locus-tag class description ILR57_000005 PF00308 Bacterial dnaA protein ILR57_000005 PF08299 Bacterial dnaA protein helix-turn-helix ILR57_000005 PF11638 DnaA N-terminal domain ILR57_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain ILR57_000010 PF02767 DNA polymerase III beta subunit, central domain ILR57_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain ILR57_000015 PF02463 RecF/RecN/SMC N terminal domain ILR57_000020 PF01751 Toprim domain ILR57_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_000020 PF18053 DNA gyrase B subunit insert domain ILR57_000020 PF00986 DNA gyrase B subunit, carboxyl terminus ILR57_000020 PF00204 DNA gyrase B ILR57_000030 PF09335 SNARE associated Golgi protein ILR57_000035 PF00005 ABC transporter ILR57_000035 PF12848 ABC transporter ILR57_000055 PF01521 Iron-sulphur cluster biosynthesis ILR57_000060 PF00561 alpha/beta hydrolase fold ILR57_000065 PF03702 Anhydro-N-acetylmuramic acid kinase ILR57_000070 PF00579 tRNA synthetases class I (W and Y) ILR57_000110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_000115 PF01252 Signal peptidase (SPase) II ILR57_000120 PF08264 Anticodon-binding domain of tRNA ILR57_000120 PF00133 tRNA synthetases class I (I, L, M and V) ILR57_000120 PF06827 Zinc finger found in FPG and IleRS ILR57_000125 PF06574 FAD synthetase ILR57_000125 PF01687 Riboflavin kinase ILR57_000135 PF01048 Phosphorylase superfamily ILR57_000140 PF00440 Bacterial regulatory proteins, tetR family ILR57_000140 PF08362 YcdC-like protein, C-terminal region ILR57_000145 PF00005 ABC transporter ILR57_000150 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_000155 PF00296 Luciferase-like monooxygenase ILR57_000160 PF09084 NMT1/THI5 like ILR57_000165 PF09084 NMT1/THI5 like ILR57_000170 PF00696 Amino acid kinase family ILR57_000170 PF00583 Acetyltransferase (GNAT) family ILR57_000185 PF00106 short chain dehydrogenase ILR57_000190 PF13419 Haloacid dehalogenase-like hydrolase ILR57_000200 PF01323 DSBA-like thioredoxin domain ILR57_000205 PF00440 Bacterial regulatory proteins, tetR family ILR57_000205 PF08360 QacR-like protein, C-terminal region ILR57_000210 PF00440 Bacterial regulatory proteins, tetR family ILR57_000215 PF00175 Oxidoreductase NAD-binding domain ILR57_000215 PF00042 Globin ILR57_000215 PF00970 Oxidoreductase FAD-binding domain ILR57_000220 PF00487 Fatty acid desaturase ILR57_000225 PF03725 3' exoribonuclease family, domain 2 ILR57_000225 PF01138 3' exoribonuclease family, domain 1 ILR57_000235 PF05506 Domain of unknown function (DUF756) ILR57_000235 PF04185 Phosphoesterase family ILR57_000245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILR57_000245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILR57_000250 PF01510 N-acetylmuramoyl-L-alanine amidase ILR57_000255 PF03023 Lipid II flippase MurJ ILR57_000260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILR57_000260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_000265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILR57_000265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_000270 PF13614 AAA domain ILR57_000270 PF02706 Chain length determinant protein ILR57_000270 PF13807 G-rich domain on putative tyrosine kinase ILR57_000275 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILR57_000280 PF02563 Polysaccharide biosynthesis/export protein ILR57_000280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILR57_000280 PF10531 SLBB domain ILR57_000285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILR57_000285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILR57_000285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILR57_000290 PF01370 NAD dependent epimerase/dehydratase family ILR57_000305 PF13439 Glycosyltransferase Family 4 ILR57_000305 PF00534 Glycosyl transferases group 1 ILR57_000315 PF13477 Glycosyl transferase 4-like ILR57_000315 PF00534 Glycosyl transferases group 1 ILR57_000320 PF02397 Bacterial sugar transferase ILR57_000325 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_000325 PF14602 Hexapeptide repeat of succinyl-transferase ILR57_000325 PF17836 PglD N-terminal domain ILR57_000330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILR57_000335 PF02719 Polysaccharide biosynthesis protein ILR57_000340 PF00483 Nucleotidyl transferase ILR57_000345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILR57_000345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILR57_000345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILR57_000350 PF00342 Phosphoglucose isomerase ILR57_000355 PF16363 GDP-mannose 4,6 dehydratase ILR57_000360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR57_000360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR57_000360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR57_000360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR57_000365 PF02652 L-lactate permease ILR57_000370 PF00392 Bacterial regulatory proteins, gntR family ILR57_000370 PF07729 FCD domain ILR57_000375 PF01070 FMN-dependent dehydrogenase ILR57_000380 PF09330 D-lactate dehydrogenase, membrane binding ILR57_000380 PF01565 FAD binding domain ILR57_000385 PF00155 Aminotransferase class I and II ILR57_000395 PF07729 FCD domain ILR57_000395 PF00392 Bacterial regulatory proteins, gntR family ILR57_000405 PF00285 Citrate synthase, C-terminal domain ILR57_000410 PF00694 Aconitase C-terminal domain ILR57_000410 PF00330 Aconitase family (aconitate hydratase) ILR57_000430 PF00293 NUDIX domain ILR57_000460 PF00849 RNA pseudouridylate synthase ILR57_000475 PF07715 TonB-dependent Receptor Plug Domain ILR57_000475 PF00593 TonB dependent receptor ILR57_000485 PF01037 Lrp/AsnC ligand binding domain ILR57_000490 PF01266 FAD dependent oxidoreductase ILR57_000495 PF00842 Alanine racemase, C-terminal domain ILR57_000495 PF01168 Alanine racemase, N-terminal domain ILR57_000500 PF01042 Endoribonuclease L-PSP ILR57_000505 PF00324 Amino acid permease ILR57_000510 PF00324 Amino acid permease ILR57_000520 PF00171 Aldehyde dehydrogenase family ILR57_000525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR57_000525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR57_000530 PF13193 AMP-binding enzyme C-terminal domain ILR57_000530 PF00501 AMP-binding enzyme ILR57_000535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_000535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_000535 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_000540 PF00378 Enoyl-CoA hydratase/isomerase ILR57_000545 PF00378 Enoyl-CoA hydratase/isomerase ILR57_000550 PF07690 Major Facilitator Superfamily ILR57_000550 PF00083 Sugar (and other) transporter ILR57_000555 PF00765 Autoinducer synthase ILR57_000570 PF00501 AMP-binding enzyme ILR57_000575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_000575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_000575 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_000580 PF14765 Polyketide synthase dehydratase ILR57_000580 PF00975 Thioesterase domain ILR57_000580 PF16197 Ketoacyl-synthetase C-terminal extension ILR57_000580 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR57_000580 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR57_000580 PF08242 Methyltransferase domain ILR57_000580 PF00550 Phosphopantetheine attachment site ILR57_000600 PF12697 Alpha/beta hydrolase family ILR57_000605 PF01648 4'-phosphopantetheinyl transferase superfamily ILR57_000620 PF01722 BolA-like protein ILR57_000630 PF13614 AAA domain ILR57_000645 PF09335 SNARE associated Golgi protein ILR57_000650 PF07681 DoxX ILR57_000655 PF04286 Protein of unknown function (DUF445) ILR57_000660 PF00117 Glutamine amidotransferase class-I ILR57_000660 PF00958 GMP synthase C terminal domain ILR57_000660 PF02540 NAD synthase ILR57_000665 PF01909 Nucleotidyltransferase domain ILR57_000665 PF13427 Domain of unknown function (DUF4111) ILR57_000670 PF03551 Transcriptional regulator PadR-like family ILR57_000680 PF02678 Pirin ILR57_000680 PF05726 Pirin C-terminal cupin domain ILR57_000700 PF03485 Arginyl tRNA synthetase N terminal domain ILR57_000700 PF05746 DALR anticodon binding domain ILR57_000700 PF00750 tRNA synthetases class I (R) ILR57_000705 PF00390 Malic enzyme, N-terminal domain ILR57_000705 PF03949 Malic enzyme, NAD binding domain ILR57_000715 PF04261 Dyp-type peroxidase family ILR57_000720 PF01810 LysE type translocator ILR57_000725 PF00950 ABC 3 transport family ILR57_000730 PF00005 ABC transporter ILR57_000750 PF00119 ATP synthase A chain ILR57_000755 PF00137 ATP synthase subunit C ILR57_000760 PF00430 ATP synthase B/B' CF(0) ILR57_000765 PF00213 ATP synthase delta (OSCP) subunit ILR57_000770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR57_000770 PF00306 ATP synthase alpha/beta chain, C terminal domain ILR57_000770 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILR57_000775 PF00231 ATP synthase ILR57_000780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR57_000780 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILR57_000785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ILR57_000795 PF00255 Glutathione peroxidase ILR57_000805 PF07690 Major Facilitator Superfamily ILR57_000810 PF00440 Bacterial regulatory proteins, tetR family ILR57_000815 PF00892 EamA-like transporter family ILR57_000820 PF01300 Telomere recombination ILR57_000825 PF17782 DprA winged helix domain ILR57_000825 PF02481 DNA recombination-mediator protein A ILR57_000835 PF01327 Polypeptide deformylase ILR57_000860 PF00440 Bacterial regulatory proteins, tetR family ILR57_000895 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_000905 PF03358 NADPH-dependent FMN reductase ILR57_000925 PF08497 Radical SAM N-terminal ILR57_000925 PF11842 Domain of unknown function (DUF3362) ILR57_000925 PF04055 Radical SAM superfamily ILR57_000940 PF00817 impB/mucB/samB family ILR57_000940 PF11799 impB/mucB/samB family C-terminal domain ILR57_000940 PF11798 IMS family HHH motif ILR57_000945 PF01183 Glycosyl hydrolases family 25 ILR57_000950 PF07690 Major Facilitator Superfamily ILR57_000955 PF03641 Possible lysine decarboxylase ILR57_000960 PF03471 Transporter associated domain ILR57_000960 PF03741 Integral membrane protein TerC family ILR57_000965 PF02810 SEC-C motif ILR57_000970 PF03458 UPF0126 domain ILR57_000975 PF07690 Major Facilitator Superfamily ILR57_000980 PF03989 DNA gyrase C-terminal domain, beta-propeller ILR57_000980 PF00521 DNA gyrase/topoisomerase IV, subunit A ILR57_000985 PF00501 AMP-binding enzyme ILR57_000985 PF13193 AMP-binding enzyme C-terminal domain ILR57_001000 PF00719 Inorganic pyrophosphatase ILR57_001005 PF03573 outer membrane porin, OprD family ILR57_001015 PF00701 Dihydrodipicolinate synthetase family ILR57_001025 PF00155 Aminotransferase class I and II ILR57_001025 PF00392 Bacterial regulatory proteins, gntR family ILR57_001030 PF01078 Magnesium chelatase, subunit ChlI ILR57_001030 PF13335 Magnesium chelatase, subunit ChlI C-terminal ILR57_001040 PF00665 Integrase core domain ILR57_001070 PF00582 Universal stress protein family ILR57_001075 PF01740 STAS domain ILR57_001075 PF00916 Sulfate permease family ILR57_001085 PF13335 Magnesium chelatase, subunit ChlI C-terminal ILR57_001085 PF01078 Magnesium chelatase, subunit ChlI ILR57_001095 PF00543 Nitrogen regulatory protein P-II ILR57_001100 PF00909 Ammonium Transporter Family ILR57_001105 PF03477 ATP cone domain ILR57_001110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILR57_001110 PF01872 RibD C-terminal domain ILR57_001120 PF00677 Lumazine binding domain ILR57_001140 PF00883 Cytosol aminopeptidase family, catalytic domain ILR57_001140 PF02789 Cytosol aminopeptidase family, N-terminal domain ILR57_001150 PF03739 Lipopolysaccharide export system permease LptF/LptG ILR57_001155 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ILR57_001155 PF01676 Metalloenzyme superfamily ILR57_001160 PF00595 PDZ domain ILR57_001160 PF03572 Peptidase family S41 ILR57_001165 PF00072 Response regulator receiver domain ILR57_001165 PF00158 Sigma-54 interaction domain ILR57_001165 PF02954 Bacterial regulatory protein, Fis family ILR57_001170 PF00512 His Kinase A (phospho-acceptor) domain ILR57_001170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_001175 PF00196 Bacterial regulatory proteins, luxR family ILR57_001175 PF00072 Response regulator receiver domain ILR57_001180 PF00768 D-alanyl-D-alanine carboxypeptidase ILR57_001185 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_001190 PF01842 ACT domain ILR57_001190 PF03447 Homoserine dehydrogenase, NAD binding domain ILR57_001190 PF00742 Homoserine dehydrogenase ILR57_001195 PF13098 Thioredoxin-like domain ILR57_001195 PF10411 Disulfide bond isomerase protein N-terminus ILR57_001200 PF02899 Phage integrase, N-terminal SAM-like domain ILR57_001200 PF00589 Phage integrase family ILR57_001210 PF07670 Nucleoside recognition ILR57_001210 PF02421 Ferrous iron transport protein B ILR57_001210 PF07664 Ferrous iron transport protein B C terminus ILR57_001220 PF08245 Mur ligase middle domain ILR57_001220 PF02875 Mur ligase family, glutamate ligase domain ILR57_001225 PF01098 Cell cycle protein ILR57_001230 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR57_001235 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILR57_001240 PF00149 Calcineurin-like phosphoesterase ILR57_001245 PF00293 NUDIX domain ILR57_001250 PF01964 Radical SAM ThiC family ILR57_001250 PF13667 ThiC-associated domain ILR57_001265 PF00892 EamA-like transporter family ILR57_001270 PF02321 Outer membrane efflux protein ILR57_001275 PF01895 PhoU domain ILR57_001280 PF04362 Bacterial Fe(2+) trafficking ILR57_001285 PF14698 Argininosuccinate lyase C-terminal ILR57_001285 PF00206 Lyase ILR57_001290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_001290 PF07694 5TMR of 5TMR-LYT ILR57_001290 PF06580 Histidine kinase ILR57_001295 PF04397 LytTr DNA-binding domain ILR57_001295 PF00072 Response regulator receiver domain ILR57_001300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ILR57_001300 PF03900 Porphobilinogen deaminase, C-terminal domain ILR57_001325 PF00816 H-NS histone family ILR57_001340 PF00263 Bacterial type II and III secretion system protein ILR57_001340 PF03958 Bacterial type II/III secretion system short domain ILR57_001345 PF00498 FHA domain ILR57_001345 PF12401 Protein of unknown function (DUF2662) ILR57_001350 PF13419 Haloacid dehalogenase-like hydrolase ILR57_001355 PF00425 chorismate binding enzyme ILR57_001355 PF04715 Anthranilate synthase component I, N terminal region ILR57_001380 PF00009 Elongation factor Tu GTP binding domain ILR57_001380 PF03144 Elongation factor Tu domain 2 ILR57_001380 PF03143 Elongation factor Tu C-terminal domain ILR57_001390 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ILR57_001395 PF00467 KOW motif ILR57_001395 PF02357 Transcription termination factor nusG ILR57_001400 PF00298 Ribosomal protein L11, RNA binding domain ILR57_001400 PF03946 Ribosomal protein L11, N-terminal domain ILR57_001405 PF00687 Ribosomal protein L1p/L10e family ILR57_001410 PF00466 Ribosomal protein L10 ILR57_001415 PF16320 Ribosomal protein L7/L12 dimerisation domain ILR57_001415 PF00542 Ribosomal protein L7/L12 C-terminal domain ILR57_001420 PF04565 RNA polymerase Rpb2, domain 3 ILR57_001420 PF04560 RNA polymerase Rpb2, domain 7 ILR57_001420 PF00562 RNA polymerase Rpb2, domain 6 ILR57_001420 PF10385 RNA polymerase beta subunit external 1 domain ILR57_001420 PF04561 RNA polymerase Rpb2, domain 2 ILR57_001420 PF04563 RNA polymerase beta subunit ILR57_001425 PF04998 RNA polymerase Rpb1, domain 5 ILR57_001425 PF05000 RNA polymerase Rpb1, domain 4 ILR57_001425 PF04983 RNA polymerase Rpb1, domain 3 ILR57_001425 PF00623 RNA polymerase Rpb1, domain 2 ILR57_001425 PF04997 RNA polymerase Rpb1, domain 1 ILR57_001450 PF13726 Na+-H+ antiporter family ILR57_001450 PF03553 Na+/H+ antiporter family ILR57_001465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_001465 PF00183 Hsp90 protein ILR57_001480 PF01323 DSBA-like thioredoxin domain ILR57_001490 PF00376 MerR family regulatory protein ILR57_001490 PF09278 MerR, DNA binding ILR57_001505 PF00108 Thiolase, N-terminal domain ILR57_001505 PF02803 Thiolase, C-terminal domain ILR57_001510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR57_001510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR57_001510 PF00378 Enoyl-CoA hydratase/isomerase ILR57_001530 PF01541 GIY-YIG catalytic domain ILR57_001530 PF02151 UvrB/uvrC motif ILR57_001530 PF08459 UvrC Helix-hairpin-helix N-terminal ILR57_001540 PF01066 CDP-alcohol phosphatidyltransferase ILR57_001545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR57_001545 PF02805 Metal binding domain of Ada ILR57_001545 PF12833 Helix-turn-helix domain ILR57_001545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILR57_001570 PF13533 Biotin-lipoyl like ILR57_001575 PF03652 Holliday junction resolvase ILR57_001580 PF02622 Uncharacterized ACR, COG1678 ILR57_001585 PF02463 RecF/RecN/SMC N terminal domain ILR57_001595 PF06865 Pyrimidine/purine nucleoside phosphorylase ILR57_001600 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILR57_001600 PF00588 SpoU rRNA Methylase family ILR57_001610 PF01121 Dephospho-CoA kinase ILR57_001615 PF06750 Bacterial Peptidase A24 N-terminal domain ILR57_001615 PF01478 Type IV leader peptidase family ILR57_001620 PF00482 Type II secretion system (T2SS), protein F ILR57_001625 PF00437 Type II/IV secretion system protein ILR57_001625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILR57_001630 PF00121 Triosephosphate isomerase ILR57_001635 PF03840 Preprotein translocase SecG subunit ILR57_001655 PF02576 RimP N-terminal domain ILR57_001655 PF17384 RimP C-terminal SH3 domain ILR57_001660 PF13184 NusA-like KH domain ILR57_001660 PF08529 NusA N-terminal domain ILR57_001660 PF00575 S1 RNA binding domain ILR57_001665 PF04760 Translation initiation factor IF-2, N-terminal region ILR57_001665 PF08364 Bacterial translation initiation factor IF-2 associated region ILR57_001665 PF11987 Translation-initiation factor 2 ILR57_001665 PF00009 Elongation factor Tu GTP binding domain ILR57_001670 PF02033 Ribosome-binding factor A ILR57_001675 PF03334 Na+/H+ antiporter subunit ILR57_001680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ILR57_001685 PF01899 Na+/H+ ion antiporter subunit ILR57_001690 PF00361 Proton-conducting membrane transporter ILR57_001695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILR57_001700 PF13244 Domain of unknown function (DUF4040) ILR57_001700 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ILR57_001700 PF00361 Proton-conducting membrane transporter ILR57_001700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILR57_001715 PF01502 Phosphoribosyl-AMP cyclohydrolase ILR57_001720 PF01494 FAD binding domain ILR57_001725 PF03109 ABC1 family ILR57_001735 PF01209 ubiE/COQ5 methyltransferase family ILR57_001745 PF03976 Polyphosphate kinase 2 (PPK2) ILR57_001755 PF17946 RecC C-terminal domain ILR57_001760 PF00580 UvrD/REP helicase N-terminal domain ILR57_001760 PF13361 UvrD-like helicase C-terminal domain ILR57_001760 PF12705 PD-(D/E)XK nuclease superfamily ILR57_001765 PF13538 UvrD-like helicase C-terminal domain ILR57_001770 PF00144 Beta-lactamase ILR57_001775 PF00312 Ribosomal protein S15 ILR57_001780 PF00013 KH domain ILR57_001780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ILR57_001780 PF01138 3' exoribonuclease family, domain 1 ILR57_001780 PF03725 3' exoribonuclease family, domain 2 ILR57_001780 PF00575 S1 RNA binding domain ILR57_001785 PF01544 CorA-like Mg2+ transporter protein ILR57_001795 PF00226 DnaJ domain ILR57_001795 PF01556 DnaJ C terminal domain ILR57_001805 PF01430 Hsp33 protein ILR57_001810 PF00999 Sodium/hydrogen exchanger family ILR57_001810 PF02254 TrkA-N domain ILR57_001815 PF00270 DEAD/DEAH box helicase ILR57_001815 PF00271 Helicase conserved C-terminal domain ILR57_001815 PF17764 3′ DNA-binding domain (3′BD) ILR57_001815 PF18074 Primosomal protein N C-terminal domain ILR57_001815 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ILR57_001820 PF00482 Type II secretion system (T2SS), protein F ILR57_001825 PF07963 Prokaryotic N-terminal methylation motif ILR57_001825 PF08334 Type II secretion system (T2SS), protein G ILR57_001835 PF01588 Putative tRNA binding domain ILR57_001840 PF00795 Carbon-nitrogen hydrolase ILR57_001845 PF00571 CBS domain ILR57_001845 PF03471 Transporter associated domain ILR57_001850 PF01206 Sulfurtransferase TusA ILR57_001870 PF01177 Asp/Glu/Hydantoin racemase ILR57_001880 PF00762 Ferrochelatase ILR57_001885 PF00753 Metallo-beta-lactamase superfamily ILR57_001890 PF03884 DNA gyrase inhibitor YacG ILR57_001900 PF13247 4Fe-4S dicluster domain ILR57_001900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILR57_001900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_001910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ILR57_001920 PF01197 Ribosomal protein L31 ILR57_001925 PF03109 ABC1 family ILR57_001930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_001930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR57_001935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR57_001935 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_001935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_001940 PF01554 MatE ILR57_001950 PF06969 HemN C-terminal domain ILR57_001950 PF04055 Radical SAM superfamily ILR57_001960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_001960 PF03466 LysR substrate binding domain ILR57_001975 PF13193 AMP-binding enzyme C-terminal domain ILR57_001975 PF00501 AMP-binding enzyme ILR57_001980 PF12111 Polyribonucleotide phosphorylase C terminal ILR57_001980 PF10150 Ribonuclease E/G family ILR57_001980 PF00575 S1 RNA binding domain ILR57_001985 PF00849 RNA pseudouridylate synthase ILR57_001985 PF01479 S4 domain ILR57_001990 PF13419 Haloacid dehalogenase-like hydrolase ILR57_001995 PF13280 WYL domain ILR57_001995 PF08279 HTH domain ILR57_002000 PF02798 