locus-tag class description DMO12_00003 PF00579 tRNA synthetases class I (W and Y) DMO12_00006 PF03702 Anhydro-N-acetylmuramic acid kinase DMO12_00009 PF00561 alpha/beta hydrolase fold DMO12_00012 PF01521 Iron-sulphur cluster biosynthesis DMO12_00024 PF12848 ABC transporter DMO12_00024 PF00005 ABC transporter DMO12_00027 PF09335 SNARE associated Golgi protein DMO12_00033 PF18053 DNA gyrase B subunit insert domain DMO12_00033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_00033 PF01751 Toprim domain DMO12_00033 PF00986 DNA gyrase B subunit, carboxyl terminus DMO12_00033 PF00204 DNA gyrase B DMO12_00036 PF02463 RecF/RecN/SMC N terminal domain DMO12_00039 PF00712 DNA polymerase III beta subunit, N-terminal domain DMO12_00039 PF02767 DNA polymerase III beta subunit, central domain DMO12_00039 PF02768 DNA polymerase III beta subunit, C-terminal domain DMO12_00042 PF00308 Bacterial dnaA protein DMO12_00042 PF08299 Bacterial dnaA protein helix-turn-helix DMO12_00042 PF11638 DnaA N-terminal domain DMO12_00045 PF00468 Ribosomal protein L34 DMO12_00048 PF00825 Ribonuclease P DMO12_00051 PF01809 Putative membrane protein insertion efficiency factor DMO12_00054 PF02096 60Kd inner membrane protein DMO12_00054 PF14849 YidC periplasmic domain DMO12_00057 PF12631 MnmE helical domain DMO12_00057 PF10396 GTP-binding protein TrmE N-terminus DMO12_00057 PF01926 50S ribosome-binding GTPase DMO12_00060 PF02583 Metal-sensitive transcriptional repressor DMO12_00063 PF01545 Cation efflux family DMO12_00063 PF16916 Dimerisation domain of Zinc Transporter DMO12_00066 PF13098 Thioredoxin-like domain DMO12_00066 PF10411 Disulfide bond isomerase protein N-terminus DMO12_00072 PF00156 Phosphoribosyl transferase domain DMO12_00078 PF01979 Amidohydrolase family DMO12_00081 PF00355 Rieske [2Fe-2S] domain DMO12_00084 PF03738 Glutathionylspermidine synthase preATP-grasp DMO12_00093 PF03741 Integral membrane protein TerC family DMO12_00096 PF01569 PAP2 superfamily DMO12_00102 PF01225 Mur ligase family, catalytic domain DMO12_00102 PF02875 Mur ligase family, glutamate ligase domain DMO12_00102 PF08245 Mur ligase middle domain DMO12_00108 PF00731 AIR carboxylase DMO12_00111 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DMO12_00111 PF02222 ATP-grasp domain DMO12_00114 PF13406 Transglycosylase SLT domain DMO12_00126 PF00012 Hsp70 protein DMO12_00129 PF01025 GrpE DMO12_00132 PF03466 LysR substrate binding domain DMO12_00132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_00144 PF07859 alpha/beta hydrolase fold DMO12_00147 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DMO12_00171 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_00174 PF01252 Signal peptidase (SPase) II DMO12_00177 PF08264 Anticodon-binding domain of tRNA DMO12_00177 PF00133 tRNA synthetases class I (I, L, M and V) DMO12_00177 PF06827 Zinc finger found in FPG and IleRS DMO12_00180 PF06574 FAD synthetase DMO12_00180 PF01687 Riboflavin kinase DMO12_00186 PF01048 Phosphorylase superfamily DMO12_00189 PF08362 YcdC-like protein, C-terminal region DMO12_00189 PF00440 Bacterial regulatory proteins, tetR family DMO12_00192 PF00005 ABC transporter DMO12_00195 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_00198 PF00296 Luciferase-like monooxygenase DMO12_00201 PF09084 NMT1/THI5 like DMO12_00204 PF09084 NMT1/THI5 like DMO12_00207 PF00696 Amino acid kinase family DMO12_00207 PF00583 Acetyltransferase (GNAT) family DMO12_00216 PF00106 short chain dehydrogenase DMO12_00219 PF13419 Haloacid dehalogenase-like hydrolase DMO12_00225 PF01323 DSBA-like thioredoxin domain DMO12_00228 PF00440 Bacterial regulatory proteins, tetR family DMO12_00228 PF08360 QacR-like protein, C-terminal region DMO12_00231 PF00440 Bacterial regulatory proteins, tetR family DMO12_00234 PF00175 Oxidoreductase NAD-binding domain DMO12_00237 PF00487 Fatty acid desaturase DMO12_00240 PF03725 3' exoribonuclease family, domain 2 DMO12_00240 PF01138 3' exoribonuclease family, domain 1 DMO12_00243 PF04185 Phosphoesterase family DMO12_00243 PF05506 Domain of unknown function (DUF756) DMO12_00249 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DMO12_00249 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DMO12_00252 PF01510 N-acetylmuramoyl-L-alanine amidase DMO12_00255 PF03023 Lipid II flippase MurJ DMO12_00258 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_00258 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DMO12_00261 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_00261 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DMO12_00264 PF02706 Chain length determinant protein DMO12_00264 PF13807 G-rich domain on putative tyrosine kinase DMO12_00264 PF13614 AAA domain DMO12_00267 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMO12_00270 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DMO12_00270 PF02563 Polysaccharide biosynthesis/export protein DMO12_00270 PF10531 SLBB domain DMO12_00273 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMO12_00273 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMO12_00273 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMO12_00276 PF02719 Polysaccharide biosynthesis protein DMO12_00279 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMO12_00282 PF02348 Cytidylyltransferase DMO12_00291 PF03102 NeuB family DMO12_00291 PF08666 SAF domain DMO12_00309 PF00535 Glycosyl transferase family 2 DMO12_00312 PF02397 Bacterial sugar transferase DMO12_00315 PF00483 Nucleotidyl transferase DMO12_00318 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMO12_00318 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMO12_00318 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMO12_00321 PF00342 Phosphoglucose isomerase DMO12_00324 PF16363 GDP-mannose 4,6 dehydratase DMO12_00327 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMO12_00327 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMO12_00327 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMO12_00327 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMO12_00330 PF02652 L-lactate permease DMO12_00333 PF00392 Bacterial regulatory proteins, gntR family DMO12_00333 PF07729 FCD domain DMO12_00336 PF01070 FMN-dependent dehydrogenase DMO12_00339 PF01565 FAD binding domain DMO12_00339 PF09330 D-lactate dehydrogenase, membrane binding DMO12_00342 PF00155 Aminotransferase class I and II DMO12_00345 PF07729 FCD domain DMO12_00345 PF00392 Bacterial regulatory proteins, gntR family DMO12_00351 PF00285 Citrate synthase, C-terminal domain DMO12_00354 PF00330 Aconitase family (aconitate hydratase) DMO12_00354 PF00694 Aconitase C-terminal domain DMO12_00375 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_00375 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_00399 PF00849 RNA pseudouridylate synthase DMO12_00408 PF00593 TonB dependent receptor DMO12_00408 PF07715 TonB-dependent Receptor Plug Domain DMO12_00414 PF01037 Lrp/AsnC ligand binding domain DMO12_00417 PF01266 FAD dependent oxidoreductase DMO12_00420 PF00842 Alanine racemase, C-terminal domain DMO12_00420 PF01168 Alanine racemase, N-terminal domain DMO12_00423 PF01042 Endoribonuclease L-PSP DMO12_00426 PF00324 Amino acid permease DMO12_00429 PF00324 Amino acid permease DMO12_00435 PF00171 Aldehyde dehydrogenase family DMO12_00438 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMO12_00438 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMO12_00441 PF00501 AMP-binding enzyme DMO12_00441 PF13193 AMP-binding enzyme C-terminal domain DMO12_00444 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_00444 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_00444 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_00447 PF00378 Enoyl-CoA hydratase/isomerase DMO12_00450 PF00378 Enoyl-CoA hydratase/isomerase DMO12_00453 PF07690 Major Facilitator Superfamily DMO12_00453 PF00083 Sugar (and other) transporter DMO12_00456 PF00765 Autoinducer synthase DMO12_00462 PF00196 Bacterial regulatory proteins, luxR family DMO12_00462 PF03472 Autoinducer binding domain DMO12_00465 PF00501 AMP-binding enzyme DMO12_00468 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_00468 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_00468 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_00471 PF08242 Methyltransferase domain DMO12_00471 PF00975 Thioesterase domain DMO12_00471 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_00471 PF00550 Phosphopantetheine attachment site DMO12_00471 PF14765 Polyketide synthase dehydratase DMO12_00471 PF16197 Ketoacyl-synthetase C-terminal extension DMO12_00471 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_00474 PF00668 Condensation domain DMO12_00474 PF00501 AMP-binding enzyme DMO12_00474 PF00550 Phosphopantetheine attachment site DMO12_00474 PF13193 AMP-binding enzyme C-terminal domain DMO12_00474 PF00975 Thioesterase domain DMO12_00483 PF16363 GDP-mannose 4,6 dehydratase DMO12_00486 PF01648 4'-phosphopantetheinyl transferase superfamily DMO12_00492 PF01722 BolA-like protein DMO12_00498 PF13614 AAA domain DMO12_00507 PF09335 SNARE associated Golgi protein DMO12_00510 PF07681 DoxX DMO12_00513 PF04286 Protein of unknown function (DUF445) DMO12_00516 PF02540 NAD synthase DMO12_00516 PF00958 GMP synthase C terminal domain DMO12_00516 PF00117 Glutamine amidotransferase class-I DMO12_00519 PF01909 Nucleotidyltransferase domain DMO12_00519 PF13427 Domain of unknown function (DUF4111) DMO12_00522 PF03551 Transcriptional regulator PadR-like family DMO12_00528 PF02678 Pirin DMO12_00528 PF05726 Pirin C-terminal cupin domain DMO12_00540 PF00750 tRNA synthetases class I (R) DMO12_00540 PF05746 DALR anticodon binding domain DMO12_00540 PF03485 Arginyl tRNA synthetase N terminal domain DMO12_00543 PF00390 Malic enzyme, N-terminal domain DMO12_00543 PF03949 Malic enzyme, NAD binding domain DMO12_00546 PF04261 Dyp-type peroxidase family DMO12_00549 PF01810 LysE type translocator DMO12_00552 PF00950 ABC 3 transport family DMO12_00555 PF00005 ABC transporter DMO12_00567 PF00119 ATP synthase A chain DMO12_00570 PF00137 ATP synthase subunit C DMO12_00573 PF00430 ATP synthase B/B' CF(0) DMO12_00576 PF00213 ATP synthase delta (OSCP) subunit DMO12_00579 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMO12_00579 PF00306 ATP synthase alpha/beta chain, C terminal domain DMO12_00579 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMO12_00582 PF00231 ATP synthase DMO12_00585 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMO12_00585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMO12_00588 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DMO12_00591 PF11008 Protein of unknown function (DUF2846) DMO12_00597 PF00255 Glutathione peroxidase DMO12_00603 PF07690 Major Facilitator Superfamily DMO12_00606 PF00440 Bacterial regulatory proteins, tetR family DMO12_00609 PF00892 EamA-like transporter family DMO12_00612 PF01300 Telomere recombination DMO12_00615 PF17782 DprA winged helix domain DMO12_00615 PF02481 DNA recombination-mediator protein A DMO12_00621 PF01327 Polypeptide deformylase DMO12_00636 PF00440 Bacterial regulatory proteins, tetR family DMO12_00657 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_00663 PF03358 NADPH-dependent FMN reductase DMO12_00675 PF11842 Domain of unknown function (DUF3362) DMO12_00675 PF08497 Radical SAM N-terminal DMO12_00675 PF04055 Radical SAM superfamily DMO12_00684 PF00817 impB/mucB/samB family DMO12_00684 PF11799 impB/mucB/samB family C-terminal domain DMO12_00684 PF11798 IMS family HHH motif DMO12_00690 PF07690 Major Facilitator Superfamily DMO12_00693 PF03641 Possible lysine decarboxylase DMO12_00696 PF03471 Transporter associated domain DMO12_00696 PF03741 Integral membrane protein TerC family DMO12_00699 PF02810 SEC-C motif DMO12_00702 PF03458 UPF0126 domain DMO12_00705 PF07690 Major Facilitator Superfamily DMO12_00708 PF00521 DNA gyrase/topoisomerase IV, subunit A DMO12_00708 PF03989 DNA gyrase C-terminal domain, beta-propeller DMO12_00711 PF00501 AMP-binding enzyme DMO12_00711 PF13193 AMP-binding enzyme C-terminal domain DMO12_00720 PF00719 Inorganic pyrophosphatase DMO12_00723 PF03573 outer membrane porin, OprD family DMO12_00726 PF13610 DDE domain DMO12_00729 PF00563 EAL domain DMO12_00729 PF11809 Domain of unknown function (DUF3330) DMO12_00732 PF00589 Phage integrase family DMO12_00732 PF13495 Phage integrase, N-terminal SAM-like domain DMO12_00741 PF00905 Penicillin binding protein transpeptidase domain DMO12_00744 PF00893 Small Multidrug Resistance protein DMO12_00747 PF00809 Pterin binding enzyme DMO12_00756 PF02796 Helix-turn-helix domain of resolvase DMO12_00756 PF00239 Resolvase, N terminal domain DMO12_00759 PF03743 Bacterial conjugation TrbI-like protein DMO12_00762 PF13411 MerR HTH family regulatory protein DMO12_00768 PF01252 Signal peptidase (SPase) II DMO12_00777 PF01740 STAS domain DMO12_00777 PF00916 Sulfate permease family DMO12_00783 PF01078 Magnesium chelatase, subunit ChlI DMO12_00783 PF13335 Magnesium chelatase, subunit ChlI C-terminal DMO12_00789 PF00543 Nitrogen regulatory protein P-II DMO12_00792 PF00909 Ammonium Transporter Family DMO12_00795 PF03477 ATP cone domain DMO12_00798 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMO12_00798 PF01872 RibD C-terminal domain DMO12_00804 PF00677 Lumazine binding domain DMO12_00816 PF02789 Cytosol aminopeptidase family, N-terminal domain DMO12_00816 PF00883 Cytosol aminopeptidase family, catalytic domain DMO12_00822 PF03739 Lipopolysaccharide export system permease LptF/LptG DMO12_00825 PF01676 Metalloenzyme superfamily DMO12_00825 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DMO12_00828 PF00595 PDZ domain DMO12_00828 PF03572 Peptidase family S41 DMO12_00831 PF02954 Bacterial regulatory protein, Fis family DMO12_00831 PF00158 Sigma-54 interaction domain DMO12_00831 PF00072 Response regulator receiver domain DMO12_00834 PF00512 His Kinase A (phospho-acceptor) domain DMO12_00834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_00837 PF00196 Bacterial regulatory proteins, luxR family DMO12_00837 PF00072 Response regulator receiver domain DMO12_00840 PF00768 D-alanyl-D-alanine carboxypeptidase DMO12_00843 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_00846 PF01842 ACT domain DMO12_00846 PF00742 Homoserine dehydrogenase DMO12_00846 PF03447 Homoserine dehydrogenase, NAD binding domain DMO12_00849 PF13098 Thioredoxin-like domain DMO12_00849 PF10411 Disulfide bond isomerase protein N-terminus DMO12_00852 PF00589 Phage integrase family DMO12_00852 PF02899 Phage integrase, N-terminal SAM-like domain DMO12_00858 PF07664 Ferrous iron transport protein B C terminus DMO12_00858 PF02421 Ferrous iron transport protein B DMO12_00858 PF07670 Nucleoside recognition DMO12_00864 PF08245 Mur ligase middle domain DMO12_00864 PF02875 Mur ligase family, glutamate ligase domain DMO12_00867 PF01098 Cell cycle protein DMO12_00870 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMO12_00873 PF01258 Prokaryotic dksA/traR C4-type zinc finger DMO12_00876 PF00149 Calcineurin-like phosphoesterase DMO12_00879 PF00293 NUDIX domain DMO12_00882 PF01964 Radical SAM ThiC family DMO12_00882 PF13667 ThiC-associated domain DMO12_00891 PF00892 EamA-like transporter family DMO12_00894 PF02321 Outer membrane efflux protein DMO12_00897 PF01895 PhoU domain DMO12_00900 PF04362 Bacterial Fe(2+) trafficking DMO12_00903 PF14698 Argininosuccinate lyase C-terminal DMO12_00903 PF00206 Lyase DMO12_00906 PF06580 Histidine kinase DMO12_00906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_00906 PF07694 5TMR of 5TMR-LYT DMO12_00909 PF00072 Response regulator receiver domain DMO12_00909 PF04397 LytTr DNA-binding domain DMO12_00912 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DMO12_00912 PF03900 Porphobilinogen deaminase, C-terminal domain DMO12_00927 PF00816 H-NS histone family DMO12_00936 PF03958 Bacterial type II/III secretion system short domain DMO12_00936 PF00263 Bacterial type II and III secretion system protein DMO12_00939 PF12401 Protein of unknown function (DUF2662) DMO12_00939 PF00498 FHA domain DMO12_00942 PF13419 Haloacid dehalogenase-like hydrolase DMO12_00945 PF04715 Anthranilate synthase component I, N terminal region DMO12_00945 PF00425 chorismate binding enzyme DMO12_00960 PF00009 Elongation factor Tu GTP binding domain DMO12_00960 PF03143 Elongation factor Tu C-terminal domain DMO12_00960 PF03144 Elongation factor Tu domain 2 DMO12_00966 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DMO12_00969 PF00467 KOW motif DMO12_00969 PF02357 Transcription termination factor nusG DMO12_00972 PF03946 Ribosomal protein L11, N-terminal domain DMO12_00972 PF00298 Ribosomal protein L11, RNA binding domain DMO12_00975 PF00687 Ribosomal protein L1p/L10e family DMO12_00978 PF00466 Ribosomal protein L10 DMO12_00981 PF00542 Ribosomal protein L7/L12 C-terminal domain DMO12_00981 PF16320 Ribosomal protein L7/L12 dimerisation domain DMO12_00984 PF04561 RNA polymerase Rpb2, domain 2 DMO12_00984 PF04560 RNA polymerase Rpb2, domain 7 DMO12_00984 PF00562 RNA polymerase Rpb2, domain 6 DMO12_00984 PF04563 RNA polymerase beta subunit DMO12_00984 PF10385 RNA polymerase beta subunit external 1 domain DMO12_00984 PF04565 RNA polymerase Rpb2, domain 3 DMO12_00987 PF04997 RNA polymerase Rpb1, domain 1 DMO12_00987 PF04998 RNA polymerase Rpb1, domain 5 DMO12_00987 PF04983 RNA polymerase Rpb1, domain 3 DMO12_00987 PF05000 RNA polymerase Rpb1, domain 4 DMO12_00987 PF00623 RNA polymerase Rpb1, domain 2 DMO12_00999 PF00561 alpha/beta hydrolase fold DMO12_01002 PF13726 Na+-H+ antiporter family DMO12_01002 PF03553 Na+/H+ antiporter family DMO12_01011 PF00183 Hsp90 protein DMO12_01011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_01020 PF01323 DSBA-like thioredoxin domain DMO12_01026 PF00376 MerR family regulatory protein DMO12_01026 PF09278 MerR, DNA binding DMO12_01038 PF02803 Thiolase, C-terminal domain DMO12_01038 PF00108 Thiolase, N-terminal domain DMO12_01041 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMO12_01041 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMO12_01041 PF00378 Enoyl-CoA hydratase/isomerase DMO12_01056 PF01541 GIY-YIG catalytic domain DMO12_01056 PF02151 UvrB/uvrC motif DMO12_01056 PF08459 UvrC Helix-hairpin-helix N-terminal DMO12_01062 PF01066 CDP-alcohol phosphatidyltransferase DMO12_01065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMO12_01065 PF12833 Helix-turn-helix domain DMO12_01065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DMO12_01065 PF02805 Metal binding domain of Ada DMO12_01080 PF13533 Biotin-lipoyl like DMO12_01083 PF03652 Holliday junction resolvase DMO12_01086 PF02622 Uncharacterized ACR, COG1678 DMO12_01089 PF02463 RecF/RecN/SMC N terminal domain DMO12_01095 PF06865 Pyrimidine/purine nucleoside phosphorylase DMO12_01098 PF00588 SpoU rRNA Methylase family DMO12_01098 PF08032 RNA 2'-O ribose methyltransferase substrate binding DMO12_01104 PF01121 Dephospho-CoA kinase DMO12_01107 PF01478 Type IV leader peptidase family DMO12_01107 PF06750 Bacterial Peptidase A24 N-terminal domain DMO12_01110 PF00482 Type II secretion system (T2SS), protein F DMO12_01113 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DMO12_01113 PF00437 Type II/IV secretion system protein DMO12_01116 PF00121 Triosephosphate isomerase DMO12_01119 PF03840 Preprotein translocase SecG subunit DMO12_01131 PF02576 RimP N-terminal domain DMO12_01131 PF17384 RimP C-terminal SH3 domain DMO12_01134 PF13184 NusA-like KH domain DMO12_01134 PF08529 NusA N-terminal domain DMO12_01134 PF00575 S1 RNA binding domain DMO12_01137 PF04760 Translation initiation factor IF-2, N-terminal region DMO12_01137 PF08364 Bacterial translation initiation factor IF-2 associated region DMO12_01137 PF11987 Translation-initiation factor 2 DMO12_01137 PF00009 Elongation factor Tu GTP binding domain DMO12_01140 PF02033 Ribosome-binding factor A DMO12_01146 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DMO12_01152 PF00361 Proton-conducting membrane transporter DMO12_01155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DMO12_01158 PF13244 Domain of unknown function (DUF4040) DMO12_01158 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DMO12_01158 PF00361 Proton-conducting membrane transporter DMO12_01158 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMO12_01167 PF01502 Phosphoribosyl-AMP cyclohydrolase DMO12_01170 PF01494 FAD binding domain DMO12_01173 PF03109 ABC1 family DMO12_01179 PF01209 ubiE/COQ5 methyltransferase family DMO12_01185 PF03976 Polyphosphate kinase 2 (PPK2) DMO12_01191 PF17946 RecC C-terminal domain DMO12_01194 PF13361 UvrD-like helicase C-terminal domain DMO12_01194 PF12705 PD-(D/E)XK nuclease superfamily DMO12_01194 PF00580 UvrD/REP helicase N-terminal domain DMO12_01197 PF13538 UvrD-like helicase C-terminal domain DMO12_01203 PF00312 Ribosomal protein S15 DMO12_01206 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DMO12_01206 PF01138 3' exoribonuclease family, domain 1 DMO12_01206 PF03725 3' exoribonuclease family, domain 2 DMO12_01206 PF00013 KH domain DMO12_01206 PF00575 S1 RNA binding domain DMO12_01209 PF01544 CorA-like Mg2+ transporter protein DMO12_01215 PF01556 DnaJ C terminal domain DMO12_01215 PF00226 DnaJ domain DMO12_01221 PF01430 Hsp33 protein DMO12_01224 PF00999 Sodium/hydrogen exchanger family DMO12_01224 PF02254 TrkA-N domain DMO12_01227 PF00270 DEAD/DEAH box helicase DMO12_01227 PF00271 Helicase conserved C-terminal domain DMO12_01227 