locus-tag class description C7R87_0010 PF00593 TonB dependent receptor C7R87_0010 PF07715 TonB-dependent Receptor Plug Domain C7R87_0011 PF00072 Response regulator receiver domain C7R87_0011 PF01627 Hpt domain C7R87_0011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_0011 PF01584 CheW-like domain C7R87_0013 PF01546 Peptidase family M20/M25/M40 C7R87_0013 PF07687 Peptidase dimerisation domain C7R87_0014 PF08085 Entericidin EcnA/B family C7R87_0016 PF04304 Protein of unknown function (DUF454) C7R87_0017 PF17969 L,D-transpeptidase C-terminal domain C7R87_0017 PF03734 L,D-transpeptidase catalytic domain C7R87_0025 PF00667 FAD binding domain C7R87_0025 PF00258 Flavodoxin C7R87_0025 PF00175 Oxidoreductase NAD-binding domain C7R87_0027 PF12805 FUSC-like inner membrane protein yccS C7R87_0028 PF07690 Major Facilitator Superfamily C7R87_0029 PF00881 Nitroreductase family C7R87_0032 PF01235 Sodium:alanine symporter family C7R87_0033 PF01734 Patatin-like phospholipase C7R87_0034 PF13291 ACT domain C7R87_0034 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_0035 PF05992 SbmA/BacA-like family C7R87_0041 PF02934 GatB/GatE catalytic domain C7R87_0041 PF02637 GatB domain C7R87_0042 PF01425 Amidase C7R87_0043 PF02686 Glu-tRNAGln amidotransferase C subunit C7R87_0045 PF04085 rod shape-determining protein MreC C7R87_0047 PF02545 Maf-like protein C7R87_0048 PF10150 Ribonuclease E/G family C7R87_0048 PF00575 S1 RNA binding domain C7R87_0050 PF06974 Protein of unknown function (DUF1298) C7R87_0050 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C7R87_0051 PF01507 Phosphoadenosine phosphosulfate reductase family C7R87_0054 PF02525 Flavodoxin-like fold C7R87_0058 PF02673 Bacitracin resistance protein BacA C7R87_0059 PF06719 AraC-type transcriptional regulator N-terminus C7R87_0059 PF12833 Helix-turn-helix domain C7R87_0060 PF00550 Phosphopantetheine attachment site C7R87_0060 PF09277 Erythronolide synthase, docking C7R87_0060 PF08990 Erythronolide synthase docking C7R87_0060 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_0060 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_0060 PF16197 Ketoacyl-synthetase C-terminal extension C7R87_0060 PF00698 Acyl transferase domain C7R87_0060 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_0060 PF08659 KR domain C7R87_0060 PF14765 Polyketide synthase dehydratase C7R87_0061 PF01965 DJ-1/PfpI family C7R87_0137 PF13356 Arm DNA-binding domain C7R87_0137 PF00589 Phage integrase family C7R87_0139 PF00324 Amino acid permease C7R87_0141 PF04303 PrpF protein C7R87_0142 PF00348 Polyprenyl synthetase C7R87_0143 PF04237 YjbR C7R87_0144 PF01145 SPFH domain / Band 7 family C7R87_0146 PF01734 Patatin-like phospholipase C7R87_0150 PF08019 Phosphoethanolamine transferase EptA/EptB C7R87_0150 PF00884 Sulfatase C7R87_0151 PF00072 Response regulator receiver domain C7R87_0151 PF00486 Transcriptional regulatory protein, C terminal C7R87_0152 PF08521 Two-component sensor kinase N-terminal C7R87_0152 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_0152 PF00512 His Kinase A (phospho-acceptor) domain C7R87_0154 PF00909 Ammonium Transporter Family C7R87_0156 PF03466 LysR substrate binding domain C7R87_0156 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0160 PF10458 Valyl tRNA synthetase tRNA binding arm C7R87_0160 PF08264 Anticodon-binding domain of tRNA C7R87_0160 PF00133 tRNA synthetases class I (I, L, M and V) C7R87_0164 PF01906 Putative heavy-metal-binding C7R87_0165 PF01906 Putative heavy-metal-binding C7R87_0166 PF02321 Outer membrane efflux protein C7R87_0167 PF00873 AcrB/AcrD/AcrF family C7R87_0168 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_0168 PF00529 HlyD membrane-fusion protein of T1SS C7R87_0169 PF01569 PAP2 superfamily C7R87_0171 PF00348 Polyprenyl synthetase C7R87_0172 PF00829 