ACICU_00002 SM00387 Histidine kinase-like ATPases ACICU_00002 SM00433 TopoisomeraseII ACICU_00004 SM00480 DNA polymerase III beta subunit ACICU_00005 SM00382 ATPases associated with a variety of cellular activities ACICU_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ACICU_00008 SM01234 ACICU_00008 ACICU_00021 SM00014 Acid phosphatase homologues ACICU_00025 SM01001 AIR carboxylase ACICU_00029 SM00235 Zinc-dependent metalloprotease ACICU_00034 SM00849 Metallo-beta-lactamase superfamily ACICU_00038 SM00248 ankyrin repeats ACICU_00043 SM00904 Riboflavin kinase ACICU_00047 SM00382 ATPases associated with a variety of cellular activities ACICU_00050 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_00051 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_00067 SM00644 ACICU_00067 ACICU_00072 SM00226 Low molecular weight phosphatase family ACICU_00074 SM00984 UDP binding domain ACICU_00080 SM00858 ACICU_00080 ACICU_00089 SM00984 UDP binding domain ACICU_00094 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_00094 SM00895 ACICU_00094 ACICU_00098 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_00098 SM00895 ACICU_00098 ACICU_00109 SM00825 Beta-ketoacyl synthase ACICU_00110 SM00671 Sel1-like repeats. ACICU_00122 SM00344 helix_turn_helix ASNC type ACICU_00124 SM01005 Alanine racemase, C-terminal domain ACICU_00138 SM00421 helix_turn_helix, Lux Regulon ACICU_00141 SM00823 Phosphopantetheine attachment site ACICU_00141 SM01294 ACICU_00141 ACICU_00142 SM00823 Phosphopantetheine attachment site ACICU_00142 SM00824 Thioesterase ACICU_00163 SM00836 DALR anticodon binding domain ACICU_00163 SM01016 Arginyl tRNA synthetase N terminal dom ACICU_00164 SM00919 Malic enzyme, NAD binding domain ACICU_00164 SM01274 ACICU_00164 ACICU_00168 SM00382 ATPases associated with a variety of cellular activities ACICU_00178 SM00382 ATPases associated with a variety of cellular activities ACICU_00183 SM00342 helix_turn_helix, arabinose operon control protein ACICU_00201 SM00422 helix_turn_helix, mercury resistance ACICU_00203 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_00207 SM00641 Glycosyl hydrolases family 25 ACICU_00210 SM01091 Transporter associated domain ACICU_00214 SM00434 DNA Topoisomerase IV ACICU_00231 SM00857 Resolvase, N terminal domain ACICU_00234 SM00422 helix_turn_helix, mercury resistance ACICU_00243 SM00938 Nitrogen regulatory protein P-II ACICU_00256 SM00245 tail specific protease ACICU_00257 SM00382 ATPases associated with a variety of cellular activities ACICU_00257 SM00448 cheY-homologous receiver domain ACICU_00258 SM00387 Histidine kinase-like ATPases ACICU_00258 SM00388 His Kinase A (phosphoacceptor) domain ACICU_00259 SM00421 helix_turn_helix, Lux Regulon ACICU_00259 SM00448 cheY-homologous receiver domain ACICU_00265 SM00899 ACICU_00265 ACICU_00283 SM00448 cheY-homologous receiver domain ACICU_00283 SM00850 LytTr DNA-binding domain ACICU_00289 SM00528 Domain in histone-like proteins of HNS family ACICU_00291 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACICU_00293 SM00240 Forkhead associated domain ACICU_00298 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACICU_00298 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACICU_00299 SM00649 Ribosomal protein L11/L12 ACICU_00304 SM00663 RNA polymerase I subunit A N-terminus ACICU_00312 SM00387 Histidine kinase-like ATPases ACICU_00317 SM00422 helix_turn_helix, mercury resistance ACICU_00326 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACICU_00326 SM00465 GIY-YIG type nucleases (URI domain) ACICU_00329 SM00342 helix_turn_helix, arabinose operon control protein ACICU_00331 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_00335 SM00732 Likely ribonuclease with RNase H fold. ACICU_00340 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACICU_00349 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_00370 SM00382 ATPases associated with a variety of cellular activities ACICU_00372 SM01387 ACICU_00372 ACICU_00373 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_00373 SM00322 K homology RNA-binding domain ACICU_00376 SM00271 DnaJ molecular chaperone homology domain ACICU_00380 SM00487 DEAD-like helicases superfamily ACICU_00380 SM00490 helicase superfamily c-terminal domain ACICU_00386 SM00116 Domain in cystathionine beta-synthase and other proteins. ACICU_00386 SM01091 Transporter associated domain ACICU_00393 SM00849 Metallo-beta-lactamase superfamily ACICU_00406 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_00410 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_00411 SM00363 S4 RNA-binding domain ACICU_00419 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACICU_00428 SM01329 ACICU_00428 ACICU_00431 