Glutathione S-transferase, N-terminal domain ILR57_002010 PF03466 LysR substrate binding domain ILR57_002010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_002015 PF12706 Beta-lactamase superfamily domain ILR57_002020 PF00141 Peroxidase ILR57_002025 PF02896 PEP-utilising enzyme, TIM barrel domain ILR57_002025 PF00391 PEP-utilising enzyme, mobile domain ILR57_002025 PF01590 GAF domain ILR57_002025 PF05524 PEP-utilising enzyme, N-terminal ILR57_002030 PF00293 NUDIX domain ILR57_002040 PF03466 LysR substrate binding domain ILR57_002040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_002050 PF00330 Aconitase family (aconitate hydratase) ILR57_002055 PF00694 Aconitase C-terminal domain ILR57_002065 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR57_002080 PF01176 Translation initiation factor 1A / IF-1 ILR57_002090 PF01416 tRNA pseudouridine synthase ILR57_002110 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILR57_002110 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILR57_002120 PF00375 Sodium:dicarboxylate symporter family ILR57_002130 PF03279 Bacterial lipid A biosynthesis acyltransferase ILR57_002135 PF01810 LysE type translocator ILR57_002140 PF00005 ABC transporter ILR57_002140 PF16326 ABC transporter C-terminal domain ILR57_002140 PF12848 ABC transporter ILR57_002145 PF04102 SlyX ILR57_002150 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_002150 PF00107 Zinc-binding dehydrogenase ILR57_002155 PF01638 HxlR-like helix-turn-helix ILR57_002165 PF01396 Topoisomerase DNA binding C4 zinc finger ILR57_002165 PF01751 Toprim domain ILR57_002165 PF01131 DNA topoisomerase ILR57_002165 PF08272 Topoisomerase I zinc-ribbon-like ILR57_002180 PF00580 UvrD/REP helicase N-terminal domain ILR57_002180 PF13361 UvrD-like helicase C-terminal domain ILR57_002185 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ILR57_002205 PF02254 TrkA-N domain ILR57_002205 PF00999 Sodium/hydrogen exchanger family ILR57_002210 PF00471 Ribosomal protein L33 ILR57_002215 PF00830 Ribosomal L28 family ILR57_002220 PF00171 Aldehyde dehydrogenase family ILR57_002230 PF01842 ACT domain ILR57_002230 PF00551 Formyl transferase ILR57_002240 PF01618 MotA/TolQ/ExbB proton channel family ILR57_002250 PF01625 Peptide methionine sulfoxide reductase ILR57_002260 PF00186 Dihydrofolate reductase ILR57_002265 PF00303 Thymidylate synthase ILR57_002280 PF01790 Prolipoprotein diacylglyceryl transferase ILR57_002300 PF00902 Sec-independent protein translocase protein (TatC) ILR57_002305 PF02416 mttA/Hcf106 family ILR57_002310 PF02416 mttA/Hcf106 family ILR57_002320 PF01725 Ham1 family ILR57_002330 PF00561 alpha/beta hydrolase fold ILR57_002330 PF07021 Methionine biosynthesis protein MetW ILR57_002335 PF00561 alpha/beta hydrolase fold ILR57_002340 PF08502 LeuA allosteric (dimerisation) domain ILR57_002340 PF00682 HMGL-like ILR57_002345 PF18331 PKHD-type hydroxylase C-terminal domain ILR57_002345 PF13640 2OG-Fe(II) oxygenase superfamily ILR57_002350 PF07715 TonB-dependent Receptor Plug Domain ILR57_002350 PF00593 TonB dependent receptor ILR57_002355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_002355 PF05698 Bacterial trigger factor protein (TF) C-terminus ILR57_002355 PF05697 Bacterial trigger factor protein (TF) ILR57_002360 PF00574 Clp protease ILR57_002365 PF07724 AAA domain (Cdc48 subfamily) ILR57_002365 PF10431 C-terminal, D2-small domain, of ClpB protein ILR57_002365 PF06689 ClpX C4-type zinc finger ILR57_002380 PF05681 Fumarate hydratase (Fumerase) ILR57_002380 PF05683 Fumarase C-terminus ILR57_002385 PF01515 Phosphate acetyl/butaryl transferase ILR57_002385 PF07085 DRTGG domain ILR57_002390 PF00871 Acetokinase family ILR57_002395 PF00920 Dehydratase family ILR57_002400 PF01081 KDPG and KHG aldolase ILR57_002405 PF02447 GntP family permease ILR57_002410 PF01202 Shikimate kinase ILR57_002415 PF00171 Aldehyde dehydrogenase family ILR57_002420 PF00171 Aldehyde dehydrogenase family ILR57_002425 PF00561 alpha/beta hydrolase fold ILR57_002435 PF00933 Glycosyl hydrolase family 3 N terminal domain ILR57_002440 PF11818 C-terminal domain of tail specific protease (DUF3340) ILR57_002440 PF03572 Peptidase family S41 ILR57_002440 PF17804 Tail specific protease N-terminal domain ILR57_002440 PF00595 PDZ domain ILR57_002445 PF13439 Glycosyltransferase Family 4 ILR57_002445 PF00534 Glycosyl transferases group 1 ILR57_002450 PF01569 PAP2 superfamily ILR57_002455 PF04384 Iron-sulphur cluster assembly ILR57_002460 PF00334 Nucleoside diphosphate kinase ILR57_002465 PF04055 Radical SAM superfamily ILR57_002475 PF13464 Domain of unknown function (DUF4115) ILR57_002480 PF04551 GcpE protein ILR57_002485 PF13393 Histidyl-tRNA synthetase ILR57_002485 PF03129 Anticodon binding domain ILR57_002495 PF13360 PQQ-like domain ILR57_002500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ILR57_002500 PF01926 50S ribosome-binding GTPase ILR57_002510 PF02556 Preprotein translocase subunit SecB ILR57_002515 PF00462 Glutaredoxin ILR57_002525 PF03193 RsgA GTPase ILR57_002530 PF00929 Exonuclease ILR57_002545 PF02321 Outer membrane efflux protein ILR57_002550 PF02687 FtsX-like permease family ILR57_002550 PF12704 MacB-like periplasmic core domain ILR57_002550 PF00005 ABC transporter ILR57_002555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_002570 PF13603 Leucyl-tRNA synthetase, Domain 2 ILR57_002570 PF08264 Anticodon-binding domain of tRNA ILR57_002570 PF00133 tRNA synthetases class I (I, L, M and V) ILR57_002570 PF09334 tRNA synthetases class I (M) ILR57_002580 PF00205 Thiamine pyrophosphate enzyme, central domain ILR57_002580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR57_002580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR57_002585 PF10369 Small subunit of acetolactate synthase ILR57_002590 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ILR57_002590 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ILR57_002615 PF16658 Class II release factor RF3, C-terminal domain ILR57_002615 PF00009 Elongation factor Tu GTP binding domain ILR57_002615 PF03144 Elongation factor Tu domain 2 ILR57_002630 PF01026 TatD related DNase ILR57_002635 PF00330 Aconitase family (aconitate hydratase) ILR57_002635 PF00694 Aconitase C-terminal domain ILR57_002640 PF00899 ThiF family ILR57_002650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_002650 PF03466 LysR substrate binding domain ILR57_002660 PF01207 Dihydrouridine synthase (Dus) ILR57_002665 PF00589 Phage integrase family ILR57_002730 PF02322 Cytochrome bd terminal oxidase subunit II ILR57_002735 PF01654 Cytochrome bd terminal oxidase subunit I ILR57_002750 PF07715 TonB-dependent Receptor Plug Domain ILR57_002750 PF00593 TonB dependent receptor ILR57_002755 PF07715 TonB-dependent Receptor Plug Domain ILR57_002755 PF00593 TonB dependent receptor ILR57_002790 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ILR57_002790 PF04717 Type VI secretion system, phage-baseplate injector ILR57_002790 PF13296 Putative type VI secretion system Rhs element Vgr ILR57_002805 PF02601 Exonuclease VII, large subunit ILR57_002805 PF13742 OB-fold nucleic acid binding domain ILR57_002820 PF06480 FtsH Extracellular ILR57_002820 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_002820 PF01434 Peptidase family M41 ILR57_002820 PF17862 AAA+ lid domain ILR57_002830 PF07690 Major Facilitator Superfamily ILR57_002840 PF00892 EamA-like transporter family ILR57_002845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ILR57_002845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ILR57_002850 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ILR57_002855 PF02233 NAD(P) transhydrogenase beta subunit ILR57_002860 PF00106 short chain dehydrogenase ILR57_002875 PF01261 Xylose isomerase-like TIM barrel ILR57_002880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR57_002880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR57_002885 PF00378 Enoyl-CoA hydratase/isomerase ILR57_002890 PF01627 Hpt domain ILR57_002890 PF00672 HAMP domain ILR57_002890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_002890 PF00512 His Kinase A (phospho-acceptor) domain ILR57_002890 PF00072 Response regulator receiver domain ILR57_002890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ILR57_002895 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_002905 PF05958 tRNA (Uracil-5-)-methyltransferase ILR57_002910 PF13291 ACT domain ILR57_002910 PF04607 Region found in RelA / SpoT proteins ILR57_002910 PF02824 TGS domain ILR57_002920 PF03819 MazG nucleotide pyrophosphohydrolase domain ILR57_002930 PF01743 Poly A polymerase head domain ILR57_002930 PF12627 Probable RNA and SrmB- binding site of polymerase A ILR57_002930 PF12626 Polymerase A arginine-rich C-terminus ILR57_002935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ILR57_002940 PF02548 Ketopantoate hydroxymethyltransferase ILR57_002945 PF02569 Pantoate-beta-alanine ligase ILR57_002950 PF03668 P-loop ATPase protein family ILR57_002955 PF00381 PTS HPr component phosphorylation site ILR57_002960 PF04751 Protein of unknown function (DUF615) ILR57_002965 PF00501 AMP-binding enzyme ILR57_002965 PF13193 AMP-binding enzyme C-terminal domain ILR57_002970 PF02824 TGS domain ILR57_002970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR57_002970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILR57_002970 PF03129 Anticodon binding domain ILR57_002975 PF00707 Translation initiation factor IF-3, C-terminal domain ILR57_002975 PF05198 Translation initiation factor IF-3, N-terminal domain ILR57_002980 PF00043 Glutathione S-transferase, C-terminal domain ILR57_002980 PF02798 Glutathione S-transferase, N-terminal domain ILR57_002985 PF09335 SNARE associated Golgi protein ILR57_002990 PF07690 Major Facilitator Superfamily ILR57_002995 PF01632 Ribosomal protein L35 ILR57_003000 PF00453 Ribosomal protein L20 ILR57_003020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ILR57_003020 PF01409 tRNA synthetases class II core domain (F) ILR57_003025 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ILR57_003025 PF01588 Putative tRNA binding domain ILR57_003025 PF03147 Ferredoxin-fold anticodon binding domain ILR57_003025 PF03483 B3/4 domain ILR57_003025 PF03484 tRNA synthetase B5 domain ILR57_003030 PF00216 Bacterial DNA-binding protein ILR57_003045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILR57_003045 PF07497 Rho termination factor, RNA-binding domain ILR57_003045 PF07498 Rho termination factor, N-terminal domain ILR57_003050 PF00085 Thioredoxin ILR57_003055 PF02541 Ppx/GppA phosphatase family ILR57_003060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ILR57_003065 PF01171 PP-loop family ILR57_003065 PF09179 TilS substrate binding domain ILR57_003065 PF11734 TilS substrate C-terminal domain ILR57_003070 PF03807 NADP oxidoreductase coenzyme F420-dependent ILR57_003070 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILR57_003075 PF02325 YGGT family ILR57_003080 PF00476 DNA polymerase family A ILR57_003080 PF01367 5'-3' exonuclease, C-terminal SAM fold ILR57_003080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILR57_003080 PF01612 3'-5' exonuclease ILR57_003100 PF00437 Type II/IV secretion system protein ILR57_003105 PF02566 OsmC-like protein ILR57_003110 PF01047 MarR family ILR57_003120 PF00795 Carbon-nitrogen hydrolase ILR57_003165 PF04963 Sigma-54 factor, core binding domain ILR57_003165 PF04552 Sigma-54, DNA binding domain ILR57_003165 PF00309 Sigma-54 factor, Activator interacting domain (AID) ILR57_003170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILR57_003175 PF01722 BolA-like protein ILR57_003180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILR57_003185 PF01634 ATP phosphoribosyltransferase ILR57_003190 PF00815 Histidinol dehydrogenase ILR57_003195 PF00155 Aminotransferase class I and II ILR57_003200 PF04715 Anthranilate synthase component I, N terminal region ILR57_003200 PF00425 chorismate binding enzyme ILR57_003240 PF00293 NUDIX domain ILR57_003245 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_003250 PF00814 Glycoprotease family ILR57_003255 PF04445 Putative SAM-dependent methyltransferase ILR57_003265 PF00756 Putative esterase ILR57_003275 PF00834 Ribulose-phosphate 3 epimerase family ILR57_003290 PF00394 Multicopper oxidase ILR57_003290 PF07731 Multicopper oxidase ILR57_003290 PF07732 Multicopper oxidase ILR57_003305 PF00893 Small Multidrug Resistance protein ILR57_003310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR57_003310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILR57_003315 PF01960 ArgJ family ILR57_003320 PF02445 Quinolinate synthetase A protein ILR57_003345 PF00962 Adenosine/AMP deaminase ILR57_003350 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_003350 PF00107 Zinc-binding dehydrogenase ILR57_003355 PF03466 LysR substrate binding domain ILR57_003355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_003360 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_003360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_003360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_003365 PF07690 Major Facilitator Superfamily ILR57_003370 PF02515 CoA-transferase family III ILR57_003380 PF14537 Cytochrome c3 ILR57_003380 PF00890 FAD binding domain ILR57_003385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_003385 PF03466 LysR substrate binding domain ILR57_003395 PF07690 Major Facilitator Superfamily ILR57_003400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_003400 PF03466 LysR substrate binding domain ILR57_003405 PF01810 LysE type translocator ILR57_003410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_003410 PF03466 LysR substrate binding domain ILR57_003420 PF08267 Cobalamin-independent synthase, N-terminal domain ILR57_003420 PF01717 Cobalamin-independent synthase, Catalytic domain ILR57_003425 PF01613 Flavin reductase like domain ILR57_003470 PF02567 Phenazine biosynthesis-like protein ILR57_003485 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ILR57_003500 PF00083 Sugar (and other) transporter ILR57_003510 PF00293 NUDIX domain ILR57_003510 PF09297 NADH pyrophosphatase zinc ribbon domain ILR57_003515 PF00171 Aldehyde dehydrogenase family ILR57_003520 PF00296 Luciferase-like monooxygenase ILR57_003525 PF01613 Flavin reductase like domain ILR57_003530 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR57_003535 PF00892 EamA-like transporter family ILR57_003540 PF00268 Ribonucleotide reductase, small chain ILR57_003550 PF02867 Ribonucleotide reductase, barrel domain ILR57_003550 PF00317 Ribonucleotide reductase, all-alpha domain ILR57_003550 PF03477 ATP cone domain ILR57_003560 PF00072 Response regulator receiver domain ILR57_003560 PF00486 Transcriptional regulatory protein, C terminal ILR57_003565 PF00672 HAMP domain ILR57_003565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_003565 PF00512 His Kinase A (phospho-acceptor) domain ILR57_003575 PF17151 Periplasmic sensor domain ILR57_003575 PF00990 Diguanylate cyclase, GGDEF domain ILR57_003580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ILR57_003585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILR57_003590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILR57_003590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILR57_003600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILR57_003600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ILR57_003600 PF10531 SLBB domain ILR57_003605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ILR57_003605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR57_003605 PF00384 Molybdopterin oxidoreductase ILR57_003610 PF00146 NADH dehydrogenase ILR57_003615 PF12838 4Fe-4S dicluster domain ILR57_003620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ILR57_003625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILR57_003630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILR57_003630 PF00361 Proton-conducting membrane transporter ILR57_003635 PF00361 Proton-conducting membrane transporter ILR57_003640 PF00361 Proton-conducting membrane transporter ILR57_003650 PF00313 'Cold-shock' DNA-binding domain ILR57_003660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_003660 PF03466 LysR substrate binding domain ILR57_003665 PF00175 Oxidoreductase NAD-binding domain ILR57_003665 PF00970 Oxidoreductase FAD-binding domain ILR57_003680 PF05552 Conserved TM helix ILR57_003695 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_003700 PF13533 Biotin-lipoyl like ILR57_003725 PF09334 tRNA synthetases class I (M) ILR57_003725 PF01588 Putative tRNA binding domain ILR57_003735 PF10609 NUBPL iron-transfer P-loop NTPase ILR57_003740 PF01048 Phosphorylase superfamily ILR57_003755 PF00692 dUTPase ILR57_003785 PF01207 Dihydrouridine synthase (Dus) ILR57_003795 PF00448 SRP54-type protein, GTPase domain ILR57_003795 PF02881 SRP54-type protein, helical bundle domain ILR57_003795 PF02978 Signal peptide binding domain ILR57_003800 PF03309 Type III pantothenate kinase ILR57_003810 PF01925 Sulfite exporter TauE/SafE ILR57_003820 PF06470 SMC proteins Flexible Hinge Domain ILR57_003820 PF02463 RecF/RecN/SMC N terminal domain ILR57_003830 PF00533 BRCA1 C Terminus (BRCT) domain ILR57_003830 PF01653 NAD-dependent DNA ligase adenylation domain ILR57_003830 PF03120 NAD-dependent DNA ligase OB-fold domain ILR57_003830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ILR57_003830 PF12826 Helix-hairpin-helix motif ILR57_003835 PF00210 Ferritin-like domain ILR57_003840 PF07690 Major Facilitator Superfamily ILR57_003845 PF00982 Glycosyltransferase family 20 ILR57_003850 PF02358 Trehalose-phosphatase ILR57_003855 PF08241 Methyltransferase domain ILR57_003855 PF12697 Alpha/beta hydrolase family ILR57_003860 PF04055 Radical SAM superfamily ILR57_003860 PF00202 Aminotransferase class-III ILR57_003860 PF06968 Biotin and Thiamin Synthesis associated domain ILR57_003865 PF00155 Aminotransferase class I and II ILR57_003880 PF00849 RNA pseudouridylate synthase ILR57_003880 PF01479 S4 domain ILR57_003885 PF04079 Segregation and condensation complex subunit ScpB ILR57_003890 PF02616 Segregation and condensation protein ScpA ILR57_003895 PF01300 Telomere recombination ILR57_003900 PF04315 Elongation factor P hydroxylase ILR57_003905 PF02620 Large ribosomal RNA subunit accumulation protein YceD ILR57_003910 PF01783 Ribosomal L32p protein family ILR57_003915 PF00698 Acyl transferase domain ILR57_003925 PF00550 Phosphopantetheine attachment site ILR57_003930 PF04972 BON domain ILR57_003930 PF01476 LysM domain ILR57_003935 PF08543 Phosphomethylpyrimidine kinase ILR57_003935 PF03070 TENA/THI-4/PQQC family ILR57_003935 PF02581 Thiamine monophosphate synthase ILR57_003945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILR57_003960 PF02261 Aspartate decarboxylase ILR57_003965 PF01195 Peptidyl-tRNA hydrolase ILR57_003970 PF01386 Ribosomal L25p family ILR57_003975 PF14572 Phosphoribosyl synthetase-associated domain ILR57_003975 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILR57_004000 PF08544 GHMP kinases C terminal ILR57_004000 PF00288 GHMP kinases N terminal domain ILR57_004005 PF03550 Outer membrane lipoprotein LolB ILR57_004015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ILR57_004015 PF01488 Shikimate / quinate 5-dehydrogenase ILR57_004015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ILR57_004020 PF01807 CHC2 zinc finger ILR57_004020 PF08275 DNA primase catalytic core, N-terminal domain ILR57_004020 PF08278 DNA primase DnaG DnaB-binding ILR57_004020 PF10410 DnaB-helicase binding domain of primase ILR57_004025 PF13525 Outer membrane lipoprotein ILR57_004030 PF01479 S4 domain ILR57_004030 PF00849 RNA pseudouridylate synthase ILR57_004035 PF02578 Multi-copper polyphenol oxidoreductase laccase ILR57_004040 PF03358 NADPH-dependent FMN reductase ILR57_004045 PF01668 SmpB protein ILR57_004050 PF01467 Cytidylyltransferase-like ILR57_004055 PF00037 4Fe-4S binding domain ILR57_004075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_004075 PF03466 LysR substrate binding domain ILR57_004080 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR57_004085 PF02028 BCCT, betaine/carnitine/choline family transporter ILR57_004090 PF07859 alpha/beta hydrolase fold ILR57_004095 PF00355 Rieske [2Fe-2S] domain ILR57_004095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR57_004100 PF00171 Aldehyde dehydrogenase family ILR57_004105 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_004105 PF00175 Oxidoreductase NAD-binding domain ILR57_004105 PF00970 Oxidoreductase FAD-binding domain ILR57_004120 PF00795 Carbon-nitrogen hydrolase ILR57_004120 PF02540 NAD synthase ILR57_004130 PF02678 Pirin ILR57_004130 PF05726 Pirin C-terminal cupin domain ILR57_004135 PF03653 Uncharacterised protein family (UPF0093) ILR57_004140 PF00109 Beta-ketoacyl synthase, N-terminal domain ILR57_004140 PF02801 Beta-ketoacyl synthase, C-terminal domain ILR57_004150 PF00164 Ribosomal protein S12/S23 ILR57_004155 PF00177 Ribosomal protein S7p/S5e ILR57_004160 PF03144 Elongation factor Tu domain 2 ILR57_004160 PF00679 Elongation factor G C-terminus ILR57_004160 PF14492 Elongation Factor G, domain II ILR57_004160 PF03764 Elongation factor G, domain IV ILR57_004160 PF00009 Elongation factor Tu GTP binding domain ILR57_004165 PF03143 Elongation factor Tu C-terminal domain ILR57_004165 PF00009 Elongation factor Tu GTP binding domain ILR57_004165 PF03144 Elongation factor Tu domain 2 ILR57_004180 PF00583 Acetyltransferase (GNAT) family ILR57_004185 PF04376 Arginine-tRNA-protein transferase, N terminus ILR57_004185 PF04377 Arginine-tRNA-protein transferase, C terminus ILR57_004190 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ILR57_004195 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_004200 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ILR57_004200 PF17854 FtsK alpha domain ILR57_004200 PF09397 Ftsk gamma domain ILR57_004200 PF01580 FtsK/SpoIIIE family ILR57_004205 PF01810 LysE type translocator ILR57_004215 