 PF07690 Major Facilitator Superfamily LN920_05125 PF03070 TENA/THI-4/PQQC family LN920_05125 PF08543 Phosphomethylpyrimidine kinase LN920_05125 PF02581 Thiamine monophosphate synthase LN920_05130 PF06942 GlpM protein LN920_05140 PF08240 Alcohol dehydrogenase GroES-like domain LN920_05140 PF00107 Zinc-binding dehydrogenase LN920_05145 PF16925 Tetracyclin repressor-like, C-terminal domain LN920_05145 PF00440 Bacterial regulatory proteins, tetR family LN920_05150 PF00005 ABC transporter LN920_05150 PF17755 UvrA DNA-binding domain LN920_05150 PF17760 UvrA interaction domain LN920_05160 PF00990 Diguanylate cyclase, GGDEF domain LN920_05170 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_05180 PF00474 Sodium:solute symporter family LN920_05185 PF04341 Protein of unknown function, DUF485 LN920_05200 PF00196 Bacterial regulatory proteins, luxR family LN920_05200 PF00072 Response regulator receiver domain LN920_05205 PF03358 NADPH-dependent FMN reductase LN920_05210 PF00296 Luciferase-like monooxygenase LN920_05215 PF00872 Transposase, Mutator family LN920_05220 PF01037 Lrp/AsnC ligand binding domain LN920_05225 PF00857 Isochorismatase family LN920_05230 PF00501 AMP-binding enzyme LN920_05230 PF13193 AMP-binding enzyme C-terminal domain LN920_05230 PF16177 Acetyl-coenzyme A synthetase N-terminus LN920_05240 PF00924 Mechanosensitive ion channel LN920_05245 PF04452 RNA methyltransferase LN920_05250 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LN920_05255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_05275 PF17768 RecJ OB domain LN920_05275 PF02272 DHHA1 domain LN920_05275 PF01368 DHH family LN920_05280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LN920_05280 PF01243 Pyridoxamine 5'-phosphate oxidase LN920_05285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN920_05285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN920_05285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN920_05285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN920_05290 PF00571 CBS domain LN920_05290 PF00478 IMP dehydrogenase / GMP reductase domain LN920_05295 PF03692 Putative zinc- or iron-chelating domain LN920_05300 PF01613 Flavin reductase like domain LN920_05300 PF00258 Flavodoxin LN920_05305 PF07715 TonB-dependent Receptor Plug Domain LN920_05305 PF00593 TonB dependent receptor LN920_05310 PF01169 Uncharacterized protein family UPF0016 LN920_05320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LN920_05320 PF00364 Biotin-requiring enzyme LN920_05320 PF02817 e3 binding domain LN920_05325 PF00456 Transketolase, thiamine diphosphate binding domain LN920_05325 PF17831 Pyruvate dehydrogenase E1 component middle domain LN920_05330 PF01551 Peptidase family M23 LN920_05340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LN920_05345 PF12327 FtsZ family, C-terminal domain LN920_05345 PF00091 Tubulin/FtsZ family, GTPase domain LN920_05350 PF02491 SHS2 domain inserted in FTSA LN920_05355 PF08478 POTRA domain, FtsQ-type LN920_05355 PF03799 Cell division protein FtsQ LN920_05360 PF07478 D-ala D-ala ligase C-terminus LN920_05360 PF01820 D-ala D-ala ligase N-terminus LN920_05365 PF01225 Mur ligase family, catalytic domain LN920_05365 PF02875 Mur ligase family, glutamate ligase domain LN920_05365 PF08245 Mur ligase middle domain LN920_05370 PF03033 Glycosyltransferase family 28 N-terminal domain LN920_05370 PF04101 Glycosyltransferase family 28 C-terminal domain LN920_05375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LN920_05375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LN920_05385 PF07715 TonB-dependent Receptor Plug Domain LN920_05385 PF00593 TonB dependent receptor LN920_05390 PF00156 Phosphoribosyl transferase domain LN920_05395 PF03372 Endonuclease/Exonuclease/phosphatase family LN920_05400 PF03960 ArsC family LN920_05410 PF07859 alpha/beta hydrolase fold LN920_05415 PF00990 Diguanylate cyclase, GGDEF domain LN920_05415 PF07694 5TMR of 5TMR-LYT LN920_05450 PF00576 HIUase/Transthyretin family LN920_05455 PF00860 Permease family LN920_05465 PF01494 FAD binding domain LN920_05470 PF03561 Allantoicase repeat LN920_05475 PF04115 Ureidoglycolate lyase LN920_05480 PF00106 short chain dehydrogenase LN920_05485 PF00204 DNA gyrase B LN920_05485 PF00986 DNA gyrase B subunit, carboxyl terminus LN920_05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_05485 PF01751 Toprim domain LN920_05490 PF05728 Uncharacterised protein family (UPF0227) LN920_05505 PF01476 LysM domain LN920_05505 PF00877 NlpC/P60 family LN920_05510 PF13296 Putative type VI secretion system Rhs element Vgr LN920_05510 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LN920_05510 PF04717 Type VI secretion system, phage-baseplate injector LN920_05515 PF02600 Disulfide bond formation protein DsbB LN920_05520 PF04262 Glutamate-cysteine ligase LN920_05535 PF04286 Protein of unknown function (DUF445) LN920_05540 PF00155 Aminotransferase class I and II LN920_05545 PF01554 MatE LN920_05550 PF00106 short chain dehydrogenase LN920_05560 PF00072 Response regulator receiver domain LN920_05560 PF00486 Transcriptional regulatory protein, C terminal LN920_05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_05565 PF00512 His Kinase A (phospho-acceptor) domain LN920_05565 PF00989 PAS fold LN920_05565 PF11808 Phosphate regulon sensor protein PhoR LN920_05585 PF03069 Acetamidase/Formamidase family LN920_05590 PF02666 Phosphatidylserine decarboxylase LN920_05595 PF00581 Rhodanese-like domain LN920_05600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LN920_05600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LN920_05605 PF02580 D-Tyr-tRNA(Tyr) deacylase LN920_05630 PF00925 GTP cyclohydrolase II LN920_05630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LN920_05635 PF00885 6,7-dimethyl-8-ribityllumazine synthase LN920_05640 PF01029 NusB family LN920_05645 PF02769 AIR synthase related protein, C-terminal domain LN920_05645 PF00586 AIR synthase related protein, N-terminal domain LN920_05650 PF04608 Phosphatidylglycerophosphatase A LN920_05655 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_05655 PF14602 Hexapeptide repeat of succinyl-transferase LN920_05655 PF12804 MobA-like NTP transferase domain LN920_05660 PF01380 SIS domain LN920_05665 PF01177 Asp/Glu/Hydantoin racemase LN920_05680 PF00491 Arginase family LN920_05685 PF01979 Amidohydrolase family LN920_05690 PF00324 Amino acid permease LN920_05695 PF00221 Aromatic amino acid lyase LN920_05700 PF01175 Urocanase Rossmann-like domain LN920_05700 PF17392 Urocanase C-terminal domain LN920_05700 PF17391 Urocanase N-terminal domain LN920_05705 PF05962 HutD LN920_05710 PF00392 Bacterial regulatory proteins, gntR family LN920_05710 PF07702 UTRA domain LN920_05720 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN920_05720 PF07683 Cobalamin synthesis protein cobW C-terminal domain LN920_05730 PF00324 Amino acid permease LN920_05740 PF02798 Glutathione S-transferase, N-terminal domain LN920_05740 PF14497 Glutathione S-transferase, C-terminal domain LN920_05745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LN920_05755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LN920_05760 PF04463 Protein of unknown function (DUF523) LN920_05765 PF01554 MatE LN920_05770 PF01758 Sodium Bile acid symporter family LN920_05775 PF00857 Isochorismatase family LN920_05780 PF00701 Dihydrodipicolinate synthetase family LN920_05790 PF01259 SAICAR synthetase LN920_05800 PF01226 Formate/nitrite transporter LN920_05805 PF00004 ATPase family associated with various cellular activities (AAA) LN920_05805 PF16193 AAA C-terminal domain LN920_05805 PF12002 MgsA AAA+ ATPase C terminal LN920_05810 PF07995 Glucose / Sorbosone dehydrogenase LN920_05815 PF03692 Putative zinc- or iron-chelating domain LN920_05820 PF07043 Protein of unknown function (DUF1328) LN920_05835 PF10576 Iron-sulfur binding domain of endonuclease III LN920_05835 PF00633 Helix-hairpin-helix motif LN920_05835 PF00730 HhH-GPD superfamily base excision DNA repair protein LN920_05835 PF14815 NUDIX domain LN920_05850 PF03352 Methyladenine glycosylase LN920_05855 PF08240 Alcohol dehydrogenase GroES-like domain LN920_05855 PF00107 Zinc-binding dehydrogenase LN920_05860 PF00155 Aminotransferase class I and II LN920_05860 PF00392 Bacterial regulatory proteins, gntR family LN920_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_05875 PF03466 LysR substrate binding domain LN920_05880 PF00248 Aldo/keto reductase family LN920_05885 PF07690 Major Facilitator Superfamily LN920_05895 PF05173 Dihydrodipicolinate reductase, C-terminus LN920_05895 PF01113 Dihydrodipicolinate reductase, N-terminus LN920_05905 PF00226 DnaJ domain LN920_05905 PF01556 DnaJ C terminal domain LN920_05905 PF00684 DnaJ central domain LN920_05915 PF00873 AcrB/AcrD/AcrF family LN920_05920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_05925 PF00440 Bacterial regulatory proteins, tetR family LN920_05925 PF08361 MAATS-type transcriptional repressor, C-terminal region LN920_05930 PF00311 Phosphoenolpyruvate carboxylase LN920_05935 PF00860 Permease family LN920_05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_05940 PF03466 LysR substrate binding domain LN920_05955 PF00920 Dehydratase family LN920_05960 PF02911 Formyl transferase, C-terminal domain LN920_05960 PF00551 Formyl transferase LN920_05965 PF01189 16S rRNA methyltransferase RsmB/F LN920_05965 PF01029 NusB family LN920_05975 PF00209 Sodium:neurotransmitter symporter family LN920_06015 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LN920_06020 PF07859 alpha/beta hydrolase fold LN920_06040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_06040 PF03466 LysR substrate binding domain LN920_06045 PF01025 GrpE LN920_06050 PF00012 Hsp70 protein LN920_06070 PF13406 Transglycosylase SLT domain LN920_06075 PF02222 ATP-grasp domain LN920_06075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LN920_06080 PF00731 AIR carboxylase LN920_06090 PF01225 Mur ligase family, catalytic domain LN920_06090 PF02875 Mur ligase family, glutamate ligase domain LN920_06090 PF08245 Mur ligase middle domain LN920_06100 PF01569 PAP2 superfamily LN920_06105 PF03741 Integral membrane protein TerC family LN920_06115 PF03738 Glutathionylspermidine synthase preATP-grasp LN920_06120 PF00355 Rieske [2Fe-2S] domain LN920_06125 PF01979 Amidohydrolase family LN920_06130 PF00156 Phosphoribosyl transferase domain LN920_06140 PF10411 Disulfide bond isomerase protein N-terminus LN920_06140 PF13098 Thioredoxin-like domain LN920_06145 PF01545 Cation efflux family LN920_06145 PF16916 Dimerisation domain of Zinc Transporter LN920_06150 PF02583 Metal-sensitive transcriptional repressor LN920_06155 PF01926 50S ribosome-binding GTPase LN920_06155 PF12631 MnmE helical domain LN920_06155 PF10396 GTP-binding protein TrmE N-terminus LN920_06160 PF14849 YidC periplasmic domain LN920_06160 PF02096 60Kd inner membrane protein LN920_06165 PF01809 Putative membrane protein insertion efficiency factor LN920_06170 PF00825 Ribonuclease P LN920_06175 PF00468 Ribosomal protein L34 LN920_06180 PF00308 Bacterial dnaA protein LN920_06180 PF08299 Bacterial dnaA protein helix-turn-helix LN920_06180 PF11638 DnaA N-terminal domain LN920_06185 PF00712 DNA polymerase III beta subunit, N-terminal domain LN920_06185 PF02767 DNA polymerase III beta subunit, central domain LN920_06185 PF02768 DNA polymerase III beta subunit, C-terminal domain LN920_06190 PF02463 RecF/RecN/SMC N terminal domain LN920_06195 PF01751 Toprim domain LN920_06195 PF00204 DNA gyrase B LN920_06195 PF00986 DNA gyrase B subunit, carboxyl terminus LN920_06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_06195 PF18053 DNA gyrase B subunit insert domain LN920_06205 PF09335 SNARE associated Golgi protein LN920_06210 PF12848 ABC transporter LN920_06210 PF00005 ABC transporter LN920_06230 PF01521 Iron-sulphur cluster biosynthesis LN920_06240 PF03702 Anhydro-N-acetylmuramic acid kinase LN920_06245 PF00579 tRNA synthetases class I (W and Y) LN920_06285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_06290 PF01252 Signal peptidase (SPase) II LN920_06295 PF00133 tRNA synthetases class I (I, L, M and V) LN920_06295 PF06827 Zinc finger found in FPG and IleRS LN920_06295 PF08264 Anticodon-binding domain of tRNA LN920_06300 PF06574 FAD synthetase LN920_06300 PF01687 Riboflavin kinase LN920_06310 PF01048 Phosphorylase superfamily LN920_06315 PF08362 YcdC-like protein, C-terminal region LN920_06315 PF00440 Bacterial regulatory proteins, tetR family LN920_06320 PF00005 ABC transporter LN920_06325 PF00528 Binding-protein-dependent transport system inner membrane component LN920_06330 PF00296 Luciferase-like monooxygenase LN920_06335 PF09084 NMT1/THI5 like LN920_06340 PF09084 NMT1/THI5 like LN920_06345 PF00696 Amino acid kinase family LN920_06345 PF00583 Acetyltransferase (GNAT) family LN920_06360 PF00106 short chain dehydrogenase LN920_06365 PF13419 Haloacid dehalogenase-like hydrolase LN920_06375 PF01323 DSBA-like thioredoxin domain LN920_06380 PF00440 Bacterial regulatory proteins, tetR family LN920_06380 PF08360 QacR-like protein, C-terminal region LN920_06385 PF00440 Bacterial regulatory proteins, tetR family LN920_06390 PF00175 Oxidoreductase NAD-binding domain LN920_06395 PF00487 Fatty acid desaturase LN920_06400 PF03725 3' exoribonuclease family, domain 2 LN920_06400 PF01138 3' exoribonuclease family, domain 1 LN920_06420 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LN920_06420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LN920_06425 PF01510 N-acetylmuramoyl-L-alanine amidase LN920_06430 PF03023 Lipid II flippase MurJ LN920_06435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_06435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LN920_06440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_06440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LN920_06445 PF13614 AAA domain LN920_06445 PF13807 G-rich domain on putative tyrosine kinase LN920_06445 PF02706 Chain length determinant protein LN920_06450 PF01451 Low molecular weight phosphotyrosine protein phosphatase LN920_06455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LN920_06455 PF10531 SLBB domain LN920_06455 PF02563 Polysaccharide biosynthesis/export protein LN920_06460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LN920_06460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LN920_06460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LN920_06465 PF02719 Polysaccharide biosynthesis protein LN920_06470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LN920_06475 PF02348 Cytidylyltransferase LN920_06490 PF08666 SAF domain LN920_06490 PF03102 NeuB family LN920_06520 PF00535 Glycosyl transferase family 2 LN920_06525 PF02397 Bacterial sugar transferase LN920_06530 PF00483 Nucleotidyl transferase LN920_06535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LN920_06535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LN920_06535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LN920_06540 PF00342 Phosphoglucose isomerase LN920_06545 PF16363 GDP-mannose 4,6 dehydratase LN920_06550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN920_06550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN920_06550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN920_06550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN920_06555 PF02652 L-lactate permease LN920_06560 PF07729 FCD domain LN920_06560 PF00392 Bacterial regulatory proteins, gntR family LN920_06565 PF01070 FMN-dependent dehydrogenase LN920_06570 PF01565 FAD binding domain LN920_06570 PF09330 D-lactate dehydrogenase, membrane binding LN920_06575 PF00155 Aminotransferase class I and