PF17764 3′ DNA-binding domain (3′BD) DMO12_01227 PF18074 Primosomal protein N C-terminal domain DMO12_01227 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DMO12_01230 PF00482 Type II secretion system (T2SS), protein F DMO12_01233 PF08334 Type II secretion system (T2SS), protein G DMO12_01233 PF07963 Prokaryotic N-terminal methylation motif DMO12_01239 PF01588 Putative tRNA binding domain DMO12_01242 PF00795 Carbon-nitrogen hydrolase DMO12_01245 PF03471 Transporter associated domain DMO12_01245 PF00571 CBS domain DMO12_01248 PF01206 Sulfurtransferase TusA DMO12_01257 PF01177 Asp/Glu/Hydantoin racemase DMO12_01263 PF00762 Ferrochelatase DMO12_01266 PF00753 Metallo-beta-lactamase superfamily DMO12_01269 PF03884 DNA gyrase inhibitor YacG DMO12_01281 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DMO12_01287 PF01197 Ribosomal protein L31 DMO12_01290 PF03109 ABC1 family DMO12_01293 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DMO12_01293 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_01296 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DMO12_01296 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_01296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_01299 PF01554 MatE DMO12_01305 PF04055 Radical SAM superfamily DMO12_01305 PF06969 HemN C-terminal domain DMO12_01308 PF00106 short chain dehydrogenase DMO12_01311 PF03466 LysR substrate binding domain DMO12_01311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_01320 PF00501 AMP-binding enzyme DMO12_01320 PF13193 AMP-binding enzyme C-terminal domain DMO12_01323 PF10150 Ribonuclease E/G family DMO12_01323 PF00575 S1 RNA binding domain DMO12_01323 PF12111 Polyribonucleotide phosphorylase C terminal DMO12_01326 PF01479 S4 domain DMO12_01326 PF00849 RNA pseudouridylate synthase DMO12_01329 PF13419 Haloacid dehalogenase-like hydrolase DMO12_01332 PF08279 HTH domain DMO12_01332 PF13280 WYL domain DMO12_01335 PF02798 Glutathione S-transferase, N-terminal domain DMO12_01341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_01341 PF03466 LysR substrate binding domain DMO12_01344 PF12706 Beta-lactamase superfamily domain DMO12_01347 PF00141 Peroxidase DMO12_01350 PF05524 PEP-utilising enzyme, N-terminal DMO12_01350 PF00391 PEP-utilising enzyme, mobile domain DMO12_01350 PF02896 PEP-utilising enzyme, TIM barrel domain DMO12_01350 PF01590 GAF domain DMO12_01353 PF00293 NUDIX domain DMO12_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_01365 PF03466 LysR substrate binding domain DMO12_01371 PF00330 Aconitase family (aconitate hydratase) DMO12_01374 PF00694 Aconitase C-terminal domain DMO12_01380 PF00180 Isocitrate/isopropylmalate dehydrogenase DMO12_01389 PF01176 Translation initiation factor 1A / IF-1 DMO12_01395 PF01416 tRNA pseudouridine synthase DMO12_01407 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMO12_01407 PF02774 Semialdehyde dehydrogenase, dimerisation domain DMO12_01413 PF00375 Sodium:dicarboxylate symporter family DMO12_01419 PF03279 Bacterial lipid A biosynthesis acyltransferase DMO12_01422 PF01810 LysE type translocator DMO12_01431 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_01431 PF00107 Zinc-binding dehydrogenase DMO12_01434 PF01638 HxlR-like helix-turn-helix DMO12_01440 PF01131 DNA topoisomerase DMO12_01440 PF08272 Topoisomerase I zinc-ribbon-like DMO12_01440 PF01396 Topoisomerase DNA binding C4 zinc finger DMO12_01440 PF01751 Toprim domain DMO12_01449 PF00580 UvrD/REP helicase N-terminal domain DMO12_01449 PF13361 UvrD-like helicase C-terminal domain DMO12_01452 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DMO12_01464 PF02254 TrkA-N domain DMO12_01464 PF00999 Sodium/hydrogen exchanger family DMO12_01467 PF00471 Ribosomal protein L33 DMO12_01470 PF00830 Ribosomal L28 family DMO12_01473 PF00171 Aldehyde dehydrogenase family DMO12_01479 PF00551 Formyl transferase DMO12_01479 PF01842 ACT domain DMO12_01485 PF01618 MotA/TolQ/ExbB proton channel family DMO12_01491 PF01625 Peptide methionine sulfoxide reductase DMO12_01497 PF00186 Dihydrofolate reductase DMO12_01500 PF00303 Thymidylate synthase DMO12_01509 PF01790 Prolipoprotein diacylglyceryl transferase DMO12_01521 PF00902 Sec-independent protein translocase protein (TatC) DMO12_01524 PF02416 mttA/Hcf106 family DMO12_01527 PF02416 mttA/Hcf106 family DMO12_01533 PF01725 Ham1 family DMO12_01539 PF07021 Methionine biosynthesis protein MetW DMO12_01539 PF00561 alpha/beta hydrolase fold DMO12_01542 PF00561 alpha/beta hydrolase fold DMO12_01545 PF00682 HMGL-like DMO12_01545 PF08502 LeuA allosteric (dimerisation) domain DMO12_01548 PF18331 PKHD-type hydroxylase C-terminal domain DMO12_01548 PF13640 2OG-Fe(II) oxygenase superfamily DMO12_01551 PF00593 TonB dependent receptor DMO12_01551 PF07715 TonB-dependent Receptor Plug Domain DMO12_01554 PF05697 Bacterial trigger factor protein (TF) DMO12_01554 PF05698 Bacterial trigger factor protein (TF) C-terminus DMO12_01554 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_01557 PF00574 Clp protease DMO12_01560 PF07724 AAA domain (Cdc48 subfamily) DMO12_01560 PF10431 C-terminal, D2-small domain, of ClpB protein DMO12_01560 PF06689 ClpX C4-type zinc finger DMO12_01569 PF05683 Fumarase C-terminus DMO12_01569 PF05681 Fumarate hydratase (Fumerase) DMO12_01572 PF01515 Phosphate acetyl/butaryl transferase DMO12_01572 PF07085 DRTGG domain DMO12_01575 PF00871 Acetokinase family DMO12_01578 PF00920 Dehydratase family DMO12_01581 PF01081 KDPG and KHG aldolase DMO12_01584 PF02447 GntP family permease DMO12_01587 PF01202 Shikimate kinase DMO12_01590 PF00171 Aldehyde dehydrogenase family DMO12_01593 PF00171 Aldehyde dehydrogenase family DMO12_01596 PF00561 alpha/beta hydrolase fold DMO12_01602 PF00933 Glycosyl hydrolase family 3 N terminal domain DMO12_01605 PF11818 C-terminal domain of tail specific protease (DUF3340) DMO12_01605 PF00595 PDZ domain DMO12_01605 PF17804 Tail specific protease N-terminal domain DMO12_01605 PF03572 Peptidase family S41 DMO12_01608 PF13439 Glycosyltransferase Family 4 DMO12_01608 PF00534 Glycosyl transferases group 1 DMO12_01611 PF01569 PAP2 superfamily DMO12_01614 PF04384 Iron-sulphur cluster assembly DMO12_01617 PF00334 Nucleoside diphosphate kinase DMO12_01620 PF04055 Radical SAM superfamily DMO12_01626 PF13464 Domain of unknown function (DUF4115) DMO12_01629 PF04551 GcpE protein DMO12_01632 PF13393 Histidyl-tRNA synthetase DMO12_01632 PF03129 Anticodon binding domain DMO12_01638 PF13360 PQQ-like domain DMO12_01641 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DMO12_01641 PF01926 50S ribosome-binding GTPase DMO12_01650 PF00550 Phosphopantetheine attachment site DMO12_01653 PF00550 Phosphopantetheine attachment site DMO12_01659 PF13193 AMP-binding enzyme C-terminal domain DMO12_01659 PF00501 AMP-binding enzyme DMO12_01668 PF00221 Aromatic amino acid lyase DMO12_01680 PF04820 Tryptophan halogenase DMO12_01686 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_01686 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_01695 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_01695 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_01704 PF02556 Preprotein translocase subunit SecB DMO12_01707 PF00462 Glutaredoxin DMO12_01713 PF03193 RsgA GTPase DMO12_01716 PF00929 Exonuclease DMO12_01725 PF02321 Outer membrane efflux protein DMO12_01728 PF00005 ABC transporter DMO12_01728 PF02687 FtsX-like permease family DMO12_01728 PF12704 MacB-like periplasmic core domain DMO12_01731 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_01740 PF08264 Anticodon-binding domain of tRNA DMO12_01740 PF09334 tRNA synthetases class I (M) DMO12_01740 PF13603 Leucyl-tRNA synthetase, Domain 2 DMO12_01740 PF00133 tRNA synthetases class I (I, L, M and V) DMO12_01746 PF00205 Thiamine pyrophosphate enzyme, central domain DMO12_01746 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMO12_01746 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMO12_01749 PF10369 Small subunit of acetolactate synthase DMO12_01752 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DMO12_01752 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DMO12_01755 PF03707 Bacterial signalling protein N terminal repeat DMO12_01755 PF00990 Diguanylate cyclase, GGDEF domain DMO12_01755 PF00563 EAL domain DMO12_01767 PF00009 Elongation factor Tu GTP binding domain DMO12_01767 PF16658 Class II release factor RF3, C-terminal domain DMO12_01767 PF03144 Elongation factor Tu domain 2 DMO12_01776 PF01026 TatD related DNase DMO12_01779 PF00694 Aconitase C-terminal domain DMO12_01779 PF00330 Aconitase family (aconitate hydratase) DMO12_01785 PF00899 ThiF family DMO12_01788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_01788 PF03466 LysR substrate binding domain DMO12_01794 PF01207 Dihydrouridine synthase (Dus) DMO12_01797 PF07690 Major Facilitator Superfamily DMO12_01803 PF00892 EamA-like transporter family DMO12_01806 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DMO12_01806 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DMO12_01809 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DMO12_01812 PF02233 NAD(P) transhydrogenase beta subunit DMO12_01815 PF00106 short chain dehydrogenase DMO12_01821 PF01261 Xylose isomerase-like TIM barrel DMO12_01824 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMO12_01824 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMO12_01827 PF00378 Enoyl-CoA hydratase/isomerase DMO12_01830 PF01627 Hpt domain DMO12_01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_01830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMO12_01830 PF00072 Response regulator receiver domain DMO12_01830 PF00672 HAMP domain DMO12_01830 PF00512 His Kinase A (phospho-acceptor) domain DMO12_01833 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_01839 PF05958 tRNA (Uracil-5-)-methyltransferase DMO12_01842 PF13291 ACT domain DMO12_01842 PF02824 TGS domain DMO12_01842 PF04607 Region found in RelA / SpoT proteins DMO12_01848 PF03819 MazG nucleotide pyrophosphohydrolase domain DMO12_01854 PF01743 Poly A polymerase head domain DMO12_01854 PF12626 Polymerase A arginine-rich C-terminus DMO12_01854 PF12627 Probable RNA and SrmB- binding site of polymerase A DMO12_01857 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DMO12_01860 PF02548 Ketopantoate hydroxymethyltransferase DMO12_01863 PF02569 Pantoate-beta-alanine ligase DMO12_01866 PF03668 P-loop ATPase protein family DMO12_01869 PF00381 PTS HPr component phosphorylation site DMO12_01872 PF04751 Protein of unknown function (DUF615) DMO12_01875 PF13193 AMP-binding enzyme C-terminal domain DMO12_01875 PF00501 AMP-binding enzyme DMO12_01878 PF02824 TGS domain DMO12_01878 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMO12_01878 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMO12_01878 PF03129 Anticodon binding domain DMO12_01881 PF00707 Translation initiation factor IF-3, C-terminal domain DMO12_01881 PF05198 Translation initiation factor IF-3, N-terminal domain DMO12_01884 PF02798 Glutathione S-transferase, N-terminal domain DMO12_01884 PF00043 Glutathione S-transferase, C-terminal domain DMO12_01887 PF09335 SNARE associated Golgi protein DMO12_01890 PF07690 Major Facilitator Superfamily DMO12_01893 PF01632 Ribosomal protein L35 DMO12_01896 PF00453 Ribosomal protein L20 DMO12_01908 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DMO12_01908 PF01409 tRNA synthetases class II core domain (F) DMO12_01911 PF03147 Ferredoxin-fold anticodon binding domain DMO12_01911 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DMO12_01911 PF01588 Putative tRNA binding domain DMO12_01911 PF03484 tRNA synthetase B5 domain DMO12_01911 PF03483 B3/4 domain DMO12_01914 PF00216 Bacterial DNA-binding protein DMO12_01920 PF07497 Rho termination factor, RNA-binding domain DMO12_01920 PF07498 Rho termination factor, N-terminal domain DMO12_01920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMO12_01923 PF00085 Thioredoxin DMO12_01926 PF02541 Ppx/GppA phosphatase family DMO12_01929 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DMO12_01932 PF11734 TilS substrate C-terminal domain DMO12_01932 PF09179 TilS substrate binding domain DMO12_01932 PF01171 PP-loop family DMO12_01935 PF14748 Pyrroline-5-carboxylate reductase dimerisation DMO12_01935 PF03807 NADP oxidoreductase coenzyme F420-dependent DMO12_01938 PF02325 YGGT family DMO12_01941 PF00476 DNA polymerase family A DMO12_01941 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DMO12_01941 PF01367 5'-3' exonuclease, C-terminal SAM fold DMO12_01941 PF01612 3'-5' exonuclease DMO12_01953 PF00437 Type II/IV secretion system protein DMO12_01956 PF02566 OsmC-like protein DMO12_01959 PF01047 MarR family DMO12_01965 PF00795 Carbon-nitrogen hydrolase DMO12_01992 PF04552 Sigma-54, DNA binding domain DMO12_01992 PF00309 Sigma-54 factor, Activator interacting domain (AID) DMO12_01992 PF04963 Sigma-54 factor, core binding domain DMO12_01995 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DMO12_01998 PF01722 BolA-like protein DMO12_02001 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DMO12_02004 PF01634 ATP phosphoribosyltransferase DMO12_02007 PF00815 Histidinol dehydrogenase DMO12_02010 PF00155 Aminotransferase class I and II DMO12_02013 PF04715 Anthranilate synthase component I, N terminal region DMO12_02013 PF00425 chorismate binding enzyme DMO12_02037 PF00293 NUDIX domain DMO12_02040 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_02043 PF00814 Glycoprotease family DMO12_02046 PF04445 Putative SAM-dependent methyltransferase DMO12_02052 PF00756 Putative esterase DMO12_02058 PF00834 Ribulose-phosphate 3 epimerase family DMO12_02067 PF00394 Multicopper oxidase DMO12_02067 PF07732 Multicopper oxidase DMO12_02067 PF07731 Multicopper oxidase DMO12_02070 PF05275 Copper resistance protein B precursor (CopB) DMO12_02076 PF00893 Small Multidrug Resistance protein DMO12_02079 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DMO12_02079 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMO12_02082 PF01960 ArgJ family DMO12_02085 PF02445 Quinolinate synthetase A protein DMO12_02100 PF00962 Adenosine/AMP deaminase DMO12_02103 PF00107 Zinc-binding dehydrogenase DMO12_02103 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_02106 PF03466 LysR substrate binding domain DMO12_02106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02109 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_02109 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_02109 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_02112 PF07690 Major Facilitator Superfamily DMO12_02115 PF02515 CoA-transferase family III DMO12_02121 PF00890 FAD binding domain DMO12_02121 PF14537 Cytochrome c3 DMO12_02124 PF03466 LysR substrate binding domain DMO12_02124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02130 PF07690 Major Facilitator Superfamily DMO12_02133 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02133 PF03466 LysR substrate binding domain DMO12_02139 PF07687 Peptidase dimerisation domain DMO12_02139 PF01546 Peptidase family M20/M25/M40 DMO12_02142 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DMO12_02142 PF12833 Helix-turn-helix domain DMO12_02148 PF01810 LysE type translocator DMO12_02151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02151 PF03466 LysR substrate binding domain DMO12_02157 PF08267 Cobalamin-independent synthase, N-terminal domain DMO12_02157 PF01717 Cobalamin-independent synthase, Catalytic domain DMO12_02160 PF01613 Flavin reductase like domain DMO12_02175 PF02567 Phenazine biosynthesis-like protein DMO12_02181 PF00665 Integrase core domain DMO12_02181 PF13936 Helix-turn-helix domain DMO12_02190 PF01011 PQQ enzyme repeat DMO12_02190 PF13360 PQQ-like domain DMO12_02232 PF00672 HAMP domain DMO12_02232 PF00512 His Kinase A (phospho-acceptor) domain DMO12_02232 PF13756 Stimulus-sensing domain DMO12_02232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_02232 PF13755 Sensor N-terminal transmembrane domain DMO12_02235 PF00268 Ribonucleotide reductase, small chain DMO12_02241 PF00317 Ribonucleotide reductase, all-alpha domain DMO12_02241 PF02867 Ribonucleotide reductase, barrel domain DMO12_02241 PF03477 ATP cone domain DMO12_02244 PF00486 Transcriptional regulatory protein, C terminal DMO12_02244 PF00072 Response regulator receiver domain DMO12_02247 PF00672 HAMP domain DMO12_02247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_02247 PF00512 His Kinase A (phospho-acceptor) domain DMO12_02253 PF17151 Periplasmic sensor domain DMO12_02253 PF00990 Diguanylate cyclase, GGDEF domain DMO12_02256 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DMO12_02259 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMO12_02262 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMO12_02262 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMO12_02268 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMO12_02268 PF10531 SLBB domain DMO12_02268 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMO12_02271 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMO12_02271 PF00384 Molybdopterin oxidoreductase DMO12_02271 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMO12_02274 PF00146 NADH dehydrogenase DMO12_02277 PF12838 4Fe-4S dicluster domain DMO12_02280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DMO12_02283 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DMO12_02286 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMO12_02286 PF00361 Proton-conducting membrane transporter DMO12_02289 PF00361 Proton-conducting membrane transporter DMO12_02292 PF00361 Proton-conducting membrane transporter DMO12_02298 PF00313 'Cold-shock' DNA-binding domain DMO12_02301 PF03466 LysR substrate binding domain DMO12_02301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02304 PF00175 Oxidoreductase NAD-binding domain DMO12_02304 PF00970 Oxidoreductase FAD-binding domain DMO12_02313 PF05552 Conserved TM helix DMO12_02322 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_02325 PF13533 Biotin-lipoyl like DMO12_02340 PF09334 tRNA synthetases class I (M) DMO12_02340 PF01588 Putative tRNA binding domain DMO12_02346 PF10609 NUBPL iron-transfer P-loop NTPase DMO12_02349 PF01048 Phosphorylase superfamily DMO12_02358 PF00692 dUTPase DMO12_02376 PF01207 Dihydrouridine synthase (Dus) DMO12_02382 PF00448 SRP54-type protein, GTPase domain DMO12_02382 PF02978 Signal peptide binding domain DMO12_02382 PF02881 SRP54-type protein, helical bundle domain DMO12_02385 PF03309 Type III pantothenate kinase DMO12_02391 PF01925 Sulfite exporter TauE/SafE DMO12_02397 PF02463 RecF/RecN/SMC N terminal domain DMO12_02397 PF06470 SMC proteins Flexible Hinge Domain DMO12_02403 PF12826 Helix-hairpin-helix motif DMO12_02403 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DMO12_02403 PF03120 NAD-dependent DNA ligase OB-fold domain DMO12_02403 PF01653 NAD-dependent DNA ligase adenylation domain DMO12_02403 PF00533 BRCA1 C Terminus (BRCT) domain DMO12_02406 PF00210 Ferritin-like domain DMO12_02409 PF07690 Major Facilitator Superfamily DMO12_02412 PF00982 Glycosyltransferase family 20 DMO12_02415 PF02358 Trehalose-phosphatase DMO12_02418 PF12697 Alpha/beta hydrolase family DMO12_02418 PF08241 Methyltransferase domain DMO12_02421 PF04055 Radical SAM superfamily DMO12_02421 PF00202 Aminotransferase class-III DMO12_02421 PF06968 Biotin and Thiamin Synthesis associated domain DMO12_02424 PF00155 Aminotransferase class I and II DMO12_02433 PF00849 RNA pseudouridylate synthase DMO12_02433 PF01479 S4 domain DMO12_02436 PF04079 Segregation and condensation complex subunit ScpB DMO12_02439 PF02616 Segregation and condensation protein ScpA DMO12_02442 PF01300 Telomere recombination DMO12_02445 PF04315 Elongation factor P hydroxylase DMO12_02448 PF02620 Large ribosomal RNA subunit accumulation protein YceD DMO12_02451 PF01783 Ribosomal L32p protein family DMO12_02454 PF00698 Acyl transferase domain DMO12_02460 PF00550 Phosphopantetheine attachment site DMO12_02463 PF01476 LysM domain DMO12_02463 PF04972 BON domain DMO12_02466 PF03070 TENA/THI-4/PQQC family DMO12_02466 PF08543 Phosphomethylpyrimidine kinase DMO12_02466 PF02581 Thiamine monophosphate synthase DMO12_02472 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMO12_02481 PF02261 Aspartate decarboxylase DMO12_02484 PF01195 Peptidyl-tRNA hydrolase DMO12_02487 PF01386 Ribosomal L25p family DMO12_02490 PF14572 Phosphoribosyl synthetase-associated domain DMO12_02490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DMO12_02505 PF03550 Outer membrane lipoprotein LolB DMO12_02511 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DMO12_02511 PF01488 Shikimate / quinate 5-dehydrogenase DMO12_02511 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DMO12_02514 PF08275 DNA primase catalytic core, N-terminal domain DMO12_02514 PF08278 DNA primase DnaG DnaB-binding DMO12_02514 PF10410 DnaB-helicase binding domain of primase DMO12_02514 PF01807 CHC2 zinc finger DMO12_02517 PF13525 Outer membrane lipoprotein DMO12_02520 PF01479 S4 domain DMO12_02520 PF00849 RNA pseudouridylate synthase DMO12_02526 PF03358 NADPH-dependent FMN reductase DMO12_02529 PF01668 SmpB protein DMO12_02532 PF01467 Cytidylyltransferase-like DMO12_02535 PF00037 4Fe-4S binding domain DMO12_02544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02544 PF03466 LysR substrate binding domain DMO12_02547 PF00180 Isocitrate/isopropylmalate dehydrogenase DMO12_02550 