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_00432 SM00342 helix_turn_helix, arabinose operon control protein ACICU_00434 SM00870 ACICU_00434 ACICU_00437 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACICU_00443 SM00382 ATPases associated with a variety of cellular activities ACICU_00445 SM00829 Enoylreductase ACICU_00448 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACICU_00448 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACICU_00448 SM00493 ACICU_00448 ACICU_00452 SM00360 RNA recognition motif ACICU_00480 SM00671 Sel1-like repeats. ACICU_00483 SM00917 LeuA allosteric (dimerisation) domain ACICU_00484 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ACICU_00488 SM00382 ATPases associated with a variety of cellular activities ACICU_00488 SM00994 ClpX C4-type zinc finger ACICU_00488 SM01086 C-terminal, D2-small domain, of ClpB protein ACICU_00503 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACICU_00503 SM00245 tail specific protease ACICU_00505 SM00014 Acid phosphatase homologues ACICU_00507 SM00562 ACICU_00507 ACICU_00509 SM00028 Tetratricopeptide repeats ACICU_00515 SM00564 beta-propeller repeat ACICU_00518 SM00563 Phosphate acyltransferases ACICU_00531 SM00825 Beta-ketoacyl synthase ACICU_00533 SM00822 ACICU_00533 ACICU_00534 SM00825 Beta-ketoacyl synthase ACICU_00539 SM00450 Rhodanese Homology Domain ACICU_00541 SM00479 ACICU_00541 ACICU_00545 SM00382 ATPases associated with a variety of cellular activities ACICU_00554 SM00052 Putative diguanylate phosphodiesterase ACICU_00554 SM00267 diguanylate cyclase ACICU_00557 SM01236 ACICU_00557 ACICU_00571 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACICU_00571 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACICU_00579 SM00073 Histidine Phosphotransfer domain ACICU_00579 SM00387 Histidine kinase-like ATPases ACICU_00579 SM00388 His Kinase A (phosphoacceptor) domain ACICU_00579 SM00448 cheY-homologous receiver domain ACICU_00583 SM00954 Region found in RelA / SpoT proteins ACICU_00586 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACICU_00595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACICU_00606 SM00873 B3/4 domain ACICU_00606 SM00874 tRNA synthetase B5 domain ACICU_00606 SM00896 Ferredoxin-fold anticodon binding domain ACICU_00607 SM00411 bacterial (prokaryotic) histone like domain ACICU_00609 SM00357 Cold shock protein domain ACICU_00609 SM00382 ATPases associated with a variety of cellular activities ACICU_00609 SM00959 Rho termination factor, N-terminal domain ACICU_00613 SM00977 TilS substrate C-terminal domain ACICU_00616 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACICU_00616 SM00474 3'-5' exonuclease ACICU_00616 SM00475 5'-3' exonuclease ACICU_00616 SM00482 DNA polymerase A domain ACICU_00620 SM00382 ATPases associated with a variety of cellular activities ACICU_00622 SM00347 helix_turn_helix multiple antibiotic resistance protein ACICU_00625 SM00331 Sigma factor PP2C-like phosphatases ACICU_00673 SM00342 helix_turn_helix, arabinose operon control protein ACICU_00679 SM00903 Flavin reductase like domain ACICU_00688 SM00564 beta-propeller repeat ACICU_00700 SM00387 Histidine kinase-like ATPases ACICU_00705 SM00448 cheY-homologous receiver domain ACICU_00705 SM00862 Transcriptional regulatory protein, C terminal ACICU_00706 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACICU_00706 SM00387 Histidine kinase-like ATPases ACICU_00706 SM00388 His Kinase A (phosphoacceptor) domain ACICU_00708 SM00267 diguanylate cyclase ACICU_00713 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACICU_00714 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACICU_00714 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACICU_00723 SM00357 Cold shock protein domain ACICU_00751 SM00382 ATPases associated with a variety of cellular activities ACICU_00751 SM00962 SRP54-type protein, GTPase domain ACICU_00751 SM00963 SRP54-type protein, helical bundle domain ACICU_00755 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_00757 SM00771 ZipA, C-terminal domain (FtsZ-binding) ACICU_00758 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACICU_00758 SM00292 breast cancer carboxy-terminal domain ACICU_00758 SM00532 Ligase N family ACICU_00768 SM00363 S4 RNA-binding domain ACICU_00775 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACICU_00776 SM00822 ACICU_00776 ACICU_00778 SM00257 Lysin motif ACICU_00787 SM01400 ACICU_00787 ACICU_00790 SM00028 Tetratricopeptide repeats ACICU_00792 SM00400 zinc finger ACICU_00792 SM00493 ACICU_00792 ACICU_00794 SM00363 S4 RNA-binding domain ACICU_00802 SM01329 ACICU_00802 ACICU_00813 SM00825 Beta-ketoacyl synthase ACICU_00817 SM00838 Elongation factor G C-terminus ACICU_00817 