II LN920_06585 PF07729 FCD domain LN920_06585 PF00392 Bacterial regulatory proteins, gntR family LN920_06595 PF00285 Citrate synthase, C-terminal domain LN920_06600 PF00330 Aconitase family (aconitate hydratase) LN920_06600 PF00694 Aconitase C-terminal domain LN920_06635 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_06635 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_06645 PF08361 MAATS-type transcriptional repressor, C-terminal region LN920_06645 PF00440 Bacterial regulatory proteins, tetR family LN920_06660 PF00849 RNA pseudouridylate synthase LN920_06675 PF07715 TonB-dependent Receptor Plug Domain LN920_06675 PF00593 TonB dependent receptor LN920_06685 PF01037 Lrp/AsnC ligand binding domain LN920_06690 PF01266 FAD dependent oxidoreductase LN920_06695 PF01168 Alanine racemase, N-terminal domain LN920_06695 PF00842 Alanine racemase, C-terminal domain LN920_06700 PF01042 Endoribonuclease L-PSP LN920_06705 PF00324 Amino acid permease LN920_06710 PF00324 Amino acid permease LN920_06720 PF00171 Aldehyde dehydrogenase family LN920_06725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LN920_06725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LN920_06730 PF00501 AMP-binding enzyme LN920_06730 PF13193 AMP-binding enzyme C-terminal domain LN920_06735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_06735 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_06735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_06740 PF00378 Enoyl-CoA hydratase/isomerase LN920_06745 PF00378 Enoyl-CoA hydratase/isomerase LN920_06750 PF07690 Major Facilitator Superfamily LN920_06750 PF00083 Sugar (and other) transporter LN920_06755 PF00765 Autoinducer synthase LN920_06765 PF03472 Autoinducer binding domain LN920_06765 PF00196 Bacterial regulatory proteins, luxR family LN920_06770 PF00501 AMP-binding enzyme LN920_06775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_06775 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_06775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_06780 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_06780 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_06780 PF08242 Methyltransferase domain LN920_06780 PF16197 Ketoacyl-synthetase C-terminal extension LN920_06780 PF00550 Phosphopantetheine attachment site LN920_06780 PF00975 Thioesterase domain LN920_06780 PF14765 Polyketide synthase dehydratase LN920_06800 PF12697 Alpha/beta hydrolase family LN920_06805 PF01648 4'-phosphopantetheinyl transferase superfamily LN920_06810 PF13936 Helix-turn-helix domain LN920_06810 PF00665 Integrase core domain LN920_06815 PF12833 Helix-turn-helix domain LN920_06825 PF00905 Penicillin binding protein transpeptidase domain LN920_06885 PF13936 Helix-turn-helix domain LN920_06885 PF00665 Integrase core domain LN920_06900 PF01722 BolA-like protein LN920_06910 PF13614 AAA domain LN920_06925 PF09335 SNARE associated Golgi protein LN920_06930 PF07681 DoxX LN920_06935 PF04286 Protein of unknown function (DUF445) LN920_06940 PF00117 Glutamine amidotransferase class-I LN920_06940 PF00958 GMP synthase C terminal domain LN920_06940 PF02540 NAD synthase LN920_06945 PF13427 Domain of unknown function (DUF4111) LN920_06945 PF01909 Nucleotidyltransferase domain LN920_06950 PF03551 Transcriptional regulator PadR-like family LN920_06960 PF05726 Pirin C-terminal cupin domain LN920_06960 PF02678 Pirin LN920_06980 PF03485 Arginyl tRNA synthetase N terminal domain LN920_06980 PF05746 DALR anticodon binding domain LN920_06980 PF00750 tRNA synthetases class I (R) LN920_06985 PF00390 Malic enzyme, N-terminal domain LN920_06985 PF03949 Malic enzyme, NAD binding domain LN920_06995 PF04261 Dyp-type peroxidase family LN920_07000 PF01810 LysE type translocator LN920_07005 PF00950 ABC 3 transport family LN920_07010 PF00005 ABC transporter LN920_07030 PF00119 ATP synthase A chain LN920_07035 PF00137 ATP synthase subunit C LN920_07040 PF00430 ATP synthase B/B' CF(0) LN920_07045 PF00213 ATP synthase delta (OSCP) subunit LN920_07050 PF02874 ATP synthase alpha/beta family, beta-barrel domain LN920_07050 PF00306 ATP synthase alpha/beta chain, C terminal domain LN920_07050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN920_07055 PF00231 ATP synthase LN920_07060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN920_07060 PF02874 ATP synthase alpha/beta family, beta-barrel domain LN920_07065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LN920_07075 PF00255 Glutathione peroxidase LN920_07085 PF07690 Major Facilitator Superfamily LN920_07090 PF00440 Bacterial regulatory proteins, tetR family LN920_07095 PF00892 EamA-like transporter family LN920_07100 PF01300 Telomere recombination LN920_07105 PF02481 DNA recombination-mediator protein A LN920_07105 PF17782 DprA winged helix domain LN920_07115 PF01327 Polypeptide deformylase LN920_07175 PF00291 Pyridoxal-phosphate dependent enzyme LN920_07185 PF03358 NADPH-dependent FMN reductase LN920_07205 PF04055 Radical SAM superfamily LN920_07205 PF08497 Radical SAM N-terminal LN920_07205 PF11842 Domain of unknown function (DUF3362) LN920_07225 PF11798 IMS family HHH motif LN920_07225 PF11799 impB/mucB/samB family C-terminal domain LN920_07225 PF00817 impB/mucB/samB family LN920_07235 PF07690 Major Facilitator Superfamily LN920_07240 PF03641 Possible lysine decarboxylase LN920_07245 PF03741 Integral membrane protein TerC family LN920_07245 PF03471 Transporter associated domain LN920_07250 PF02810 SEC-C motif LN920_07255 PF03458 UPF0126 domain LN920_07260 PF07690 Major Facilitator Superfamily LN920_07265 PF03989 DNA gyrase C-terminal domain, beta-propeller LN920_07265 PF00521 DNA gyrase/topoisomerase IV, subunit A LN920_07270 PF00501 AMP-binding enzyme LN920_07270 PF13193 AMP-binding enzyme C-terminal domain LN920_07285 PF00719 Inorganic pyrophosphatase LN920_07290 PF03573 outer membrane porin, OprD family LN920_07305 PF00701 Dihydrodipicolinate synthetase family LN920_07315 PF00392 Bacterial regulatory proteins, gntR family LN920_07315 PF00155 Aminotransferase class I and II LN920_07330 PF00665 Integrase core domain LN920_07345 PF00809 Pterin binding enzyme LN920_07350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN920_07350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN920_07350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN920_07350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN920_07360 PF00665 Integrase core domain LN920_07390 PF00582 Universal stress protein family LN920_07395 PF01740 STAS domain LN920_07395 PF00916 Sulfate permease family LN920_07415 PF00543 Nitrogen regulatory protein P-II LN920_07420 PF00909 Ammonium Transporter Family LN920_07425 PF03477 ATP cone domain LN920_07430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LN920_07430 PF01872 RibD C-terminal domain LN920_07440 PF00677 Lumazine binding domain LN920_07460 PF02789 Cytosol aminopeptidase family, N-terminal domain LN920_07460 PF00883 Cytosol aminopeptidase family, catalytic domain LN920_07470 PF03739 Lipopolysaccharide export system permease LptF/LptG LN920_07475 PF01676 Metalloenzyme superfamily LN920_07475 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LN920_07480 PF03572 Peptidase family S41 LN920_07480 PF00595 PDZ domain LN920_07485 PF00158 Sigma-54 interaction domain LN920_07485 PF00072 Response regulator receiver domain LN920_07485 PF02954 Bacterial regulatory protein, Fis family LN920_07490 PF00512 His Kinase A (phospho-acceptor) domain LN920_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_07495 PF00196 Bacterial regulatory proteins, luxR family LN920_07495 PF00072 Response regulator receiver domain LN920_07500 PF00768 D-alanyl-D-alanine carboxypeptidase LN920_07505 PF00291 Pyridoxal-phosphate dependent enzyme LN920_07510 PF01842 ACT domain LN920_07510 PF00742 Homoserine dehydrogenase LN920_07510 PF03447 Homoserine dehydrogenase, NAD binding domain LN920_07515 PF10411 Disulfide bond isomerase protein N-terminus LN920_07515 PF13098 Thioredoxin-like domain LN920_07520 PF00589 Phage integrase family LN920_07520 PF02899 Phage integrase, N-terminal SAM-like domain LN920_07530 PF07670 Nucleoside recognition LN920_07530 PF07664 Ferrous iron transport protein B C terminus LN920_07530 PF02421 Ferrous iron transport protein B LN920_07540 PF02875 Mur ligase family, glutamate ligase domain LN920_07540 PF08245 Mur ligase middle domain LN920_07545 PF01098 Cell cycle protein LN920_07550 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN920_07555 PF01258 Prokaryotic dksA/traR C4-type zinc finger LN920_07560 PF00149 Calcineurin-like phosphoesterase LN920_07565 PF00293 NUDIX domain LN920_07570 PF01964 Radical SAM ThiC family LN920_07570 PF13667 ThiC-associated domain LN920_07585 PF00892 EamA-like transporter family LN920_07590 PF02321 Outer membrane efflux protein LN920_07595 PF01895 PhoU domain LN920_07600 PF04362 Bacterial Fe(2+) trafficking LN920_07605 PF00206 Lyase LN920_07605 PF14698 Argininosuccinate lyase C-terminal LN920_07610 PF06580 Histidine kinase LN920_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_07610 PF07694 5TMR of 5TMR-LYT LN920_07615 PF00072 Response regulator receiver domain LN920_07615 PF04397 LytTr DNA-binding domain LN920_07620 PF03900 Porphobilinogen deaminase, C-terminal domain LN920_07620 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LN920_07645 PF00816 H-NS histone family LN920_07660 PF00263 Bacterial type II and III secretion system protein LN920_07660 PF03958 Bacterial type II/III secretion system short domain LN920_07665 PF12401 Protein of unknown function (DUF2662) LN920_07665 PF00498 FHA domain LN920_07670 PF13419 Haloacid dehalogenase-like hydrolase LN920_07675 PF04715 Anthranilate synthase component I, N terminal region LN920_07675 PF00425 chorismate binding enzyme LN920_07700 PF03143 Elongation factor Tu C-terminal domain LN920_07700 PF03144 Elongation factor Tu domain 2 LN920_07700 PF00009 Elongation factor Tu GTP binding domain LN920_07710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LN920_07715 PF00467 KOW motif LN920_07715 PF02357 Transcription termination factor nusG LN920_07720 PF00298 Ribosomal protein L11, RNA binding domain LN920_07720 PF03946 Ribosomal protein L11, N-terminal domain LN920_07725 PF00687 Ribosomal protein L1p/L10e family LN920_07730 PF00466 Ribosomal protein L10 LN920_07735 PF16320 Ribosomal protein L7/L12 dimerisation domain LN920_07735 PF00542 Ribosomal protein L7/L12 C-terminal domain LN920_07740 PF04560 RNA polymerase Rpb2, domain 7 LN920_07740 PF00562 RNA polymerase Rpb2, domain 6 LN920_07740 PF10385 RNA polymerase beta subunit external 1 domain LN920_07740 PF04563 RNA polymerase beta subunit LN920_07740 PF04561 RNA polymerase Rpb2, domain 2 LN920_07740 PF04565 RNA polymerase Rpb2, domain 3 LN920_07745 PF04997 RNA polymerase Rpb1, domain 1 LN920_07745 PF04998 RNA polymerase Rpb1, domain 5 LN920_07745 PF05000 RNA polymerase Rpb1, domain 4 LN920_07745 PF04983 RNA polymerase Rpb1, domain 3 LN920_07745 PF00623 RNA polymerase Rpb1, domain 2 LN920_07775 PF00561 alpha/beta hydrolase fold LN920_07780 PF13726 Na+-H+ antiporter family LN920_07780 PF03553 Na+/H+ antiporter family LN920_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_07795 PF00183 Hsp90 protein LN920_07810 PF01323 DSBA-like thioredoxin domain LN920_07820 PF00376 MerR family regulatory protein LN920_07820 PF09278 MerR, DNA binding LN920_07840 PF00108 Thiolase, N-terminal domain LN920_07840 PF02803 Thiolase, C-terminal domain LN920_07845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LN920_07845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LN920_07845 PF00378 Enoyl-CoA hydratase/isomerase LN920_07865 PF08459 UvrC Helix-hairpin-helix N-terminal LN920_07865 PF02151 UvrB/uvrC motif LN920_07865 PF01541 GIY-YIG catalytic domain LN920_07875 PF01066 CDP-alcohol phosphatidyltransferase LN920_07880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LN920_07880 PF12833 Helix-turn-helix domain LN920_07880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LN920_07880 PF02805 Metal binding domain of Ada LN920_07905 PF13533 Biotin-lipoyl like LN920_07910 PF03652 Holliday junction resolvase LN920_07915 PF02622 Uncharacterized ACR, COG1678 LN920_07920 PF02463 RecF/RecN/SMC N terminal domain LN920_07930 PF06865 Pyrimidine/purine nucleoside phosphorylase LN920_07935 PF00588 SpoU rRNA Methylase family LN920_07935 PF08032 RNA 2'-O ribose methyltransferase substrate binding LN920_07945 PF01121 Dephospho-CoA kinase LN920_07950 PF01478 Type IV leader peptidase family LN920_07950 PF06750 Bacterial Peptidase A24 N-terminal domain LN920_07960 PF00482 Type II secretion system (T2SS), protein F LN920_07965 PF00437 Type II/IV secretion system protein LN920_07965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LN920_07970 PF00121 Triosephosphate isomerase LN920_07975 PF03840 Preprotein translocase SecG subunit LN920_07995 PF02576 RimP N-terminal domain LN920_07995 PF17384 RimP C-terminal SH3 domain LN920_08000 PF00575 S1 RNA binding domain LN920_08000 PF08529 NusA N-terminal domain LN920_08000 PF13184 NusA-like KH domain LN920_08005 PF00009 Elongation factor Tu GTP binding domain LN920_08005 PF08364 Bacterial translation initiation factor IF-2 associated region LN920_08005 PF04760 Translation initiation factor IF-2, N-terminal region LN920_08005 PF11987 Translation-initiation factor 2 LN920_08010 PF02033 Ribosome-binding factor A LN920_08015 PF03334 Na+/H+ antiporter subunit LN920_08020 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LN920_08025 PF01899 Na+/H+ ion antiporter subunit LN920_08030 PF00361 Proton-conducting membrane transporter LN920_08035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LN920_08040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LN920_08040 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LN920_08040 PF13244 Domain of unknown function (DUF4040) LN920_08040 PF00361 Proton-conducting membrane transporter LN920_08055 PF01502 Phosphoribosyl-AMP cyclohydrolase LN920_08060 PF01494 FAD binding domain LN920_08065 PF03109 ABC1 family LN920_08075 PF01209 ubiE/COQ5 methyltransferase family LN920_08085 PF03976 Polyphosphate kinase 2 (PPK2) LN920_08095 PF17946 RecC C-terminal domain LN920_08100 PF13361 UvrD-like helicase C-terminal domain LN920_08100 PF00580 UvrD/REP helicase N-terminal domain LN920_08100 PF12705 PD-(D/E)XK nuclease superfamily LN920_08105 PF13538 UvrD-like helicase C-terminal domain LN920_08110 PF00144 Beta-lactamase LN920_08115 PF00312 Ribosomal protein S15 LN920_08120 PF00575 S1 RNA binding domain LN920_08120 PF00013 KH domain LN920_08120 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LN920_08120 PF01138 3' exoribonuclease family, domain 1 LN920_08120 PF03725 3' exoribonuclease family, domain 2 LN920_08125 PF01544 CorA-like Mg2+ transporter protein LN920_08135 PF01556 DnaJ C terminal domain LN920_08135 PF00226 DnaJ domain LN920_08145 PF01430 Hsp33 protein LN920_08150 PF00999 Sodium/hydrogen exchanger family LN920_08150 PF02254 TrkA-N domain LN920_08155 PF17764 3′ DNA-binding domain (3′BD) LN920_08155 PF00271 Helicase conserved C-terminal domain LN920_08155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LN920_08155 PF18074 Primosomal protein N C-terminal domain LN920_08155 PF00270 DEAD/DEAH box helicase LN920_08160 PF00482 Type II secretion system (T2SS), protein F LN920_08165 PF08334 Type II secretion system (T2SS), protein G LN920_08165 PF07963 Prokaryotic N-terminal methylation motif LN920_08175 PF01588 Putative tRNA binding domain LN920_08180 PF00795 Carbon-nitrogen hydrolase LN920_08185 PF00571 CBS domain LN920_08185 PF03471 Transporter associated domain LN920_08190 PF01206 Sulfurtransferase