PF03776 Septum formation topological specificity factor MinE ILR57_004220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ILR57_004225 PF03775 Septum formation inhibitor MinC, C-terminal domain ILR57_004235 PF01553 Acyltransferase ILR57_004240 PF13488 Glycine zipper ILR57_004240 PF00691 OmpA family ILR57_004245 PF00580 UvrD/REP helicase N-terminal domain ILR57_004245 PF13361 UvrD-like helicase C-terminal domain ILR57_004250 PF00692 dUTPase ILR57_004255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR57_004255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR57_004255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR57_004255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR57_004260 PF00696 Amino acid kinase family ILR57_004270 PF13230 Glutamine amidotransferases class-II ILR57_004275 PF01814 Hemerythrin HHE cation binding domain ILR57_004285 PF03658 RnfH family Ubiquitin ILR57_004290 PF04355 SmpA / OmlA family ILR57_004295 PF01475 Ferric uptake regulator family ILR57_004300 PF00437 Type II/IV secretion system protein ILR57_004305 PF00437 Type II/IV secretion system protein ILR57_004310 PF01168 Alanine racemase, N-terminal domain ILR57_004320 PF00149 Calcineurin-like phosphoesterase ILR57_004320 PF12320 Type 5 capsule protein repressor C-terminal domain ILR57_004340 PF08338 Domain of unknown function (DUF1731) ILR57_004340 PF01370 NAD dependent epimerase/dehydratase family ILR57_004345 PF01266 FAD dependent oxidoreductase ILR57_004350 PF00490 Delta-aminolevulinic acid dehydratase ILR57_004355 PF03061 Thioesterase superfamily ILR57_004360 PF13533 Biotin-lipoyl like ILR57_004365 PF07690 Major Facilitator Superfamily ILR57_004430 PF00929 Exonuclease ILR57_004465 PF00717 Peptidase S24-like ILR57_004465 PF01381 Helix-turn-helix ILR57_004510 PF00145 C-5 cytosine-specific DNA methylase ILR57_004520 PF01695 IstB-like ATP binding protein ILR57_004595 PF07007 Lysozyme inhibitor LprI ILR57_004745 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ILR57_004785 PF02767 DNA polymerase III beta subunit, central domain ILR57_004785 PF02768 DNA polymerase III beta subunit, C-terminal domain ILR57_004785 PF00712 DNA polymerase III beta subunit, N-terminal domain ILR57_004855 PF13438 Domain of unknown function (DUF4113) ILR57_004855 PF00817 impB/mucB/samB family ILR57_004855 PF11799 impB/mucB/samB family C-terminal domain ILR57_004855 PF11798 IMS family HHH motif ILR57_004860 PF00717 Peptidase S24-like ILR57_004905 PF12161 HsdM N-terminal domain ILR57_004905 PF02384 N-6 DNA Methylase ILR57_004915 PF08463 EcoEI R protein C-terminal ILR57_004915 PF00271 Helicase conserved C-terminal domain ILR57_004915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ILR57_004915 PF04851 Type III restriction enzyme, res subunit ILR57_004925 PF00083 Sugar (and other) transporter ILR57_004930 PF00701 Dihydrodipicolinate synthetase family ILR57_004940 PF04542 Sigma-70 region 2 ILR57_004940 PF08281 Sigma-70, region 4 ILR57_004970 PF01126 Heme oxygenase ILR57_004995 PF13520 Amino acid permease ILR57_005000 PF02574 Homocysteine S-methyltransferase ILR57_005010 PF06039 Malate:quinone oxidoreductase (Mqo) ILR57_005015 PF00732 GMC oxidoreductase ILR57_005015 PF05199 GMC oxidoreductase ILR57_005020 PF00171 Aldehyde dehydrogenase family ILR57_005025 PF13977 BetI-type transcriptional repressor, C-terminal ILR57_005025 PF00440 Bacterial regulatory proteins, tetR family ILR57_005030 PF02028 BCCT, betaine/carnitine/choline family transporter ILR57_005035 PF02028 BCCT, betaine/carnitine/choline family transporter ILR57_005045 PF03061 Thioesterase superfamily ILR57_005055 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR57_005055 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILR57_005060 PF00375 Sodium:dicarboxylate symporter family ILR57_005065 PF07152 YaeQ protein ILR57_005070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_005075 PF14883 Hypothetical glycosyl hydrolase family 13 ILR57_005075 PF01522 Polysaccharide deacetylase ILR57_005080 PF00535 Glycosyl transferase family 2 ILR57_005090 PF00378 Enoyl-CoA hydratase/isomerase ILR57_005105 PF09339 IclR helix-turn-helix domain ILR57_005105 PF01614 Bacterial transcriptional regulator ILR57_005110 PF00355 Rieske [2Fe-2S] domain ILR57_005120 PF00355 Rieske [2Fe-2S] domain ILR57_005130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR57_005135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_005135 PF14759 Reductase C-terminal ILR57_005140 PF07690 Major Facilitator Superfamily ILR57_005150 PF12697 Alpha/beta hydrolase family ILR57_005160 PF01958 Domain of unknown function DUF108 ILR57_005160 PF03447 Homoserine dehydrogenase, NAD binding domain ILR57_005165 PF00171 Aldehyde dehydrogenase family ILR57_005170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR57_005170 PF00205 Thiamine pyrophosphate enzyme, central domain ILR57_005170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR57_005185 PF01327 Polypeptide deformylase ILR57_005190 PF04960 Glutaminase ILR57_005195 PF02311 AraC-like ligand binding domain ILR57_005195 PF12833 Helix-turn-helix domain ILR57_005200 PF07690 Major Facilitator Superfamily ILR57_005205 PF01263 Aldose 1-epimerase ILR57_005215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_005215 PF03466 LysR substrate binding domain ILR57_005225 PF07690 Major Facilitator Superfamily ILR57_005230 PF00456 Transketolase, thiamine diphosphate binding domain ILR57_005235 PF02779 Transketolase, pyrimidine binding domain ILR57_005235 PF02780 Transketolase, C-terminal domain ILR57_005240 PF02574 Homocysteine S-methyltransferase ILR57_005240 PF02310 B12 binding domain ILR57_005240 PF02607 B12 binding domain ILR57_005240 PF02965 Vitamin B12 dependent methionine synthase, activation domain ILR57_005240 PF00809 Pterin binding enzyme ILR57_005245 PF01384 Phosphate transporter family ILR57_005250 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_005265 PF03781 Sulfatase-modifying factor enzyme 1 ILR57_005270 PF00884 Sulfatase ILR57_005280 PF01521 Iron-sulphur cluster biosynthesis ILR57_005280 PF01106 NifU-like domain ILR57_005285 PF07715 TonB-dependent Receptor Plug Domain ILR57_005285 PF00593 TonB dependent receptor ILR57_005295 PF00561 alpha/beta hydrolase fold ILR57_005300 PF00484 Carbonic anhydrase ILR57_005305 PF13472 GDSL-like Lipase/Acylhydrolase family ILR57_005310 PF00005 ABC transporter ILR57_005320 PF01694 Rhomboid family ILR57_005325 PF00912 Transglycosylase ILR57_005330 PF02503 Polyphosphate kinase middle domain ILR57_005330 PF13090 Polyphosphate kinase C-terminal domain 2 ILR57_005330 PF17941 Polyphosphate kinase C-terminal domain 1 ILR57_005330 PF13089 Polyphosphate kinase N-terminal domain ILR57_005345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_005345 PF03466 LysR substrate binding domain ILR57_005350 PF00561 alpha/beta hydrolase fold ILR57_005355 PF18113 Rubredoxin binding C-terminal domain ILR57_005355 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_005360 PF00301 Rubredoxin ILR57_005375 PF00152 tRNA synthetases class II (D, K and N) ILR57_005375 PF01336 OB-fold nucleic acid binding domain ILR57_005380 PF14052 Capsule assembly protein Wzi ILR57_005390 PF01507 Phosphoadenosine phosphosulfate reductase family ILR57_005395 PF00009 Elongation factor Tu GTP binding domain ILR57_005410 PF03600 Citrate transporter ILR57_005415 PF01595 Cyclin M transmembrane N-terminal domain ILR57_005415 PF00571 CBS domain ILR57_005415 PF03471 Transporter associated domain ILR57_005420 PF03466 LysR substrate binding domain ILR57_005420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_005425 PF00463 Isocitrate lyase family ILR57_005440 PF01774 UreD urease accessory protein ILR57_005445 PF00547 Urease, gamma subunit ILR57_005450 PF00699 Urease beta subunit ILR57_005455 PF01979 Amidohydrolase family ILR57_005455 PF00449 Urease alpha-subunit, N-terminal domain ILR57_005460 PF02814 UreE urease accessory protein, N-terminal domain ILR57_005460 PF05194 UreE urease accessory protein, C-terminal domain ILR57_005465 PF01730 UreF ILR57_005470 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR57_005485 PF03717 Penicillin-binding Protein dimerisation domain ILR57_005485 PF00905 Penicillin binding protein transpeptidase domain ILR57_005500 PF05191 Adenylate kinase, active site lid ILR57_005510 PF00633 Helix-hairpin-helix motif ILR57_005510 PF10576 Iron-sulfur binding domain of endonuclease III ILR57_005510 PF00730 HhH-GPD superfamily base excision DNA repair protein ILR57_005515 PF04060 Putative Fe-S cluster ILR57_005520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILR57_005520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILR57_005530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILR57_005535 PF02590 Predicted SPOUT methyltransferase ILR57_005540 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_005540 PF05362 Lon protease (S16) C-terminal proteolytic domain ILR57_005540 PF02190 ATP-dependent protease La (LON) substrate-binding domain ILR57_005550 PF01812 5-formyltetrahydrofolate cyclo-ligase family ILR57_005900 PF00884 Sulfatase ILR57_005900 PF08019 Phosphoethanolamine transferase EptA/EptB ILR57_005935 PF00557 Metallopeptidase family M24 ILR57_005935 PF05195 Aminopeptidase P, N-terminal domain ILR57_005940 PF01494 FAD binding domain ILR57_005945 PF01494 FAD binding domain ILR57_005955 PF13411 MerR HTH family regulatory protein ILR57_005965 PF01810 LysE type translocator ILR57_005970 PF03466 LysR substrate binding domain ILR57_005970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_005980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILR57_005985 PF02021 Uncharacterised protein family UPF0102 ILR57_005990 PF04972 BON domain ILR57_006000 PF00293 NUDIX domain ILR57_006000 PF09297 NADH pyrophosphatase zinc ribbon domain ILR57_006010 PF00929 Exonuclease ILR57_006015 PF01464 Transglycosylase SLT domain ILR57_006015 PF01476 LysM domain ILR57_006015 PF01464 Transglycosylase SLT domain ILR57_006015 PF01476 LysM domain ILR57_006020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILR57_006025 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_006030 PF12911 N-terminal TM domain of oligopeptide transport permease C ILR57_006030 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_006035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILR57_006035 PF00005 ABC transporter ILR57_006040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_006040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_006050 PF07715 TonB-dependent Receptor Plug Domain ILR57_006050 PF00593 TonB dependent receptor ILR57_006060 PF00929 Exonuclease ILR57_006065 PF01979 Amidohydrolase family ILR57_006070 PF00360 Phytochrome region ILR57_006070 PF00563 EAL domain ILR57_006070 PF00990 Diguanylate cyclase, GGDEF domain ILR57_006070 PF01590 GAF domain ILR57_006075 PF00764 Arginosuccinate synthase ILR57_006080 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_006080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_006095 PF05987 Bacterial protein of unknown function (DUF898) ILR57_006100 PF03180 NLPA lipoprotein ILR57_006110 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ILR57_006110 PF04717 Type VI secretion system, phage-baseplate injector ILR57_006110 PF13296 Putative type VI secretion system Rhs element Vgr ILR57_006115 PF05593 RHS Repeat ILR57_006115 PF03527 RHS protein ILR57_006155 PF00324 Amino acid permease ILR57_006160 PF01266 FAD dependent oxidoreductase ILR57_006165 PF00324 Amino acid permease ILR57_006175 PF07729 FCD domain ILR57_006175 PF00392 Bacterial regulatory proteins, gntR family ILR57_006185 PF00171 Aldehyde dehydrogenase family ILR57_006195 PF00202 Aminotransferase class-III ILR57_006200 PF04958 Arginine N-succinyltransferase beta subunit ILR57_006205 PF00324 Amino acid permease ILR57_006230 PF00171 Aldehyde dehydrogenase family ILR57_006250 PF00892 EamA-like transporter family ILR57_006255 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ILR57_006255 PF08666 SAF domain ILR57_006260 PF07690 Major Facilitator Superfamily ILR57_006265 PF13378 Enolase C-terminal domain-like ILR57_006270 PF00701 Dihydrodipicolinate synthetase family ILR57_006275 PF00171 Aldehyde dehydrogenase family ILR57_006280 PF00392 Bacterial regulatory proteins, gntR family ILR57_006280 PF07729 FCD domain ILR57_006285 PF07519 Tannase and feruloyl esterase ILR57_006300 PF03573 outer membrane porin, OprD family ILR57_006305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_006305 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_006305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_006315 PF00171 Aldehyde dehydrogenase family ILR57_006320 PF00378 Enoyl-CoA hydratase/isomerase ILR57_006325 PF07690 Major Facilitator Superfamily ILR57_006345 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_006345 PF00175 Oxidoreductase NAD-binding domain ILR57_006350 PF00355 Rieske [2Fe-2S] domain ILR57_006355 PF07690 Major Facilitator Superfamily ILR57_006360 PF03573 outer membrane porin, OprD family ILR57_006365 PF05199 GMC oxidoreductase ILR57_006370 PF07859 alpha/beta hydrolase fold ILR57_006375 PF00106 short chain dehydrogenase ILR57_006380 PF00743 Flavin-binding monooxygenase-like ILR57_006385 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR57_006385 PF12833 Helix-turn-helix domain ILR57_006390 PF04072 Leucine carboxyl methyltransferase ILR57_006395 PF00743 Flavin-binding monooxygenase-like ILR57_006400 PF00106 short chain dehydrogenase ILR57_006410 PF00440 Bacterial regulatory proteins, tetR family ILR57_006410 PF17932 Tetracyclin repressor-like, C-terminal domain ILR57_006415 PF17954 Quercetinase C-terminal cupin domain ILR57_006415 PF02678 Pirin ILR57_006425 PF00106 short chain dehydrogenase ILR57_006430 PF00743 Flavin-binding monooxygenase-like ILR57_006440 PF00860 Permease family ILR57_006445 PF00962 Adenosine/AMP deaminase ILR57_006450 PF01292 Prokaryotic cytochrome b561 ILR57_006460 PF01351 Ribonuclease HII ILR57_006465 PF02599 Global regulator protein family ILR57_006470 PF00696 Amino acid kinase family ILR57_006470 PF13840 ACT domain ILR57_006470 PF01842 ACT domain ILR57_006475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILR57_006475 PF01411 tRNA synthetases class II (A) ILR57_006475 PF02272 DHHA1 domain ILR57_006480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILR57_006480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILR57_006490 PF13393 Histidyl-tRNA synthetase ILR57_006495 PF00709 Adenylosuccinate synthetase ILR57_006510 PF00248 Aldo/keto reductase family ILR57_006515 PF00027 Cyclic nucleotide-binding domain ILR57_006515 PF13545 Crp-like helix-turn-helix domain ILR57_006525 PF02566 OsmC-like protein ILR57_006540 PF07724 AAA domain (Cdc48 subfamily) ILR57_006540 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_006540 PF17871 AAA lid domain ILR57_006540 PF02861 Clp amino terminal domain, pathogenicity island component ILR57_006540 PF10431 C-terminal, D2-small domain, of ClpB protein ILR57_006555 PF10672 S-adenosylmethionine-dependent methyltransferase ILR57_006555 PF02926 THUMP domain ILR57_006555 PF01170 Putative RNA methylase family UPF0020 ILR57_006565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILR57_006565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILR57_006570 PF01979 Amidohydrolase family ILR57_006575 PF00691 OmpA family ILR57_006575 PF13488 Glycine zipper ILR57_006585 PF00043 Glutathione S-transferase, C-terminal domain ILR57_006585 PF13417 Glutathione S-transferase, N-terminal domain ILR57_006745 PF02390 Putative methyltransferase ILR57_006755 PF00043 Glutathione S-transferase, C-terminal domain ILR57_006755 PF02798 Glutathione S-transferase, N-terminal domain ILR57_006765 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_006765 PF13192 Thioredoxin domain ILR57_006785 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILR57_006785 PF00578 AhpC/TSA family ILR57_006790 PF00271 Helicase conserved C-terminal domain ILR57_006790 PF04408 Helicase associated domain (HA2) ILR57_006790 PF11898 Domain of unknown function (DUF3418) ILR57_006790 PF00270 DEAD/DEAH box helicase ILR57_006790 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ILR57_006795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ILR57_006795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ILR57_006805 PF07690 Major Facilitator Superfamily ILR57_006810 PF03594 Benzoate membrane transport protein ILR57_006815 PF00106 short chain dehydrogenase ILR57_006820 PF00175 Oxidoreductase NAD-binding domain ILR57_006820 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_006820 PF00970 Oxidoreductase FAD-binding domain ILR57_006825 PF00866 Ring hydroxylating beta subunit ILR57_006830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR57_006830 PF00355 Rieske [2Fe-2S] domain ILR57_006835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_006835 PF03466 LysR substrate binding domain ILR57_006845 PF00403 Heavy-metal-associated domain ILR57_006850 PF09278 MerR, DNA binding ILR57_006850 PF00376 MerR family regulatory protein ILR57_006885 PF02601 Exonuclease VII, large subunit ILR57_006885 PF13742 OB-fold nucleic acid binding domain ILR57_006915 PF01810 LysE type translocator ILR57_006920 PF00313 'Cold-shock' DNA-binding domain ILR57_006930 PF03807 NADP oxidoreductase coenzyme F420-dependent ILR57_006930 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILR57_006955 PF07690 Major Facilitator Superfamily ILR57_006960 PF01638 HxlR-like helix-turn-helix ILR57_007030 PF00145 C-5 cytosine-specific DNA methylase ILR57_007045 PF00717 Peptidase S24-like ILR57_007075 PF00145 C-5 cytosine-specific DNA methylase ILR57_007250 PF03869 Arc-like DNA binding domain ILR57_007275 PF01464 Transglycosylase SLT domain ILR57_007275 PF01551 Peptidase family M23 ILR57_007275 PF10145 Phage-related minor tail protein ILR57_007320 PF00589 Phage integrase family ILR57_007330 PF01406 tRNA synthetases class I (C) catalytic domain ILR57_007330 PF09190 DALR domain ILR57_007335 PF01380 SIS domain ILR57_007335 PF00571 CBS domain ILR57_007350 PF03968 OstA-like protein ILR57_007355 PF00005 ABC transporter ILR57_007355 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILR57_007360 PF02321 Outer membrane efflux protein ILR57_007365 PF03412 Peptidase C39 family ILR57_007365 PF00664 ABC transporter transmembrane region ILR57_007365 PF00005 ABC transporter ILR57_007375 PF01205 Uncharacterized protein family UPF0029 ILR57_007380 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_007390 PF01596 O-methyltransferase ILR57_007400 PF11953 Domain of unknown function (DUF3470) ILR57_007400 PF00037 4Fe-4S binding domain ILR57_007410 PF01624 MutS domain I ILR57_007410 PF05188 MutS domain II ILR57_007410 PF00488 MutS domain V ILR57_007410 PF05192 MutS domain III ILR57_007410 PF05190 MutS family domain IV ILR57_007415 PF01037 Lrp/AsnC ligand binding domain ILR57_007420 PF00892 EamA-like transporter family ILR57_007425 PF03707 Bacterial signalling protein N terminal repeat ILR57_007425 PF00563 EAL domain ILR57_007425 PF00990 Diguanylate cyclase, GGDEF domain ILR57_007430 PF03279 Bacterial lipid A biosynthesis acyltransferase ILR57_007435 PF01544 CorA-like Mg2+ transporter protein ILR57_007450 PF07690 Major Facilitator Superfamily ILR57_007455 PF01177 Asp/Glu/Hydantoin racemase ILR57_007460 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_007465 PF00005 ABC transporter ILR57_007470 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_007495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR57_007495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR57_007520 PF04717 Type VI secretion system, phage-baseplate injector ILR57_007520 PF13296 Putative type VI secretion system Rhs element Vgr ILR57_007520 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ILR57_007535 PF05593 RHS Repeat ILR57_007535 PF03527 RHS protein ILR57_007550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_007555 PF01566 Natural resistance-associated macrophage protein ILR57_007560 PF03746 LamB/YcsF family ILR57_007565 PF07286 Protein of unknown function (DUF1445) ILR57_007575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_007575 PF00364 Biotin-requiring enzyme ILR57_007575 PF00289 Biotin carboxylase, N-terminal domain ILR57_007575 PF02785 Biotin carboxylase C-terminal domain ILR57_007580 PF00654 Voltage gated chloride channel ILR57_007625 PF00440 Bacterial regulatory proteins, tetR family ILR57_007635 PF13823 Alcohol dehydrogenase GroES-associated ILR57_007635 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_007635 PF00107 Zinc-binding dehydrogenase ILR57_007650 PF02785 Biotin carboxylase C-terminal domain ILR57_007650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_007650 PF00289 Biotin carboxylase, N-terminal domain ILR57_007655 PF02525 Flavodoxin-like fold ILR57_007660 PF01638 HxlR-like helix-turn-helix ILR57_007670 PF01402 Ribbon-helix-helix protein, copG family ILR57_007670 PF08753 NikR C terminal nickel binding domain ILR57_007675 PF01425 Amidase ILR57_007680 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR57_007685 PF00005 ABC transporter ILR57_007710 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ILR57_007725 PF05947 Type VI secretion system, TssF ILR57_007740 PF06761 Intracellular multiplication and human macrophage-killing ILR57_007740 PF14331 ImcF-related N-terminal domain ILR57_007740 PF06744 Type VI secretion protein IcmF C-terminal ILR57_007750 PF00691 OmpA family ILR57_007750 PF01389 OmpA-like transmembrane domain ILR57_007760 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_007760 PF07724 AAA domain (Cdc48 subfamily) ILR57_007760 PF17871 AAA lid domain ILR57_007760 PF10431 C-terminal, D2-small domain, of ClpB protein ILR57_007765 PF06812 ImpA, N-terminal, type VI secretion system ILR57_007770 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ILR57_007790 PF03466 LysR substrate binding domain ILR57_007790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_007800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILR57_007805 