locus-tag class description ILR76_00005 PF00308 Bacterial dnaA protein ILR76_00005 PF08299 Bacterial dnaA protein helix-turn-helix ILR76_00005 PF11638 DnaA N-terminal domain ILR76_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ILR76_00010 PF02767 DNA polymerase III beta subunit, central domain ILR76_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ILR76_00015 PF02463 RecF/RecN/SMC N terminal domain ILR76_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_00020 PF18053 DNA gyrase B subunit insert domain ILR76_00020 PF01751 Toprim domain ILR76_00020 PF00204 DNA gyrase B ILR76_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ILR76_00030 PF09335 SNARE associated Golgi protein ILR76_00035 PF00005 ABC transporter ILR76_00035 PF12848 ABC transporter ILR76_00055 PF01521 Iron-sulphur cluster biosynthesis ILR76_00060 PF00561 alpha/beta hydrolase fold ILR76_00065 PF03702 Anhydro-N-acetylmuramic acid kinase ILR76_00070 PF00579 tRNA synthetases class I (W and Y) ILR76_00110 PF00209 Sodium:neurotransmitter symporter family ILR76_00120 PF01189 16S rRNA methyltransferase RsmB/F ILR76_00120 PF01029 NusB family ILR76_00125 PF02911 Formyl transferase, C-terminal domain ILR76_00125 PF00551 Formyl transferase ILR76_00130 PF00920 Dehydratase family ILR76_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_00145 PF03466 LysR substrate binding domain ILR76_00150 PF00860 Permease family ILR76_00155 PF00311 Phosphoenolpyruvate carboxylase ILR76_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region ILR76_00160 PF00440 Bacterial regulatory proteins, tetR family ILR76_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_00170 PF00873 AcrB/AcrD/AcrF family ILR76_00180 PF00226 DnaJ domain ILR76_00180 PF01556 DnaJ C terminal domain ILR76_00180 PF00684 DnaJ central domain ILR76_00190 PF01113 Dihydrodipicolinate reductase, N-terminus ILR76_00190 PF05173 Dihydrodipicolinate reductase, C-terminus ILR76_00200 PF07690 Major Facilitator Superfamily ILR76_00205 PF00248 Aldo/keto reductase family ILR76_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_00210 PF03466 LysR substrate binding domain ILR76_00225 PF00392 Bacterial regulatory proteins, gntR family ILR76_00225 PF00155 Aminotransferase class I and II ILR76_00230 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_00230 PF00107 Zinc-binding dehydrogenase ILR76_00235 PF03352 Methyladenine glycosylase ILR76_00250 PF14815 NUDIX domain ILR76_00250 PF10576 Iron-sulfur binding domain of endonuclease III ILR76_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein ILR76_00250 PF00633 Helix-hairpin-helix motif ILR76_00260 PF02230 Phospholipase/Carboxylesterase ILR76_00265 PF07043 Protein of unknown function (DUF1328) ILR76_00270 PF03692 Putative zinc- or iron-chelating domain ILR76_00275 PF07995 Glucose / Sorbosone dehydrogenase ILR76_00280 PF12002 MgsA AAA+ ATPase C terminal ILR76_00280 PF16193 AAA C-terminal domain ILR76_00280 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_00285 PF01226 Formate/nitrite transporter ILR76_00300 PF01259 SAICAR synthetase ILR76_00310 PF00701 Dihydrodipicolinate synthetase family ILR76_00315 PF00857 Isochorismatase family ILR76_00320 PF01758 Sodium Bile acid symporter family ILR76_00325 PF01554 MatE ILR76_00330 PF04463 Protein of unknown function (DUF523) ILR76_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR76_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR76_00350 PF14497 Glutathione S-transferase, C-terminal domain ILR76_00350 PF02798 Glutathione S-transferase, N-terminal domain ILR76_00360 PF00324 Amino acid permease ILR76_00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR76_00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILR76_00380 PF07702 UTRA domain ILR76_00380 PF00392 Bacterial regulatory proteins, gntR family ILR76_00385 PF05962 HutD ILR76_00390 PF17391 Urocanase N-terminal domain ILR76_00390 PF17392 Urocanase C-terminal domain ILR76_00390 PF01175 Urocanase Rossmann-like domain ILR76_00395 PF00221 Aromatic amino acid lyase ILR76_00400 PF00324 Amino acid permease ILR76_00405 PF01979 Amidohydrolase family ILR76_00410 PF00491 Arginase family ILR76_00425 PF01177 Asp/Glu/Hydantoin racemase ILR76_00435 PF02086 D12 class N6 adenine-specific DNA methyltransferase ILR76_00450 PF15978 Tn7-like transposition protein D ILR76_00450 PF06527 TniQ ILR76_00455 PF13401 AAA domain ILR76_00455 PF11426 Tn7 transposition regulator TnsC ILR76_00460 PF00665 Integrase core domain ILR76_00465 PF08721 TnsA endonuclease C terminal ILR76_00465 PF08722 TnsA endonuclease N terminal ILR76_00470 PF01380 SIS domain ILR76_00475 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_00475 PF14602 Hexapeptide repeat of succinyl-transferase ILR76_00475 PF12804 MobA-like NTP transferase domain ILR76_00480 PF04608 Phosphatidylglycerophosphatase A ILR76_00485 PF00586 AIR synthase related protein, N-terminal domain ILR76_00485 PF02769 AIR synthase related protein, C-terminal domain ILR76_00490 PF01029 NusB family ILR76_00495 PF00885 6,7-dimethyl-8-ribityllumazine synthase ILR76_00500 PF00925 GTP cyclohydrolase II ILR76_00500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILR76_00525 PF02580 D-Tyr-tRNA(Tyr) deacylase ILR76_00530 PF00199 Catalase ILR76_00530 PF06628 Catalase-related immune-responsive ILR76_00540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILR76_00540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ILR76_00545 PF00581 Rhodanese-like domain ILR76_00550 PF02666 Phosphatidylserine decarboxylase ILR76_00555 PF03069 Acetamidase/Formamidase family ILR76_00560 PF01547 Bacterial extracellular solute-binding protein ILR76_00570 PF00989 PAS fold ILR76_00570 PF00512 His Kinase A (phospho-acceptor) domain ILR76_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_00570 PF11808 Phosphate regulon sensor protein PhoR ILR76_00575 PF00072 Response regulator receiver domain ILR76_00575 PF00486 Transcriptional regulatory protein, C terminal ILR76_00585 PF00106 short chain dehydrogenase ILR76_00590 PF01554 MatE ILR76_00595 PF00155 Aminotransferase class I and II ILR76_00600 PF04286 Protein of unknown function (DUF445) ILR76_00615 PF04262 Glutamate-cysteine ligase ILR76_00620 PF02600 Disulfide bond formation protein DsbB ILR76_00630 PF13936 Helix-turn-helix domain ILR76_00630 PF00665 Integrase core domain ILR76_00645 PF04650 YSIRK type signal peptide ILR76_00645 PF03373 Octapeptide repeat ILR76_00645 PF01476 LysM domain ILR76_00645 PF00746 LPXTG cell wall anchor motif ILR76_00645 PF02216 B domain ILR76_00655 PF13817 IS66 C-terminal element ILR76_00655 PF13007 Transposase C of IS166 homeodomain ILR76_00655 PF13005 zinc-finger binding domain of transposase IS66 ILR76_00655 PF03050 Transposase IS66 family ILR76_00675 PF05728 Uncharacterised protein family (UPF0227) ILR76_00680 PF00204 DNA gyrase B ILR76_00680 PF00986 DNA gyrase B subunit, carboxyl terminus ILR76_00680 PF01751 Toprim domain ILR76_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_00685 PF00106 short chain dehydrogenase ILR76_00690 PF04115 Ureidoglycolate lyase ILR76_00695 PF03561 Allantoicase repeat ILR76_00700 PF01494 FAD binding domain ILR76_00710 PF00860 Permease family ILR76_00715 PF00576 HIUase/Transthyretin family ILR76_00745 PF11412 Disulphide bond corrector protein DsbC ILR76_00745 PF02683 Cytochrome C biogenesis protein transmembrane region ILR76_00750 PF07694 5TMR of 5TMR-LYT ILR76_00750 PF00990 Diguanylate cyclase, GGDEF domain ILR76_00755 PF07859 alpha/beta hydrolase fold ILR76_00765 PF03960 ArsC family ILR76_00770 PF03372 Endonuclease/Exonuclease/phosphatase family ILR76_00775 PF00156 Phosphoribosyl transferase domain ILR76_00790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ILR76_00790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ILR76_00795 PF03033 Glycosyltransferase family 28 N-terminal domain ILR76_00795 PF04101 Glycosyltransferase family 28 C-terminal domain ILR76_00800 PF01225 Mur ligase family, catalytic domain ILR76_00800 PF02875 Mur ligase family, glutamate ligase domain ILR76_00800 PF08245 Mur ligase middle domain ILR76_00805 PF01820 D-ala D-ala ligase N-terminus ILR76_00805 PF07478 D-ala D-ala ligase C-terminus ILR76_00810 PF03799 Cell division protein FtsQ ILR76_00810 PF08478 POTRA domain, FtsQ-type ILR76_00815 PF02491 SHS2 domain inserted in FTSA ILR76_00820 PF00091 Tubulin/FtsZ family, GTPase domain ILR76_00820 PF12327 FtsZ family, C-terminal domain ILR76_00825 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ILR76_00835 PF01551 Peptidase family M23 ILR76_00840 PF17831 Pyruvate dehydrogenase E1 component middle domain ILR76_00840 PF00456 Transketolase, thiamine diphosphate binding domain ILR76_00845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR76_00845 PF00364 Biotin-requiring enzyme ILR76_00845 PF02817 e3 binding domain ILR76_00855 PF01169 Uncharacterized protein family UPF0016 ILR76_00860 PF07715 TonB-dependent Receptor Plug Domain ILR76_00860 PF00593 TonB dependent receptor ILR76_00865 PF01613 Flavin reductase like domain ILR76_00865 PF00258 Flavodoxin ILR76_00870 PF03692 Putative zinc- or iron-chelating domain ILR76_00875 PF00571 CBS domain ILR76_00875 PF00478 IMP dehydrogenase / GMP reductase domain ILR76_00880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR76_00880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR76_00880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR76_00880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR76_00885 PF01243 Pyridoxamine 5'-phosphate oxidase ILR76_00885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ILR76_00890 PF17768 RecJ OB domain ILR76_00890 PF02272 DHHA1 domain ILR76_00890 PF01368 DHH family ILR76_00910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_00915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ILR76_00920 PF04452 RNA methyltransferase ILR76_00925 PF00924 Mechanosensitive ion channel ILR76_00935 PF00501 AMP-binding enzyme ILR76_00935 PF16177 Acetyl-coenzyme A synthetase N-terminus ILR76_00935 PF13193 AMP-binding enzyme C-terminal domain ILR76_00940 PF00857 Isochorismatase family ILR76_00945 PF01037 Lrp/AsnC ligand binding domain ILR76_00950 PF00296 Luciferase-like monooxygenase ILR76_00955 PF03358 NADPH-dependent FMN reductase ILR76_00960 PF00196 Bacterial regulatory proteins, luxR family ILR76_00960 PF00072 Response regulator receiver domain ILR76_00970 PF01627 Hpt domain ILR76_00970 PF00672 HAMP domain ILR76_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_00970 PF00512 His Kinase A (phospho-acceptor) domain ILR76_00970 PF00072 Response regulator receiver domain ILR76_00975 PF04341 Protein of unknown function, DUF485 ILR76_00980 PF00474 Sodium:solute symporter family ILR76_00990 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_01000 PF00990 Diguanylate cyclase, GGDEF domain ILR76_01010 PF17755 UvrA DNA-binding domain ILR76_01010 PF00005 ABC transporter ILR76_01010 PF17760 UvrA interaction domain ILR76_01015 PF00440 Bacterial regulatory proteins, tetR family ILR76_01015 PF16925 Tetracyclin repressor-like, C-terminal domain ILR76_01030 PF06942 GlpM protein ILR76_01035 PF08543 Phosphomethylpyrimidine kinase ILR76_01035 PF03070 TENA/THI-4/PQQC family ILR76_01035 PF02581 Thiamine monophosphate synthase ILR76_01045 PF07690 Major Facilitator Superfamily ILR76_01050 PF00436 Single-strand binding protein family ILR76_01060 PF03591 AzlC protein ILR76_01070 PF00324 Amino acid permease ILR76_01075 PF00155 Aminotransferase class I and II ILR76_01075 PF00392 Bacterial regulatory proteins, gntR family ILR76_01080 PF00202 Aminotransferase class-III ILR76_01085 PF00171 Aldehyde dehydrogenase family ILR76_01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_01095 PF00857 Isochorismatase family ILR76_01100 PF02678 Pirin ILR76_01100 PF05726 Pirin C-terminal cupin domain ILR76_01110 PF13005 zinc-finger binding domain of transposase IS66 ILR76_01110 PF03050 Transposase IS66 family ILR76_01110 PF13817 IS66 C-terminal element ILR76_01110 PF13007 Transposase C of IS166 homeodomain ILR76_01145 PF07690 Major Facilitator Superfamily ILR76_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_01150 PF03466 LysR substrate binding domain ILR76_01170 PF00248 Aldo/keto reductase family ILR76_01175 PF12833 Helix-turn-helix domain ILR76_01175 PF02311 AraC-like ligand binding domain ILR76_01205 PF01638 HxlR-like helix-turn-helix ILR76_01210 PF02525 Flavodoxin-like fold ILR76_01230 PF02705 K+ potassium transporter ILR76_01255 PF00230 Major intrinsic protein ILR76_01270 PF00977 Histidine biosynthesis protein ILR76_01275 PF01636 Phosphotransferase enzyme family ILR76_01290 PF03992 Antibiotic biosynthesis monooxygenase ILR76_01305 PF00977 Histidine biosynthesis protein ILR76_01320 PF00117 Glutamine amidotransferase class-I ILR76_01325 PF00475 Imidazoleglycerol-phosphate dehydratase ILR76_01345 PF00583 Acetyltransferase (GNAT) family ILR76_01350 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ILR76_01350 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ILR76_01360 PF00672 HAMP domain ILR76_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_01360 PF00512 His Kinase A (phospho-acceptor) domain ILR76_01365 PF00072 Response regulator receiver domain ILR76_01365 PF00486 Transcriptional regulatory protein, C terminal ILR76_01370 PF17674 HHH domain ILR76_01370 PF00575 S1 RNA binding domain ILR76_01370 PF09371 Tex-like protein N-terminal domain ILR76_01370 PF16921 Tex protein YqgF-like domain ILR76_01375 PF01740 STAS domain ILR76_01375 PF00916 Sulfate permease family ILR76_01380 PF00106 short chain dehydrogenase ILR76_01385 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR76_01390 PF00005 ABC transporter ILR76_01390 PF12848 ABC transporter ILR76_01415 PF04191 Phospholipid methyltransferase ILR76_01435 PF00529 HlyD membrane-fusion protein of T1SS ILR76_01435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_01440 PF00873 AcrB/AcrD/AcrF family ILR76_01445 PF01545 Cation efflux family ILR76_01475 PF00324 Amino acid permease ILR76_01490 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR76_01505 PF01795 MraW methylase family ILR76_01515 PF00905 Penicillin binding protein transpeptidase domain ILR76_01515 PF03717 Penicillin-binding Protein dimerisation domain ILR76_01520 PF02875 Mur ligase family, glutamate ligase domain ILR76_01520 PF01225 Mur ligase family, catalytic domain ILR76_01520 PF08245 Mur ligase middle domain ILR76_01525 PF02875 Mur ligase family, glutamate ligase domain ILR76_01525 PF08245 Mur ligase middle domain ILR76_01525 PF01225 Mur ligase family, catalytic domain ILR76_01530 PF00953 Glycosyl transferase family 4 ILR76_01540 PF13847 Methyltransferase domain ILR76_01545 PF17092 Penicillin-binding protein OB-like domain ILR76_01545 PF00912 Transglycosylase ILR76_01545 PF00905 Penicillin binding protein transpeptidase domain ILR76_01550 PF11104 Type IV pilus assembly protein PilM; ILR76_01555 PF05137 Fimbrial assembly protein (PilN) ILR76_01560 PF04350 Pilus assembly protein, PilO ILR76_01570 PF11741 AMIN domain ILR76_01570 PF00263 Bacterial type II and III secretion system protein ILR76_01570 PF03958 Bacterial type II/III secretion system short domain ILR76_01570 PF07660 Secretin and TonB N terminus short domain ILR76_01575 PF01202 Shikimate kinase ILR76_01580 PF01761 3-dehydroquinate synthase ILR76_01590 PF00310 Glutamine amidotransferases class-II ILR76_01590 PF04898 Glutamate synthase central domain ILR76_01590 PF01645 Conserved region in glutamate synthase ILR76_01590 PF01493 GXGXG motif ILR76_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_01595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILR76_01605 PF04011 LemA family ILR76_01610 PF04536 TPM domain ILR76_01620 PF07963 Prokaryotic N-terminal methylation motif ILR76_01620 PF00114 Pilin (bacterial filament) ILR76_01625 PF13737 Transposase DDE domain ILR76_01630 PF15864 Protein glycosylation ligase ILR76_01630 PF04932 O-Antigen ligase ILR76_01630 PF11846 Virulence factor membrane-bound polymerase, C-terminal ILR76_01635 PF00210 Ferritin-like domain ILR76_01640 PF04324 BFD-like [2Fe-2S] binding domain ILR76_01645 PF01042 Endoribonuclease L-PSP ILR76_01650 PF13291 ACT domain ILR76_01650 PF04607 Region found in RelA / SpoT proteins ILR76_01650 PF02824 TGS domain ILR76_01660 PF01192 RNA polymerase Rpb6 ILR76_01665 PF00625 Guanylate kinase ILR76_01670 PF02401 LytB protein ILR76_01710 PF00886 Ribosomal protein S16 ILR76_01715 PF05239 PRC-barrel domain ILR76_01715 PF01782 RimM N-terminal domain ILR76_01720 PF01746 tRNA (Guanine-1)-methyltransferase ILR76_01725 PF01245 Ribosomal protein L19 ILR76_01730 PF00561 alpha/beta hydrolase fold ILR76_01735 PF03280 Proteobacterial lipase chaperone protein ILR76_01740 PF16198 tRNA pseudouridylate synthase B C-terminal domain ILR76_01740 PF01509 TruB family pseudouridylate synthase (N terminal domain) ILR76_01740 PF09157 Pseudouridine synthase II TruB, C-terminal ILR76_01745 PF01925 Sulfite exporter TauE/SafE ILR76_01755 PF00892 EamA-like transporter family ILR76_01760 PF00892 EamA-like transporter family ILR76_01765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR76_01765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR76_01770 PF02913 FAD linked oxidases, C-terminal domain ILR76_01770 PF01565 FAD binding domain ILR76_01780 PF03992 Antibiotic biosynthesis monooxygenase ILR76_01785 PF13936 Helix-turn-helix domain ILR76_01785 PF00665 Integrase core domain ILR76_01790 PF02525 Flavodoxin-like fold ILR76_01800 PF07690 Major Facilitator Superfamily ILR76_01805 PF12805 FUSC-like inner membrane protein yccS ILR76_01810 PF00080 Copper/zinc superoxide dismutase (SODC) ILR76_01815 PF01594 AI-2E family transporter ILR76_01820 PF13614 AAA domain ILR76_01840 PF08241 Methyltransferase domain ILR76_01855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILR76_01855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILR76_01860 PF00202 Aminotransferase class-III ILR76_01865 PF04958 Arginine N-succinyltransferase beta subunit ILR76_01870 PF00171 Aldehyde dehydrogenase family ILR76_01875 PF04996 Succinylarginine dihydrolase ILR76_01880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ILR76_01895 PF05922 Peptidase inhibitor I9 ILR76_01895 PF00082 Subtilase family ILR76_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_01910 PF03466 LysR substrate binding domain ILR76_01915 PF00892 EamA-like transporter family ILR76_01930 PF05746 DALR anticodon binding domain ILR76_01930 PF02092 Glycyl-tRNA synthetase beta subunit ILR76_01935 PF02091 Glycyl-tRNA synthetase alpha subunit ILR76_01965 PF04024 PspC domain ILR76_01975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_01975 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR76_01975 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_01975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_01985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILR76_01985 PF01488 Shikimate / quinate 5-dehydrogenase ILR76_01985 PF08501 Shikimate dehydrogenase substrate binding domain ILR76_01990 PF01218 Coproporphyrinogen III oxidase ILR76_01995 PF00925 GTP cyclohydrolase II ILR76_02000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ILR76_02000 PF02779 Transketolase, pyrimidine binding domain ILR76_02000 PF02780 Transketolase, C-terminal domain ILR76_02005 PF00459 Inositol monophosphatase family ILR76_02010 PF00271 Helicase conserved C-terminal domain ILR76_02010 PF12343 Cold shock protein DEAD box A ILR76_02010 PF03880 DbpA RNA binding domain ILR76_02010 PF00270 DEAD/DEAH box helicase ILR76_02020 PF00005 ABC transporter ILR76_02025 PF02405 Permease MlaE ILR76_02035 PF05494 MlaC protein ILR76_02045 PF01544 CorA-like Mg2+ transporter protein ILR76_02050 PF03641 Possible lysine decarboxylase ILR76_02055 PF00293 NUDIX domain ILR76_02060 PF00156 Phosphoribosyl transferase domain ILR76_02065 PF17191 RecG wedge domain ILR76_02065 PF00271 Helicase conserved C-terminal domain ILR76_02065 PF00270 DEAD/DEAH box helicase ILR76_02080 PF01553 Acyltransferase ILR76_02090 PF00375 Sodium:dicarboxylate symporter family ILR76_02100 PF01926 50S ribosome-binding GTPase ILR76_02105 PF02082 Transcriptional regulator ILR76_02110 PF00175 Oxidoreductase NAD-binding domain ILR76_02110 PF00042 Globin ILR76_02110 PF00970 Oxidoreductase FAD-binding domain ILR76_02115 PF05872 Bacterial protein of unknown function (DUF853) ILR76_02120 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR76_02125 PF00117 Glutamine amidotransferase class-I ILR76_02130 PF00338 Ribosomal protein S10p/S20e ILR76_02135 PF00297 Ribosomal protein L3 ILR76_02140 PF00573 Ribosomal protein L4/L1 family ILR76_02145 PF00276 Ribosomal protein L23 ILR76_02150 PF00181 Ribosomal Proteins L2, RNA binding domain ILR76_02150 PF03947 Ribosomal Proteins L2, C-terminal domain ILR76_02155 PF00203 Ribosomal protein S19 ILR76_02160 PF00237 Ribosomal protein L22p/L17e ILR76_02165 PF07650 KH domain ILR76_02165 PF00189 Ribosomal protein S3, C-terminal domain ILR76_02170 PF00252 Ribosomal protein L16p/L10e ILR76_02175 PF00831 Ribosomal L29 protein ILR76_02180 PF00366 Ribosomal protein S17 ILR76_02185 PF00238 Ribosomal protein L14p/L23e ILR76_02190 PF00467 KOW motif ILR76_02190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ILR76_02195 PF00281 Ribosomal protein L5 ILR76_02195 PF00673 ribosomal L5P family C-terminus ILR76_02200 PF00253 Ribosomal protein S14p/S29e ILR76_02205 PF00410 Ribosomal protein S8 ILR76_02210 PF00347 Ribosomal protein L6 ILR76_02215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ILR76_02220 PF00333 Ribosomal protein S5, N-terminal domain ILR76_02220 PF03719 Ribosomal protein S5, C-terminal domain ILR76_02225 PF00327 Ribosomal protein L30p/L7e ILR76_02230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ILR76_02235 