Ribosomal prokaryotic L21 protein C7R87_0173 PF01016 Ribosomal L27 protein C7R87_0174 PF03548 Outer membrane lipoprotein carrier protein LolA C7R87_0176 PF02403 Seryl-tRNA synthetase N-terminal domain C7R87_0176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7R87_0177 PF14824 Sirohaem biosynthesis protein central C7R87_0177 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7R87_0177 PF10414 Sirohaem synthase dimerisation region C7R87_0178 PF00588 SpoU rRNA Methylase family C7R87_0179 PF01638 HxlR-like helix-turn-helix C7R87_0180 PF03358 NADPH-dependent FMN reductase C7R87_0181 PF13520 Amino acid permease C7R87_0182 PF00465 Iron-containing alcohol dehydrogenase C7R87_0184 PF03099 Biotin/lipoate A/B protein ligase family C7R87_0185 PF04359 Protein of unknown function (DUF493) C7R87_0186 PF04545 Sigma-70, region 4 C7R87_0186 PF04542 Sigma-70 region 2 C7R87_0186 PF00140 Sigma-70 factor, region 1.2 C7R87_0186 PF03979 Sigma-70 factor, region 1.1 C7R87_0186 PF04546 Sigma-70, non-essential region C7R87_0186 PF04539 Sigma-70 region 3 C7R87_0192 PF00285 Citrate synthase, C-terminal domain C7R87_0193 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C7R87_0194 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C7R87_0195 PF00890 FAD binding domain C7R87_0195 PF02910 Fumarate reductase flavoprotein C-term C7R87_0196 PF13085 2Fe-2S iron-sulfur cluster binding domain C7R87_0198 PF02779 Transketolase, pyrimidine binding domain C7R87_0198 PF16870 2-oxoglutarate dehydrogenase C-terminal C7R87_0198 PF00676 Dehydrogenase E1 component C7R87_0198 PF16078 2-oxoglutarate dehydrogenase N-terminus C7R87_0199 PF02817 e3 binding domain C7R87_0199 PF00364 Biotin-requiring enzyme C7R87_0199 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7R87_0200 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7R87_0201 PF00549 CoA-ligase C7R87_0201 PF08442 ATP-grasp domain C7R87_0202 PF02629 CoA binding domain C7R87_0202 PF00549 CoA-ligase C7R87_0203 PF00579 tRNA synthetases class I (W and Y) C7R87_0204 PF05661 Protein of unknown function (DUF808) C7R87_0205 PF04228 Putative neutral zinc metallopeptidase C7R87_0206 PF00999 Sodium/hydrogen exchanger family C7R87_0209 PF09587 Bacterial capsule synthesis protein PGA_cap C7R87_0211 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7R87_0212 PF00582 Universal stress protein family C7R87_0213 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_0214 PF01272 Transcription elongation factor, GreA/GreB, C-term C7R87_0214 PF03449 Transcription elongation factor, N-terminal C7R87_0215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_0215 PF02142 MGS-like domain C7R87_0215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C7R87_0216 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C7R87_0216 PF00117 Glutamine amidotransferase class-I C7R87_0219 PF01985 CRS1 / YhbY (CRM) domain C7R87_0220 PF01728 FtsJ-like methyltransferase C7R87_0221 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_0221 PF06480 FtsH Extracellular C7R87_0221 PF01434 Peptidase family M41 C7R87_0221 PF17862 AAA+ lid domain C7R87_0222 PF00809 Pterin binding enzyme C7R87_0226 PF09423 PhoD-like phosphatase C7R87_0226 PF16655 PhoD-like phosphatase, N-terminal domain C7R87_0229 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C7R87_0229 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C7R87_0232 PF00083 Sugar (and other) transporter C7R87_0233 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7R87_0233 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7R87_0234 PF01266 FAD dependent oxidoreductase C7R87_0234 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C7R87_0235 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C7R87_0235 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C7R87_0236 PF00781 Diacylglycerol kinase