PF07690 Major Facilitator Superfamily ILR57_007820 PF02677 Epoxyqueuosine reductase QueH ILR57_007830 PF09278 MerR, DNA binding ILR57_007830 PF00376 MerR family regulatory protein ILR57_007840 PF00701 Dihydrodipicolinate synthetase family ILR57_007850 PF00392 Bacterial regulatory proteins, gntR family ILR57_007855 PF05544 Proline racemase ILR57_007860 PF01266 FAD dependent oxidoreductase ILR57_007870 PF04324 BFD-like [2Fe-2S] binding domain ILR57_007870 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_007880 PF00083 Sugar (and other) transporter ILR57_007885 PF00171 Aldehyde dehydrogenase family ILR57_007890 PF13520 Amino acid permease ILR57_007895 PF03315 Serine dehydratase beta chain ILR57_007895 PF03313 Serine dehydratase alpha chain ILR57_007900 PF01575 MaoC like domain ILR57_007900 PF00171 Aldehyde dehydrogenase family ILR57_007905 PF05138 Phenylacetic acid catabolic protein ILR57_007910 PF06243 Phenylacetic acid degradation B ILR57_007915 PF05138 Phenylacetic acid catabolic protein ILR57_007920 PF01883 Iron-sulfur cluster assembly protein ILR57_007925 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_007925 PF00175 Oxidoreductase NAD-binding domain ILR57_007925 PF00970 Oxidoreductase FAD-binding domain ILR57_007930 PF00378 Enoyl-CoA hydratase/isomerase ILR57_007935 PF00378 Enoyl-CoA hydratase/isomerase ILR57_007940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR57_007940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR57_007940 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ILR57_007945 PF02803 Thiolase, C-terminal domain ILR57_007945 PF00108 Thiolase, N-terminal domain ILR57_007950 PF00501 AMP-binding enzyme ILR57_007950 PF14535 AMP-binding enzyme C-terminal domain ILR57_007955 PF08223 PaaX-like protein C-terminal domain ILR57_007955 PF07848 PaaX-like protein ILR57_007960 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_007965 PF03061 Thioesterase superfamily ILR57_007970 PF13086 AAA domain ILR57_007970 PF13086 AAA domain ILR57_007970 PF13087 AAA domain ILR57_007970 PF13195 Protein of unknown function (DUF4011) ILR57_007970 PF13087 AAA domain ILR57_007970 PF13195 Protein of unknown function (DUF4011) ILR57_007980 PF00300 Histidine phosphatase superfamily (branch 1) ILR57_008005 PF00199 Catalase ILR57_008010 PF01292 Prokaryotic cytochrome b561 ILR57_008030 PF12697 Alpha/beta hydrolase family ILR57_008035 PF01613 Flavin reductase like domain ILR57_008040 PF00296 Luciferase-like monooxygenase ILR57_008045 PF00171 Aldehyde dehydrogenase family ILR57_008055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILR57_008065 PF00171 Aldehyde dehydrogenase family ILR57_008070 PF02627 Carboxymuconolactone decarboxylase family ILR57_008075 PF03466 LysR substrate binding domain ILR57_008075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008080 PF02525 Flavodoxin-like fold ILR57_008085 PF01614 Bacterial transcriptional regulator ILR57_008085 PF09339 IclR helix-turn-helix domain ILR57_008090 PF01494 FAD binding domain ILR57_008095 PF01168 Alanine racemase, N-terminal domain ILR57_008095 PF00842 Alanine racemase, C-terminal domain ILR57_008100 PF00392 Bacterial regulatory proteins, gntR family ILR57_008100 PF07702 UTRA domain ILR57_008110 PF00005 ABC transporter ILR57_008110 PF08402 TOBE domain ILR57_008115 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008120 PF01266 FAD dependent oxidoreductase ILR57_008125 PF00266 Aminotransferase class-V ILR57_008130 PF13419 Haloacid dehalogenase-like hydrolase ILR57_008135 PF01810 LysE type translocator ILR57_008150 PF03466 LysR substrate binding domain ILR57_008150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008155 PF00682 HMGL-like ILR57_008160 PF18140 Propionyl-coenzyme A carboxylase BT domain ILR57_008160 PF02785 Biotin carboxylase C-terminal domain ILR57_008160 PF00289 Biotin carboxylase, N-terminal domain ILR57_008160 PF00364 Biotin-requiring enzyme ILR57_008160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_008165 PF00378 Enoyl-CoA hydratase/isomerase ILR57_008170 PF01039 Carboxyl transferase domain ILR57_008175 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_008175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_008175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_008180 PF00440 Bacterial regulatory proteins, tetR family ILR57_008185 PF00501 AMP-binding enzyme ILR57_008185 PF13193 AMP-binding enzyme C-terminal domain ILR57_008205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008205 PF03466 LysR substrate binding domain ILR57_008240 PF00994 Probable molybdopterin binding domain ILR57_008240 PF18146 Damage-inducible protein CinA KH domain ILR57_008240 PF02464 Competence-damaged protein ILR57_008250 PF06628 Catalase-related immune-responsive ILR57_008250 PF18011 C-terminal domain found in long catalases ILR57_008250 PF00199 Catalase ILR57_008275 PF00717 Peptidase S24-like ILR57_008285 PF01037 Lrp/AsnC ligand binding domain ILR57_008285 PF13404 AsnC-type helix-turn-helix domain ILR57_008295 PF09308 LuxQ, periplasmic ILR57_008295 PF00072 Response regulator receiver domain ILR57_008295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_008295 PF00512 His Kinase A (phospho-acceptor) domain ILR57_008300 PF00072 Response regulator receiver domain ILR57_008315 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008320 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008325 PF00005 ABC transporter ILR57_008330 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR57_008335 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR57_008345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008345 PF03466 LysR substrate binding domain ILR57_008350 PF01810 LysE type translocator ILR57_008355 PF00266 Aminotransferase class-V ILR57_008365 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_008370 PF00581 Rhodanese-like domain ILR57_008380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008380 PF03466 LysR substrate binding domain ILR57_008385 PF02798 Glutathione S-transferase, N-terminal domain ILR57_008390 PF02798 Glutathione S-transferase, N-terminal domain ILR57_008390 PF14834 Glutathione S-transferase, C-terminal domain ILR57_008395 PF03466 LysR substrate binding domain ILR57_008395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008400 PF03788 LrgA family ILR57_008405 PF04172 LrgB-like family ILR57_008410 PF00155 Aminotransferase class I and II ILR57_008410 PF00392 Bacterial regulatory proteins, gntR family ILR57_008425 PF07690 Major Facilitator Superfamily ILR57_008435 PF03466 LysR substrate binding domain ILR57_008435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008440 PF16957 Malonate decarboxylase, alpha subunit, transporter ILR57_008445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ILR57_008450 PF06857 Malonate decarboxylase delta subunit (MdcD) ILR57_008455 PF01039 Carboxyl transferase domain ILR57_008465 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ILR57_008470 PF00698 Acyl transferase domain ILR57_008485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008485 PF03466 LysR substrate binding domain ILR57_008490 PF00155 Aminotransferase class I and II ILR57_008490 PF00392 Bacterial regulatory proteins, gntR family ILR57_008505 PF01654 Cytochrome bd terminal oxidase subunit I ILR57_008520 PF00296 Luciferase-like monooxygenase ILR57_008525 PF00083 Sugar (and other) transporter ILR57_008535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILR57_008540 PF00005 ABC transporter ILR57_008545 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ILR57_008555 PF01177 Asp/Glu/Hydantoin racemase ILR57_008560 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILR57_008570 PF03466 LysR substrate binding domain ILR57_008570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008580 PF13382 Adenine deaminase C-terminal domain ILR57_008580 PF01979 Amidohydrolase family ILR57_008590 PF03960 ArsC family ILR57_008595 PF01022 Bacterial regulatory protein, arsR family ILR57_008600 PF01758 Sodium Bile acid symporter family ILR57_008605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008605 PF03466 LysR substrate binding domain ILR57_008620 PF13192 Thioredoxin domain ILR57_008620 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_008635 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_008640 PF00588 SpoU rRNA Methylase family ILR57_008645 PF14579 Helix-hairpin-helix motif ILR57_008645 PF02811 PHP domain ILR57_008645 PF01336 OB-fold nucleic acid binding domain ILR57_008645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ILR57_008645 PF07733 Bacterial DNA polymerase III alpha NTPase domain ILR57_008650 PF17763 Glutaminase/Asparaginase C-terminal domain ILR57_008650 PF00710 Asparaginase, N-terminal ILR57_008655 PF00375 Sodium:dicarboxylate symporter family ILR57_008660 PF00155 Aminotransferase class I and II ILR57_008665 PF01641 SelR domain ILR57_008670 PF00255 Glutathione peroxidase ILR57_008675 PF12852 Cupin ILR57_008675 PF12833 Helix-turn-helix domain ILR57_008685 PF00155 Aminotransferase class I and II ILR57_008690 PF08335 GlnD PII-uridylyltransferase ILR57_008690 PF01966 HD domain ILR57_008690 PF01909 Nucleotidyltransferase domain ILR57_008695 PF02222 ATP-grasp domain ILR57_008705 PF05437 Branched-chain amino acid transport protein (AzlD) ILR57_008710 PF03591 AzlC protein ILR57_008735 PF06071 Protein of unknown function (DUF933) ILR57_008735 PF01926 50S ribosome-binding GTPase ILR57_008740 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008745 PF09383 NIL domain ILR57_008745 PF00005 ABC transporter ILR57_008750 PF03180 NLPA lipoprotein ILR57_008755 PF03180 NLPA lipoprotein ILR57_008760 PF00296 Luciferase-like monooxygenase ILR57_008770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR57_008770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_008785 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008790 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_008795 PF00005 ABC transporter ILR57_008805 PF01037 Lrp/AsnC ligand binding domain ILR57_008810 PF01709 Transcriptional regulator ILR57_008820 PF00440 Bacterial regulatory proteins, tetR family ILR57_008840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_008840 PF03466 LysR substrate binding domain ILR57_008850 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILR57_008860 PF00892 EamA-like transporter family ILR57_008880 PF13953 PapC C-terminal domain ILR57_008880 PF00577 Outer membrane usher protein ILR57_008880 PF13954 PapC N-terminal domain ILR57_008885 PF02753 Pili assembly chaperone PapD, C-terminal domain ILR57_008885 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILR57_008890 PF16970 Type-1 fimbrial protein, A ILR57_008905 PF06968 Biotin and Thiamin Synthesis associated domain ILR57_008905 PF04055 Radical SAM superfamily ILR57_008910 PF08331 Domain of unknown function (DUF1730) ILR57_008915 PF01256 Carbohydrate kinase ILR57_008915 PF03853 YjeF-related protein N-terminus ILR57_008920 PF02075 Crossover junction endodeoxyribonuclease RuvC ILR57_008935 PF00905 Penicillin binding protein transpeptidase domain ILR57_008955 PF02772 S-adenosylmethionine synthetase, central domain ILR57_008955 PF00438 S-adenosylmethionine synthetase, N-terminal domain ILR57_008955 PF02773 S-adenosylmethionine synthetase, C-terminal domain ILR57_008960 PF00456 Transketolase, thiamine diphosphate binding domain ILR57_008960 PF02780 Transketolase, C-terminal domain ILR57_008960 PF02779 Transketolase, pyrimidine binding domain ILR57_008970 PF04264 YceI-like domain ILR57_008980 PF09992 Phosphodiester glycosidase ILR57_008990 PF05958 tRNA (Uracil-5-)-methyltransferase ILR57_008995 PF04229 GrpB protein ILR57_009000 PF00171 Aldehyde dehydrogenase family ILR57_009000 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ILR57_009000 PF14850 DNA-binding domain of Proline dehydrogenase ILR57_009000 PF01619 Proline dehydrogenase ILR57_009005 PF01037 Lrp/AsnC ligand binding domain ILR57_009010 PF00474 Sodium:solute symporter family ILR57_009015 PF02146 Sir2 family ILR57_009020 PF01597 Glycine cleavage H-protein ILR57_009025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR57_009025 PF12833 Helix-turn-helix domain ILR57_009035 PF00664 ABC transporter transmembrane region ILR57_009035 PF00005 ABC transporter ILR57_009040 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ILR57_009045 PF06912 Protein of unknown function (DUF1275) ILR57_009050 PF00375 Sodium:dicarboxylate symporter family ILR57_009065 PF08007 Cupin superfamily protein ILR57_009070 PF02545 Maf-like protein ILR57_009080 PF00162 Phosphoglycerate kinase ILR57_009090 PF01116 Fructose-bisphosphate aldolase class-II ILR57_009095 PF00639 PPIC-type PPIASE domain ILR57_009095 PF09312 SurA N-terminal domain ILR57_009100 PF04453 LPS transport system D ILR57_009100 PF03968 OstA-like protein ILR57_009105 PF01636 Phosphotransferase enzyme family ILR57_009110 PF00483 Nucleotidyl transferase ILR57_009115 PF02527 rRNA small subunit methyltransferase G ILR57_009120 PF13614 AAA domain ILR57_009125 PF17762 HTH domain found in ParB protein ILR57_009125 PF02195 ParB-like nuclease domain ILR57_009130 PF01618 MotA/TolQ/ExbB proton channel family ILR57_009140 PF00664 ABC transporter transmembrane region ILR57_009140 PF00005 ABC transporter ILR57_009145 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ILR57_009150 PF02348 Cytidylyltransferase ILR57_009155 PF09115 DNA polymerase III, delta subunit, C terminal ILR57_009165 PF01026 TatD related DNase ILR57_009180 PF02501 Type II secretion system (T2SS), protein I ILR57_009180 PF07963 Prokaryotic N-terminal methylation motif ILR57_009185 PF11612 Type II secretion system (T2SS), protein J ILR57_009185 PF07963 Prokaryotic N-terminal methylation motif ILR57_009190 PF03934 Type II secretion system (T2SS), protein K ILR57_009200 PF03167 Uracil DNA glycosylase superfamily ILR57_009210 PF14437 MafB19-like deaminase ILR57_009220 PF02224 Cytidylate kinase ILR57_009225 PF00575 S1 RNA binding domain ILR57_009230 PF00216 Bacterial DNA-binding protein ILR57_009240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILR57_009250 PF00743 Flavin-binding monooxygenase-like ILR57_009260 PF03969 AFG1-like ATPase ILR57_009265 PF01274 Malate synthase ILR57_009275 PF02472 Biopolymer transport protein ExbD/TolR ILR57_009280 PF02472 Biopolymer transport protein ExbD/TolR ILR57_009285 PF01618 MotA/TolQ/ExbB proton channel family ILR57_009295 PF07715 TonB-dependent Receptor Plug Domain ILR57_009295 PF00593 TonB dependent receptor ILR57_009300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILR57_009310 PF01432 Peptidase family M3 ILR57_009315 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_009320 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_009325 PF00005 ABC transporter ILR57_009325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILR57_009340 PF00459 Inositol monophosphatase family ILR57_009350 PF01649 Ribosomal protein S20 ILR57_009355 PF13460 NAD(P)H-binding ILR57_009360 PF03737 Aldolase/RraA ILR57_009380 PF02559 CarD-like/TRCF domain ILR57_009380 PF00270 DEAD/DEAH box helicase ILR57_009380 PF03461 TRCF domain ILR57_009380 PF17757 UvrB interaction domain ILR57_009380 PF00271 Helicase conserved C-terminal domain ILR57_009390 PF00211 Adenylate and Guanylate cyclase catalytic domain ILR57_009395 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_009400 PF00012 Hsp70 protein ILR57_009405 PF00226 DnaJ domain ILR57_009405 PF07743 HSCB C-terminal oligomerisation domain ILR57_009410 PF01521 Iron-sulphur cluster biosynthesis ILR57_009415 PF01592 NifU-like N terminal domain ILR57_009420 PF00266 Aminotransferase class-V ILR57_009425 PF02082 Transcriptional regulator ILR57_009440 PF00216 Bacterial DNA-binding protein ILR57_009445 PF00639 PPIC-type PPIASE domain ILR57_009445 PF09312 SurA N-terminal domain ILR57_009450 PF12833 Helix-turn-helix domain ILR57_009450 PF12852 Cupin ILR57_009455 PF00487 Fatty acid desaturase ILR57_009460 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_009460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_009460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_009465 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_009465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_009465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_009470 PF03109 ABC1 family ILR57_009480 PF04073 Aminoacyl-tRNA editing domain ILR57_009485 PF06276 Ferric iron reductase FhuF-like transporter ILR57_009485 PF04183 IucA / IucC family ILR57_009490 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ILR57_009495 PF07690 Major Facilitator Superfamily ILR57_009500 PF04183 IucA / IucC family ILR57_009500 PF06276 Ferric iron reductase FhuF-like transporter ILR57_009505 PF06276 Ferric iron reductase FhuF-like transporter ILR57_009505 PF04183 IucA / IucC family ILR57_009515 PF03737 Aldolase/RraA ILR57_009520 PF07715 TonB-dependent Receptor Plug Domain ILR57_009520 PF00593 TonB dependent receptor ILR57_009545 PF13419 Haloacid dehalogenase-like hydrolase ILR57_009555 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ILR57_009560 PF02277 Phosphoribosyltransferase ILR57_009565 PF00300 Histidine phosphatase superfamily (branch 1) ILR57_009575 PF02654 Cobalamin-5-phosphate synthase ILR57_009580 PF00793 DAHP synthetase I family ILR57_009585 PF01925 Sulfite exporter TauE/SafE ILR57_009605 PF07715 TonB-dependent Receptor Plug Domain ILR57_009605 PF00593 TonB dependent receptor ILR57_009610 PF02684 Lipid-A-disaccharide synthetase ILR57_009620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_009625 PF00005 ABC transporter ILR57_009660 PF01230 HIT domain ILR57_009690 PF08241 Methyltransferase domain ILR57_009695 PF00561 alpha/beta hydrolase fold ILR57_009700 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR57_009710 PF02575 YbaB/EbfC DNA-binding family ILR57_009715 PF02132 RecR protein ILR57_009715 PF13662 Toprim domain ILR57_009720 PF01612 3'-5' exonuclease ILR57_009720 PF00570 HRDC domain ILR57_009740 PF05166 YcgL domain ILR57_009750 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_009750 PF17862 AAA+ lid domain ILR57_009750 PF01434 Peptidase family M41 ILR57_009760 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_009765 PF05175 Methyltransferase small domain ILR57_009770 PF01264 Chorismate synthase ILR57_009775 PF00990 Diguanylate cyclase, GGDEF domain ILR57_009775 PF08448 PAS fold ILR57_009790 PF04055 Radical SAM superfamily ILR57_009795 PF00676 Dehydrogenase E1 component ILR57_009800 PF02780 Transketolase, C-terminal domain ILR57_009800 PF02779 Transketolase, pyrimidine binding domain ILR57_009805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR57_009805 PF00364 Biotin-requiring enzyme ILR57_009805 PF02817 e3 binding domain ILR57_009810 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_009810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR57_009815 PF00106 short chain dehydrogenase ILR57_009820 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_009820 PF00107 Zinc-binding dehydrogenase ILR57_009825 PF01062 Bestrophin, RFP-TM, chloride channel ILR57_009830 PF02954 Bacterial regulatory protein, Fis family ILR57_009830 PF00072 Response regulator receiver domain ILR57_009830 PF00158 Sigma-54 interaction domain ILR57_009835 PF04273 Putative phosphatase (DUF442) ILR57_009835 PF00753 Metallo-beta-lactamase superfamily ILR57_009840 PF00753 Metallo-beta-lactamase superfamily ILR57_009840 PF04273 Putative phosphatase (DUF442) ILR57_009845 PF01925 Sulfite exporter TauE/SafE ILR57_009860 PF06445 GyrI-like small molecule binding domain ILR57_009860 PF12833 Helix-turn-helix domain ILR57_009865 PF01638 HxlR-like helix-turn-helix ILR57_009870 PF02525 Flavodoxin-like fold ILR57_009875 PF02417 Chromate transporter ILR57_009880 PF00392 Bacterial regulatory proteins, gntR family ILR57_009880 PF07702 UTRA domain ILR57_009895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILR57_009900 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_009905 PF00005 ABC transporter ILR57_009920 PF00083 Sugar (and other) transporter ILR57_009925 PF07715 TonB-dependent Receptor Plug Domain ILR57_009925 PF00593 TonB dependent receptor ILR57_009930 PF10415 Fumarase C C-terminus ILR57_009930 PF00206 Lyase ILR57_009945 PF03466 LysR substrate binding domain ILR57_009945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_009950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_009950 PF03466 LysR substrate binding domain ILR57_009955 PF02803 Thiolase, C-terminal domain ILR57_009955 PF00108 Thiolase, N-terminal domain ILR57_009960 PF02667 Short chain fatty acid transporter ILR57_009965 PF01144 Coenzyme A transferase ILR57_009970 PF01144 Coenzyme A transferase ILR57_009975 PF03466 LysR substrate binding domain ILR57_009975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_009995 PF12833 Helix-turn-helix domain ILR57_009995 PF06719 AraC-type transcriptional regulator N-terminus ILR57_010000 PF07690 Major Facilitator Superfamily ILR57_010005 PF01738 Dienelactone hydrolase family ILR57_010020 PF01613 Flavin reductase like domain ILR57_010030 PF12833 Helix-turn-helix domain ILR57_010030 PF14525 AraC-binding-like domain ILR57_010035 PF00175 Oxidoreductase NAD-binding domain ILR57_010035 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_010035 PF00970 Oxidoreductase FAD-binding domain ILR57_010040 PF00866 Ring hydroxylating beta subunit ILR57_010045 PF00355 Rieske [2Fe-2S] domain ILR57_010045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR57_010050 PF03459 TOBE domain ILR57_010050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010060 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_010065 PF03459 TOBE domain ILR57_010065 PF00005 ABC transporter ILR57_010070 PF00106 short chain dehydrogenase ILR57_010075 PF00857 Isochorismatase family ILR57_010075 PF00550 Phosphopantetheine attachment site ILR57_010085 PF00149 Calcineurin-like phosphoesterase ILR57_010090 PF13089 Polyphosphate