TusA LN920_08205 PF01177 Asp/Glu/Hydantoin racemase LN920_08215 PF00762 Ferrochelatase LN920_08220 PF00753 Metallo-beta-lactamase superfamily LN920_08225 PF03884 DNA gyrase inhibitor YacG LN920_08245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LN920_08260 PF01197 Ribosomal protein L31 LN920_08265 PF03109 ABC1 family LN920_08270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_08270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LN920_08275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_08275 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_08275 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LN920_08280 PF01554 MatE LN920_08290 PF06969 HemN C-terminal domain LN920_08290 PF04055 Radical SAM superfamily LN920_08295 PF00106 short chain dehydrogenase LN920_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_08300 PF03466 LysR substrate binding domain LN920_08315 PF13193 AMP-binding enzyme C-terminal domain LN920_08315 PF00501 AMP-binding enzyme LN920_08320 PF12111 Polyribonucleotide phosphorylase C terminal LN920_08320 PF10150 Ribonuclease E/G family LN920_08320 PF00575 S1 RNA binding domain LN920_08325 PF01479 S4 domain LN920_08325 PF00849 RNA pseudouridylate synthase LN920_08330 PF13419 Haloacid dehalogenase-like hydrolase LN920_08335 PF13280 WYL domain LN920_08335 PF08279 HTH domain LN920_08340 PF02798 Glutathione S-transferase, N-terminal domain LN920_08350 PF03466 LysR substrate binding domain LN920_08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_08355 PF12706 Beta-lactamase superfamily domain LN920_08360 PF00141 Peroxidase LN920_08365 PF01590 GAF domain LN920_08365 PF05524 PEP-utilising enzyme, N-terminal LN920_08365 PF00391 PEP-utilising enzyme, mobile domain LN920_08365 PF02896 PEP-utilising enzyme, TIM barrel domain LN920_08370 PF00293 NUDIX domain LN920_08390 PF03466 LysR substrate binding domain LN920_08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_08400 PF00330 Aconitase family (aconitate hydratase) LN920_08405 PF00694 Aconitase C-terminal domain LN920_08415 PF00180 Isocitrate/isopropylmalate dehydrogenase LN920_08430 PF01176 Translation initiation factor 1A / IF-1 LN920_08440 PF01416 tRNA pseudouridine synthase LN920_08460 PF01118 Semialdehyde dehydrogenase, NAD binding domain LN920_08460 PF02774 Semialdehyde dehydrogenase, dimerisation domain LN920_08470 PF00375 Sodium:dicarboxylate symporter family LN920_08480 PF03279 Bacterial lipid A biosynthesis acyltransferase LN920_08485 PF01810 LysE type translocator LN920_08490 PF12848 ABC transporter LN920_08490 PF16326 ABC transporter C-terminal domain LN920_08490 PF00005 ABC transporter LN920_08495 PF04102 SlyX LN920_08500 PF00107 Zinc-binding dehydrogenase LN920_08500 PF08240 Alcohol dehydrogenase GroES-like domain LN920_08505 PF01638 HxlR-like helix-turn-helix LN920_08515 PF08272 Topoisomerase I zinc-ribbon-like LN920_08515 PF01131 DNA topoisomerase LN920_08515 PF01751 Toprim domain LN920_08515 PF01396 Topoisomerase DNA binding C4 zinc finger LN920_08530 PF00580 UvrD/REP helicase N-terminal domain LN920_08530 PF13361 UvrD-like helicase C-terminal domain LN920_08535 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LN920_08555 PF02254 TrkA-N domain LN920_08555 PF00999 Sodium/hydrogen exchanger family LN920_08560 PF00471 Ribosomal protein L33 LN920_08565 PF00830 Ribosomal L28 family LN920_08570 PF00171 Aldehyde dehydrogenase family LN920_08580 PF01842 ACT domain LN920_08580 PF00551 Formyl transferase LN920_08590 PF01618 MotA/TolQ/ExbB proton channel family LN920_08600 PF01625 Peptide methionine sulfoxide reductase LN920_08610 PF00186 Dihydrofolate reductase LN920_08615 PF00303 Thymidylate synthase LN920_08630 PF01790 Prolipoprotein diacylglyceryl transferase LN920_08650 PF00902 Sec-independent protein translocase protein (TatC) LN920_08655 PF02416 mttA/Hcf106 family LN920_08660 PF02416 mttA/Hcf106 family LN920_08670 PF01725 Ham1 family LN920_08680 PF00561 alpha/beta hydrolase fold LN920_08680 PF07021 Methionine biosynthesis protein MetW LN920_08685 PF00561 alpha/beta hydrolase fold LN920_08690 PF00682 HMGL-like LN920_08690 PF08502 LeuA allosteric (dimerisation) domain LN920_08695 PF18331 PKHD-type hydroxylase C-terminal domain LN920_08695 PF13640 2OG-Fe(II) oxygenase superfamily LN920_08700 PF00593 TonB dependent receptor LN920_08700 PF07715 TonB-dependent Receptor Plug Domain LN920_08705 PF05697 Bacterial trigger factor protein (TF) LN920_08705 PF05698 Bacterial trigger factor protein (TF) C-terminus LN920_08705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_08710 PF00574 Clp protease LN920_08715 PF06689 ClpX C4-type zinc finger LN920_08715 PF10431 C-terminal, D2-small domain, of ClpB protein LN920_08715 PF07724 AAA domain (Cdc48 subfamily) LN920_08730 PF05681 Fumarate hydratase (Fumerase) LN920_08730 PF05683 Fumarase C-terminus LN920_08735 PF07085 DRTGG domain LN920_08735 PF01515 Phosphate acetyl/butaryl transferase LN920_08740 PF00871 Acetokinase family LN920_08745 PF00920 Dehydratase family LN920_08750 PF01081 KDPG and KHG aldolase LN920_08755 PF02447 GntP family permease LN920_08760 PF01202 Shikimate kinase LN920_08765 PF00171 Aldehyde dehydrogenase family LN920_08770 PF00171 Aldehyde dehydrogenase family LN920_08775 PF00561 alpha/beta hydrolase fold LN920_08785 PF00933 Glycosyl hydrolase family 3 N terminal domain LN920_08790 PF03572 Peptidase family S41 LN920_08790 PF11818 C-terminal domain of tail specific protease (DUF3340) LN920_08790 PF00595 PDZ domain LN920_08790 PF17804 Tail specific protease N-terminal domain LN920_08795 PF00534 Glycosyl transferases group 1 LN920_08795 PF13439 Glycosyltransferase Family 4 LN920_08800 PF01569 PAP2 superfamily LN920_08805 PF04384 Iron-sulphur cluster assembly LN920_08810 PF00334 Nucleoside diphosphate kinase LN920_08815 PF04055 Radical SAM superfamily LN920_08825 PF13464 Domain of unknown function (DUF4115) LN920_08830 PF04551 GcpE protein LN920_08835 PF13393 Histidyl-tRNA synthetase LN920_08835 PF03129 Anticodon binding domain LN920_08845 PF13360 PQQ-like domain LN920_08850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LN920_08850 PF01926 50S ribosome-binding GTPase LN920_08865 PF00550 Phosphopantetheine attachment site LN920_08870 PF00550 Phosphopantetheine attachment site LN920_08880 PF13193 AMP-binding enzyme C-terminal domain LN920_08880 PF00501 AMP-binding enzyme LN920_08895 PF00221 Aromatic amino acid lyase LN920_08915 PF04820 Tryptophan halogenase LN920_08925 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_08925 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_08940 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_08940 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_08955 PF02556 Preprotein translocase subunit SecB LN920_08960 PF00462 Glutaredoxin LN920_08970 PF03193 RsgA GTPase LN920_08975 PF00929 Exonuclease LN920_08990 PF02321 Outer membrane efflux protein LN920_08995 PF00005 ABC transporter LN920_08995 PF02687 FtsX-like permease family LN920_08995 PF12704 MacB-like periplasmic core domain LN920_09000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_09015 PF09334 tRNA synthetases class I (M) LN920_09015 PF08264 Anticodon-binding domain of tRNA LN920_09015 PF00133 tRNA synthetases class I (I, L, M and V) LN920_09015 PF13603 Leucyl-tRNA synthetase, Domain 2 LN920_09025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN920_09025 PF00205 Thiamine pyrophosphate enzyme, central domain LN920_09025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LN920_09030 PF10369 Small subunit of acetolactate synthase LN920_09035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LN920_09035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LN920_09040 PF00563 EAL domain LN920_09040 PF00990 Diguanylate cyclase, GGDEF domain LN920_09040 PF03707 Bacterial signalling protein N terminal repeat LN920_09060 PF00009 Elongation factor Tu GTP binding domain LN920_09060 PF03144 Elongation factor Tu domain 2 LN920_09060 PF16658 Class II release factor RF3, C-terminal domain LN920_09075 PF01026 TatD related DNase LN920_09080 PF00330 Aconitase family (aconitate hydratase) LN920_09080 PF00694 Aconitase C-terminal domain LN920_09090 PF00899 ThiF family LN920_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09100 PF03466 LysR substrate binding domain LN920_09110 PF01207 Dihydrouridine synthase (Dus) LN920_09115 PF07690 Major Facilitator Superfamily LN920_09125 PF00892 EamA-like transporter family LN920_09130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LN920_09130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LN920_09135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LN920_09140 PF02233 NAD(P) transhydrogenase beta subunit LN920_09145 PF00106 short chain dehydrogenase LN920_09155 PF01261 Xylose isomerase-like TIM barrel LN920_09175 PF00378 Enoyl-CoA hydratase/isomerase LN920_09180 PF01627 Hpt domain LN920_09180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LN920_09180 PF00512 His Kinase A (phospho-acceptor) domain LN920_09180 PF00072 Response regulator receiver domain LN920_09180 PF00672 HAMP domain LN920_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_09185 PF00291 Pyridoxal-phosphate dependent enzyme LN920_09195 PF05958 tRNA (Uracil-5-)-methyltransferase LN920_09200 PF13291 ACT domain LN920_09200 PF04607 Region found in RelA / SpoT proteins LN920_09200 PF02824 TGS domain LN920_09210 PF03819 MazG nucleotide pyrophosphohydrolase domain LN920_09220 PF12627 Probable RNA and SrmB- binding site of polymerase A LN920_09220 PF01743 Poly A polymerase head domain LN920_09220 PF12626 Polymerase A arginine-rich C-terminus LN920_09225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LN920_09230 PF02548 Ketopantoate hydroxymethyltransferase LN920_09235 PF02569 Pantoate-beta-alanine ligase LN920_09240 PF03668 P-loop ATPase protein family LN920_09245 PF00381 PTS HPr component phosphorylation site LN920_09250 PF04751 Protein of unknown function (DUF615) LN920_09255 PF00501 AMP-binding enzyme LN920_09255 PF13193 AMP-binding enzyme C-terminal domain LN920_09260 PF02824 TGS domain LN920_09260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LN920_09260 PF03129 Anticodon binding domain LN920_09260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LN920_09265 PF00707 Translation initiation factor IF-3, C-terminal domain LN920_09265 PF05198 Translation initiation factor IF-3, N-terminal domain LN920_09270 PF00043 Glutathione S-transferase, C-terminal domain LN920_09270 PF02798 Glutathione S-transferase, N-terminal domain LN920_09275 PF09335 SNARE associated Golgi protein LN920_09280 PF07690 Major Facilitator Superfamily LN920_09290 PF01632 Ribosomal protein L35 LN920_09295 PF00453 Ribosomal protein L20 LN920_09320 PF03483 B3/4 domain LN920_09320 PF03484 tRNA synthetase B5 domain LN920_09320 PF03147 Ferredoxin-fold anticodon binding domain LN920_09320 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LN920_09320 PF01588 Putative tRNA binding domain LN920_09325 PF00216 Bacterial DNA-binding protein LN920_09340 PF07497 Rho termination factor, RNA-binding domain LN920_09340 PF07498 Rho termination factor, N-terminal domain LN920_09340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LN920_09345 PF00085 Thioredoxin LN920_09350 PF02541 Ppx/GppA phosphatase family LN920_09355 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LN920_09360 PF01171 PP-loop family LN920_09360 PF09179 TilS substrate binding domain LN920_09360 PF11734 TilS substrate C-terminal domain LN920_09365 PF03807 NADP oxidoreductase coenzyme F420-dependent LN920_09365 PF14748 Pyrroline-5-carboxylate reductase dimerisation LN920_09370 PF02325 YGGT family LN920_09375 PF01367 5'-3' exonuclease, C-terminal SAM fold LN920_09375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LN920_09375 PF01612 3'-5' exonuclease LN920_09375 PF00476 DNA polymerase family A LN920_09395 PF00437 Type II/IV secretion system protein LN920_09400 PF02566 OsmC-like protein LN920_09405 PF01047 MarR family LN920_09415 PF00795 Carbon-nitrogen hydrolase LN920_09460 PF04552 Sigma-54, DNA binding domain LN920_09460 PF04963 Sigma-54 factor, core binding domain LN920_09460 PF00309 Sigma-54 factor, Activator interacting domain (AID) LN920_09465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LN920_09470 PF01722 BolA-like protein LN920_09475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LN920_09480 PF01634 ATP phosphoribosyltransferase LN920_09485 PF00815 Histidinol dehydrogenase LN920_09490 PF00155 Aminotransferase class I and II LN920_09495 PF00425 chorismate binding enzyme LN920_09495 PF04715 Anthranilate synthase component I, N terminal region LN920_09535 PF00293 NUDIX domain LN920_09540 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_09545 PF00814 Glycoprotease family LN920_09550 PF04445 Putative SAM-dependent methyltransferase LN920_09560 PF00756 Putative esterase LN920_09570 PF00834 Ribulose-phosphate 3 epimerase family LN920_09585 PF00394 Multicopper oxidase LN920_09585 PF07731 Multicopper oxidase LN920_09585 PF07732 Multicopper oxidase LN920_09590 PF05275 Copper resistance protein B precursor (CopB) LN920_09600 PF00893 Small Multidrug Resistance protein LN920_09605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LN920_09605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LN920_09610 PF01960 ArgJ family LN920_09615 PF02445 Quinolinate synthetase A protein LN920_09640 PF00962 Adenosine/AMP deaminase LN920_09645 PF08240 Alcohol dehydrogenase GroES-like domain LN920_09645 PF00107 Zinc-binding dehydrogenase LN920_09650 PF03466 LysR substrate binding domain LN920_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_09655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_09655 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_09660 PF07690 Major Facilitator Superfamily LN920_09665 PF02515 CoA-transferase family III LN920_09675 PF14537 Cytochrome c3 LN920_09675 PF00890 FAD binding domain LN920_09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09680 PF03466 LysR substrate binding domain LN920_09690 PF07690 Major Facilitator Superfamily LN920_09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09695 PF03466 LysR substrate binding domain LN920_09705 PF01546 Peptidase family M20/M25/M40 LN920_09705 PF07687 Peptidase dimerisation domain LN920_09710 PF12833 Helix-turn-helix domain LN920_09710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LN920_09720 PF01810 LysE type translocator LN920_09725 PF03466 LysR substrate binding domain LN920_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09735 PF01717 Cobalamin-independent synthase, Catalytic domain LN920_09735 PF08267 Cobalamin-independent synthase, N-terminal domain LN920_09740 PF01613 Flavin reductase like domain LN920_09765 PF02567 Phenazine biosynthesis-like protein LN920_09860 PF13756 Stimulus-sensing domain LN920_09860 PF00672 HAMP domain LN920_09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_09860 PF00512 His Kinase A (phospho-acceptor) domain LN920_09860 PF13755 Sensor N-terminal transmembrane domain LN920_09870 PF00268 Ribonucleotide reductase, small chain LN920_09880 PF03477 ATP cone domain LN920_09880 PF02867 Ribonucleotide reductase, barrel domain LN920_09880 PF00317 Ribonucleotide reductase, all-alpha domain LN920_09890 PF00072 Response regulator receiver domain LN920_09890 PF00486 Transcriptional regulatory protein, C terminal LN920_09895 PF00512 His Kinase A (phospho-acceptor) domain LN920_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_09895 PF00672 HAMP domain LN920_09905 PF17151 Periplasmic sensor domain LN920_09905 PF00990 Diguanylate cyclase, GGDEF domain