catalytic domain C7R87_0237 PF00149 Calcineurin-like phosphoesterase C7R87_0240 PF00166 Chaperonin 10 Kd subunit C7R87_0241 PF00118 TCP-1/cpn60 chaperonin family C7R87_0242 PF01219 Prokaryotic diacylglycerol kinase C7R87_0243 PF00753 Metallo-beta-lactamase superfamily C7R87_0244 PF03009 Glycerophosphoryl diester phosphodiesterase family C7R87_0245 PF00873 AcrB/AcrD/AcrF family C7R87_0247 PF01435 Peptidase family M48 C7R87_0248 PF01464 Transglycosylase SLT domain C7R87_0249 PF01171 PP-loop family C7R87_0251 PF01464 Transglycosylase SLT domain C7R87_0251 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7R87_0252 PF01272 Transcription elongation factor, GreA/GreB, C-term C7R87_0252 PF03449 Transcription elongation factor, N-terminal C7R87_0255 PF00550 Phosphopantetheine attachment site C7R87_0255 PF00501 AMP-binding enzyme C7R87_0255 PF13193 AMP-binding enzyme C-terminal domain C7R87_0255 PF00975 Thioesterase domain C7R87_0255 PF00668 Condensation domain C7R87_0260 PF00881 Nitroreductase family C7R87_0263 PF02595 Glycerate kinase family C7R87_0264 PF00384 Molybdopterin oxidoreductase C7R87_0265 PF02634 FdhD/NarQ family C7R87_0266 PF06803 Protein of unknown function (DUF1232) C7R87_0267 PF11890 Domain of unknown function (DUF3410) C7R87_0267 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7R87_0267 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7R87_0268 PF00152 tRNA synthetases class II (D, K and N) C7R87_0270 PF18073 Rubredoxin metal binding domain C7R87_0272 PF00324 Amino acid permease C7R87_0274 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C7R87_0274 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C7R87_0275 PF01678 Diaminopimelate epimerase C7R87_0276 PF01810 LysE type translocator C7R87_0277 PF00589 Phage integrase family C7R87_0277 PF02899 Phage integrase, N-terminal SAM-like domain C7R87_0278 PF01012 Electron transfer flavoprotein domain C7R87_0279 PF00766 Electron transfer flavoprotein FAD-binding domain C7R87_0279 PF01012 Electron transfer flavoprotein domain C7R87_0280 PF00521 DNA gyrase/topoisomerase IV, subunit A C7R87_0280 PF03989 DNA gyrase C-terminal domain, beta-propeller C7R87_0283 PF00535 Glycosyl transferase family 2 C7R87_0287 PF13533 Biotin-lipoyl like C7R87_0290 PF00266 Aminotransferase class-V C7R87_0292 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C7R87_0294 PF02687 FtsX-like permease family C7R87_0294 PF12704 MacB-like periplasmic core domain C7R87_0295 PF00005 ABC transporter C7R87_0296 PF00753 Metallo-beta-lactamase superfamily C7R87_0296 PF13567 Domain of unknown function (DUF4131) C7R87_0296 PF03772 Competence protein C7R87_0298 PF01343 Peptidase family S49 C7R87_0298 PF06965 Na+/H+ antiporter 1 C7R87_0299 PF12697 Alpha/beta hydrolase family C7R87_0300 PF00551 Formyl transferase C7R87_0301 PF02769 AIR synthase related protein, C-terminal domain C7R87_0301 PF00586 AIR synthase related protein, N-terminal domain C7R87_0302 PF01594 AI-2E family transporter C7R87_0303 PF08299 Bacterial dnaA protein helix-turn-helix C7R87_0303 PF11638 DnaA N-terminal domain C7R87_0303 PF00308 Bacterial dnaA protein C7R87_0312 PF00588 SpoU rRNA Methylase family C7R87_0312 PF08032 RNA 2'-O ribose methyltransferase substrate binding C7R87_0313 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C7R87_0315 PF00691 OmpA family C7R87_0316 PF07676 WD40-like Beta Propeller Repeat C7R87_0316 PF04052 TolB amino-terminal domain C7R87_0318 PF02472 Biopolymer transport protein ExbD/TolR C7R87_0319 PF01618 MotA/TolQ/ExbB proton channel family C7R87_0320 PF03061 Thioesterase superfamily C7R87_0321 PF07687 Peptidase dimerisation domain C7R87_0321 PF01546 Peptidase family M20/M25/M40 C7R87_0322 PF17864 RuvB AAA lid domain C7R87_0322 PF05491 RuvB C-terminal winged helix domain C7R87_0322 PF05496 Holliday