PF00344 SecY translocase ILR76_02240 PF00444 Ribosomal protein L36 ILR76_02245 PF00416 Ribosomal protein S13/S18 ILR76_02250 PF00411 Ribosomal protein S11 ILR76_02255 PF01479 S4 domain ILR76_02255 PF00163 Ribosomal protein S4/S9 N-terminal domain ILR76_02260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ILR76_02260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ILR76_02260 PF01000 RNA polymerase Rpb3/RpoA insert domain ILR76_02265 PF01196 Ribosomal protein L17 ILR76_02270 PF00743 Flavin-binding monooxygenase-like ILR76_02275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_02275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_02275 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_02280 PF03937 Flavinator of succinate dehydrogenase ILR76_02310 PF09526 Probable metal-binding protein (DUF2387) ILR76_02315 PF01432 Peptidase family M3 ILR76_02320 PF00575 S1 RNA binding domain ILR76_02320 PF00773 RNB domain ILR76_02320 PF08206 Ribonuclease B OB domain ILR76_02320 PF08461 Ribonuclease R winged-helix domain ILR76_02320 PF17876 Cold shock domain ILR76_02365 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR76_02370 PF12833 Helix-turn-helix domain ILR76_02375 PF00892 EamA-like transporter family ILR76_02380 PF03631 Virulence factor BrkB ILR76_02385 PF03358 NADPH-dependent FMN reductase ILR76_02410 PF02130 Uncharacterized protein family UPF0054 ILR76_02415 PF02562 PhoH-like protein ILR76_02420 PF01938 TRAM domain ILR76_02420 PF00919 Uncharacterized protein family UPF0004 ILR76_02420 PF04055 Radical SAM superfamily ILR76_02425 PF01464 Transglycosylase SLT domain ILR76_02425 PF10145 Phage-related minor tail protein ILR76_02425 PF01551 Peptidase family M23 ILR76_02435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ILR76_02435 PF00056 lactate/malate dehydrogenase, NAD binding domain ILR76_02455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ILR76_02460 PF01066 CDP-alcohol phosphatidyltransferase ILR76_02505 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_02510 PF00440 Bacterial regulatory proteins, tetR family ILR76_02510 PF17932 Tetracyclin repressor-like, C-terminal domain ILR76_02525 PF01039 Carboxyl transferase domain ILR76_02530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_02530 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_02540 PF02785 Biotin carboxylase C-terminal domain ILR76_02540 PF00364 Biotin-requiring enzyme ILR76_02540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR76_02540 PF00289 Biotin carboxylase, N-terminal domain ILR76_02550 PF04386 Stringent starvation protein B ILR76_02555 PF00043 Glutathione S-transferase, C-terminal domain ILR76_02555 PF13417 Glutathione S-transferase, N-terminal domain ILR76_02560 PF00380 Ribosomal protein S9/S16 ILR76_02565 PF00572 Ribosomal protein L13 ILR76_02570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ILR76_02575 PF00398 Ribosomal RNA adenine dimethylase ILR76_02580 PF00149 Calcineurin-like phosphoesterase ILR76_02600 PF16360 GTP-binding GTPase Middle Region ILR76_02600 PF13167 GTP-binding GTPase N-terminal ILR76_02600 PF01926 50S ribosome-binding GTPase ILR76_02610 PF13091 PLD-like domain ILR76_02615 PF00149 Calcineurin-like phosphoesterase ILR76_02615 PF10518 TAT (twin-arginine translocation) pathway signal sequence ILR76_02620 PF00691 OmpA family ILR76_02620 PF01389 OmpA-like transmembrane domain ILR76_02630 PF17152 Periplasmic sensor domain ILR76_02630 PF00990 Diguanylate cyclase, GGDEF domain ILR76_02665 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_02665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR76_02675 PF04273 Putative phosphatase (DUF442) ILR76_02675 PF00753 Metallo-beta-lactamase superfamily ILR76_02680 PF00561 alpha/beta hydrolase fold ILR76_02685 PF00085 Thioredoxin ILR76_02690 PF03061 Thioesterase superfamily ILR76_02700 PF04461 Protein of unknown function (DUF520) ILR76_02710 PF01266 FAD dependent oxidoreductase ILR76_02710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ILR76_02720 PF03795 YCII-related domain ILR76_02725 PF04279 Intracellular septation protein A ILR76_02730 PF02811 PHP domain ILR76_02735 PF01062 Bestrophin, RFP-TM, chloride channel ILR76_02740 PF04002 RadC-like JAB domain ILR76_02745 PF02441 Flavoprotein ILR76_02745 PF04127 DNA / pantothenate metabolism flavoprotein ILR76_02750 PF07549 SecD/SecF GG Motif ILR76_02750 PF02355 Protein export membrane protein ILR76_02755 PF07549 SecD/SecF GG Motif ILR76_02755 PF13721 SecD export protein N-terminal TM region ILR76_02755 PF02355 Protein export membrane protein ILR76_02760 PF02699 Preprotein translocase subunit ILR76_02765 PF01702 Queuine tRNA-ribosyltransferase ILR76_02780 PF02547 Queuosine biosynthesis protein ILR76_02790 PF07689 KaiB domain ILR76_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_02790 PF00512 His Kinase A (phospho-acceptor) domain ILR76_02795 PF08335 GlnD PII-uridylyltransferase ILR76_02795 PF03710 Glutamate-ammonia ligase adenylyltransferase ILR76_02800 PF01063 Amino-transferase class IV ILR76_02815 PF01522 Polysaccharide deacetylase ILR76_02820 PF00535 Glycosyl transferase family 2 ILR76_02825 PF00534 Glycosyl transferases group 1 ILR76_02825 PF13439 Glycosyltransferase Family 4 ILR76_02850 PF13737 Transposase DDE domain ILR76_02865 PF00152 tRNA synthetases class II (D, K and N) ILR76_02865 PF01336 OB-fold nucleic acid binding domain ILR76_02865 PF02938 GAD domain ILR76_02875 PF00593 TonB dependent receptor ILR76_02875 PF07715 TonB-dependent Receptor Plug Domain ILR76_02895 PF06146 Phosphate-starvation-inducible E ILR76_02900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_02900 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_02900 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR76_02900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_02905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_02905 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_02905 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR76_02905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_02915 PF00672 HAMP domain ILR76_02915 PF00512 His Kinase A (phospho-acceptor) domain ILR76_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_02920 PF00072 Response regulator receiver domain ILR76_02920 PF00486 Transcriptional regulatory protein, C terminal ILR76_02925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ILR76_02940 PF03009 Glycerophosphoryl diester phosphodiesterase family ILR76_02945 PF01923 Cobalamin adenosyltransferase ILR76_02950 PF00593 TonB dependent receptor ILR76_02950 PF07715 TonB-dependent Receptor Plug Domain ILR76_02955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ILR76_02960 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_02985 PF00290 Tryptophan synthase alpha chain ILR76_02990 PF01039 Carboxyl transferase domain ILR76_02995 PF08245 Mur ligase middle domain ILR76_02995 PF02875 Mur ligase family, glutamate ligase domain ILR76_03010 PF00753 Metallo-beta-lactamase superfamily ILR76_03015 PF00578 AhpC/TSA family ILR76_03015 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILR76_03020 PF01043 SecA preprotein cross-linking domain ILR76_03020 PF07516 SecA Wing and Scaffold domain ILR76_03020 PF02810 SEC-C motif ILR76_03020 PF07517 SecA DEAD-like domain ILR76_03030 PF07690 Major Facilitator Superfamily ILR76_03030 PF00083 Sugar (and other) transporter ILR76_03035 PF03006 Haemolysin-III related ILR76_03060 PF00378 Enoyl-CoA hydratase/isomerase ILR76_03060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR76_03060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR76_03065 PF00108 Thiolase, N-terminal domain ILR76_03065 PF02803 Thiolase, C-terminal domain ILR76_03070 PF02311 AraC-like ligand binding domain ILR76_03070 PF12833 Helix-turn-helix domain ILR76_03075 PF02515 CoA-transferase family III ILR76_03080 PF04966 Carbohydrate-selective porin, OprB family ILR76_03085 PF01011 PQQ enzyme repeat ILR76_03090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR76_03090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR76_03100 PF00893 Small Multidrug Resistance protein ILR76_03110 PF02803 Thiolase, C-terminal domain ILR76_03110 PF00108 Thiolase, N-terminal domain ILR76_03120 PF13505 Outer membrane protein beta-barrel domain ILR76_03120 PF00691 OmpA family ILR76_03130 PF01139 tRNA-splicing ligase RtcB ILR76_03145 PF00324 Amino acid permease ILR76_03150 PF05175 Methyltransferase small domain ILR76_03150 PF08468 Methyltransferase small domain N-terminal ILR76_03155 PF00860 Permease family ILR76_03160 PF00009 Elongation factor Tu GTP binding domain ILR76_03160 PF00679 Elongation factor G C-terminus ILR76_03160 PF03144 Elongation factor Tu domain 2 ILR76_03165 PF01741 Large-conductance mechanosensitive channel, MscL ILR76_03180 PF06827 Zinc finger found in FPG and IleRS ILR76_03180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILR76_03180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILR76_03185 PF02245 Methylpurine-DNA glycosylase (MPG) ILR76_03195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_03210 PF10411 Disulfide bond isomerase protein N-terminus ILR76_03210 PF13098 Thioredoxin-like domain ILR76_03215 PF01571 Aminomethyltransferase folate-binding domain ILR76_03225 PF04343 Protein of unknown function, DUF488 ILR76_03230 PF03831 PhnA domain ILR76_03230 PF08274 PhnA Zinc-Ribbon ILR76_03235 PF07411 Domain of unknown function (DUF1508) ILR76_03240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR76_03240 PF04073 Aminoacyl-tRNA editing domain ILR76_03240 PF03129 Anticodon binding domain ILR76_03245 PF00873 AcrB/AcrD/AcrF family ILR76_03260 PF00072 Response regulator receiver domain ILR76_03265 PF00072 Response regulator receiver domain ILR76_03270 PF01584 CheW-like domain ILR76_03275 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILR76_03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILR76_03280 PF01627 Hpt domain ILR76_03280 PF00072 Response regulator receiver domain ILR76_03280 PF01584 CheW-like domain ILR76_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_03290 PF07687 Peptidase dimerisation domain ILR76_03290 PF01546 Peptidase family M20/M25/M40 ILR76_03295 PF08085 Entericidin EcnA/B family ILR76_03305 PF04304 Protein of unknown function (DUF454) ILR76_03310 PF17969 L,D-transpeptidase C-terminal domain ILR76_03310 PF03734 L,D-transpeptidase catalytic domain ILR76_03350 PF00175 Oxidoreductase NAD-binding domain ILR76_03350 PF00667 FAD binding domain ILR76_03350 PF00258 Flavodoxin ILR76_03360 PF12805 FUSC-like inner membrane protein yccS ILR76_03365 PF07690 Major Facilitator Superfamily ILR76_03370 PF00881 Nitroreductase family ILR76_03385 PF01235 Sodium:alanine symporter family ILR76_03390 PF01734 Patatin-like phospholipase ILR76_03395 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_03395 PF13291 ACT domain ILR76_03400 PF05992 SbmA/BacA-like family ILR76_03430 PF02637 GatB domain ILR76_03430 PF02934 GatB/GatE catalytic domain ILR76_03435 PF01425 Amidase ILR76_03440 PF02686 Glu-tRNAGln amidotransferase C subunit ILR76_03450 PF04085 rod shape-determining protein MreC ILR76_03455 PF04093 rod shape-determining protein MreD ILR76_03460 PF02545 Maf-like protein ILR76_03465 PF10150 Ribonuclease E/G family ILR76_03465 PF00575 S1 RNA binding domain ILR76_03475 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ILR76_03475 PF06974 Protein of unknown function (DUF1298) ILR76_03480 PF01507 Phosphoadenosine phosphosulfate reductase family ILR76_03495 PF02525 Flavodoxin-like fold ILR76_03515 PF02673 Bacitracin resistance protein BacA ILR76_03520 PF06719 AraC-type transcriptional regulator N-terminus ILR76_03520 PF12833 Helix-turn-helix domain ILR76_03525 PF00698 Acyl transferase domain ILR76_03525 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_03525 PF08990 Erythronolide synthase docking ILR76_03525 PF09277 Erythronolide synthase, docking ILR76_03525 PF16197 Ketoacyl-synthetase C-terminal extension ILR76_03525 PF14765 Polyketide synthase dehydratase ILR76_03525 PF00550 Phosphopantetheine attachment site ILR76_03525 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_03525 PF08659 KR domain ILR76_03525 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_03530 PF01965 DJ-1/PfpI family ILR76_03540 PF00324 Amino acid permease ILR76_03545 PF04303 PrpF protein ILR76_03550 PF00348 Polyprenyl synthetase ILR76_03555 PF04237 YjbR ILR76_03560 PF01145 SPFH domain / Band 7 family ILR76_03570 PF01734 Patatin-like phospholipase ILR76_03590 PF08019 Phosphoethanolamine transferase EptA/EptB ILR76_03590 PF00884 Sulfatase ILR76_03595 PF00486 Transcriptional regulatory protein, C terminal ILR76_03595 PF00072 Response regulator receiver domain ILR76_03600 PF00512 His Kinase A (phospho-acceptor) domain ILR76_03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_03600 PF08521 Two-component sensor kinase N-terminal ILR76_03610 PF00909 Ammonium Transporter Family ILR76_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_03615 PF03466 LysR substrate binding domain ILR76_03635 PF08264 Anticodon-binding domain of tRNA ILR76_03635 PF00133 tRNA synthetases class I (I, L, M and V) ILR76_03635 PF10458 Valyl tRNA synthetase tRNA binding arm ILR76_03655 PF01906 Putative heavy-metal-binding ILR76_03660 PF01906 Putative heavy-metal-binding ILR76_03665 PF02321 Outer membrane efflux protein ILR76_03670 PF00873 AcrB/AcrD/AcrF family ILR76_03675 PF00529 HlyD membrane-fusion protein of T1SS ILR76_03675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_03680 PF01569 PAP2 superfamily ILR76_03690 PF00348 Polyprenyl synthetase ILR76_03700 PF00829 Ribosomal prokaryotic L21 protein ILR76_03705 PF01016 Ribosomal L27 protein ILR76_03710 PF03548 Outer membrane lipoprotein carrier protein LolA ILR76_03720 PF02403 Seryl-tRNA synthetase N-terminal domain ILR76_03720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR76_03725 PF10414 Sirohaem synthase dimerisation region ILR76_03725 PF14824 Sirohaem biosynthesis protein central ILR76_03725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILR76_03730 PF00588 SpoU rRNA Methylase family ILR76_03735 PF01638 HxlR-like helix-turn-helix ILR76_03740 PF03358 NADPH-dependent FMN reductase ILR76_03745 PF13520 Amino acid permease ILR76_03750 PF00465 Iron-containing alcohol dehydrogenase ILR76_03760 PF03099 Biotin/lipoate A/B protein ligase family ILR76_03765 PF04359 Protein of unknown function (DUF493) ILR76_03770 PF04546 Sigma-70, non-essential region ILR76_03770 PF03979 Sigma-70 factor, region 1.1 ILR76_03770 PF00140 Sigma-70 factor, region 1.2 ILR76_03770 PF04542 Sigma-70 region 2 ILR76_03770 PF04539 Sigma-70 region 3 ILR76_03770 PF04545 Sigma-70, region 4 ILR76_03790 PF00581 Rhodanese-like domain ILR76_03790 PF17773 UPF0176 acylphosphatase like domain ILR76_03800 PF00285 Citrate synthase, C-terminal domain ILR76_03805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILR76_03810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILR76_03815 PF02910 Fumarate reductase flavoprotein C-term ILR76_03815 PF00890 FAD binding domain ILR76_03820 PF13085 2Fe-2S iron-sulfur cluster binding domain ILR76_03835 PF16870 2-oxoglutarate dehydrogenase C-terminal ILR76_03835 PF16078 2-oxoglutarate dehydrogenase N-terminus ILR76_03835 PF00676 Dehydrogenase E1 component ILR76_03835 PF02779 Transketolase, pyrimidine binding domain ILR76_03840 PF02817 e3 binding domain ILR76_03840 PF00364 Biotin-requiring enzyme ILR76_03840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR76_03845 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_03845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR76_03850 PF08442 ATP-grasp domain ILR76_03850 PF00549 CoA-ligase ILR76_03855 PF02629 CoA binding domain ILR76_03855 PF00549 CoA-ligase ILR76_03860 PF00579 tRNA synthetases class I (W and Y) ILR76_03865 PF05661 Protein of unknown function (DUF808) ILR76_03870 PF04228 Putative neutral zinc metallopeptidase ILR76_03875 PF00999 Sodium/hydrogen exchanger family ILR76_03890 PF09587 Bacterial capsule synthesis protein PGA_cap ILR76_03900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR76_03905 PF00582 Universal stress protein family ILR76_03910 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_03915 PF01272 Transcription elongation factor, GreA/GreB, C-term ILR76_03915 PF03449 Transcription elongation factor, N-terminal ILR76_03920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR76_03920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ILR76_03920 PF02142 MGS-like domain ILR76_03925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ILR76_03925 PF00117 Glutamine amidotransferase class-I ILR76_03940 PF01985 CRS1 / YhbY (CRM) domain ILR76_03945 PF01728 FtsJ-like methyltransferase ILR76_03950 PF01434 Peptidase family M41 ILR76_03950 PF06480 FtsH Extracellular ILR76_03950 PF17862 AAA+ lid domain ILR76_03950 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_03955 PF00809 Pterin binding enzyme ILR76_03980 PF09423 PhoD-like phosphatase ILR76_03980 PF16655 PhoD-like phosphatase, N-terminal domain ILR76_03995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ILR76_03995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ILR76_04010 PF00083 Sugar (and other) transporter ILR76_04015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILR76_04015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILR76_04020 PF01266 FAD dependent oxidoreductase ILR76_04020 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ILR76_04025 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ILR76_04025 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ILR76_04030 PF00781 Diacylglycerol kinase catalytic domain ILR76_04035 PF00149 Calcineurin-like phosphoesterase ILR76_04045 PF00166 Chaperonin 10 Kd subunit ILR76_04050 PF00118 TCP-1/cpn60 chaperonin family ILR76_04055 PF01219 Prokaryotic diacylglycerol kinase ILR76_04060 PF00753 Metallo-beta-lactamase superfamily ILR76_04065 PF03009 Glycerophosphoryl diester phosphodiesterase family ILR76_04070 PF00873 AcrB/AcrD/AcrF family ILR76_04080 PF01435 Peptidase family M48 ILR76_04085 PF01464 Transglycosylase SLT domain ILR76_04090 PF01171 PP-loop family ILR76_04100 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR76_04100 PF01464 Transglycosylase SLT domain ILR76_04105 PF01272 Transcription elongation factor, GreA/GreB, C-term ILR76_04105 PF03449 Transcription elongation factor, N-terminal ILR76_04120 PF00501 AMP-binding enzyme ILR76_04120 PF13193 AMP-binding enzyme C-terminal domain ILR76_04120 PF00668 Condensation domain ILR76_04120 PF00550 Phosphopantetheine attachment site ILR76_04120 PF00975 Thioesterase domain ILR76_04130 PF13737 Transposase DDE domain ILR76_04155 PF00881 Nitroreductase family ILR76_04170 PF02595 Glycerate kinase family ILR76_04175 PF00384 Molybdopterin oxidoreductase ILR76_04180 PF02634 FdhD/NarQ family ILR76_04185 PF06803 Protein of unknown function (DUF1232) ILR76_04190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR76_04190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR76_04190 PF11890 Domain of unknown function (DUF3410) ILR76_04195 PF00152 tRNA synthetases class II (D, K and N) ILR76_04205 PF18073 Rubredoxin metal binding domain ILR76_04210 PF00324 Amino acid permease ILR76_04220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILR76_04220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ILR76_04225 PF01678 Diaminopimelate epimerase ILR76_04230 PF01810 LysE type translocator ILR76_04235 PF00589 Phage integrase family ILR76_04235 PF02899 Phage integrase, N-terminal SAM-like domain ILR76_04240 PF01012 Electron transfer flavoprotein domain ILR76_04245 PF01012 Electron transfer flavoprotein domain ILR76_04245 PF00766 Electron transfer flavoprotein FAD-binding domain ILR76_04250 PF03989 DNA gyrase C-terminal domain, beta-propeller ILR76_04250 PF00521 DNA gyrase/topoisomerase IV, subunit A ILR76_04270 PF00665 Integrase core domain ILR76_04270 PF13936 Helix-turn-helix domain ILR76_04290 PF13533 Biotin-lipoyl like ILR76_04300 PF00266 Aminotransferase class-V ILR76_04315 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ILR76_04325 PF02687 FtsX-like permease family ILR76_04325 PF12704 MacB-like periplasmic core domain ILR76_04330 PF00005 ABC transporter ILR76_04335 PF03772 Competence protein ILR76_04335 PF13567 Domain of unknown function (DUF4131) ILR76_04335 PF00753 Metallo-beta-lactamase superfamily ILR76_04345 PF06965 Na+/H+ antiporter 1 ILR76_04345 PF01343 Peptidase family S49 ILR76_04350 PF12697 Alpha/beta hydrolase family ILR76_04355 PF00551 Formyl transferase ILR76_04360 PF00586 AIR synthase related protein, N-terminal domain ILR76_04360 PF02769 AIR synthase related protein, C-terminal domain ILR76_04365 PF01594 AI-2E family transporter ILR76_04370 PF08299 Bacterial dnaA protein helix-turn-helix ILR76_04370 PF00308 Bacterial dnaA protein ILR76_04370 PF11638 DnaA N-terminal domain ILR76_04410 PF00588 SpoU rRNA Methylase family ILR76_04410 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILR76_04415 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ILR76_04425 PF00691 OmpA family ILR76_04430 PF07676 WD40-like Beta Propeller Repeat ILR76_04430 PF04052 TolB amino-terminal domain ILR76_04440 PF02472 Biopolymer transport protein ExbD/TolR ILR76_04445 PF01618 MotA/TolQ/ExbB proton channel family ILR76_04450 PF03061 Thioesterase superfamily ILR76_04455 PF07687 Peptidase dimerisation domain ILR76_04455 PF01546 Peptidase family M20/M25/M40 ILR76_04460 PF17864 RuvB AAA lid domain ILR76_04460 PF05496 Holliday junction DNA helicase RuvB P-loop domain ILR76_04460 PF05491 RuvB C-terminal winged helix domain ILR76_04465 PF01330 RuvA N terminal domain ILR76_04465 PF07499 RuvA, C-terminal domain ILR76_04470 PF01966 HD domain