LN920_09910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LN920_09915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LN920_09920 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LN920_09920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LN920_09930 PF10531 SLBB domain LN920_09930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LN920_09930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LN920_09935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LN920_09935 PF00384 Molybdopterin oxidoreductase LN920_09935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN920_09940 PF00146 NADH dehydrogenase LN920_09945 PF12838 4Fe-4S dicluster domain LN920_09950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LN920_09955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LN920_09960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LN920_09960 PF00361 Proton-conducting membrane transporter LN920_09965 PF00361 Proton-conducting membrane transporter LN920_09970 PF00361 Proton-conducting membrane transporter LN920_09980 PF00313 'Cold-shock' DNA-binding domain LN920_09985 PF03466 LysR substrate binding domain LN920_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_09990 PF00175 Oxidoreductase NAD-binding domain LN920_09990 PF00970 Oxidoreductase FAD-binding domain LN920_10005 PF05552 Conserved TM helix LN920_10020 PF00291 Pyridoxal-phosphate dependent enzyme LN920_10025 PF13533 Biotin-lipoyl like LN920_10050 PF01588 Putative tRNA binding domain LN920_10050 PF09334 tRNA synthetases class I (M) LN920_10060 PF10609 NUBPL iron-transfer P-loop NTPase LN920_10065 PF01048 Phosphorylase superfamily LN920_10080 PF00692 dUTPase LN920_10110 PF01207 Dihydrouridine synthase (Dus) LN920_10120 PF02881 SRP54-type protein, helical bundle domain LN920_10120 PF02978 Signal peptide binding domain LN920_10120 PF00448 SRP54-type protein, GTPase domain LN920_10125 PF03309 Type III pantothenate kinase LN920_10135 PF01925 Sulfite exporter TauE/SafE LN920_10145 PF06470 SMC proteins Flexible Hinge Domain LN920_10145 PF02463 RecF/RecN/SMC N terminal domain LN920_10155 PF01653 NAD-dependent DNA ligase adenylation domain LN920_10155 PF00533 BRCA1 C Terminus (BRCT) domain LN920_10155 PF03120 NAD-dependent DNA ligase OB-fold domain LN920_10155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LN920_10155 PF12826 Helix-hairpin-helix motif LN920_10160 PF00210 Ferritin-like domain LN920_10165 PF07690 Major Facilitator Superfamily LN920_10170 PF00982 Glycosyltransferase family 20 LN920_10175 PF02358 Trehalose-phosphatase LN920_10180 PF12697 Alpha/beta hydrolase family LN920_10180 PF08241 Methyltransferase domain LN920_10185 PF04055 Radical SAM superfamily LN920_10185 PF00202 Aminotransferase class-III LN920_10185 PF06968 Biotin and Thiamin Synthesis associated domain LN920_10190 PF00155 Aminotransferase class I and II LN920_10205 PF00849 RNA pseudouridylate synthase LN920_10205 PF01479 S4 domain LN920_10210 PF04079 Segregation and condensation complex subunit ScpB LN920_10215 PF02616 Segregation and condensation protein ScpA LN920_10220 PF01300 Telomere recombination LN920_10225 PF04315 Elongation factor P hydroxylase LN920_10230 PF02620 Large ribosomal RNA subunit accumulation protein YceD LN920_10235 PF01783 Ribosomal L32p protein family LN920_10240 PF00698 Acyl transferase domain LN920_10250 PF00550 Phosphopantetheine attachment site LN920_10255 PF01476 LysM domain LN920_10255 PF04972 BON domain LN920_10260 PF08543 Phosphomethylpyrimidine kinase LN920_10260 PF02581 Thiamine monophosphate synthase LN920_10260 PF03070 TENA/THI-4/PQQC family LN920_10270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LN920_10285 PF02261 Aspartate decarboxylase LN920_10290 PF01195 Peptidyl-tRNA hydrolase LN920_10295 PF01386 Ribosomal L25p family LN920_10300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LN920_10300 PF14572 Phosphoribosyl synthetase-associated domain LN920_10325 PF08544 GHMP kinases C terminal LN920_10325 PF00288 GHMP kinases N terminal domain LN920_10330 PF03550 Outer membrane lipoprotein LolB LN920_10340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LN920_10340 PF01488 Shikimate / quinate 5-dehydrogenase LN920_10340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LN920_10345 PF10410 DnaB-helicase binding domain of primase LN920_10345 PF08275 DNA primase catalytic core, N-terminal domain LN920_10345 PF01807 CHC2 zinc finger LN920_10345 PF08278 DNA primase DnaG DnaB-binding LN920_10350 PF13525 Outer membrane lipoprotein LN920_10355 PF00849 RNA pseudouridylate synthase LN920_10355 PF01479 S4 domain LN920_10360 PF02578 Multi-copper polyphenol oxidoreductase laccase LN920_10365 PF03358 NADPH-dependent FMN reductase LN920_10370 PF01668 SmpB protein LN920_10375 PF01467 Cytidylyltransferase-like LN920_10380 PF00037 4Fe-4S binding domain LN920_10400 PF03466 LysR substrate binding domain LN920_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_10405 PF00180 Isocitrate/isopropylmalate dehydrogenase LN920_10410 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_10415 PF07859 alpha/beta hydrolase fold LN920_10420 PF00355 Rieske [2Fe-2S] domain LN920_10420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LN920_10425 PF00171 Aldehyde dehydrogenase family LN920_10430 PF00970 Oxidoreductase FAD-binding domain LN920_10430 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_10430 PF00175 Oxidoreductase NAD-binding domain LN920_10445 PF00795 Carbon-nitrogen hydrolase LN920_10445 PF02540 NAD synthase LN920_10455 PF05726 Pirin C-terminal cupin domain LN920_10455 PF02678 Pirin LN920_10460 PF03653 Uncharacterised protein family (UPF0093) LN920_10465 PF02801 Beta-ketoacyl synthase, C-terminal domain LN920_10465 PF00109 Beta-ketoacyl synthase, N-terminal domain LN920_10475 PF00164 Ribosomal protein S12/S23 LN920_10480 PF00177 Ribosomal protein S7p/S5e LN920_10485 PF00009 Elongation factor Tu GTP binding domain LN920_10485 PF03144 Elongation factor Tu domain 2 LN920_10485 PF14492 Elongation Factor G, domain II LN920_10485 PF03764 Elongation factor G, domain IV LN920_10485 PF00679 Elongation factor G C-terminus LN920_10490 PF00009 Elongation factor Tu GTP binding domain LN920_10490 PF03143 Elongation factor Tu C-terminal domain LN920_10490 PF03144 Elongation factor Tu domain 2 LN920_10505 PF00583 Acetyltransferase (GNAT) family LN920_10510 PF04377 Arginine-tRNA-protein transferase, C terminus LN920_10510 PF04376 Arginine-tRNA-protein transferase, N terminus LN920_10515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LN920_10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_10525 PF17854 FtsK alpha domain LN920_10525 PF09397 Ftsk gamma domain LN920_10525 PF01580 FtsK/SpoIIIE family LN920_10525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LN920_10530 PF01810 LysE type translocator LN920_10550 PF03776 Septum formation topological specificity factor MinE LN920_10555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LN920_10560 PF03775 Septum formation inhibitor MinC, C-terminal domain LN920_10570 PF01553 Acyltransferase LN920_10575 PF00691 OmpA family LN920_10575 PF13488 Glycine zipper LN920_10580 PF13361 UvrD-like helicase C-terminal domain LN920_10580 PF00580 UvrD/REP helicase N-terminal domain LN920_10585 PF00692 dUTPase LN920_10590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LN920_10590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LN920_10590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LN920_10590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LN920_10595 PF00696 Amino acid kinase family LN920_10605 PF13230 Glutamine amidotransferases class-II LN920_10610 PF01814 Hemerythrin HHE cation binding domain LN920_10620 PF03658 RnfH family Ubiquitin LN920_10625 PF04355 SmpA / OmlA family LN920_10630 PF01475 Ferric uptake regulator family LN920_10635 PF00437 Type II/IV secretion system protein LN920_10640 PF00437 Type II/IV secretion system protein LN920_10645 PF01168 Alanine racemase, N-terminal domain LN920_10655 PF00149 Calcineurin-like phosphoesterase LN920_10655 PF12320 Type 5 capsule protein repressor C-terminal domain LN920_10675 PF01370 NAD dependent epimerase/dehydratase family LN920_10675 PF08338 Domain of unknown function (DUF1731) LN920_10680 PF01266 FAD dependent oxidoreductase LN920_10685 PF00490 Delta-aminolevulinic acid dehydratase LN920_10690 PF03061 Thioesterase superfamily LN920_10695 PF13533 Biotin-lipoyl like LN920_10700 PF07690 Major Facilitator Superfamily LN920_10750 PF00083 Sugar (and other) transporter LN920_10755 PF00701 Dihydrodipicolinate synthetase family LN920_10780 PF13520 Amino acid permease LN920_10785 PF02574 Homocysteine S-methyltransferase LN920_10795 PF06039 Malate:quinone oxidoreductase (Mqo) LN920_10800 PF00732 GMC oxidoreductase LN920_10800 PF05199 GMC oxidoreductase LN920_10805 PF00171 Aldehyde dehydrogenase family LN920_10810 PF00440 Bacterial regulatory proteins, tetR family LN920_10810 PF13977 BetI-type transcriptional repressor, C-terminal LN920_10815 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_10820 PF02028 BCCT, betaine/carnitine/choline family transporter LN920_10830 PF03061 Thioesterase superfamily LN920_10840 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN920_10840 PF07683 Cobalamin synthesis protein cobW C-terminal domain LN920_10845 PF00375 Sodium:dicarboxylate symporter family LN920_10850 PF07152 YaeQ protein LN920_10855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LN920_10860 PF14883 Hypothetical glycosyl hydrolase family 13 LN920_10860 PF01522 Polysaccharide deacetylase LN920_10865 PF00535 Glycosyl transferase family 2 LN920_10875 PF00378 Enoyl-CoA hydratase/isomerase LN920_10890 PF09339 IclR helix-turn-helix domain LN920_10890 PF01614 Bacterial transcriptional regulator LN920_10895 PF00355 Rieske [2Fe-2S] domain LN920_10905 PF00355 Rieske [2Fe-2S] domain LN920_10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LN920_10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_10920 PF14759 Reductase C-terminal LN920_10925 PF07690 Major Facilitator Superfamily LN920_10935 PF12697 Alpha/beta hydrolase family LN920_10945 PF03447 Homoserine dehydrogenase, NAD binding domain LN920_10945 PF01958 Domain of unknown function DUF108 LN920_10950 PF00171 Aldehyde dehydrogenase family LN920_10955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LN920_10955 PF00205 Thiamine pyrophosphate enzyme, central domain LN920_10955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LN920_10965 PF07690 Major Facilitator Superfamily LN920_10970 PF01327 Polypeptide deformylase LN920_10975 PF04960 Glutaminase LN920_10980 PF12833 Helix-turn-helix domain LN920_10980 PF02311 AraC-like ligand binding domain LN920_10985 PF07690 Major Facilitator Superfamily LN920_10990 PF01263 Aldose 1-epimerase LN920_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_11000 PF03466 LysR substrate binding domain LN920_11010 PF07690 Major Facilitator Superfamily LN920_11015 PF00456 Transketolase, thiamine diphosphate binding domain LN920_11020 PF02780 Transketolase, C-terminal domain LN920_11020 PF02779 Transketolase, pyrimidine binding domain LN920_11025 PF02965 Vitamin B12 dependent methionine synthase, activation domain LN920_11025 PF00809 Pterin binding enzyme LN920_11025 PF02607 B12 binding domain LN920_11025 PF02310 B12 binding domain LN920_11025 PF02574 Homocysteine S-methyltransferase LN920_11030 PF01384 Phosphate transporter family LN920_11035 PF00291 Pyridoxal-phosphate dependent enzyme LN920_11050 PF03781 Sulfatase-modifying factor enzyme 1 LN920_11055 PF00884 Sulfatase LN920_11065 PF01521 Iron-sulphur cluster biosynthesis LN920_11065 PF01106 NifU-like domain LN920_11070 PF07715 TonB-dependent Receptor Plug Domain LN920_11070 PF00593 TonB dependent receptor LN920_11080 PF00561 alpha/beta hydrolase fold LN920_11085 PF00484 Carbonic anhydrase LN920_11090 PF13472 GDSL-like Lipase/Acylhydrolase family LN920_11095 PF00005 ABC transporter LN920_11105 PF01694 Rhomboid family LN920_11110 PF00912 Transglycosylase LN920_11115 PF02503 Polyphosphate kinase middle domain LN920_11115 PF13090 Polyphosphate kinase C-terminal domain 2 LN920_11115 PF17941 Polyphosphate kinase C-terminal domain 1 LN920_11115 PF13089 Polyphosphate kinase N-terminal domain LN920_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_11125 PF03466 LysR substrate binding domain LN920_11130 PF00561 alpha/beta hydrolase fold LN920_11135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_11135 PF18113 Rubredoxin binding C-terminal domain LN920_11140 PF00301 Rubredoxin LN920_11155 PF01336 OB-fold nucleic acid binding domain LN920_11155 PF00152 tRNA synthetases class II (D, K and N) LN920_11160 PF14052 Capsule assembly protein Wzi LN920_11170 PF01507 Phosphoadenosine phosphosulfate reductase family LN920_11175 PF00009 Elongation factor Tu GTP binding domain LN920_11190 PF03600 Citrate transporter LN920_11195 PF00571 CBS domain LN920_11195 PF03471 Transporter associated domain LN920_11195 PF01595 Cyclin M transmembrane N-terminal domain LN920_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_11200 PF03466 LysR substrate binding domain LN920_11205 PF00463 Isocitrate lyase family LN920_11220 PF01774 UreD urease accessory protein LN920_11225 PF00547 Urease, gamma subunit LN920_11230 PF00699 Urease beta subunit LN920_11240 PF05194 UreE urease accessory protein, C-terminal domain LN920_11240 PF02814 UreE urease accessory protein, N-terminal domain LN920_11245 PF01730 UreF LN920_11250 PF02492 CobW/HypB/UreG, nucleotide-binding domain LN920_11265 PF03717 Penicillin-binding Protein dimerisation domain LN920_11265 PF00905 Penicillin binding protein transpeptidase domain LN920_11280 PF05191 Adenylate kinase, active site lid LN920_11290 PF10576 Iron-sulfur binding domain of endonuclease III LN920_11290 PF00633 Helix-hairpin-helix motif LN920_11290 PF00730 HhH-GPD superfamily base excision DNA repair protein LN920_11295 PF04060 Putative Fe-S cluster LN920_11300 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LN920_11300 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LN920_11310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LN920_11315 PF02590 Predicted SPOUT methyltransferase LN920_11325 PF00004 ATPase family associated with various cellular activities (AAA) LN920_11325 PF05362 Lon protease (S16) C-terminal proteolytic domain LN920_11325 PF02190 ATP-dependent protease La (LON) substrate-binding domain LN920_11330 PF13018 Extended Signal Peptide of Type V secretion system LN920_11330 PF03895 YadA-like membrane anchor domain LN920_11330 PF05658 Head domain of trimeric autotransporter adhesin LN920_11330 PF05662 Coiled stalk of trimeric autotransporter adhesin LN920_11335 PF04355 SmpA / OmlA family LN920_11335 PF00691 OmpA family LN920_11340 PF01812 5-formyltetrahydrofolate cyclo-ligase family LN920_11515 PF13936 Helix-turn-helix domain LN920_11515 PF00665 Integrase core domain LN920_11680 PF01476 LysM domain LN920_11680 PF08525 Opacity-associated protein A N-terminal motif LN920_11680 PF01551 Peptidase family M23 LN920_11725 PF00884 Sulfatase LN920_11725 PF08019 Phosphoethanolamine transferase EptA/EptB LN920_11765 PF05195 Aminopeptidase P, N-terminal domain LN920_11765 PF00557 Metallopeptidase family M24 LN920_11770 PF01494 FAD binding domain LN920_11775 PF01494 FAD binding domain LN920_11785 PF13411 MerR HTH family regulatory protein LN920_11795 PF01810 LysE type translocator LN920_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_11800 PF03466 LysR substrate binding domain LN920_11810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LN920_11815 PF02021 Uncharacterised protein family UPF0102 LN920_11820 PF04972 BON domain LN920_11830 PF00293 NUDIX domain LN920_11830 