kinase N-terminal domain ILR57_010090 PF13090 Polyphosphate kinase C-terminal domain 2 ILR57_010090 PF17941 Polyphosphate kinase C-terminal domain 1 ILR57_010090 PF02503 Polyphosphate kinase middle domain ILR57_010095 PF08042 PqqA family ILR57_010100 PF12706 Beta-lactamase superfamily domain ILR57_010105 PF03070 TENA/THI-4/PQQC family ILR57_010110 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ILR57_010115 PF04055 Radical SAM superfamily ILR57_010115 PF13186 Iron-sulfur cluster-binding domain ILR57_010120 PF01244 Membrane dipeptidase (Peptidase family M19) ILR57_010135 PF13091 PLD-like domain ILR57_010150 PF00199 Catalase ILR57_010160 PF00107 Zinc-binding dehydrogenase ILR57_010160 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_010180 PF00005 ABC transporter ILR57_010180 PF17755 UvrA DNA-binding domain ILR57_010180 PF17760 UvrA interaction domain ILR57_010185 PF00873 AcrB/AcrD/AcrF family ILR57_010190 PF00529 HlyD membrane-fusion protein of T1SS ILR57_010190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_010195 PF00486 Transcriptional regulatory protein, C terminal ILR57_010195 PF00072 Response regulator receiver domain ILR57_010200 PF16527 Two-component sensor protein CpxA, periplasmic domain ILR57_010200 PF00672 HAMP domain ILR57_010200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_010200 PF00512 His Kinase A (phospho-acceptor) domain ILR57_010210 PF02311 AraC-like ligand binding domain ILR57_010210 PF12833 Helix-turn-helix domain ILR57_010245 PF00550 Phosphopantetheine attachment site ILR57_010245 PF07993 Male sterility protein ILR57_010250 PF07690 Major Facilitator Superfamily ILR57_010255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010275 PF01975 Survival protein SurE ILR57_010300 PF07690 Major Facilitator Superfamily ILR57_010305 PF13533 Biotin-lipoyl like ILR57_010320 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILR57_010325 PF14572 Phosphoribosyl synthetase-associated domain ILR57_010325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILR57_010345 PF00005 ABC transporter ILR57_010350 PF01032 FecCD transport family ILR57_010360 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_010360 PF00107 Zinc-binding dehydrogenase ILR57_010375 PF12833 Helix-turn-helix domain ILR57_010375 PF06719 AraC-type transcriptional regulator N-terminus ILR57_010380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILR57_010380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILR57_010385 PF07690 Major Facilitator Superfamily ILR57_010390 PF01370 NAD dependent epimerase/dehydratase family ILR57_010395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010395 PF03466 LysR substrate binding domain ILR57_010405 PF00920 Dehydratase family ILR57_010410 PF00171 Aldehyde dehydrogenase family ILR57_010415 PF01047 MarR family ILR57_010420 PF01613 Flavin reductase like domain ILR57_010425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR57_010430 PF07690 Major Facilitator Superfamily ILR57_010430 PF00083 Sugar (and other) transporter ILR57_010435 PF00171 Aldehyde dehydrogenase family ILR57_010440 PF03328 HpcH/HpaI aldolase/citrate lyase family ILR57_010445 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR57_010450 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ILR57_010455 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILR57_010460 PF00171 Aldehyde dehydrogenase family ILR57_010465 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR57_010470 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR57_010480 PF07690 Major Facilitator Superfamily ILR57_010485 PF00579 tRNA synthetases class I (W and Y) ILR57_010500 PF00171 Aldehyde dehydrogenase family ILR57_010520 PF01266 FAD dependent oxidoreductase ILR57_010530 PF00893 Small Multidrug Resistance protein ILR57_010540 PF01266 FAD dependent oxidoreductase ILR57_010545 PF12833 Helix-turn-helix domain ILR57_010545 PF00072 Response regulator receiver domain ILR57_010560 PF13533 Biotin-lipoyl like ILR57_010575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010575 PF03466 LysR substrate binding domain ILR57_010585 PF08450 SMP-30/Gluconolactonase/LRE-like region ILR57_010590 PF00392 Bacterial regulatory proteins, gntR family ILR57_010590 PF07702 UTRA domain ILR57_010600 PF04909 Amidohydrolase ILR57_010605 PF07690 Major Facilitator Superfamily ILR57_010610 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ILR57_010645 PF01546 Peptidase family M20/M25/M40 ILR57_010645 PF07687 Peptidase dimerisation domain ILR57_010655 PF00999 Sodium/hydrogen exchanger family ILR57_010655 PF02254 TrkA-N domain ILR57_010660 PF07995 Glucose / Sorbosone dehydrogenase ILR57_010665 PF03466 LysR substrate binding domain ILR57_010665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010670 PF00857 Isochorismatase family ILR57_010680 PF08359 YsiA-like protein, C-terminal region ILR57_010680 PF00440 Bacterial regulatory proteins, tetR family ILR57_010685 PF12706 Beta-lactamase superfamily domain ILR57_010695 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_010705 PF09278 MerR, DNA binding ILR57_010705 PF00376 MerR family regulatory protein ILR57_010715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_010715 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_010720 PF01047 MarR family ILR57_010725 PF07859 alpha/beta hydrolase fold ILR57_010745 PF06628 Catalase-related immune-responsive ILR57_010745 PF00199 Catalase ILR57_010750 PF00561 alpha/beta hydrolase fold ILR57_010760 PF00171 Aldehyde dehydrogenase family ILR57_010765 PF00107 Zinc-binding dehydrogenase ILR57_010765 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_010770 PF00474 Sodium:solute symporter family ILR57_010775 PF04341 Protein of unknown function, DUF485 ILR57_010780 PF00501 AMP-binding enzyme ILR57_010780 PF13193 AMP-binding enzyme C-terminal domain ILR57_010785 PF00158 Sigma-54 interaction domain ILR57_010785 PF02954 Bacterial regulatory protein, Fis family ILR57_010785 PF06506 Propionate catabolism activator ILR57_010795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_010795 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_010795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_010810 PF01636 Phosphotransferase enzyme family ILR57_010815 PF00171 Aldehyde dehydrogenase family ILR57_010825 PF07690 Major Facilitator Superfamily ILR57_010830 PF00920 Dehydratase family ILR57_010835 PF07729 FCD domain ILR57_010835 PF00392 Bacterial regulatory proteins, gntR family ILR57_010845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010845 PF03466 LysR substrate binding domain ILR57_010850 PF13378 Enolase C-terminal domain-like ILR57_010850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILR57_010855 PF02426 Muconolactone delta-isomerase ILR57_010860 PF00775 Dioxygenase ILR57_010860 PF04444 Catechol dioxygenase N terminus ILR57_010865 PF01144 Coenzyme A transferase ILR57_010870 PF01144 Coenzyme A transferase ILR57_010875 PF00108 Thiolase, N-terminal domain ILR57_010875 PF02803 Thiolase, C-terminal domain ILR57_010880 PF12146 Serine aminopeptidase, S33 ILR57_010885 PF01804 Penicillin amidase ILR57_010890 PF00171 Aldehyde dehydrogenase family ILR57_010900 PF07833 Copper amine oxidase N-terminal domain ILR57_010900 PF01179 Copper amine oxidase, enzyme domain ILR57_010900 PF02728 Copper amine oxidase, N3 domain ILR57_010900 PF02727 Copper amine oxidase, N2 domain ILR57_010905 PF02311 AraC-like ligand binding domain ILR57_010905 PF12833 Helix-turn-helix domain ILR57_010910 PF01613 Flavin reductase like domain ILR57_010915 PF00175 Oxidoreductase NAD-binding domain ILR57_010915 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_010930 PF00355 Rieske [2Fe-2S] domain ILR57_010930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILR57_010945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ILR57_010950 PF01425 Amidase ILR57_010960 PF07690 Major Facilitator Superfamily ILR57_010970 PF00106 short chain dehydrogenase ILR57_010985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_010985 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_010985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_010990 PF03466 LysR substrate binding domain ILR57_010990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_010995 PF01614 Bacterial transcriptional regulator ILR57_010995 PF09339 IclR helix-turn-helix domain ILR57_011000 PF00753 Metallo-beta-lactamase superfamily ILR57_011010 PF04143 Sulphur transport ILR57_011020 PF01011 PQQ enzyme repeat ILR57_011020 PF13360 PQQ-like domain ILR57_011025 PF04966 Carbohydrate-selective porin, OprB family ILR57_011030 PF05048 Periplasmic copper-binding protein (NosD) ILR57_011035 PF01487 Type I 3-dehydroquinase ILR57_011040 PF00775 Dioxygenase ILR57_011045 PF00775 Dioxygenase ILR57_011045 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ILR57_011050 PF02627 Carboxymuconolactone decarboxylase family ILR57_011055 PF07690 Major Facilitator Superfamily ILR57_011060 PF00561 alpha/beta hydrolase fold ILR57_011065 PF00206 Lyase ILR57_011065 PF10397 Adenylosuccinate lyase C-terminus ILR57_011070 PF02803 Thiolase, C-terminal domain ILR57_011070 PF00108 Thiolase, N-terminal domain ILR57_011075 PF01144 Coenzyme A transferase ILR57_011080 PF01144 Coenzyme A transferase ILR57_011085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ILR57_011090 PF04977 Septum formation initiator ILR57_011095 PF04239 Protein of unknown function (DUF421) ILR57_011100 PF03952 Enolase, N-terminal domain ILR57_011100 PF00113 Enolase, C-terminal TIM barrel domain ILR57_011105 PF00793 DAHP synthetase I family ILR57_011110 PF00117 Glutamine amidotransferase class-I ILR57_011110 PF06418 CTP synthase N-terminus ILR57_011140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_011140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_011155 PF00793 DAHP synthetase I family ILR57_011160 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ILR57_011165 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_011165 PF07724 AAA domain (Cdc48 subfamily) ILR57_011165 PF17871 AAA lid domain ILR57_011165 PF02861 Clp amino terminal domain, pathogenicity island component ILR57_011165 PF10431 C-terminal, D2-small domain, of ClpB protein ILR57_011170 PF02617 ATP-dependent Clp protease adaptor protein ClpS ILR57_011180 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILR57_011180 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILR57_011195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ILR57_011200 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_011200 PF00585 C-terminal regulatory domain of Threonine dehydratase ILR57_011205 PF02080 TrkA-C domain ILR57_011205 PF02254 TrkA-N domain ILR57_011210 PF02386 Cation transport protein ILR57_011215 PF02253 Phospholipase A1 ILR57_011220 PF05193 Peptidase M16 inactive domain ILR57_011220 PF00675 Insulinase (Peptidase family M16) ILR57_011220 PF08367 Peptidase M16C associated ILR57_011225 PF00593 TonB dependent receptor ILR57_011225 PF07715 TonB-dependent Receptor Plug Domain ILR57_011230 PF00294 pfkB family carbohydrate kinase ILR57_011240 PF07290 Protein of unknown function (DUF1449) ILR57_011250 PF01654 Cytochrome bd terminal oxidase subunit I ILR57_011255 PF02322 Cytochrome bd terminal oxidase subunit II ILR57_011260 PF08173 Membrane bound YbgT-like protein ILR57_011270 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ILR57_011280 PF02881 SRP54-type protein, helical bundle domain ILR57_011280 PF00448 SRP54-type protein, GTPase domain ILR57_011305 PF00478 IMP dehydrogenase / GMP reductase domain ILR57_011305 PF00571 CBS domain ILR57_011310 PF00202 Aminotransferase class-III ILR57_011315 PF00462 Glutaredoxin ILR57_011325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_011325 PF03466 LysR substrate binding domain ILR57_011330 PF00557 Metallopeptidase family M24 ILR57_011335 PF05525 Branched-chain amino acid transport protein ILR57_011360 PF02896 PEP-utilising enzyme, TIM barrel domain ILR57_011360 PF00381 PTS HPr component phosphorylation site ILR57_011360 PF05524 PEP-utilising enzyme, N-terminal ILR57_011360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILR57_011360 PF00391 PEP-utilising enzyme, mobile domain ILR57_011365 PF00294 pfkB family carbohydrate kinase ILR57_011370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILR57_011370 PF02378 Phosphotransferase system, EIIC ILR57_011390 PF03707 Bacterial signalling protein N terminal repeat ILR57_011390 PF00990 Diguanylate cyclase, GGDEF domain ILR57_011390 PF00563 EAL domain ILR57_011400 PF07995 Glucose / Sorbosone dehydrogenase ILR57_011405 PF02586 SOS response associated peptidase (SRAP) ILR57_011410 PF01740 STAS domain ILR57_011410 PF00916 Sulfate permease family ILR57_011415 PF05922 Peptidase inhibitor I9 ILR57_011415 PF00082 Subtilase family ILR57_011425 PF00324 Amino acid permease ILR57_011430 PF00266 Aminotransferase class-V ILR57_011435 PF01037 Lrp/AsnC ligand binding domain ILR57_011460 PF13419 Haloacid dehalogenase-like hydrolase ILR57_011465 PF01479 S4 domain ILR57_011470 PF00154 recA bacterial DNA recombination protein ILR57_011475 PF02631 RecX family ILR57_011490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ILR57_011490 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_011495 PF07977 FabA-like domain ILR57_011500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ILR57_011500 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_011510 PF01103 Surface antigen ILR57_011510 PF07244 Surface antigen variable number repeat ILR57_011515 PF02163 Peptidase family M50 ILR57_011515 PF13180 PDZ domain ILR57_011515 PF17820 PDZ domain ILR57_011520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ILR57_011520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ILR57_011520 PF13288 DXP reductoisomerase C-terminal domain ILR57_011530 PF01255 Putative undecaprenyl diphosphate synthase ILR57_011535 PF01765 Ribosome recycling factor ILR57_011540 PF00696 Amino acid kinase family ILR57_011545 PF04055 Radical SAM superfamily ILR57_011545 PF18693 TRAM domain ILR57_011545 PF00919 Uncharacterized protein family UPF0004 ILR57_011550 PF00512 His Kinase A (phospho-acceptor) domain ILR57_011550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_011550 PF00989 PAS fold ILR57_011555 PF00158 Sigma-54 interaction domain ILR57_011555 PF02954 Bacterial regulatory protein, Fis family ILR57_011555 PF00072 Response regulator receiver domain ILR57_011560 PF00440 Bacterial regulatory proteins, tetR family ILR57_011570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILR57_011570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILR57_011580 PF02542 YgbB family ILR57_011590 PF01266 FAD dependent oxidoreductase ILR57_011610 PF10415 Fumarase C C-terminus ILR57_011610 PF00206 Lyase ILR57_011615 PF16363 GDP-mannose 4,6 dehydratase ILR57_011620 PF02635 DsrE/DsrF-like family ILR57_011640 PF00892 EamA-like transporter family ILR57_011645 PF00155 Aminotransferase class I and II ILR57_011645 PF00392 Bacterial regulatory proteins, gntR family ILR57_011650 PF01638 HxlR-like helix-turn-helix ILR57_011655 PF00994 Probable molybdopterin binding domain ILR57_011655 PF03454 MoeA C-terminal region (domain IV) ILR57_011655 PF03453 MoeA N-terminal region (domain I and II) ILR57_011660 PF01967 MoaC family ILR57_011660 PF00994 Probable molybdopterin binding domain ILR57_011665 PF02391 MoaE protein ILR57_011675 PF04055 Radical SAM superfamily ILR57_011675 PF06463 Molybdenum Cofactor Synthesis C ILR57_011680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR57_011680 PF00384 Molybdopterin oxidoreductase ILR57_011680 PF01568 Molydopterin dinucleotide binding domain ILR57_011685 PF12804 MobA-like NTP transferase domain ILR57_011690 PF04324 BFD-like [2Fe-2S] binding domain ILR57_011690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILR57_011690 PF00384 Molybdopterin oxidoreductase ILR57_011690 PF01568 Molydopterin dinucleotide binding domain ILR57_011695 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILR57_011695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR57_011695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR57_011695 PF04324 BFD-like [2Fe-2S] binding domain ILR57_011695 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_011700 PF04324 BFD-like [2Fe-2S] binding domain ILR57_011700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR57_011700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_011700 PF13806 Rieske-like [2Fe-2S] domain ILR57_011700 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILR57_011700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR57_011710 PF00072 Response regulator receiver domain ILR57_011710 PF00486 Transcriptional regulatory protein, C terminal ILR57_011715 PF00005 ABC transporter ILR57_011725 PF00817 impB/mucB/samB family ILR57_011725 PF11799 impB/mucB/samB family C-terminal domain ILR57_011725 PF13438 Domain of unknown function (DUF4113) ILR57_011730 PF01220 Dehydroquinase class II ILR57_011735 PF00364 Biotin-requiring enzyme ILR57_011740 PF02785 Biotin carboxylase C-terminal domain ILR57_011740 PF00289 Biotin carboxylase, N-terminal domain ILR57_011740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_011750 PF12832 MFS_1 like family ILR57_011770 PF00182 Chitinase class I ILR57_011845 PF03869 Arc-like DNA binding domain ILR57_011990 PF02498 BRO family, N-terminal domain ILR57_011990 PF10548 P22AR C-terminal domain ILR57_012150 PF01645 Conserved region in glutamate synthase ILR57_012165 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ILR57_012165 PF01565 FAD binding domain ILR57_012170 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILR57_012180 PF00465 Iron-containing alcohol dehydrogenase ILR57_012185 PF03061 Thioesterase superfamily ILR57_012190 PF04185 Phosphoesterase family ILR57_012190 PF05506 Domain of unknown function (DUF756) ILR57_012200 PF12169 DNA polymerase III subunits gamma and tau domain III ILR57_012200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ILR57_012200 PF12170 DNA polymerase III tau subunit V interacting with alpha ILR57_012205 PF07690 Major Facilitator Superfamily ILR57_012215 PF00144 Beta-lactamase ILR57_012220 PF01575 MaoC like domain ILR57_012230 PF02803 Thiolase, C-terminal domain ILR57_012230 PF00108 Thiolase, N-terminal domain ILR57_012240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_012240 PF03466 LysR substrate binding domain ILR57_012245 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILR57_012250 PF01810 LysE type translocator ILR57_012255 PF01037 Lrp/AsnC ligand binding domain ILR57_012260 PF03594 Benzoate membrane transport protein ILR57_012265 PF02308 MgtC family ILR57_012270 PF00690 Cation transporter/ATPase, N-terminus ILR57_012270 PF00689 Cation transporting ATPase, C-terminus ILR57_012295 PF00582 Universal stress protein family ILR57_012300 PF12848 ABC transporter ILR57_012300 PF00005 ABC transporter ILR57_012320 PF00593 TonB dependent receptor ILR57_012320 PF07715 TonB-dependent Receptor Plug Domain ILR57_012350 PF00924 Mechanosensitive ion channel ILR57_012355 PF07715 TonB-dependent Receptor Plug Domain ILR57_012355 PF00593 TonB dependent receptor ILR57_012360 PF00440 Bacterial regulatory proteins, tetR family ILR57_012370 PF01037 Lrp/AsnC ligand binding domain ILR57_012375 PF01817 Chorismate mutase type II ILR57_012395 PF11940 Domain of unknown function (DUF3458) Ig-like fold ILR57_012395 PF01433 Peptidase family M1 domain ILR57_012395 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ILR57_012410 PF02110 Hydroxyethylthiazole kinase family ILR57_012415 PF06445 GyrI-like small molecule binding domain ILR57_012425 PF14493 Helix-turn-helix domain ILR57_012425 PF05970 PIF1-like helicase ILR57_012430 PF00465 Iron-containing alcohol dehydrogenase ILR57_012445 PF00171 Aldehyde dehydrogenase family ILR57_012450 PF13520 Amino acid permease ILR57_012455 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ILR57_012460 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ILR57_012465 PF00117 Glutamine amidotransferase class-I ILR57_012465 PF00958 GMP synthase C terminal domain ILR57_012465 PF02540 NAD synthase ILR57_012470 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR57_012470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ILR57_012475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILR57_012480 PF00149 Calcineurin-like phosphoesterase ILR57_012490 PF00881 Nitroreductase family ILR57_012500 PF17209 Hfq protein ILR57_012510 PF01119 DNA mismatch repair protein, C-terminal domain ILR57_012510 PF08676 MutL C terminal dimerisation domain ILR57_012515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ILR57_012520 PF01479 S4 domain ILR57_012520 PF00849 RNA pseudouridylate synthase ILR57_012535 PF01479 S4 domain ILR57_012535 PF00849 RNA pseudouridylate synthase ILR57_012545 PF04284 Protein of unknown function (DUF441) ILR57_012550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_012550 PF03466 LysR substrate binding domain ILR57_012565 PF07690 Major Facilitator Superfamily ILR57_012570 PF00027 Cyclic nucleotide-binding domain ILR57_012570 PF00520 Ion transport protein ILR57_012580 PF00330 Aconitase family (aconitate hydratase) ILR57_012580 PF06434 Aconitate hydratase 2 N-terminus ILR57_012580 PF11791 Aconitate B N-terminal domain ILR57_012595 PF01103 Surface antigen ILR57_012595 PF07244 Surface antigen variable number repeat ILR57_012595 PF17243 POTRA domain TamA domain 1 ILR57_012600 PF07690 Major Facilitator Superfamily ILR57_012605 PF03232 Ubiquinone biosynthesis protein COQ7 ILR57_012615 PF00120 Glutamine synthetase, catalytic domain ILR57_012620 PF00486 Transcriptional regulatory protein, C terminal ILR57_012620 PF00072 Response regulator receiver domain ILR57_012625 PF13493 Domain of unknown function (DUF4118) ILR57_012625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_012625 PF00512 His Kinase A (phospho-acceptor) domain ILR57_012625 PF02702 Osmosensitive K+ channel His kinase sensor domain ILR57_012630 PF02669 K+-transporting ATPase, c