ILR76_04475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ILR76_04475 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ILR76_04475 PF02769 AIR synthase related protein, C-terminal domain ILR76_04480 PF07690 Major Facilitator Superfamily ILR76_04485 PF01784 NIF3 (NGG1p interacting factor 3) ILR76_04490 PF00378 Enoyl-CoA hydratase/isomerase ILR76_04495 PF01467 Cytidylyltransferase-like ILR76_04495 PF00293 NUDIX domain ILR76_04505 PF00578 AhpC/TSA family ILR76_04520 PF06508 Queuosine biosynthesis protein QueC ILR76_04530 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_04530 PF14602 Hexapeptide repeat of succinyl-transferase ILR76_04530 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ILR76_04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_04540 PF03466 LysR substrate binding domain ILR76_04545 PF00005 ABC transporter ILR76_04545 PF12857 TOBE-like domain ILR76_04550 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_04555 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_04570 PF01063 Amino-transferase class IV ILR76_04575 PF02618 YceG-like family ILR76_04580 PF02223 Thymidylate kinase ILR76_04590 PF00890 FAD binding domain ILR76_04590 PF02910 Fumarate reductase flavoprotein C-term ILR76_04595 PF13180 PDZ domain ILR76_04605 PF03144 Elongation factor Tu domain 2 ILR76_04605 PF06421 GTP-binding protein LepA C-terminus ILR76_04605 PF00679 Elongation factor G C-terminus ILR76_04605 PF00009 Elongation factor Tu GTP binding domain ILR76_04610 PF10502 Signal peptidase, peptidase S26 ILR76_04620 PF00035 Double-stranded RNA binding motif ILR76_04620 PF14622 Ribonuclease-III-like ILR76_04625 PF07650 KH domain ILR76_04625 PF01926 50S ribosome-binding GTPase ILR76_04635 PF02565 Recombination protein O C terminal ILR76_04635 PF11967 Recombination protein O N terminal ILR76_04640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ILR76_04645 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ILR76_04650 PF00106 short chain dehydrogenase ILR76_04680 PF00155 Aminotransferase class I and II ILR76_04690 PF00990 Diguanylate cyclase, GGDEF domain ILR76_04690 PF17151 Periplasmic sensor domain ILR76_04700 PF04851 Type III restriction enzyme, res subunit ILR76_04700 PF02151 UvrB/uvrC motif ILR76_04700 PF12344 Ultra-violet resistance protein B ILR76_04700 PF17757 UvrB interaction domain ILR76_04700 PF00271 Helicase conserved C-terminal domain ILR76_04710 PF00892 EamA-like transporter family ILR76_04715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILR76_04715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILR76_04730 PF01018 GTP1/OBG ILR76_04730 PF01926 50S ribosome-binding GTPase ILR76_04735 PF00696 Amino acid kinase family ILR76_04735 PF01472 PUA domain ILR76_04745 PF07759 Protein of unknown function (DUF1615) ILR76_04750 PF01207 Dihydrouridine synthase (Dus) ILR76_04755 PF03060 Nitronate monooxygenase ILR76_04800 PF03441 FAD binding domain of DNA photolyase ILR76_04800 PF00875 DNA photolyase ILR76_04805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_04810 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_04815 PF00768 D-alanyl-D-alanine carboxypeptidase ILR76_04815 PF07943 Penicillin-binding protein 5, C-terminal domain ILR76_04825 PF03971 Monomeric isocitrate dehydrogenase ILR76_04830 PF00849 RNA pseudouridylate synthase ILR76_04835 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR76_04855 PF06779 Uncharacterised MFS-type transporter YbfB ILR76_04860 PF03466 LysR substrate binding domain ILR76_04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_04865 PF00375 Sodium:dicarboxylate symporter family ILR76_04870 PF02567 Phenazine biosynthesis-like protein ILR76_04875 PF00675 Insulinase (Peptidase family M16) ILR76_04875 PF05193 Peptidase M16 inactive domain ILR76_04895 PF13610 DDE domain ILR76_04910 PF00892 EamA-like transporter family ILR76_04920 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ILR76_04925 PF00083 Sugar (and other) transporter ILR76_04930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILR76_04930 PF13378 Enolase C-terminal domain-like ILR76_04935 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_04935 PF00698 Acyl transferase domain ILR76_04935 PF16197 Ketoacyl-synthetase C-terminal extension ILR76_04935 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_04935 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_04935 PF08659 KR domain ILR76_04935 PF00550 Phosphopantetheine attachment site ILR76_04935 PF14765 Polyketide synthase dehydratase ILR76_04935 PF08990 Erythronolide synthase docking ILR76_04935 PF09277 Erythronolide synthase, docking ILR76_04940 PF00440 Bacterial regulatory proteins, tetR family ILR76_04960 PF02678 Pirin ILR76_04960 PF17954 Quercetinase C-terminal cupin domain ILR76_04970 PF13309 HTH domain ILR76_04970 PF08348 YheO-like PAS domain ILR76_04980 PF00550 Phosphopantetheine attachment site ILR76_04980 PF00668 Condensation domain ILR76_04980 PF13193 AMP-binding enzyme C-terminal domain ILR76_04980 PF00501 AMP-binding enzyme ILR76_04985 PF00975 Thioesterase domain ILR76_04985 PF13193 AMP-binding enzyme C-terminal domain ILR76_04985 PF00501 AMP-binding enzyme ILR76_04985 PF00668 Condensation domain ILR76_04985 PF00550 Phosphopantetheine attachment site ILR76_04990 PF01032 FecCD transport family ILR76_04995 PF01032 FecCD transport family ILR76_05000 PF00005 ABC transporter ILR76_05005 PF01497 Periplasmic binding protein ILR76_05010 PF07715 TonB-dependent Receptor Plug Domain ILR76_05010 PF00593 TonB dependent receptor ILR76_05020 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ILR76_05025 PF00550 Phosphopantetheine attachment site ILR76_05025 PF00501 AMP-binding enzyme ILR76_05025 PF00668 Condensation domain ILR76_05030 PF00501 AMP-binding enzyme ILR76_05030 PF13193 AMP-binding enzyme C-terminal domain ILR76_05035 PF00857 Isochorismatase family ILR76_05035 PF00550 Phosphopantetheine attachment site ILR76_05040 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILR76_05045 PF00005 ABC transporter ILR76_05050 PF00005 ABC transporter ILR76_05055 PF00975 Thioesterase domain ILR76_05065 PF00425 chorismate binding enzyme ILR76_05075 PF01208 Uroporphyrinogen decarboxylase (URO-D) ILR76_05080 PF05675 Protein of unknown function (DUF817) ILR76_05095 PF00144 Beta-lactamase ILR76_05105 PF01227 GTP cyclohydrolase I ILR76_05110 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_05110 PF01799 [2Fe-2S] binding domain ILR76_05115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILR76_05115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILR76_05130 PF00218 Indole-3-glycerol phosphate synthase ILR76_05135 PF00591 Glycosyl transferase family, a/b domain ILR76_05135 PF02885 Glycosyl transferase family, helical bundle domain ILR76_05140 PF00593 TonB dependent receptor ILR76_05140 PF07715 TonB-dependent Receptor Plug Domain ILR76_05145 PF11838 ERAP1-like C-terminal domain ILR76_05145 PF01433 Peptidase family M1 domain ILR76_05150 PF00117 Glutamine amidotransferase class-I ILR76_05160 PF00854 POT family ILR76_05165 PF03951 Glutamine synthetase, beta-Grasp domain ILR76_05165 PF00120 Glutamine synthetase, catalytic domain ILR76_05170 PF04345 Chorismate lyase ILR76_05175 PF01040 UbiA prenyltransferase family ILR76_05210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILR76_05210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILR76_05215 PF01784 NIF3 (NGG1p interacting factor 3) ILR76_05220 PF13180 PDZ domain ILR76_05225 PF01743 Poly A polymerase head domain ILR76_05225 PF12627 Probable RNA and SrmB- binding site of polymerase A ILR76_05230 PF00390 Malic enzyme, N-terminal domain ILR76_05230 PF03949 Malic enzyme, NAD binding domain ILR76_05230 PF01515 Phosphate acetyl/butaryl transferase ILR76_05235 PF00990 Diguanylate cyclase, GGDEF domain ILR76_05235 PF03707 Bacterial signalling protein N terminal repeat ILR76_05235 PF00563 EAL domain ILR76_05240 PF04452 RNA methyltransferase ILR76_05245 PF02219 Methylenetetrahydrofolate reductase ILR76_05250 PF05221 S-adenosyl-L-homocysteine hydrolase ILR76_05250 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ILR76_05265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_05265 PF09317 Domain of unknown function (DUF1974) ILR76_05265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_05270 PF04055 Radical SAM superfamily ILR76_05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_05275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR76_05285 PF07690 Major Facilitator Superfamily ILR76_05295 PF00557 Metallopeptidase family M24 ILR76_05300 PF00318 Ribosomal protein S2 ILR76_05305 PF00889 Elongation factor TS ILR76_05315 PF12833 Helix-turn-helix domain ILR76_05335 PF03330 Lytic transglycolase ILR76_05335 PF05036 Sporulation related domain ILR76_05340 PF13406 Transglycosylase SLT domain ILR76_05345 PF01098 Cell cycle protein ILR76_05355 PF14489 QueF-like protein ILR76_05355 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ILR76_05360 PF01061 ABC-2 type transporter ILR76_05365 PF00005 ABC transporter ILR76_05395 PF00464 Serine hydroxymethyltransferase ILR76_05400 PF02321 Outer membrane efflux protein ILR76_05405 PF00873 AcrB/AcrD/AcrF family ILR76_05410 PF13533 Biotin-lipoyl like ILR76_05415 PF03466 LysR substrate binding domain ILR76_05415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR76_05425 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_05430 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_05435 PF00005 ABC transporter ILR76_05440 PF00893 Small Multidrug Resistance protein ILR76_05445 PF00037 4Fe-4S binding domain ILR76_05450 PF01136 Peptidase family U32 ILR76_05450 PF16325 Peptidase family U32 C-terminal domain ILR76_05455 PF00392 Bacterial regulatory proteins, gntR family ILR76_05455 PF00155 Aminotransferase class I and II ILR76_05460 PF02567 Phenazine biosynthesis-like protein ILR76_05465 PF00175 Oxidoreductase NAD-binding domain ILR76_05465 PF00970 Oxidoreductase FAD-binding domain ILR76_05470 PF01980 tRNA-methyltransferase O ILR76_05470 PF18389 TrmO C-terminal domain ILR76_05480 PF00437 Type II/IV secretion system protein ILR76_05480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILR76_05490 PF00072 Response regulator receiver domain ILR76_05490 PF00486 Transcriptional regulatory protein, C terminal ILR76_05495 PF08521 Two-component sensor kinase N-terminal ILR76_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_05495 PF00512 His Kinase A (phospho-acceptor) domain ILR76_05505 PF00293 NUDIX domain ILR76_05515 PF00912 Transglycosylase ILR76_05515 PF14814 Bifunctional transglycosylase second domain ILR76_05515 PF00905 Penicillin binding protein transpeptidase domain ILR76_05520 PF01513 ATP-NAD kinase ILR76_05525 PF07023 Protein of unknown function (DUF1315) ILR76_05530 PF02885 Glycosyl transferase family, helical bundle domain ILR76_05530 PF00591 Glycosyl transferase family, a/b domain ILR76_05535 PF00375 Sodium:dicarboxylate symporter family ILR76_05540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_05540 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_05540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_05545 PF00756 Putative esterase ILR76_05550 PF01842 ACT domain ILR76_05550 PF01817 Chorismate mutase type II ILR76_05550 PF00800 Prephenate dehydratase ILR76_05555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILR76_05565 PF07687 Peptidase dimerisation domain ILR76_05565 PF01546 Peptidase family M20/M25/M40 ILR76_05570 PF12706 Beta-lactamase superfamily domain ILR76_05580 PF03883 Peroxide stress protein YaaA ILR76_05590 PF05690 Thiazole biosynthesis protein ThiG ILR76_05600 PF04241 Protein of unknown function (DUF423) ILR76_05605 PF00140 Sigma-70 factor, region 1.2 ILR76_05605 PF04542 Sigma-70 region 2 ILR76_05605 PF04545 Sigma-70, region 4 ILR76_05615 PF00313 'Cold-shock' DNA-binding domain ILR76_05620 PF00271 Helicase conserved C-terminal domain ILR76_05620 PF00270 DEAD/DEAH box helicase ILR76_05630 PF00881 Nitroreductase family ILR76_05635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ILR76_05635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ILR76_05655 PF01180 Dihydroorotate dehydrogenase ILR76_05660 PF02674 Colicin V production protein ILR76_05665 PF00156 Phosphoribosyl transferase domain ILR76_05680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR76_05680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR76_05685 PF01435 Peptidase family M48 ILR76_05690 PF09424 Yqey-like protein ILR76_05695 PF01165 Ribosomal protein S21 ILR76_05700 PF00814 Glycoprotease family ILR76_05720 PF00069 Protein kinase domain ILR76_05745 PF03466 LysR substrate binding domain ILR76_05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_05750 PF00202 Aminotransferase class-III ILR76_05755 PF00171 Aldehyde dehydrogenase family ILR76_05760 PF00324 Amino acid permease ILR76_05790 PF04076 Bacterial OB fold (BOF) protein ILR76_05805 PF13737 Transposase DDE domain ILR76_05820 PF00561 alpha/beta hydrolase fold ILR76_05825 PF03616 Sodium/glutamate symporter ILR76_05835 PF07729 FCD domain ILR76_05835 PF00392 Bacterial regulatory proteins, gntR family ILR76_05850 PF13737 Transposase DDE domain ILR76_05885 PF08946 Osmosensory transporter coiled coil ILR76_05885 PF00083 Sugar (and other) transporter ILR76_05905 PF00155 Aminotransferase class I and II ILR76_05910 PF06826 Predicted Permease Membrane Region ILR76_05910 PF02080 TrkA-C domain ILR76_05920 PF04403 Paraquat-inducible protein A ILR76_05925 PF02470 MlaD protein ILR76_05935 PF01177 Asp/Glu/Hydantoin racemase ILR76_05940 PF00892 EamA-like transporter family ILR76_05945 PF07995 Glucose / Sorbosone dehydrogenase ILR76_05965 PF00375 Sodium:dicarboxylate symporter family ILR76_05975 PF16123 Hydroxyacylglutathione hydrolase C-terminus ILR76_05975 PF00753 Metallo-beta-lactamase superfamily ILR76_05980 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_05985 PF09383 NIL domain ILR76_05985 PF00005 ABC transporter ILR76_05990 PF03180 NLPA lipoprotein ILR76_05995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ILR76_05995 PF02843 Phosphoribosylglycinamide synthetase, C domain ILR76_05995 PF02844 Phosphoribosylglycinamide synthetase, N domain ILR76_06000 PF01808 AICARFT/IMPCHase bienzyme ILR76_06000 PF02142 MGS-like domain ILR76_06005 PF02954 Bacterial regulatory protein, Fis family ILR76_06025 PF13932 GidA associated domain ILR76_06025 PF01134 Glucose inhibited division protein A ILR76_06035 PF14403 Circularly permuted ATP-grasp type 2 ILR76_06045 PF08379 Bacterial transglutaminase-like N-terminal region ILR76_06045 PF01841 Transglutaminase-like superfamily ILR76_06055 PF00842 Alanine racemase, C-terminal domain ILR76_06055 PF01168 Alanine racemase, N-terminal domain ILR76_06060 PF00772 DnaB-like helicase N terminal domain ILR76_06060 PF03796 DnaB-like helicase C terminal domain ILR76_06065 PF01281 Ribosomal protein L9, N-terminal domain ILR76_06065 PF03948 Ribosomal protein L9, C-terminal domain ILR76_06070 PF01084 Ribosomal protein S18 ILR76_06075 PF01250 Ribosomal protein S6 ILR76_06080 PF01040 UbiA prenyltransferase family ILR76_06085 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ILR76_06090 PF00510 Cytochrome c oxidase subunit III ILR76_06095 PF00115 Cytochrome C and Quinol oxidase polypeptide I ILR76_06100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ILR76_06100 PF06481 COX Aromatic Rich Motif ILR76_06110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ILR76_06110 PF00391 PEP-utilising enzyme, mobile domain ILR76_06110 PF02896 PEP-utilising enzyme, TIM barrel domain ILR76_06115 PF03618 Kinase/pyrophosphorylase ILR76_06125 PF14883 Hypothetical glycosyl hydrolase family 13 ILR76_06125 PF01522 Polysaccharide deacetylase ILR76_06130 PF00535 Glycosyl transferase family 2 ILR76_06135 PF13994 PgaD-like protein ILR76_06145 PF00296 Luciferase-like monooxygenase ILR76_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_06160 PF03466 LysR substrate binding domain ILR76_06170 PF03462 PCRF domain ILR76_06170 PF00472 RF-1 domain ILR76_06175 PF17827 PrmC N-terminal domain ILR76_06175 PF13847 Methyltransferase domain ILR76_06180 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_06185 PF09084 NMT1/THI5 like ILR76_06190 PF12833 Helix-turn-helix domain ILR76_06195 PF00106 short chain dehydrogenase ILR76_06200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_06200 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_06200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_06205 PF13193 AMP-binding enzyme C-terminal domain ILR76_06205 PF00501 AMP-binding enzyme ILR76_06210 PF01613 Flavin reductase like domain ILR76_06215 PF00899 ThiF family ILR76_06220 PF03109 ABC1 family ILR76_06235 PF03814 Potassium-transporting ATPase A subunit ILR76_06245 PF02669 K+-transporting ATPase, c chain ILR76_06250 PF13493 Domain of unknown function (DUF4118) ILR76_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_06250 PF00512 His Kinase A (phospho-acceptor) domain ILR76_06250 PF02702 Osmosensitive K+ channel His kinase sensor domain ILR76_06255 PF00072 Response regulator receiver domain ILR76_06255 PF00486 Transcriptional regulatory protein, C terminal ILR76_06260 PF00120 Glutamine synthetase, catalytic domain ILR76_06270 PF03232 Ubiquinone biosynthesis protein COQ7 ILR76_06275 PF07690 Major Facilitator Superfamily ILR76_06280 PF07244 Surface antigen variable number repeat ILR76_06280 PF17243 POTRA domain TamA domain 1 ILR76_06280 PF01103 Surface antigen ILR76_06295 PF00330 Aconitase family (aconitate hydratase) ILR76_06295 PF11791 Aconitate B N-terminal domain ILR76_06295 PF06434 Aconitate hydratase 2 N-terminus ILR76_06305 PF00520 Ion transport protein ILR76_06305 PF00027 Cyclic nucleotide-binding domain ILR76_06310 PF07690 Major Facilitator Superfamily ILR76_06325 PF03466 LysR substrate binding domain ILR76_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_06330 PF04284 Protein of unknown function (DUF441) ILR76_06340 PF00849 RNA pseudouridylate synthase ILR76_06340 PF01479 S4 domain ILR76_06355 PF00849 RNA pseudouridylate synthase ILR76_06355 PF01479 S4 domain ILR76_06360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ILR76_06365 PF01119 DNA mismatch repair protein, C-terminal domain ILR76_06365 PF08676 MutL C terminal dimerisation domain ILR76_06375 PF17209 Hfq protein ILR76_06385 PF00881 Nitroreductase family ILR76_06395 PF00149 Calcineurin-like phosphoesterase ILR76_06400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILR76_06405 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR76_06405 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ILR76_06420 PF02540 NAD synthase ILR76_06420 PF00958 GMP synthase C terminal domain ILR76_06420 PF00117 Glutamine amidotransferase class-I ILR76_06425 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ILR76_06430 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ILR76_06435 PF13520 Amino acid permease ILR76_06440 PF00171 Aldehyde dehydrogenase family ILR76_06455 PF00465 Iron-containing alcohol dehydrogenase ILR76_06460 PF14493 Helix-turn-helix domain ILR76_06460 PF05970 PIF1-like helicase ILR76_06470 PF06445 GyrI-like small molecule binding domain ILR76_06475 PF02110 Hydroxyethylthiazole kinase family ILR76_06485 PF00665 Integrase core domain ILR76_06485 PF13936 Helix-turn-helix domain ILR76_06495 PF01433 Peptidase family M1 domain ILR76_06495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ILR76_06495 PF11940 Domain of unknown function (DUF3458) Ig-like fold ILR76_06505 PF00106 short chain dehydrogenase ILR76_06515 PF01817 Chorismate mutase type II ILR76_06520 PF01037 Lrp/AsnC ligand binding domain ILR76_06530 PF00440 Bacterial regulatory proteins, tetR family ILR76_06535 PF07715 TonB-dependent Receptor Plug Domain ILR76_06535 PF00593 TonB dependent receptor ILR76_06540 PF00924 Mechanosensitive ion channel ILR76_06565 PF13737 Transposase DDE domain ILR76_06580 PF07715 TonB-dependent Receptor Plug Domain ILR76_06580 PF00593 TonB dependent receptor ILR76_06600 PF00005 ABC transporter ILR76_06600 PF12848 ABC transporter ILR76_06605 PF00582 Universal stress protein family ILR76_06630 PF00689 Cation transporting ATPase, C-terminus ILR76_06630 PF00690 Cation transporter/ATPase, N-terminus ILR76_06635 PF02308 MgtC family ILR76_06640 PF03594 Benzoate membrane transport protein ILR76_06645 PF01037 Lrp/AsnC ligand binding domain ILR76_06650 PF01810 LysE type translocator ILR76_06655 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILR76_06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_06660 PF03466 LysR substrate binding domain ILR76_06670 PF02803 Thiolase, C-terminal domain ILR76_06670 PF00108 Thiolase, N-terminal domain ILR76_06680 PF01575 MaoC like domain ILR76_06685 PF00144 Beta-lactamase ILR76_06695 PF07690 Major Facilitator Superfamily ILR76_06700 PF12169 DNA polymerase III subunits gamma and tau domain III ILR76_06700 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ILR76_06700 PF12170 DNA polymerase III tau subunit V interacting with alpha ILR76_06705 PF05506 Domain of unknown function (DUF756) ILR76_06705 PF04185 Phosphoesterase family ILR76_06710 PF03061 Thioesterase superfamily ILR76_06715 PF00465 Iron-containing alcohol dehydrogenase ILR76_06725 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILR76_06730 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ILR76_06730 PF01565 FAD binding domain ILR76_06745 PF01645 Conserved region in glutamate synthase ILR76_06830 PF00145 C-5 cytosine-specific DNA methylase ILR76_06880 PF13936 Helix-turn-helix domain ILR76_06880 PF00665 Integrase core domain ILR76_06940 PF03050 Transposase IS66 family ILR76_06940 PF13817 IS66 C-terminal element ILR76_06940 PF13007 Transposase C of IS166 homeodomain ILR76_06940 PF13005 zinc-finger binding