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_02553 PF07859 alpha/beta hydrolase fold DMO12_02556 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMO12_02556 PF00355 Rieske [2Fe-2S] domain DMO12_02559 PF00171 Aldehyde dehydrogenase family DMO12_02562 PF00970 Oxidoreductase FAD-binding domain DMO12_02562 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_02562 PF00175 Oxidoreductase NAD-binding domain DMO12_02571 PF02540 NAD synthase DMO12_02571 PF00795 Carbon-nitrogen hydrolase DMO12_02577 PF02678 Pirin DMO12_02577 PF05726 Pirin C-terminal cupin domain DMO12_02583 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_02583 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_02589 PF00164 Ribosomal protein S12/S23 DMO12_02592 PF00177 Ribosomal protein S7p/S5e DMO12_02595 PF03764 Elongation factor G, domain IV DMO12_02595 PF03144 Elongation factor Tu domain 2 DMO12_02595 PF14492 Elongation Factor G, domain II DMO12_02595 PF00679 Elongation factor G C-terminus DMO12_02595 PF00009 Elongation factor Tu GTP binding domain DMO12_02598 PF00009 Elongation factor Tu GTP binding domain DMO12_02598 PF03144 Elongation factor Tu domain 2 DMO12_02598 PF03143 Elongation factor Tu C-terminal domain DMO12_02607 PF00583 Acetyltransferase (GNAT) family DMO12_02610 PF04377 Arginine-tRNA-protein transferase, C terminus DMO12_02610 PF04376 Arginine-tRNA-protein transferase, N terminus DMO12_02613 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DMO12_02616 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_02619 PF17854 FtsK alpha domain DMO12_02619 PF09397 Ftsk gamma domain DMO12_02619 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DMO12_02619 PF01580 FtsK/SpoIIIE family DMO12_02622 PF01810 LysE type translocator DMO12_02634 PF03776 Septum formation topological specificity factor MinE DMO12_02637 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMO12_02640 PF03775 Septum formation inhibitor MinC, C-terminal domain DMO12_02646 PF01553 Acyltransferase DMO12_02649 PF00691 OmpA family DMO12_02649 PF13488 Glycine zipper DMO12_02655 PF13361 UvrD-like helicase C-terminal domain DMO12_02655 PF00580 UvrD/REP helicase N-terminal domain DMO12_02658 PF00692 dUTPase DMO12_02661 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMO12_02661 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMO12_02661 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMO12_02661 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMO12_02664 PF00696 Amino acid kinase family DMO12_02670 PF13230 Glutamine amidotransferases class-II DMO12_02673 PF01814 Hemerythrin HHE cation binding domain DMO12_02679 PF03658 RnfH family Ubiquitin DMO12_02682 PF04355 SmpA / OmlA family DMO12_02685 PF01475 Ferric uptake regulator family DMO12_02688 PF00437 Type II/IV secretion system protein DMO12_02691 PF00437 Type II/IV secretion system protein DMO12_02694 PF01168 Alanine racemase, N-terminal domain DMO12_02700 PF12320 Type 5 capsule protein repressor C-terminal domain DMO12_02700 PF00149 Calcineurin-like phosphoesterase DMO12_02712 PF08338 Domain of unknown function (DUF1731) DMO12_02712 PF01370 NAD dependent epimerase/dehydratase family DMO12_02715 PF01266 FAD dependent oxidoreductase DMO12_02718 PF00490 Delta-aminolevulinic acid dehydratase DMO12_02721 PF03061 Thioesterase superfamily DMO12_02730 PF07690 Major Facilitator Superfamily DMO12_02754 PF00665 Integrase core domain DMO12_02754 PF13936 Helix-turn-helix domain DMO12_02760 PF00083 Sugar (and other) transporter DMO12_02763 PF00701 Dihydrodipicolinate synthetase family DMO12_02769 PF04542 Sigma-70 region 2 DMO12_02769 PF08281 Sigma-70, region 4 DMO12_02775 PF00593 TonB dependent receptor DMO12_02775 PF07715 TonB-dependent Receptor Plug Domain DMO12_02787 PF01126 Heme oxygenase DMO12_02802 PF13520 Amino acid permease DMO12_02805 PF02574 Homocysteine S-methyltransferase DMO12_02811 PF06039 Malate:quinone oxidoreductase (Mqo) DMO12_02814 PF05199 GMC oxidoreductase DMO12_02814 PF00732 GMC oxidoreductase DMO12_02817 PF00171 Aldehyde dehydrogenase family DMO12_02820 PF13977 BetI-type transcriptional repressor, C-terminal DMO12_02820 PF00440 Bacterial regulatory proteins, tetR family DMO12_02823 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_02826 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_02832 PF03061 Thioesterase superfamily DMO12_02838 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMO12_02838 PF07683 Cobalamin synthesis protein cobW C-terminal domain DMO12_02841 PF00375 Sodium:dicarboxylate symporter family DMO12_02844 PF07152 YaeQ protein DMO12_02847 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_02850 PF14883 Hypothetical glycosyl hydrolase family 13 DMO12_02850 PF01522 Polysaccharide deacetylase DMO12_02853 PF00535 Glycosyl transferase family 2 DMO12_02859 PF00378 Enoyl-CoA hydratase/isomerase DMO12_02868 PF01614 Bacterial transcriptional regulator DMO12_02868 PF09339 IclR helix-turn-helix domain DMO12_02871 PF00355 Rieske [2Fe-2S] domain DMO12_02877 PF00355 Rieske [2Fe-2S] domain DMO12_02883 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMO12_02886 PF14759 Reductase C-terminal DMO12_02886 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_02889 PF07690 Major Facilitator Superfamily DMO12_02895 PF12697 Alpha/beta hydrolase family DMO12_02901 PF01958 Domain of unknown function DUF108 DMO12_02901 PF03447 Homoserine dehydrogenase, NAD binding domain DMO12_02904 PF00171 Aldehyde dehydrogenase family DMO12_02907 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMO12_02907 PF00205 Thiamine pyrophosphate enzyme, central domain DMO12_02907 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMO12_02913 PF07690 Major Facilitator Superfamily DMO12_02919 PF01327 Polypeptide deformylase DMO12_02922 PF04960 Glutaminase DMO12_02925 PF12833 Helix-turn-helix domain DMO12_02925 PF02311 AraC-like ligand binding domain DMO12_02928 PF07690 Major Facilitator Superfamily DMO12_02931 PF01263 Aldose 1-epimerase DMO12_02937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_02937 PF03466 LysR substrate binding domain DMO12_02943 PF07690 Major Facilitator Superfamily DMO12_02946 PF00456 Transketolase, thiamine diphosphate binding domain DMO12_02949 PF02780 Transketolase, C-terminal domain DMO12_02949 PF02779 Transketolase, pyrimidine binding domain DMO12_02952 PF02574 Homocysteine S-methyltransferase DMO12_02952 PF00809 Pterin binding enzyme DMO12_02952 PF02965 Vitamin B12 dependent methionine synthase, activation domain DMO12_02952 PF02607 B12 binding domain DMO12_02952 PF02310 B12 binding domain DMO12_02955 PF01384 Phosphate transporter family DMO12_02958 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_02967 PF03781 Sulfatase-modifying factor enzyme 1 DMO12_02970 PF00884 Sulfatase DMO12_02976 PF01521 Iron-sulphur cluster biosynthesis DMO12_02976 PF01106 NifU-like domain DMO12_02979 PF07715 TonB-dependent Receptor Plug Domain DMO12_02979 PF00593 TonB dependent receptor DMO12_02985 PF00561 alpha/beta hydrolase fold DMO12_02988 PF00484 Carbonic anhydrase DMO12_02991 PF13472 GDSL-like Lipase/Acylhydrolase family DMO12_02994 PF00005 ABC transporter DMO12_03000 PF01694 Rhomboid family DMO12_03003 PF00912 Transglycosylase DMO12_03006 PF02503 Polyphosphate kinase middle domain DMO12_03006 PF13090 Polyphosphate kinase C-terminal domain 2 DMO12_03006 PF13089 Polyphosphate kinase N-terminal domain DMO12_03006 PF17941 Polyphosphate kinase C-terminal domain 1 DMO12_03012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_03012 PF03466 LysR substrate binding domain DMO12_03015 PF00561 alpha/beta hydrolase fold DMO12_03018 PF18113 Rubredoxin binding C-terminal domain DMO12_03018 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_03021 PF00301 Rubredoxin DMO12_03030 PF01336 OB-fold nucleic acid binding domain DMO12_03030 PF00152 tRNA synthetases class II (D, K and N) DMO12_03033 PF14052 Capsule assembly protein Wzi DMO12_03039 PF01507 Phosphoadenosine phosphosulfate reductase family DMO12_03042 PF00009 Elongation factor Tu GTP binding domain DMO12_03051 PF03600 Citrate transporter DMO12_03054 PF00571 CBS domain DMO12_03054 PF03471 Transporter associated domain DMO12_03054 PF01595 Cyclin M transmembrane N-terminal domain DMO12_03057 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_03057 PF03466 LysR substrate binding domain DMO12_03060 PF00463 Isocitrate lyase family DMO12_03069 PF01774 UreD urease accessory protein DMO12_03072 PF00547 Urease, gamma subunit DMO12_03075 PF00699 Urease beta subunit DMO12_03078 PF00449 Urease alpha-subunit, N-terminal domain DMO12_03078 PF01979 Amidohydrolase family DMO12_03081 PF02814 UreE urease accessory protein, N-terminal domain DMO12_03081 PF05194 UreE urease accessory protein, C-terminal domain DMO12_03084 PF01730 UreF DMO12_03087 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMO12_03096 PF00905 Penicillin binding protein transpeptidase domain DMO12_03096 PF03717 Penicillin-binding Protein dimerisation domain DMO12_03105 PF05191 Adenylate kinase, active site lid DMO12_03108 PF10576 Iron-sulfur binding domain of endonuclease III DMO12_03108 PF00730 HhH-GPD superfamily base excision DNA repair protein DMO12_03108 PF00633 Helix-hairpin-helix motif DMO12_03111 PF04060 Putative Fe-S cluster DMO12_03114 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DMO12_03114 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DMO12_03120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DMO12_03123 PF02590 Predicted SPOUT methyltransferase DMO12_03126 PF02190 ATP-dependent protease La (LON) substrate-binding domain DMO12_03126 PF05362 Lon protease (S16) C-terminal proteolytic domain DMO12_03126 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_03129 PF03895 YadA-like membrane anchor domain DMO12_03129 PF05662 Coiled stalk of trimeric autotransporter adhesin DMO12_03129 PF05658 Head domain of trimeric autotransporter adhesin DMO12_03129 PF13018 Extended Signal Peptide of Type V secretion system DMO12_03135 PF01812 5-formyltetrahydrofolate cyclo-ligase family DMO12_03360 PF08019 Phosphoethanolamine transferase EptA/EptB DMO12_03360 PF00884 Sulfatase DMO12_03381 PF05195 Aminopeptidase P, N-terminal domain DMO12_03381 PF00557 Metallopeptidase family M24 DMO12_03384 PF01494 FAD binding domain DMO12_03387 PF01494 FAD binding domain DMO12_03393 PF13411 MerR HTH family regulatory protein DMO12_03399 PF01810 LysE type translocator DMO12_03402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_03402 PF03466 LysR substrate binding domain DMO12_03408 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMO12_03411 PF02021 Uncharacterised protein family UPF0102 DMO12_03414 PF04972 BON domain DMO12_03420 PF09297 NADH pyrophosphatase zinc ribbon domain DMO12_03420 PF00293 NUDIX domain DMO12_03426 PF00929 Exonuclease DMO12_03429 PF01476 LysM domain DMO12_03429 PF01464 Transglycosylase SLT domain DMO12_03429 PF01476 LysM domain DMO12_03429 PF01464 Transglycosylase SLT domain DMO12_03432 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMO12_03435 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_03438 PF12911 N-terminal TM domain of oligopeptide transport permease C DMO12_03438 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_03441 PF00005 ABC transporter DMO12_03441 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMO12_03444 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_03444 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_03447 PF07715 TonB-dependent Receptor Plug Domain DMO12_03447 PF00593 TonB dependent receptor DMO12_03453 PF00929 Exonuclease DMO12_03456 PF01979 Amidohydrolase family DMO12_03459 PF00990 Diguanylate cyclase, GGDEF domain DMO12_03459 PF00360 Phytochrome region DMO12_03459 PF00563 EAL domain DMO12_03459 PF01590 GAF domain DMO12_03462 PF00764 Arginosuccinate synthase DMO12_03465 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_03465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_03477 PF05987 Bacterial protein of unknown function (DUF898) DMO12_03480 PF03180 NLPA lipoprotein DMO12_03489 PF04717 Type VI secretion system, phage-baseplate injector DMO12_03489 PF16671 Actin cross-linking domain DMO12_03492 PF05593 RHS Repeat DMO12_03492 PF03527 RHS protein DMO12_03516 PF00324 Amino acid permease DMO12_03519 PF01266 FAD dependent oxidoreductase DMO12_03522 PF00324 Amino acid permease DMO12_03528 PF07729 FCD domain DMO12_03528 PF00392 Bacterial regulatory proteins, gntR family DMO12_03534 PF00171 Aldehyde dehydrogenase family DMO12_03540 PF00202 Aminotransferase class-III DMO12_03543 PF04958 Arginine N-succinyltransferase beta subunit DMO12_03546 PF00324 Amino acid permease DMO12_03549 PF00171 Aldehyde dehydrogenase family DMO12_03552 PF13610 DDE domain DMO12_03558 PF17932 Tetracyclin repressor-like, C-terminal domain DMO12_03558 PF00440 Bacterial regulatory proteins, tetR family DMO12_03561 PF02678 Pirin DMO12_03561 PF17954 Quercetinase C-terminal cupin domain DMO12_03567 PF00106 short chain dehydrogenase DMO12_03570 PF00743 Flavin-binding monooxygenase-like DMO12_03576 PF00860 Permease family DMO12_03579 PF00962 Adenosine/AMP deaminase DMO12_03582 PF01292 Prokaryotic cytochrome b561 DMO12_03588 PF01351 Ribonuclease HII DMO12_03591 PF02599 Global regulator protein family DMO12_03594 PF00696 Amino acid kinase family DMO12_03594 PF13840 ACT domain DMO12_03594 PF01842 ACT domain DMO12_03597 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMO12_03597 PF02272 DHHA1 domain DMO12_03597 PF01411 tRNA synthetases class II (A) DMO12_03600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DMO12_03600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DMO12_03603 PF13393 Histidyl-tRNA synthetase DMO12_03606 PF00709 Adenylosuccinate synthetase DMO12_03615 PF00248 Aldo/keto reductase family DMO12_03618 PF13545 Crp-like helix-turn-helix domain DMO12_03618 PF00027 Cyclic nucleotide-binding domain DMO12_03621 PF02566 OsmC-like protein DMO12_03630 PF10431 C-terminal, D2-small domain, of ClpB protein DMO12_03630 PF02861 Clp amino terminal domain, pathogenicity island component DMO12_03630 PF17871 AAA lid domain DMO12_03630 PF07724 AAA domain (Cdc48 subfamily) DMO12_03630 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_03639 PF10672 S-adenosylmethionine-dependent methyltransferase DMO12_03639 PF01170 Putative RNA methylase family UPF0020 DMO12_03639 PF02926 THUMP domain DMO12_03645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMO12_03645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMO12_03648 PF01979 Amidohydrolase family DMO12_03651 PF13488 Glycine zipper DMO12_03651 PF00691 OmpA family DMO12_03657 PF00043 Glutathione S-transferase, C-terminal domain DMO12_03657 PF13417 Glutathione S-transferase, N-terminal domain DMO12_03660 PF02390 Putative methyltransferase DMO12_03666 PF02798 Glutathione S-transferase, N-terminal domain DMO12_03666 PF00043 Glutathione S-transferase, C-terminal domain DMO12_03672 PF13192 Thioredoxin domain DMO12_03672 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_03684 PF10417 C-terminal domain of 1-Cys peroxiredoxin DMO12_03684 PF00578 AhpC/TSA family DMO12_03687 PF11898 Domain of unknown function (DUF3418) DMO12_03687 PF00270 DEAD/DEAH box helicase DMO12_03687 PF04408 Helicase associated domain (HA2) DMO12_03687 PF00271 Helicase conserved C-terminal domain DMO12_03687 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DMO12_03690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DMO12_03690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DMO12_03696 PF07690 Major Facilitator Superfamily DMO12_03699 PF03594 Benzoate membrane transport protein DMO12_03702 PF00106 short chain dehydrogenase DMO12_03705 PF00970 Oxidoreductase FAD-binding domain DMO12_03705 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_03705 PF00175 Oxidoreductase NAD-binding domain DMO12_03708 PF00866 Ring hydroxylating beta subunit DMO12_03711 PF00355 Rieske [2Fe-2S] domain DMO12_03711 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMO12_03714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_03714 PF03466 LysR substrate binding domain DMO12_03717 PF00403 Heavy-metal-associated domain DMO12_03720 PF00403 Heavy-metal-associated domain DMO12_03723 PF00376 MerR family regulatory protein DMO12_03723 PF09278 MerR, DNA binding DMO12_03744 PF02601 Exonuclease VII, large subunit DMO12_03744 PF13742 OB-fold nucleic acid binding domain DMO12_03765 PF01810 LysE type translocator DMO12_03768 PF00313 'Cold-shock' DNA-binding domain DMO12_03774 PF03807 NADP oxidoreductase coenzyme F420-dependent DMO12_03774 PF14748 Pyrroline-5-carboxylate reductase dimerisation DMO12_03789 PF07690 Major Facilitator Superfamily DMO12_03792 PF01638 HxlR-like helix-turn-helix DMO12_03810 PF09190 DALR domain DMO12_03810 PF01406 tRNA synthetases class I (C) catalytic domain DMO12_03813 PF00571 CBS domain DMO12_03813 PF01380 SIS domain DMO12_03822 PF03968 OstA-like protein DMO12_03825 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMO12_03825 PF00005 ABC transporter DMO12_03828 PF02321 Outer membrane efflux protein DMO12_03831 PF00664 ABC transporter transmembrane region DMO12_03831 PF00005 ABC transporter DMO12_03831 PF03412 Peptidase C39 family DMO12_03837 PF01205 Uncharacterized protein family UPF0029 DMO12_03840 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_03846 PF01596 O-methyltransferase DMO12_03852 PF00037 4Fe-4S binding domain DMO12_03852 PF11953 Domain of unknown function (DUF3470) DMO12_03858 PF00488 MutS domain V DMO12_03858 PF05190 MutS family domain IV DMO12_03858 PF05188 MutS domain II DMO12_03858 PF01624 MutS domain I DMO12_03858 PF05192 MutS domain III DMO12_03870 PF00892 EamA-like transporter family DMO12_03873 PF00563 EAL domain DMO12_03873 PF00990 Diguanylate cyclase, GGDEF domain DMO12_03873 PF03707 Bacterial signalling protein N terminal repeat DMO12_03876 PF03279 Bacterial lipid A biosynthesis acyltransferase DMO12_03882 PF07690 Major Facilitator Superfamily DMO12_03894 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMO12_03894 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMO12_03903 PF13419 Haloacid dehalogenase-like hydrolase DMO12_03909 PF16671 Actin cross-linking domain DMO12_03909 PF04717 Type VI secretion system, phage-baseplate injector DMO12_03912 PF14220 Domain of unknown function (DUF4329) DMO12_03912 PF05593 RHS Repeat DMO12_03912 PF03527 RHS protein DMO12_03921 PF03466 LysR substrate binding domain DMO12_03921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_03924 PF01566 Natural resistance-associated macrophage protein DMO12_03927 PF03746 LamB/YcsF family DMO12_03930 PF07286 Protein of unknown function (DUF1445) DMO12_03936 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_03936 PF00289 Biotin carboxylase, N-terminal domain DMO12_03936 PF02785 Biotin carboxylase C-terminal domain DMO12_03936 PF00364 Biotin-requiring enzyme DMO12_03939 PF00654 Voltage gated chloride channel DMO12_03954 PF00440 Bacterial regulatory proteins, tetR family DMO12_03960 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_03960 PF00107 Zinc-binding dehydrogenase DMO12_03960 PF13823 Alcohol dehydrogenase GroES-associated DMO12_03969 PF00289 Biotin carboxylase, N-terminal domain DMO12_03969 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_03969 PF02785 Biotin carboxylase C-terminal domain DMO12_03972 PF02525 Flavodoxin-like fold DMO12_03975 PF01638 HxlR-like helix-turn-helix DMO12_03984 PF01402 Ribbon-helix-helix protein, copG family DMO12_03984 PF08753 NikR C terminal nickel binding domain DMO12_03987 PF01425 Amidase DMO12_03990 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMO12_03993 PF00005 ABC transporter DMO12_04035 PF01389 OmpA-like transmembrane domain DMO12_04035 PF00691 OmpA family DMO12_04041 PF10431 C-terminal, D2-small domain, of ClpB protein DMO12_04041 PF07724 AAA domain (Cdc48 subfamily) DMO12_04041 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_04041 PF17871 AAA lid domain DMO12_04059 PF03466 LysR substrate binding domain DMO12_04059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMO12_04068 PF07690 Major Facilitator Superfamily DMO12_04077 PF02677 Epoxyqueuosine reductase QueH DMO12_04083 PF00376 MerR family regulatory protein DMO12_04083 PF09278 MerR, DNA binding DMO12_04092 PF00701 Dihydrodipicolinate synthetase family DMO12_04098 PF00392 Bacterial regulatory proteins, gntR family DMO12_04101 PF05544 Proline racemase DMO12_04104 PF01266 FAD dependent oxidoreductase DMO12_04110 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_04110 PF04324 BFD-like [2Fe-2S] binding domain DMO12_04116 PF00083 Sugar (and other) transporter DMO12_04119 PF00171 Aldehyde dehydrogenase family DMO12_04122 PF13520 Amino acid permease DMO12_04125 PF03313 Serine dehydratase alpha chain DMO12_04125 PF03315 Serine dehydratase beta chain DMO12_04128 PF01575 MaoC like domain DMO12_04128 PF00171 Aldehyde dehydrogenase family DMO12_04131 PF05138 Phenylacetic acid catabolic protein DMO12_04134 PF06243 Phenylacetic acid degradation B DMO12_04137 PF05138 Phenylacetic acid catabolic protein DMO12_04140 PF01883 Iron-sulfur cluster assembly protein DMO12_04143 PF00175 Oxidoreductase NAD-binding domain DMO12_04143 PF00970 Oxidoreductase FAD-binding domain DMO12_04143 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_04146 PF00378 Enoyl-CoA hydratase/isomerase DMO12_04149 PF00378 Enoyl-CoA hydratase/isomerase DMO12_04152 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DMO12_04152 