SM00889 Elongation factor G, domain IV ACICU_00825 SM00843 ACICU_00825 ACICU_00834 SM00563 Phosphate acyltransferases ACICU_00848 SM00382 ATPases associated with a variety of cellular activities ACICU_00857 SM01004 Delta-aminolevulinic acid dehydratase ACICU_00862 SM00382 ATPases associated with a variety of cellular activities ACICU_00871 SM01130 ACICU_00871 ACICU_00875 SM00965 Secretin and TonB N terminus short domain ACICU_00898 SM01322 ACICU_00898 ACICU_00906 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_00910 SM00822 ACICU_00910 ACICU_00924 SM00342 helix_turn_helix, arabinose operon control protein ACICU_00929 SM00822 ACICU_00929 ACICU_00932 SM00861 Transketolase, pyrimidine binding domain ACICU_00933 SM01018 B12 binding domain ACICU_00945 SM00947 Carbonic anhydrase ACICU_00947 SM00382 ATPases associated with a variety of cellular activities ACICU_00966 SM01091 Transporter associated domain ACICU_00976 SM00988 UreE urease accessory protein, N-terminal domain ACICU_00986 SM00478 endonuclease III ACICU_00988 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACICU_00992 SM00382 ATPases associated with a variety of cellular activities ACICU_00992 SM00464 Found in ATP-dependent protease La (LON) ACICU_01012 SM00530 Helix-turn-helix XRE-family like proteins ACICU_01058 SM01040 BRO family, N-terminal domain ACICU_01079 SM01011 Aminopeptidase P, N-terminal domain ACICU_01083 SM00422 helix_turn_helix, mercury resistance ACICU_01094 SM00479 ACICU_01094 ACICU_01095 SM00257 Lysin motif ACICU_01099 SM00382 ATPases associated with a variety of cellular activities ACICU_01102 SM00479 ACICU_01102 ACICU_01104 SM00267 diguanylate cyclase ACICU_01119 SM00671 Sel1-like repeats. ACICU_01120 SM00671 Sel1-like repeats. ACICU_01121 SM00671 Sel1-like repeats. ACICU_01131 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01131 SM00895 ACICU_01131 ACICU_01134 SM00344 helix_turn_helix ASNC type ACICU_01154 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACICU_01155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACICU_01157 SM00788 Adenylosuccinate synthetase ACICU_01161 SM00100 Cyclic nucleotide-monophosphate binding domain ACICU_01161 SM00419 helix_turn_helix, cAMP Regulatory protein ACICU_01165 SM00382 ATPases associated with a variety of cellular activities ACICU_01165 SM01086 C-terminal, D2-small domain, of ClpB protein ACICU_01168 SM00981 ACICU_01168 ACICU_01184 SM00382 ATPases associated with a variety of cellular activities ACICU_01184 SM00487 DEAD-like helicases superfamily ACICU_01184 SM00490 helicase superfamily c-terminal domain ACICU_01184 SM00847 Helicase associated domain (HA2) Add an annotation ACICU_01196 SM00422 helix_turn_helix, mercury resistance ACICU_01205 SM00530 Helix-turn-helix XRE-family like proteins ACICU_01210 SM00357 Cold shock protein domain ACICU_01224 SM00840 ACICU_01224 ACICU_01225 SM00116 Domain in cystathionine beta-synthase and other proteins. ACICU_01229 SM00382 ATPases associated with a variety of cellular activities ACICU_01231 SM00382 ATPases associated with a variety of cellular activities ACICU_01240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACICU_01240 SM00534 ATPase domain of DNA mismatch repair MUTS family ACICU_01246 SM00344 helix_turn_helix ASNC type ACICU_01248 SM00052 Putative diguanylate phosphodiesterase ACICU_01254 SM00422 helix_turn_helix, mercury resistance ACICU_01269 SM00796 Allophanate hydrolase subunit 1 ACICU_01270 SM00797 Allophanate hydrolase subunit 2 ACICU_01271 SM00878 Biotin carboxylase C-terminal domain ACICU_01273 SM00671 Sel1-like repeats. ACICU_01280 SM00829 Enoylreductase ACICU_01283 SM00796 Allophanate hydrolase subunit 1 ACICU_01283 SM00797 Allophanate hydrolase subunit 2 ACICU_01283 SM00878 Biotin carboxylase C-terminal domain ACICU_01291 SM00382 ATPases associated with a variety of cellular activities ACICU_01307 SM00382 ATPases associated with a variety of cellular activities ACICU_01307 SM01086 C-terminal, D2-small domain, of ClpB protein ACICU_01314 SM00248 ankyrin repeats ACICU_01321 SM00422 helix_turn_helix, mercury resistance ACICU_01323 SM01130 ACICU_01323 ACICU_01325 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01325 SM00895 ACICU_01325 ACICU_01330 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01356 SM01060 ACICU_01356 ACICU_01359 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01359 SM00895 ACICU_01359 ACICU_01362 SM00903 Flavin reductase like domain ACICU_01373 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_01375 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01375 SM00866 ACICU_01375 ACICU_01377 SM00382 ATPases associated with a variety of cellular activities ACICU_01385 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_01390 