domain of transposase IS66 ILR76_07015 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ILR76_07025 PF13737 Transposase DDE domain ILR76_07030 PF00884 Sulfatase ILR76_07030 PF08019 Phosphoethanolamine transferase EptA/EptB ILR76_07035 PF12832 MFS_1 like family ILR76_07045 PF02785 Biotin carboxylase C-terminal domain ILR76_07045 PF00289 Biotin carboxylase, N-terminal domain ILR76_07045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR76_07050 PF00364 Biotin-requiring enzyme ILR76_07055 PF01220 Dehydroquinase class II ILR76_07060 PF13438 Domain of unknown function (DUF4113) ILR76_07060 PF00817 impB/mucB/samB family ILR76_07060 PF11799 impB/mucB/samB family C-terminal domain ILR76_07070 PF00005 ABC transporter ILR76_07075 PF00072 Response regulator receiver domain ILR76_07075 PF00486 Transcriptional regulatory protein, C terminal ILR76_07085 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILR76_07085 PF04324 BFD-like [2Fe-2S] binding domain ILR76_07085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR76_07085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR76_07085 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_07085 PF13806 Rieske-like [2Fe-2S] domain ILR76_07090 PF04324 BFD-like [2Fe-2S] binding domain ILR76_07090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR76_07090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR76_07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_07090 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILR76_07095 PF04324 BFD-like [2Fe-2S] binding domain ILR76_07095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR76_07095 PF00384 Molybdopterin oxidoreductase ILR76_07095 PF01568 Molydopterin dinucleotide binding domain ILR76_07100 PF12804 MobA-like NTP transferase domain ILR76_07105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR76_07105 PF00384 Molybdopterin oxidoreductase ILR76_07105 PF01568 Molydopterin dinucleotide binding domain ILR76_07110 PF06463 Molybdenum Cofactor Synthesis C ILR76_07110 PF04055 Radical SAM superfamily ILR76_07120 PF02391 MoaE protein ILR76_07125 PF01967 MoaC family ILR76_07125 PF00994 Probable molybdopterin binding domain ILR76_07130 PF00994 Probable molybdopterin binding domain ILR76_07130 PF03454 MoeA C-terminal region (domain IV) ILR76_07130 PF03453 MoeA N-terminal region (domain I and II) ILR76_07135 PF01638 HxlR-like helix-turn-helix ILR76_07140 PF00155 Aminotransferase class I and II ILR76_07140 PF00392 Bacterial regulatory proteins, gntR family ILR76_07145 PF00892 EamA-like transporter family ILR76_07165 PF02635 DsrE/DsrF-like family ILR76_07170 PF16363 GDP-mannose 4,6 dehydratase ILR76_07175 PF10415 Fumarase C C-terminus ILR76_07175 PF00206 Lyase ILR76_07195 PF01266 FAD dependent oxidoreductase ILR76_07205 PF02542 YgbB family ILR76_07215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILR76_07215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILR76_07220 PF00440 Bacterial regulatory proteins, tetR family ILR76_07225 PF02954 Bacterial regulatory protein, Fis family ILR76_07225 PF00072 Response regulator receiver domain ILR76_07225 PF00158 Sigma-54 interaction domain ILR76_07230 PF00989 PAS fold ILR76_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_07230 PF00512 His Kinase A (phospho-acceptor) domain ILR76_07235 PF00919 Uncharacterized protein family UPF0004 ILR76_07235 PF18693 TRAM domain ILR76_07235 PF04055 Radical SAM superfamily ILR76_07240 PF00696 Amino acid kinase family ILR76_07245 PF01765 Ribosome recycling factor ILR76_07250 PF01255 Putative undecaprenyl diphosphate synthase ILR76_07260 PF13288 DXP reductoisomerase C-terminal domain ILR76_07260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ILR76_07260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ILR76_07265 PF02163 Peptidase family M50 ILR76_07265 PF17820 PDZ domain ILR76_07265 PF13180 PDZ domain ILR76_07270 PF01103 Surface antigen ILR76_07270 PF07244 Surface antigen variable number repeat ILR76_07280 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_07280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ILR76_07285 PF07977 FabA-like domain ILR76_07290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ILR76_07290 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_07305 PF02631 RecX family ILR76_07310 PF00154 recA bacterial DNA recombination protein ILR76_07315 PF01479 S4 domain ILR76_07320 PF13419 Haloacid dehalogenase-like hydrolase ILR76_07345 PF01037 Lrp/AsnC ligand binding domain ILR76_07350 PF00266 Aminotransferase class-V ILR76_07355 PF00324 Amino acid permease ILR76_07365 PF00082 Subtilase family ILR76_07365 PF05922 Peptidase inhibitor I9 ILR76_07370 PF00916 Sulfate permease family ILR76_07370 PF01740 STAS domain ILR76_07375 PF02586 SOS response associated peptidase (SRAP) ILR76_07380 PF07995 Glucose / Sorbosone dehydrogenase ILR76_07390 PF00563 EAL domain ILR76_07390 PF03707 Bacterial signalling protein N terminal repeat ILR76_07390 PF00990 Diguanylate cyclase, GGDEF domain ILR76_07410 PF02378 Phosphotransferase system, EIIC ILR76_07410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILR76_07415 PF00294 pfkB family carbohydrate kinase ILR76_07420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILR76_07420 PF00381 PTS HPr component phosphorylation site ILR76_07420 PF02896 PEP-utilising enzyme, TIM barrel domain ILR76_07420 PF00391 PEP-utilising enzyme, mobile domain ILR76_07420 PF05524 PEP-utilising enzyme, N-terminal ILR76_07445 PF05525 Branched-chain amino acid transport protein ILR76_07450 PF00557 Metallopeptidase family M24 ILR76_07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_07455 PF03466 LysR substrate binding domain ILR76_07465 PF00462 Glutaredoxin ILR76_07470 PF00202 Aminotransferase class-III ILR76_07475 PF00478 IMP dehydrogenase / GMP reductase domain ILR76_07475 PF00571 CBS domain ILR76_07500 PF02881 SRP54-type protein, helical bundle domain ILR76_07500 PF00448 SRP54-type protein, GTPase domain ILR76_07510 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ILR76_07525 PF08173 Membrane bound YbgT-like protein ILR76_07530 PF02322 Cytochrome bd terminal oxidase subunit II ILR76_07535 PF01654 Cytochrome bd terminal oxidase subunit I ILR76_07545 PF13737 Transposase DDE domain ILR76_07550 PF13936 Helix-turn-helix domain ILR76_07550 PF00665 Integrase core domain ILR76_07555 PF07290 Protein of unknown function (DUF1449) ILR76_07565 PF00294 pfkB family carbohydrate kinase ILR76_07570 PF00593 TonB dependent receptor ILR76_07570 PF07715 TonB-dependent Receptor Plug Domain ILR76_07575 PF00675 Insulinase (Peptidase family M16) ILR76_07575 PF05193 Peptidase M16 inactive domain ILR76_07575 PF08367 Peptidase M16C associated ILR76_07580 PF02253 Phospholipase A1 ILR76_07585 PF02386 Cation transport protein ILR76_07590 PF02080 TrkA-C domain ILR76_07590 PF02254 TrkA-N domain ILR76_07595 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_07595 PF00585 C-terminal regulatory domain of Threonine dehydratase ILR76_07600 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ILR76_07615 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILR76_07615 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILR76_07625 PF02617 ATP-dependent Clp protease adaptor protein ClpS ILR76_07630 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_07630 PF07724 AAA domain (Cdc48 subfamily) ILR76_07630 PF17871 AAA lid domain ILR76_07630 PF02861 Clp amino terminal domain, pathogenicity island component ILR76_07630 PF10431 C-terminal, D2-small domain, of ClpB protein ILR76_07635 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ILR76_07640 PF00793 DAHP synthetase I family ILR76_07655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_07685 PF00117 Glutamine amidotransferase class-I ILR76_07685 PF06418 CTP synthase N-terminus ILR76_07690 PF00793 DAHP synthetase I family ILR76_07695 PF03952 Enolase, N-terminal domain ILR76_07695 PF00113 Enolase, C-terminal TIM barrel domain ILR76_07700 PF04239 Protein of unknown function (DUF421) ILR76_07705 PF04977 Septum formation initiator ILR76_07710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ILR76_07715 PF01144 Coenzyme A transferase ILR76_07720 PF01144 Coenzyme A transferase ILR76_07725 PF00108 Thiolase, N-terminal domain ILR76_07725 PF02803 Thiolase, C-terminal domain ILR76_07730 PF00206 Lyase ILR76_07730 PF10397 Adenylosuccinate lyase C-terminus ILR76_07735 PF00561 alpha/beta hydrolase fold ILR76_07740 PF07690 Major Facilitator Superfamily ILR76_07745 PF02627 Carboxymuconolactone decarboxylase family ILR76_07750 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ILR76_07750 PF00775 Dioxygenase ILR76_07755 PF00775 Dioxygenase ILR76_07760 PF01487 Type I 3-dehydroquinase ILR76_07765 PF05048 Periplasmic copper-binding protein (NosD) ILR76_07770 PF04966 Carbohydrate-selective porin, OprB family ILR76_07775 PF13360 PQQ-like domain ILR76_07775 PF01011 PQQ enzyme repeat ILR76_07785 PF04143 Sulphur transport ILR76_07795 PF00753 Metallo-beta-lactamase superfamily ILR76_07800 PF09339 IclR helix-turn-helix domain ILR76_07800 PF01614 Bacterial transcriptional regulator ILR76_07805 PF03466 LysR substrate binding domain ILR76_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_07810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_07810 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_07810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_07825 PF00106 short chain dehydrogenase ILR76_07835 PF07690 Major Facilitator Superfamily ILR76_07845 PF01425 Amidase ILR76_07850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR76_07865 PF00355 Rieske [2Fe-2S] domain ILR76_07865 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR76_07880 PF00175 Oxidoreductase NAD-binding domain ILR76_07880 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_07885 PF01613 Flavin reductase like domain ILR76_07890 PF12833 Helix-turn-helix domain ILR76_07890 PF02311 AraC-like ligand binding domain ILR76_07895 PF01179 Copper amine oxidase, enzyme domain ILR76_07895 PF02728 Copper amine oxidase, N3 domain ILR76_07895 PF02727 Copper amine oxidase, N2 domain ILR76_07895 PF07833 Copper amine oxidase N-terminal domain ILR76_07905 PF00171 Aldehyde dehydrogenase family ILR76_07910 PF01804 Penicillin amidase ILR76_07915 PF12146 Serine aminopeptidase, S33 ILR76_07920 PF00108 Thiolase, N-terminal domain ILR76_07920 PF02803 Thiolase, C-terminal domain ILR76_07925 PF01144 Coenzyme A transferase ILR76_07930 PF01144 Coenzyme A transferase ILR76_07935 PF00775 Dioxygenase ILR76_07935 PF04444 Catechol dioxygenase N terminus ILR76_07940 PF02426 Muconolactone delta-isomerase ILR76_07945 PF13378 Enolase C-terminal domain-like ILR76_07945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILR76_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_07950 PF03466 LysR substrate binding domain ILR76_07960 PF07729 FCD domain ILR76_07960 PF00392 Bacterial regulatory proteins, gntR family ILR76_07965 PF00920 Dehydratase family ILR76_07970 PF07690 Major Facilitator Superfamily ILR76_07980 PF00171 Aldehyde dehydrogenase family ILR76_08000 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_08000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_08000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_08010 PF00158 Sigma-54 interaction domain ILR76_08010 PF02954 Bacterial regulatory protein, Fis family ILR76_08010 PF06506 Propionate catabolism activator ILR76_08015 PF00501 AMP-binding enzyme ILR76_08015 PF13193 AMP-binding enzyme C-terminal domain ILR76_08020 PF04341 Protein of unknown function, DUF485 ILR76_08025 PF00474 Sodium:solute symporter family ILR76_08030 PF00107 Zinc-binding dehydrogenase ILR76_08030 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_08035 PF00171 Aldehyde dehydrogenase family ILR76_08045 PF00561 alpha/beta hydrolase fold ILR76_08050 PF00199 Catalase ILR76_08050 PF06628 Catalase-related immune-responsive ILR76_08065 PF07859 alpha/beta hydrolase fold ILR76_08070 PF01047 MarR family ILR76_08075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_08080 PF00106 short chain dehydrogenase ILR76_08085 PF01872 RibD C-terminal domain ILR76_08090 PF09278 MerR, DNA binding ILR76_08090 PF00376 MerR family regulatory protein ILR76_08100 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_08110 PF12706 Beta-lactamase superfamily domain ILR76_08115 PF00440 Bacterial regulatory proteins, tetR family ILR76_08115 PF08359 YsiA-like protein, C-terminal region ILR76_08120 PF13737 Transposase DDE domain ILR76_08130 PF00857 Isochorismatase family ILR76_08135 PF03466 LysR substrate binding domain ILR76_08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08140 PF07995 Glucose / Sorbosone dehydrogenase ILR76_08145 PF02254 TrkA-N domain ILR76_08145 PF00999 Sodium/hydrogen exchanger family ILR76_08155 PF01546 Peptidase family M20/M25/M40 ILR76_08155 PF07687 Peptidase dimerisation domain ILR76_08165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ILR76_08165 PF17287 POTRA domain ILR76_08165 PF08479 POTRA domain, ShlB-type ILR76_08175 PF00665 Integrase core domain ILR76_08175 PF13936 Helix-turn-helix domain ILR76_08195 PF07690 Major Facilitator Superfamily ILR76_08200 PF04909 Amidohydrolase ILR76_08210 PF07702 UTRA domain ILR76_08210 PF00392 Bacterial regulatory proteins, gntR family ILR76_08215 PF08450 SMP-30/Gluconolactonase/LRE-like region ILR76_08225 PF03466 LysR substrate binding domain ILR76_08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08245 PF07690 Major Facilitator Superfamily ILR76_08250 PF01842 ACT domain ILR76_08250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR76_08250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR76_08255 PF03737 Aldolase/RraA ILR76_08275 PF03050 Transposase IS66 family ILR76_08275 PF13817 IS66 C-terminal element ILR76_08275 PF13007 Transposase C of IS166 homeodomain ILR76_08275 PF13005 zinc-finger binding domain of transposase IS66 ILR76_08290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_08290 PF00529 HlyD membrane-fusion protein of T1SS ILR76_08305 PF00171 Aldehyde dehydrogenase family ILR76_08310 PF00920 Dehydratase family ILR76_08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08320 PF03466 LysR substrate binding domain ILR76_08325 PF01370 NAD dependent epimerase/dehydratase family ILR76_08330 PF07690 Major Facilitator Superfamily ILR76_08335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR76_08335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR76_08340 PF12833 Helix-turn-helix domain ILR76_08340 PF06719 AraC-type transcriptional regulator N-terminus ILR76_08355 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_08355 PF00107 Zinc-binding dehydrogenase ILR76_08365 PF01032 FecCD transport family ILR76_08370 PF00005 ABC transporter ILR76_08390 PF14572 Phosphoribosyl synthetase-associated domain ILR76_08390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILR76_08395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILR76_08465 PF00196 Bacterial regulatory proteins, luxR family ILR76_08470 PF01425 Amidase ILR76_08475 PF13533 Biotin-lipoyl like ILR76_08480 PF07690 Major Facilitator Superfamily ILR76_08505 PF01975 Survival protein SurE ILR76_08515 PF13291 ACT domain ILR76_08515 PF02824 TGS domain ILR76_08515 PF04607 Region found in RelA / SpoT proteins ILR76_08565 PF12146 Serine aminopeptidase, S33 ILR76_08570 PF02311 AraC-like ligand binding domain ILR76_08570 PF12833 Helix-turn-helix domain ILR76_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_08580 PF00672 HAMP domain ILR76_08580 PF00512 His Kinase A (phospho-acceptor) domain ILR76_08580 PF16527 Two-component sensor protein CpxA, periplasmic domain ILR76_08590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_08590 PF00529 HlyD membrane-fusion protein of T1SS ILR76_08595 PF00873 AcrB/AcrD/AcrF family ILR76_08600 PF02321 Outer membrane efflux protein ILR76_08605 PF12146 Serine aminopeptidase, S33 ILR76_08610 PF00743 Flavin-binding monooxygenase-like ILR76_08615 PF01593 Flavin containing amine oxidoreductase ILR76_08630 PF01266 FAD dependent oxidoreductase ILR76_08720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILR76_08720 PF02753 Pili assembly chaperone PapD, C-terminal domain ILR76_08725 PF13954 PapC N-terminal domain ILR76_08725 PF00577 Outer membrane usher protein ILR76_08725 PF13953 PapC C-terminal domain ILR76_08730 PF00419 Fimbrial protein ILR76_08740 PF00107 Zinc-binding dehydrogenase ILR76_08740 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_08750 PF00199 Catalase ILR76_08765 PF13091 PLD-like domain ILR76_08785 PF01244 Membrane dipeptidase (Peptidase family M19) ILR76_08790 PF04055 Radical SAM superfamily ILR76_08790 PF13186 Iron-sulfur cluster-binding domain ILR76_08795 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ILR76_08800 PF03070 TENA/THI-4/PQQC family ILR76_08805 PF12706 Beta-lactamase superfamily domain ILR76_08810 PF08042 PqqA family ILR76_08815 PF17941 Polyphosphate kinase C-terminal domain 1 ILR76_08815 PF13089 Polyphosphate kinase N-terminal domain ILR76_08815 PF13090 Polyphosphate kinase C-terminal domain 2 ILR76_08815 PF02503 Polyphosphate kinase middle domain ILR76_08820 PF00149 Calcineurin-like phosphoesterase ILR76_08830 PF00857 Isochorismatase family ILR76_08830 PF00550 Phosphopantetheine attachment site ILR76_08835 PF00106 short chain dehydrogenase ILR76_08840 PF00005 ABC transporter ILR76_08840 PF03459 TOBE domain ILR76_08845 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08855 PF03459 TOBE domain ILR76_08860 PF00355 Rieske [2Fe-2S] domain ILR76_08860 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR76_08865 PF00866 Ring hydroxylating beta subunit ILR76_08870 PF00970 Oxidoreductase FAD-binding domain ILR76_08870 PF00175 Oxidoreductase NAD-binding domain ILR76_08870 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_08890 PF00665 Integrase core domain ILR76_08890 PF13936 Helix-turn-helix domain ILR76_08910 PF01738 Dienelactone hydrolase family ILR76_08915 PF07690 Major Facilitator Superfamily ILR76_08920 PF12833 Helix-turn-helix domain ILR76_08920 PF06719 AraC-type transcriptional regulator N-terminus ILR76_08935 PF13737 Transposase DDE domain ILR76_08945 PF03466 LysR substrate binding domain ILR76_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08950 PF01144 Coenzyme A transferase ILR76_08955 PF01144 Coenzyme A transferase ILR76_08960 PF02667 Short chain fatty acid transporter ILR76_08965 PF02803 Thiolase, C-terminal domain ILR76_08965 PF00108 Thiolase, N-terminal domain ILR76_08970 PF03466 LysR substrate binding domain ILR76_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08975 PF03466 LysR substrate binding domain ILR76_08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_08990 PF00206 Lyase ILR76_08990 PF10415 Fumarase C C-terminus ILR76_08995 PF07715 TonB-dependent Receptor Plug Domain ILR76_08995 PF00593 TonB dependent receptor ILR76_09000 PF00083 Sugar (and other) transporter ILR76_09015 PF00005 ABC transporter ILR76_09020 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_09025 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILR76_09040 PF07702 UTRA domain ILR76_09040 PF00392 Bacterial regulatory proteins, gntR family ILR76_09050 PF02525 Flavodoxin-like fold ILR76_09055 PF01638 HxlR-like helix-turn-helix ILR76_09060 PF06445 GyrI-like small molecule binding domain ILR76_09060 PF12833 Helix-turn-helix domain ILR76_09075 PF01925 Sulfite exporter TauE/SafE ILR76_09080 PF00753 Metallo-beta-lactamase superfamily ILR76_09080 PF04273 Putative phosphatase (DUF442) ILR76_09085 PF04273 Putative phosphatase (DUF442) ILR76_09085 PF00753 Metallo-beta-lactamase superfamily ILR76_09090 PF00158 Sigma-54 interaction domain ILR76_09090 PF02954 Bacterial regulatory protein, Fis family ILR76_09090 PF00072 Response regulator receiver domain ILR76_09095 PF01062 Bestrophin, RFP-TM, chloride channel ILR76_09100 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_09100 PF00107 Zinc-binding dehydrogenase ILR76_09105 PF00106 short chain dehydrogenase ILR76_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_09110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR76_09115 PF00364 Biotin-requiring enzyme ILR76_09115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR76_09115 PF02817 e3 binding domain ILR76_09120 PF02779 Transketolase, pyrimidine binding domain ILR76_09120 PF02780 Transketolase, C-terminal domain ILR76_09125 PF00676 Dehydrogenase E1 component ILR76_09130 PF04055 Radical SAM superfamily ILR76_09150 PF01264 Chorismate synthase ILR76_09155 PF05175 Methyltransferase small domain ILR76_09160 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_09170 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_09170 PF17862 AAA+ lid domain ILR76_09170 PF01434 Peptidase family M41 ILR76_09180 PF05166 YcgL domain ILR76_09200 PF00570 HRDC domain ILR76_09200 PF01612 3'-5' exonuclease ILR76_09205 PF02132 RecR protein ILR76_09205 PF13662 Toprim domain ILR76_09210 PF02575 YbaB/EbfC DNA-binding family ILR76_09220 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR76_09225 PF00561 alpha/beta hydrolase fold ILR76_09230 PF08241 Methyltransferase domain ILR76_09260 PF01230 HIT domain ILR76_09295 PF00005 ABC transporter ILR76_09300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_09320 PF13005 zinc-finger binding domain of transposase IS66 ILR76_09320 PF03050 Transposase IS66 family ILR76_09320 PF13007 Transposase C of IS166 homeodomain ILR76_09320 PF13817 IS66 C-terminal element ILR76_09330 PF02684 Lipid-A-disaccharide synthetase ILR76_09335 PF07715 TonB-dependent Receptor Plug Domain ILR76_09335 PF00593 TonB dependent receptor ILR76_09355 PF01925 Sulfite exporter TauE/SafE ILR76_09360 PF00793 DAHP synthetase I family ILR76_09365 PF02654 Cobalamin-5-phosphate