junction DNA helicase RuvB P-loop domain C7R87_0323 PF07499 RuvA, C-terminal domain C7R87_0323 PF01330 RuvA N terminal domain C7R87_0324 PF01966 HD domain C7R87_0325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C7R87_0325 PF02769 AIR synthase related protein, C-terminal domain C7R87_0325 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C7R87_0326 PF07690 Major Facilitator Superfamily C7R87_0329 PF01784 NIF3 (NGG1p interacting factor 3) C7R87_0330 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0331 PF00293 NUDIX domain C7R87_0331 PF01467 Cytidylyltransferase-like C7R87_0333 PF00578 AhpC/TSA family C7R87_0336 PF06508 Queuosine biosynthesis protein QueC C7R87_0338 PF14602 Hexapeptide repeat of succinyl-transferase C7R87_0338 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C7R87_0338 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_0340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0340 PF03466 LysR substrate binding domain C7R87_0341 PF12857 TOBE-like domain C7R87_0341 PF00005 ABC transporter C7R87_0342 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0343 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0347 PF01063 Amino-transferase class IV C7R87_0348 PF02618 YceG-like family C7R87_0349 PF02223 Thymidylate kinase C7R87_0351 PF00890 FAD binding domain C7R87_0351 PF02910 Fumarate reductase flavoprotein C-term C7R87_0352 PF13180 PDZ domain C7R87_0354 PF00679 Elongation factor G C-terminus C7R87_0354 PF00009 Elongation factor Tu GTP binding domain C7R87_0354 PF03144 Elongation factor Tu domain 2 C7R87_0354 PF06421 GTP-binding protein LepA C-terminus C7R87_0355 PF10502 Signal peptidase, peptidase S26 C7R87_0357 PF14622 Ribonuclease-III-like C7R87_0357 PF00035 Double-stranded RNA binding motif C7R87_0358 PF01926 50S ribosome-binding GTPase C7R87_0358 PF07650 KH domain C7R87_0360 PF11967 Recombination protein O N terminal C7R87_0360 PF02565 Recombination protein O C terminal C7R87_0361 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C7R87_0362 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C7R87_0363 PF00106 short chain dehydrogenase C7R87_0366 PF00106 short chain dehydrogenase C7R87_0373 PF00990 Diguanylate cyclase, GGDEF domain C7R87_0373 PF17151 Periplasmic sensor domain C7R87_0375 PF12344 Ultra-violet resistance protein B C7R87_0375 PF00271 Helicase conserved C-terminal domain C7R87_0375 PF17757 UvrB interaction domain C7R87_0375 PF02151 UvrB/uvrC motif C7R87_0375 PF04851 Type III restriction enzyme, res subunit C7R87_0377 PF00892 EamA-like transporter family C7R87_0378 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7R87_0378 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7R87_0382 PF01018 GTP1/OBG C7R87_0382 PF01926 50S ribosome-binding GTPase C7R87_0383 PF00696 Amino acid kinase family C7R87_0383 PF01472 PUA domain C7R87_0385 PF07759 Protein of unknown function (DUF1615) C7R87_0386 PF01207 Dihydrouridine synthase (Dus) C7R87_0387 PF03060 Nitronate monooxygenase C7R87_0390 PF02350 UDP-N-acetylglucosamine 2-epimerase C7R87_0396 PF03441 FAD binding domain of DNA photolyase C7R87_0396 PF00875 DNA photolyase C7R87_0397 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_0398 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0399 PF07943 Penicillin-binding protein 5, C-terminal domain C7R87_0399 PF00768 D-alanyl-D-alanine carboxypeptidase C7R87_0401 PF03971 Monomeric isocitrate dehydrogenase C7R87_0402 PF00849 RNA pseudouridylate synthase C7R87_0404 PF00180 Isocitrate/isopropylmalate dehydrogenase C7R87_0407 PF06779 Uncharacterised MFS-type transporter YbfB C7R87_0408 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0408 PF03466 LysR substrate binding domain C7R87_0410 PF02567 Phenazine biosynthesis-like protein C7R87_0411 PF00675 Insulinase (Peptidase family M16) C7R87_0411 