PF09297 NADH pyrophosphatase zinc ribbon domain LN920_11840 PF00929 Exonuclease LN920_11845 PF01464 Transglycosylase SLT domain LN920_11845 PF01476 LysM domain LN920_11845 PF01464 Transglycosylase SLT domain LN920_11845 PF01476 LysM domain LN920_11850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LN920_11855 PF00528 Binding-protein-dependent transport system inner membrane component LN920_11860 PF00528 Binding-protein-dependent transport system inner membrane component LN920_11860 PF12911 N-terminal TM domain of oligopeptide transport permease C LN920_11865 PF00005 ABC transporter LN920_11865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LN920_11870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_11870 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_11875 PF00593 TonB dependent receptor LN920_11875 PF07715 TonB-dependent Receptor Plug Domain LN920_11885 PF00929 Exonuclease LN920_11890 PF01979 Amidohydrolase family LN920_11895 PF00563 EAL domain LN920_11895 PF01590 GAF domain LN920_11895 PF00990 Diguanylate cyclase, GGDEF domain LN920_11895 PF00360 Phytochrome region LN920_11900 PF00764 Arginosuccinate synthase LN920_11905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_11905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_11925 PF13610 DDE domain LN920_11935 PF02796 Helix-turn-helix domain of resolvase LN920_11935 PF00239 Resolvase, N terminal domain LN920_11940 PF13610 DDE domain LN920_11960 PF00809 Pterin binding enzyme LN920_11965 PF00893 Small Multidrug Resistance protein LN920_11985 PF00583 Acetyltransferase (GNAT) family LN920_11990 PF13495 Phage integrase, N-terminal SAM-like domain LN920_11990 PF00589 Phage integrase family LN920_11995 PF11809 Domain of unknown function (DUF3330) LN920_11995 PF00563 EAL domain LN920_12005 PF13610 DDE domain LN920_12020 PF13610 DDE domain LN920_12030 PF00106 short chain dehydrogenase LN920_12040 PF00440 Bacterial regulatory proteins, tetR family LN920_12040 PF17932 Tetracyclin repressor-like, C-terminal domain LN920_12045 PF17954 Quercetinase C-terminal cupin domain LN920_12045 PF02678 Pirin LN920_12055 PF00106 short chain dehydrogenase LN920_12060 PF00743 Flavin-binding monooxygenase-like LN920_12070 PF00860 Permease family LN920_12075 PF00962 Adenosine/AMP deaminase LN920_12080 PF01292 Prokaryotic cytochrome b561 LN920_12090 PF01351 Ribonuclease HII LN920_12095 PF02599 Global regulator protein family LN920_12100 PF00696 Amino acid kinase family LN920_12100 PF01842 ACT domain LN920_12100 PF13840 ACT domain LN920_12105 PF02272 DHHA1 domain LN920_12105 PF01411 tRNA synthetases class II (A) LN920_12105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LN920_12110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LN920_12110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LN920_12115 PF13393 Histidyl-tRNA synthetase LN920_12120 PF00709 Adenylosuccinate synthetase LN920_12135 PF00248 Aldo/keto reductase family LN920_12145 PF00027 Cyclic nucleotide-binding domain LN920_12145 PF13545 Crp-like helix-turn-helix domain LN920_12155 PF02566 OsmC-like protein LN920_12170 PF07724 AAA domain (Cdc48 subfamily) LN920_12170 PF02861 Clp amino terminal domain, pathogenicity island component LN920_12170 PF10431 C-terminal, D2-small domain, of ClpB protein LN920_12170 PF00004 ATPase family associated with various cellular activities (AAA) LN920_12170 PF17871 AAA lid domain LN920_12185 PF10672 S-adenosylmethionine-dependent methyltransferase LN920_12185 PF02926 THUMP domain LN920_12185 PF01170 Putative RNA methylase family UPF0020 LN920_12195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LN920_12195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LN920_12200 PF01979 Amidohydrolase family LN920_12205 PF00691 OmpA family LN920_12205 PF13488 Glycine zipper LN920_12215 PF13417 Glutathione S-transferase, N-terminal domain LN920_12215 PF00043 Glutathione S-transferase, C-terminal domain LN920_12220 PF02390 Putative methyltransferase LN920_12230 PF02798 Glutathione S-transferase, N-terminal domain LN920_12230 PF00043 Glutathione S-transferase, C-terminal domain LN920_12240 PF13192 Thioredoxin domain LN920_12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_12260 PF00578 AhpC/TSA family LN920_12260 PF10417 C-terminal domain of 1-Cys peroxiredoxin LN920_12265 PF04408 Helicase associated domain (HA2) LN920_12265 PF11898 Domain of unknown function (DUF3418) LN920_12265 PF00270 DEAD/DEAH box helicase LN920_12265 PF00271 Helicase conserved C-terminal domain LN920_12265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LN920_12270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LN920_12270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LN920_12280 PF07690 Major Facilitator Superfamily LN920_12285 PF03594 Benzoate membrane transport protein LN920_12290 PF00106 short chain dehydrogenase LN920_12295 PF00175 Oxidoreductase NAD-binding domain LN920_12295 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_12295 PF00970 Oxidoreductase FAD-binding domain LN920_12300 PF00866 Ring hydroxylating beta subunit LN920_12305 PF00355 Rieske [2Fe-2S] domain LN920_12305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LN920_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_12315 PF03466 LysR substrate binding domain LN920_12325 PF00403 Heavy-metal-associated domain LN920_12330 PF09278 MerR, DNA binding LN920_12330 PF00376 MerR family regulatory protein LN920_12365 PF02601 Exonuclease VII, large subunit LN920_12365 PF13742 OB-fold nucleic acid binding domain LN920_12395 PF01810 LysE type translocator LN920_12400 PF00313 'Cold-shock' DNA-binding domain LN920_12435 PF07690 Major Facilitator Superfamily LN920_12440 PF01638 HxlR-like helix-turn-helix LN920_12465 PF09190 DALR domain LN920_12465 PF01406 tRNA synthetases class I (C) catalytic domain LN920_12470 PF01380 SIS domain LN920_12470 PF00571 CBS domain LN920_12485 PF03968 OstA-like protein LN920_12490 PF12399 Branched-chain amino acid ATP-binding cassette transporter LN920_12490 PF00005 ABC transporter LN920_12495 PF02321 Outer membrane efflux protein LN920_12500 PF00664 ABC transporter transmembrane region LN920_12500 PF03412 Peptidase C39 family LN920_12500 PF00005 ABC transporter LN920_12510 PF01205 Uncharacterized protein family UPF0029 LN920_12515 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_12525 PF01596 O-methyltransferase LN920_12535 PF11953 Domain of unknown function (DUF3470) LN920_12535 PF00037 4Fe-4S binding domain LN920_12545 PF05190 MutS family domain IV LN920_12545 PF05192 MutS domain III LN920_12545 PF01624 MutS domain I LN920_12545 PF00488 MutS domain V LN920_12545 PF05188 MutS domain II LN920_12550 PF01037 Lrp/AsnC ligand binding domain LN920_12555 PF00892 EamA-like transporter family LN920_12560 PF03707 Bacterial signalling protein N terminal repeat LN920_12560 PF00990 Diguanylate cyclase, GGDEF domain LN920_12560 PF00563 EAL domain LN920_12565 PF03279 Bacterial lipid A biosynthesis acyltransferase LN920_12580 PF07690 Major Facilitator Superfamily LN920_12600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LN920_12600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LN920_12620 PF13419 Haloacid dehalogenase-like hydrolase LN920_12630 PF13296 Putative type VI secretion system Rhs element Vgr LN920_12630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LN920_12630 PF04717 Type VI secretion system, phage-baseplate injector LN920_12635 PF05593 RHS Repeat LN920_12635 PF03527 RHS protein LN920_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_12650 PF03466 LysR substrate binding domain LN920_12655 PF01566 Natural resistance-associated macrophage protein LN920_12660 PF03746 LamB/YcsF family LN920_12665 PF07286 Protein of unknown function (DUF1445) LN920_12675 PF02785 Biotin carboxylase C-terminal domain LN920_12675 PF00289 Biotin carboxylase, N-terminal domain LN920_12675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_12675 PF00364 Biotin-requiring enzyme LN920_12680 PF00654 Voltage gated chloride channel LN920_12700 PF00440 Bacterial regulatory proteins, tetR family LN920_12710 PF08240 Alcohol dehydrogenase GroES-like domain LN920_12710 PF13823 Alcohol dehydrogenase GroES-associated LN920_12710 PF00107 Zinc-binding dehydrogenase LN920_12725 PF02785 Biotin carboxylase C-terminal domain LN920_12725 PF00289 Biotin carboxylase, N-terminal domain LN920_12725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_12730 PF02525 Flavodoxin-like fold LN920_12750 PF08753 NikR C terminal nickel binding domain LN920_12750 PF01402 Ribbon-helix-helix protein, copG family LN920_12755 PF01425 Amidase LN920_12760 PF00497 Bacterial extracellular solute-binding proteins, family 3 LN920_12765 PF00005 ABC transporter LN920_12790 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LN920_12805 PF05947 Type VI secretion system, TssF LN920_12830 PF06744 Type VI secretion protein IcmF C-terminal LN920_12830 PF06761 Intracellular multiplication and human macrophage-killing LN920_12830 PF14331 ImcF-related N-terminal domain LN920_12840 PF00691 OmpA family LN920_12840 PF01389 OmpA-like transmembrane domain LN920_12855 PF10431 C-terminal, D2-small domain, of ClpB protein LN920_12855 PF17871 AAA lid domain LN920_12855 PF07724 AAA domain (Cdc48 subfamily) LN920_12855 PF00004 ATPase family associated with various cellular activities (AAA) LN920_12865 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LN920_12885 PF03466 LysR substrate binding domain LN920_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_12895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LN920_12900 PF07690 Major Facilitator Superfamily LN920_12915 PF02677 Epoxyqueuosine reductase QueH LN920_12930 PF00376 MerR family regulatory protein LN920_12930 PF09278 MerR, DNA binding LN920_12940 PF00701 Dihydrodipicolinate synthetase family LN920_12950 PF00392 Bacterial regulatory proteins, gntR family LN920_12955 PF05544 Proline racemase LN920_12960 PF01266 FAD dependent oxidoreductase LN920_12970 PF04324 BFD-like [2Fe-2S] binding domain LN920_12970 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_12980 PF00083 Sugar (and other) transporter LN920_12985 PF00171 Aldehyde dehydrogenase family LN920_12990 PF13520 Amino acid permease LN920_12995 PF03313 Serine dehydratase alpha chain LN920_12995 PF03315 Serine dehydratase beta chain LN920_13000 PF01575 MaoC like domain LN920_13000 PF00171 Aldehyde dehydrogenase family LN920_13005 PF05138 Phenylacetic acid catabolic protein LN920_13010 PF06243 Phenylacetic acid degradation B LN920_13015 PF05138 Phenylacetic acid catabolic protein LN920_13020 PF01883 Iron-sulfur cluster assembly protein LN920_13025 PF00970 Oxidoreductase FAD-binding domain LN920_13025 PF00175 Oxidoreductase NAD-binding domain LN920_13025 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_13030 PF00378 Enoyl-CoA hydratase/isomerase LN920_13035 PF00378 Enoyl-CoA hydratase/isomerase LN920_13040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LN920_13040 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LN920_13040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LN920_13045 PF00108 Thiolase, N-terminal domain LN920_13045 PF02803 Thiolase, C-terminal domain LN920_13050 PF14535 AMP-binding enzyme C-terminal domain LN920_13050 PF00501 AMP-binding enzyme LN920_13055 PF08223 PaaX-like protein C-terminal domain LN920_13055 PF07848 PaaX-like protein LN920_13060 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_13065 PF03061 Thioesterase superfamily LN920_13100 PF00199 Catalase LN920_13105 PF01292 Prokaryotic cytochrome b561 LN920_13125 PF12697 Alpha/beta hydrolase family LN920_13130 PF01613 Flavin reductase like domain LN920_13135 PF00296 Luciferase-like monooxygenase LN920_13140 PF00171 Aldehyde dehydrogenase family LN920_13150 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LN920_13160 PF00171 Aldehyde dehydrogenase family LN920_13165 PF02627 Carboxymuconolactone decarboxylase family LN920_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13170 PF03466 LysR substrate binding domain LN920_13175 PF02525 Flavodoxin-like fold LN920_13180 PF09339 IclR helix-turn-helix domain LN920_13180 PF01614 Bacterial transcriptional regulator LN920_13185 PF01494 FAD binding domain LN920_13190 PF00392 Bacterial regulatory proteins, gntR family LN920_13190 PF07702 UTRA domain LN920_13200 PF08402 TOBE domain LN920_13200 PF00005 ABC transporter LN920_13205 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13210 PF01266 FAD dependent oxidoreductase LN920_13215 PF00266 Aminotransferase class-V LN920_13220 PF13419 Haloacid dehalogenase-like hydrolase LN920_13225 PF07690 Major Facilitator Superfamily LN920_13230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_13230 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_13235 PF02515 CoA-transferase family III LN920_13240 PF09339 IclR helix-turn-helix domain LN920_13245 PF00378 Enoyl-CoA hydratase/isomerase LN920_13250 PF03060 Nitronate monooxygenase LN920_13255 PF07690 Major Facilitator Superfamily LN920_13260 PF09339 IclR helix-turn-helix domain LN920_13265 PF00108 Thiolase, N-terminal domain LN920_13265 PF02803 Thiolase, C-terminal domain LN920_13270 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LN920_13270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LN920_13270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LN920_13280 PF00378 Enoyl-CoA hydratase/isomerase LN920_13285 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_13285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_13285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13290 PF07690 Major Facilitator Superfamily LN920_13295 PF01144 Coenzyme A transferase LN920_13300 PF01144 Coenzyme A transferase LN920_13310 PF07690 Major Facilitator Superfamily LN920_13320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_13320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13320 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_13320 PF12806 Acetyl-CoA dehydrogenase C-terminal like LN920_13335 PF03466 LysR substrate binding domain LN920_13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13345 PF18140 Propionyl-coenzyme A carboxylase BT domain LN920_13345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_13345 PF00364 Biotin-requiring enzyme LN920_13345 PF02785 Biotin carboxylase C-terminal domain LN920_13345 PF00289 Biotin carboxylase, N-terminal domain LN920_13350 PF00378 Enoyl-CoA hydratase/isomerase LN920_13355 PF01039 Carboxyl transferase domain LN920_13360 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_13360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_13360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13365 PF00440 Bacterial regulatory proteins, tetR family LN920_13370 PF00501 AMP-binding enzyme LN920_13370 PF13193 AMP-binding enzyme C-terminal domain LN920_13390 PF03466 LysR substrate binding domain LN920_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13425 PF00994 Probable molybdopterin binding domain LN920_13425 PF18146 Damage-inducible protein CinA KH domain LN920_13425 PF02464 Competence-damaged protein LN920_13435 PF00199 Catalase LN920_13435 PF18011 C-terminal domain found in long catalases LN920_13435 PF06628 Catalase-related immune-responsive LN920_13460 PF00717 Peptidase S24-like LN920_13470 PF01037 Lrp/AsnC ligand binding domain LN920_13470 PF13404 AsnC-type helix-turn-helix domain LN920_13480 PF00512 His Kinase A (phospho-acceptor) domain LN920_13480 PF00072 Response regulator receiver domain LN920_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_13480 PF09308 LuxQ, periplasmic LN920_13485 PF00072 Response regulator receiver domain LN920_13500 