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMO12_04152 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMO12_04155 PF02803 Thiolase, C-terminal domain DMO12_04155 PF00108 Thiolase, N-terminal domain DMO12_04158 PF14535 AMP-binding enzyme C-terminal domain DMO12_04158 PF00501 AMP-binding enzyme DMO12_04161 PF08223 PaaX-like protein C-terminal domain DMO12_04161 PF07848 PaaX-like protein DMO12_04164 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_04167 PF03061 Thioesterase superfamily DMO12_04188 PF00199 Catalase DMO12_04191 PF01292 Prokaryotic cytochrome b561 DMO12_04203 PF12697 Alpha/beta hydrolase family DMO12_04206 PF01613 Flavin reductase like domain DMO12_04209 PF00296 Luciferase-like monooxygenase DMO12_04212 PF00171 Aldehyde dehydrogenase family DMO12_04215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMO12_04221 PF00171 Aldehyde dehydrogenase family DMO12_04224 PF02627 Carboxymuconolactone decarboxylase family DMO12_04227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04227 PF03466 LysR substrate binding domain DMO12_04230 PF02525 Flavodoxin-like fold DMO12_04233 PF01614 Bacterial transcriptional regulator DMO12_04233 PF09339 IclR helix-turn-helix domain DMO12_04236 PF01494 FAD binding domain DMO12_04239 PF07702 UTRA domain DMO12_04239 PF00392 Bacterial regulatory proteins, gntR family DMO12_04245 PF08402 TOBE domain DMO12_04245 PF00005 ABC transporter DMO12_04248 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04251 PF01266 FAD dependent oxidoreductase DMO12_04254 PF00266 Aminotransferase class-V DMO12_04257 PF13419 Haloacid dehalogenase-like hydrolase DMO12_04260 PF07690 Major Facilitator Superfamily DMO12_04263 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04263 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04263 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_04266 PF02515 CoA-transferase family III DMO12_04269 PF09339 IclR helix-turn-helix domain DMO12_04272 PF00378 Enoyl-CoA hydratase/isomerase DMO12_04275 PF03060 Nitronate monooxygenase DMO12_04278 PF07690 Major Facilitator Superfamily DMO12_04281 PF09339 IclR helix-turn-helix domain DMO12_04284 PF02803 Thiolase, C-terminal domain DMO12_04284 PF00108 Thiolase, N-terminal domain DMO12_04287 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMO12_04287 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMO12_04287 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DMO12_04293 PF00378 Enoyl-CoA hydratase/isomerase DMO12_04296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04296 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_04296 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04299 PF07690 Major Facilitator Superfamily DMO12_04302 PF01144 Coenzyme A transferase DMO12_04305 PF01144 Coenzyme A transferase DMO12_04311 PF07690 Major Facilitator Superfamily DMO12_04317 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMO12_04317 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_04317 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04317 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04326 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04326 PF03466 LysR substrate binding domain DMO12_04329 PF00682 HMGL-like DMO12_04332 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_04332 PF02785 Biotin carboxylase C-terminal domain DMO12_04332 PF00289 Biotin carboxylase, N-terminal domain DMO12_04332 PF00364 Biotin-requiring enzyme DMO12_04335 PF00378 Enoyl-CoA hydratase/isomerase DMO12_04338 PF01039 Carboxyl transferase domain DMO12_04341 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_04341 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04341 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04344 PF00440 Bacterial regulatory proteins, tetR family DMO12_04347 PF00501 AMP-binding enzyme DMO12_04347 PF13193 AMP-binding enzyme C-terminal domain DMO12_04359 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04359 PF03466 LysR substrate binding domain DMO12_04383 PF02464 Competence-damaged protein DMO12_04383 PF00994 Probable molybdopterin binding domain DMO12_04383 PF18146 Damage-inducible protein CinA KH domain DMO12_04389 PF00199 Catalase DMO12_04389 PF06628 Catalase-related immune-responsive DMO12_04389 PF18011 C-terminal domain found in long catalases DMO12_04404 PF00717 Peptidase S24-like DMO12_04410 PF13404 AsnC-type helix-turn-helix domain DMO12_04410 PF01037 Lrp/AsnC ligand binding domain DMO12_04416 PF00072 Response regulator receiver domain DMO12_04416 PF09308 LuxQ, periplasmic DMO12_04416 PF00512 His Kinase A (phospho-acceptor) domain DMO12_04416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_04419 PF00072 Response regulator receiver domain DMO12_04425 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04428 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04431 PF00005 ABC transporter DMO12_04434 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMO12_04437 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMO12_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04440 PF03466 LysR substrate binding domain DMO12_04443 PF01810 LysE type translocator DMO12_04446 PF00266 Aminotransferase class-V DMO12_04452 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_04455 PF00581 Rhodanese-like domain DMO12_04461 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04461 PF03466 LysR substrate binding domain DMO12_04464 PF02798 Glutathione S-transferase, N-terminal domain DMO12_04467 PF14834 Glutathione S-transferase, C-terminal domain DMO12_04467 PF02798 Glutathione S-transferase, N-terminal domain DMO12_04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04470 PF03466 LysR substrate binding domain DMO12_04473 PF03788 LrgA family DMO12_04476 PF04172 LrgB-like family DMO12_04479 PF00392 Bacterial regulatory proteins, gntR family DMO12_04479 PF00155 Aminotransferase class I and II DMO12_04488 PF07690 Major Facilitator Superfamily DMO12_04491 PF16957 Malonate decarboxylase, alpha subunit, transporter DMO12_04494 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DMO12_04497 PF06857 Malonate decarboxylase delta subunit (MdcD) DMO12_04500 PF01039 Carboxyl transferase domain DMO12_04506 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DMO12_04509 PF00698 Acyl transferase domain DMO12_04518 PF03466 LysR substrate binding domain DMO12_04518 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04521 PF00155 Aminotransferase class I and II DMO12_04521 PF00392 Bacterial regulatory proteins, gntR family DMO12_04527 PF02322 Cytochrome bd terminal oxidase subunit II DMO12_04530 PF01654 Cytochrome bd terminal oxidase subunit I DMO12_04536 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04536 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04536 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_04539 PF00296 Luciferase-like monooxygenase DMO12_04542 PF00083 Sugar (and other) transporter DMO12_04548 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMO12_04551 PF00005 ABC transporter DMO12_04554 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04557 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DMO12_04560 PF01177 Asp/Glu/Hydantoin racemase DMO12_04563 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMO12_04569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04569 PF03466 LysR substrate binding domain DMO12_04575 PF01979 Amidohydrolase family DMO12_04575 PF13382 Adenine deaminase C-terminal domain DMO12_04581 PF03960 ArsC family DMO12_04584 PF01022 Bacterial regulatory protein, arsR family DMO12_04587 PF01758 Sodium Bile acid symporter family DMO12_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04590 PF03466 LysR substrate binding domain DMO12_04599 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_04599 PF13192 Thioredoxin domain DMO12_04608 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_04611 PF00588 SpoU rRNA Methylase family DMO12_04614 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMO12_04614 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMO12_04614 PF02811 PHP domain DMO12_04614 PF01336 OB-fold nucleic acid binding domain DMO12_04614 PF14579 Helix-hairpin-helix motif DMO12_04617 PF00710 Asparaginase, N-terminal DMO12_04617 PF17763 Glutaminase/Asparaginase C-terminal domain DMO12_04620 PF00375 Sodium:dicarboxylate symporter family DMO12_04623 PF00155 Aminotransferase class I and II DMO12_04626 PF01641 SelR domain DMO12_04629 PF00255 Glutathione peroxidase DMO12_04632 PF12852 Cupin DMO12_04632 PF12833 Helix-turn-helix domain DMO12_04638 PF00155 Aminotransferase class I and II DMO12_04641 PF08335 GlnD PII-uridylyltransferase DMO12_04641 PF01909 Nucleotidyltransferase domain DMO12_04641 PF01966 HD domain DMO12_04644 PF02222 ATP-grasp domain DMO12_04650 PF05437 Branched-chain amino acid transport protein (AzlD) DMO12_04653 PF03591 AzlC protein DMO12_04668 PF06071 Protein of unknown function (DUF933) DMO12_04668 PF01926 50S ribosome-binding GTPase DMO12_04671 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04674 PF09383 NIL domain DMO12_04674 PF00005 ABC transporter DMO12_04677 PF03180 NLPA lipoprotein DMO12_04680 PF03180 NLPA lipoprotein DMO12_04683 PF00296 Luciferase-like monooxygenase DMO12_04689 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_04689 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DMO12_04698 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04701 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_04704 PF00005 ABC transporter DMO12_04710 PF01037 Lrp/AsnC ligand binding domain DMO12_04713 PF01709 Transcriptional regulator DMO12_04719 PF00440 Bacterial regulatory proteins, tetR family DMO12_04734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_04734 PF03466 LysR substrate binding domain DMO12_04740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMO12_04746 PF00892 EamA-like transporter family DMO12_04758 PF13954 PapC N-terminal domain DMO12_04758 PF00577 Outer membrane usher protein DMO12_04758 PF13953 PapC C-terminal domain DMO12_04761 PF02753 Pili assembly chaperone PapD, C-terminal domain DMO12_04761 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DMO12_04764 PF16970 Type-1 fimbrial protein, A DMO12_04773 PF06968 Biotin and Thiamin Synthesis associated domain DMO12_04773 PF04055 Radical SAM superfamily DMO12_04776 PF08331 Domain of unknown function (DUF1730) DMO12_04779 PF01256 Carbohydrate kinase DMO12_04779 PF03853 YjeF-related protein N-terminus DMO12_04782 PF02075 Crossover junction endodeoxyribonuclease RuvC DMO12_04791 PF00905 Penicillin binding protein transpeptidase domain DMO12_04803 PF02772 S-adenosylmethionine synthetase, central domain DMO12_04803 PF02773 S-adenosylmethionine synthetase, C-terminal domain DMO12_04803 PF00438 S-adenosylmethionine synthetase, N-terminal domain DMO12_04806 PF02779 Transketolase, pyrimidine binding domain DMO12_04806 PF00456 Transketolase, thiamine diphosphate binding domain DMO12_04806 PF02780 Transketolase, C-terminal domain DMO12_04812 PF04264 YceI-like domain DMO12_04818 PF09992 Phosphodiester glycosidase DMO12_04824 PF05958 tRNA (Uracil-5-)-methyltransferase DMO12_04827 PF04229 GrpB protein DMO12_04830 PF00171 Aldehyde dehydrogenase family DMO12_04830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DMO12_04830 PF01619 Proline dehydrogenase DMO12_04830 PF14850 DNA-binding domain of Proline dehydrogenase DMO12_04833 PF01037 Lrp/AsnC ligand binding domain DMO12_04836 PF00474 Sodium:solute symporter family DMO12_04839 PF02146 Sir2 family DMO12_04842 PF01597 Glycine cleavage H-protein DMO12_04845 PF12833 Helix-turn-helix domain DMO12_04845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DMO12_04851 PF00005 ABC transporter DMO12_04851 PF00664 ABC transporter transmembrane region DMO12_04854 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DMO12_04857 PF06912 Protein of unknown function (DUF1275) DMO12_04860 PF00375 Sodium:dicarboxylate symporter family DMO12_04869 PF08007 Cupin superfamily protein DMO12_04872 PF02545 Maf-like protein DMO12_04878 PF00162 Phosphoglycerate kinase DMO12_04884 PF01116 Fructose-bisphosphate aldolase class-II DMO12_04887 PF00639 PPIC-type PPIASE domain DMO12_04887 PF09312 SurA N-terminal domain DMO12_04890 PF03968 OstA-like protein DMO12_04890 PF04453 LPS transport system D DMO12_04893 PF01636 Phosphotransferase enzyme family DMO12_04896 PF00483 Nucleotidyl transferase DMO12_04899 PF02527 rRNA small subunit methyltransferase G DMO12_04902 PF13614 AAA domain DMO12_04905 PF17762 HTH domain found in ParB protein DMO12_04905 PF02195 ParB-like nuclease domain DMO12_04908 PF01618 MotA/TolQ/ExbB proton channel family DMO12_04914 PF00005 ABC transporter DMO12_04914 PF00664 ABC transporter transmembrane region DMO12_04917 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DMO12_04920 PF02348 Cytidylyltransferase DMO12_04923 PF09115 DNA polymerase III, delta subunit, C terminal DMO12_04929 PF01026 TatD related DNase DMO12_04938 PF02501 Type II secretion system (T2SS), protein I DMO12_04938 PF07963 Prokaryotic N-terminal methylation motif DMO12_04941 PF11612 Type II secretion system (T2SS), protein J DMO12_04941 PF07963 Prokaryotic N-terminal methylation motif DMO12_04944 PF03934 Type II secretion system (T2SS), protein K DMO12_04950 PF03167 Uracil DNA glycosylase superfamily DMO12_04956 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMO12_04962 PF02224 Cytidylate kinase DMO12_04965 PF00575 S1 RNA binding domain DMO12_04968 PF00216 Bacterial DNA-binding protein DMO12_04974 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DMO12_04980 PF00743 Flavin-binding monooxygenase-like DMO12_04986 PF03969 AFG1-like ATPase DMO12_04989 PF01274 Malate synthase DMO12_04995 PF02472 Biopolymer transport protein ExbD/TolR DMO12_04998 PF02472 Biopolymer transport protein ExbD/TolR DMO12_05001 PF01618 MotA/TolQ/ExbB proton channel family DMO12_05007 PF07715 TonB-dependent Receptor Plug Domain DMO12_05007 PF00593 TonB dependent receptor DMO12_05019 PF01432 Peptidase family M3 DMO12_05022 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_05025 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_05028 PF00005 ABC transporter DMO12_05028 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMO12_05037 PF00459 Inositol monophosphatase family DMO12_05043 PF01649 Ribosomal protein S20 DMO12_05046 PF13460 NAD(P)H-binding DMO12_05049 PF03737 Aldolase/RraA DMO12_05061 PF17757 UvrB interaction domain DMO12_05061 PF03461 TRCF domain DMO12_05061 PF00270 DEAD/DEAH box helicase DMO12_05061 PF00271 Helicase conserved C-terminal domain DMO12_05061 PF02559 CarD-like/TRCF domain DMO12_05067 PF00211 Adenylate and Guanylate cyclase catalytic domain DMO12_05073 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_05076 PF00012 Hsp70 protein DMO12_05079 PF00226 DnaJ domain DMO12_05079 PF07743 HSCB C-terminal oligomerisation domain DMO12_05082 PF01521 Iron-sulphur cluster biosynthesis DMO12_05085 PF01592 NifU-like N terminal domain DMO12_05088 PF00266 Aminotransferase class-V DMO12_05091 PF02082 Transcriptional regulator DMO12_05100 PF00216 Bacterial DNA-binding protein DMO12_05103 PF00639 PPIC-type PPIASE domain DMO12_05103 PF09312 SurA N-terminal domain DMO12_05106 PF12852 Cupin DMO12_05106 PF12833 Helix-turn-helix domain DMO12_05109 PF00487 Fatty acid desaturase DMO12_05112 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_05112 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_05112 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_05115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_05115 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_05115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_05118 PF03109 ABC1 family DMO12_05124 PF04073 Aminoacyl-tRNA editing domain DMO12_05127 PF06276 Ferric iron reductase FhuF-like transporter DMO12_05127 PF04183 IucA / IucC family DMO12_05130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DMO12_05133 PF07690 Major Facilitator Superfamily DMO12_05136 PF06276 Ferric iron reductase FhuF-like transporter DMO12_05136 PF04183 IucA / IucC family DMO12_05139 PF04183 IucA / IucC family DMO12_05139 PF06276 Ferric iron reductase FhuF-like transporter DMO12_05148 PF00593 TonB dependent receptor DMO12_05148 PF07715 TonB-dependent Receptor Plug Domain DMO12_05163 PF13419 Haloacid dehalogenase-like hydrolase DMO12_05169 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DMO12_05172 PF02277 Phosphoribosyltransferase DMO12_05181 PF02654 Cobalamin-5-phosphate synthase DMO12_05184 PF00793 DAHP synthetase I family DMO12_05187 PF01925 Sulfite exporter TauE/SafE DMO12_05199 PF07715 TonB-dependent Receptor Plug Domain DMO12_05199 PF00593 TonB dependent receptor DMO12_05202 PF02684 Lipid-A-disaccharide synthetase DMO12_05208 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_05211 PF00005 ABC transporter DMO12_05232 PF01230 HIT domain DMO12_05250 PF08241 Methyltransferase domain DMO12_05253 PF00561 alpha/beta hydrolase fold DMO12_05256 PF01053 Cys/Met metabolism PLP-dependent enzyme DMO12_05262 PF02575 YbaB/EbfC DNA-binding family DMO12_05265 PF02132 RecR protein DMO12_05265 PF13662 Toprim domain DMO12_05268 PF01612 3'-5' exonuclease DMO12_05268 PF00570 HRDC domain DMO12_05280 PF05166 YcgL domain DMO12_05286 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_05286 PF17862 AAA+ lid domain DMO12_05286 PF01434 Peptidase family M41 DMO12_05292 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_05295 PF05175 Methyltransferase small domain DMO12_05298 PF01264 Chorismate synthase DMO12_05301 PF00990 Diguanylate cyclase, GGDEF domain DMO12_05301 PF08448 PAS fold DMO12_05310 PF04055 Radical SAM superfamily DMO12_05313 PF00676 Dehydrogenase E1 component DMO12_05316 PF02779 Transketolase, pyrimidine binding domain DMO12_05316 PF02780 Transketolase, C-terminal domain DMO12_05319 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DMO12_05319 PF00364 Biotin-requiring enzyme DMO12_05319 PF02817 e3 binding domain DMO12_05322 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_05322 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMO12_05325 PF00106 short chain dehydrogenase DMO12_05328 PF00107 Zinc-binding dehydrogenase DMO12_05328 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_05331 PF01062 Bestrophin, RFP-TM, chloride channel DMO12_05334 PF00158 Sigma-54 interaction domain DMO12_05334 PF00072 Response regulator receiver domain DMO12_05334 PF02954 Bacterial regulatory protein, Fis family DMO12_05337 PF04273 Putative phosphatase (DUF442) DMO12_05337 PF00753 Metallo-beta-lactamase superfamily DMO12_05340 PF04273 Putative phosphatase (DUF442) DMO12_05340 PF00753 Metallo-beta-lactamase superfamily DMO12_05343 PF01925 Sulfite exporter TauE/SafE DMO12_05352 PF12833 Helix-turn-helix domain DMO12_05352 PF06445 GyrI-like small molecule binding domain DMO12_05355 PF01638 HxlR-like helix-turn-helix DMO12_05358 PF02525 Flavodoxin-like fold DMO12_05373 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMO12_05376 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_05379 PF00005 ABC transporter DMO12_05388 PF00083 Sugar (and other) transporter DMO12_05391 PF07715 TonB-dependent Receptor Plug Domain DMO12_05391 PF00593 TonB dependent receptor DMO12_05394 PF10415 Fumarase C C-terminus DMO12_05394 PF00206 Lyase DMO12_05403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05403 PF03466 LysR substrate binding domain DMO12_05406 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05406 PF03466 LysR substrate binding domain DMO12_05409 PF02803 Thiolase, C-terminal domain DMO12_05409 PF00108 Thiolase, N-terminal domain DMO12_05412 PF02667 Short chain fatty acid transporter DMO12_05415 PF01144 Coenzyme A transferase DMO12_05418 PF01144 Coenzyme A transferase DMO12_05421 PF03466 LysR substrate binding domain DMO12_05421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05433 PF12833 Helix-turn-helix domain DMO12_05433 PF06719 AraC-type transcriptional regulator N-terminus DMO12_05436 PF07690 Major Facilitator Superfamily DMO12_05439 PF01738 Dienelactone hydrolase family DMO12_05448 PF01613 Flavin reductase like domain DMO12_05454 PF14525 AraC-binding-like domain DMO12_05454 PF12833 Helix-turn-helix domain DMO12_05457 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_05457 PF00175 Oxidoreductase NAD-binding domain DMO12_05457 PF00970 Oxidoreductase FAD-binding domain DMO12_05460 PF00866 Ring hydroxylating beta subunit DMO12_05463 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMO12_05463 PF00355 Rieske [2Fe-2S] domain DMO12_05466 PF03459 TOBE domain DMO12_05466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05472 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_05475 PF03459 TOBE domain DMO12_05475 PF00005 ABC transporter DMO12_05478 PF00106 short chain dehydrogenase DMO12_05481 PF00550 Phosphopantetheine attachment site DMO12_05481 PF00857 Isochorismatase family DMO12_05487 PF00149 Calcineurin-like phosphoesterase DMO12_05490 PF17941 Polyphosphate kinase C-terminal domain 1 DMO12_05490 PF13089 Polyphosphate kinase N-terminal domain DMO12_05490 PF02503 Polyphosphate kinase middle domain DMO12_05490 PF13090 Polyphosphate kinase C-terminal domain 2 DMO12_05493 PF12706 Beta-lactamase superfamily domain DMO12_05496 PF03070 TENA/THI-4/PQQC family DMO12_05499 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DMO12_05502 PF13186 Iron-sulfur cluster-binding domain DMO12_05502 PF04055 Radical SAM superfamily DMO12_05505 