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_01397 SM00882 Coenzyme A transferase ACICU_01398 SM00882 Coenzyme A transferase ACICU_01408 SM00878 Biotin carboxylase C-terminal domain ACICU_01425 SM01236 ACICU_01425 ACICU_01426 SM01060 ACICU_01426 ACICU_01429 SM00384 DNA binding domain with preference for A/T rich regions ACICU_01433 SM00344 helix_turn_helix ASNC type ACICU_01435 SM00387 Histidine kinase-like ATPases ACICU_01435 SM00388 His Kinase A (phosphoacceptor) domain ACICU_01435 SM00448 cheY-homologous receiver domain ACICU_01436 SM00421 helix_turn_helix, Lux Regulon ACICU_01436 SM00448 cheY-homologous receiver domain ACICU_01440 SM00382 ATPases associated with a variety of cellular activities ACICU_01441 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_01442 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_01448 SM00450 Rhodanese Homology Domain ACICU_01449 SM00822 ACICU_01449 ACICU_01456 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01466 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACICU_01470 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01481 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_01482 SM00382 ATPases associated with a variety of cellular activities ACICU_01487 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01487 SM00895 ACICU_01487 ACICU_01493 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACICU_01503 SM00481 DNA polymerase alpha chain like domain ACICU_01504 SM00870 ACICU_01504 ACICU_01509 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01512 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACICU_01519 SM00100 Cyclic nucleotide-monophosphate binding domain ACICU_01519 SM00419 helix_turn_helix, cAMP Regulatory protein ACICU_01523 SM00382 ATPases associated with a variety of cellular activities ACICU_01523 SM00930 ACICU_01523 ACICU_01530 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_01533 SM00382 ATPases associated with a variety of cellular activities ACICU_01535 SM00344 helix_turn_helix ASNC type ACICU_01537 SM00563 Phosphate acyltransferases ACICU_01539 SM01236 ACICU_01539 ACICU_01554 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_01554 SM00876 Biotin and Thiamin Synthesis associated domain ACICU_01558 SM00530 Helix-turn-helix XRE-family like proteins ACICU_01566 SM00861 Transketolase, pyrimidine binding domain ACICU_01568 SM00867 YceI-like domain ACICU_01575 SM00344 helix_turn_helix ASNC type ACICU_01579 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01581 SM00382 ATPases associated with a variety of cellular activities ACICU_01585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACICU_01587 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACICU_01599 SM00470 ParB-like nuclease domain ACICU_01602 SM00382 ATPases associated with a variety of cellular activities ACICU_01614 SM00986 Uracil DNA glycosylase superfamily ACICU_01614 SM00987 UreE urease accessory protein, C-terminal domain ACICU_01619 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_01620 SM00411 bacterial (prokaryotic) histone like domain ACICU_01622 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACICU_01625 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01639 SM00382 ATPases associated with a variety of cellular activities ACICU_01650 SM00487 DEAD-like helicases superfamily ACICU_01650 SM00490 helicase superfamily c-terminal domain ACICU_01650 SM00982 ACICU_01650 ACICU_01650 SM01058 CarD-like/TRCF domain ACICU_01652 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ACICU_01656 SM00271 DnaJ molecular chaperone homology domain ACICU_01663 SM00411 bacterial (prokaryotic) histone like domain ACICU_01665 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01683 SM01006 Siderophore biosynthesis protein domain ACICU_01688 SM00855 Phosphoglycerate mutase family ACICU_01700 SM00382 ATPases associated with a variety of cellular activities ACICU_01708 SM01324 ACICU_01708 ACICU_01719 SM00493 ACICU_01719 ACICU_01720 SM00341 Helicase and RNase D C-terminal ACICU_01720 SM00474 3'-5' exonuclease ACICU_01726 SM00382 ATPases associated with a variety of cellular activities ACICU_01731 SM00267 diguanylate cyclase ACICU_01734 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_01736 SM00861 Transketolase, pyrimidine binding domain ACICU_01740 SM00829 Enoylreductase ACICU_01742 SM00382 ATPases associated with a variety of cellular activities ACICU_01743 SM00849 Metallo-beta-lactamase superfamily ACICU_01748 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01752 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01752 SM00866 ACICU_01752 ACICU_01757 SM00382 ATPases associated with a variety of cellular activities