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13505 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13510 PF00005 ABC transporter LN920_13515 PF00497 Bacterial extracellular solute-binding proteins, family 3 LN920_13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 LN920_13530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13530 PF03466 LysR substrate binding domain LN920_13535 PF01810 LysE type translocator LN920_13545 PF00266 Aminotransferase class-V LN920_13555 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_13560 PF00581 Rhodanese-like domain LN920_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13570 PF03466 LysR substrate binding domain LN920_13575 PF02798 Glutathione S-transferase, N-terminal domain LN920_13580 PF02798 Glutathione S-transferase, N-terminal domain LN920_13580 PF14834 Glutathione S-transferase, C-terminal domain LN920_13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13585 PF03466 LysR substrate binding domain LN920_13590 PF03788 LrgA family LN920_13595 PF04172 LrgB-like family LN920_13600 PF00155 Aminotransferase class I and II LN920_13600 PF00392 Bacterial regulatory proteins, gntR family LN920_13615 PF07690 Major Facilitator Superfamily LN920_13620 PF16957 Malonate decarboxylase, alpha subunit, transporter LN920_13625 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LN920_13630 PF06857 Malonate decarboxylase delta subunit (MdcD) LN920_13635 PF01039 Carboxyl transferase domain LN920_13645 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LN920_13650 PF00698 Acyl transferase domain LN920_13665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13665 PF03466 LysR substrate binding domain LN920_13670 PF00392 Bacterial regulatory proteins, gntR family LN920_13670 PF00155 Aminotransferase class I and II LN920_13680 PF02322 Cytochrome bd terminal oxidase subunit II LN920_13685 PF01654 Cytochrome bd terminal oxidase subunit I LN920_13695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LN920_13695 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_13695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13700 PF00296 Luciferase-like monooxygenase LN920_13705 PF00083 Sugar (and other) transporter LN920_13715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LN920_13720 PF00005 ABC transporter LN920_13725 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13730 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LN920_13735 PF01177 Asp/Glu/Hydantoin racemase LN920_13740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LN920_13750 PF03466 LysR substrate binding domain LN920_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13760 PF13382 Adenine deaminase C-terminal domain LN920_13760 PF01979 Amidohydrolase family LN920_13770 PF03960 ArsC family LN920_13775 PF01022 Bacterial regulatory protein, arsR family LN920_13780 PF01758 Sodium Bile acid symporter family LN920_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_13785 PF03466 LysR substrate binding domain LN920_13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_13800 PF13192 Thioredoxin domain LN920_13815 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_13820 PF00588 SpoU rRNA Methylase family LN920_13825 PF01336 OB-fold nucleic acid binding domain LN920_13825 PF02811 PHP domain LN920_13825 PF14579 Helix-hairpin-helix motif LN920_13825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LN920_13825 PF07733 Bacterial DNA polymerase III alpha NTPase domain LN920_13830 PF17763 Glutaminase/Asparaginase C-terminal domain LN920_13830 PF00710 Asparaginase, N-terminal LN920_13835 PF00375 Sodium:dicarboxylate symporter family LN920_13840 PF00155 Aminotransferase class I and II LN920_13845 PF01641 SelR domain LN920_13850 PF00255 Glutathione peroxidase LN920_13855 PF12833 Helix-turn-helix domain LN920_13855 PF12852 Cupin LN920_13865 PF00155 Aminotransferase class I and II LN920_13870 PF01909 Nucleotidyltransferase domain LN920_13870 PF08335 GlnD PII-uridylyltransferase LN920_13870 PF01966 HD domain LN920_13875 PF02222 ATP-grasp domain LN920_13885 PF05437 Branched-chain amino acid transport protein (AzlD) LN920_13890 PF03591 AzlC protein LN920_13915 PF01926 50S ribosome-binding GTPase LN920_13915 PF06071 Protein of unknown function (DUF933) LN920_13920 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13925 PF00005 ABC transporter LN920_13925 PF09383 NIL domain LN920_13930 PF03180 NLPA lipoprotein LN920_13935 PF03180 NLPA lipoprotein LN920_13940 PF00296 Luciferase-like monooxygenase LN920_13950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_13950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LN920_13965 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13970 PF00528 Binding-protein-dependent transport system inner membrane component LN920_13975 PF00005 ABC transporter LN920_13985 PF01037 Lrp/AsnC ligand binding domain LN920_13990 PF01709 Transcriptional regulator LN920_14000 PF00440 Bacterial regulatory proteins, tetR family LN920_14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_14020 PF03466 LysR substrate binding domain LN920_14030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LN920_14040 PF00892 EamA-like transporter family LN920_14060 PF13954 PapC N-terminal domain LN920_14060 PF13953 PapC C-terminal domain LN920_14060 PF00577 Outer membrane usher protein LN920_14065 PF02753 Pili assembly chaperone PapD, C-terminal domain LN920_14065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LN920_14070 PF16970 Type-1 fimbrial protein, A LN920_14085 PF06968 Biotin and Thiamin Synthesis associated domain LN920_14085 PF04055 Radical SAM superfamily LN920_14090 PF08331 Domain of unknown function (DUF1730) LN920_14095 PF03853 YjeF-related protein N-terminus LN920_14095 PF01256 Carbohydrate kinase LN920_14100 PF02075 Crossover junction endodeoxyribonuclease RuvC LN920_14115 PF00905 Penicillin binding protein transpeptidase domain LN920_14140 PF02772 S-adenosylmethionine synthetase, central domain LN920_14140 PF00438 S-adenosylmethionine synthetase, N-terminal domain LN920_14140 PF02773 S-adenosylmethionine synthetase, C-terminal domain LN920_14145 PF02779 Transketolase, pyrimidine binding domain LN920_14145 PF00456 Transketolase, thiamine diphosphate binding domain LN920_14145 PF02780 Transketolase, C-terminal domain LN920_14155 PF04264 YceI-like domain LN920_14185 PF05958 tRNA (Uracil-5-)-methyltransferase LN920_14190 PF04229 GrpB protein LN920_14195 PF00171 Aldehyde dehydrogenase family LN920_14195 PF01619 Proline dehydrogenase LN920_14195 PF14850 DNA-binding domain of Proline dehydrogenase LN920_14195 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LN920_14200 PF01037 Lrp/AsnC ligand binding domain LN920_14205 PF00474 Sodium:solute symporter family LN920_14210 PF02146 Sir2 family LN920_14215 PF01597 Glycine cleavage H-protein LN920_14220 PF12833 Helix-turn-helix domain LN920_14220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LN920_14230 PF00005 ABC transporter LN920_14230 PF00664 ABC transporter transmembrane region LN920_14235 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LN920_14240 PF06912 Protein of unknown function (DUF1275) LN920_14245 PF00375 Sodium:dicarboxylate symporter family LN920_14260 PF08007 Cupin superfamily protein LN920_14265 PF02545 Maf-like protein LN920_14275 PF00162 Phosphoglycerate kinase LN920_14285 PF01116 Fructose-bisphosphate aldolase class-II LN920_14295 PF04453 LPS transport system D LN920_14295 PF03968 OstA-like protein LN920_14300 PF01636 Phosphotransferase enzyme family LN920_14305 PF00483 Nucleotidyl transferase LN920_14310 PF02527 rRNA small subunit methyltransferase G LN920_14315 PF13614 AAA domain LN920_14320 PF02195 ParB-like nuclease domain LN920_14320 PF17762 HTH domain found in ParB protein LN920_14325 PF01618 MotA/TolQ/ExbB proton channel family LN920_14335 PF00005 ABC transporter LN920_14335 PF00664 ABC transporter transmembrane region LN920_14340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LN920_14345 PF02348 Cytidylyltransferase LN920_14350 PF09115 DNA polymerase III, delta subunit, C terminal LN920_14360 PF01026 TatD related DNase LN920_14375 PF07963 Prokaryotic N-terminal methylation motif LN920_14375 PF02501 Type II secretion system (T2SS), protein I LN920_14380 PF07963 Prokaryotic N-terminal methylation motif LN920_14380 PF11612 Type II secretion system (T2SS), protein J LN920_14385 PF03934 Type II secretion system (T2SS), protein K LN920_14395 PF03167 Uracil DNA glycosylase superfamily LN920_14415 PF02224 Cytidylate kinase LN920_14420 PF00575 S1 RNA binding domain LN920_14425 PF00216 Bacterial DNA-binding protein LN920_14435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LN920_14445 PF00743 Flavin-binding monooxygenase-like LN920_14455 PF03969 AFG1-like ATPase LN920_14460 PF01274 Malate synthase LN920_14470 PF02472 Biopolymer transport protein ExbD/TolR LN920_14475 PF02472 Biopolymer transport protein ExbD/TolR LN920_14480 PF01618 MotA/TolQ/ExbB proton channel family LN920_14490 PF07715 TonB-dependent Receptor Plug Domain LN920_14490 PF00593 TonB dependent receptor LN920_14510 PF01432 Peptidase family M3 LN920_14515 PF00528 Binding-protein-dependent transport system inner membrane component LN920_14520 PF00528 Binding-protein-dependent transport system inner membrane component LN920_14525 PF00005 ABC transporter LN920_14525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LN920_14545 PF00459 Inositol monophosphatase family LN920_14555 PF01649 Ribosomal protein S20 LN920_14560 PF13460 NAD(P)H-binding LN920_14565 PF03737 Aldolase/RraA LN920_14585 PF00270 DEAD/DEAH box helicase LN920_14585 PF00271 Helicase conserved C-terminal domain LN920_14585 PF03461 TRCF domain LN920_14585 PF17757 UvrB interaction domain LN920_14585 PF02559 CarD-like/TRCF domain LN920_14595 PF00211 Adenylate and Guanylate cyclase catalytic domain LN920_14600 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_14605 PF00012 Hsp70 protein LN920_14610 PF07743 HSCB C-terminal oligomerisation domain LN920_14610 PF00226 DnaJ domain LN920_14615 PF01521 Iron-sulphur cluster biosynthesis LN920_14620 PF01592 NifU-like N terminal domain LN920_14625 PF00266 Aminotransferase class-V LN920_14630 PF02082 Transcriptional regulator LN920_14645 PF00216 Bacterial DNA-binding protein LN920_14650 PF00639 PPIC-type PPIASE domain LN920_14650 PF09312 SurA N-terminal domain LN920_14655 PF12852 Cupin LN920_14655 PF12833 Helix-turn-helix domain LN920_14660 PF00487 Fatty acid desaturase LN920_14665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_14665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_14665 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_14670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_14670 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_14670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_14675 PF03109 ABC1 family LN920_14685 PF04073 Aminoacyl-tRNA editing domain LN920_14690 PF06276 Ferric iron reductase FhuF-like transporter LN920_14690 PF04183 IucA / IucC family LN920_14695 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LN920_14700 PF07690 Major Facilitator Superfamily LN920_14705 PF04183 IucA / IucC family LN920_14705 PF06276 Ferric iron reductase FhuF-like transporter LN920_14710 PF04183 IucA / IucC family LN920_14710 PF06276 Ferric iron reductase FhuF-like transporter LN920_14725 PF07715 TonB-dependent Receptor Plug Domain LN920_14725 PF00593 TonB dependent receptor LN920_14750 PF13419 Haloacid dehalogenase-like hydrolase LN920_14760 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LN920_14765 PF02277 Phosphoribosyltransferase LN920_14780 PF02654 Cobalamin-5-phosphate synthase LN920_14785 PF00793 DAHP synthetase I family LN920_14790 PF01925 Sulfite exporter TauE/SafE LN920_14810 PF00593 TonB dependent receptor LN920_14810 PF07715 TonB-dependent Receptor Plug Domain LN920_14815 PF02684 Lipid-A-disaccharide synthetase LN920_14825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_14830 PF00005 ABC transporter LN920_14865 PF01230 HIT domain LN920_14895 PF08241 Methyltransferase domain LN920_14900 PF00561 alpha/beta hydrolase fold LN920_14905 PF01053 Cys/Met metabolism PLP-dependent enzyme LN920_14915 PF02575 YbaB/EbfC DNA-binding family LN920_14920 PF13662 Toprim domain LN920_14920 PF02132 RecR protein LN920_14925 PF01612 3'-5' exonuclease LN920_14925 PF00570 HRDC domain LN920_14945 PF05166 YcgL domain LN920_14955 PF17862 AAA+ lid domain LN920_14955 PF00004 ATPase family associated with various cellular activities (AAA) LN920_14955 PF01434 Peptidase family M41 LN920_14965 PF00291 Pyridoxal-phosphate dependent enzyme LN920_14970 PF05175 Methyltransferase small domain LN920_14975 PF01264 Chorismate synthase LN920_14980 PF00990 Diguanylate cyclase, GGDEF domain LN920_14980 PF08448 PAS fold LN920_15000 PF04055 Radical SAM superfamily LN920_15005 PF00676 Dehydrogenase E1 component LN920_15010 PF02779 Transketolase, pyrimidine binding domain LN920_15010 PF02780 Transketolase, C-terminal domain LN920_15015 PF02817 e3 binding domain LN920_15015 PF00364 Biotin-requiring enzyme LN920_15015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LN920_15020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LN920_15020 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_15025 PF00106 short chain dehydrogenase LN920_15030 PF08240 Alcohol dehydrogenase GroES-like domain LN920_15030 PF00107 Zinc-binding dehydrogenase LN920_15035 PF01062 Bestrophin, RFP-TM, chloride channel LN920_15040 PF02954 Bacterial regulatory protein, Fis family LN920_15040 PF00158 Sigma-54 interaction domain LN920_15040 PF00072 Response regulator receiver domain LN920_15045 PF04273 Putative phosphatase (DUF442) LN920_15045 PF00753 Metallo-beta-lactamase superfamily LN920_15060 PF01925 Sulfite exporter TauE/SafE LN920_15075 PF06445 GyrI-like small molecule binding domain LN920_15075 PF12833 Helix-turn-helix domain LN920_15080 PF01638 HxlR-like helix-turn-helix LN920_15085 PF02525 Flavodoxin-like fold LN920_15095 PF07702 UTRA domain LN920_15095 PF00392 Bacterial regulatory proteins, gntR family LN920_15110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LN920_15115 PF00528 Binding-protein-dependent transport system inner membrane component LN920_15120 PF00005 ABC transporter LN920_15135 PF00083 Sugar (and other) transporter LN920_15140 PF07715 TonB-dependent Receptor Plug Domain LN920_15140 PF00593 TonB dependent receptor LN920_15145 PF00206 Lyase LN920_15145 PF10415 Fumarase C C-terminus LN920_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15160 PF03466 LysR substrate binding domain LN920_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15165 PF03466 LysR substrate binding domain LN920_15170 PF02803 Thiolase, C-terminal domain LN920_15170 PF00108 Thiolase, N-terminal domain LN920_15175 PF02667 Short chain fatty acid transporter LN920_15180 PF01144 Coenzyme A transferase LN920_15185 PF01144 Coenzyme A transferase LN920_15190 PF03466 LysR substrate binding domain LN920_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15215 PF12833 Helix-turn-helix domain LN920_15215 PF06719 AraC-type transcriptional regulator N-terminus LN920_15220 PF07690 Major Facilitator Superfamily LN920_15225 PF01738 Dienelactone hydrolase family LN920_15240 PF01613 Flavin reductase like domain LN920_15250 PF14525 AraC-binding-like domain LN920_15250 PF12833 Helix-turn-helix domain LN920_15255 PF00970 Oxidoreductase FAD-binding domain LN920_15255 PF00175 Oxidoreductase NAD-binding domain LN920_15255 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_15260 PF00866 Ring hydroxylating beta subunit LN920_15265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LN920_15265 PF00355 