synthase ILR76_09380 PF02277 Phosphoribosyltransferase ILR76_09385 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ILR76_09395 PF13419 Haloacid dehalogenase-like hydrolase ILR76_09420 PF00593 TonB dependent receptor ILR76_09420 PF07715 TonB-dependent Receptor Plug Domain ILR76_09435 PF04183 IucA / IucC family ILR76_09435 PF06276 Ferric iron reductase FhuF-like transporter ILR76_09440 PF04183 IucA / IucC family ILR76_09440 PF06276 Ferric iron reductase FhuF-like transporter ILR76_09445 PF07690 Major Facilitator Superfamily ILR76_09450 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ILR76_09455 PF06276 Ferric iron reductase FhuF-like transporter ILR76_09455 PF04183 IucA / IucC family ILR76_09460 PF04073 Aminoacyl-tRNA editing domain ILR76_09470 PF03109 ABC1 family ILR76_09475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_09475 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_09475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_09480 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_09480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_09480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_09485 PF00487 Fatty acid desaturase ILR76_09490 PF12833 Helix-turn-helix domain ILR76_09490 PF12852 Cupin ILR76_09495 PF09312 SurA N-terminal domain ILR76_09495 PF00639 PPIC-type PPIASE domain ILR76_09500 PF00216 Bacterial DNA-binding protein ILR76_09515 PF02082 Transcriptional regulator ILR76_09520 PF00266 Aminotransferase class-V ILR76_09525 PF01592 NifU-like N terminal domain ILR76_09530 PF01521 Iron-sulphur cluster biosynthesis ILR76_09535 PF07743 HSCB C-terminal oligomerisation domain ILR76_09535 PF00226 DnaJ domain ILR76_09540 PF00012 Hsp70 protein ILR76_09545 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_09550 PF00211 Adenylate and Guanylate cyclase catalytic domain ILR76_09560 PF17757 UvrB interaction domain ILR76_09560 PF00271 Helicase conserved C-terminal domain ILR76_09560 PF02559 CarD-like/TRCF domain ILR76_09560 PF03461 TRCF domain ILR76_09560 PF00270 DEAD/DEAH box helicase ILR76_09580 PF03737 Aldolase/RraA ILR76_09585 PF13460 NAD(P)H-binding ILR76_09590 PF01649 Ribosomal protein S20 ILR76_09600 PF00459 Inositol monophosphatase family ILR76_09615 PF00005 ABC transporter ILR76_09615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILR76_09620 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_09625 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_09630 PF01432 Peptidase family M3 ILR76_09650 PF00593 TonB dependent receptor ILR76_09650 PF07715 TonB-dependent Receptor Plug Domain ILR76_09660 PF01618 MotA/TolQ/ExbB proton channel family ILR76_09665 PF02472 Biopolymer transport protein ExbD/TolR ILR76_09670 PF02472 Biopolymer transport protein ExbD/TolR ILR76_09680 PF01274 Malate synthase ILR76_09735 PF01464 Transglycosylase SLT domain ILR76_09735 PF10145 Phage-related minor tail protein ILR76_09735 PF01551 Peptidase family M23 ILR76_09795 PF04860 Phage portal protein ILR76_09880 PF00772 DnaB-like helicase N terminal domain ILR76_09880 PF03796 DnaB-like helicase C terminal domain ILR76_09940 PF02899 Phage integrase, N-terminal SAM-like domain ILR76_09940 PF00589 Phage integrase family ILR76_09945 PF03969 AFG1-like ATPase ILR76_09955 PF00743 Flavin-binding monooxygenase-like ILR76_09965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILR76_09975 PF00216 Bacterial DNA-binding protein ILR76_09980 PF00575 S1 RNA binding domain ILR76_09985 PF02224 Cytidylate kinase ILR76_09995 PF14437 MafB19-like deaminase ILR76_10005 PF03167 Uracil DNA glycosylase superfamily ILR76_10015 PF03934 Type II secretion system (T2SS), protein K ILR76_10020 PF11612 Type II secretion system (T2SS), protein J ILR76_10020 PF07963 Prokaryotic N-terminal methylation motif ILR76_10025 PF07963 Prokaryotic N-terminal methylation motif ILR76_10025 PF02501 Type II secretion system (T2SS), protein I ILR76_10040 PF01026 TatD related DNase ILR76_10050 PF09115 DNA polymerase III, delta subunit, C terminal ILR76_10055 PF02348 Cytidylyltransferase ILR76_10060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ILR76_10065 PF00664 ABC transporter transmembrane region ILR76_10065 PF00005 ABC transporter ILR76_10075 PF01618 MotA/TolQ/ExbB proton channel family ILR76_10080 PF17762 HTH domain found in ParB protein ILR76_10080 PF02195 ParB-like nuclease domain ILR76_10085 PF13614 AAA domain ILR76_10090 PF02527 rRNA small subunit methyltransferase G ILR76_10095 PF00483 Nucleotidyl transferase ILR76_10100 PF01636 Phosphotransferase enzyme family ILR76_10105 PF04453 LPS transport system D ILR76_10105 PF03968 OstA-like protein ILR76_10110 PF00639 PPIC-type PPIASE domain ILR76_10110 PF09312 SurA N-terminal domain ILR76_10115 PF01116 Fructose-bisphosphate aldolase class-II ILR76_10125 PF00162 Phosphoglycerate kinase ILR76_10135 PF02545 Maf-like protein ILR76_10140 PF08007 Cupin superfamily protein ILR76_10155 PF00375 Sodium:dicarboxylate symporter family ILR76_10160 PF06912 Protein of unknown function (DUF1275) ILR76_10165 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ILR76_10170 PF00664 ABC transporter transmembrane region ILR76_10170 PF00005 ABC transporter ILR76_10180 PF12833 Helix-turn-helix domain ILR76_10180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR76_10185 PF01597 Glycine cleavage H-protein ILR76_10190 PF02146 Sir2 family ILR76_10195 PF00474 Sodium:solute symporter family ILR76_10200 PF01037 Lrp/AsnC ligand binding domain ILR76_10205 PF00171 Aldehyde dehydrogenase family ILR76_10205 PF14850 DNA-binding domain of Proline dehydrogenase ILR76_10205 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ILR76_10205 PF01619 Proline dehydrogenase ILR76_10210 PF04229 GrpB protein ILR76_10215 PF05958 tRNA (Uracil-5-)-methyltransferase ILR76_10225 PF09992 Phosphodiester glycosidase ILR76_10235 PF04264 YceI-like domain ILR76_10245 PF02779 Transketolase, pyrimidine binding domain ILR76_10245 PF00456 Transketolase, thiamine diphosphate binding domain ILR76_10245 PF02780 Transketolase, C-terminal domain ILR76_10250 PF02773 S-adenosylmethionine synthetase, C-terminal domain ILR76_10250 PF02772 S-adenosylmethionine synthetase, central domain ILR76_10250 PF00438 S-adenosylmethionine synthetase, N-terminal domain ILR76_10275 PF00905 Penicillin binding protein transpeptidase domain ILR76_10290 PF02075 Crossover junction endodeoxyribonuclease RuvC ILR76_10295 PF03853 YjeF-related protein N-terminus ILR76_10295 PF01256 Carbohydrate kinase ILR76_10300 PF08331 Domain of unknown function (DUF1730) ILR76_10305 PF04055 Radical SAM superfamily ILR76_10305 PF06968 Biotin and Thiamin Synthesis associated domain ILR76_10320 PF16970 Type-1 fimbrial protein, A ILR76_10325 PF02753 Pili assembly chaperone PapD, C-terminal domain ILR76_10325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILR76_10330 PF13953 PapC C-terminal domain ILR76_10330 PF00577 Outer membrane usher protein ILR76_10330 PF13954 PapC N-terminal domain ILR76_10355 PF00892 EamA-like transporter family ILR76_10365 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILR76_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10375 PF03466 LysR substrate binding domain ILR76_10385 PF13737 Transposase DDE domain ILR76_10405 PF00440 Bacterial regulatory proteins, tetR family ILR76_10415 PF01709 Transcriptional regulator ILR76_10420 PF01037 Lrp/AsnC ligand binding domain ILR76_10430 PF00005 ABC transporter ILR76_10435 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10440 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10455 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR76_10455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_10465 PF00296 Luciferase-like monooxygenase ILR76_10470 PF03180 NLPA lipoprotein ILR76_10475 PF03180 NLPA lipoprotein ILR76_10480 PF00005 ABC transporter ILR76_10480 PF09383 NIL domain ILR76_10485 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10490 PF01926 50S ribosome-binding GTPase ILR76_10490 PF06071 Protein of unknown function (DUF933) ILR76_10515 PF03591 AzlC protein ILR76_10520 PF05437 Branched-chain amino acid transport protein (AzlD) ILR76_10530 PF02222 ATP-grasp domain ILR76_10535 PF01966 HD domain ILR76_10535 PF01909 Nucleotidyltransferase domain ILR76_10535 PF08335 GlnD PII-uridylyltransferase ILR76_10540 PF00155 Aminotransferase class I and II ILR76_10550 PF12833 Helix-turn-helix domain ILR76_10550 PF12852 Cupin ILR76_10555 PF00255 Glutathione peroxidase ILR76_10560 PF01641 SelR domain ILR76_10565 PF00155 Aminotransferase class I and II ILR76_10570 PF13737 Transposase DDE domain ILR76_10575 PF00375 Sodium:dicarboxylate symporter family ILR76_10580 PF00710 Asparaginase, N-terminal ILR76_10580 PF17763 Glutaminase/Asparaginase C-terminal domain ILR76_10585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ILR76_10585 PF07733 Bacterial DNA polymerase III alpha NTPase domain ILR76_10585 PF14579 Helix-hairpin-helix motif ILR76_10585 PF01336 OB-fold nucleic acid binding domain ILR76_10585 PF02811 PHP domain ILR76_10590 PF00588 SpoU rRNA Methylase family ILR76_10595 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_10610 PF13192 Thioredoxin domain ILR76_10610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10625 PF03466 LysR substrate binding domain ILR76_10630 PF01758 Sodium Bile acid symporter family ILR76_10635 PF01022 Bacterial regulatory protein, arsR family ILR76_10640 PF03960 ArsC family ILR76_10650 PF01979 Amidohydrolase family ILR76_10650 PF13382 Adenine deaminase C-terminal domain ILR76_10660 PF03466 LysR substrate binding domain ILR76_10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10670 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILR76_10675 PF01177 Asp/Glu/Hydantoin racemase ILR76_10680 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ILR76_10685 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10690 PF00005 ABC transporter ILR76_10695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILR76_10715 PF00083 Sugar (and other) transporter ILR76_10720 PF00296 Luciferase-like monooxygenase ILR76_10725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR76_10725 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_10725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_10735 PF01654 Cytochrome bd terminal oxidase subunit I ILR76_10740 PF02322 Cytochrome bd terminal oxidase subunit II ILR76_10750 PF00392 Bacterial regulatory proteins, gntR family ILR76_10750 PF00155 Aminotransferase class I and II ILR76_10755 PF03466 LysR substrate binding domain ILR76_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10770 PF00698 Acyl transferase domain ILR76_10775 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ILR76_10785 PF01039 Carboxyl transferase domain ILR76_10790 PF06857 Malonate decarboxylase delta subunit (MdcD) ILR76_10795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ILR76_10800 PF16957 Malonate decarboxylase, alpha subunit, transporter ILR76_10805 PF07690 Major Facilitator Superfamily ILR76_10820 PF00155 Aminotransferase class I and II ILR76_10820 PF00392 Bacterial regulatory proteins, gntR family ILR76_10825 PF04172 LrgB-like family ILR76_10830 PF03788 LrgA family ILR76_10835 PF03466 LysR substrate binding domain ILR76_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10840 PF14834 Glutathione S-transferase, C-terminal domain ILR76_10840 PF02798 Glutathione S-transferase, N-terminal domain ILR76_10845 PF02798 Glutathione S-transferase, N-terminal domain ILR76_10850 PF03466 LysR substrate binding domain ILR76_10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10860 PF00581 Rhodanese-like domain ILR76_10865 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_10875 PF00266 Aminotransferase class-V ILR76_10885 PF01810 LysE type translocator ILR76_10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_10890 PF03466 LysR substrate binding domain ILR76_10900 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR76_10905 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR76_10910 PF00005 ABC transporter ILR76_10915 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10920 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_10935 PF00072 Response regulator receiver domain ILR76_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_10940 PF00512 His Kinase A (phospho-acceptor) domain ILR76_10940 PF00072 Response regulator receiver domain ILR76_10940 PF09308 LuxQ, periplasmic ILR76_10950 PF01037 Lrp/AsnC ligand binding domain ILR76_10950 PF13404 AsnC-type helix-turn-helix domain ILR76_10960 PF00717 Peptidase S24-like ILR76_10985 PF00199 Catalase ILR76_10985 PF06628 Catalase-related immune-responsive ILR76_10985 PF18011 C-terminal domain found in long catalases ILR76_10995 PF00994 Probable molybdopterin binding domain ILR76_10995 PF18146 Damage-inducible protein CinA KH domain ILR76_10995 PF02464 Competence-damaged protein ILR76_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_11030 PF03466 LysR substrate binding domain ILR76_11050 PF00501 AMP-binding enzyme ILR76_11050 PF13193 AMP-binding enzyme C-terminal domain ILR76_11055 PF00440 Bacterial regulatory proteins, tetR family ILR76_11060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_11060 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_11065 PF01039 Carboxyl transferase domain ILR76_11070 PF00378 Enoyl-CoA hydratase/isomerase ILR76_11075 PF02785 Biotin carboxylase C-terminal domain ILR76_11075 PF00289 Biotin carboxylase, N-terminal domain ILR76_11075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR76_11075 PF18140 Propionyl-coenzyme A carboxylase BT domain ILR76_11075 PF00364 Biotin-requiring enzyme ILR76_11080 PF00682 HMGL-like ILR76_11085 PF03466 LysR substrate binding domain ILR76_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_11100 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_11100 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR76_11100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_11110 PF07690 Major Facilitator Superfamily ILR76_11120 PF01144 Coenzyme A transferase ILR76_11125 PF01144 Coenzyme A transferase ILR76_11130 PF07690 Major Facilitator Superfamily ILR76_11135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_11135 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_11135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_11140 PF00378 Enoyl-CoA hydratase/isomerase ILR76_11150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR76_11150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR76_11150 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ILR76_11155 PF00108 Thiolase, N-terminal domain ILR76_11155 PF02803 Thiolase, C-terminal domain ILR76_11160 PF09339 IclR helix-turn-helix domain ILR76_11165 PF07690 Major Facilitator Superfamily ILR76_11170 PF03060 Nitronate monooxygenase ILR76_11175 PF00378 Enoyl-CoA hydratase/isomerase ILR76_11180 PF09339 IclR helix-turn-helix domain ILR76_11185 PF02515 CoA-transferase family III ILR76_11190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_11190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_11190 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_11195 PF07690 Major Facilitator Superfamily ILR76_11200 PF13419 Haloacid dehalogenase-like hydrolase ILR76_11205 PF00266 Aminotransferase class-V ILR76_11210 PF01266 FAD dependent oxidoreductase ILR76_11215 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_11220 PF08402 TOBE domain ILR76_11220 PF00005 ABC transporter ILR76_11230 PF07702 UTRA domain ILR76_11230 PF00392 Bacterial regulatory proteins, gntR family ILR76_11235 PF01494 FAD binding domain ILR76_11240 PF09339 IclR helix-turn-helix domain ILR76_11240 PF01614 Bacterial transcriptional regulator ILR76_11250 PF13610 DDE domain ILR76_11260 PF01695 IstB-like ATP binding protein ILR76_11270 PF00809 Pterin binding enzyme ILR76_11275 PF00893 Small Multidrug Resistance protein ILR76_11280 PF13427 Domain of unknown function (DUF4111) ILR76_11285 PF10706 Aminoglycoside-2''-adenylyltransferase ILR76_11290 PF13495 Phage integrase, N-terminal SAM-like domain ILR76_11290 PF00589 Phage integrase family ILR76_11300 PF13610 DDE domain ILR76_11310 PF06719 AraC-type transcriptional regulator N-terminus ILR76_11310 PF12833 Helix-turn-helix domain ILR76_11320 PF00313 'Cold-shock' DNA-binding domain ILR76_11325 PF13737 Transposase DDE domain ILR76_11330 PF13936 Helix-turn-helix domain ILR76_11330 PF00665 Integrase core domain ILR76_11365 PF17757 UvrB interaction domain ILR76_11365 PF12344 Ultra-violet resistance protein B ILR76_11365 PF04851 Type III restriction enzyme, res subunit ILR76_11365 PF02151 UvrB/uvrC motif ILR76_11365 PF00271 Helicase conserved C-terminal domain ILR76_11375 PF03061 Thioesterase superfamily ILR76_11380 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_11385 PF08223 PaaX-like protein C-terminal domain ILR76_11385 PF07848 PaaX-like protein ILR76_11390 PF00501 AMP-binding enzyme ILR76_11390 PF14535 AMP-binding enzyme C-terminal domain ILR76_11395 PF00108 Thiolase, N-terminal domain ILR76_11395 PF02803 Thiolase, C-terminal domain ILR76_11400 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ILR76_11400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR76_11400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR76_11405 PF00378 Enoyl-CoA hydratase/isomerase ILR76_11410 PF00378 Enoyl-CoA hydratase/isomerase ILR76_11415 PF00970 Oxidoreductase FAD-binding domain ILR76_11415 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_11415 PF00175 Oxidoreductase NAD-binding domain ILR76_11420 PF01883 Iron-sulfur cluster assembly protein ILR76_11425 PF05138 Phenylacetic acid catabolic protein ILR76_11430 PF06243 Phenylacetic acid degradation B ILR76_11435 PF05138 Phenylacetic acid catabolic protein ILR76_11440 PF01575 MaoC like domain ILR76_11440 PF00171 Aldehyde dehydrogenase family ILR76_11445 PF03315 Serine dehydratase beta chain ILR76_11445 PF03313 Serine dehydratase alpha chain ILR76_11450 PF13520 Amino acid permease ILR76_11455 PF00171 Aldehyde dehydrogenase family ILR76_11460 PF00083 Sugar (and other) transporter ILR76_11470 PF04324 BFD-like [2Fe-2S] binding domain ILR76_11470 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_11480 PF01266 FAD dependent oxidoreductase ILR76_11485 PF05544 Proline racemase ILR76_11490 PF00392 Bacterial regulatory proteins, gntR family ILR76_11500 PF00701 Dihydrodipicolinate synthetase family ILR76_11505 PF13737 Transposase DDE domain ILR76_11510 PF02677 Epoxyqueuosine reductase QueH ILR76_11525 PF07690 Major Facilitator Superfamily ILR76_11530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILR76_11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_11540 PF03466 LysR substrate binding domain ILR76_11560 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ILR76_11565 PF06812 ImpA, N-terminal, type VI secretion system ILR76_11570 PF10431 C-terminal, D2-small domain, of ClpB protein ILR76_11570 PF07724 AAA domain (Cdc48 subfamily) ILR76_11570 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_11570 PF17871 AAA lid domain ILR76_11580 PF00691 OmpA family ILR76_11580 PF01389 OmpA-like transmembrane domain ILR76_11590 PF06761 Intracellular multiplication and human macrophage-killing ILR76_11590 PF14331 ImcF-related N-terminal domain ILR76_11590 PF06744 Type VI secretion protein IcmF C-terminal ILR76_11615 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_11615 PF13823 Alcohol dehydrogenase GroES-associated ILR76_11615 PF00107 Zinc-binding dehydrogenase ILR76_11625 PF00440 Bacterial regulatory proteins, tetR family ILR76_11645 PF00654 Voltage gated chloride channel ILR76_11650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR76_11650 PF00289 Biotin carboxylase, N-terminal domain ILR76_11650 PF00364 Biotin-requiring enzyme ILR76_11650 PF02785 Biotin carboxylase C-terminal domain ILR76_11660 PF07286 Protein of unknown function (DUF1445) ILR76_11665 PF03746 LamB/YcsF family ILR76_11670 PF01566 Natural resistance-associated macrophage protein ILR76_11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_11675 PF03466 LysR substrate binding domain ILR76_11690 PF05593 RHS Repeat ILR76_11690 PF03527 RHS protein ILR76_11695 PF04717 Type VI secretion system, phage-baseplate injector ILR76_11695 PF13296 Putative type VI secretion system Rhs element Vgr ILR76_11695 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ILR76_11705 PF13419 Haloacid dehalogenase-like hydrolase ILR76_11725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR76_11725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR76_11745 PF07690 Major Facilitator Superfamily ILR76_11755 PF03279 Bacterial lipid A biosynthesis acyltransferase ILR76_11760 PF00990 Diguanylate cyclase, GGDEF domain ILR76_11760 PF00563 EAL domain ILR76_11760 PF03707 Bacterial signalling protein N terminal repeat ILR76_11765 PF00892 EamA-like transporter family ILR76_11770 PF01037 Lrp/AsnC ligand binding domain ILR76_11775 PF01624 MutS domain I ILR76_11775 PF05188 MutS domain II ILR76_11775 PF05192 MutS domain III ILR76_11775 PF05190 MutS family domain IV ILR76_11775 PF00488 MutS domain V ILR76_11785 PF11953 Domain of unknown function (DUF3470) ILR76_11785 PF00037 4Fe-4S binding domain ILR76_11795 PF01596 O-methyltransferase ILR76_11805 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_11810 PF01205 Uncharacterized protein family UPF0029 ILR76_11820 PF00664 ABC transporter transmembrane region ILR76_11820 PF00005 ABC transporter ILR76_11820 PF03412 Peptidase C39 family ILR76_11825 PF02321 Outer membrane efflux protein ILR76_11830 PF00005 ABC transporter ILR76_11830 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILR76_11835 PF03968 OstA-like protein ILR76_11850 PF00571 CBS domain ILR76_11850 PF01380 SIS domain ILR76_11855 PF01406 tRNA synthetases