ACICU_01758 SM00567 E-Z type HEAT repeats ACICU_01769 SM00882 Coenzyme A transferase ACICU_01770 SM00882 Coenzyme A transferase ACICU_01775 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01780 SM00903 Flavin reductase like domain ACICU_01782 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01789 SM00382 ATPases associated with a variety of cellular activities ACICU_01798 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_01803 SM00155 Phospholipase D. Active site motifs. ACICU_01808 SM00829 Enoylreductase ACICU_01826 SM00448 cheY-homologous receiver domain ACICU_01826 SM00862 Transcriptional regulatory protein, C terminal ACICU_01827 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACICU_01827 SM00387 Histidine kinase-like ATPases ACICU_01827 SM00388 His Kinase A (phosphoacceptor) domain ACICU_01829 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01831 SM00822 ACICU_01831 ACICU_01832 SM00822 ACICU_01832 ACICU_01840 SM00530 Helix-turn-helix XRE-family like proteins ACICU_01851 SM00421 helix_turn_helix, Lux Regulon ACICU_01869 SM01400 ACICU_01869 ACICU_01871 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01873 SM00382 ATPases associated with a variety of cellular activities ACICU_01877 SM00829 Enoylreductase ACICU_01880 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01897 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_01903 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01903 SM00866 ACICU_01903 ACICU_01911 SM00912 haemagglutination activity domain ACICU_01926 SM00422 helix_turn_helix, mercury resistance ACICU_01930 SM00347 helix_turn_helix multiple antibiotic resistance protein ACICU_01934 SM01060 ACICU_01934 ACICU_01938 SM00829 Enoylreductase ACICU_01942 SM00091 PAS domain ACICU_01942 SM00382 ATPases associated with a variety of cellular activities ACICU_01946 SM00855 Phosphoglycerate mutase family ACICU_01953 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_01953 SM00895 ACICU_01953 ACICU_01956 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACICU_01959 SM00882 Coenzyme A transferase ACICU_01960 SM00882 Coenzyme A transferase ACICU_01967 SM00342 helix_turn_helix, arabinose operon control protein ACICU_01968 SM00903 Flavin reductase like domain ACICU_01977 SM00347 helix_turn_helix multiple antibiotic resistance protein ACICU_01981 SM00855 Phosphoglycerate mutase family ACICU_01985 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_01986 SM00849 Metallo-beta-lactamase superfamily ACICU_01990 SM00564 beta-propeller repeat ACICU_01992 SM00710 Parallel beta-helix repeats ACICU_01999 SM00998 Adenylosuccinate lyase C-terminus ACICU_02001 SM00882 Coenzyme A transferase ACICU_02002 SM00882 Coenzyme A transferase ACICU_02003 SM00882 Coenzyme A transferase ACICU_02007 SM01192 ACICU_02007 ACICU_02007 SM01193 ACICU_02007 ACICU_02020 SM00382 ATPases associated with a variety of cellular activities ACICU_02020 SM01086 C-terminal, D2-small domain, of ClpB protein ACICU_02023 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACICU_02031 SM01264 ACICU_02031 ACICU_02045 SM00382 ATPases associated with a variety of cellular activities ACICU_02045 SM00962 SRP54-type protein, GTPase domain ACICU_02045 SM00963 SRP54-type protein, helical bundle domain ACICU_02050 SM00116 Domain in cystathionine beta-synthase and other proteins. ACICU_02066 SM00347 helix_turn_helix multiple antibiotic resistance protein ACICU_02068 SM00052 Putative diguanylate phosphodiesterase ACICU_02068 SM00091 PAS domain ACICU_02068 SM00267 diguanylate cyclase ACICU_02078 SM00344 helix_turn_helix ASNC type ACICU_02084 SM00363 S4 RNA-binding domain ACICU_02085 SM00382 ATPases associated with a variety of cellular activities ACICU_02091 SM00935 Outer membrane protein (OmpH-like) ACICU_02093 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACICU_02099 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_02100 SM00091 PAS domain ACICU_02100 SM00387 Histidine kinase-like ATPases ACICU_02100 SM00388 His Kinase A (phosphoacceptor) domain ACICU_02101 SM00382 ATPases associated with a variety of cellular activities ACICU_02101 SM00448 cheY-homologous receiver domain ACICU_02119 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_02121 SM00852 Probable molybdopterin binding domain ACICU_02122 SM00852 Probable molybdopterin binding domain ACICU_02126 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACICU_02128 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACICU_02132 SM00448 cheY-homologous receiver domain ACICU_02132 SM01012 ACICU_02132 ACICU_02137 SM00878 Biotin carboxylase C-terminal domain ACICU_02156 SM00487 DEAD-like helicases superfamily ACICU_02204 SM00530 Helix-turn-helix XRE-family like proteins ACICU_02208 