Rieske [2Fe-2S] domain LN920_15270 PF03459 TOBE domain LN920_15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15280 PF00528 Binding-protein-dependent transport system inner membrane component LN920_15285 PF00005 ABC transporter LN920_15285 PF03459 TOBE domain LN920_15290 PF00106 short chain dehydrogenase LN920_15295 PF00857 Isochorismatase family LN920_15295 PF00550 Phosphopantetheine attachment site LN920_15305 PF00149 Calcineurin-like phosphoesterase LN920_15310 PF13089 Polyphosphate kinase N-terminal domain LN920_15310 PF17941 Polyphosphate kinase C-terminal domain 1 LN920_15310 PF13090 Polyphosphate kinase C-terminal domain 2 LN920_15310 PF02503 Polyphosphate kinase middle domain LN920_15315 PF08042 PqqA family LN920_15320 PF12706 Beta-lactamase superfamily domain LN920_15325 PF03070 TENA/THI-4/PQQC family LN920_15330 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LN920_15335 PF13186 Iron-sulfur cluster-binding domain LN920_15335 PF04055 Radical SAM superfamily LN920_15340 PF01244 Membrane dipeptidase (Peptidase family M19) LN920_15355 PF13091 PLD-like domain LN920_15370 PF00199 Catalase LN920_15380 PF08240 Alcohol dehydrogenase GroES-like domain LN920_15380 PF00107 Zinc-binding dehydrogenase LN920_15390 PF00419 Fimbrial protein LN920_15395 PF00577 Outer membrane usher protein LN920_15395 PF13954 PapC N-terminal domain LN920_15395 PF13953 PapC C-terminal domain LN920_15400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LN920_15400 PF02753 Pili assembly chaperone PapD, C-terminal domain LN920_15410 PF16970 Type-1 fimbrial protein, A LN920_15430 PF01266 FAD dependent oxidoreductase LN920_15445 PF01593 Flavin containing amine oxidoreductase LN920_15450 PF00743 Flavin-binding monooxygenase-like LN920_15455 PF12146 Serine aminopeptidase, S33 LN920_15460 PF02321 Outer membrane efflux protein LN920_15465 PF00873 AcrB/AcrD/AcrF family LN920_15470 PF00529 HlyD membrane-fusion protein of T1SS LN920_15470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_15475 PF00072 Response regulator receiver domain LN920_15475 PF00486 Transcriptional regulatory protein, C terminal LN920_15480 PF00512 His Kinase A (phospho-acceptor) domain LN920_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_15480 PF00672 HAMP domain LN920_15480 PF16527 Two-component sensor protein CpxA, periplasmic domain LN920_15490 PF02311 AraC-like ligand binding domain LN920_15490 PF12833 Helix-turn-helix domain LN920_15495 PF12146 Serine aminopeptidase, S33 LN920_15545 PF13291 ACT domain LN920_15545 PF04607 Region found in RelA / SpoT proteins LN920_15545 PF02824 TGS domain LN920_15555 PF01975 Survival protein SurE LN920_15580 PF07690 Major Facilitator Superfamily LN920_15585 PF13533 Biotin-lipoyl like LN920_15590 PF01425 Amidase LN920_15595 PF00196 Bacterial regulatory proteins, luxR family LN920_15670 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LN920_15675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LN920_15675 PF14572 Phosphoribosyl synthetase-associated domain LN920_15705 PF00005 ABC transporter LN920_15710 PF01032 FecCD transport family LN920_15720 PF00107 Zinc-binding dehydrogenase LN920_15720 PF08240 Alcohol dehydrogenase GroES-like domain LN920_15735 PF06719 AraC-type transcriptional regulator N-terminus LN920_15735 PF12833 Helix-turn-helix domain LN920_15740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LN920_15740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LN920_15745 PF07690 Major Facilitator Superfamily LN920_15750 PF01370 NAD dependent epimerase/dehydratase family LN920_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15755 PF03466 LysR substrate binding domain LN920_15765 PF00920 Dehydratase family LN920_15770 PF00171 Aldehyde dehydrogenase family LN920_15785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LN920_15785 PF00529 HlyD membrane-fusion protein of T1SS LN920_15815 PF03737 Aldolase/RraA LN920_15820 PF01842 ACT domain LN920_15820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN920_15820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN920_15825 PF07690 Major Facilitator Superfamily LN920_15845 PF03466 LysR substrate binding domain LN920_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15855 PF08450 SMP-30/Gluconolactonase/LRE-like region LN920_15860 PF07702 UTRA domain LN920_15860 PF00392 Bacterial regulatory proteins, gntR family LN920_15870 PF04909 Amidohydrolase LN920_15875 PF07690 Major Facilitator Superfamily LN920_15890 PF05860 haemagglutination activity domain LN920_15890 PF04829 Pre-toxin domain with VENN motif LN920_15890 PF13332 Hemagglutinin repeat LN920_15890 PF13018 Extended Signal Peptide of Type V secretion system LN920_15895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LN920_15895 PF17287 POTRA domain LN920_15895 PF08479 POTRA domain, ShlB-type LN920_15905 PF07687 Peptidase dimerisation domain LN920_15905 PF01546 Peptidase family M20/M25/M40 LN920_15915 PF02254 TrkA-N domain LN920_15915 PF00999 Sodium/hydrogen exchanger family LN920_15920 PF07995 Glucose / Sorbosone dehydrogenase LN920_15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_15925 PF03466 LysR substrate binding domain LN920_15930 PF00857 Isochorismatase family LN920_15940 PF00440 Bacterial regulatory proteins, tetR family LN920_15940 PF08359 YsiA-like protein, C-terminal region LN920_15945 PF12706 Beta-lactamase superfamily domain LN920_15955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_15965 PF00376 MerR family regulatory protein LN920_15965 PF09278 MerR, DNA binding LN920_15970 PF01872 RibD C-terminal domain LN920_15975 PF00106 short chain dehydrogenase LN920_15980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_15985 PF01047 MarR family LN920_15990 PF07859 alpha/beta hydrolase fold LN920_16005 PF00199 Catalase LN920_16005 PF06628 Catalase-related immune-responsive LN920_16020 PF00171 Aldehyde dehydrogenase family LN920_16025 PF08240 Alcohol dehydrogenase GroES-like domain LN920_16025 PF00107 Zinc-binding dehydrogenase LN920_16030 PF00474 Sodium:solute symporter family LN920_16035 PF04341 Protein of unknown function, DUF485 LN920_16040 PF00501 AMP-binding enzyme LN920_16040 PF13193 AMP-binding enzyme C-terminal domain LN920_16045 PF06506 Propionate catabolism activator LN920_16045 PF00158 Sigma-54 interaction domain LN920_16045 PF02954 Bacterial regulatory protein, Fis family LN920_16055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_16055 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_16055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_16075 PF00171 Aldehyde dehydrogenase family LN920_16090 PF00920 Dehydratase family LN920_16095 PF07729 FCD domain LN920_16095 PF00392 Bacterial regulatory proteins, gntR family LN920_16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_16105 PF03466 LysR substrate binding domain LN920_16110 PF13378 Enolase C-terminal domain-like LN920_16110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LN920_16115 PF02426 Muconolactone delta-isomerase LN920_16120 PF04444 Catechol dioxygenase N terminus LN920_16120 PF00775 Dioxygenase LN920_16125 PF01144 Coenzyme A transferase LN920_16130 PF01144 Coenzyme A transferase LN920_16135 PF00108 Thiolase, N-terminal domain LN920_16135 PF02803 Thiolase, C-terminal domain LN920_16140 PF12146 Serine aminopeptidase, S33 LN920_16145 PF01804 Penicillin amidase LN920_16150 PF00171 Aldehyde dehydrogenase family LN920_16165 PF02311 AraC-like ligand binding domain LN920_16165 PF12833 Helix-turn-helix domain LN920_16170 PF01613 Flavin reductase like domain LN920_16175 PF00111 2Fe-2S iron-sulfur cluster binding domain LN920_16175 PF00175 Oxidoreductase NAD-binding domain LN920_16190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LN920_16190 PF00355 Rieske [2Fe-2S] domain LN920_16205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LN920_16210 PF01425 Amidase LN920_16220 PF07690 Major Facilitator Superfamily LN920_16230 PF00106 short chain dehydrogenase LN920_16245 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_16245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_16245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_16250 PF03466 LysR substrate binding domain LN920_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_16255 PF09339 IclR helix-turn-helix domain LN920_16255 PF01614 Bacterial transcriptional regulator LN920_16260 PF00753 Metallo-beta-lactamase superfamily LN920_16270 PF04143 Sulphur transport LN920_16280 PF01011 PQQ enzyme repeat LN920_16280 PF13360 PQQ-like domain LN920_16285 PF04966 Carbohydrate-selective porin, OprB family LN920_16290 PF05048 Periplasmic copper-binding protein (NosD) LN920_16295 PF01487 Type I 3-dehydroquinase LN920_16300 PF00775 Dioxygenase LN920_16305 PF00775 Dioxygenase LN920_16305 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LN920_16310 PF02627 Carboxymuconolactone decarboxylase family LN920_16315 PF07690 Major Facilitator Superfamily LN920_16320 PF00561 alpha/beta hydrolase fold LN920_16325 PF10397 Adenylosuccinate lyase C-terminus LN920_16325 PF00206 Lyase LN920_16330 PF02803 Thiolase, C-terminal domain LN920_16330 PF00108 Thiolase, N-terminal domain LN920_16335 PF01144 Coenzyme A transferase LN920_16340 PF01144 Coenzyme A transferase LN920_16345 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LN920_16350 PF04977 Septum formation initiator LN920_16355 PF04239 Protein of unknown function (DUF421) LN920_16360 PF03952 Enolase, N-terminal domain LN920_16360 PF00113 Enolase, C-terminal TIM barrel domain LN920_16365 PF00793 DAHP synthetase I family LN920_16370 PF00117 Glutamine amidotransferase class-I LN920_16370 PF06418 CTP synthase N-terminus LN920_16400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LN920_16400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_16415 PF00793 DAHP synthetase I family LN920_16420 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LN920_16425 PF00004 ATPase family associated with various cellular activities (AAA) LN920_16425 PF07724 AAA domain (Cdc48 subfamily) LN920_16425 PF17871 AAA lid domain LN920_16425 PF02861 Clp amino terminal domain, pathogenicity island component LN920_16425 PF10431 C-terminal, D2-small domain, of ClpB protein LN920_16430 PF02617 ATP-dependent Clp protease adaptor protein ClpS LN920_16440 PF01118 Semialdehyde dehydrogenase, NAD binding domain LN920_16440 PF02774 Semialdehyde dehydrogenase, dimerisation domain LN920_16455 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LN920_16460 PF00585 C-terminal regulatory domain of Threonine dehydratase LN920_16460 PF00291 Pyridoxal-phosphate dependent enzyme LN920_16465 PF02254 TrkA-N domain LN920_16465 PF02080 TrkA-C domain LN920_16470 PF02386 Cation transport protein LN920_16475 PF02253 Phospholipase A1 LN920_16480 PF05193 Peptidase M16 inactive domain LN920_16480 PF00675 Insulinase (Peptidase family M16) LN920_16480 PF08367 Peptidase M16C associated LN920_16485 PF00593 TonB dependent receptor LN920_16485 PF07715 TonB-dependent Receptor Plug Domain LN920_16490 PF00294 pfkB family carbohydrate kinase LN920_16500 PF07290 Protein of unknown function (DUF1449) LN920_16515 PF01654 Cytochrome bd terminal oxidase subunit I LN920_16520 PF02322 Cytochrome bd terminal oxidase subunit II LN920_16525 PF08173 Membrane bound YbgT-like protein LN920_16540 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LN920_16550 PF00448 SRP54-type protein, GTPase domain LN920_16550 PF02881 SRP54-type protein, helical bundle domain LN920_16575 PF00478 IMP dehydrogenase / GMP reductase domain LN920_16575 PF00571 CBS domain LN920_16580 PF00202 Aminotransferase class-III LN920_16585 PF00462 Glutaredoxin LN920_16595 PF03466 LysR substrate binding domain LN920_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_16600 PF00557 Metallopeptidase family M24 LN920_16605 PF05525 Branched-chain amino acid transport protein LN920_16630 PF05524 PEP-utilising enzyme, N-terminal LN920_16630 PF00391 PEP-utilising enzyme, mobile domain LN920_16630 PF02896 PEP-utilising enzyme, TIM barrel domain LN920_16630 PF00381 PTS HPr component phosphorylation site LN920_16630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LN920_16635 PF00294 pfkB family carbohydrate kinase LN920_16640 PF02378 Phosphotransferase system, EIIC LN920_16640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LN920_16660 PF00563 EAL domain LN920_16660 PF00990 Diguanylate cyclase, GGDEF domain LN920_16660 PF03707 Bacterial signalling protein N terminal repeat LN920_16670 PF07995 Glucose / Sorbosone dehydrogenase LN920_16675 PF02586 SOS response associated peptidase (SRAP) LN920_16680 PF00916 Sulfate permease family LN920_16680 PF01740 STAS domain LN920_16685 PF05922 Peptidase inhibitor I9 LN920_16685 PF00082 Subtilase family LN920_16700 PF00324 Amino acid permease LN920_16705 PF00266 Aminotransferase class-V LN920_16710 PF01037 Lrp/AsnC ligand binding domain LN920_16735 PF13419 Haloacid dehalogenase-like hydrolase LN920_16740 PF01479 S4 domain LN920_16745 PF00154 recA bacterial DNA recombination protein LN920_16750 PF02631 RecX family LN920_16765 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_16765 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LN920_16770 PF07977 FabA-like domain LN920_16775 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LN920_16775 PF00132 Bacterial transferase hexapeptide (six repeats) LN920_16785 PF01103 Surface antigen LN920_16785 PF07244 Surface antigen variable number repeat LN920_16790 PF13180 PDZ domain LN920_16790 PF17820 PDZ domain LN920_16790 PF02163 Peptidase family M50 LN920_16795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LN920_16795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LN920_16795 PF13288 DXP reductoisomerase C-terminal domain LN920_16805 PF01255 Putative undecaprenyl diphosphate synthase LN920_16810 PF01765 Ribosome recycling factor LN920_16815 PF00696 Amino acid kinase family LN920_16820 PF04055 Radical SAM superfamily LN920_16820 PF18693 TRAM domain LN920_16820 PF00919 Uncharacterized protein family UPF0004 LN920_16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_16825 PF00512 His Kinase A (phospho-acceptor) domain LN920_16825 PF00989 PAS fold LN920_16830 PF02954 Bacterial regulatory protein, Fis family LN920_16830 PF00072 Response regulator receiver domain LN920_16830 PF00158 Sigma-54 interaction domain LN920_16835 PF00440 Bacterial regulatory proteins, tetR family LN920_16840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LN920_16840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LN920_16850 PF02542 YgbB family LN920_16860 PF01266 FAD dependent oxidoreductase LN920_16885 PF16363 GDP-mannose 4,6 dehydratase LN920_16890 PF02635 DsrE/DsrF-like family LN920_16910 PF00892 EamA-like transporter family LN920_16915 PF00155 Aminotransferase class I and II LN920_16915 PF00392 Bacterial regulatory proteins, gntR family LN920_16920 PF01638 HxlR-like helix-turn-helix LN920_16925 PF00994 Probable molybdopterin binding domain LN920_16925 PF03454 MoeA C-terminal region (domain IV) LN920_16925 PF03453 MoeA N-terminal region (domain I and II) LN920_16930 PF01967 MoaC family LN920_16930 PF00994 Probable molybdopterin binding domain LN920_16935 PF02391 MoaE protein LN920_16945 PF06463 Molybdenum Cofactor Synthesis C LN920_16945 PF04055 Radical SAM superfamily LN920_16950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN920_16950 PF00384 Molybdopterin oxidoreductase LN920_16950 PF01568 Molydopterin dinucleotide binding domain LN920_16955 PF12804 MobA-like NTP transferase domain LN920_16960 PF04324 BFD-like [2Fe-2S] binding domain LN920_16960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LN920_16960 PF00384 Molybdopterin oxidoreductase