PF01244 Membrane dipeptidase (Peptidase family M19) DMO12_05517 PF13091 PLD-like domain DMO12_05526 PF00199 Catalase DMO12_05532 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_05532 PF00107 Zinc-binding dehydrogenase DMO12_05538 PF00419 Fimbrial protein DMO12_05541 PF13953 PapC C-terminal domain DMO12_05541 PF00577 Outer membrane usher protein DMO12_05541 PF13954 PapC N-terminal domain DMO12_05544 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DMO12_05544 PF02753 Pili assembly chaperone PapD, C-terminal domain DMO12_05547 PF16970 Type-1 fimbrial protein, A DMO12_05559 PF01266 FAD dependent oxidoreductase DMO12_05568 PF01593 Flavin containing amine oxidoreductase DMO12_05571 PF00743 Flavin-binding monooxygenase-like DMO12_05574 PF12146 Serine aminopeptidase, S33 DMO12_05577 PF02321 Outer membrane efflux protein DMO12_05580 PF00873 AcrB/AcrD/AcrF family DMO12_05583 PF00529 HlyD membrane-fusion protein of T1SS DMO12_05583 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_05586 PF00486 Transcriptional regulatory protein, C terminal DMO12_05586 PF00072 Response regulator receiver domain DMO12_05589 PF00512 His Kinase A (phospho-acceptor) domain DMO12_05589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_05589 PF00672 HAMP domain DMO12_05589 PF16527 Two-component sensor protein CpxA, periplasmic domain DMO12_05595 PF12833 Helix-turn-helix domain DMO12_05595 PF02311 AraC-like ligand binding domain DMO12_05598 PF12146 Serine aminopeptidase, S33 DMO12_05631 PF13291 ACT domain DMO12_05631 PF02824 TGS domain DMO12_05631 PF04607 Region found in RelA / SpoT proteins DMO12_05637 PF01975 Survival protein SurE DMO12_05652 PF07690 Major Facilitator Superfamily DMO12_05655 PF13533 Biotin-lipoyl like DMO12_05658 PF01425 Amidase DMO12_05661 PF00196 Bacterial regulatory proteins, luxR family DMO12_05706 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DMO12_05709 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DMO12_05709 PF14572 Phosphoribosyl synthetase-associated domain DMO12_05721 PF00005 ABC transporter DMO12_05730 PF00107 Zinc-binding dehydrogenase DMO12_05730 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_05739 PF12833 Helix-turn-helix domain DMO12_05739 PF06719 AraC-type transcriptional regulator N-terminus DMO12_05742 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMO12_05742 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMO12_05745 PF07690 Major Facilitator Superfamily DMO12_05748 PF01370 NAD dependent epimerase/dehydratase family DMO12_05751 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05751 PF03466 LysR substrate binding domain DMO12_05757 PF00920 Dehydratase family DMO12_05760 PF00171 Aldehyde dehydrogenase family DMO12_05769 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_05769 PF00529 HlyD membrane-fusion protein of T1SS DMO12_05781 PF03737 Aldolase/RraA DMO12_05784 PF01842 ACT domain DMO12_05784 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMO12_05784 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMO12_05787 PF07690 Major Facilitator Superfamily DMO12_05799 PF03466 LysR substrate binding domain DMO12_05799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05805 PF08450 SMP-30/Gluconolactonase/LRE-like region DMO12_05814 PF04909 Amidohydrolase DMO12_05817 PF07690 Major Facilitator Superfamily DMO12_05826 PF13332 Hemagglutinin repeat DMO12_05826 PF05860 haemagglutination activity domain DMO12_05826 PF04829 Pre-toxin domain with VENN motif DMO12_05826 PF13018 Extended Signal Peptide of Type V secretion system DMO12_05829 PF08479 POTRA domain, ShlB-type DMO12_05829 PF17287 POTRA domain DMO12_05829 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DMO12_05835 PF07687 Peptidase dimerisation domain DMO12_05835 PF01546 Peptidase family M20/M25/M40 DMO12_05841 PF00999 Sodium/hydrogen exchanger family DMO12_05841 PF02254 TrkA-N domain DMO12_05844 PF07995 Glucose / Sorbosone dehydrogenase DMO12_05847 PF03466 LysR substrate binding domain DMO12_05847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05850 PF00857 Isochorismatase family DMO12_05856 PF08359 YsiA-like protein, C-terminal region DMO12_05856 PF00440 Bacterial regulatory proteins, tetR family DMO12_05859 PF12706 Beta-lactamase superfamily domain DMO12_05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_05871 PF00376 MerR family regulatory protein DMO12_05871 PF09278 MerR, DNA binding DMO12_05874 PF01872 RibD C-terminal domain DMO12_05877 PF00106 short chain dehydrogenase DMO12_05880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_05880 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_05883 PF01047 MarR family DMO12_05886 PF07859 alpha/beta hydrolase fold DMO12_05895 PF00199 Catalase DMO12_05895 PF06628 Catalase-related immune-responsive DMO12_05898 PF00561 alpha/beta hydrolase fold DMO12_05904 PF00171 Aldehyde dehydrogenase family DMO12_05907 PF00107 Zinc-binding dehydrogenase DMO12_05907 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_05910 PF00474 Sodium:solute symporter family DMO12_05913 PF04341 Protein of unknown function, DUF485 DMO12_05916 PF13193 AMP-binding enzyme C-terminal domain DMO12_05916 PF00501 AMP-binding enzyme DMO12_05919 PF02954 Bacterial regulatory protein, Fis family DMO12_05919 PF06506 Propionate catabolism activator DMO12_05919 PF00158 Sigma-54 interaction domain DMO12_05925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_05925 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_05937 PF00171 Aldehyde dehydrogenase family DMO12_05943 PF07690 Major Facilitator Superfamily DMO12_05946 PF00920 Dehydratase family DMO12_05949 PF07729 FCD domain DMO12_05949 PF00392 Bacterial regulatory proteins, gntR family DMO12_05955 PF03466 LysR substrate binding domain DMO12_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_05958 PF13378 Enolase C-terminal domain-like DMO12_05958 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DMO12_05961 PF02426 Muconolactone delta-isomerase DMO12_05964 PF04444 Catechol dioxygenase N terminus DMO12_05964 PF00775 Dioxygenase DMO12_05967 PF01144 Coenzyme A transferase DMO12_05970 PF01144 Coenzyme A transferase DMO12_05973 PF02803 Thiolase, C-terminal domain DMO12_05973 PF00108 Thiolase, N-terminal domain DMO12_05976 PF12146 Serine aminopeptidase, S33 DMO12_05979 PF01804 Penicillin amidase DMO12_05982 PF00171 Aldehyde dehydrogenase family DMO12_05988 PF02727 Copper amine oxidase, N2 domain DMO12_05988 PF02728 Copper amine oxidase, N3 domain DMO12_05988 PF07833 Copper amine oxidase N-terminal domain DMO12_05988 PF01179 Copper amine oxidase, enzyme domain DMO12_05991 PF02311 AraC-like ligand binding domain DMO12_05991 PF12833 Helix-turn-helix domain DMO12_05994 PF01613 Flavin reductase like domain DMO12_05997 PF00175 Oxidoreductase NAD-binding domain DMO12_05997 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_06006 PF00355 Rieske [2Fe-2S] domain DMO12_06006 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMO12_06015 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DMO12_06018 PF01425 Amidase DMO12_06024 PF07690 Major Facilitator Superfamily DMO12_06030 PF00106 short chain dehydrogenase DMO12_06039 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_06039 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_06039 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_06042 PF03466 LysR substrate binding domain DMO12_06042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_06045 PF01614 Bacterial transcriptional regulator DMO12_06045 PF09339 IclR helix-turn-helix domain DMO12_06048 PF00753 Metallo-beta-lactamase superfamily DMO12_06054 PF04143 Sulphur transport DMO12_06060 PF01011 PQQ enzyme repeat DMO12_06060 PF13360 PQQ-like domain DMO12_06063 PF04966 Carbohydrate-selective porin, OprB family DMO12_06066 PF05048 Periplasmic copper-binding protein (NosD) DMO12_06069 PF01487 Type I 3-dehydroquinase DMO12_06072 PF00775 Dioxygenase DMO12_06075 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DMO12_06075 PF00775 Dioxygenase DMO12_06078 PF02627 Carboxymuconolactone decarboxylase family DMO12_06081 PF07690 Major Facilitator Superfamily DMO12_06084 PF00561 alpha/beta hydrolase fold DMO12_06087 PF10397 Adenylosuccinate lyase C-terminus DMO12_06087 PF00206 Lyase DMO12_06090 PF00108 Thiolase, N-terminal domain DMO12_06090 PF02803 Thiolase, C-terminal domain DMO12_06093 PF01144 Coenzyme A transferase DMO12_06096 PF01144 Coenzyme A transferase DMO12_06099 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DMO12_06102 PF04977 Septum formation initiator DMO12_06105 PF04239 Protein of unknown function (DUF421) DMO12_06108 PF00113 Enolase, C-terminal TIM barrel domain DMO12_06108 PF03952 Enolase, N-terminal domain DMO12_06111 PF00793 DAHP synthetase I family DMO12_06114 PF06418 CTP synthase N-terminus DMO12_06114 PF00117 Glutamine amidotransferase class-I DMO12_06132 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_06132 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_06141 PF00793 DAHP synthetase I family DMO12_06144 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DMO12_06147 PF10431 C-terminal, D2-small domain, of ClpB protein DMO12_06147 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_06147 PF07724 AAA domain (Cdc48 subfamily) DMO12_06147 PF02861 Clp amino terminal domain, pathogenicity island component DMO12_06147 PF17871 AAA lid domain DMO12_06150 PF02617 ATP-dependent Clp protease adaptor protein ClpS DMO12_06156 PF02774 Semialdehyde dehydrogenase, dimerisation domain DMO12_06156 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMO12_06165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DMO12_06168 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_06168 PF00585 C-terminal regulatory domain of Threonine dehydratase DMO12_06171 PF02254 TrkA-N domain DMO12_06171 PF02080 TrkA-C domain DMO12_06174 PF02386 Cation transport protein DMO12_06177 PF02253 Phospholipase A1 DMO12_06180 PF05193 Peptidase M16 inactive domain DMO12_06180 PF00675 Insulinase (Peptidase family M16) DMO12_06180 PF08367 Peptidase M16C associated DMO12_06183 PF07715 TonB-dependent Receptor Plug Domain DMO12_06183 PF00593 TonB dependent receptor DMO12_06186 PF00294 pfkB family carbohydrate kinase DMO12_06192 PF07290 Protein of unknown function (DUF1449) DMO12_06204 PF01654 Cytochrome bd terminal oxidase subunit I DMO12_06207 PF02322 Cytochrome bd terminal oxidase subunit II DMO12_06210 PF08173 Membrane bound YbgT-like protein DMO12_06219 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DMO12_06225 PF00448 SRP54-type protein, GTPase domain DMO12_06225 PF02881 SRP54-type protein, helical bundle domain DMO12_06240 PF00571 CBS domain DMO12_06240 PF00478 IMP dehydrogenase / GMP reductase domain DMO12_06243 PF00202 Aminotransferase class-III DMO12_06246 PF00462 Glutaredoxin DMO12_06252 PF03466 LysR substrate binding domain DMO12_06252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_06255 PF00557 Metallopeptidase family M24 DMO12_06258 PF05525 Branched-chain amino acid transport protein DMO12_06273 PF02896 PEP-utilising enzyme, TIM barrel domain DMO12_06273 PF00391 PEP-utilising enzyme, mobile domain DMO12_06273 PF05524 PEP-utilising enzyme, N-terminal DMO12_06273 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DMO12_06273 PF00381 PTS HPr component phosphorylation site DMO12_06276 PF00294 pfkB family carbohydrate kinase DMO12_06279 PF02378 Phosphotransferase system, EIIC DMO12_06279 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DMO12_06294 PF00563 EAL domain DMO12_06294 PF03707 Bacterial signalling protein N terminal repeat DMO12_06294 PF00990 Diguanylate cyclase, GGDEF domain DMO12_06300 PF07995 Glucose / Sorbosone dehydrogenase DMO12_06303 PF02586 SOS response associated peptidase (SRAP) DMO12_06306 PF00916 Sulfate permease family DMO12_06306 PF01740 STAS domain DMO12_06309 PF05922 Peptidase inhibitor I9 DMO12_06309 PF00082 Subtilase family DMO12_06315 PF13936 Helix-turn-helix domain DMO12_06315 PF00665 Integrase core domain DMO12_06318 PF00324 Amino acid permease DMO12_06321 PF00266 Aminotransferase class-V DMO12_06324 PF01037 Lrp/AsnC ligand binding domain DMO12_06339 PF13419 Haloacid dehalogenase-like hydrolase DMO12_06342 PF01479 S4 domain DMO12_06345 PF00154 recA bacterial DNA recombination protein DMO12_06348 PF02631 RecX family DMO12_06354 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DMO12_06354 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_06357 PF07977 FabA-like domain DMO12_06360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DMO12_06360 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_06366 PF07244 Surface antigen variable number repeat DMO12_06366 PF01103 Surface antigen DMO12_06369 PF17820 PDZ domain DMO12_06369 PF02163 Peptidase family M50 DMO12_06369 PF13180 PDZ domain DMO12_06372 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DMO12_06372 PF13288 DXP reductoisomerase C-terminal domain DMO12_06372 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DMO12_06378 PF01255 Putative undecaprenyl diphosphate synthase DMO12_06381 PF01765 Ribosome recycling factor DMO12_06384 PF00696 Amino acid kinase family DMO12_06387 PF18693 TRAM domain DMO12_06387 PF00919 Uncharacterized protein family UPF0004 DMO12_06387 PF04055 Radical SAM superfamily DMO12_06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_06390 PF00512 His Kinase A (phospho-acceptor) domain DMO12_06390 PF00989 PAS fold DMO12_06393 PF00158 Sigma-54 interaction domain DMO12_06393 PF02954 Bacterial regulatory protein, Fis family DMO12_06393 PF00072 Response regulator receiver domain DMO12_06396 PF00440 Bacterial regulatory proteins, tetR family DMO12_06399 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMO12_06399 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMO12_06405 PF02542 YgbB family DMO12_06411 PF01266 FAD dependent oxidoreductase DMO12_06423 PF00206 Lyase DMO12_06423 PF10415 Fumarase C C-terminus DMO12_06426 PF16363 GDP-mannose 4,6 dehydratase DMO12_06429 PF02635 DsrE/DsrF-like family DMO12_06441 PF00892 EamA-like transporter family DMO12_06444 PF00155 Aminotransferase class I and II DMO12_06444 PF00392 Bacterial regulatory proteins, gntR family DMO12_06447 PF01638 HxlR-like helix-turn-helix DMO12_06450 PF03453 MoeA N-terminal region (domain I and II) DMO12_06450 PF03454 MoeA C-terminal region (domain IV) DMO12_06450 PF00994 Probable molybdopterin binding domain DMO12_06453 PF00994 Probable molybdopterin binding domain DMO12_06453 PF01967 MoaC family DMO12_06456 PF02391 MoaE protein DMO12_06462 PF04055 Radical SAM superfamily DMO12_06462 PF06463 Molybdenum Cofactor Synthesis C DMO12_06465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMO12_06465 PF01568 Molydopterin dinucleotide binding domain DMO12_06465 PF00384 Molybdopterin oxidoreductase DMO12_06468 PF12804 MobA-like NTP transferase domain DMO12_06471 PF04324 BFD-like [2Fe-2S] binding domain DMO12_06471 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMO12_06471 PF00384 Molybdopterin oxidoreductase DMO12_06471 PF01568 Molydopterin dinucleotide binding domain DMO12_06474 PF18267 Rubredoxin NAD+ reductase C-terminal domain DMO12_06474 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_06474 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMO12_06474 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMO12_06474 PF04324 BFD-like [2Fe-2S] binding domain DMO12_06477 PF13806 Rieske-like [2Fe-2S] domain DMO12_06477 PF04324 BFD-like [2Fe-2S] binding domain DMO12_06477 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMO12_06477 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMO12_06477 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_06477 PF18267 Rubredoxin NAD+ reductase C-terminal domain DMO12_06483 PF00072 Response regulator receiver domain DMO12_06483 PF00486 Transcriptional regulatory protein, C terminal DMO12_06486 PF00005 ABC transporter DMO12_06489 PF11799 impB/mucB/samB family C-terminal domain DMO12_06489 PF00817 impB/mucB/samB family DMO12_06489 PF13438 Domain of unknown function (DUF4113) DMO12_06492 PF01220 Dehydroquinase class II DMO12_06495 PF00364 Biotin-requiring enzyme DMO12_06498 PF02785 Biotin carboxylase C-terminal domain DMO12_06498 PF00289 Biotin carboxylase, N-terminal domain DMO12_06498 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_06504 PF12832 MFS_1 like family DMO12_06567 PF00712 DNA polymerase III beta subunit, N-terminal domain DMO12_06567 PF02767 DNA polymerase III beta subunit, central domain DMO12_06567 PF02768 DNA polymerase III beta subunit, C-terminal domain DMO12_06591 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DMO12_06708 PF01695 IstB-like ATP binding protein DMO12_06714 PF00145 C-5 cytosine-specific DNA methylase DMO12_06759 PF00929 Exonuclease DMO12_06798 PF01645 Conserved region in glutamate synthase DMO12_06807 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DMO12_06807 PF01565 FAD binding domain DMO12_06810 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMO12_06816 PF00465 Iron-containing alcohol dehydrogenase DMO12_06819 PF03061 Thioesterase superfamily DMO12_06822 PF04185 Phosphoesterase family DMO12_06822 PF05506 Domain of unknown function (DUF756) DMO12_06828 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DMO12_06828 PF12170 DNA polymerase III tau subunit V interacting with alpha DMO12_06828 PF12169 DNA polymerase III subunits gamma and tau domain III DMO12_06831 PF07690 Major Facilitator Superfamily DMO12_06846 PF02803 Thiolase, C-terminal domain DMO12_06846 PF00108 Thiolase, N-terminal domain DMO12_06852 PF03466 LysR substrate binding domain DMO12_06852 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_06858 PF01810 LysE type translocator DMO12_06861 PF01037 Lrp/AsnC ligand binding domain DMO12_06864 PF03594 Benzoate membrane transport protein DMO12_06867 PF02308 MgtC family DMO12_06870 PF00690 Cation transporter/ATPase, N-terminus DMO12_06870 PF00689 Cation transporting ATPase, C-terminus DMO12_06885 PF00582 Universal stress protein family DMO12_06888 PF12848 ABC transporter DMO12_06888 PF00005 ABC transporter DMO12_06900 PF07715 TonB-dependent Receptor Plug Domain DMO12_06900 PF00593 TonB dependent receptor DMO12_06918 PF00924 Mechanosensitive ion channel DMO12_06921 PF00593 TonB dependent receptor DMO12_06921 PF07715 TonB-dependent Receptor Plug Domain DMO12_06924 PF00440 Bacterial regulatory proteins, tetR family DMO12_06930 PF01037 Lrp/AsnC ligand binding domain DMO12_06933 PF01817 Chorismate mutase type II DMO12_06939 PF00106 short chain dehydrogenase DMO12_06945 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DMO12_06945 PF01433 Peptidase family M1 domain DMO12_06945 PF11940 Domain of unknown function (DUF3458) Ig-like fold DMO12_06954 PF02110 Hydroxyethylthiazole kinase family DMO12_06957 PF06445 GyrI-like small molecule binding domain DMO12_06963 PF05970 PIF1-like helicase DMO12_06963 PF14493 Helix-turn-helix domain DMO12_06966 PF00465 Iron-containing alcohol dehydrogenase DMO12_06975 PF00171 Aldehyde dehydrogenase family DMO12_06978 PF13520 Amino acid permease DMO12_06981 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DMO12_06984 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DMO12_06987 PF02540 NAD synthase DMO12_06987 PF00117 Glutamine amidotransferase class-I DMO12_06987 PF00958 GMP synthase C terminal domain DMO12_06990 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DMO12_06990 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMO12_06993 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DMO12_06996 PF00149 Calcineurin-like phosphoesterase DMO12_07002 PF00881 Nitroreductase family DMO12_07008 PF17209 Hfq protein DMO12_07014 PF01119 DNA mismatch repair protein, C-terminal domain DMO12_07014 PF08676 MutL C terminal dimerisation domain DMO12_07017 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DMO12_07020 PF00849 RNA pseudouridylate synthase DMO12_07020 PF01479 S4 domain DMO12_07029 PF00849 RNA pseudouridylate synthase DMO12_07029 PF01479 S4 domain DMO12_07035 PF04284 Protein of unknown function (DUF441) DMO12_07038 PF03466 LysR substrate binding domain DMO12_07038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_07047 PF07690 Major Facilitator Superfamily DMO12_07050 PF00520 Ion transport protein DMO12_07050 PF00027 Cyclic nucleotide-binding domain DMO12_07056 PF00330 Aconitase family (aconitate hydratase) DMO12_07056 PF11791 Aconitate B N-terminal domain DMO12_07056 PF06434 Aconitate hydratase 2 N-terminus DMO12_07065 PF01103 Surface antigen DMO12_07065 PF07244 Surface antigen variable number repeat DMO12_07065 PF17243 POTRA domain TamA domain 1 DMO12_07068 PF07690 Major Facilitator Superfamily DMO12_07071 PF03232 Ubiquinone biosynthesis protein COQ7 DMO12_07077 PF00120 Glutamine synthetase, catalytic domain DMO12_07080 PF00486 Transcriptional regulatory protein, C terminal DMO12_07080 PF00072 Response regulator receiver domain DMO12_07083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_07083 PF02702 Osmosensitive K+ channel His kinase sensor domain DMO12_07083 PF00512 His Kinase A (phospho-acceptor) domain DMO12_07083 PF13493 Domain of unknown function (DUF4118) DMO12_07086 PF02669 K+-transporting ATPase, c chain DMO12_07092 PF03814 Potassium-transporting ATPase A subunit DMO12_07101 PF03109 ABC1 family DMO12_07104 PF00899 ThiF family DMO12_07107 PF01613 Flavin reductase like domain DMO12_07110 PF13193 AMP-binding enzyme C-terminal domain DMO12_07110 PF00501 