class I (C) catalytic domain ILR76_11855 PF09190 DALR domain ILR76_11875 PF00665 Integrase core domain ILR76_11875 PF13936 Helix-turn-helix domain ILR76_11895 PF01638 HxlR-like helix-turn-helix ILR76_11900 PF07690 Major Facilitator Superfamily ILR76_11925 PF03807 NADP oxidoreductase coenzyme F420-dependent ILR76_11925 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILR76_11935 PF00313 'Cold-shock' DNA-binding domain ILR76_11940 PF01810 LysE type translocator ILR76_11960 PF13737 Transposase DDE domain ILR76_11980 PF00376 MerR family regulatory protein ILR76_11980 PF09278 MerR, DNA binding ILR76_11985 PF00403 Heavy-metal-associated domain ILR76_11990 PF00403 Heavy-metal-associated domain ILR76_11995 PF03466 LysR substrate binding domain ILR76_11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_12000 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR76_12000 PF00355 Rieske [2Fe-2S] domain ILR76_12005 PF00866 Ring hydroxylating beta subunit ILR76_12010 PF00175 Oxidoreductase NAD-binding domain ILR76_12010 PF00970 Oxidoreductase FAD-binding domain ILR76_12010 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_12015 PF00106 short chain dehydrogenase ILR76_12020 PF03594 Benzoate membrane transport protein ILR76_12025 PF07690 Major Facilitator Superfamily ILR76_12035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ILR76_12035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ILR76_12040 PF00271 Helicase conserved C-terminal domain ILR76_12040 PF04408 Helicase associated domain (HA2) ILR76_12040 PF11898 Domain of unknown function (DUF3418) ILR76_12040 PF00270 DEAD/DEAH box helicase ILR76_12040 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ILR76_12045 PF00578 AhpC/TSA family ILR76_12045 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILR76_12065 PF13192 Thioredoxin domain ILR76_12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_12075 PF00043 Glutathione S-transferase, C-terminal domain ILR76_12075 PF02798 Glutathione S-transferase, N-terminal domain ILR76_12085 PF02390 Putative methyltransferase ILR76_12090 PF00043 Glutathione S-transferase, C-terminal domain ILR76_12090 PF13417 Glutathione S-transferase, N-terminal domain ILR76_12100 PF00691 OmpA family ILR76_12100 PF13488 Glycine zipper ILR76_12105 PF01979 Amidohydrolase family ILR76_12110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILR76_12110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILR76_12120 PF10672 S-adenosylmethionine-dependent methyltransferase ILR76_12120 PF02926 THUMP domain ILR76_12120 PF01170 Putative RNA methylase family UPF0020 ILR76_12135 PF07724 AAA domain (Cdc48 subfamily) ILR76_12135 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_12135 PF10431 C-terminal, D2-small domain, of ClpB protein ILR76_12135 PF17871 AAA lid domain ILR76_12135 PF02861 Clp amino terminal domain, pathogenicity island component ILR76_12150 PF02566 OsmC-like protein ILR76_12160 PF00027 Cyclic nucleotide-binding domain ILR76_12160 PF13545 Crp-like helix-turn-helix domain ILR76_12165 PF00248 Aldo/keto reductase family ILR76_12180 PF00709 Adenylosuccinate synthetase ILR76_12185 PF13393 Histidyl-tRNA synthetase ILR76_12190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILR76_12190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILR76_12195 PF02272 DHHA1 domain ILR76_12195 PF01411 tRNA synthetases class II (A) ILR76_12195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILR76_12200 PF00696 Amino acid kinase family ILR76_12200 PF01842 ACT domain ILR76_12200 PF13840 ACT domain ILR76_12205 PF02599 Global regulator protein family ILR76_12210 PF01351 Ribonuclease HII ILR76_12220 PF01292 Prokaryotic cytochrome b561 ILR76_12225 PF00962 Adenosine/AMP deaminase ILR76_12230 PF00860 Permease family ILR76_12240 PF00743 Flavin-binding monooxygenase-like ILR76_12245 PF00106 short chain dehydrogenase ILR76_12250 PF13936 Helix-turn-helix domain ILR76_12250 PF00665 Integrase core domain ILR76_12260 PF02678 Pirin ILR76_12260 PF17954 Quercetinase C-terminal cupin domain ILR76_12265 PF17932 Tetracyclin repressor-like, C-terminal domain ILR76_12265 PF00440 Bacterial regulatory proteins, tetR family ILR76_12275 PF13610 DDE domain ILR76_12285 PF01266 FAD dependent oxidoreductase ILR76_12285 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ILR76_12290 PF18113 Rubredoxin binding C-terminal domain ILR76_12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_12295 PF00171 Aldehyde dehydrogenase family ILR76_12300 PF00355 Rieske [2Fe-2S] domain ILR76_12300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR76_12305 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_12310 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_12315 PF03466 LysR substrate binding domain ILR76_12320 PF00324 Amino acid permease ILR76_12325 PF00171 Aldehyde dehydrogenase family ILR76_12340 PF17853 GGDEF-like domain ILR76_12340 PF06018 CodY GAF-like domain ILR76_12340 PF13556 PucR C-terminal helix-turn-helix domain ILR76_12370 PF04328 Selenoprotein, putative ILR76_12375 PF13722 5TM C-terminal transporter carbon starvation CstA ILR76_12375 PF02554 Carbon starvation protein CstA ILR76_12380 PF01132 Elongation factor P (EF-P) OB domain ILR76_12380 PF09285 Elongation factor P, C-terminal ILR76_12380 PF08207 Elongation factor P (EF-P) KOW-like domain ILR76_12385 PF04055 Radical SAM superfamily ILR76_12400 PF01197 Ribosomal protein L31 ILR76_12405 PF13593 SBF-like CPA transporter family (DUF4137) ILR76_12410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR76_12415 PF07690 Major Facilitator Superfamily ILR76_12420 PF05362 Lon protease (S16) C-terminal proteolytic domain ILR76_12420 PF13654 AAA domain ILR76_12425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_12425 PF03466 LysR substrate binding domain ILR76_12430 PF01476 LysM domain ILR76_12430 PF01551 Peptidase family M23 ILR76_12435 PF01975 Survival protein SurE ILR76_12450 PF00768 D-alanyl-D-alanine carboxypeptidase ILR76_12450 PF07943 Penicillin-binding protein 5, C-terminal domain ILR76_12455 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_12460 PF13344 Haloacid dehalogenase-like hydrolase ILR76_12460 PF00293 NUDIX domain ILR76_12470 PF04356 Protein of unknown function (DUF489) ILR76_12475 PF08328 Adenylosuccinate lyase C-terminal ILR76_12475 PF00206 Lyase ILR76_12490 PF01343 Peptidase family S49 ILR76_12490 PF08496 Peptidase family S49 N-terminal ILR76_12495 PF00005 ABC transporter ILR76_12500 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_12505 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_12510 PF12849 PBP superfamily domain ILR76_12515 PF00324 Amino acid permease ILR76_12520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR76_12520 PF00205 Thiamine pyrophosphate enzyme, central domain ILR76_12520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR76_12525 PF01037 Lrp/AsnC ligand binding domain ILR76_12530 PF00171 Aldehyde dehydrogenase family ILR76_12535 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILR76_12540 PF00202 Aminotransferase class-III ILR76_12550 PF00440 Bacterial regulatory proteins, tetR family ILR76_12550 PF17754 MftR C-terminal domain ILR76_12560 PF00487 Fatty acid desaturase ILR76_12565 PF00970 Oxidoreductase FAD-binding domain ILR76_12565 PF00175 Oxidoreductase NAD-binding domain ILR76_12565 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_12570 PF00440 Bacterial regulatory proteins, tetR family ILR76_12580 PF18339 RapA N-terminal Tudor like domain 1 ILR76_12580 PF12137 RNA polymerase recycling family C-terminal ILR76_12580 PF00271 Helicase conserved C-terminal domain ILR76_12580 PF18337 RapA N-terminal Tudor like domain ILR76_12580 PF00176 SNF2 family N-terminal domain ILR76_12585 PF00849 RNA pseudouridylate synthase ILR76_12595 PF00202 Aminotransferase class-III ILR76_12600 PF02581 Thiamine monophosphate synthase ILR76_12610 PF13610 DDE domain ILR76_12620 PF13296 Putative type VI secretion system Rhs element Vgr ILR76_12620 PF04717 Type VI secretion system, phage-baseplate injector ILR76_12620 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ILR76_12640 PF03180 NLPA lipoprotein ILR76_12645 PF05987 Bacterial protein of unknown function (DUF898) ILR76_12660 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_12660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_12665 PF00764 Arginosuccinate synthase ILR76_12670 PF00563 EAL domain ILR76_12670 PF01590 GAF domain ILR76_12670 PF00990 Diguanylate cyclase, GGDEF domain ILR76_12670 PF00360 Phytochrome region ILR76_12675 PF01979 Amidohydrolase family ILR76_12680 PF00929 Exonuclease ILR76_12690 PF07715 TonB-dependent Receptor Plug Domain ILR76_12690 PF00593 TonB dependent receptor ILR76_12695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR76_12695 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_12700 PF00005 ABC transporter ILR76_12700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILR76_12705 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_12705 PF12911 N-terminal TM domain of oligopeptide transport permease C ILR76_12710 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_12715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILR76_12720 PF01476 LysM domain ILR76_12720 PF01464 Transglycosylase SLT domain ILR76_12720 PF01464 Transglycosylase SLT domain ILR76_12720 PF01476 LysM domain ILR76_12725 PF00929 Exonuclease ILR76_12735 PF09297 NADH pyrophosphatase zinc ribbon domain ILR76_12735 PF00293 NUDIX domain ILR76_12745 PF04972 BON domain ILR76_12750 PF02021 Uncharacterised protein family UPF0102 ILR76_12755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILR76_12765 PF03466 LysR substrate binding domain ILR76_12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_12770 PF01810 LysE type translocator ILR76_12780 PF13411 MerR HTH family regulatory protein ILR76_12790 PF01494 FAD binding domain ILR76_12795 PF01494 FAD binding domain ILR76_12800 PF00557 Metallopeptidase family M24 ILR76_12800 PF05195 Aminopeptidase P, N-terminal domain ILR76_12840 PF08019 Phosphoethanolamine transferase EptA/EptB ILR76_12840 PF00884 Sulfatase ILR76_12905 PF03869 Arc-like DNA binding domain ILR76_13215 PF01812 5-formyltetrahydrofolate cyclo-ligase family ILR76_13220 PF00691 OmpA family ILR76_13220 PF04355 SmpA / OmlA family ILR76_13225 PF13018 Extended Signal Peptide of Type V secretion system ILR76_13225 PF05662 Coiled stalk of trimeric autotransporter adhesin ILR76_13225 PF03895 YadA-like membrane anchor domain ILR76_13225 PF05658 Head domain of trimeric autotransporter adhesin ILR76_13230 PF00004 ATPase family associated with various cellular activities (AAA) ILR76_13230 PF05362 Lon protease (S16) C-terminal proteolytic domain ILR76_13230 PF02190 ATP-dependent protease La (LON) substrate-binding domain ILR76_13235 PF02590 Predicted SPOUT methyltransferase ILR76_13240 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILR76_13250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILR76_13250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILR76_13255 PF04060 Putative Fe-S cluster ILR76_13260 PF10576 Iron-sulfur binding domain of endonuclease III ILR76_13260 PF00730 HhH-GPD superfamily base excision DNA repair protein ILR76_13260 PF00633 Helix-hairpin-helix motif ILR76_13270 PF05191 Adenylate kinase, active site lid ILR76_13285 PF03717 Penicillin-binding Protein dimerisation domain ILR76_13285 PF00905 Penicillin binding protein transpeptidase domain ILR76_13300 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR76_13305 PF01730 UreF ILR76_13310 PF05194 UreE urease accessory protein, C-terminal domain ILR76_13310 PF02814 UreE urease accessory protein, N-terminal domain ILR76_13320 PF00547 Urease, gamma subunit ILR76_13325 PF01774 UreD urease accessory protein ILR76_13340 PF00463 Isocitrate lyase family ILR76_13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_13345 PF03466 LysR substrate binding domain ILR76_13350 PF00571 CBS domain ILR76_13350 PF03471 Transporter associated domain ILR76_13350 PF01595 Cyclin M transmembrane N-terminal domain ILR76_13355 PF03600 Citrate transporter ILR76_13370 PF00009 Elongation factor Tu GTP binding domain ILR76_13375 PF01507 Phosphoadenosine phosphosulfate reductase family ILR76_13385 PF14052 Capsule assembly protein Wzi ILR76_13390 PF01336 OB-fold nucleic acid binding domain ILR76_13390 PF00152 tRNA synthetases class II (D, K and N) ILR76_13405 PF00301 Rubredoxin ILR76_13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_13410 PF18113 Rubredoxin binding C-terminal domain ILR76_13415 PF00561 alpha/beta hydrolase fold ILR76_13420 PF03466 LysR substrate binding domain ILR76_13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_13435 PF13089 Polyphosphate kinase N-terminal domain ILR76_13435 PF17941 Polyphosphate kinase C-terminal domain 1 ILR76_13435 PF13090 Polyphosphate kinase C-terminal domain 2 ILR76_13435 PF02503 Polyphosphate kinase middle domain ILR76_13440 PF00912 Transglycosylase ILR76_13445 PF01694 Rhomboid family ILR76_13455 PF00005 ABC transporter ILR76_13460 PF13472 GDSL-like Lipase/Acylhydrolase family ILR76_13465 PF00484 Carbonic anhydrase ILR76_13470 PF00561 alpha/beta hydrolase fold ILR76_13480 PF07715 TonB-dependent Receptor Plug Domain ILR76_13480 PF00593 TonB dependent receptor ILR76_13485 PF01521 Iron-sulphur cluster biosynthesis ILR76_13485 PF01106 NifU-like domain ILR76_13495 PF00884 Sulfatase ILR76_13500 PF03781 Sulfatase-modifying factor enzyme 1 ILR76_13515 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_13520 PF01384 Phosphate transporter family ILR76_13525 PF02310 B12 binding domain ILR76_13525 PF02607 B12 binding domain ILR76_13525 PF02965 Vitamin B12 dependent methionine synthase, activation domain ILR76_13525 PF00809 Pterin binding enzyme ILR76_13525 PF02574 Homocysteine S-methyltransferase ILR76_13530 PF02780 Transketolase, C-terminal domain ILR76_13530 PF02779 Transketolase, pyrimidine binding domain ILR76_13535 PF00456 Transketolase, thiamine diphosphate binding domain ILR76_13540 PF07690 Major Facilitator Superfamily ILR76_13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_13550 PF03466 LysR substrate binding domain ILR76_13560 PF01263 Aldose 1-epimerase ILR76_13565 PF07690 Major Facilitator Superfamily ILR76_13570 PF02311 AraC-like ligand binding domain ILR76_13570 PF12833 Helix-turn-helix domain ILR76_13575 PF04960 Glutaminase ILR76_13580 PF01327 Polypeptide deformylase ILR76_13585 PF07690 Major Facilitator Superfamily ILR76_13595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR76_13595 PF00205 Thiamine pyrophosphate enzyme, central domain ILR76_13595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR76_13600 PF00171 Aldehyde dehydrogenase family ILR76_13605 PF03447 Homoserine dehydrogenase, NAD binding domain ILR76_13605 PF01958 Domain of unknown function DUF108 ILR76_13615 PF12697 Alpha/beta hydrolase family ILR76_13625 PF07690 Major Facilitator Superfamily ILR76_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_13630 PF14759 Reductase C-terminal ILR76_13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR76_13645 PF00355 Rieske [2Fe-2S] domain ILR76_13655 PF00355 Rieske [2Fe-2S] domain ILR76_13660 PF09339 IclR helix-turn-helix domain ILR76_13660 PF01614 Bacterial transcriptional regulator ILR76_13675 PF00378 Enoyl-CoA hydratase/isomerase ILR76_13685 PF00535 Glycosyl transferase family 2 ILR76_13690 PF01522 Polysaccharide deacetylase ILR76_13690 PF14883 Hypothetical glycosyl hydrolase family 13 ILR76_13695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_13700 PF07152 YaeQ protein ILR76_13705 PF00375 Sodium:dicarboxylate symporter family ILR76_13710 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR76_13710 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILR76_13720 PF03061 Thioesterase superfamily ILR76_13730 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_13735 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_13740 PF13977 BetI-type transcriptional repressor, C-terminal ILR76_13740 PF00440 Bacterial regulatory proteins, tetR family ILR76_13745 PF00171 Aldehyde dehydrogenase family ILR76_13750 PF05199 GMC oxidoreductase ILR76_13750 PF00732 GMC oxidoreductase ILR76_13755 PF06039 Malate:quinone oxidoreductase (Mqo) ILR76_13765 PF02574 Homocysteine S-methyltransferase ILR76_13770 PF13520 Amino acid permease ILR76_13795 PF01126 Heme oxygenase ILR76_13805 PF04575 Protein of unknown function (DUF560) ILR76_13820 PF07715 TonB-dependent Receptor Plug Domain ILR76_13820 PF00593 TonB dependent receptor ILR76_13830 PF04542 Sigma-70 region 2 ILR76_13830 PF08281 Sigma-70, region 4 ILR76_13840 PF00701 Dihydrodipicolinate synthetase family ILR76_13845 PF00083 Sugar (and other) transporter ILR76_13890 PF07690 Major Facilitator Superfamily ILR76_13895 PF13533 Biotin-lipoyl like ILR76_13900 PF03061 Thioesterase superfamily ILR76_13905 PF00490 Delta-aminolevulinic acid dehydratase ILR76_13910 PF01266 FAD dependent oxidoreductase ILR76_13915 PF08338 Domain of unknown function (DUF1731) ILR76_13915 PF01370 NAD dependent epimerase/dehydratase family ILR76_13935 PF12320 Type 5 capsule protein repressor C-terminal domain ILR76_13935 PF00149 Calcineurin-like phosphoesterase ILR76_13945 PF01168 Alanine racemase, N-terminal domain ILR76_13950 PF00437 Type II/IV secretion system protein ILR76_13955 PF00437 Type II/IV secretion system protein ILR76_13960 PF01475 Ferric uptake regulator family ILR76_13965 PF04355 SmpA / OmlA family ILR76_13970 PF03658 RnfH family Ubiquitin ILR76_13980 PF01814 Hemerythrin HHE cation binding domain ILR76_13985 PF13230 Glutamine amidotransferases class-II ILR76_13995 PF00696 Amino acid kinase family ILR76_14000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR76_14000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR76_14000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR76_14000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR76_14005 PF00692 dUTPase ILR76_14010 PF13361 UvrD-like helicase C-terminal domain ILR76_14010 PF00580 UvrD/REP helicase N-terminal domain ILR76_14015 PF13488 Glycine zipper ILR76_14015 PF00691 OmpA family ILR76_14020 PF01553 Acyltransferase ILR76_14030 PF03775 Septum formation inhibitor MinC, C-terminal domain ILR76_14035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ILR76_14040 PF03776 Septum formation topological specificity factor MinE ILR76_14055 PF00665 Integrase core domain ILR76_14055 PF13936 Helix-turn-helix domain ILR76_14065 PF01810 LysE type translocator ILR76_14080 PF13005 zinc-finger binding domain of transposase IS66 ILR76_14080 PF13007 Transposase C of IS166 homeodomain ILR76_14080 PF13817 IS66 C-terminal element ILR76_14080 PF03050 Transposase IS66 family ILR76_14085 PF01580 FtsK/SpoIIIE family ILR76_14085 PF17854 FtsK alpha domain ILR76_14085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ILR76_14085 PF09397 Ftsk gamma domain ILR76_14090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR76_14095 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ILR76_14100 PF04377 Arginine-tRNA-protein transferase, C terminus ILR76_14100 PF04376 Arginine-tRNA-protein transferase, N terminus ILR76_14105 PF00583 Acetyltransferase (GNAT) family ILR76_14120 PF03144 Elongation factor Tu domain 2 ILR76_14120 PF03143 Elongation factor Tu C-terminal domain ILR76_14120 PF00009 Elongation factor Tu GTP binding domain ILR76_14125 PF00009 Elongation factor Tu GTP binding domain ILR76_14125 PF03144 Elongation factor Tu domain 2 ILR76_14125 PF14492 Elongation Factor G, domain II ILR76_14125 PF03764 Elongation factor G, domain IV ILR76_14125 PF00679 Elongation factor G C-terminus ILR76_14130 PF00177 Ribosomal protein S7p/S5e ILR76_14135 PF00164 Ribosomal protein S12/S23 ILR76_14145 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_14145 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_14150 PF03653 Uncharacterised protein family (UPF0093) ILR76_14155 PF05726 Pirin C-terminal cupin domain ILR76_14155 PF02678 Pirin ILR76_14165 PF00795 Carbon-nitrogen hydrolase ILR76_14165 PF02540 NAD synthase ILR76_14180 PF00970 Oxidoreductase FAD-binding domain ILR76_14180 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR76_14180 PF00175 Oxidoreductase NAD-binding domain ILR76_14185 PF00171 Aldehyde dehydrogenase family ILR76_14190 PF00355 Rieske [2Fe-2S] domain ILR76_14190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR76_14195 PF07859 alpha/beta hydrolase fold ILR76_14200 PF02028 BCCT, betaine/carnitine/choline family transporter ILR76_14205 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR76_14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14210 PF03466 LysR substrate binding domain ILR76_14230 PF00037 4Fe-4S binding domain ILR76_14235 PF01467 Cytidylyltransferase-like ILR76_14240 PF01668 SmpB protein ILR76_14245 PF03358 NADPH-dependent FMN reductase ILR76_14250 PF02578 Multi-copper polyphenol oxidoreductase laccase ILR76_14255 PF01479 S4 domain ILR76_14255 PF00849 RNA pseudouridylate synthase ILR76_14260 PF13525 Outer membrane lipoprotein ILR76_14265 PF08278 DNA primase DnaG DnaB-binding ILR76_14265 PF08275 DNA primase catalytic core, N-terminal domain ILR76_14265 PF01807 CHC2 zinc finger ILR76_14265 PF10410 DnaB-helicase binding domain of primase ILR76_14270 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ILR76_14270 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ILR76_14270 PF01488 Shikimate / quinate 5-dehydrogenase ILR76_14280 PF03550 Outer membrane lipoprotein LolB ILR76_14285 PF00288 GHMP kinases N terminal domain ILR76_14285 PF08544 GHMP kinases C terminal ILR76_14310 PF14572 Phosphoribosyl synthetase-associated domain ILR76_14310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILR76_14315 PF01386 Ribosomal L25p family ILR76_14320 