chain ILR57_012640 PF03814 Potassium-transporting ATPase A subunit ILR57_012650 PF02152 Dihydroneopterin aldolase ILR57_012655 PF03109 ABC1 family ILR57_012660 PF00899 ThiF family ILR57_012665 PF01613 Flavin reductase like domain ILR57_012670 PF00501 AMP-binding enzyme ILR57_012670 PF13193 AMP-binding enzyme C-terminal domain ILR57_012675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_012675 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_012675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_012680 PF00106 short chain dehydrogenase ILR57_012685 PF12833 Helix-turn-helix domain ILR57_012690 PF09084 NMT1/THI5 like ILR57_012695 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_012700 PF17827 PrmC N-terminal domain ILR57_012700 PF13847 Methyltransferase domain ILR57_012705 PF00472 RF-1 domain ILR57_012705 PF03462 PCRF domain ILR57_012715 PF03466 LysR substrate binding domain ILR57_012715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_012730 PF00296 Luciferase-like monooxygenase ILR57_012740 PF13994 PgaD-like protein ILR57_012745 PF00535 Glycosyl transferase family 2 ILR57_012750 PF14883 Hypothetical glycosyl hydrolase family 13 ILR57_012750 PF01522 Polysaccharide deacetylase ILR57_012760 PF03618 Kinase/pyrophosphorylase ILR57_012765 PF00391 PEP-utilising enzyme, mobile domain ILR57_012765 PF02896 PEP-utilising enzyme, TIM barrel domain ILR57_012765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ILR57_012775 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ILR57_012775 PF06481 COX Aromatic Rich Motif ILR57_012780 PF00115 Cytochrome C and Quinol oxidase polypeptide I ILR57_012785 PF00510 Cytochrome c oxidase subunit III ILR57_012790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ILR57_012795 PF01040 UbiA prenyltransferase family ILR57_012800 PF01250 Ribosomal protein S6 ILR57_012805 PF01084 Ribosomal protein S18 ILR57_012810 PF01281 Ribosomal protein L9, N-terminal domain ILR57_012810 PF03948 Ribosomal protein L9, C-terminal domain ILR57_012815 PF03796 DnaB-like helicase C terminal domain ILR57_012815 PF00772 DnaB-like helicase N terminal domain ILR57_012820 PF01168 Alanine racemase, N-terminal domain ILR57_012820 PF00842 Alanine racemase, C-terminal domain ILR57_012830 PF08379 Bacterial transglutaminase-like N-terminal region ILR57_012830 PF01841 Transglutaminase-like superfamily ILR57_012840 PF14403 Circularly permuted ATP-grasp type 2 ILR57_012850 PF01134 Glucose inhibited division protein A ILR57_012850 PF13932 GidA associated domain ILR57_012870 PF02954 Bacterial regulatory protein, Fis family ILR57_012875 PF01808 AICARFT/IMPCHase bienzyme ILR57_012875 PF02142 MGS-like domain ILR57_012880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ILR57_012880 PF02843 Phosphoribosylglycinamide synthetase, C domain ILR57_012880 PF02844 Phosphoribosylglycinamide synthetase, N domain ILR57_012885 PF03180 NLPA lipoprotein ILR57_012890 PF09383 NIL domain ILR57_012890 PF00005 ABC transporter ILR57_012895 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_012900 PF16123 Hydroxyacylglutathione hydrolase C-terminus ILR57_012900 PF00753 Metallo-beta-lactamase superfamily ILR57_012910 PF00375 Sodium:dicarboxylate symporter family ILR57_012930 PF07995 Glucose / Sorbosone dehydrogenase ILR57_012935 PF00892 EamA-like transporter family ILR57_012940 PF01177 Asp/Glu/Hydantoin racemase ILR57_012950 PF02470 MlaD protein ILR57_012955 PF04403 Paraquat-inducible protein A ILR57_012985 PF08946 Osmosensory transporter coiled coil ILR57_012985 PF00083 Sugar (and other) transporter ILR57_012995 PF07729 FCD domain ILR57_012995 PF00392 Bacterial regulatory proteins, gntR family ILR57_013005 PF03616 Sodium/glutamate symporter ILR57_013010 PF00561 alpha/beta hydrolase fold ILR57_013035 PF04076 Bacterial OB fold (BOF) protein ILR57_013065 PF00324 Amino acid permease ILR57_013070 PF00171 Aldehyde dehydrogenase family ILR57_013075 PF00202 Aminotransferase class-III ILR57_013080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_013080 PF03466 LysR substrate binding domain ILR57_013105 PF03793 PASTA domain ILR57_013105 PF00069 Protein kinase domain ILR57_013125 PF00814 Glycoprotease family ILR57_013130 PF01165 Ribosomal protein S21 ILR57_013135 PF09424 Yqey-like protein ILR57_013140 PF01435 Peptidase family M48 ILR57_013145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR57_013145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR57_013160 PF00156 Phosphoribosyl transferase domain ILR57_013165 PF02674 Colicin V production protein ILR57_013170 PF01180 Dihydroorotate dehydrogenase ILR57_013190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ILR57_013190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ILR57_013195 PF00881 Nitroreductase family ILR57_013205 PF00271 Helicase conserved C-terminal domain ILR57_013205 PF00270 DEAD/DEAH box helicase ILR57_013210 PF00313 'Cold-shock' DNA-binding domain ILR57_013220 PF00140 Sigma-70 factor, region 1.2 ILR57_013220 PF04542 Sigma-70 region 2 ILR57_013220 PF04545 Sigma-70, region 4 ILR57_013225 PF04241 Protein of unknown function (DUF423) ILR57_013235 PF05690 Thiazole biosynthesis protein ThiG ILR57_013245 PF03883 Peroxide stress protein YaaA ILR57_013255 PF06956 Regulator of RNA terminal phosphate cyclase ILR57_013255 PF00158 Sigma-54 interaction domain ILR57_013260 PF00753 Metallo-beta-lactamase superfamily ILR57_013265 PF01139 tRNA-splicing ligase RtcB ILR57_013280 PF01137 RNA 3'-terminal phosphate cyclase ILR57_013280 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ILR57_013285 PF07687 Peptidase dimerisation domain ILR57_013285 PF01546 Peptidase family M20/M25/M40 ILR57_013295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILR57_013300 PF00800 Prephenate dehydratase ILR57_013300 PF01817 Chorismate mutase type II ILR57_013300 PF01842 ACT domain ILR57_013305 PF00756 Putative esterase ILR57_013310 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_013310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_013310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_013315 PF00375 Sodium:dicarboxylate symporter family ILR57_013320 PF02885 Glycosyl transferase family, helical bundle domain ILR57_013320 PF00591 Glycosyl transferase family, a/b domain ILR57_013325 PF07023 Protein of unknown function (DUF1315) ILR57_013330 PF01513 ATP-NAD kinase ILR57_013335 PF00912 Transglycosylase ILR57_013335 PF14814 Bifunctional transglycosylase second domain ILR57_013335 PF00905 Penicillin binding protein transpeptidase domain ILR57_013345 PF00293 NUDIX domain ILR57_013355 PF08521 Two-component sensor kinase N-terminal ILR57_013355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_013355 PF00512 His Kinase A (phospho-acceptor) domain ILR57_013360 PF00486 Transcriptional regulatory protein, C terminal ILR57_013360 PF00072 Response regulator receiver domain ILR57_013370 PF00437 Type II/IV secretion system protein ILR57_013370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILR57_013380 PF01980 tRNA-methyltransferase O ILR57_013380 PF18389 TrmO C-terminal domain ILR57_013385 PF00970 Oxidoreductase FAD-binding domain ILR57_013385 PF00175 Oxidoreductase NAD-binding domain ILR57_013390 PF02567 Phenazine biosynthesis-like protein ILR57_013395 PF00392 Bacterial regulatory proteins, gntR family ILR57_013395 PF00155 Aminotransferase class I and II ILR57_013400 PF01136 Peptidase family U32 ILR57_013400 PF16325 Peptidase family U32 C-terminal domain ILR57_013405 PF00037 4Fe-4S binding domain ILR57_013410 PF00893 Small Multidrug Resistance protein ILR57_013415 PF00005 ABC transporter ILR57_013420 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_013425 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_013430 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR57_013435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_013435 PF03466 LysR substrate binding domain ILR57_013440 PF13533 Biotin-lipoyl like ILR57_013445 PF00873 AcrB/AcrD/AcrF family ILR57_013450 PF02321 Outer membrane efflux protein ILR57_013455 PF00464 Serine hydroxymethyltransferase ILR57_013480 PF00005 ABC transporter ILR57_013485 PF01061 ABC-2 type transporter ILR57_013490 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ILR57_013490 PF14489 QueF-like protein ILR57_013500 PF01098 Cell cycle protein ILR57_013505 PF13406 Transglycosylase SLT domain ILR57_013510 PF03330 Lytic transglycolase ILR57_013510 PF05036 Sporulation related domain ILR57_013530 PF12833 Helix-turn-helix domain ILR57_013540 PF00889 Elongation factor TS ILR57_013545 PF00318 Ribosomal protein S2 ILR57_013550 PF00557 Metallopeptidase family M24 ILR57_013560 PF07690 Major Facilitator Superfamily ILR57_013570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_013570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR57_013575 PF04055 Radical SAM superfamily ILR57_013580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_013580 PF09317 Domain of unknown function (DUF1974) ILR57_013580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_013595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ILR57_013595 PF05221 S-adenosyl-L-homocysteine hydrolase ILR57_013600 PF02219 Methylenetetrahydrofolate reductase ILR57_013605 PF04452 RNA methyltransferase ILR57_013615 PF00390 Malic enzyme, N-terminal domain ILR57_013615 PF03949 Malic enzyme, NAD binding domain ILR57_013615 PF01515 Phosphate acetyl/butaryl transferase ILR57_013620 PF01743 Poly A polymerase head domain ILR57_013620 PF12627 Probable RNA and SrmB- binding site of polymerase A ILR57_013625 PF13180 PDZ domain ILR57_013630 PF01784 NIF3 (NGG1p interacting factor 3) ILR57_013635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILR57_013635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILR57_013670 PF01040 UbiA prenyltransferase family ILR57_013675 PF04345 Chorismate lyase ILR57_013680 PF00120 Glutamine synthetase, catalytic domain ILR57_013680 PF03951 Glutamine synthetase, beta-Grasp domain ILR57_013685 PF00854 POT family ILR57_013695 PF00117 Glutamine amidotransferase class-I ILR57_013700 PF01433 Peptidase family M1 domain ILR57_013700 PF11838 ERAP1-like C-terminal domain ILR57_013705 PF00593 TonB dependent receptor ILR57_013705 PF07715 TonB-dependent Receptor Plug Domain ILR57_013710 PF02885 Glycosyl transferase family, helical bundle domain ILR57_013710 PF00591 Glycosyl transferase family, a/b domain ILR57_013715 PF00218 Indole-3-glycerol phosphate synthase ILR57_013730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILR57_013730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILR57_013735 PF01799 [2Fe-2S] binding domain ILR57_013735 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_013740 PF01227 GTP cyclohydrolase I ILR57_013745 PF00144 Beta-lactamase ILR57_013760 PF05675 Protein of unknown function (DUF817) ILR57_013765 PF01208 Uroporphyrinogen decarboxylase (URO-D) ILR57_013775 PF00425 chorismate binding enzyme ILR57_013780 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ILR57_013780 PF01648 4'-phosphopantetheinyl transferase superfamily ILR57_013785 PF00975 Thioesterase domain ILR57_013790 PF00005 ABC transporter ILR57_013795 PF00005 ABC transporter ILR57_013805 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILR57_013810 PF00550 Phosphopantetheine attachment site ILR57_013810 PF00857 Isochorismatase family ILR57_013815 PF13193 AMP-binding enzyme C-terminal domain ILR57_013815 PF00501 AMP-binding enzyme ILR57_013820 PF00668 Condensation domain ILR57_013820 PF00501 AMP-binding enzyme ILR57_013820 PF00550 Phosphopantetheine attachment site ILR57_013825 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ILR57_013830 PF07715 TonB-dependent Receptor Plug Domain ILR57_013830 PF00593 TonB dependent receptor ILR57_013835 PF01497 Periplasmic binding protein ILR57_013840 PF00005 ABC transporter ILR57_013845 PF01032 FecCD transport family ILR57_013850 PF01032 FecCD transport family ILR57_013855 PF00668 Condensation domain ILR57_013855 PF00550 Phosphopantetheine attachment site ILR57_013855 PF00975 Thioesterase domain ILR57_013855 PF00501 AMP-binding enzyme ILR57_013855 PF13193 AMP-binding enzyme C-terminal domain ILR57_013860 PF00501 AMP-binding enzyme ILR57_013860 PF13193 AMP-binding enzyme C-terminal domain ILR57_013860 PF00668 Condensation domain ILR57_013860 PF00550 Phosphopantetheine attachment site ILR57_013870 PF13309 HTH domain ILR57_013870 PF08348 YheO-like PAS domain ILR57_013875 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_013880 PF02678 Pirin ILR57_013880 PF17954 Quercetinase C-terminal cupin domain ILR57_013900 PF12852 Cupin ILR57_013900 PF12833 Helix-turn-helix domain ILR57_013905 PF00106 short chain dehydrogenase ILR57_013910 PF16884 N-terminal domain of oxidoreductase ILR57_013910 PF00107 Zinc-binding dehydrogenase ILR57_013915 PF12833 Helix-turn-helix domain ILR57_013915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR57_013920 PF01370 NAD dependent epimerase/dehydratase family ILR57_013930 PF00561 alpha/beta hydrolase fold ILR57_013935 PF00743 Flavin-binding monooxygenase-like ILR57_013945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_013945 PF03466 LysR substrate binding domain ILR57_013950 PF00857 Isochorismatase family ILR57_013990 PF04328 Selenoprotein, putative ILR57_013995 PF13722 5TM C-terminal transporter carbon starvation CstA ILR57_013995 PF02554 Carbon starvation protein CstA ILR57_014000 PF01132 Elongation factor P (EF-P) OB domain ILR57_014000 PF08207 Elongation factor P (EF-P) KOW-like domain ILR57_014000 PF09285 Elongation factor P, C-terminal ILR57_014005 PF04055 Radical SAM superfamily ILR57_014015 PF12792 CSS motif domain associated with EAL ILR57_014015 PF00563 EAL domain ILR57_014020 PF01197 Ribosomal protein L31 ILR57_014025 PF13593 SBF-like CPA transporter family (DUF4137) ILR57_014030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR57_014035 PF07690 Major Facilitator Superfamily ILR57_014040 PF05362 Lon protease (S16) C-terminal proteolytic domain ILR57_014040 PF13654 AAA domain ILR57_014045 PF03466 LysR substrate binding domain ILR57_014045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_014050 PF01551 Peptidase family M23 ILR57_014050 PF01476 LysM domain ILR57_014055 PF01975 Survival protein SurE ILR57_014070 PF00768 D-alanyl-D-alanine carboxypeptidase ILR57_014070 PF07943 Penicillin-binding protein 5, C-terminal domain ILR57_014075 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_014080 PF13344 Haloacid dehalogenase-like hydrolase ILR57_014080 PF00293 NUDIX domain ILR57_014090 PF04356 Protein of unknown function (DUF489) ILR57_014095 PF08328 Adenylosuccinate lyase C-terminal ILR57_014095 PF00206 Lyase ILR57_014110 PF08496 Peptidase family S49 N-terminal ILR57_014110 PF01343 Peptidase family S49 ILR57_014115 PF00005 ABC transporter ILR57_014120 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_014125 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_014130 PF12849 PBP superfamily domain ILR57_014135 PF00324 Amino acid permease ILR57_014140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILR57_014140 PF00205 Thiamine pyrophosphate enzyme, central domain ILR57_014140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILR57_014145 PF01037 Lrp/AsnC ligand binding domain ILR57_014150 PF00171 Aldehyde dehydrogenase family ILR57_014155 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILR57_014160 PF00202 Aminotransferase class-III ILR57_014170 PF17754 MftR C-terminal domain ILR57_014170 PF00440 Bacterial regulatory proteins, tetR family ILR57_014180 PF00487 Fatty acid desaturase ILR57_014185 PF00970 Oxidoreductase FAD-binding domain ILR57_014185 PF00111 2Fe-2S iron-sulfur cluster binding domain ILR57_014185 PF00175 Oxidoreductase NAD-binding domain ILR57_014190 PF00440 Bacterial regulatory proteins, tetR family ILR57_014200 PF18337 RapA N-terminal Tudor like domain ILR57_014200 PF18339 RapA N-terminal Tudor like domain 1 ILR57_014200 PF12137 RNA polymerase recycling family C-terminal ILR57_014200 PF00176 SNF2 family N-terminal domain ILR57_014200 PF00271 Helicase conserved C-terminal domain ILR57_014205 PF00849 RNA pseudouridylate synthase ILR57_014215 PF00202 Aminotransferase class-III ILR57_014220 PF02581 Thiamine monophosphate synthase ILR57_014245 PF00675 Insulinase (Peptidase family M16) ILR57_014245 PF05193 Peptidase M16 inactive domain ILR57_014250 PF02567 Phenazine biosynthesis-like protein ILR57_014255 PF00375 Sodium:dicarboxylate symporter family ILR57_014260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_014260 PF03466 LysR substrate binding domain ILR57_014265 PF06779 Uncharacterised MFS-type transporter YbfB ILR57_014285 PF00180 Isocitrate/isopropylmalate dehydrogenase ILR57_014290 PF00849 RNA pseudouridylate synthase ILR57_014295 PF03971 Monomeric isocitrate dehydrogenase ILR57_014305 PF07943 Penicillin-binding protein 5, C-terminal domain ILR57_014305 PF00768 D-alanyl-D-alanine carboxypeptidase ILR57_014310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_014315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILR57_014325 PF03060 Nitronate monooxygenase ILR57_014330 PF01207 Dihydrouridine synthase (Dus) ILR57_014335 PF07759 Protein of unknown function (DUF1615) ILR57_014345 PF00696 Amino acid kinase family ILR57_014345 PF01472 PUA domain ILR57_014350 PF01018 GTP1/OBG ILR57_014350 PF01926 50S ribosome-binding GTPase ILR57_014365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILR57_014365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILR57_014370 PF00892 EamA-like transporter family ILR57_014380 PF17757 UvrB interaction domain ILR57_014380 PF12344 Ultra-violet resistance protein B ILR57_014380 PF04851 Type III restriction enzyme, res subunit ILR57_014380 PF02151 UvrB/uvrC motif ILR57_014380 PF00271 Helicase conserved C-terminal domain ILR57_014390 PF17151 Periplasmic sensor domain ILR57_014390 PF00990 Diguanylate cyclase, GGDEF domain ILR57_014400 PF00155 Aminotransferase class I and II ILR57_014410 PF00012 Hsp70 protein ILR57_014440 PF00106 short chain dehydrogenase ILR57_014445 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ILR57_014450 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ILR57_014455 PF02565 Recombination protein O C terminal ILR57_014455 PF11967 Recombination protein O N terminal ILR57_014465 PF07650 KH domain ILR57_014465 PF01926 50S ribosome-binding GTPase ILR57_014470 PF00035 Double-stranded RNA binding motif ILR57_014470 PF14622 Ribonuclease-III-like ILR57_014480 PF10502 Signal peptidase, peptidase S26 ILR57_014485 PF06421 GTP-binding protein LepA C-terminus ILR57_014485 PF03144 Elongation factor Tu domain 2 ILR57_014485 PF00679 Elongation factor G C-terminus ILR57_014485 PF00009 Elongation factor Tu GTP binding domain ILR57_014490 PF13302 Acetyltransferase (GNAT) domain ILR57_014500 PF13180 PDZ domain ILR57_014505 PF02910 Fumarate reductase flavoprotein C-term ILR57_014505 PF00890 FAD binding domain ILR57_014515 PF02223 Thymidylate kinase ILR57_014520 PF02618 YceG-like family ILR57_014525 PF01063 Amino-transferase class IV ILR57_014540 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_014545 PF00528 Binding-protein-dependent transport system inner membrane component ILR57_014550 PF00005 ABC transporter ILR57_014550 PF12857 TOBE-like domain ILR57_014555 PF03466 LysR substrate binding domain ILR57_014555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_014565 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_014565 PF14602 Hexapeptide repeat of succinyl-transferase ILR57_014565 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ILR57_014575 PF06508 Queuosine biosynthesis protein QueC ILR57_014590 PF00578 AhpC/TSA family ILR57_014600 PF01467 Cytidylyltransferase-like ILR57_014600 PF00293 NUDIX domain ILR57_014605 PF00378 Enoyl-CoA hydratase/isomerase ILR57_014610 PF01784 NIF3 (NGG1p interacting factor 3) ILR57_014615 PF07690 Major Facilitator Superfamily ILR57_014620 PF02769 AIR synthase related protein, C-terminal domain ILR57_014620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ILR57_014620 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ILR57_014625 PF01966 HD domain ILR57_014630 PF07499 RuvA, C-terminal domain ILR57_014630 PF01330 RuvA N terminal domain ILR57_014635 PF17864 RuvB AAA lid domain ILR57_014635 PF05496 Holliday junction DNA helicase RuvB P-loop domain ILR57_014635 PF05491 RuvB C-terminal winged helix domain ILR57_014640 PF07687 Peptidase dimerisation domain ILR57_014640 PF01546 Peptidase family M20/M25/M40 ILR57_014645 PF03061 Thioesterase superfamily ILR57_014650 PF01618 MotA/TolQ/ExbB proton channel family ILR57_014655 PF02472 Biopolymer transport protein ExbD/TolR ILR57_014665 PF07676 WD40-like Beta Propeller Repeat ILR57_014665 PF04052 TolB amino-terminal domain ILR57_014670 PF00691 OmpA family ILR57_014680 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ILR57_014685 PF00588 SpoU rRNA Methylase family ILR57_014685 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILR57_014715 PF11638 DnaA N-terminal domain ILR57_014715 PF08299 Bacterial dnaA protein helix-turn-helix ILR57_014715 PF00308 Bacterial dnaA protein ILR57_014720 PF01594 AI-2E family transporter ILR57_014725 PF00586 AIR synthase related protein, N-terminal domain ILR57_014725 PF02769 AIR synthase related protein, C-terminal domain ILR57_014730 PF00551 Formyl transferase ILR57_014735 PF12697 Alpha/beta hydrolase family ILR57_014740 PF06965 Na+/H+ antiporter 1 ILR57_014740 PF01343 Peptidase family S49 ILR57_014750 PF03772 Competence protein ILR57_014750 PF13567 Domain of unknown function (DUF4131) ILR57_014750 PF00753 Metallo-beta-lactamase superfamily ILR57_014755 PF00005 ABC transporter ILR57_014760 PF12704 MacB-like periplasmic core domain ILR57_014760 PF02687 FtsX-like permease family ILR57_014770 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ILR57_014785 PF00266 Aminotransferase class-V ILR57_014795 PF13533 Biotin-lipoyl like ILR57_014815 PF00535 Glycosyl transferase family 2 ILR57_014830 PF00521 DNA