AMP-binding enzyme DMO12_07113 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_07113 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_07113 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_07116 PF00106 short chain dehydrogenase DMO12_07119 PF12833 Helix-turn-helix domain DMO12_07122 PF09084 NMT1/THI5 like DMO12_07125 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_07128 PF17827 PrmC N-terminal domain DMO12_07128 PF13847 Methyltransferase domain DMO12_07131 PF03462 PCRF domain DMO12_07131 PF00472 RF-1 domain DMO12_07137 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_07137 PF03466 LysR substrate binding domain DMO12_07146 PF00296 Luciferase-like monooxygenase DMO12_07152 PF13994 PgaD-like protein DMO12_07155 PF00535 Glycosyl transferase family 2 DMO12_07158 PF01522 Polysaccharide deacetylase DMO12_07158 PF14883 Hypothetical glycosyl hydrolase family 13 DMO12_07167 PF03618 Kinase/pyrophosphorylase DMO12_07170 PF00391 PEP-utilising enzyme, mobile domain DMO12_07170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMO12_07170 PF02896 PEP-utilising enzyme, TIM barrel domain DMO12_07176 PF06481 COX Aromatic Rich Motif DMO12_07176 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DMO12_07179 PF00115 Cytochrome C and Quinol oxidase polypeptide I DMO12_07182 PF00510 Cytochrome c oxidase subunit III DMO12_07185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DMO12_07188 PF01040 UbiA prenyltransferase family DMO12_07191 PF01250 Ribosomal protein S6 DMO12_07194 PF01084 Ribosomal protein S18 DMO12_07197 PF01281 Ribosomal protein L9, N-terminal domain DMO12_07197 PF03948 Ribosomal protein L9, C-terminal domain DMO12_07200 PF03796 DnaB-like helicase C terminal domain DMO12_07200 PF00772 DnaB-like helicase N terminal domain DMO12_07203 PF00842 Alanine racemase, C-terminal domain DMO12_07203 PF01168 Alanine racemase, N-terminal domain DMO12_07209 PF01841 Transglutaminase-like superfamily DMO12_07209 PF08379 Bacterial transglutaminase-like N-terminal region DMO12_07215 PF14403 Circularly permuted ATP-grasp type 2 DMO12_07221 PF01134 Glucose inhibited division protein A DMO12_07221 PF13932 GidA associated domain DMO12_07233 PF02954 Bacterial regulatory protein, Fis family DMO12_07236 PF02142 MGS-like domain DMO12_07236 PF01808 AICARFT/IMPCHase bienzyme DMO12_07239 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DMO12_07239 PF02844 Phosphoribosylglycinamide synthetase, N domain DMO12_07239 PF02843 Phosphoribosylglycinamide synthetase, C domain DMO12_07242 PF03180 NLPA lipoprotein DMO12_07245 PF09383 NIL domain DMO12_07245 PF00005 ABC transporter DMO12_07248 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_07251 PF00753 Metallo-beta-lactamase superfamily DMO12_07251 PF16123 Hydroxyacylglutathione hydrolase C-terminus DMO12_07257 PF00375 Sodium:dicarboxylate symporter family DMO12_07269 PF07995 Glucose / Sorbosone dehydrogenase DMO12_07272 PF00892 EamA-like transporter family DMO12_07275 PF01177 Asp/Glu/Hydantoin racemase DMO12_07281 PF02470 MlaD protein DMO12_07284 PF04403 Paraquat-inducible protein A DMO12_07290 PF06826 Predicted Permease Membrane Region DMO12_07290 PF02080 TrkA-C domain DMO12_07293 PF00155 Aminotransferase class I and II DMO12_07302 PF00083 Sugar (and other) transporter DMO12_07302 PF08946 Osmosensory transporter coiled coil DMO12_07305 PF08946 Osmosensory transporter coiled coil DMO12_07305 PF00083 Sugar (and other) transporter DMO12_07326 PF13936 Helix-turn-helix domain DMO12_07326 PF00665 Integrase core domain DMO12_07338 PF00392 Bacterial regulatory proteins, gntR family DMO12_07338 PF07729 FCD domain DMO12_07344 PF03616 Sodium/glutamate symporter DMO12_07347 PF00561 alpha/beta hydrolase fold DMO12_07362 PF04076 Bacterial OB fold (BOF) protein DMO12_07380 PF00324 Amino acid permease DMO12_07383 PF00171 Aldehyde dehydrogenase family DMO12_07386 PF00202 Aminotransferase class-III DMO12_07389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_07389 PF03466 LysR substrate binding domain DMO12_07404 PF00069 Protein kinase domain DMO12_07416 PF00814 Glycoprotease family DMO12_07419 PF01165 Ribosomal protein S21 DMO12_07422 PF09424 Yqey-like protein DMO12_07425 PF01435 Peptidase family M48 DMO12_07428 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMO12_07428 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMO12_07437 PF00156 Phosphoribosyl transferase domain DMO12_07440 PF02674 Colicin V production protein DMO12_07443 PF01180 Dihydroorotate dehydrogenase DMO12_07455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DMO12_07455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DMO12_07458 PF00881 Nitroreductase family DMO12_07464 PF00271 Helicase conserved C-terminal domain DMO12_07464 PF00270 DEAD/DEAH box helicase DMO12_07467 PF00313 'Cold-shock' DNA-binding domain DMO12_07473 PF00140 Sigma-70 factor, region 1.2 DMO12_07473 PF04545 Sigma-70, region 4 DMO12_07473 PF04542 Sigma-70 region 2 DMO12_07476 PF04241 Protein of unknown function (DUF423) DMO12_07482 PF05690 Thiazole biosynthesis protein ThiG DMO12_07488 PF03883 Peroxide stress protein YaaA DMO12_07494 PF12706 Beta-lactamase superfamily domain DMO12_07497 PF01546 Peptidase family M20/M25/M40 DMO12_07497 PF07687 Peptidase dimerisation domain DMO12_07503 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DMO12_07506 PF01842 ACT domain DMO12_07506 PF01817 Chorismate mutase type II DMO12_07506 PF00800 Prephenate dehydratase DMO12_07509 PF00756 Putative esterase DMO12_07512 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_07512 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_07512 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_07515 PF00375 Sodium:dicarboxylate symporter family DMO12_07518 PF02885 Glycosyl transferase family, helical bundle domain DMO12_07518 PF00591 Glycosyl transferase family, a/b domain DMO12_07521 PF07023 Protein of unknown function (DUF1315) DMO12_07524 PF01513 ATP-NAD kinase DMO12_07527 PF00912 Transglycosylase DMO12_07527 PF14814 Bifunctional transglycosylase second domain DMO12_07527 PF00905 Penicillin binding protein transpeptidase domain DMO12_07533 PF00293 NUDIX domain DMO12_07539 PF00512 His Kinase A (phospho-acceptor) domain DMO12_07539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_07539 PF08521 Two-component sensor kinase N-terminal DMO12_07542 PF00072 Response regulator receiver domain DMO12_07542 PF00486 Transcriptional regulatory protein, C terminal DMO12_07548 PF00437 Type II/IV secretion system protein DMO12_07554 PF18389 TrmO C-terminal domain DMO12_07554 PF01980 tRNA-methyltransferase O DMO12_07557 PF00175 Oxidoreductase NAD-binding domain DMO12_07557 PF00970 Oxidoreductase FAD-binding domain DMO12_07560 PF02567 Phenazine biosynthesis-like protein DMO12_07563 PF00392 Bacterial regulatory proteins, gntR family DMO12_07563 PF00155 Aminotransferase class I and II DMO12_07569 PF00037 4Fe-4S binding domain DMO12_07572 PF00893 Small Multidrug Resistance protein DMO12_07575 PF00005 ABC transporter DMO12_07578 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_07581 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_07584 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMO12_07587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_07587 PF03466 LysR substrate binding domain DMO12_07590 PF13533 Biotin-lipoyl like DMO12_07593 PF00873 AcrB/AcrD/AcrF family DMO12_07596 PF02321 Outer membrane efflux protein DMO12_07599 PF00464 Serine hydroxymethyltransferase DMO12_07617 PF00005 ABC transporter DMO12_07620 PF01061 ABC-2 type transporter DMO12_07623 PF14489 QueF-like protein DMO12_07623 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DMO12_07629 PF01098 Cell cycle protein DMO12_07632 PF13406 Transglycosylase SLT domain DMO12_07635 PF03330 Lytic transglycolase DMO12_07635 PF05036 Sporulation related domain DMO12_07647 PF12833 Helix-turn-helix domain DMO12_07653 PF00889 Elongation factor TS DMO12_07656 PF00318 Ribosomal protein S2 DMO12_07659 PF00557 Metallopeptidase family M24 DMO12_07665 PF07690 Major Facilitator Superfamily DMO12_07674 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_07674 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMO12_07677 PF04055 Radical SAM superfamily DMO12_07680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_07680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_07680 PF09317 Domain of unknown function (DUF1974) DMO12_07689 PF05221 S-adenosyl-L-homocysteine hydrolase DMO12_07689 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DMO12_07692 PF02219 Methylenetetrahydrofolate reductase DMO12_07695 PF04452 RNA methyltransferase DMO12_07698 PF00563 EAL domain DMO12_07698 PF03707 Bacterial signalling protein N terminal repeat DMO12_07698 PF00990 Diguanylate cyclase, GGDEF domain DMO12_07701 PF03949 Malic enzyme, NAD binding domain DMO12_07701 PF01515 Phosphate acetyl/butaryl transferase DMO12_07701 PF00390 Malic enzyme, N-terminal domain DMO12_07704 PF01743 Poly A polymerase head domain DMO12_07704 PF12627 Probable RNA and SrmB- binding site of polymerase A DMO12_07707 PF13180 PDZ domain DMO12_07710 PF01784 NIF3 (NGG1p interacting factor 3) DMO12_07713 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DMO12_07713 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DMO12_07734 PF01040 UbiA prenyltransferase family DMO12_07737 PF04345 Chorismate lyase DMO12_07743 PF00854 POT family DMO12_07749 PF00117 Glutamine amidotransferase class-I DMO12_07752 PF01433 Peptidase family M1 domain DMO12_07752 PF11838 ERAP1-like C-terminal domain DMO12_07755 PF00593 TonB dependent receptor DMO12_07755 PF07715 TonB-dependent Receptor Plug Domain DMO12_07758 PF00591 Glycosyl transferase family, a/b domain DMO12_07758 PF02885 Glycosyl transferase family, helical bundle domain DMO12_07761 PF00218 Indole-3-glycerol phosphate synthase DMO12_07770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMO12_07770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMO12_07773 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_07773 PF01799 [2Fe-2S] binding domain DMO12_07779 PF00665 Integrase core domain DMO12_07779 PF13936 Helix-turn-helix domain DMO12_07782 PF00144 Beta-lactamase DMO12_07791 PF05675 Protein of unknown function (DUF817) DMO12_07794 PF01208 Uroporphyrinogen decarboxylase (URO-D) DMO12_07800 PF00425 chorismate binding enzyme DMO12_07806 PF00975 Thioesterase domain DMO12_07809 PF00005 ABC transporter DMO12_07809 PF00664 ABC transporter transmembrane region DMO12_07812 PF00005 ABC transporter DMO12_07812 PF00664 ABC transporter transmembrane region DMO12_07818 PF00282 Pyridoxal-dependent decarboxylase conserved domain DMO12_07821 PF00550 Phosphopantetheine attachment site DMO12_07821 PF00857 Isochorismatase family DMO12_07824 PF13193 AMP-binding enzyme C-terminal domain DMO12_07824 PF00501 AMP-binding enzyme DMO12_07827 PF00550 Phosphopantetheine attachment site DMO12_07827 PF00668 Condensation domain DMO12_07827 PF00501 AMP-binding enzyme DMO12_07830 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DMO12_07833 PF07715 TonB-dependent Receptor Plug Domain DMO12_07833 PF00593 TonB dependent receptor DMO12_07836 PF01497 Periplasmic binding protein DMO12_07839 PF00005 ABC transporter DMO12_07842 PF01032 FecCD transport family DMO12_07845 PF01032 FecCD transport family DMO12_07854 PF00550 Phosphopantetheine attachment site DMO12_07854 PF13193 AMP-binding enzyme C-terminal domain DMO12_07854 PF00668 Condensation domain DMO12_07854 PF00975 Thioesterase domain DMO12_07854 PF00501 AMP-binding enzyme DMO12_07857 PF00501 AMP-binding enzyme DMO12_07857 PF13193 AMP-binding enzyme C-terminal domain DMO12_07857 PF00668 Condensation domain DMO12_07857 PF00550 Phosphopantetheine attachment site DMO12_07863 PF08348 YheO-like PAS domain DMO12_07863 PF13309 HTH domain DMO12_07866 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_07869 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_07872 PF02678 Pirin DMO12_07872 PF17954 Quercetinase C-terminal cupin domain DMO12_07881 PF00440 Bacterial regulatory proteins, tetR family DMO12_07884 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_07884 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_07884 PF16197 Ketoacyl-synthetase C-terminal extension DMO12_07884 PF09277 Erythronolide synthase, docking DMO12_07884 PF00698 Acyl transferase domain DMO12_07884 PF08990 Erythronolide synthase docking DMO12_07884 PF14765 Polyketide synthase dehydratase DMO12_07884 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_07884 PF00550 Phosphopantetheine attachment site DMO12_07884 PF08659 KR domain DMO12_07887 PF13378 Enolase C-terminal domain-like DMO12_07887 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DMO12_07890 PF00083 Sugar (and other) transporter DMO12_07893 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DMO12_07899 PF00892 EamA-like transporter family DMO12_07911 PF01266 FAD dependent oxidoreductase DMO12_07911 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DMO12_07914 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_07914 PF18113 Rubredoxin binding C-terminal domain DMO12_07920 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMO12_07920 PF00355 Rieske [2Fe-2S] domain DMO12_07923 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_07926 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_07929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_07929 PF03466 LysR substrate binding domain DMO12_07932 PF00324 Amino acid permease DMO12_07935 PF00171 Aldehyde dehydrogenase family DMO12_07944 PF06018 CodY GAF-like domain DMO12_07944 PF17853 GGDEF-like domain DMO12_07944 PF13556 PucR C-terminal helix-turn-helix domain DMO12_07965 PF04328 Selenoprotein, putative DMO12_07968 PF13722 5TM C-terminal transporter carbon starvation CstA DMO12_07968 PF02554 Carbon starvation protein CstA DMO12_07971 PF09285 Elongation factor P, C-terminal DMO12_07971 PF08207 Elongation factor P (EF-P) KOW-like domain DMO12_07971 PF01132 Elongation factor P (EF-P) OB domain DMO12_07974 PF04055 Radical SAM superfamily DMO12_07986 PF01197 Ribosomal protein L31 DMO12_07989 PF13593 SBF-like CPA transporter family (DUF4137) DMO12_07992 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMO12_07995 PF07690 Major Facilitator Superfamily DMO12_07998 PF05362 Lon protease (S16) C-terminal proteolytic domain DMO12_07998 PF13654 AAA domain DMO12_08001 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_08001 PF03466 LysR substrate binding domain DMO12_08004 PF01476 LysM domain DMO12_08004 PF01551 Peptidase family M23 DMO12_08007 PF01975 Survival protein SurE DMO12_08016 PF00768 D-alanyl-D-alanine carboxypeptidase DMO12_08016 PF07943 Penicillin-binding protein 5, C-terminal domain DMO12_08019 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_08022 PF13344 Haloacid dehalogenase-like hydrolase DMO12_08022 PF00293 NUDIX domain DMO12_08028 PF04356 Protein of unknown function (DUF489) DMO12_08031 PF00206 Lyase DMO12_08031 PF08328 Adenylosuccinate lyase C-terminal DMO12_08040 PF01343 Peptidase family S49 DMO12_08040 PF08496 Peptidase family S49 N-terminal DMO12_08043 PF00005 ABC transporter DMO12_08046 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_08049 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_08052 PF12849 PBP superfamily domain DMO12_08055 PF00324 Amino acid permease DMO12_08058 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMO12_08058 PF00205 Thiamine pyrophosphate enzyme, central domain DMO12_08058 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMO12_08061 PF01037 Lrp/AsnC ligand binding domain DMO12_08064 PF00171 Aldehyde dehydrogenase family DMO12_08067 PF00282 Pyridoxal-dependent decarboxylase conserved domain DMO12_08070 PF00202 Aminotransferase class-III DMO12_08076 PF00440 Bacterial regulatory proteins, tetR family DMO12_08076 PF17754 MftR C-terminal domain DMO12_08082 PF00487 Fatty acid desaturase DMO12_08085 PF00970 Oxidoreductase FAD-binding domain DMO12_08085 PF00175 Oxidoreductase NAD-binding domain DMO12_08085 PF00111 2Fe-2S iron-sulfur cluster binding domain DMO12_08088 PF00440 Bacterial regulatory proteins, tetR family DMO12_08094 PF00176 SNF2 family N-terminal domain DMO12_08094 PF12137 RNA polymerase recycling family C-terminal DMO12_08094 PF18337 RapA N-terminal Tudor like domain DMO12_08094 PF18339 RapA N-terminal Tudor like domain 1 DMO12_08094 PF00271 Helicase conserved C-terminal domain DMO12_08097 PF00849 RNA pseudouridylate synthase DMO12_08103 PF00202 Aminotransferase class-III DMO12_08106 PF02581 Thiamine monophosphate synthase DMO12_08121 PF05193 Peptidase M16 inactive domain DMO12_08121 PF00675 Insulinase (Peptidase family M16) DMO12_08124 PF02567 Phenazine biosynthesis-like protein DMO12_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_08130 PF03466 LysR substrate binding domain DMO12_08133 PF06779 Uncharacterised MFS-type transporter YbfB DMO12_08142 PF00180 Isocitrate/isopropylmalate dehydrogenase DMO12_08145 PF00849 RNA pseudouridylate synthase DMO12_08148 PF03971 Monomeric isocitrate dehydrogenase DMO12_08154 PF07943 Penicillin-binding protein 5, C-terminal domain DMO12_08154 PF00768 D-alanyl-D-alanine carboxypeptidase DMO12_08157 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_08160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMO12_08163 PF03441 FAD binding domain of DNA photolyase DMO12_08163 PF00875 DNA photolyase DMO12_08181 PF02350 UDP-N-acetylglucosamine 2-epimerase DMO12_08190 PF03060 Nitronate monooxygenase DMO12_08193 PF01207 Dihydrouridine synthase (Dus) DMO12_08196 PF00589 Phage integrase family DMO12_08403 PF07759 Protein of unknown function (DUF1615) DMO12_08409 PF01472 PUA domain DMO12_08409 PF00696 Amino acid kinase family DMO12_08412 PF01018 GTP1/OBG DMO12_08412 PF01926 50S ribosome-binding GTPase DMO12_08421 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DMO12_08421 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DMO12_08424 PF00892 EamA-like transporter family DMO12_08430 PF04851 Type III restriction enzyme, res subunit DMO12_08430 PF02151 UvrB/uvrC motif DMO12_08430 PF12344 Ultra-violet resistance protein B DMO12_08430 PF17757 UvrB interaction domain DMO12_08430 PF00271 Helicase conserved C-terminal domain DMO12_08436 PF00990 Diguanylate cyclase, GGDEF domain DMO12_08436 PF17151 Periplasmic sensor domain DMO12_08457 PF00106 short chain dehydrogenase DMO12_08460 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DMO12_08463 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DMO12_08466 PF02565 Recombination protein O C terminal DMO12_08466 PF11967 Recombination protein O N terminal DMO12_08472 PF01926 50S ribosome-binding GTPase DMO12_08472 PF07650 KH domain DMO12_08475 PF14622 Ribonuclease-III-like DMO12_08475 PF00035 Double-stranded RNA binding motif DMO12_08481 PF10502 Signal peptidase, peptidase S26 DMO12_08484 PF00679 Elongation factor G C-terminus DMO12_08484 PF06421 GTP-binding protein LepA C-terminus DMO12_08484 PF03144 Elongation factor Tu domain 2 DMO12_08484 PF00009 Elongation factor Tu GTP binding domain DMO12_08490 PF13180 PDZ domain DMO12_08493 PF00890 FAD binding domain DMO12_08493 PF02910 Fumarate reductase flavoprotein C-term DMO12_08499 PF02223 Thymidylate kinase DMO12_08502 PF02618 YceG-like family DMO12_08505 PF01063 Amino-transferase class IV DMO12_08514 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_08517 PF00528 Binding-protein-dependent transport system inner membrane component DMO12_08520 PF00005 ABC transporter DMO12_08520 PF12857 TOBE-like domain DMO12_08523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_08523 PF03466 LysR substrate binding domain DMO12_08529 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DMO12_08529 PF14602 Hexapeptide repeat of succinyl-transferase DMO12_08529 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_08535 PF06508 Queuosine biosynthesis protein QueC DMO12_08544 PF00578 AhpC/TSA family DMO12_08550 PF00293 NUDIX domain DMO12_08550 PF01467 Cytidylyltransferase-like DMO12_08553 PF00378 Enoyl-CoA hydratase/isomerase DMO12_08556 PF01784 NIF3 (NGG1p interacting factor 3) DMO12_08562 PF07690 Major Facilitator Superfamily DMO12_08565 PF02769 AIR synthase related protein, C-terminal domain DMO12_08565 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DMO12_08565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DMO12_08568 PF01966 HD domain DMO12_08571 PF01330 RuvA N terminal domain DMO12_08571 PF07499 RuvA, C-terminal domain DMO12_08574 PF05496 Holliday junction DNA helicase RuvB P-loop domain DMO12_08574 PF05491 RuvB C-terminal winged helix domain DMO12_08574 PF17864 RuvB AAA lid domain DMO12_08577 PF07687 Peptidase dimerisation domain DMO12_08577 PF01546 Peptidase family M20/M25/M40 DMO12_08580 PF03061 Thioesterase superfamily DMO12_08583 PF01618 MotA/TolQ/ExbB proton channel family DMO12_08586 PF02472 Biopolymer transport protein ExbD/TolR DMO12_08592 PF07676 WD40-like Beta Propeller Repeat DMO12_08592 PF04052 TolB amino-terminal domain DMO12_08595 PF00691 OmpA family DMO12_08601 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DMO12_08604 PF00588 SpoU rRNA Methylase family DMO12_08604 PF08032 RNA 2'-O ribose methyltransferase substrate binding DMO12_08622 PF00308 Bacterial dnaA protein DMO12_08622 PF08299 Bacterial dnaA protein helix-turn-helix DMO12_08622 PF11638 DnaA N-terminal domain DMO12_08625 PF01594 AI-2E family transporter DMO12_08628 PF02769 AIR synthase related