PF01195 Peptidyl-tRNA hydrolase ILR76_14325 PF02261 Aspartate decarboxylase ILR76_14340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILR76_14350 PF03070 TENA/THI-4/PQQC family ILR76_14350 PF08543 Phosphomethylpyrimidine kinase ILR76_14350 PF02581 Thiamine monophosphate synthase ILR76_14355 PF01476 LysM domain ILR76_14355 PF04972 BON domain ILR76_14360 PF00550 Phosphopantetheine attachment site ILR76_14370 PF00698 Acyl transferase domain ILR76_14375 PF01783 Ribosomal L32p protein family ILR76_14380 PF02620 Large ribosomal RNA subunit accumulation protein YceD ILR76_14385 PF04315 Elongation factor P hydroxylase ILR76_14390 PF01300 Telomere recombination ILR76_14395 PF02616 Segregation and condensation protein ScpA ILR76_14400 PF04079 Segregation and condensation complex subunit ScpB ILR76_14405 PF00849 RNA pseudouridylate synthase ILR76_14405 PF01479 S4 domain ILR76_14420 PF00155 Aminotransferase class I and II ILR76_14425 PF00202 Aminotransferase class-III ILR76_14425 PF06968 Biotin and Thiamin Synthesis associated domain ILR76_14425 PF04055 Radical SAM superfamily ILR76_14430 PF12697 Alpha/beta hydrolase family ILR76_14430 PF08241 Methyltransferase domain ILR76_14435 PF02358 Trehalose-phosphatase ILR76_14440 PF00982 Glycosyltransferase family 20 ILR76_14445 PF07690 Major Facilitator Superfamily ILR76_14450 PF00210 Ferritin-like domain ILR76_14455 PF12826 Helix-hairpin-helix motif ILR76_14455 PF01653 NAD-dependent DNA ligase adenylation domain ILR76_14455 PF03120 NAD-dependent DNA ligase OB-fold domain ILR76_14455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ILR76_14455 PF00533 BRCA1 C Terminus (BRCT) domain ILR76_14465 PF02463 RecF/RecN/SMC N terminal domain ILR76_14465 PF06470 SMC proteins Flexible Hinge Domain ILR76_14475 PF01925 Sulfite exporter TauE/SafE ILR76_14485 PF03309 Type III pantothenate kinase ILR76_14490 PF00448 SRP54-type protein, GTPase domain ILR76_14490 PF02881 SRP54-type protein, helical bundle domain ILR76_14490 PF02978 Signal peptide binding domain ILR76_14500 PF01207 Dihydrouridine synthase (Dus) ILR76_14530 PF00692 dUTPase ILR76_14545 PF01048 Phosphorylase superfamily ILR76_14550 PF10609 NUBPL iron-transfer P-loop NTPase ILR76_14560 PF09334 tRNA synthetases class I (M) ILR76_14560 PF01588 Putative tRNA binding domain ILR76_14585 PF13533 Biotin-lipoyl like ILR76_14590 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_14605 PF05552 Conserved TM helix ILR76_14620 PF00970 Oxidoreductase FAD-binding domain ILR76_14620 PF00175 Oxidoreductase NAD-binding domain ILR76_14625 PF03466 LysR substrate binding domain ILR76_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14630 PF00313 'Cold-shock' DNA-binding domain ILR76_14640 PF00361 Proton-conducting membrane transporter ILR76_14645 PF00361 Proton-conducting membrane transporter ILR76_14650 PF00361 Proton-conducting membrane transporter ILR76_14650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILR76_14655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILR76_14660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ILR76_14665 PF12838 4Fe-4S dicluster domain ILR76_14670 PF00146 NADH dehydrogenase ILR76_14675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR76_14675 PF00384 Molybdopterin oxidoreductase ILR76_14675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ILR76_14680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILR76_14680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ILR76_14680 PF10531 SLBB domain ILR76_14690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILR76_14690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILR76_14695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILR76_14700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ILR76_14705 PF17151 Periplasmic sensor domain ILR76_14705 PF00990 Diguanylate cyclase, GGDEF domain ILR76_14715 PF00512 His Kinase A (phospho-acceptor) domain ILR76_14715 PF00672 HAMP domain ILR76_14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_14720 PF00072 Response regulator receiver domain ILR76_14720 PF00486 Transcriptional regulatory protein, C terminal ILR76_14730 PF03477 ATP cone domain ILR76_14730 PF02867 Ribonucleotide reductase, barrel domain ILR76_14730 PF00317 Ribonucleotide reductase, all-alpha domain ILR76_14740 PF00268 Ribonucleotide reductase, small chain ILR76_14750 PF13755 Sensor N-terminal transmembrane domain ILR76_14750 PF13756 Stimulus-sensing domain ILR76_14750 PF00512 His Kinase A (phospho-acceptor) domain ILR76_14750 PF00672 HAMP domain ILR76_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_14820 PF01011 PQQ enzyme repeat ILR76_14820 PF13360 PQQ-like domain ILR76_14845 PF02567 Phenazine biosynthesis-like protein ILR76_14855 PF13936 Helix-turn-helix domain ILR76_14855 PF00665 Integrase core domain ILR76_14865 PF13737 Transposase DDE domain ILR76_14880 PF01613 Flavin reductase like domain ILR76_14885 PF08267 Cobalamin-independent synthase, N-terminal domain ILR76_14885 PF01717 Cobalamin-independent synthase, Catalytic domain ILR76_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14895 PF03466 LysR substrate binding domain ILR76_14900 PF01810 LysE type translocator ILR76_14910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR76_14910 PF12833 Helix-turn-helix domain ILR76_14915 PF07687 Peptidase dimerisation domain ILR76_14915 PF01546 Peptidase family M20/M25/M40 ILR76_14925 PF03466 LysR substrate binding domain ILR76_14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14930 PF07690 Major Facilitator Superfamily ILR76_14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14940 PF03466 LysR substrate binding domain ILR76_14945 PF14537 Cytochrome c3 ILR76_14945 PF00890 FAD binding domain ILR76_14955 PF02515 CoA-transferase family III ILR76_14960 PF07690 Major Facilitator Superfamily ILR76_14965 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_14970 PF03466 LysR substrate binding domain ILR76_14975 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_14975 PF00107 Zinc-binding dehydrogenase ILR76_14980 PF00962 Adenosine/AMP deaminase ILR76_15005 PF02445 Quinolinate synthetase A protein ILR76_15010 PF01960 ArgJ family ILR76_15015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILR76_15015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR76_15020 PF00893 Small Multidrug Resistance protein ILR76_15030 PF05275 Copper resistance protein B precursor (CopB) ILR76_15035 PF07731 Multicopper oxidase ILR76_15035 PF00394 Multicopper oxidase ILR76_15035 PF07732 Multicopper oxidase ILR76_15050 PF00834 Ribulose-phosphate 3 epimerase family ILR76_15060 PF00756 Putative esterase ILR76_15070 PF04445 Putative SAM-dependent methyltransferase ILR76_15075 PF00814 Glycoprotease family ILR76_15080 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_15085 PF00293 NUDIX domain ILR76_15120 PF13007 Transposase C of IS166 homeodomain ILR76_15120 PF03050 Transposase IS66 family ILR76_15120 PF13817 IS66 C-terminal element ILR76_15120 PF13005 zinc-finger binding domain of transposase IS66 ILR76_15140 PF04715 Anthranilate synthase component I, N terminal region ILR76_15140 PF00425 chorismate binding enzyme ILR76_15145 PF00155 Aminotransferase class I and II ILR76_15150 PF00815 Histidinol dehydrogenase ILR76_15155 PF01634 ATP phosphoribosyltransferase ILR76_15160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILR76_15165 PF01722 BolA-like protein ILR76_15170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILR76_15175 PF00309 Sigma-54 factor, Activator interacting domain (AID) ILR76_15175 PF04963 Sigma-54 factor, core binding domain ILR76_15175 PF04552 Sigma-54, DNA binding domain ILR76_15220 PF00795 Carbon-nitrogen hydrolase ILR76_15230 PF01047 MarR family ILR76_15235 PF02566 OsmC-like protein ILR76_15240 PF00437 Type II/IV secretion system protein ILR76_15260 PF01367 5'-3' exonuclease, C-terminal SAM fold ILR76_15260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILR76_15260 PF00476 DNA polymerase family A ILR76_15260 PF01612 3'-5' exonuclease ILR76_15265 PF02325 YGGT family ILR76_15270 PF03807 NADP oxidoreductase coenzyme F420-dependent ILR76_15270 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILR76_15275 PF11734 TilS substrate C-terminal domain ILR76_15275 PF09179 TilS substrate binding domain ILR76_15275 PF01171 PP-loop family ILR76_15280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ILR76_15285 PF02541 Ppx/GppA phosphatase family ILR76_15290 PF00085 Thioredoxin ILR76_15295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR76_15295 PF07498 Rho termination factor, N-terminal domain ILR76_15295 PF07497 Rho termination factor, RNA-binding domain ILR76_15310 PF00216 Bacterial DNA-binding protein ILR76_15315 PF03483 B3/4 domain ILR76_15315 PF03484 tRNA synthetase B5 domain ILR76_15315 PF03147 Ferredoxin-fold anticodon binding domain ILR76_15315 PF01588 Putative tRNA binding domain ILR76_15315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ILR76_15320 PF01409 tRNA synthetases class II core domain (F) ILR76_15320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ILR76_15340 PF00453 Ribosomal protein L20 ILR76_15345 PF01632 Ribosomal protein L35 ILR76_15350 PF07690 Major Facilitator Superfamily ILR76_15355 PF09335 SNARE associated Golgi protein ILR76_15360 PF02798 Glutathione S-transferase, N-terminal domain ILR76_15360 PF00043 Glutathione S-transferase, C-terminal domain ILR76_15365 PF00707 Translation initiation factor IF-3, C-terminal domain ILR76_15365 PF05198 Translation initiation factor IF-3, N-terminal domain ILR76_15370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR76_15370 PF02824 TGS domain ILR76_15370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILR76_15370 PF03129 Anticodon binding domain ILR76_15375 PF13193 AMP-binding enzyme C-terminal domain ILR76_15375 PF00501 AMP-binding enzyme ILR76_15380 PF04751 Protein of unknown function (DUF615) ILR76_15385 PF00381 PTS HPr component phosphorylation site ILR76_15390 PF03668 P-loop ATPase protein family ILR76_15395 PF02569 Pantoate-beta-alanine ligase ILR76_15400 PF02548 Ketopantoate hydroxymethyltransferase ILR76_15405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ILR76_15410 PF12626 Polymerase A arginine-rich C-terminus ILR76_15410 PF12627 Probable RNA and SrmB- binding site of polymerase A ILR76_15410 PF01743 Poly A polymerase head domain ILR76_15420 PF03819 MazG nucleotide pyrophosphohydrolase domain ILR76_15430 PF13291 ACT domain ILR76_15430 PF02824 TGS domain ILR76_15430 PF04607 Region found in RelA / SpoT proteins ILR76_15435 PF05958 tRNA (Uracil-5-)-methyltransferase ILR76_15445 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_15450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ILR76_15450 PF00072 Response regulator receiver domain ILR76_15450 PF01627 Hpt domain ILR76_15450 PF00672 HAMP domain ILR76_15450 PF00512 His Kinase A (phospho-acceptor) domain ILR76_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_15455 PF00378 Enoyl-CoA hydratase/isomerase ILR76_15460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR76_15460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR76_15465 PF01261 Xylose isomerase-like TIM barrel ILR76_15475 PF00106 short chain dehydrogenase ILR76_15480 PF02233 NAD(P) transhydrogenase beta subunit ILR76_15485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ILR76_15490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ILR76_15490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ILR76_15515 PF07690 Major Facilitator Superfamily ILR76_15520 PF01207 Dihydrouridine synthase (Dus) ILR76_15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_15530 PF03466 LysR substrate binding domain ILR76_15540 PF00899 ThiF family ILR76_15550 PF00330 Aconitase family (aconitate hydratase) ILR76_15550 PF00694 Aconitase C-terminal domain ILR76_15555 PF01026 TatD related DNase ILR76_15570 PF00009 Elongation factor Tu GTP binding domain ILR76_15570 PF03144 Elongation factor Tu domain 2 ILR76_15570 PF16658 Class II release factor RF3, C-terminal domain ILR76_15590 PF03707 Bacterial signalling protein N terminal repeat ILR76_15590 PF00990 Diguanylate cyclase, GGDEF domain ILR76_15590 PF00563 EAL domain ILR76_15595 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ILR76_15595 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ILR76_15600 PF10369 Small subunit of acetolactate synthase ILR76_15605 PF00205 Thiamine pyrophosphate enzyme, central domain ILR76_15605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR76_15605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR76_15615 PF13603 Leucyl-tRNA synthetase, Domain 2 ILR76_15615 PF08264 Anticodon-binding domain of tRNA ILR76_15615 PF00133 tRNA synthetases class I (I, L, M and V) ILR76_15615 PF09334 tRNA synthetases class I (M) ILR76_15630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR76_15635 PF00005 ABC transporter ILR76_15635 PF02687 FtsX-like permease family ILR76_15635 PF12704 MacB-like periplasmic core domain ILR76_15640 PF02321 Outer membrane efflux protein ILR76_15655 PF00929 Exonuclease ILR76_15660 PF03193 RsgA GTPase ILR76_15670 PF00462 Glutaredoxin ILR76_15675 PF02556 Preprotein translocase subunit SecB ILR76_15690 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_15690 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_15705 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_15705 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_15715 PF04820 Tryptophan halogenase ILR76_15735 PF00221 Aromatic amino acid lyase ILR76_15750 PF00501 AMP-binding enzyme ILR76_15750 PF13193 AMP-binding enzyme C-terminal domain ILR76_15760 PF00550 Phosphopantetheine attachment site ILR76_15765 PF00550 Phosphopantetheine attachment site ILR76_15780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ILR76_15780 PF01926 50S ribosome-binding GTPase ILR76_15785 PF13360 PQQ-like domain ILR76_15795 PF13393 Histidyl-tRNA synthetase ILR76_15795 PF03129 Anticodon binding domain ILR76_15800 PF04551 GcpE protein ILR76_15805 PF13464 Domain of unknown function (DUF4115) ILR76_15815 PF04055 Radical SAM superfamily ILR76_15820 PF00334 Nucleoside diphosphate kinase ILR76_15825 PF04384 Iron-sulphur cluster assembly ILR76_15830 PF01569 PAP2 superfamily ILR76_15835 PF00534 Glycosyl transferases group 1 ILR76_15835 PF13439 Glycosyltransferase Family 4 ILR76_15840 PF17804 Tail specific protease N-terminal domain ILR76_15840 PF03572 Peptidase family S41 ILR76_15840 PF00595 PDZ domain ILR76_15840 PF11818 C-terminal domain of tail specific protease (DUF3340) ILR76_15845 PF00933 Glycosyl hydrolase family 3 N terminal domain ILR76_15855 PF00561 alpha/beta hydrolase fold ILR76_15860 PF00171 Aldehyde dehydrogenase family ILR76_15865 PF00171 Aldehyde dehydrogenase family ILR76_15870 PF01202 Shikimate kinase ILR76_15875 PF02447 GntP family permease ILR76_15880 PF01081 KDPG and KHG aldolase ILR76_15885 PF00920 Dehydratase family ILR76_15890 PF00871 Acetokinase family ILR76_15895 PF07085 DRTGG domain ILR76_15895 PF01515 Phosphate acetyl/butaryl transferase ILR76_15900 PF05681 Fumarate hydratase (Fumerase) ILR76_15900 PF05683 Fumarase C-terminus ILR76_15915 PF07724 AAA domain (Cdc48 subfamily) ILR76_15915 PF10431 C-terminal, D2-small domain, of ClpB protein ILR76_15915 PF06689 ClpX C4-type zinc finger ILR76_15920 PF00574 Clp protease ILR76_15925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_15925 PF05698 Bacterial trigger factor protein (TF) C-terminus ILR76_15925 PF05697 Bacterial trigger factor protein (TF) ILR76_15930 PF07715 TonB-dependent Receptor Plug Domain ILR76_15930 PF00593 TonB dependent receptor ILR76_15935 PF18331 PKHD-type hydroxylase C-terminal domain ILR76_15935 PF13640 2OG-Fe(II) oxygenase superfamily ILR76_15940 PF00682 HMGL-like ILR76_15940 PF08502 LeuA allosteric (dimerisation) domain ILR76_15945 PF00561 alpha/beta hydrolase fold ILR76_15950 PF00561 alpha/beta hydrolase fold ILR76_15950 PF07021 Methionine biosynthesis protein MetW ILR76_15960 PF01725 Ham1 family ILR76_15970 PF02416 mttA/Hcf106 family ILR76_15975 PF02416 mttA/Hcf106 family ILR76_15980 PF00902 Sec-independent protein translocase protein (TatC) ILR76_16000 PF01790 Prolipoprotein diacylglyceryl transferase ILR76_16015 PF00303 Thymidylate synthase ILR76_16020 PF00186 Dihydrofolate reductase ILR76_16030 PF01625 Peptide methionine sulfoxide reductase ILR76_16040 PF01618 MotA/TolQ/ExbB proton channel family ILR76_16050 PF01842 ACT domain ILR76_16050 PF00551 Formyl transferase ILR76_16060 PF00171 Aldehyde dehydrogenase family ILR76_16065 PF00830 Ribosomal L28 family ILR76_16070 PF00471 Ribosomal protein L33 ILR76_16075 PF02254 TrkA-N domain ILR76_16075 PF00999 Sodium/hydrogen exchanger family ILR76_16095 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ILR76_16100 PF00580 UvrD/REP helicase N-terminal domain ILR76_16100 PF13361 UvrD-like helicase C-terminal domain ILR76_16115 PF08272 Topoisomerase I zinc-ribbon-like ILR76_16115 PF01131 DNA topoisomerase ILR76_16115 PF01396 Topoisomerase DNA binding C4 zinc finger ILR76_16115 PF01751 Toprim domain ILR76_16125 PF01638 HxlR-like helix-turn-helix ILR76_16130 PF08240 Alcohol dehydrogenase GroES-like domain ILR76_16130 PF00107 Zinc-binding dehydrogenase ILR76_16135 PF04102 SlyX ILR76_16140 PF00005 ABC transporter ILR76_16140 PF12848 ABC transporter ILR76_16140 PF16326 ABC transporter C-terminal domain ILR76_16145 PF01810 LysE type translocator ILR76_16150 PF03279 Bacterial lipid A biosynthesis acyltransferase ILR76_16160 PF00375 Sodium:dicarboxylate symporter family ILR76_16170 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILR76_16170 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILR76_16190 PF01416 tRNA pseudouridine synthase ILR76_16200 PF01176 Translation initiation factor 1A / IF-1 ILR76_16215 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR76_16225 PF00694 Aconitase C-terminal domain ILR76_16230 PF00330 Aconitase family (aconitate hydratase) ILR76_16240 PF03466 LysR substrate binding domain ILR76_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_16260 PF00293 NUDIX domain ILR76_16265 PF01590 GAF domain ILR76_16265 PF05524 PEP-utilising enzyme, N-terminal ILR76_16265 PF00391 PEP-utilising enzyme, mobile domain ILR76_16265 PF02896 PEP-utilising enzyme, TIM barrel domain ILR76_16270 PF00141 Peroxidase ILR76_16275 PF12706 Beta-lactamase superfamily domain ILR76_16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_16280 PF03466 LysR substrate binding domain ILR76_16290 PF02798 Glutathione S-transferase, N-terminal domain ILR76_16295 PF13280 WYL domain ILR76_16295 PF08279 HTH domain ILR76_16300 PF13419 Haloacid dehalogenase-like hydrolase ILR76_16305 PF00849 RNA pseudouridylate synthase ILR76_16305 PF01479 S4 domain ILR76_16310 PF12111 Polyribonucleotide phosphorylase C terminal ILR76_16310 PF10150 Ribonuclease E/G family ILR76_16310 PF00575 S1 RNA binding domain ILR76_16315 PF00501 AMP-binding enzyme ILR76_16315 PF13193 AMP-binding enzyme C-terminal domain ILR76_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR76_16330 PF03466 LysR substrate binding domain ILR76_16335 PF00106 short chain dehydrogenase ILR76_16340 PF06969 HemN C-terminal domain ILR76_16340 PF04055 Radical SAM superfamily ILR76_16350 PF01554 MatE ILR76_16355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_16355 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_16355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR76_16360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_16360 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR76_16365 PF03109 ABC1 family ILR76_16370 PF01197 Ribosomal protein L31 ILR76_16385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ILR76_16405 PF03884 DNA gyrase inhibitor YacG ILR76_16410 PF00753 Metallo-beta-lactamase superfamily ILR76_16415 PF00762 Ferrochelatase ILR76_16425 PF01177 Asp/Glu/Hydantoin racemase ILR76_16440 PF01206 Sulfurtransferase TusA ILR76_16445 PF00571 CBS domain ILR76_16445 PF03471 Transporter associated domain ILR76_16450 PF00795 Carbon-nitrogen hydrolase ILR76_16455 PF01588 Putative tRNA binding domain ILR76_16465 PF07963 Prokaryotic N-terminal methylation motif ILR76_16465 PF08334 Type II secretion system (T2SS), protein G ILR76_16470 PF00482 Type II secretion system (T2SS), protein F ILR76_16475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ILR76_16475 PF00270 DEAD/DEAH box helicase ILR76_16475 PF00271 Helicase conserved C-terminal domain ILR76_16475 PF17764 3′ DNA-binding domain (3′BD) ILR76_16475 PF18074 Primosomal protein N C-terminal domain ILR76_16480 PF00999 Sodium/hydrogen exchanger family ILR76_16480 PF02254 TrkA-N domain ILR76_16485 PF01430 Hsp33 protein ILR76_16495 PF00226 DnaJ domain ILR76_16495 PF01556 DnaJ C terminal domain ILR76_16505 PF01544 CorA-like Mg2+ transporter protein ILR76_16510 PF00013 KH domain ILR76_16510 PF01138 3' exoribonuclease family, domain 1 ILR76_16510 PF03725 3' exoribonuclease family, domain 2 ILR76_16510 PF00575 S1 RNA binding domain ILR76_16510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ILR76_16515 PF00312 Ribosomal protein S15 ILR76_16520 PF00144 Beta-lactamase ILR76_16525 PF13538 UvrD-like helicase C-terminal domain ILR76_16530 PF12705 PD-(D/E)XK nuclease superfamily ILR76_16530 PF00580 UvrD/REP helicase N-terminal domain ILR76_16530 PF13361 UvrD-like helicase C-terminal domain ILR76_16535 PF17946 RecC C-terminal domain ILR76_16545 PF03976 Polyphosphate kinase 2 (PPK2) ILR76_16555 PF01209 ubiE/COQ5 methyltransferase family ILR76_16565 PF03109 ABC1 family ILR76_16570 PF01494 FAD binding domain ILR76_16575 PF01502 Phosphoribosyl-AMP cyclohydrolase ILR76_16590 PF00361 Proton-conducting membrane transporter ILR76_16590 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ILR76_16590 