gyrase/topoisomerase IV, subunit A ILR57_014830 PF03989 DNA gyrase C-terminal domain, beta-propeller ILR57_014835 PF01012 Electron transfer flavoprotein domain ILR57_014835 PF00766 Electron transfer flavoprotein FAD-binding domain ILR57_014840 PF01012 Electron transfer flavoprotein domain ILR57_014845 PF02899 Phage integrase, N-terminal SAM-like domain ILR57_014845 PF00589 Phage integrase family ILR57_014850 PF01810 LysE type translocator ILR57_014855 PF00561 alpha/beta hydrolase fold ILR57_014860 PF01678 Diaminopimelate epimerase ILR57_014865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ILR57_014865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILR57_014875 PF00324 Amino acid permease ILR57_014880 PF18073 Rubredoxin metal binding domain ILR57_014890 PF00152 tRNA synthetases class II (D, K and N) ILR57_014895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR57_014895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR57_014895 PF11890 Domain of unknown function (DUF3410) ILR57_014900 PF06803 Protein of unknown function (DUF1232) ILR57_014905 PF02634 FdhD/NarQ family ILR57_014910 PF00384 Molybdopterin oxidoreductase ILR57_014915 PF02595 Glycerate kinase family ILR57_014930 PF00881 Nitroreductase family ILR57_014950 PF09857 Putative toxin of bacterial toxin-antitoxin pair ILR57_014975 PF00501 AMP-binding enzyme ILR57_014975 PF13193 AMP-binding enzyme C-terminal domain ILR57_014975 PF00975 Thioesterase domain ILR57_014975 PF00550 Phosphopantetheine attachment site ILR57_014975 PF00668 Condensation domain ILR57_014990 PF03449 Transcription elongation factor, N-terminal ILR57_014990 PF01272 Transcription elongation factor, GreA/GreB, C-term ILR57_014995 PF01464 Transglycosylase SLT domain ILR57_014995 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILR57_015005 PF01171 PP-loop family ILR57_015010 PF01464 Transglycosylase SLT domain ILR57_015015 PF01435 Peptidase family M48 ILR57_015025 PF00873 AcrB/AcrD/AcrF family ILR57_015030 PF03009 Glycerophosphoryl diester phosphodiesterase family ILR57_015035 PF00753 Metallo-beta-lactamase superfamily ILR57_015040 PF01219 Prokaryotic diacylglycerol kinase ILR57_015045 PF00118 TCP-1/cpn60 chaperonin family ILR57_015050 PF00166 Chaperonin 10 Kd subunit ILR57_015060 PF00149 Calcineurin-like phosphoesterase ILR57_015065 PF00781 Diacylglycerol kinase catalytic domain ILR57_015070 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ILR57_015070 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ILR57_015075 PF01266 FAD dependent oxidoreductase ILR57_015075 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ILR57_015080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILR57_015080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILR57_015085 PF00083 Sugar (and other) transporter ILR57_015100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ILR57_015100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ILR57_015115 PF09423 PhoD-like phosphatase ILR57_015115 PF16655 PhoD-like phosphatase, N-terminal domain ILR57_015135 PF00809 Pterin binding enzyme ILR57_015140 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_015140 PF17862 AAA+ lid domain ILR57_015140 PF01434 Peptidase family M41 ILR57_015140 PF06480 FtsH Extracellular ILR57_015145 PF01728 FtsJ-like methyltransferase ILR57_015150 PF01985 CRS1 / YhbY (CRM) domain ILR57_015165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ILR57_015165 PF00117 Glutamine amidotransferase class-I ILR57_015170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_015170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ILR57_015170 PF02142 MGS-like domain ILR57_015175 PF03449 Transcription elongation factor, N-terminal ILR57_015175 PF01272 Transcription elongation factor, GreA/GreB, C-term ILR57_015180 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_015185 PF00582 Universal stress protein family ILR57_015190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILR57_015200 PF09587 Bacterial capsule synthesis protein PGA_cap ILR57_015215 PF00999 Sodium/hydrogen exchanger family ILR57_015220 PF04228 Putative neutral zinc metallopeptidase ILR57_015225 PF05661 Protein of unknown function (DUF808) ILR57_015230 PF00579 tRNA synthetases class I (W and Y) ILR57_015235 PF02629 CoA binding domain ILR57_015235 PF00549 CoA-ligase ILR57_015240 PF08442 ATP-grasp domain ILR57_015240 PF00549 CoA-ligase ILR57_015245 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_015245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR57_015250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR57_015250 PF00364 Biotin-requiring enzyme ILR57_015250 PF02817 e3 binding domain ILR57_015255 PF02779 Transketolase, pyrimidine binding domain ILR57_015255 PF16870 2-oxoglutarate dehydrogenase C-terminal ILR57_015255 PF16078 2-oxoglutarate dehydrogenase N-terminus ILR57_015255 PF00676 Dehydrogenase E1 component ILR57_015270 PF13085 2Fe-2S iron-sulfur cluster binding domain ILR57_015275 PF00890 FAD binding domain ILR57_015275 PF02910 Fumarate reductase flavoprotein C-term ILR57_015280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILR57_015285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILR57_015290 PF00285 Citrate synthase, C-terminal domain ILR57_015300 PF17773 UPF0176 acylphosphatase like domain ILR57_015300 PF00581 Rhodanese-like domain ILR57_015315 PF04545 Sigma-70, region 4 ILR57_015315 PF04539 Sigma-70 region 3 ILR57_015315 PF04542 Sigma-70 region 2 ILR57_015315 PF00140 Sigma-70 factor, region 1.2 ILR57_015315 PF03979 Sigma-70 factor, region 1.1 ILR57_015315 PF04546 Sigma-70, non-essential region ILR57_015320 PF04359 Protein of unknown function (DUF493) ILR57_015325 PF03099 Biotin/lipoate A/B protein ligase family ILR57_015335 PF00465 Iron-containing alcohol dehydrogenase ILR57_015340 PF13520 Amino acid permease ILR57_015345 PF03358 NADPH-dependent FMN reductase ILR57_015350 PF01638 HxlR-like helix-turn-helix ILR57_015355 PF00588 SpoU rRNA Methylase family ILR57_015360 PF14824 Sirohaem biosynthesis protein central ILR57_015360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILR57_015360 PF10414 Sirohaem synthase dimerisation region ILR57_015365 PF02403 Seryl-tRNA synthetase N-terminal domain ILR57_015365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR57_015375 PF03548 Outer membrane lipoprotein carrier protein LolA ILR57_015380 PF01016 Ribosomal L27 protein ILR57_015385 PF00829 Ribosomal prokaryotic L21 protein ILR57_015395 PF00348 Polyprenyl synthetase ILR57_015405 PF01569 PAP2 superfamily ILR57_015410 PF00529 HlyD membrane-fusion protein of T1SS ILR57_015410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_015415 PF00873 AcrB/AcrD/AcrF family ILR57_015420 PF02321 Outer membrane efflux protein ILR57_015425 PF01906 Putative heavy-metal-binding ILR57_015430 PF01906 Putative heavy-metal-binding ILR57_015450 PF00133 tRNA synthetases class I (I, L, M and V) ILR57_015450 PF10458 Valyl tRNA synthetase tRNA binding arm ILR57_015450 PF08264 Anticodon-binding domain of tRNA ILR57_015470 PF03466 LysR substrate binding domain ILR57_015470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_015475 PF00909 Ammonium Transporter Family ILR57_015495 PF00072 Response regulator receiver domain ILR57_015495 PF00486 Transcriptional regulatory protein, C terminal ILR57_015500 PF00884 Sulfatase ILR57_015500 PF08019 Phosphoethanolamine transferase EptA/EptB ILR57_015520 PF01734 Patatin-like phospholipase ILR57_015530 PF01145 SPFH domain / Band 7 family ILR57_015535 PF04237 YjbR ILR57_015540 PF00348 Polyprenyl synthetase ILR57_015545 PF04303 PrpF protein ILR57_015550 PF00324 Amino acid permease ILR57_015585 PF01965 DJ-1/PfpI family ILR57_015590 PF00107 Zinc-binding dehydrogenase ILR57_015590 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_015595 PF06719 AraC-type transcriptional regulator N-terminus ILR57_015595 PF12833 Helix-turn-helix domain ILR57_015600 PF02673 Bacitracin resistance protein BacA ILR57_015620 PF02525 Flavodoxin-like fold ILR57_015635 PF01507 Phosphoadenosine phosphosulfate reductase family ILR57_015640 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ILR57_015640 PF06974 Protein of unknown function (DUF1298) ILR57_015650 PF10150 Ribonuclease E/G family ILR57_015650 PF00575 S1 RNA binding domain ILR57_015655 PF02545 Maf-like protein ILR57_015660 PF04093 rod shape-determining protein MreD ILR57_015665 PF04085 rod shape-determining protein MreC ILR57_015675 PF02686 Glu-tRNAGln amidotransferase C subunit ILR57_015680 PF01425 Amidase ILR57_015685 PF02637 GatB domain ILR57_015685 PF02934 GatB/GatE catalytic domain ILR57_015700 PF13610 DDE domain ILR57_015710 PF13610 DDE domain ILR57_015730 PF05992 SbmA/BacA-like family ILR57_015735 PF13291 ACT domain ILR57_015735 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_015740 PF01734 Patatin-like phospholipase ILR57_015745 PF01235 Sodium:alanine symporter family ILR57_015760 PF00881 Nitroreductase family ILR57_015765 PF07690 Major Facilitator Superfamily ILR57_015770 PF12805 FUSC-like inner membrane protein yccS ILR57_015780 PF00175 Oxidoreductase NAD-binding domain ILR57_015780 PF00258 Flavodoxin ILR57_015780 PF00667 FAD binding domain ILR57_015820 PF17969 L,D-transpeptidase C-terminal domain ILR57_015820 PF03734 L,D-transpeptidase catalytic domain ILR57_015825 PF04304 Protein of unknown function (DUF454) ILR57_015835 PF08085 Entericidin EcnA/B family ILR57_015840 PF07687 Peptidase dimerisation domain ILR57_015840 PF01546 Peptidase family M20/M25/M40 ILR57_015855 PF01584 CheW-like domain ILR57_015855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_015855 PF00072 Response regulator receiver domain ILR57_015855 PF01627 Hpt domain ILR57_015860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILR57_015860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILR57_015865 PF01584 CheW-like domain ILR57_015870 PF00072 Response regulator receiver domain ILR57_015875 PF00072 Response regulator receiver domain ILR57_015890 PF00873 AcrB/AcrD/AcrF family ILR57_015895 PF03129 Anticodon binding domain ILR57_015895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILR57_015895 PF04073 Aminoacyl-tRNA editing domain ILR57_015900 PF07411 Domain of unknown function (DUF1508) ILR57_015905 PF08274 PhnA Zinc-Ribbon ILR57_015905 PF03831 PhnA domain ILR57_015910 PF04343 Protein of unknown function, DUF488 ILR57_015920 PF01571 Aminomethyltransferase folate-binding domain ILR57_015925 PF10411 Disulfide bond isomerase protein N-terminus ILR57_015925 PF13098 Thioredoxin-like domain ILR57_015935 PF03547 Membrane transport protein ILR57_015940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_015945 PF07715 TonB-dependent Receptor Plug Domain ILR57_015945 PF00593 TonB dependent receptor ILR57_015950 PF02245 Methylpurine-DNA glycosylase (MPG) ILR57_015955 PF06827 Zinc finger found in FPG and IleRS ILR57_015955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILR57_015955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILR57_015970 PF01741 Large-conductance mechanosensitive channel, MscL ILR57_015975 PF03144 Elongation factor Tu domain 2 ILR57_015975 PF00009 Elongation factor Tu GTP binding domain ILR57_015975 PF00679 Elongation factor G C-terminus ILR57_015980 PF00860 Permease family ILR57_015985 PF05175 Methyltransferase small domain ILR57_015985 PF08468 Methyltransferase small domain N-terminal ILR57_015990 PF00324 Amino acid permease ILR57_015995 PF01139 tRNA-splicing ligase RtcB ILR57_016005 PF00691 OmpA family ILR57_016005 PF13505 Outer membrane protein beta-barrel domain ILR57_016015 PF02803 Thiolase, C-terminal domain ILR57_016015 PF00108 Thiolase, N-terminal domain ILR57_016025 PF00893 Small Multidrug Resistance protein ILR57_016035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILR57_016035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILR57_016040 PF01011 PQQ enzyme repeat ILR57_016045 PF04966 Carbohydrate-selective porin, OprB family ILR57_016050 PF02515 CoA-transferase family III ILR57_016055 PF12833 Helix-turn-helix domain ILR57_016055 PF02311 AraC-like ligand binding domain ILR57_016060 PF02803 Thiolase, C-terminal domain ILR57_016060 PF00108 Thiolase, N-terminal domain ILR57_016065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILR57_016065 PF00378 Enoyl-CoA hydratase/isomerase ILR57_016065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILR57_016090 PF03006 Haemolysin-III related ILR57_016095 PF00083 Sugar (and other) transporter ILR57_016095 PF07690 Major Facilitator Superfamily ILR57_016105 PF07516 SecA Wing and Scaffold domain ILR57_016105 PF07517 SecA DEAD-like domain ILR57_016105 PF02810 SEC-C motif ILR57_016105 PF01043 SecA preprotein cross-linking domain ILR57_016110 PF00578 AhpC/TSA family ILR57_016110 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILR57_016115 PF00753 Metallo-beta-lactamase superfamily ILR57_016130 PF02875 Mur ligase family, glutamate ligase domain ILR57_016130 PF08245 Mur ligase middle domain ILR57_016135 PF01039 Carboxyl transferase domain ILR57_016140 PF00290 Tryptophan synthase alpha chain ILR57_016165 PF00291 Pyridoxal-phosphate dependent enzyme ILR57_016170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ILR57_016175 PF07715 TonB-dependent Receptor Plug Domain ILR57_016175 PF00593 TonB dependent receptor ILR57_016180 PF01923 Cobalamin adenosyltransferase ILR57_016185 PF03009 Glycerophosphoryl diester phosphodiesterase family ILR57_016200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ILR57_016205 PF00072 Response regulator receiver domain ILR57_016205 PF00486 Transcriptional regulatory protein, C terminal ILR57_016210 PF00512 His Kinase A (phospho-acceptor) domain ILR57_016210 PF00672 HAMP domain ILR57_016210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_016220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_016220 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_016220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_016220 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR57_016225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_016225 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR57_016225 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_016225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_016230 PF06146 Phosphate-starvation-inducible E ILR57_016250 PF07715 TonB-dependent Receptor Plug Domain ILR57_016250 PF00593 TonB dependent receptor ILR57_016260 PF02938 GAD domain ILR57_016260 PF00152 tRNA synthetases class II (D, K and N) ILR57_016260 PF01336 OB-fold nucleic acid binding domain ILR57_016290 PF00534 Glycosyl transferases group 1 ILR57_016290 PF13439 Glycosyltransferase Family 4 ILR57_016295 PF00535 Glycosyl transferase family 2 ILR57_016300 PF01522 Polysaccharide deacetylase ILR57_016315 PF01063 Amino-transferase class IV ILR57_016320 PF08335 GlnD PII-uridylyltransferase ILR57_016320 PF03710 Glutamate-ammonia ligase adenylyltransferase ILR57_016325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_016325 PF00512 His Kinase A (phospho-acceptor) domain ILR57_016325 PF07689 KaiB domain ILR57_016335 PF02547 Queuosine biosynthesis protein ILR57_016350 PF01702 Queuine tRNA-ribosyltransferase ILR57_016355 PF02699 Preprotein translocase subunit ILR57_016360 PF02355 Protein export membrane protein ILR57_016360 PF07549 SecD/SecF GG Motif ILR57_016360 PF13721 SecD export protein N-terminal TM region ILR57_016365 PF02355 Protein export membrane protein ILR57_016365 PF07549 SecD/SecF GG Motif ILR57_016370 PF02441 Flavoprotein ILR57_016370 PF04127 DNA / pantothenate metabolism flavoprotein ILR57_016375 PF04002 RadC-like JAB domain ILR57_016380 PF01062 Bestrophin, RFP-TM, chloride channel ILR57_016385 PF02811 PHP domain ILR57_016390 PF04279 Intracellular septation protein A ILR57_016395 PF03795 YCII-related domain ILR57_016405 PF01266 FAD dependent oxidoreductase ILR57_016405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ILR57_016415 PF04461 Protein of unknown function (DUF520) ILR57_016425 PF03061 Thioesterase superfamily ILR57_016430 PF00085 Thioredoxin ILR57_016435 PF00561 alpha/beta hydrolase fold ILR57_016440 PF04273 Putative phosphatase (DUF442) ILR57_016440 PF00753 Metallo-beta-lactamase superfamily ILR57_016450 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_016450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILR57_016485 PF00990 Diguanylate cyclase, GGDEF domain ILR57_016485 PF17152 Periplasmic sensor domain ILR57_016490 PF01389 OmpA-like transmembrane domain ILR57_016490 PF00691 OmpA family ILR57_016495 PF00149 Calcineurin-like phosphoesterase ILR57_016495 PF10518 TAT (twin-arginine translocation) pathway signal sequence ILR57_016500 PF13091 PLD-like domain ILR57_016510 PF01926 50S ribosome-binding GTPase ILR57_016510 PF13167 GTP-binding GTPase N-terminal ILR57_016510 PF16360 GTP-binding GTPase Middle Region ILR57_016530 PF00149 Calcineurin-like phosphoesterase ILR57_016535 PF00398 Ribosomal RNA adenine dimethylase ILR57_016540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ILR57_016545 PF00572 Ribosomal protein L13 ILR57_016550 PF00380 Ribosomal protein S9/S16 ILR57_016555 PF00043 Glutathione S-transferase, C-terminal domain ILR57_016555 PF13417 Glutathione S-transferase, N-terminal domain ILR57_016560 PF04386 Stringent starvation protein B ILR57_016570 PF02785 Biotin carboxylase C-terminal domain ILR57_016570 PF00289 Biotin carboxylase, N-terminal domain ILR57_016570 PF00364 Biotin-requiring enzyme ILR57_016570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILR57_016580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_016580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_016580 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_016585 PF01039 Carboxyl transferase domain ILR57_016600 PF00440 Bacterial regulatory proteins, tetR family ILR57_016600 PF17932 Tetracyclin repressor-like, C-terminal domain ILR57_016605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_016605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_016605 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_016650 PF01066 CDP-alcohol phosphatidyltransferase ILR57_016655 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ILR57_016675 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ILR57_016675 PF00056 lactate/malate dehydrogenase, NAD binding domain ILR57_016685 PF10145 Phage-related minor tail protein ILR57_016685 PF01551 Peptidase family M23 ILR57_016685 PF01464 Transglycosylase SLT domain ILR57_016690 PF04055 Radical SAM superfamily ILR57_016690 PF01938 TRAM domain ILR57_016690 PF00919 Uncharacterized protein family UPF0004 ILR57_016695 PF02562 PhoH-like protein ILR57_016700 PF02130 Uncharacterized protein family UPF0054 ILR57_016725 PF03358 NADPH-dependent FMN reductase ILR57_016730 PF03631 Virulence factor BrkB ILR57_016735 PF00892 EamA-like transporter family ILR57_016740 PF12833 Helix-turn-helix domain ILR57_016745 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILR57_016790 PF17876 Cold shock domain ILR57_016790 PF08461 Ribonuclease R winged-helix domain ILR57_016790 PF08206 Ribonuclease B OB domain ILR57_016790 PF00773 RNB domain ILR57_016790 PF00575 S1 RNA binding domain ILR57_016795 PF01432 Peptidase family M3 ILR57_016800 PF09526 Probable metal-binding protein (DUF2387) ILR57_016830 PF03937 Flavinator of succinate dehydrogenase ILR57_016835 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_016835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_016835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_016840 PF00743 Flavin-binding monooxygenase-like ILR57_016845 PF01196 Ribosomal protein L17 ILR57_016850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ILR57_016850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ILR57_016850 PF01000 RNA polymerase Rpb3/RpoA insert domain ILR57_016855 PF01479 S4 domain ILR57_016855 PF00163 Ribosomal protein S4/S9 N-terminal domain ILR57_016860 PF00411 Ribosomal protein S11 ILR57_016865 PF00416 Ribosomal protein S13/S18 ILR57_016870 PF00444 Ribosomal protein L36 ILR57_016875 PF00344 SecY translocase ILR57_016880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ILR57_016885 PF00327 Ribosomal protein L30p/L7e ILR57_016890 PF00333 Ribosomal protein S5, N-terminal domain ILR57_016890 PF03719 Ribosomal protein S5, C-terminal domain ILR57_016895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ILR57_016900 PF00347 Ribosomal protein L6 ILR57_016905 PF00410 Ribosomal protein S8 ILR57_016910 PF00253 Ribosomal protein S14p/S29e ILR57_016915 PF00673 ribosomal L5P family C-terminus ILR57_016915 PF00281 Ribosomal protein L5 ILR57_016920 PF00467 KOW motif ILR57_016920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ILR57_016925 PF00238 Ribosomal protein L14p/L23e ILR57_016930 PF00366 Ribosomal protein S17 ILR57_016935 PF00831 Ribosomal L29 protein ILR57_016940 PF00252 Ribosomal protein L16p/L10e ILR57_016945 PF00189 Ribosomal protein S3, C-terminal domain ILR57_016945 PF07650 KH domain ILR57_016950 PF00237 Ribosomal protein L22p/L17e ILR57_016955 PF00203 Ribosomal protein S19 ILR57_016960 PF00181 Ribosomal Proteins L2, RNA binding domain ILR57_016960 PF03947 Ribosomal Proteins L2, C-terminal domain ILR57_016965 PF00276 Ribosomal protein L23 ILR57_016970 PF00573 Ribosomal protein L4/L1 family ILR57_016975 PF00297 Ribosomal protein L3 ILR57_016980 PF00338 Ribosomal protein S10p/S20e ILR57_016985 PF00117 Glutamine amidotransferase class-I ILR57_016990 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR57_016995 PF05872 Bacterial protein of unknown function (DUF853) ILR57_017000 PF00175 Oxidoreductase NAD-binding domain ILR57_017000 PF00042 Globin ILR57_017000 PF00970 Oxidoreductase FAD-binding domain ILR57_017005 PF02082 Transcriptional regulator ILR57_017010 PF01926 50S ribosome-binding GTPase ILR57_017020 PF00375 Sodium:dicarboxylate symporter family ILR57_017030 PF01553 Acyltransferase ILR57_017045 PF00270 DEAD/DEAH box helicase ILR57_017045 PF00271 Helicase conserved C-terminal domain