protein, C-terminal domain DMO12_08628 PF00586 AIR synthase related protein, N-terminal domain DMO12_08631 PF00551 Formyl transferase DMO12_08634 PF12697 Alpha/beta hydrolase family DMO12_08637 PF06965 Na+/H+ antiporter 1 DMO12_08637 PF01343 Peptidase family S49 DMO12_08643 PF00753 Metallo-beta-lactamase superfamily DMO12_08643 PF13567 Domain of unknown function (DUF4131) DMO12_08643 PF03772 Competence protein DMO12_08646 PF00005 ABC transporter DMO12_08649 PF02687 FtsX-like permease family DMO12_08649 PF12704 MacB-like periplasmic core domain DMO12_08655 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DMO12_08664 PF00266 Aminotransferase class-V DMO12_08670 PF13533 Biotin-lipoyl like DMO12_08682 PF00535 Glycosyl transferase family 2 DMO12_08691 PF00521 DNA gyrase/topoisomerase IV, subunit A DMO12_08691 PF03989 DNA gyrase C-terminal domain, beta-propeller DMO12_08694 PF01012 Electron transfer flavoprotein domain DMO12_08694 PF00766 Electron transfer flavoprotein FAD-binding domain DMO12_08697 PF01012 Electron transfer flavoprotein domain DMO12_08700 PF02899 Phage integrase, N-terminal SAM-like domain DMO12_08700 PF00589 Phage integrase family DMO12_08703 PF01810 LysE type translocator DMO12_08706 PF01678 Diaminopimelate epimerase DMO12_08709 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DMO12_08709 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DMO12_08715 PF00324 Amino acid permease DMO12_08718 PF18073 Rubredoxin metal binding domain DMO12_08724 PF00152 tRNA synthetases class II (D, K and N) DMO12_08727 PF11890 Domain of unknown function (DUF3410) DMO12_08727 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMO12_08727 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMO12_08730 PF06803 Protein of unknown function (DUF1232) DMO12_08733 PF02634 FdhD/NarQ family DMO12_08736 PF00384 Molybdopterin oxidoreductase DMO12_08739 PF02595 Glycerate kinase family DMO12_08748 PF00881 Nitroreductase family DMO12_08763 PF00975 Thioesterase domain DMO12_08763 PF13193 AMP-binding enzyme C-terminal domain DMO12_08763 PF00668 Condensation domain DMO12_08763 PF00550 Phosphopantetheine attachment site DMO12_08763 PF00501 AMP-binding enzyme DMO12_08772 PF03449 Transcription elongation factor, N-terminal DMO12_08772 PF01272 Transcription elongation factor, GreA/GreB, C-term DMO12_08775 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMO12_08775 PF01464 Transglycosylase SLT domain DMO12_08781 PF01171 PP-loop family DMO12_08784 PF01464 Transglycosylase SLT domain DMO12_08787 PF01435 Peptidase family M48 DMO12_08793 PF00873 AcrB/AcrD/AcrF family DMO12_08796 PF03009 Glycerophosphoryl diester phosphodiesterase family DMO12_08799 PF00753 Metallo-beta-lactamase superfamily DMO12_08802 PF01219 Prokaryotic diacylglycerol kinase DMO12_08805 PF00118 TCP-1/cpn60 chaperonin family DMO12_08808 PF00166 Chaperonin 10 Kd subunit DMO12_08814 PF00149 Calcineurin-like phosphoesterase DMO12_08817 PF00781 Diacylglycerol kinase catalytic domain DMO12_08820 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DMO12_08820 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DMO12_08823 PF01266 FAD dependent oxidoreductase DMO12_08823 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DMO12_08826 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DMO12_08826 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DMO12_08829 PF00083 Sugar (and other) transporter DMO12_08838 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DMO12_08838 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DMO12_08847 PF09423 PhoD-like phosphatase DMO12_08847 PF16655 PhoD-like phosphatase, N-terminal domain DMO12_08859 PF00809 Pterin binding enzyme DMO12_08862 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_08862 PF17862 AAA+ lid domain DMO12_08862 PF06480 FtsH Extracellular DMO12_08862 PF01434 Peptidase family M41 DMO12_08865 PF01728 FtsJ-like methyltransferase DMO12_08868 PF01985 CRS1 / YhbY (CRM) domain DMO12_08877 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DMO12_08877 PF00117 Glutamine amidotransferase class-I DMO12_08880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DMO12_08880 PF02142 MGS-like domain DMO12_08880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_08883 PF01272 Transcription elongation factor, GreA/GreB, C-term DMO12_08883 PF03449 Transcription elongation factor, N-terminal DMO12_08886 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_08889 PF00582 Universal stress protein family DMO12_08892 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMO12_08898 PF09587 Bacterial capsule synthesis protein PGA_cap DMO12_08907 PF00999 Sodium/hydrogen exchanger family DMO12_08910 PF04228 Putative neutral zinc metallopeptidase DMO12_08913 PF05661 Protein of unknown function (DUF808) DMO12_08916 PF00579 tRNA synthetases class I (W and Y) DMO12_08919 PF00549 CoA-ligase DMO12_08919 PF02629 CoA binding domain DMO12_08922 PF08442 ATP-grasp domain DMO12_08922 PF00549 CoA-ligase DMO12_08925 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_08925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMO12_08928 PF02817 e3 binding domain DMO12_08928 PF00364 Biotin-requiring enzyme DMO12_08928 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DMO12_08931 PF16870 2-oxoglutarate dehydrogenase C-terminal DMO12_08931 PF16078 2-oxoglutarate dehydrogenase N-terminus DMO12_08931 PF00676 Dehydrogenase E1 component DMO12_08931 PF02779 Transketolase, pyrimidine binding domain DMO12_08934 PF13085 2Fe-2S iron-sulfur cluster binding domain DMO12_08937 PF02910 Fumarate reductase flavoprotein C-term DMO12_08937 PF00890 FAD binding domain DMO12_08940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DMO12_08943 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DMO12_08946 PF00285 Citrate synthase, C-terminal domain DMO12_08958 PF00665 Integrase core domain DMO12_08958 PF13936 Helix-turn-helix domain DMO12_08970 PF03979 Sigma-70 factor, region 1.1 DMO12_08970 PF04539 Sigma-70 region 3 DMO12_08970 PF04545 Sigma-70, region 4 DMO12_08970 PF04542 Sigma-70 region 2 DMO12_08970 PF00140 Sigma-70 factor, region 1.2 DMO12_08970 PF04546 Sigma-70, non-essential region DMO12_08973 PF04359 Protein of unknown function (DUF493) DMO12_08976 PF03099 Biotin/lipoate A/B protein ligase family DMO12_08982 PF00465 Iron-containing alcohol dehydrogenase DMO12_08985 PF13520 Amino acid permease DMO12_08988 PF03358 NADPH-dependent FMN reductase DMO12_08991 PF01638 HxlR-like helix-turn-helix DMO12_08994 PF00588 SpoU rRNA Methylase family DMO12_08997 PF10414 Sirohaem synthase dimerisation region DMO12_08997 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMO12_08997 PF14824 Sirohaem biosynthesis protein central DMO12_09000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMO12_09000 PF02403 Seryl-tRNA synthetase N-terminal domain DMO12_09006 PF03548 Outer membrane lipoprotein carrier protein LolA DMO12_09009 PF01016 Ribosomal L27 protein DMO12_09012 PF00829 Ribosomal prokaryotic L21 protein DMO12_09015 PF00348 Polyprenyl synthetase DMO12_09021 PF01569 PAP2 superfamily DMO12_09024 PF00529 HlyD membrane-fusion protein of T1SS DMO12_09024 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_09027 PF00873 AcrB/AcrD/AcrF family DMO12_09030 PF02321 Outer membrane efflux protein DMO12_09033 PF01906 Putative heavy-metal-binding DMO12_09036 PF01906 Putative heavy-metal-binding DMO12_09048 PF08264 Anticodon-binding domain of tRNA DMO12_09048 PF10458 Valyl tRNA synthetase tRNA binding arm DMO12_09048 PF00133 tRNA synthetases class I (I, L, M and V) DMO12_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_09060 PF03466 LysR substrate binding domain DMO12_09063 PF00909 Ammonium Transporter Family DMO12_09069 PF08521 Two-component sensor kinase N-terminal DMO12_09069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_09069 PF00512 His Kinase A (phospho-acceptor) domain DMO12_09072 PF00486 Transcriptional regulatory protein, C terminal DMO12_09072 PF00072 Response regulator receiver domain DMO12_09075 PF00884 Sulfatase DMO12_09075 PF08019 Phosphoethanolamine transferase EptA/EptB DMO12_09087 PF01734 Patatin-like phospholipase DMO12_09093 PF01145 SPFH domain / Band 7 family DMO12_09096 PF04237 YjbR DMO12_09099 PF00348 Polyprenyl synthetase DMO12_09102 PF04303 PrpF protein DMO12_09105 PF00324 Amino acid permease DMO12_09111 PF01965 DJ-1/PfpI family DMO12_09114 PF14765 Polyketide synthase dehydratase DMO12_09114 PF00698 Acyl transferase domain DMO12_09114 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_09114 PF08990 Erythronolide synthase docking DMO12_09114 PF09277 Erythronolide synthase, docking DMO12_09114 PF16197 Ketoacyl-synthetase C-terminal extension DMO12_09114 PF00109 Beta-ketoacyl synthase, N-terminal domain DMO12_09114 PF02801 Beta-ketoacyl synthase, C-terminal domain DMO12_09114 PF08659 KR domain DMO12_09114 PF00550 Phosphopantetheine attachment site DMO12_09117 PF12833 Helix-turn-helix domain DMO12_09117 PF06719 AraC-type transcriptional regulator N-terminus DMO12_09120 PF02673 Bacitracin resistance protein BacA DMO12_09132 PF02525 Flavodoxin-like fold DMO12_09141 PF01507 Phosphoadenosine phosphosulfate reductase family DMO12_09144 PF06974 Protein of unknown function (DUF1298) DMO12_09144 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DMO12_09150 PF00575 S1 RNA binding domain DMO12_09150 PF10150 Ribonuclease E/G family DMO12_09153 PF02545 Maf-like protein DMO12_09156 PF04093 rod shape-determining protein MreD DMO12_09159 PF04085 rod shape-determining protein MreC DMO12_09165 PF02686 Glu-tRNAGln amidotransferase C subunit DMO12_09168 PF01425 Amidase DMO12_09171 PF02637 GatB domain DMO12_09171 PF02934 GatB/GatE catalytic domain DMO12_09189 PF05992 SbmA/BacA-like family DMO12_09192 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_09192 PF13291 ACT domain DMO12_09195 PF01734 Patatin-like phospholipase DMO12_09198 PF01235 Sodium:alanine symporter family DMO12_09204 PF00881 Nitroreductase family DMO12_09207 PF07690 Major Facilitator Superfamily DMO12_09210 PF12805 FUSC-like inner membrane protein yccS DMO12_09216 PF00667 FAD binding domain DMO12_09216 PF00258 Flavodoxin DMO12_09216 PF00175 Oxidoreductase NAD-binding domain DMO12_09240 PF03734 L,D-transpeptidase catalytic domain DMO12_09240 PF17969 L,D-transpeptidase C-terminal domain DMO12_09243 PF04304 Protein of unknown function (DUF454) DMO12_09249 PF08085 Entericidin EcnA/B family DMO12_09252 PF01546 Peptidase family M20/M25/M40 DMO12_09252 PF07687 Peptidase dimerisation domain DMO12_09258 PF00072 Response regulator receiver domain DMO12_09258 PF01627 Hpt domain DMO12_09258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_09258 PF01584 CheW-like domain DMO12_09261 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DMO12_09261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMO12_09264 PF01584 CheW-like domain DMO12_09267 PF00072 Response regulator receiver domain DMO12_09270 PF00072 Response regulator receiver domain DMO12_09279 PF00873 AcrB/AcrD/AcrF family DMO12_09282 PF03129 Anticodon binding domain DMO12_09282 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMO12_09282 PF04073 Aminoacyl-tRNA editing domain DMO12_09285 PF07411 Domain of unknown function (DUF1508) DMO12_09288 PF03831 PhnA domain DMO12_09288 PF08274 PhnA Zinc-Ribbon DMO12_09291 PF04343 Protein of unknown function, DUF488 DMO12_09297 PF01571 Aminomethyltransferase folate-binding domain DMO12_09300 PF13098 Thioredoxin-like domain DMO12_09300 PF10411 Disulfide bond isomerase protein N-terminus DMO12_09306 PF03547 Membrane transport protein DMO12_09309 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_09312 PF07715 TonB-dependent Receptor Plug Domain DMO12_09312 PF00593 TonB dependent receptor DMO12_09315 PF02245 Methylpurine-DNA glycosylase (MPG) DMO12_09318 PF06827 Zinc finger found in FPG and IleRS DMO12_09318 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DMO12_09318 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DMO12_09327 PF01741 Large-conductance mechanosensitive channel, MscL DMO12_09333 PF00860 Permease family DMO12_09336 PF05175 Methyltransferase small domain DMO12_09336 PF08468 Methyltransferase small domain N-terminal DMO12_09339 PF00324 Amino acid permease DMO12_09342 PF01139 tRNA-splicing ligase RtcB DMO12_09348 PF00691 OmpA family DMO12_09348 PF13505 Outer membrane protein beta-barrel domain DMO12_09354 PF00108 Thiolase, N-terminal domain DMO12_09354 PF02803 Thiolase, C-terminal domain DMO12_09360 PF00893 Small Multidrug Resistance protein DMO12_09366 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMO12_09366 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMO12_09369 PF01011 PQQ enzyme repeat DMO12_09372 PF04966 Carbohydrate-selective porin, OprB family DMO12_09375 PF02515 CoA-transferase family III DMO12_09378 PF12833 Helix-turn-helix domain DMO12_09378 PF02311 AraC-like ligand binding domain DMO12_09381 PF02803 Thiolase, C-terminal domain DMO12_09381 PF00108 Thiolase, N-terminal domain DMO12_09384 PF00378 Enoyl-CoA hydratase/isomerase DMO12_09384 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMO12_09384 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMO12_09402 PF03006 Haemolysin-III related DMO12_09405 PF00083 Sugar (and other) transporter DMO12_09405 PF07690 Major Facilitator Superfamily DMO12_09411 PF07516 SecA Wing and Scaffold domain DMO12_09411 PF01043 SecA preprotein cross-linking domain DMO12_09411 PF02810 SEC-C motif DMO12_09411 PF07517 SecA DEAD-like domain DMO12_09414 PF10417 C-terminal domain of 1-Cys peroxiredoxin DMO12_09414 PF00578 AhpC/TSA family DMO12_09417 PF00753 Metallo-beta-lactamase superfamily DMO12_09426 PF08245 Mur ligase middle domain DMO12_09426 PF02875 Mur ligase family, glutamate ligase domain DMO12_09429 PF01039 Carboxyl transferase domain DMO12_09432 PF00290 Tryptophan synthase alpha chain DMO12_09447 PF00291 Pyridoxal-phosphate dependent enzyme DMO12_09450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DMO12_09453 PF00593 TonB dependent receptor DMO12_09453 PF07715 TonB-dependent Receptor Plug Domain DMO12_09456 PF01923 Cobalamin adenosyltransferase DMO12_09468 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DMO12_09471 PF00072 Response regulator receiver domain DMO12_09471 PF00486 Transcriptional regulatory protein, C terminal DMO12_09474 PF00512 His Kinase A (phospho-acceptor) domain DMO12_09474 PF00672 HAMP domain DMO12_09474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_09480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_09480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_09480 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_09480 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMO12_09483 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_09483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_09483 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMO12_09483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_09486 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_09486 PF03466 LysR substrate binding domain DMO12_09489 PF00043 Glutathione S-transferase, C-terminal domain DMO12_09489 PF02798 Glutathione S-transferase, N-terminal domain DMO12_09492 PF06146 Phosphate-starvation-inducible E DMO12_09504 PF00593 TonB dependent receptor DMO12_09504 PF07715 TonB-dependent Receptor Plug Domain DMO12_09510 PF01336 OB-fold nucleic acid binding domain DMO12_09510 PF00152 tRNA synthetases class II (D, K and N) DMO12_09510 PF02938 GAD domain DMO12_09513 PF17102 Stealth protein CR3, conserved region 3 DMO12_09513 PF11380 Stealth protein CR2, conserved region 2 DMO12_09513 PF17101 Stealth protein CR1, conserved region 1 DMO12_09528 PF00534 Glycosyl transferases group 1 DMO12_09528 PF13439 Glycosyltransferase Family 4 DMO12_09531 PF00535 Glycosyl transferase family 2 DMO12_09534 PF01522 Polysaccharide deacetylase DMO12_09543 PF01063 Amino-transferase class IV DMO12_09546 PF08335 GlnD PII-uridylyltransferase DMO12_09546 PF03710 Glutamate-ammonia ligase adenylyltransferase DMO12_09549 PF07689 KaiB domain DMO12_09549 PF00512 His Kinase A (phospho-acceptor) domain DMO12_09549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_09564 PF02547 Queuosine biosynthesis protein DMO12_09573 PF01702 Queuine tRNA-ribosyltransferase DMO12_09576 PF02699 Preprotein translocase subunit DMO12_09579 PF02355 Protein export membrane protein DMO12_09579 PF13721 SecD export protein N-terminal TM region DMO12_09579 PF07549 SecD/SecF GG Motif DMO12_09582 PF02355 Protein export membrane protein DMO12_09582 PF07549 SecD/SecF GG Motif DMO12_09585 PF02441 Flavoprotein DMO12_09585 PF04127 DNA / pantothenate metabolism flavoprotein DMO12_09588 PF04002 RadC-like JAB domain DMO12_09591 PF01062 Bestrophin, RFP-TM, chloride channel DMO12_09594 PF02811 PHP domain DMO12_09597 PF04279 Intracellular septation protein A DMO12_09600 PF03795 YCII-related domain DMO12_09606 PF01266 FAD dependent oxidoreductase DMO12_09606 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DMO12_09612 PF04461 Protein of unknown function (DUF520) DMO12_09618 PF03061 Thioesterase superfamily DMO12_09621 PF00085 Thioredoxin DMO12_09624 PF00561 alpha/beta hydrolase fold DMO12_09627 PF00753 Metallo-beta-lactamase superfamily DMO12_09627 PF04273 Putative phosphatase (DUF442) DMO12_09633 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMO12_09633 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_09654 PF00990 Diguanylate cyclase, GGDEF domain DMO12_09654 PF17152 Periplasmic sensor domain DMO12_09657 PF01389 OmpA-like transmembrane domain DMO12_09657 PF00691 OmpA family DMO12_09660 PF10518 TAT (twin-arginine translocation) pathway signal sequence DMO12_09660 PF00149 Calcineurin-like phosphoesterase DMO12_09663 PF13091 PLD-like domain DMO12_09669 PF13167 GTP-binding GTPase N-terminal DMO12_09669 PF01926 50S ribosome-binding GTPase DMO12_09669 PF16360 GTP-binding GTPase Middle Region DMO12_09681 PF00149 Calcineurin-like phosphoesterase DMO12_09684 PF00398 Ribosomal RNA adenine dimethylase DMO12_09687 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DMO12_09690 PF00572 Ribosomal protein L13 DMO12_09693 PF00380 Ribosomal protein S9/S16 DMO12_09696 PF13417 Glutathione S-transferase, N-terminal domain DMO12_09696 PF00043 Glutathione S-transferase, C-terminal domain DMO12_09699 PF04386 Stringent starvation protein B DMO12_09705 PF00289 Biotin carboxylase, N-terminal domain DMO12_09705 PF00364 Biotin-requiring enzyme DMO12_09705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMO12_09705 PF02785 Biotin carboxylase C-terminal domain DMO12_09711 PF00665 Integrase core domain DMO12_09711 PF13936 Helix-turn-helix domain DMO12_09717 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_09717 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_09717 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_09720 PF01039 Carboxyl transferase domain DMO12_09729 PF17932 Tetracyclin repressor-like, C-terminal domain DMO12_09729 PF00440 Bacterial regulatory proteins, tetR family DMO12_09732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_09732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_09732 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_09759 PF01066 CDP-alcohol phosphatidyltransferase DMO12_09762 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DMO12_09774 PF00056 lactate/malate dehydrogenase, NAD binding domain DMO12_09774 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DMO12_09780 PF01551 Peptidase family M23 DMO12_09780 PF10145 Phage-related minor tail protein DMO12_09780 PF01464 Transglycosylase SLT domain DMO12_09783 PF01938 TRAM domain DMO12_09783 PF04055 Radical SAM superfamily DMO12_09783 PF00919 Uncharacterized protein family UPF0004 DMO12_09786 PF02562 PhoH-like protein DMO12_09789 PF02130 Uncharacterized protein family UPF0054 DMO12_09804 PF03358 NADPH-dependent FMN reductase DMO12_09807 PF03631 Virulence factor BrkB DMO12_09810 PF00892 EamA-like transporter family DMO12_09813 PF12833 Helix-turn-helix domain DMO12_09816 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMO12_09843 PF00773 RNB domain DMO12_09843 PF17876 Cold shock domain DMO12_09843 PF08206 Ribonuclease B OB domain DMO12_09843 PF08461 Ribonuclease R winged-helix domain DMO12_09843 PF00575 S1 RNA binding domain DMO12_09846 PF01432 Peptidase family M3 DMO12_09849 PF09526 Probable metal-binding protein (DUF2387) DMO12_09870 PF03937 Flavinator of succinate dehydrogenase DMO12_09873 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_09873 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_09873 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_09876 PF00743 Flavin-binding monooxygenase-like DMO12_09879 PF01196 Ribosomal protein L17 DMO12_09882 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DMO12_09882 PF01000 RNA polymerase Rpb3/RpoA insert domain DMO12_09882 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DMO12_09885 PF01479 S4 domain DMO12_09885 PF00163 Ribosomal protein S4/S9 N-terminal domain DMO12_09888 PF00411 Ribosomal protein S11 DMO12_09891 PF00416 Ribosomal protein S13/S18 DMO12_09894 PF00444 Ribosomal protein L36 DMO12_09897 PF00344 SecY translocase DMO12_09900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DMO12_09903 PF00327 Ribosomal protein L30p/L7e DMO12_09906 PF03719 Ribosomal protein S5, C-terminal domain DMO12_09906 PF00333 Ribosomal protein S5, N-terminal domain DMO12_09909 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DMO12_09912 