SM00382 ATPases associated with a variety of cellular activities ACICU_02225 SM00479 ACICU_02225 ACICU_02236 SM01236 ACICU_02236 ACICU_02243 SM00226 Low molecular weight phosphatase family ACICU_02248 SM00382 ATPases associated with a variety of cellular activities ACICU_02253 SM00822 ACICU_02253 ACICU_02259 SM00344 helix_turn_helix ASNC type ACICU_02262 SM00831 Cation transporter/ATPase, N-terminus ACICU_02268 SM00382 ATPases associated with a variety of cellular activities ACICU_02283 SM00344 helix_turn_helix ASNC type ACICU_02284 SM00830 Chorismate mutase type II ACICU_02292 SM00342 helix_turn_helix, arabinose operon control protein ACICU_02292 SM00871 Bacterial transcription activator, effector binding domain ACICU_02294 SM00382 ATPases associated with a variety of cellular activities ACICU_02297 SM00862 Transcriptional regulatory protein, C terminal ACICU_02312 SM00853 MutL C terminal dimerisation domain ACICU_02312 SM01340 ACICU_02312 ACICU_02317 SM00363 S4 RNA-binding domain ACICU_02336 SM01230 ACICU_02336 ACICU_02337 SM00448 cheY-homologous receiver domain ACICU_02337 SM00862 Transcriptional regulatory protein, C terminal ACICU_02338 SM00387 Histidine kinase-like ATPases ACICU_02338 SM00388 His Kinase A (phosphoacceptor) domain ACICU_02343 SM00905 Dihydroneopterin aldolase ACICU_02346 SM00903 Flavin reductase like domain ACICU_02349 SM00822 ACICU_02349 ACICU_02350 SM00342 helix_turn_helix, arabinose operon control protein ACICU_02351 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_02354 SM00937 ACICU_02354 ACICU_02378 SM01005 Alanine racemase, C-terminal domain ACICU_02380 SM00460 Transglutaminase/protease-like homologues ACICU_02384 SM01228 ACICU_02384 ACICU_02389 SM00798 AICARFT/IMPCHase bienzyme ACICU_02389 SM00851 MGS-like domain ACICU_02390 SM01209 ACICU_02390 ACICU_02390 SM01210 ACICU_02390 ACICU_02392 SM00382 ATPases associated with a variety of cellular activities ACICU_02392 SM00930 ACICU_02392 ACICU_02394 SM00849 Metallo-beta-lactamase superfamily ACICU_02414 SM00972 Spore Coat Protein U domain ACICU_02420 SM00972 Spore Coat Protein U domain ACICU_02423 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_02423 SM00895 ACICU_02423 ACICU_02427 SM00342 helix_turn_helix, arabinose operon control protein ACICU_02430 SM01034 Sensors of blue-light using FAD ACICU_02441 SM00220 Serine/Threonine protein kinases, catalytic domain ACICU_02457 SM00855 Phosphoglycerate mutase family ACICU_02461 SM00487 DEAD-like helicases superfamily ACICU_02461 SM00490 helicase superfamily c-terminal domain ACICU_02462 SM00357 Cold shock protein domain ACICU_02475 SM00830 Chorismate mutase type II ACICU_02486 SM00387 Histidine kinase-like ATPases ACICU_02486 SM00388 His Kinase A (phosphoacceptor) domain ACICU_02487 SM00448 cheY-homologous receiver domain ACICU_02487 SM00862 Transcriptional regulatory protein, C terminal ACICU_02489 SM00382 ATPases associated with a variety of cellular activities ACICU_02494 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_02498 SM00382 ATPases associated with a variety of cellular activities ACICU_02501 SM00062 Bacterial periplasmic substrate-binding proteins ACICU_02510 SM00479 ACICU_02510 ACICU_02512 SM00382 ATPases associated with a variety of cellular activities ACICU_02522 SM00342 helix_turn_helix, arabinose operon control protein ACICU_02532 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_02536 SM00996 S-adenosyl-L-homocysteine hydrolase ACICU_02536 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACICU_02539 SM00052 Putative diguanylate phosphodiesterase ACICU_02539 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACICU_02539 SM00091 PAS domain ACICU_02539 SM00267 diguanylate cyclase ACICU_02540 SM00919 Malic enzyme, NAD binding domain ACICU_02540 SM01274 ACICU_02540 ACICU_02542 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACICU_02550 SM01230 ACICU_02550 ACICU_02558 SM00463 Small MutS-related domain ACICU_02560 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACICU_02561 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACICU_02573 SM00382 ATPases associated with a variety of cellular activities ACICU_02574 SM00382 ATPases associated with a variety of cellular activities ACICU_02583 SM00382 ATPases associated with a variety of cellular activities ACICU_02598 SM00829 Enoylreductase ACICU_02599 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACICU_02626 SM00841 Elongation factor P, C-terminal ACICU_02626 SM01185 ACICU_02626 ACICU_02631 SM00052 Putative diguanylate phosphodiesterase ACICU_02638 SM00257 Lysin motif ACICU_02642 SM00936 Penicillin-binding protein 5, C-terminal domain ACICU_02651 SM00382 ATPases associated with a variety of cellular