PF13244 Domain of unknown function (DUF4040) ILR76_16590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILR76_16595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILR76_16600 PF00361 Proton-conducting membrane transporter ILR76_16605 PF01899 Na+/H+ ion antiporter subunit ILR76_16610 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ILR76_16615 PF03334 Na+/H+ antiporter subunit ILR76_16620 PF02033 Ribosome-binding factor A ILR76_16625 PF00009 Elongation factor Tu GTP binding domain ILR76_16625 PF11987 Translation-initiation factor 2 ILR76_16625 PF08364 Bacterial translation initiation factor IF-2 associated region ILR76_16625 PF04760 Translation initiation factor IF-2, N-terminal region ILR76_16630 PF13184 NusA-like KH domain ILR76_16630 PF08529 NusA N-terminal domain ILR76_16630 PF00575 S1 RNA binding domain ILR76_16635 PF02576 RimP N-terminal domain ILR76_16635 PF17384 RimP C-terminal SH3 domain ILR76_16655 PF03840 Preprotein translocase SecG subunit ILR76_16660 PF00121 Triosephosphate isomerase ILR76_16665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILR76_16665 PF00437 Type II/IV secretion system protein ILR76_16670 PF00482 Type II secretion system (T2SS), protein F ILR76_16675 PF06750 Bacterial Peptidase A24 N-terminal domain ILR76_16675 PF01478 Type IV leader peptidase family ILR76_16680 PF01121 Dephospho-CoA kinase ILR76_16690 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILR76_16690 PF00588 SpoU rRNA Methylase family ILR76_16695 PF06865 Pyrimidine/purine nucleoside phosphorylase ILR76_16705 PF02463 RecF/RecN/SMC N terminal domain ILR76_16710 PF02622 Uncharacterized ACR, COG1678 ILR76_16715 PF03652 Holliday junction resolvase ILR76_16720 PF13533 Biotin-lipoyl like ILR76_16745 PF02805 Metal binding domain of Ada ILR76_16745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR76_16745 PF12833 Helix-turn-helix domain ILR76_16745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILR76_16750 PF01066 CDP-alcohol phosphatidyltransferase ILR76_16760 PF02151 UvrB/uvrC motif ILR76_16760 PF01541 GIY-YIG catalytic domain ILR76_16760 PF08459 UvrC Helix-hairpin-helix N-terminal ILR76_16780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR76_16780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR76_16780 PF00378 Enoyl-CoA hydratase/isomerase ILR76_16785 PF02803 Thiolase, C-terminal domain ILR76_16785 PF00108 Thiolase, N-terminal domain ILR76_16805 PF09278 MerR, DNA binding ILR76_16805 PF00376 MerR family regulatory protein ILR76_16815 PF01323 DSBA-like thioredoxin domain ILR76_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_16830 PF00183 Hsp90 protein ILR76_16845 PF03553 Na+/H+ antiporter family ILR76_16845 PF13726 Na+-H+ antiporter family ILR76_16850 PF00561 alpha/beta hydrolase fold ILR76_16875 PF04997 RNA polymerase Rpb1, domain 1 ILR76_16875 PF04983 RNA polymerase Rpb1, domain 3 ILR76_16875 PF05000 RNA polymerase Rpb1, domain 4 ILR76_16875 PF04998 RNA polymerase Rpb1, domain 5 ILR76_16875 PF00623 RNA polymerase Rpb1, domain 2 ILR76_16880 PF04563 RNA polymerase beta subunit ILR76_16880 PF04561 RNA polymerase Rpb2, domain 2 ILR76_16880 PF04565 RNA polymerase Rpb2, domain 3 ILR76_16880 PF10385 RNA polymerase beta subunit external 1 domain ILR76_16880 PF00562 RNA polymerase Rpb2, domain 6 ILR76_16880 PF04560 RNA polymerase Rpb2, domain 7 ILR76_16885 PF16320 Ribosomal protein L7/L12 dimerisation domain ILR76_16885 PF00542 Ribosomal protein L7/L12 C-terminal domain ILR76_16890 PF00466 Ribosomal protein L10 ILR76_16895 PF00687 Ribosomal protein L1p/L10e family ILR76_16900 PF00298 Ribosomal protein L11, RNA binding domain ILR76_16900 PF03946 Ribosomal protein L11, N-terminal domain ILR76_16905 PF00467 KOW motif ILR76_16905 PF02357 Transcription termination factor nusG ILR76_16910 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ILR76_16920 PF00009 Elongation factor Tu GTP binding domain ILR76_16920 PF03143 Elongation factor Tu C-terminal domain ILR76_16920 PF03144 Elongation factor Tu domain 2 ILR76_16945 PF00425 chorismate binding enzyme ILR76_16945 PF04715 Anthranilate synthase component I, N terminal region ILR76_16950 PF13419 Haloacid dehalogenase-like hydrolase ILR76_16955 PF00498 FHA domain ILR76_16955 PF12401 Protein of unknown function (DUF2662) ILR76_16960 PF00263 Bacterial type II and III secretion system protein ILR76_16960 PF03958 Bacterial type II/III secretion system short domain ILR76_16975 PF00816 H-NS histone family ILR76_17000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ILR76_17000 PF03900 Porphobilinogen deaminase, C-terminal domain ILR76_17005 PF04397 LytTr DNA-binding domain ILR76_17005 PF00072 Response regulator receiver domain ILR76_17010 PF07694 5TMR of 5TMR-LYT ILR76_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_17010 PF06580 Histidine kinase ILR76_17015 PF00206 Lyase ILR76_17015 PF14698 Argininosuccinate lyase C-terminal ILR76_17020 PF04362 Bacterial Fe(2+) trafficking ILR76_17025 PF01895 PhoU domain ILR76_17030 PF02321 Outer membrane efflux protein ILR76_17035 PF00892 EamA-like transporter family ILR76_17050 PF13667 ThiC-associated domain ILR76_17050 PF01964 Radical SAM ThiC family ILR76_17055 PF00293 NUDIX domain ILR76_17060 PF00149 Calcineurin-like phosphoesterase ILR76_17065 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILR76_17070 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR76_17075 PF01098 Cell cycle protein ILR76_17080 PF08245 Mur ligase middle domain ILR76_17080 PF02875 Mur ligase family, glutamate ligase domain ILR76_17090 PF07670 Nucleoside recognition ILR76_17090 PF02421 Ferrous iron transport protein B ILR76_17090 PF07664 Ferrous iron transport protein B C terminus ILR76_17100 PF02899 Phage integrase, N-terminal SAM-like domain ILR76_17100 PF00589 Phage integrase family ILR76_17110 PF13936 Helix-turn-helix domain ILR76_17110 PF00665 Integrase core domain ILR76_17120 PF00742 Homoserine dehydrogenase ILR76_17120 PF03447 Homoserine dehydrogenase, NAD binding domain ILR76_17120 PF01842 ACT domain ILR76_17125 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_17130 PF00768 D-alanyl-D-alanine carboxypeptidase ILR76_17135 PF00196 Bacterial regulatory proteins, luxR family ILR76_17135 PF00072 Response regulator receiver domain ILR76_17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR76_17140 PF00512 His Kinase A (phospho-acceptor) domain ILR76_17145 PF02954 Bacterial regulatory protein, Fis family ILR76_17145 PF00072 Response regulator receiver domain ILR76_17145 PF00158 Sigma-54 interaction domain ILR76_17150 PF03572 Peptidase family S41 ILR76_17150 PF00595 PDZ domain ILR76_17155 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ILR76_17155 PF01676 Metalloenzyme superfamily ILR76_17160 PF03739 Lipopolysaccharide export system permease LptF/LptG ILR76_17170 PF00883 Cytosol aminopeptidase family, catalytic domain ILR76_17170 PF02789 Cytosol aminopeptidase family, N-terminal domain ILR76_17190 PF00677 Lumazine binding domain ILR76_17200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILR76_17200 PF01872 RibD C-terminal domain ILR76_17205 PF03477 ATP cone domain ILR76_17210 PF00909 Ammonium Transporter Family ILR76_17215 PF00543 Nitrogen regulatory protein P-II ILR76_17225 PF01078 Magnesium chelatase, subunit ChlI ILR76_17225 PF13335 Magnesium chelatase, subunit ChlI C-terminal ILR76_17230 PF00155 Aminotransferase class I and II ILR76_17230 PF00392 Bacterial regulatory proteins, gntR family ILR76_17240 PF00701 Dihydrodipicolinate synthetase family ILR76_17255 PF03573 outer membrane porin, OprD family ILR76_17260 PF00719 Inorganic pyrophosphatase ILR76_17275 PF00501 AMP-binding enzyme ILR76_17275 PF13193 AMP-binding enzyme C-terminal domain ILR76_17280 PF03989 DNA gyrase C-terminal domain, beta-propeller ILR76_17280 PF00521 DNA gyrase/topoisomerase IV, subunit A ILR76_17285 PF07690 Major Facilitator Superfamily ILR76_17290 PF03458 UPF0126 domain ILR76_17295 PF02810 SEC-C motif ILR76_17300 PF03471 Transporter associated domain ILR76_17300 PF03741 Integral membrane protein TerC family ILR76_17305 PF03641 Possible lysine decarboxylase ILR76_17310 PF07690 Major Facilitator Superfamily ILR76_17320 PF11798 IMS family HHH motif ILR76_17320 PF11799 impB/mucB/samB family C-terminal domain ILR76_17320 PF00817 impB/mucB/samB family ILR76_17335 PF11842 Domain of unknown function (DUF3362) ILR76_17335 PF04055 Radical SAM superfamily ILR76_17335 PF08497 Radical SAM N-terminal ILR76_17355 PF03358 NADPH-dependent FMN reductase ILR76_17365 PF00291 Pyridoxal-phosphate dependent enzyme ILR76_17400 PF00440 Bacterial regulatory proteins, tetR family ILR76_17425 PF01327 Polypeptide deformylase ILR76_17435 PF02481 DNA recombination-mediator protein A ILR76_17435 PF17782 DprA winged helix domain ILR76_17440 PF01300 Telomere recombination ILR76_17445 PF00892 EamA-like transporter family ILR76_17450 PF00440 Bacterial regulatory proteins, tetR family ILR76_17455 PF07690 Major Facilitator Superfamily ILR76_17465 PF00255 Glutathione peroxidase ILR76_17475 PF11008 Protein of unknown function (DUF2846) ILR76_17480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ILR76_17485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR76_17485 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILR76_17490 PF00231 ATP synthase ILR76_17495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR76_17495 PF00306 ATP synthase alpha/beta chain, C terminal domain ILR76_17495 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILR76_17500 PF00213 ATP synthase delta (OSCP) subunit ILR76_17505 PF00430 ATP synthase B/B' CF(0) ILR76_17510 PF00137 ATP synthase subunit C ILR76_17515 PF00119 ATP synthase A chain ILR76_17535 PF00005 ABC transporter ILR76_17540 PF00950 ABC 3 transport family ILR76_17545 PF01810 LysE type translocator ILR76_17550 PF04261 Dyp-type peroxidase family ILR76_17555 PF03949 Malic enzyme, NAD binding domain ILR76_17555 PF00390 Malic enzyme, N-terminal domain ILR76_17560 PF05746 DALR anticodon binding domain ILR76_17560 PF00750 tRNA synthetases class I (R) ILR76_17560 PF03485 Arginyl tRNA synthetase N terminal domain ILR76_17580 PF02678 Pirin ILR76_17580 PF05726 Pirin C-terminal cupin domain ILR76_17590 PF03551 Transcriptional regulator PadR-like family ILR76_17610 PF00117 Glutamine amidotransferase class-I ILR76_17610 PF00958 GMP synthase C terminal domain ILR76_17610 PF02540 NAD synthase ILR76_17615 PF04286 Protein of unknown function (DUF445) ILR76_17620 PF07681 DoxX ILR76_17625 PF09335 SNARE associated Golgi protein ILR76_17640 PF13614 AAA domain ILR76_17650 PF01722 BolA-like protein ILR76_17665 PF01648 4'-phosphopantetheinyl transferase superfamily ILR76_17670 PF16363 GDP-mannose 4,6 dehydratase ILR76_17685 PF00501 AMP-binding enzyme ILR76_17685 PF13193 AMP-binding enzyme C-terminal domain ILR76_17685 PF00668 Condensation domain ILR76_17685 PF00550 Phosphopantetheine attachment site ILR76_17685 PF00975 Thioesterase domain ILR76_17690 PF14765 Polyketide synthase dehydratase ILR76_17690 PF00975 Thioesterase domain ILR76_17690 PF08242 Methyltransferase domain ILR76_17690 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR76_17690 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR76_17690 PF00550 Phosphopantetheine attachment site ILR76_17690 PF16197 Ketoacyl-synthetase C-terminal extension ILR76_17695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_17695 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_17695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_17700 PF00501 AMP-binding enzyme ILR76_17705 PF03472 Autoinducer binding domain ILR76_17705 PF00196 Bacterial regulatory proteins, luxR family ILR76_17715 PF00765 Autoinducer synthase ILR76_17720 PF00083 Sugar (and other) transporter ILR76_17720 PF07690 Major Facilitator Superfamily ILR76_17725 PF00378 Enoyl-CoA hydratase/isomerase ILR76_17730 PF00378 Enoyl-CoA hydratase/isomerase ILR76_17735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR76_17735 PF02770 Acyl-CoA dehydrogenase, middle domain ILR76_17735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR76_17740 PF13193 AMP-binding enzyme C-terminal domain ILR76_17740 PF00501 AMP-binding enzyme ILR76_17745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR76_17745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR76_17750 PF00171 Aldehyde dehydrogenase family ILR76_17760 PF00324 Amino acid permease ILR76_17765 PF00324 Amino acid permease ILR76_17770 PF01042 Endoribonuclease L-PSP ILR76_17775 PF00842 Alanine racemase, C-terminal domain ILR76_17775 PF01168 Alanine racemase, N-terminal domain ILR76_17780 PF01266 FAD dependent oxidoreductase ILR76_17785 PF01037 Lrp/AsnC ligand binding domain ILR76_17795 PF07715 TonB-dependent Receptor Plug Domain ILR76_17795 PF00593 TonB dependent receptor ILR76_17810 PF00849 RNA pseudouridylate synthase ILR76_17855 PF00694 Aconitase C-terminal domain ILR76_17855 PF00330 Aconitase family (aconitate hydratase) ILR76_17860 PF00285 Citrate synthase, C-terminal domain ILR76_17870 PF00392 Bacterial regulatory proteins, gntR family ILR76_17870 PF07729 FCD domain ILR76_17880 PF00155 Aminotransferase class I and II ILR76_17885 PF01565 FAD binding domain ILR76_17885 PF09330 D-lactate dehydrogenase, membrane binding ILR76_17890 PF01070 FMN-dependent dehydrogenase ILR76_17895 PF07729 FCD domain ILR76_17895 PF00392 Bacterial regulatory proteins, gntR family ILR76_17900 PF02652 L-lactate permease ILR76_17905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR76_17905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR76_17905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR76_17905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR76_17915 PF16363 GDP-mannose 4,6 dehydratase ILR76_17920 PF00342 Phosphoglucose isomerase ILR76_17925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILR76_17925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILR76_17925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILR76_17930 PF00483 Nucleotidyl transferase ILR76_17935 PF02397 Bacterial sugar transferase ILR76_17940 PF00535 Glycosyl transferase family 2 ILR76_17945 PF00534 Glycosyl transferases group 1 ILR76_17960 PF13439 Glycosyltransferase Family 4 ILR76_17960 PF00534 Glycosyl transferases group 1 ILR76_17965 PF12464 Maltose acetyltransferase ILR76_17965 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_17965 PF14602 Hexapeptide repeat of succinyl-transferase ILR76_17975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILR76_17980 PF00132 Bacterial transferase hexapeptide (six repeats) ILR76_17985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILR76_17985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILR76_17990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILR76_17990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILR76_17990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILR76_17995 PF10531 SLBB domain ILR76_17995 PF02563 Polysaccharide biosynthesis/export protein ILR76_17995 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILR76_18000 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILR76_18005 PF13807 G-rich domain on putative tyrosine kinase ILR76_18005 PF02706 Chain length determinant protein ILR76_18005 PF13614 AAA domain ILR76_18010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_18010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILR76_18015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_18015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILR76_18020 PF03023 Lipid II flippase MurJ ILR76_18025 PF01510 N-acetylmuramoyl-L-alanine amidase ILR76_18030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILR76_18030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILR76_18040 PF05506 Domain of unknown function (DUF756) ILR76_18040 PF04185 Phosphoesterase family ILR76_18045 PF01138 3' exoribonuclease family, domain 1 ILR76_18045 PF03725 3' exoribonuclease family, domain 2 ILR76_18050 PF00487 Fatty acid desaturase ILR76_18055 PF00175 Oxidoreductase NAD-binding domain ILR76_18060 PF00440 Bacterial regulatory proteins, tetR family ILR76_18065 PF00440 Bacterial regulatory proteins, tetR family ILR76_18065 PF08360 QacR-like protein, C-terminal region ILR76_18070 PF01323 DSBA-like thioredoxin domain ILR76_18080 PF13419 Haloacid dehalogenase-like hydrolase ILR76_18085 PF00106 short chain dehydrogenase ILR76_18100 PF00696 Amino acid kinase family ILR76_18100 PF00583 Acetyltransferase (GNAT) family ILR76_18105 PF09084 NMT1/THI5 like ILR76_18110 PF09084 NMT1/THI5 like ILR76_18115 PF00296 Luciferase-like monooxygenase ILR76_18120 PF00528 Binding-protein-dependent transport system inner membrane component ILR76_18125 PF00005 ABC transporter ILR76_18130 PF08362 YcdC-like protein, C-terminal region ILR76_18130 PF00440 Bacterial regulatory proteins, tetR family ILR76_18135 PF01048 Phosphorylase superfamily ILR76_18145 PF01687 Riboflavin kinase ILR76_18145 PF06574 FAD synthetase ILR76_18150 PF06827 Zinc finger found in FPG and IleRS ILR76_18150 PF00133 tRNA synthetases class I (I, L, M and V) ILR76_18150 PF08264 Anticodon-binding domain of tRNA ILR76_18155 PF01252 Signal peptidase (SPase) II ILR76_18160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR76_18200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILR76_18205 PF07859 alpha/beta hydrolase fold ILR76_18230 PF01025 GrpE ILR76_18235 PF00012 Hsp70 protein ILR76_18255 PF13406 Transglycosylase SLT domain ILR76_18260 PF02222 ATP-grasp domain ILR76_18260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ILR76_18265 PF00731 AIR carboxylase ILR76_18275 PF08245 Mur ligase middle domain ILR76_18275 PF02875 Mur ligase family, glutamate ligase domain ILR76_18275 PF01225 Mur ligase family, catalytic domain ILR76_18285 PF01569 PAP2 superfamily ILR76_18290 PF03741 Integral membrane protein TerC family ILR76_18300 PF03738 Glutathionylspermidine synthase preATP-grasp ILR76_18305 PF00355 Rieske [2Fe-2S] domain ILR76_18310 PF01979 Amidohydrolase family ILR76_18315 PF00156 Phosphoribosyl transferase domain ILR76_18325 PF10411 Disulfide bond isomerase protein N-terminus ILR76_18325 PF13098 Thioredoxin-like domain ILR76_18330 PF01545 Cation efflux family ILR76_18330 PF16916 Dimerisation domain of Zinc Transporter ILR76_18335 PF02583 Metal-sensitive transcriptional repressor ILR76_18340 PF01926 50S ribosome-binding GTPase ILR76_18340 PF10396 GTP-binding protein TrmE N-terminus ILR76_18340 PF12631 MnmE helical domain ILR76_18345 PF02096 60Kd inner membrane protein ILR76_18345 PF14849 YidC periplasmic domain ILR76_18350 PF01809 Putative membrane protein insertion efficiency factor ILR76_18355 PF00825 Ribonuclease P ILR76_18360 PF00468 Ribosomal protein L34 ILR76_18415 PF00565 Staphylococcal nuclease homologue ILR76_18425 PF00905 Penicillin binding protein transpeptidase domain ILR76_18435 PF00816 H-NS histone family ILR76_18485 PF13614 AAA domain ILR76_18490 PF02195 ParB-like nuclease domain ILR76_18490 PF17762 HTH domain found in ParB protein ILR76_18505 PF05816 Toxic anion resistance protein (TelA) ILR76_18600 PF00684 DnaJ central domain ILR76_18600 PF01556 DnaJ C terminal domain ILR76_18600 PF00226 DnaJ domain ILR76_18635 PF08751 TrwC relaxase ILR76_18635 PF07057 DNA helicase TraI ILR76_18635 PF18272 single-stranded DNA binding TraI N-terminal subdomain ILR76_18635 PF18340 DNA relaxase TraI 2B/2B-like domain ILR76_18660 PF13936 Helix-turn-helix domain ILR76_18660 PF00665 Integrase core domain ILR76_18665 PF13936 Helix-turn-helix domain ILR76_18665 PF00665 Integrase core domain ILR76_18680 PF00239 Resolvase, N terminal domain ILR76_18680 PF02796 Helix-turn-helix domain of resolvase ILR76_18695 PF01464 Transglycosylase SLT domain ILR76_18730 PF10411 Disulfide bond isomerase protein N-terminus ILR76_18730 PF13098 Thioredoxin-like domain ILR76_18765 PF06834 TraU protein ILR76_18775 PF06986 Type-1V conjugative transfer system mating pair stabilisation ILR76_18790 PF06122 Conjugative relaxosome accessory transposon protein ILR76_18810 PF11798 IMS family HHH motif ILR76_18810 PF11799 impB/mucB/samB family C-terminal domain ILR76_18810 PF00817 impB/mucB/samB family ILR76_18810 PF13438 Domain of unknown function (DUF4113) ILR76_18865 PF00239 Resolvase, N terminal domain ILR76_18865 PF02796 Helix-turn-helix domain of resolvase ILR76_18890 PF00565 Staphylococcal nuclease homologue ILR76_19045 PF10412 Type IV secretion-system coupling protein DNA-binding domain ILR76_19045 PF12615 F sex factor protein N terminal ILR76_19050 PF18272 single-stranded DNA binding TraI N-terminal subdomain ILR76_19050 PF07057 DNA helicase TraI ILR76_19050 PF18340 DNA relaxase TraI 2B/2B-like domain ILR76_19050 PF08751 TrwC relaxase ILR76_19050 PF18272 single-stranded DNA binding TraI N-terminal subdomain ILR76_19050 PF07057 DNA helicase TraI ILR76_19050 PF18340 DNA relaxase TraI 2B/2B-like domain ILR76_19050 PF08751 TrwC relaxase ILR76_19100 PF03743 Bacterial conjugation TrbI-like protein ILR76_19105 PF13098 Thioredoxin-like domain ILR76_19105 PF10411 Disulfide bond isomerase protein N-terminus ILR76_19115 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer ILR76_19135 PF06834 TraU protein ILR76_19140 PF09673 Type-F conjugative transfer system pilin assembly protein ILR76_19145 PF06986 Type-1V conjugative transfer system mating pair stabilisation ILR76_19190 PF00816 H-NS histone family ILR76_19255 PF13614 AAA domain ILR76_19260 PF02195 ParB-like nuclease domain ILR76_19260 PF08535 KorB domain ILR76_19260 PF06613 KorB C-terminal beta-barrel domain ILR76_19280 PF01051 Initiator Replication protein ILR76_19310 PF07715 TonB-dependent Receptor Plug Domain ILR76_19310 PF00593 TonB dependent receptor ILR76_19320 PF13936 Helix-turn-helix domain ILR76_19320 PF00665 Integrase core domain