PF00347 Ribosomal protein L6 DMO12_09915 PF00410 Ribosomal protein S8 DMO12_09918 PF00253 Ribosomal protein S14p/S29e DMO12_09921 PF00673 ribosomal L5P family C-terminus DMO12_09921 PF00281 Ribosomal protein L5 DMO12_09924 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DMO12_09924 PF00467 KOW motif DMO12_09927 PF00238 Ribosomal protein L14p/L23e DMO12_09930 PF00366 Ribosomal protein S17 DMO12_09933 PF00831 Ribosomal L29 protein DMO12_09936 PF00252 Ribosomal protein L16p/L10e DMO12_09939 PF00189 Ribosomal protein S3, C-terminal domain DMO12_09939 PF07650 KH domain DMO12_09942 PF00237 Ribosomal protein L22p/L17e DMO12_09945 PF00203 Ribosomal protein S19 DMO12_09948 PF03947 Ribosomal Proteins L2, C-terminal domain DMO12_09948 PF00181 Ribosomal Proteins L2, RNA binding domain DMO12_09951 PF00276 Ribosomal protein L23 DMO12_09954 PF00573 Ribosomal protein L4/L1 family DMO12_09957 PF00297 Ribosomal protein L3 DMO12_09960 PF00338 Ribosomal protein S10p/S20e DMO12_09963 PF00117 Glutamine amidotransferase class-I DMO12_09966 PF01053 Cys/Met metabolism PLP-dependent enzyme DMO12_09969 PF05872 Bacterial protein of unknown function (DUF853) DMO12_09972 PF00970 Oxidoreductase FAD-binding domain DMO12_09972 PF00042 Globin DMO12_09972 PF00175 Oxidoreductase NAD-binding domain DMO12_09975 PF02082 Transcriptional regulator DMO12_09978 PF01926 50S ribosome-binding GTPase DMO12_09984 PF00375 Sodium:dicarboxylate symporter family DMO12_09990 PF01553 Acyltransferase DMO12_09999 PF00270 DEAD/DEAH box helicase DMO12_09999 PF17191 RecG wedge domain DMO12_09999 PF00271 Helicase conserved C-terminal domain DMO12_10002 PF00156 Phosphoribosyl transferase domain DMO12_10005 PF00293 NUDIX domain DMO12_10008 PF03641 Possible lysine decarboxylase DMO12_10011 PF01544 CorA-like Mg2+ transporter protein DMO12_10017 PF05494 MlaC protein DMO12_10023 PF02405 Permease MlaE DMO12_10026 PF00005 ABC transporter DMO12_10029 PF12343 Cold shock protein DEAD box A DMO12_10029 PF03880 DbpA RNA binding domain DMO12_10029 PF00271 Helicase conserved C-terminal domain DMO12_10029 PF00270 DEAD/DEAH box helicase DMO12_10032 PF00459 Inositol monophosphatase family DMO12_10035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DMO12_10035 PF02780 Transketolase, C-terminal domain DMO12_10035 PF02779 Transketolase, pyrimidine binding domain DMO12_10038 PF00925 GTP cyclohydrolase II DMO12_10041 PF01218 Coproporphyrinogen III oxidase DMO12_10044 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DMO12_10044 PF01488 Shikimate / quinate 5-dehydrogenase DMO12_10044 PF08501 Shikimate dehydrogenase substrate binding domain DMO12_10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMO12_10050 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMO12_10050 PF02770 Acyl-CoA dehydrogenase, middle domain DMO12_10050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMO12_10056 PF04024 PspC domain DMO12_10059 PF00571 CBS domain DMO12_10074 PF02091 Glycyl-tRNA synthetase alpha subunit DMO12_10077 PF02092 Glycyl-tRNA synthetase beta subunit DMO12_10077 PF05746 DALR anticodon binding domain DMO12_10083 PF00892 EamA-like transporter family DMO12_10086 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_10086 PF03466 LysR substrate binding domain DMO12_10104 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DMO12_10107 PF04996 Succinylarginine dihydrolase DMO12_10110 PF00171 Aldehyde dehydrogenase family DMO12_10113 PF04958 Arginine N-succinyltransferase beta subunit DMO12_10116 PF00202 Aminotransferase class-III DMO12_10119 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DMO12_10119 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DMO12_10122 PF00324 Amino acid permease DMO12_10143 PF01594 AI-2E family transporter DMO12_10146 PF00080 Copper/zinc superoxide dismutase (SODC) DMO12_10149 PF12805 FUSC-like inner membrane protein yccS DMO12_10152 PF07690 Major Facilitator Superfamily DMO12_10158 PF02525 Flavodoxin-like fold DMO12_10161 PF03992 Antibiotic biosynthesis monooxygenase DMO12_10167 PF02913 FAD linked oxidases, C-terminal domain DMO12_10167 PF01565 FAD binding domain DMO12_10170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMO12_10170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMO12_10173 PF00892 EamA-like transporter family DMO12_10176 PF00892 EamA-like transporter family DMO12_10182 PF01925 Sulfite exporter TauE/SafE DMO12_10185 PF09157 Pseudouridine synthase II TruB, C-terminal DMO12_10185 PF16198 tRNA pseudouridylate synthase B C-terminal domain DMO12_10185 PF01509 TruB family pseudouridylate synthase (N terminal domain) DMO12_10188 PF03280 Proteobacterial lipase chaperone protein DMO12_10191 PF00561 alpha/beta hydrolase fold DMO12_10194 PF01245 Ribosomal protein L19 DMO12_10197 PF01746 tRNA (Guanine-1)-methyltransferase DMO12_10200 PF01782 RimM N-terminal domain DMO12_10200 PF05239 PRC-barrel domain DMO12_10203 PF00886 Ribosomal protein S16 DMO12_10227 PF02401 LytB protein DMO12_10230 PF00625 Guanylate kinase DMO12_10233 PF01192 RNA polymerase Rpb6 DMO12_10236 PF02824 TGS domain DMO12_10236 PF04607 Region found in RelA / SpoT proteins DMO12_10236 PF13291 ACT domain DMO12_10239 PF01042 Endoribonuclease L-PSP DMO12_10242 PF04324 BFD-like [2Fe-2S] binding domain DMO12_10245 PF00210 Ferritin-like domain DMO12_10248 PF04932 O-Antigen ligase DMO12_10248 PF11846 Virulence factor membrane-bound polymerase, C-terminal DMO12_10248 PF15864 Protein glycosylation ligase DMO12_10260 PF04536 TPM domain DMO12_10263 PF04011 LemA family DMO12_10269 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMO12_10269 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMO12_10272 PF01493 GXGXG motif DMO12_10272 PF01645 Conserved region in glutamate synthase DMO12_10272 PF00310 Glutamine amidotransferases class-II DMO12_10272 PF04898 Glutamate synthase central domain DMO12_10278 PF01761 3-dehydroquinate synthase DMO12_10281 PF01202 Shikimate kinase DMO12_10284 PF07660 Secretin and TonB N terminus short domain DMO12_10284 PF03958 Bacterial type II/III secretion system short domain DMO12_10284 PF00263 Bacterial type II and III secretion system protein DMO12_10284 PF11741 AMIN domain DMO12_10299 PF00912 Transglycosylase DMO12_10299 PF00905 Penicillin binding protein transpeptidase domain DMO12_10299 PF17092 Penicillin-binding protein OB-like domain DMO12_10302 PF13847 Methyltransferase domain DMO12_10308 PF00953 Glycosyl transferase family 4 DMO12_10311 PF01225 Mur ligase family, catalytic domain DMO12_10311 PF08245 Mur ligase middle domain DMO12_10311 PF02875 Mur ligase family, glutamate ligase domain DMO12_10314 PF08245 Mur ligase middle domain DMO12_10314 PF01225 Mur ligase family, catalytic domain DMO12_10314 PF02875 Mur ligase family, glutamate ligase domain DMO12_10317 PF03717 Penicillin-binding Protein dimerisation domain DMO12_10317 PF00905 Penicillin binding protein transpeptidase domain DMO12_10323 PF01795 MraW methylase family DMO12_10332 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMO12_10341 PF00324 Amino acid permease DMO12_10359 PF01545 Cation efflux family DMO12_10362 PF00873 AcrB/AcrD/AcrF family DMO12_10365 PF00529 HlyD membrane-fusion protein of T1SS DMO12_10365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_10380 PF00005 ABC transporter DMO12_10380 PF12848 ABC transporter DMO12_10383 PF01053 Cys/Met metabolism PLP-dependent enzyme DMO12_10386 PF00106 short chain dehydrogenase DMO12_10389 PF01740 STAS domain DMO12_10389 PF00916 Sulfate permease family DMO12_10392 PF09371 Tex-like protein N-terminal domain DMO12_10392 PF00575 S1 RNA binding domain DMO12_10392 PF16921 Tex protein YqgF-like domain DMO12_10392 PF17674 HHH domain DMO12_10395 PF00486 Transcriptional regulatory protein, C terminal DMO12_10395 PF00072 Response regulator receiver domain DMO12_10398 PF00512 His Kinase A (phospho-acceptor) domain DMO12_10398 PF00672 HAMP domain DMO12_10398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_10401 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DMO12_10401 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DMO12_10404 PF00583 Acetyltransferase (GNAT) family DMO12_10416 PF00475 Imidazoleglycerol-phosphate dehydratase DMO12_10419 PF00117 Glutamine amidotransferase class-I DMO12_10428 PF00977 Histidine biosynthesis protein DMO12_10443 PF01636 Phosphotransferase enzyme family DMO12_10446 PF00977 Histidine biosynthesis protein DMO12_10455 PF00230 Major intrinsic protein DMO12_10470 PF02705 K+ potassium transporter DMO12_10476 PF12833 Helix-turn-helix domain DMO12_10488 PF02525 Flavodoxin-like fold DMO12_10491 PF01638 HxlR-like helix-turn-helix DMO12_10503 PF01638 HxlR-like helix-turn-helix DMO12_10512 PF12833 Helix-turn-helix domain DMO12_10512 PF02311 AraC-like ligand binding domain DMO12_10515 PF00248 Aldo/keto reductase family DMO12_10530 PF03466 LysR substrate binding domain DMO12_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_10533 PF07690 Major Facilitator Superfamily DMO12_10548 PF01593 Flavin containing amine oxidoreductase DMO12_10551 PF05726 Pirin C-terminal cupin domain DMO12_10551 PF02678 Pirin DMO12_10554 PF00857 Isochorismatase family DMO12_10557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_10560 PF00171 Aldehyde dehydrogenase family DMO12_10563 PF00202 Aminotransferase class-III DMO12_10566 PF00392 Bacterial regulatory proteins, gntR family DMO12_10566 PF00155 Aminotransferase class I and II DMO12_10569 PF00324 Amino acid permease DMO12_10575 PF03591 AzlC protein DMO12_10581 PF00436 Single-strand binding protein family DMO12_10584 PF07690 Major Facilitator Superfamily DMO12_10590 PF02581 Thiamine monophosphate synthase DMO12_10590 PF08543 Phosphomethylpyrimidine kinase DMO12_10590 PF03070 TENA/THI-4/PQQC family DMO12_10593 PF06942 GlpM protein DMO12_10599 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_10599 PF00107 Zinc-binding dehydrogenase DMO12_10602 PF16925 Tetracyclin repressor-like, C-terminal domain DMO12_10602 PF00440 Bacterial regulatory proteins, tetR family DMO12_10605 PF00005 ABC transporter DMO12_10605 PF17760 UvrA interaction domain DMO12_10605 PF17755 UvrA DNA-binding domain DMO12_10608 PF00990 Diguanylate cyclase, GGDEF domain DMO12_10608 PF17158 Membrane-associated sensor, integral membrane domain DMO12_10614 PF02028 BCCT, betaine/carnitine/choline family transporter DMO12_10620 PF00474 Sodium:solute symporter family DMO12_10623 PF04341 Protein of unknown function, DUF485 DMO12_10626 PF00512 His Kinase A (phospho-acceptor) domain DMO12_10626 PF00072 Response regulator receiver domain DMO12_10626 PF01627 Hpt domain DMO12_10626 PF00672 HAMP domain DMO12_10626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_10632 PF00196 Bacterial regulatory proteins, luxR family DMO12_10632 PF00072 Response regulator receiver domain DMO12_10635 PF03358 NADPH-dependent FMN reductase DMO12_10638 PF00296 Luciferase-like monooxygenase DMO12_10641 PF01037 Lrp/AsnC ligand binding domain DMO12_10644 PF00857 Isochorismatase family DMO12_10647 PF00501 AMP-binding enzyme DMO12_10647 PF16177 Acetyl-coenzyme A synthetase N-terminus DMO12_10647 PF13193 AMP-binding enzyme C-terminal domain DMO12_10653 PF00924 Mechanosensitive ion channel DMO12_10656 PF04452 RNA methyltransferase DMO12_10659 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DMO12_10662 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMO12_10671 PF03462 PCRF domain DMO12_10671 PF00472 RF-1 domain DMO12_10677 PF01368 DHH family DMO12_10677 PF02272 DHHA1 domain DMO12_10677 PF17768 RecJ OB domain DMO12_10680 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DMO12_10680 PF01243 Pyridoxamine 5'-phosphate oxidase DMO12_10683 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMO12_10683 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMO12_10683 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMO12_10683 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMO12_10686 PF00571 CBS domain DMO12_10686 PF00478 IMP dehydrogenase / GMP reductase domain DMO12_10689 PF03692 Putative zinc- or iron-chelating domain DMO12_10692 PF01613 Flavin reductase like domain DMO12_10692 PF00258 Flavodoxin DMO12_10695 PF07715 TonB-dependent Receptor Plug Domain DMO12_10695 PF00593 TonB dependent receptor DMO12_10698 PF01169 Uncharacterized protein family UPF0016 DMO12_10704 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DMO12_10704 PF00364 Biotin-requiring enzyme DMO12_10704 PF02817 e3 binding domain DMO12_10707 PF00456 Transketolase, thiamine diphosphate binding domain DMO12_10707 PF17831 Pyruvate dehydrogenase E1 component middle domain DMO12_10710 PF01551 Peptidase family M23 DMO12_10716 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DMO12_10719 PF12327 FtsZ family, C-terminal domain DMO12_10719 PF00091 Tubulin/FtsZ family, GTPase domain DMO12_10722 PF02491 SHS2 domain inserted in FTSA DMO12_10725 PF03799 Cell division protein FtsQ DMO12_10725 PF08478 POTRA domain, FtsQ-type DMO12_10728 PF07478 D-ala D-ala ligase C-terminus DMO12_10728 PF01820 D-ala D-ala ligase N-terminus DMO12_10731 PF08245 Mur ligase middle domain DMO12_10731 PF02875 Mur ligase family, glutamate ligase domain DMO12_10731 PF01225 Mur ligase family, catalytic domain DMO12_10734 PF04101 Glycosyltransferase family 28 C-terminal domain DMO12_10734 PF03033 Glycosyltransferase family 28 N-terminal domain DMO12_10737 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DMO12_10737 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DMO12_10743 PF00593 TonB dependent receptor DMO12_10743 PF07715 TonB-dependent Receptor Plug Domain DMO12_10746 PF00156 Phosphoribosyl transferase domain DMO12_10749 PF03372 Endonuclease/Exonuclease/phosphatase family DMO12_10752 PF03960 ArsC family DMO12_10758 PF07859 alpha/beta hydrolase fold DMO12_10764 PF07694 5TMR of 5TMR-LYT DMO12_10764 PF00990 Diguanylate cyclase, GGDEF domain DMO12_10767 PF02683 Cytochrome C biogenesis protein transmembrane region DMO12_10767 PF11412 Disulphide bond corrector protein DsbC DMO12_10785 PF00576 HIUase/Transthyretin family DMO12_10788 PF00860 Permease family DMO12_10794 PF01494 FAD binding domain DMO12_10797 PF03561 Allantoicase repeat DMO12_10800 PF04115 Ureidoglycolate lyase DMO12_10803 PF00986 DNA gyrase B subunit, carboxyl terminus DMO12_10803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_10803 PF01751 Toprim domain DMO12_10803 PF00204 DNA gyrase B DMO12_10806 PF05728 Uncharacterised protein family (UPF0227) DMO12_10821 PF00182 Chitinase class I DMO12_10824 PF04717 Type VI secretion system, phage-baseplate injector DMO12_10827 PF02600 Disulfide bond formation protein DsbB DMO12_10830 PF04262 Glutamate-cysteine ligase DMO12_10839 PF04286 Protein of unknown function (DUF445) DMO12_10842 PF00155 Aminotransferase class I and II DMO12_10845 PF01554 MatE DMO12_10848 PF00106 short chain dehydrogenase DMO12_10854 PF00072 Response regulator receiver domain DMO12_10854 PF00486 Transcriptional regulatory protein, C terminal DMO12_10857 PF00512 His Kinase A (phospho-acceptor) domain DMO12_10857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMO12_10857 PF00989 PAS fold DMO12_10857 PF11808 Phosphate regulon sensor protein PhoR DMO12_10866 PF03069 Acetamidase/Formamidase family DMO12_10869 PF02666 Phosphatidylserine decarboxylase DMO12_10872 PF00581 Rhodanese-like domain DMO12_10875 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DMO12_10875 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DMO12_10881 PF06628 Catalase-related immune-responsive DMO12_10881 PF00199 Catalase DMO12_10884 PF02580 D-Tyr-tRNA(Tyr) deacylase DMO12_10899 PF00925 GTP cyclohydrolase II DMO12_10899 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMO12_10902 PF00885 6,7-dimethyl-8-ribityllumazine synthase DMO12_10905 PF01029 NusB family DMO12_10908 PF00586 AIR synthase related protein, N-terminal domain DMO12_10908 PF02769 AIR synthase related protein, C-terminal domain DMO12_10911 PF04608 Phosphatidylglycerophosphatase A DMO12_10914 PF14602 Hexapeptide repeat of succinyl-transferase DMO12_10914 PF00132 Bacterial transferase hexapeptide (six repeats) DMO12_10914 PF12804 MobA-like NTP transferase domain DMO12_10917 PF01380 SIS domain DMO12_10920 PF01177 Asp/Glu/Hydantoin racemase DMO12_10923 PF13419 Haloacid dehalogenase-like hydrolase DMO12_10929 PF00491 Arginase family DMO12_10932 PF01979 Amidohydrolase family DMO12_10935 PF00324 Amino acid permease DMO12_10938 PF00221 Aromatic amino acid lyase DMO12_10941 PF17392 Urocanase C-terminal domain DMO12_10941 PF01175 Urocanase Rossmann-like domain DMO12_10941 PF17391 Urocanase N-terminal domain DMO12_10944 PF05962 HutD DMO12_10947 PF00392 Bacterial regulatory proteins, gntR family DMO12_10947 PF07702 UTRA domain DMO12_10953 PF07683 Cobalamin synthesis protein cobW C-terminal domain DMO12_10953 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMO12_10959 PF00324 Amino acid permease DMO12_10965 PF14497 Glutathione S-transferase, C-terminal domain DMO12_10965 PF02798 Glutathione S-transferase, N-terminal domain DMO12_10968 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMO12_10974 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMO12_10977 PF04463 Protein of unknown function (DUF523) DMO12_10980 PF01554 MatE DMO12_10983 PF01758 Sodium Bile acid symporter family DMO12_10986 PF00857 Isochorismatase family DMO12_10989 PF00701 Dihydrodipicolinate synthetase family DMO12_10995 PF01259 SAICAR synthetase DMO12_11001 PF01226 Formate/nitrite transporter DMO12_11004 PF16193 AAA C-terminal domain DMO12_11004 PF00004 ATPase family associated with various cellular activities (AAA) DMO12_11004 PF12002 MgsA AAA+ ATPase C terminal DMO12_11007 PF07995 Glucose / Sorbosone dehydrogenase DMO12_11010 PF03692 Putative zinc- or iron-chelating domain DMO12_11013 PF07043 Protein of unknown function (DUF1328) DMO12_11022 PF10576 Iron-sulfur binding domain of endonuclease III DMO12_11022 PF14815 NUDIX domain DMO12_11022 PF00730 HhH-GPD superfamily base excision DNA repair protein DMO12_11022 PF00633 Helix-hairpin-helix motif DMO12_11031 PF03352 Methyladenine glycosylase DMO12_11034 PF00107 Zinc-binding dehydrogenase DMO12_11034 PF08240 Alcohol dehydrogenase GroES-like domain DMO12_11037 PF00155 Aminotransferase class I and II DMO12_11037 PF00392 Bacterial regulatory proteins, gntR family DMO12_11043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_11043 PF03466 LysR substrate binding domain DMO12_11046 PF00248 Aldo/keto reductase family DMO12_11049 PF07690 Major Facilitator Superfamily DMO12_11055 PF05173 Dihydrodipicolinate reductase, C-terminus DMO12_11055 PF01113 Dihydrodipicolinate reductase, N-terminus DMO12_11061 PF00226 DnaJ domain DMO12_11061 PF01556 DnaJ C terminal domain DMO12_11061 PF00684 DnaJ central domain DMO12_11067 PF00873 AcrB/AcrD/AcrF family DMO12_11070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMO12_11073 PF00440 Bacterial regulatory proteins, tetR family DMO12_11073 PF08361 MAATS-type transcriptional repressor, C-terminal region DMO12_11076 PF00311 Phosphoenolpyruvate carboxylase DMO12_11079 PF00860 Permease family DMO12_11082 PF03466 LysR substrate binding domain DMO12_11082 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMO12_11091 PF00920 Dehydratase family DMO12_11094 PF02911 Formyl transferase, C-terminal domain DMO12_11094 PF00551 Formyl transferase DMO12_11097 PF01189 16S rRNA methyltransferase RsmB/F DMO12_11097 PF01029 NusB family DMO12_11103 PF00209 Sodium:neurotransmitter symporter family DMO12_20015 PF13610 DDE domain DMO12_20018 PF18766 SWI2/SNF2 ATPase DMO12_20018 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DMO12_20018 PF11867 Domain of unknown function (DUF3387) DMO12_20024 PF13614 AAA domain DMO12_20036 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DMO12_20045 PF02796 Helix-turn-helix domain of resolvase DMO12_20045 PF00239 Resolvase, N terminal domain DMO12_20060 PF00905 Penicillin binding protein transpeptidase domain DMO12_20072 PF13610 DDE domain DMO12_30036 PF00565 Staphylococcal nuclease homologue DMO12_30039 PF00816 H-NS histone family DMO12_30072 PF13614 AAA domain DMO12_30075 PF02195 ParB-like nuclease domain DMO12_30075 PF17762 HTH domain found in ParB protein DMO12_30087 PF05816 Toxic anion resistance protein (TelA) DMO12_30141 PF00684 DnaJ central domain DMO12_30141 PF00226 DnaJ domain DMO12_30141 PF01556 DnaJ C terminal domain DMO12_30162 PF18272 single-stranded DNA binding TraI N-terminal subdomain DMO12_30162 PF07057 DNA helicase TraI DMO12_30162 PF18340 DNA relaxase TraI 2B/2B-like domain DMO12_30162 PF08751 TrwC relaxase DMO12_30189 PF13936 Helix-turn-helix domain DMO12_30189 PF00665 Integrase core domain DMO12_30192 PF01636 Phosphotransferase enzyme family DMO12_30195 PF00665 Integrase core domain DMO12_30195 PF13936 Helix-turn-helix domain DMO12_30204 PF00239 Resolvase, N terminal domain DMO12_30204 PF02796 Helix-turn-helix domain of resolvase DMO12_30213 PF01464 Transglycosylase SLT domain DMO12_30231 PF13098 Thioredoxin-like domain DMO12_30231 PF10411 Disulfide bond isomerase protein N-terminus DMO12_30252 PF06834 TraU protein DMO12_30258 PF06986 Type-1V conjugative transfer system mating pair stabilisation DMO12_30267 PF06122 Conjugative relaxosome accessory transposon protein DMO12_30279 PF00817 impB/mucB/samB family DMO12_30279 PF11799 impB/mucB/samB family C-terminal domain DMO12_30279 PF11798 IMS family HHH motif DMO12_30279 PF13438 Domain of unknown function (DUF4113)