ILR57_017045 PF17191 RecG wedge domain ILR57_017050 PF00156 Phosphoribosyl transferase domain ILR57_017055 PF00293 NUDIX domain ILR57_017060 PF03641 Possible lysine decarboxylase ILR57_017065 PF01544 CorA-like Mg2+ transporter protein ILR57_017075 PF05494 MlaC protein ILR57_017085 PF02405 Permease MlaE ILR57_017090 PF00005 ABC transporter ILR57_017100 PF03880 DbpA RNA binding domain ILR57_017100 PF00270 DEAD/DEAH box helicase ILR57_017100 PF12343 Cold shock protein DEAD box A ILR57_017100 PF00271 Helicase conserved C-terminal domain ILR57_017105 PF00459 Inositol monophosphatase family ILR57_017110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ILR57_017110 PF02779 Transketolase, pyrimidine binding domain ILR57_017110 PF02780 Transketolase, C-terminal domain ILR57_017115 PF00925 GTP cyclohydrolase II ILR57_017120 PF01218 Coproporphyrinogen III oxidase ILR57_017125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILR57_017125 PF08501 Shikimate dehydrogenase substrate binding domain ILR57_017125 PF01488 Shikimate / quinate 5-dehydrogenase ILR57_017135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILR57_017135 PF12806 Acetyl-CoA dehydrogenase C-terminal like ILR57_017135 PF02770 Acyl-CoA dehydrogenase, middle domain ILR57_017135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILR57_017145 PF04024 PspC domain ILR57_017150 PF00571 CBS domain ILR57_017175 PF02091 Glycyl-tRNA synthetase alpha subunit ILR57_017180 PF05746 DALR anticodon binding domain ILR57_017180 PF02092 Glycyl-tRNA synthetase beta subunit ILR57_017195 PF00892 EamA-like transporter family ILR57_017200 PF03466 LysR substrate binding domain ILR57_017200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_017215 PF05922 Peptidase inhibitor I9 ILR57_017215 PF00082 Subtilase family ILR57_017230 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ILR57_017235 PF04996 Succinylarginine dihydrolase ILR57_017240 PF00171 Aldehyde dehydrogenase family ILR57_017245 PF04958 Arginine N-succinyltransferase beta subunit ILR57_017250 PF00202 Aminotransferase class-III ILR57_017255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILR57_017255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILR57_017260 PF00324 Amino acid permease ILR57_017270 PF08241 Methyltransferase domain ILR57_017290 PF13614 AAA domain ILR57_017295 PF01594 AI-2E family transporter ILR57_017300 PF00080 Copper/zinc superoxide dismutase (SODC) ILR57_017305 PF12805 FUSC-like inner membrane protein yccS ILR57_017310 PF07690 Major Facilitator Superfamily ILR57_017320 PF02525 Flavodoxin-like fold ILR57_017325 PF03992 Antibiotic biosynthesis monooxygenase ILR57_017335 PF01565 FAD binding domain ILR57_017335 PF02913 FAD linked oxidases, C-terminal domain ILR57_017340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILR57_017340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILR57_017345 PF00892 EamA-like transporter family ILR57_017350 PF00892 EamA-like transporter family ILR57_017360 PF01925 Sulfite exporter TauE/SafE ILR57_017365 PF09157 Pseudouridine synthase II TruB, C-terminal ILR57_017365 PF16198 tRNA pseudouridylate synthase B C-terminal domain ILR57_017365 PF01509 TruB family pseudouridylate synthase (N terminal domain) ILR57_017370 PF03280 Proteobacterial lipase chaperone protein ILR57_017375 PF00561 alpha/beta hydrolase fold ILR57_017380 PF01245 Ribosomal protein L19 ILR57_017385 PF01746 tRNA (Guanine-1)-methyltransferase ILR57_017390 PF05239 PRC-barrel domain ILR57_017390 PF01782 RimM N-terminal domain ILR57_017395 PF00886 Ribosomal protein S16 ILR57_017440 PF02401 LytB protein ILR57_017445 PF00625 Guanylate kinase ILR57_017450 PF01192 RNA polymerase Rpb6 ILR57_017460 PF02824 TGS domain ILR57_017460 PF13291 ACT domain ILR57_017460 PF04607 Region found in RelA / SpoT proteins ILR57_017465 PF01042 Endoribonuclease L-PSP ILR57_017470 PF04324 BFD-like [2Fe-2S] binding domain ILR57_017475 PF00210 Ferritin-like domain ILR57_017480 PF15864 Protein glycosylation ligase ILR57_017480 PF04932 O-Antigen ligase ILR57_017480 PF11846 Virulence factor membrane-bound polymerase, C-terminal ILR57_017485 PF07963 Prokaryotic N-terminal methylation motif ILR57_017485 PF00114 Pilin (bacterial filament) ILR57_017495 PF04536 TPM domain ILR57_017500 PF04011 LemA family ILR57_017510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILR57_017510 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILR57_017515 PF04898 Glutamate synthase central domain ILR57_017515 PF01645 Conserved region in glutamate synthase ILR57_017515 PF01493 GXGXG motif ILR57_017515 PF00310 Glutamine amidotransferases class-II ILR57_017525 PF01761 3-dehydroquinate synthase ILR57_017530 PF01202 Shikimate kinase ILR57_017535 PF11741 AMIN domain ILR57_017535 PF00263 Bacterial type II and III secretion system protein ILR57_017535 PF03958 Bacterial type II/III secretion system short domain ILR57_017535 PF07660 Secretin and TonB N terminus short domain ILR57_017545 PF04350 Pilus assembly protein, PilO ILR57_017550 PF05137 Fimbrial assembly protein (PilN) ILR57_017555 PF11104 Type IV pilus assembly protein PilM; ILR57_017560 PF17092 Penicillin-binding protein OB-like domain ILR57_017560 PF00912 Transglycosylase ILR57_017560 PF00905 Penicillin binding protein transpeptidase domain ILR57_017565 PF13847 Methyltransferase domain ILR57_017575 PF00953 Glycosyl transferase family 4 ILR57_017580 PF01225 Mur ligase family, catalytic domain ILR57_017580 PF02875 Mur ligase family, glutamate ligase domain ILR57_017580 PF08245 Mur ligase middle domain ILR57_017585 PF01225 Mur ligase family, catalytic domain ILR57_017585 PF02875 Mur ligase family, glutamate ligase domain ILR57_017585 PF08245 Mur ligase middle domain ILR57_017590 PF03717 Penicillin-binding Protein dimerisation domain ILR57_017590 PF00905 Penicillin binding protein transpeptidase domain ILR57_017600 PF01795 MraW methylase family ILR57_017615 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILR57_017630 PF00324 Amino acid permease ILR57_017660 PF01545 Cation efflux family ILR57_017665 PF00873 AcrB/AcrD/AcrF family ILR57_017670 PF00529 HlyD membrane-fusion protein of T1SS ILR57_017670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_017695 PF00005 ABC transporter ILR57_017695 PF12848 ABC transporter ILR57_017700 PF01053 Cys/Met metabolism PLP-dependent enzyme ILR57_017705 PF00106 short chain dehydrogenase ILR57_017710 PF01740 STAS domain ILR57_017710 PF00916 Sulfate permease family ILR57_017715 PF17674 HHH domain ILR57_017715 PF00575 S1 RNA binding domain ILR57_017715 PF09371 Tex-like protein N-terminal domain ILR57_017715 PF16921 Tex protein YqgF-like domain ILR57_017720 PF00486 Transcriptional regulatory protein, C terminal ILR57_017720 PF00072 Response regulator receiver domain ILR57_017725 PF00672 HAMP domain ILR57_017725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_017725 PF00512 His Kinase A (phospho-acceptor) domain ILR57_017735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ILR57_017735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ILR57_017740 PF00583 Acetyltransferase (GNAT) family ILR57_017760 PF00475 Imidazoleglycerol-phosphate dehydratase ILR57_017765 PF00117 Glutamine amidotransferase class-I ILR57_017780 PF00977 Histidine biosynthesis protein ILR57_017785 PF00664 ABC transporter transmembrane region ILR57_017785 PF00005 ABC transporter ILR57_017800 PF03992 Antibiotic biosynthesis monooxygenase ILR57_017815 PF01636 Phosphotransferase enzyme family ILR57_017820 PF00977 Histidine biosynthesis protein ILR57_017835 PF00230 Major intrinsic protein ILR57_017860 PF02705 K+ potassium transporter ILR57_017880 PF00809 Pterin binding enzyme ILR57_017885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR57_017885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR57_017885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR57_017885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR57_017895 PF13610 DDE domain ILR57_017900 PF01636 Phosphotransferase enzyme family ILR57_017915 PF13610 DDE domain ILR57_017920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ILR57_017920 PF13542 Helix-turn-helix domain of transposase family ISL3 ILR57_017920 PF01610 Transposase ILR57_017925 PF07690 Major Facilitator Superfamily ILR57_017935 PF03389 MobA/MobL family ILR57_017935 PF01443 Viral (Superfamily 1) RNA helicase ILR57_017935 PF17841 BID domain of Bartonella effector protein (Bep) ILR57_017955 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ILR57_017960 PF01636 Phosphotransferase enzyme family ILR57_017975 PF02525 Flavodoxin-like fold ILR57_017980 PF01638 HxlR-like helix-turn-helix ILR57_018010 PF02311 AraC-like ligand binding domain ILR57_018010 PF12833 Helix-turn-helix domain ILR57_018015 PF00248 Aldo/keto reductase family ILR57_018035 PF03466 LysR substrate binding domain ILR57_018035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_018040 PF07690 Major Facilitator Superfamily ILR57_018050 PF00324 Amino acid permease ILR57_018055 PF00171 Aldehyde dehydrogenase family ILR57_018070 PF06018 CodY GAF-like domain ILR57_018070 PF17853 GGDEF-like domain ILR57_018070 PF13556 PucR C-terminal helix-turn-helix domain ILR57_018075 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ILR57_018075 PF12833 Helix-turn-helix domain ILR57_018090 PF01593 Flavin containing amine oxidoreductase ILR57_018095 PF02678 Pirin ILR57_018095 PF05726 Pirin C-terminal cupin domain ILR57_018100 PF00857 Isochorismatase family ILR57_018105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_018110 PF00171 Aldehyde dehydrogenase family ILR57_018115 PF00202 Aminotransferase class-III ILR57_018120 PF00155 Aminotransferase class I and II ILR57_018120 PF00392 Bacterial regulatory proteins, gntR family ILR57_018125 PF00324 Amino acid permease ILR57_018135 PF03591 AzlC protein ILR57_018160 PF00664 ABC transporter transmembrane region ILR57_018160 PF03412 Peptidase C39 family ILR57_018160 PF00005 ABC transporter ILR57_018165 PF13533 Biotin-lipoyl like ILR57_018170 PF00436 Single-strand binding protein family ILR57_018175 PF07690 Major Facilitator Superfamily ILR57_018185 PF08543 Phosphomethylpyrimidine kinase ILR57_018185 PF03070 TENA/THI-4/PQQC family ILR57_018185 PF02581 Thiamine monophosphate synthase ILR57_018190 PF06942 GlpM protein ILR57_018200 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_018200 PF00107 Zinc-binding dehydrogenase ILR57_018205 PF16925 Tetracyclin repressor-like, C-terminal domain ILR57_018205 PF00440 Bacterial regulatory proteins, tetR family ILR57_018210 PF00005 ABC transporter ILR57_018210 PF17760 UvrA interaction domain ILR57_018210 PF17755 UvrA DNA-binding domain ILR57_018220 PF00990 Diguanylate cyclase, GGDEF domain ILR57_018230 PF02028 BCCT, betaine/carnitine/choline family transporter ILR57_018240 PF00474 Sodium:solute symporter family ILR57_018245 PF04341 Protein of unknown function, DUF485 ILR57_018250 PF00672 HAMP domain ILR57_018250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_018250 PF00512 His Kinase A (phospho-acceptor) domain ILR57_018250 PF00072 Response regulator receiver domain ILR57_018250 PF01627 Hpt domain ILR57_018260 PF00072 Response regulator receiver domain ILR57_018260 PF00196 Bacterial regulatory proteins, luxR family ILR57_018265 PF03358 NADPH-dependent FMN reductase ILR57_018270 PF00296 Luciferase-like monooxygenase ILR57_018275 PF01037 Lrp/AsnC ligand binding domain ILR57_018280 PF00857 Isochorismatase family ILR57_018285 PF16177 Acetyl-coenzyme A synthetase N-terminus ILR57_018285 PF00501 AMP-binding enzyme ILR57_018285 PF13193 AMP-binding enzyme C-terminal domain ILR57_018295 PF00924 Mechanosensitive ion channel ILR57_018300 PF04452 RNA methyltransferase ILR57_018305 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ILR57_018310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILR57_018335 PF01368 DHH family ILR57_018335 PF02272 DHHA1 domain ILR57_018335 PF17768 RecJ OB domain ILR57_018340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ILR57_018340 PF01243 Pyridoxamine 5'-phosphate oxidase ILR57_018345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILR57_018345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILR57_018345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILR57_018345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILR57_018350 PF00571 CBS domain ILR57_018350 PF00478 IMP dehydrogenase / GMP reductase domain ILR57_018355 PF03692 Putative zinc- or iron-chelating domain ILR57_018360 PF01613 Flavin reductase like domain ILR57_018360 PF00258 Flavodoxin ILR57_018365 PF07715 TonB-dependent Receptor Plug Domain ILR57_018365 PF00593 TonB dependent receptor ILR57_018370 PF01169 Uncharacterized protein family UPF0016 ILR57_018380 PF00364 Biotin-requiring enzyme ILR57_018380 PF02817 e3 binding domain ILR57_018380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILR57_018385 PF17831 Pyruvate dehydrogenase E1 component middle domain ILR57_018385 PF00456 Transketolase, thiamine diphosphate binding domain ILR57_018390 PF01551 Peptidase family M23 ILR57_018400 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ILR57_018405 PF12327 FtsZ family, C-terminal domain ILR57_018405 PF00091 Tubulin/FtsZ family, GTPase domain ILR57_018410 PF02491 SHS2 domain inserted in FTSA ILR57_018415 PF03799 Cell division protein FtsQ ILR57_018415 PF08478 POTRA domain, FtsQ-type ILR57_018420 PF07478 D-ala D-ala ligase C-terminus ILR57_018420 PF01820 D-ala D-ala ligase N-terminus ILR57_018425 PF01225 Mur ligase family, catalytic domain ILR57_018425 PF02875 Mur ligase family, glutamate ligase domain ILR57_018425 PF08245 Mur ligase middle domain ILR57_018430 PF04101 Glycosyltransferase family 28 C-terminal domain ILR57_018430 PF03033 Glycosyltransferase family 28 N-terminal domain ILR57_018435 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ILR57_018435 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ILR57_018445 PF07715 TonB-dependent Receptor Plug Domain ILR57_018445 PF00593 TonB dependent receptor ILR57_018450 PF00156 Phosphoribosyl transferase domain ILR57_018455 PF03372 Endonuclease/Exonuclease/phosphatase family ILR57_018460 PF03960 ArsC family ILR57_018470 PF07859 alpha/beta hydrolase fold ILR57_018475 PF00990 Diguanylate cyclase, GGDEF domain ILR57_018475 PF07694 5TMR of 5TMR-LYT ILR57_018480 PF02683 Cytochrome C biogenesis protein transmembrane region ILR57_018480 PF11412 Disulphide bond corrector protein DsbC ILR57_018510 PF00576 HIUase/Transthyretin family ILR57_018515 PF00860 Permease family ILR57_018525 PF01494 FAD binding domain ILR57_018530 PF03561 Allantoicase repeat ILR57_018535 PF04115 Ureidoglycolate lyase ILR57_018540 PF01751 Toprim domain ILR57_018540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_018540 PF00986 DNA gyrase B subunit, carboxyl terminus ILR57_018540 PF00204 DNA gyrase B ILR57_018545 PF05728 Uncharacterised protein family (UPF0227) ILR57_018565 PF02600 Disulfide bond formation protein DsbB ILR57_018570 PF04262 Glutamate-cysteine ligase ILR57_018585 PF04286 Protein of unknown function (DUF445) ILR57_018590 PF00155 Aminotransferase class I and II ILR57_018595 PF01554 MatE ILR57_018600 PF00106 short chain dehydrogenase ILR57_018610 PF00072 Response regulator receiver domain ILR57_018610 PF00486 Transcriptional regulatory protein, C terminal ILR57_018615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILR57_018615 PF00512 His Kinase A (phospho-acceptor) domain ILR57_018615 PF00989 PAS fold ILR57_018615 PF11808 Phosphate regulon sensor protein PhoR ILR57_018625 PF02666 Phosphatidylserine decarboxylase ILR57_018630 PF00581 Rhodanese-like domain ILR57_018635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILR57_018635 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ILR57_018640 PF02580 D-Tyr-tRNA(Tyr) deacylase ILR57_018665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILR57_018665 PF00925 GTP cyclohydrolase II ILR57_018670 PF00885 6,7-dimethyl-8-ribityllumazine synthase ILR57_018675 PF01029 NusB family ILR57_018680 PF02769 AIR synthase related protein, C-terminal domain ILR57_018680 PF00586 AIR synthase related protein, N-terminal domain ILR57_018685 PF04608 Phosphatidylglycerophosphatase A ILR57_018690 PF12804 MobA-like NTP transferase domain ILR57_018690 PF14602 Hexapeptide repeat of succinyl-transferase ILR57_018690 PF00132 Bacterial transferase hexapeptide (six repeats) ILR57_018695 PF01380 SIS domain ILR57_018700 PF01494 FAD binding domain ILR57_018720 PF01810 LysE type translocator ILR57_018725 PF01177 Asp/Glu/Hydantoin racemase ILR57_018740 PF00491 Arginase family ILR57_018745 PF01979 Amidohydrolase family ILR57_018750 PF00324 Amino acid permease ILR57_018755 PF00221 Aromatic amino acid lyase ILR57_018760 PF01175 Urocanase Rossmann-like domain ILR57_018760 PF17392 Urocanase C-terminal domain ILR57_018760 PF17391 Urocanase N-terminal domain ILR57_018765 PF05962 HutD ILR57_018770 PF00392 Bacterial regulatory proteins, gntR family ILR57_018770 PF07702 UTRA domain ILR57_018780 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILR57_018780 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILR57_018790 PF00324 Amino acid permease ILR57_018800 PF14497 Glutathione S-transferase, C-terminal domain ILR57_018800 PF02798 Glutathione S-transferase, N-terminal domain ILR57_018805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR57_018815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILR57_018820 PF04463 Protein of unknown function (DUF523) ILR57_018825 PF01554 MatE ILR57_018830 PF01758 Sodium Bile acid symporter family ILR57_018835 PF00857 Isochorismatase family ILR57_018840 PF00701 Dihydrodipicolinate synthetase family ILR57_018850 PF01259 SAICAR synthetase ILR57_018860 PF01226 Formate/nitrite transporter ILR57_018865 PF00004 ATPase family associated with various cellular activities (AAA) ILR57_018865 PF16193 AAA C-terminal domain ILR57_018865 PF12002 MgsA AAA+ ATPase C terminal ILR57_018880 PF13954 PapC N-terminal domain ILR57_018880 PF00577 Outer membrane usher protein ILR57_018880 PF13953 PapC C-terminal domain ILR57_018885 PF13953 PapC C-terminal domain ILR57_018885 PF13954 PapC N-terminal domain ILR57_018885 PF00577 Outer membrane usher protein ILR57_018890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILR57_018890 PF02753 Pili assembly chaperone PapD, C-terminal domain ILR57_018895 PF00419 Fimbrial protein ILR57_018900 PF03692 Putative zinc- or iron-chelating domain ILR57_018905 PF07043 Protein of unknown function (DUF1328) ILR57_018920 PF00730 HhH-GPD superfamily base excision DNA repair protein ILR57_018920 PF14815 NUDIX domain ILR57_018920 PF00633 Helix-hairpin-helix motif ILR57_018920 PF10576 Iron-sulfur binding domain of endonuclease III ILR57_018935 PF03352 Methyladenine glycosylase ILR57_018940 PF08240 Alcohol dehydrogenase GroES-like domain ILR57_018940 PF00107 Zinc-binding dehydrogenase ILR57_018945 PF00392 Bacterial regulatory proteins, gntR family ILR57_018945 PF00155 Aminotransferase class I and II ILR57_018960 PF03466 LysR substrate binding domain ILR57_018960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_018965 PF00248 Aldo/keto reductase family ILR57_018970 PF07690 Major Facilitator Superfamily ILR57_018980 PF05173 Dihydrodipicolinate reductase, C-terminus ILR57_018980 PF01113 Dihydrodipicolinate reductase, N-terminus ILR57_018990 PF00684 DnaJ central domain ILR57_018990 PF01556 DnaJ C terminal domain ILR57_018990 PF00226 DnaJ domain ILR57_019000 PF00873 AcrB/AcrD/AcrF family ILR57_019005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILR57_019010 PF00440 Bacterial regulatory proteins, tetR family ILR57_019010 PF08361 MAATS-type transcriptional repressor, C-terminal region ILR57_019015 PF00311 Phosphoenolpyruvate carboxylase ILR57_019020 PF00860 Permease family ILR57_019025 PF03466 LysR substrate binding domain ILR57_019025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILR57_019040 PF00920 Dehydratase family ILR57_019045 PF00551 Formyl transferase ILR57_019045 PF02911 Formyl transferase, C-terminal domain ILR57_019050 PF01029 NusB family ILR57_019050 PF01189 16S rRNA methyltransferase RsmB/F ILR57_019060 PF00209 Sodium:neurotransmitter symporter family ILR57_019100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILR57_019105 PF07859 alpha/beta hydrolase fold ILR57_019130 PF01025 GrpE ILR57_019135 PF00012 Hsp70 protein ILR57_019155 PF13406 Transglycosylase SLT domain ILR57_019160 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ILR57_019160 PF02222 ATP-grasp domain ILR57_019165 PF00731 AIR carboxylase ILR57_019175 PF02875 Mur ligase family, glutamate ligase domain ILR57_019175 PF01225 Mur ligase family, catalytic domain ILR57_019175 PF08245 Mur ligase middle domain ILR57_019185 PF01569 PAP2 superfamily ILR57_019190 PF03741 Integral membrane protein TerC family ILR57_019200 PF03738 Glutathionylspermidine synthase preATP-grasp ILR57_019205 PF00355 Rieske [2Fe-2S] domain ILR57_019210 PF01979 Amidohydrolase family ILR57_019215 PF00156 Phosphoribosyl transferase domain ILR57_019225 PF13098 Thioredoxin-like domain ILR57_019225 PF10411 Disulfide bond isomerase protein N-terminus ILR57_019230 PF01545 Cation efflux family ILR57_019230 PF16916 Dimerisation domain of Zinc Transporter ILR57_019235 PF02583 Metal-sensitive transcriptional repressor ILR57_019240 PF01926 50S ribosome-binding GTPase ILR57_019240 PF12631 MnmE helical domain ILR57_019240 PF10396 GTP-binding protein TrmE N-terminus ILR57_019245 PF02096 60Kd inner membrane protein ILR57_019245 PF14849 YidC periplasmic domain ILR57_019250 PF01809 Putative membrane protein insertion efficiency factor ILR57_019255 PF00825 Ribonuclease P ILR57_019260 PF00468 Ribosomal protein L34 ILR57_019280 PF00905 Penicillin binding protein transpeptidase domain ILR57_019285 PF05973 Phage derived protein Gp49-like (DUF891) ILR57_019305 PF00593 TonB dependent receptor ILR57_019305 PF07715 TonB-dependent Receptor Plug Domain ILR57_019320 PF00905 Penicillin binding protein transpeptidase domain