activities ACICU_02657 SM00344 helix_turn_helix ASNC type ACICU_02669 SM00487 DEAD-like helicases superfamily ACICU_02669 SM00490 helicase superfamily c-terminal domain ACICU_02675 SM01118 ACICU_02675 ACICU_02687 SM01329 ACICU_02687 ACICU_02719 SM00232 JAB/MPN domain ACICU_02755 SM00507 HNH nucleases ACICU_02767 SM00479 ACICU_02767 ACICU_02775 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ACICU_02779 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACICU_02782 SM00487 DEAD-like helicases superfamily ACICU_02782 SM00490 helicase superfamily c-terminal domain ACICU_02784 SM00267 diguanylate cyclase ACICU_02796 SM00358 Double-stranded RNA binding motif ACICU_02796 SM00535 Ribonuclease III family ACICU_02799 SM00838 Elongation factor G C-terminus ACICU_02801 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACICU_02811 SM00382 ATPases associated with a variety of cellular activities ACICU_02827 SM01211 ACICU_02827 ACICU_02828 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACICU_02829 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACICU_02830 SM00382 ATPases associated with a variety of cellular activities ACICU_02855 SM00382 ATPases associated with a variety of cellular activities ACICU_02869 SM00434 DNA Topoisomerase IV ACICU_02870 SM00893 Electron transfer flavoprotein domain ACICU_02871 SM00893 Electron transfer flavoprotein domain ACICU_02878 SM00382 ATPases associated with a variety of cellular activities ACICU_02879 SM00978 ACICU_02879 ACICU_02906 SM00849 Metallo-beta-lactamase superfamily ACICU_02909 SM00883 Chaperonin 10 Kd subunit ACICU_02912 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACICU_02924 SM00382 ATPases associated with a variety of cellular activities ACICU_02926 SM01103 ACICU_02926 ACICU_02929 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACICU_02930 SM00851 MGS-like domain ACICU_02930 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACICU_02936 SM00854 Bacterial capsule synthesis protein PGA_cap ACICU_02951 SM00881 CoA binding domain ACICU_02955 SM00861 Transketolase, pyrimidine binding domain ACICU_02963 SM00450 Rhodanese Homology Domain ACICU_02986 SM00014 Acid phosphatase homologues ACICU_02993 SM00822 ACICU_02993 ACICU_03002 SM00387 Histidine kinase-like ATPases ACICU_03002 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03003 SM00448 cheY-homologous receiver domain ACICU_03003 SM00862 Transcriptional regulatory protein, C terminal ACICU_03007 SM00563 Phosphate acyltransferases ACICU_03010 SM00244 prohibitin homologues ACICU_03016 SM00829 Enoylreductase ACICU_03017 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03021 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03028 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_03035 SM00845 GatB domain ACICU_03059 SM00073 Histidine Phosphotransfer domain ACICU_03059 SM00260 Two component signalling adaptor domain ACICU_03059 SM00387 Histidine kinase-like ATPases ACICU_03059 SM00448 cheY-homologous receiver domain ACICU_03059 SM01231 ACICU_03059 ACICU_03060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACICU_03061 SM00260 Two component signalling adaptor domain ACICU_03062 SM00448 cheY-homologous receiver domain ACICU_03063 SM00448 cheY-homologous receiver domain ACICU_03074 SM00671 Sel1-like repeats. ACICU_03079 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACICU_03079 SM01232 ACICU_03079 ACICU_03083 SM00838 Elongation factor G C-terminus ACICU_03096 SM00564 beta-propeller repeat ACICU_03099 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03110 SM00957 SecA DEAD-like domain ACICU_03110 SM00958 SecA preprotein cross-linking domain ACICU_03112 SM00849 Metallo-beta-lactamase superfamily ACICU_03118 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03130 SM00448 cheY-homologous receiver domain ACICU_03130 SM00862 Transcriptional regulatory protein, C terminal ACICU_03131 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACICU_03131 SM00387 Histidine kinase-like ATPases ACICU_03131 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03157 SM00387 Histidine kinase-like ATPases ACICU_03157 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03165 SM01323 ACICU_03165 ACICU_03171 SM00481 DNA polymerase alpha chain like domain ACICU_03176 SM00450 Rhodanese Homology Domain ACICU_03187 SM00267 diguanylate cyclase ACICU_03190 SM00155 Phospholipase D. Active site motifs. ACICU_03191 SM00563 Phosphate acyltransferases ACICU_03197 SM00650 Ribosomal RNA adenine dimethylases ACICU_03204 SM00878 Biotin carboxylase C-terminal domain ACICU_03219 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ACICU_03225 SM00729 Elongator protein 3, MiaB family, Radical SAM ACICU_03235 