LN920_16960 PF01568 Molydopterin dinucleotide binding domain LN920_16965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LN920_16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_16965 PF04324 BFD-like [2Fe-2S] binding domain LN920_16965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LN920_16965 PF18267 Rubredoxin NAD+ reductase C-terminal domain LN920_16970 PF04324 BFD-like [2Fe-2S] binding domain LN920_16970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LN920_16970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LN920_16970 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_16970 PF13806 Rieske-like [2Fe-2S] domain LN920_16970 PF18267 Rubredoxin NAD+ reductase C-terminal domain LN920_16980 PF00072 Response regulator receiver domain LN920_16980 PF00486 Transcriptional regulatory protein, C terminal LN920_16985 PF00005 ABC transporter LN920_16995 PF13438 Domain of unknown function (DUF4113) LN920_16995 PF00817 impB/mucB/samB family LN920_16995 PF11799 impB/mucB/samB family C-terminal domain LN920_17000 PF01220 Dehydroquinase class II LN920_17005 PF00364 Biotin-requiring enzyme LN920_17010 PF02785 Biotin carboxylase C-terminal domain LN920_17010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LN920_17010 PF00289 Biotin carboxylase, N-terminal domain LN920_17020 PF12832 MFS_1 like family LN920_17350 PF01645 Conserved region in glutamate synthase LN920_17365 PF01565 FAD binding domain LN920_17365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LN920_17370 PF01451 Low molecular weight phosphotyrosine protein phosphatase LN920_17380 PF00465 Iron-containing alcohol dehydrogenase LN920_17385 PF03061 Thioesterase superfamily LN920_17390 PF05506 Domain of unknown function (DUF756) LN920_17390 PF04185 Phosphoesterase family LN920_17395 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LN920_17395 PF12169 DNA polymerase III subunits gamma and tau domain III LN920_17395 PF12170 DNA polymerase III tau subunit V interacting with alpha LN920_17400 PF07690 Major Facilitator Superfamily LN920_17410 PF00144 Beta-lactamase LN920_17415 PF01575 MaoC like domain LN920_17425 PF02803 Thiolase, C-terminal domain LN920_17425 PF00108 Thiolase, N-terminal domain LN920_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_17435 PF03466 LysR substrate binding domain LN920_17440 PF00923 Transaldolase/Fructose-6-phosphate aldolase LN920_17445 PF01810 LysE type translocator LN920_17450 PF01037 Lrp/AsnC ligand binding domain LN920_17455 PF03594 Benzoate membrane transport protein LN920_17460 PF02308 MgtC family LN920_17465 PF00689 Cation transporting ATPase, C-terminus LN920_17465 PF00690 Cation transporter/ATPase, N-terminus LN920_17490 PF00582 Universal stress protein family LN920_17495 PF00005 ABC transporter LN920_17495 PF12848 ABC transporter LN920_17515 PF00593 TonB dependent receptor LN920_17515 PF07715 TonB-dependent Receptor Plug Domain LN920_17545 PF00924 Mechanosensitive ion channel LN920_17550 PF00593 TonB dependent receptor LN920_17550 PF07715 TonB-dependent Receptor Plug Domain LN920_17555 PF00440 Bacterial regulatory proteins, tetR family LN920_17570 PF01037 Lrp/AsnC ligand binding domain LN920_17575 PF01817 Chorismate mutase type II LN920_17585 PF00106 short chain dehydrogenase LN920_17595 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LN920_17595 PF11940 Domain of unknown function (DUF3458) Ig-like fold LN920_17595 PF01433 Peptidase family M1 domain LN920_17610 PF02110 Hydroxyethylthiazole kinase family LN920_17615 PF06445 GyrI-like small molecule binding domain LN920_17635 PF00465 Iron-containing alcohol dehydrogenase LN920_17650 PF00171 Aldehyde dehydrogenase family LN920_17655 PF13520 Amino acid permease LN920_17660 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LN920_17665 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LN920_17670 PF00117 Glutamine amidotransferase class-I LN920_17670 PF00958 GMP synthase C terminal domain LN920_17670 PF02540 NAD synthase LN920_17675 PF00749 tRNA synthetases class I (E and Q), catalytic domain LN920_17675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LN920_17680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LN920_17685 PF00149 Calcineurin-like phosphoesterase LN920_17695 PF00881 Nitroreductase family LN920_17705 PF17209 Hfq protein LN920_17715 PF01119 DNA mismatch repair protein, C-terminal domain LN920_17715 PF08676 MutL C terminal dimerisation domain LN920_17720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LN920_17725 PF00849 RNA pseudouridylate synthase LN920_17725 PF01479 S4 domain LN920_17740 PF00849 RNA pseudouridylate synthase LN920_17740 PF01479 S4 domain LN920_17750 PF04284 Protein of unknown function (DUF441) LN920_17755 PF03466 LysR substrate binding domain LN920_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_17770 PF07690 Major Facilitator Superfamily LN920_17775 PF00027 Cyclic nucleotide-binding domain LN920_17775 PF00520 Ion transport protein LN920_17785 PF06434 Aconitate hydratase 2 N-terminus LN920_17785 PF00330 Aconitase family (aconitate hydratase) LN920_17785 PF11791 Aconitate B N-terminal domain LN920_17800 PF07244 Surface antigen variable number repeat LN920_17800 PF01103 Surface antigen LN920_17800 PF17243 POTRA domain TamA domain 1 LN920_17805 PF07690 Major Facilitator Superfamily LN920_17810 PF03232 Ubiquinone biosynthesis protein COQ7 LN920_17820 PF00120 Glutamine synthetase, catalytic domain LN920_17825 PF00072 Response regulator receiver domain LN920_17825 PF00486 Transcriptional regulatory protein, C terminal LN920_17830 PF13493 Domain of unknown function (DUF4118) LN920_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_17830 PF00512 His Kinase A (phospho-acceptor) domain LN920_17830 PF02702 Osmosensitive K+ channel His kinase sensor domain LN920_17835 PF02669 K+-transporting ATPase, c chain LN920_17845 PF03814 Potassium-transporting ATPase A subunit LN920_17860 PF03109 ABC1 family LN920_17865 PF00899 ThiF family LN920_17870 PF01613 Flavin reductase like domain LN920_17875 PF13193 AMP-binding enzyme C-terminal domain LN920_17875 PF00501 AMP-binding enzyme LN920_17880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_17880 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_17880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_17885 PF00106 short chain dehydrogenase LN920_17890 PF12833 Helix-turn-helix domain LN920_17895 PF09084 NMT1/THI5 like LN920_17900 PF00528 Binding-protein-dependent transport system inner membrane component LN920_17905 PF13847 Methyltransferase domain LN920_17905 PF17827 PrmC N-terminal domain LN920_17910 PF00472 RF-1 domain LN920_17910 PF03462 PCRF domain LN920_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_17920 PF03466 LysR substrate binding domain LN920_17935 PF00296 Luciferase-like monooxygenase LN920_17945 PF13994 PgaD-like protein LN920_17950 PF00535 Glycosyl transferase family 2 LN920_17955 PF01522 Polysaccharide deacetylase LN920_17955 PF14883 Hypothetical glycosyl hydrolase family 13 LN920_17965 PF03618 Kinase/pyrophosphorylase LN920_17970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LN920_17970 PF02896 PEP-utilising enzyme, TIM barrel domain LN920_17970 PF00391 PEP-utilising enzyme, mobile domain LN920_17980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LN920_17980 PF06481 COX Aromatic Rich Motif LN920_17985 PF00115 Cytochrome C and Quinol oxidase polypeptide I LN920_17990 PF00510 Cytochrome c oxidase subunit III LN920_17995 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LN920_18000 PF01040 UbiA prenyltransferase family LN920_18005 PF01250 Ribosomal protein S6 LN920_18010 PF01084 Ribosomal protein S18 LN920_18015 PF01281 Ribosomal protein L9, N-terminal domain LN920_18015 PF03948 Ribosomal protein L9, C-terminal domain LN920_18020 PF00772 DnaB-like helicase N terminal domain LN920_18020 PF03796 DnaB-like helicase C terminal domain LN920_18025 PF00842 Alanine racemase, C-terminal domain LN920_18025 PF01168 Alanine racemase, N-terminal domain LN920_18035 PF01841 Transglutaminase-like superfamily LN920_18035 PF08379 Bacterial transglutaminase-like N-terminal region LN920_18045 PF14403 Circularly permuted ATP-grasp type 2 LN920_18055 PF01134 Glucose inhibited division protein A LN920_18055 PF13932 GidA associated domain LN920_18075 PF02954 Bacterial regulatory protein, Fis family LN920_18080 PF02142 MGS-like domain LN920_18080 PF01808 AICARFT/IMPCHase bienzyme LN920_18085 PF02844 Phosphoribosylglycinamide synthetase, N domain LN920_18085 PF02843 Phosphoribosylglycinamide synthetase, C domain LN920_18085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LN920_18090 PF03180 NLPA lipoprotein LN920_18095 PF09383 NIL domain LN920_18095 PF00005 ABC transporter LN920_18100 PF00528 Binding-protein-dependent transport system inner membrane component LN920_18105 PF16123 Hydroxyacylglutathione hydrolase C-terminus LN920_18105 PF00753 Metallo-beta-lactamase superfamily LN920_18120 PF00375 Sodium:dicarboxylate symporter family LN920_18140 PF07995 Glucose / Sorbosone dehydrogenase LN920_18145 PF00892 EamA-like transporter family LN920_18150 PF01177 Asp/Glu/Hydantoin racemase LN920_18160 PF02470 MlaD protein LN920_18165 PF04403 Paraquat-inducible protein A LN920_18175 PF02080 TrkA-C domain LN920_18175 PF06826 Predicted Permease Membrane Region LN920_18180 PF00155 Aminotransferase class I and II LN920_18205 PF00083 Sugar (and other) transporter LN920_18205 PF08946 Osmosensory transporter coiled coil LN920_18255 PF00392 Bacterial regulatory proteins, gntR family LN920_18255 PF07729 FCD domain LN920_18265 PF03616 Sodium/glutamate symporter LN920_18270 PF00561 alpha/beta hydrolase fold LN920_18305 PF04076 Bacterial OB fold (BOF) protein LN920_18335 PF00324 Amino acid permease LN920_18340 PF00171 Aldehyde dehydrogenase family LN920_18345 PF00202 Aminotransferase class-III LN920_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_18350 PF03466 LysR substrate binding domain LN920_18375 PF00069 Protein kinase domain LN920_18395 PF00814 Glycoprotease family LN920_18400 PF01165 Ribosomal protein S21 LN920_18405 PF09424 Yqey-like protein LN920_18410 PF01435 Peptidase family M48 LN920_18415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LN920_18415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LN920_18430 PF00156 Phosphoribosyl transferase domain LN920_18435 PF02674 Colicin V production protein LN920_18440 PF01180 Dihydroorotate dehydrogenase LN920_18460 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LN920_18460 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LN920_18465 PF00881 Nitroreductase family LN920_18475 PF00271 Helicase conserved C-terminal domain LN920_18475 PF00270 DEAD/DEAH box helicase LN920_18480 PF00313 'Cold-shock' DNA-binding domain LN920_18495 PF04542 Sigma-70 region 2 LN920_18495 PF04545 Sigma-70, region 4 LN920_18495 PF00140 Sigma-70 factor, region 1.2 LN920_18500 PF04241 Protein of unknown function (DUF423) LN920_18510 PF05690 Thiazole biosynthesis protein ThiG LN920_18520 PF03883 Peroxide stress protein YaaA LN920_18530 PF12706 Beta-lactamase superfamily domain LN920_18535 PF01546 Peptidase family M20/M25/M40 LN920_18535 PF07687 Peptidase dimerisation domain LN920_18545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LN920_18550 PF00800 Prephenate dehydratase LN920_18550 PF01817 Chorismate mutase type II LN920_18550 PF01842 ACT domain LN920_18555 PF00756 Putative esterase LN920_18560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_18560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_18560 PF02770 Acyl-CoA dehydrogenase, middle domain LN920_18565 PF00375 Sodium:dicarboxylate symporter family LN920_18570 PF02885 Glycosyl transferase family, helical bundle domain LN920_18570 PF00591 Glycosyl transferase family, a/b domain LN920_18575 PF07023 Protein of unknown function (DUF1315) LN920_18580 PF01513 ATP-NAD kinase LN920_18585 PF00912 Transglycosylase LN920_18585 PF00905 Penicillin binding protein transpeptidase domain LN920_18585 PF14814 Bifunctional transglycosylase second domain LN920_18595 PF00293 NUDIX domain LN920_18605 PF00512 His Kinase A (phospho-acceptor) domain LN920_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LN920_18605 PF08521 Two-component sensor kinase N-terminal LN920_18610 PF00486 Transcriptional regulatory protein, C terminal LN920_18610 PF00072 Response regulator receiver domain LN920_18620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LN920_18620 PF00437 Type II/IV secretion system protein LN920_18630 PF18389 TrmO C-terminal domain LN920_18630 PF01980 tRNA-methyltransferase O LN920_18635 PF00970 Oxidoreductase FAD-binding domain LN920_18635 PF00175 Oxidoreductase NAD-binding domain LN920_18640 PF02567 Phenazine biosynthesis-like protein LN920_18650 PF16325 Peptidase family U32 C-terminal domain LN920_18650 PF01136 Peptidase family U32 LN920_18655 PF00037 4Fe-4S binding domain LN920_18660 PF00893 Small Multidrug Resistance protein LN920_18665 PF00005 ABC transporter LN920_18670 PF00528 Binding-protein-dependent transport system inner membrane component LN920_18675 PF00528 Binding-protein-dependent transport system inner membrane component LN920_18680 PF00497 Bacterial extracellular solute-binding proteins, family 3 LN920_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LN920_18685 PF03466 LysR substrate binding domain LN920_18690 PF13533 Biotin-lipoyl like LN920_18695 PF00873 AcrB/AcrD/AcrF family LN920_18700 PF02321 Outer membrane efflux protein LN920_18705 PF00464 Serine hydroxymethyltransferase LN920_18735 PF00005 ABC transporter LN920_18740 PF01061 ABC-2 type transporter LN920_18745 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LN920_18745 PF14489 QueF-like protein LN920_18755 PF01098 Cell cycle protein LN920_18760 PF13406 Transglycosylase SLT domain LN920_18765 PF03330 Lytic transglycolase LN920_18765 PF05036 Sporulation related domain LN920_18785 PF12833 Helix-turn-helix domain LN920_18795 PF00889 Elongation factor TS LN920_18800 PF00318 Ribosomal protein S2 LN920_18805 PF00557 Metallopeptidase family M24 LN920_18815 PF07690 Major Facilitator Superfamily LN920_18825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LN920_18825 PF07992 Pyridine nucleotide-disulphide oxidoreductase LN920_18830 PF04055 Radical SAM superfamily LN920_18835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LN920_18835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LN920_18835 PF09317 Domain of unknown function (DUF1974) LN920_18850 PF05221 S-adenosyl-L-homocysteine hydrolase LN920_18850 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LN920_18855 PF02219 Methylenetetrahydrofolate reductase LN920_18860 PF04452 RNA methyltransferase LN920_18865 PF00563 EAL domain LN920_18865 PF00990 Diguanylate cyclase, GGDEF domain LN920_18865 PF03707 Bacterial signalling protein N terminal repeat LN920_18870 PF03949 Malic enzyme, NAD binding domain LN920_18870 PF01515 Phosphate acetyl/butaryl transferase LN920_18870 PF00390 Malic enzyme, N-terminal domain LN920_18875 PF01743 Poly A polymerase head domain LN920_18875 PF12627 Probable RNA and SrmB- binding site of polymerase A LN920_18880 PF13180 PDZ domain LN920_18885 PF01784 NIF3 (NGG1p interacting factor 3) LN920_18890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LN920_18890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LN920_18925 PF01040 UbiA prenyltransferase family LN920_18930 PF04345 Chorismate lyase LN920_18935 PF00120 Glutamine synthetase, catalytic domain LN920_18935 PF03951 Glutamine synthetase, beta-Grasp domain LN920_18940 PF00854 POT family LN920_18950 PF13356 Arm DNA-binding domain LN920_18950 PF00589 Phage integrase family