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03241 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_03241 SM00955 ACICU_03241 ACICU_03253 SM00662 RNA polymerases D ACICU_03254 SM00363 S4 RNA-binding domain ACICU_03254 SM01390 ACICU_03254 ACICU_03269 SM01374 ACICU_03269 ACICU_03274 SM00322 K homology RNA-binding domain ACICU_03277 SM01382 ACICU_03277 ACICU_03277 SM01383 ACICU_03277 ACICU_03281 SM01403 ACICU_03281 ACICU_03291 SM00563 Phosphate acyltransferases ACICU_03294 SM00487 DEAD-like helicases superfamily ACICU_03294 SM00490 helicase superfamily c-terminal domain ACICU_03303 SM00382 ATPases associated with a variety of cellular activities ACICU_03305 SM00487 DEAD-like helicases superfamily ACICU_03305 SM00490 helicase superfamily c-terminal domain ACICU_03307 SM00861 Transketolase, pyrimidine binding domain ACICU_03315 SM00116 Domain in cystathionine beta-synthase and other proteins. ACICU_03335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACICU_03372 SM00072 Guanylate kinase homologues. ACICU_03373 SM01409 ACICU_03373 ACICU_03374 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACICU_03374 SM00954 Region found in RelA / SpoT proteins ACICU_03390 SM00965 Secretin and TonB N terminus short domain ACICU_03394 SM00842 Cell division protein FtsA ACICU_03418 SM00671 Sel1-like repeats. ACICU_03419 SM00382 ATPases associated with a variety of cellular activities ACICU_03422 SM00947 Carbonic anhydrase ACICU_03423 SM00316 Ribosomal protein S1-like RNA-binding domain ACICU_03423 SM00732 Likely ribonuclease with RNase H fold. ACICU_03424 SM00448 cheY-homologous receiver domain ACICU_03424 SM00862 Transcriptional regulatory protein, C terminal ACICU_03425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACICU_03425 SM00387 Histidine kinase-like ATPases ACICU_03425 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03433 SM00474 3'-5' exonuclease ACICU_03435 SM00530 Helix-turn-helix XRE-family like proteins ACICU_03438 SM00357 Cold shock protein domain ACICU_03442 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03446 SM00477 DNA/RNA non-specific endonuclease ACICU_03446 SM00892 DNA/RNA non-specific endonuclease ACICU_03449 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03462 SM00342 helix_turn_helix, arabinose operon control protein ACICU_03478 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_03480 SM00530 Helix-turn-helix XRE-family like proteins ACICU_03489 SM00829 Enoylreductase ACICU_03492 SM00267 diguanylate cyclase ACICU_03498 SM00387 Histidine kinase-like ATPases ACICU_03498 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03498 SM00448 cheY-homologous receiver domain ACICU_03500 SM00421 helix_turn_helix, Lux Regulon ACICU_03500 SM00448 cheY-homologous receiver domain ACICU_03503 SM00344 helix_turn_helix ASNC type ACICU_03511 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACICU_03513 SM00937 ACICU_03513 ACICU_03518 SM00116 Domain in cystathionine beta-synthase and other proteins. ACICU_03518 SM01240 ACICU_03518 ACICU_03520 SM00849 Metallo-beta-lactamase superfamily ACICU_03529 SM00864 Tubulin/FtsZ family, GTPase domain ACICU_03529 SM00865 Tubulin/FtsZ family, C-terminal domain ACICU_03530 SM00842 Cell division protein FtsA ACICU_03543 SM00267 diguanylate cyclase ACICU_03556 SM00387 Histidine kinase-like ATPases ACICU_03556 SM00433 TopoisomeraseII ACICU_03562 SM00257 Lysin motif ACICU_03573 SM00448 cheY-homologous receiver domain ACICU_03573 SM00862 Transcriptional regulatory protein, C terminal ACICU_03574 SM00387 Histidine kinase-like ATPases ACICU_03574 SM00388 His Kinase A (phosphoacceptor) domain ACICU_03579 SM00450 Rhodanese Homology Domain ACICU_03581 SM00248 ankyrin repeats ACICU_03582 SM01060 ACICU_03582 ACICU_03604 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_03604 SM00866 ACICU_03604 ACICU_03606 SM00833 Cobalamin synthesis protein cobW C-terminal domain ACICU_03613 SM00346 helix_turn_helix isocitrate lyase regulation ACICU_03619 SM01130 ACICU_03619 ACICU_03624 SM00382 ATPases associated with a variety of cellular activities ACICU_03630 SM00478 endonuclease III ACICU_03630 SM00525 ACICU_03630 ACICU_03634 SM00829 Enoylreductase ACICU_03635 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACICU_03644 SM00271 DnaJ molecular chaperone homology domain ACICU_03669 SM00382 ATPases associated with a variety of cellular activities ACICU_p0014 SM00857 Resolvase, N terminal domain ACICU_p0015 SM00671 Sel1-like repeats. ACICU_p0029 SM00530 Helix-turn-helix XRE-family like proteins ACICU_p0040 SM00318 Staphylococcal nuclease homologues ACICU_p0041 SM00528 Domain in histone-like proteins of HNS family ACICU_p0048 SM00470 ParB-like nuclease domain ACICU_p0067 SM00857 Resolvase, N terminal domain