PF05193 Peptidase M16 inactive domain C7R87_0416 PF02581 Thiamine monophosphate synthase C7R87_0417 PF00202 Aminotransferase class-III C7R87_0419 PF00849 RNA pseudouridylate synthase C7R87_0420 PF00176 SNF2 family N-terminal domain C7R87_0420 PF12137 RNA polymerase recycling family C-terminal C7R87_0420 PF18337 RapA N-terminal Tudor like domain C7R87_0420 PF00271 Helicase conserved C-terminal domain C7R87_0420 PF18339 RapA N-terminal Tudor like domain 1 C7R87_0422 PF00440 Bacterial regulatory proteins, tetR family C7R87_0423 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_0423 PF00175 Oxidoreductase NAD-binding domain C7R87_0423 PF00970 Oxidoreductase FAD-binding domain C7R87_0424 PF00487 Fatty acid desaturase C7R87_0426 PF00440 Bacterial regulatory proteins, tetR family C7R87_0426 PF17754 MftR C-terminal domain C7R87_0428 PF00202 Aminotransferase class-III C7R87_0429 PF00282 Pyridoxal-dependent decarboxylase conserved domain C7R87_0430 PF00171 Aldehyde dehydrogenase family C7R87_0431 PF01037 Lrp/AsnC ligand binding domain C7R87_0432 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7R87_0432 PF00205 Thiamine pyrophosphate enzyme, central domain C7R87_0432 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7R87_0433 PF00324 Amino acid permease C7R87_0434 PF12849 PBP superfamily domain C7R87_0435 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0436 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0437 PF00005 ABC transporter C7R87_0438 PF01343 Peptidase family S49 C7R87_0438 PF08496 Peptidase family S49 N-terminal C7R87_0441 PF00206 Lyase C7R87_0441 PF08328 Adenylosuccinate lyase C-terminal C7R87_0442 PF04356 Protein of unknown function (DUF489) C7R87_0444 PF00293 NUDIX domain C7R87_0444 PF13344 Haloacid dehalogenase-like hydrolase C7R87_0445 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_0446 PF07943 Penicillin-binding protein 5, C-terminal domain C7R87_0446 PF00768 D-alanyl-D-alanine carboxypeptidase C7R87_0449 PF01975 Survival protein SurE C7R87_0450 PF01476 LysM domain C7R87_0450 PF01551 Peptidase family M23 C7R87_0451 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0451 PF03466 LysR substrate binding domain C7R87_0452 PF13654 AAA domain C7R87_0452 PF05362 Lon protease (S16) C-terminal proteolytic domain C7R87_0453 PF07690 Major Facilitator Superfamily C7R87_0454 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7R87_0455 PF13593 SBF-like CPA transporter family (DUF4137) C7R87_0456 PF01197 Ribosomal protein L31 C7R87_0459 PF04055 Radical SAM superfamily C7R87_0460 PF09285 Elongation factor P, C-terminal C7R87_0460 PF01132 Elongation factor P (EF-P) OB domain C7R87_0460 PF08207 Elongation factor P (EF-P) KOW-like domain C7R87_0461 PF13722 5TM C-terminal transporter carbon starvation CstA C7R87_0461 PF02554 Carbon starvation protein CstA C7R87_0462 PF04328 Selenoprotein, putative C7R87_0471 PF13556 PucR C-terminal helix-turn-helix domain C7R87_0471 PF17853 GGDEF-like domain C7R87_0471 PF06018 CodY GAF-like domain C7R87_0474 PF00171 Aldehyde dehydrogenase family C7R87_0475 PF00324 Amino acid permease C7R87_0476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0476 PF03466 LysR substrate binding domain C7R87_0477 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_0478 PF13737 Transposase DDE domain C7R87_0479 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_0480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C7R87_0480 PF00355 Rieske [2Fe-2S] domain C7R87_0482 PF18113 Rubredoxin binding C-terminal domain C7R87_0482 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0483 PF01266 FAD dependent oxidoreductase C7R87_0483 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C7R87_0487 PF00892 EamA-like transporter family C7R87_0489 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C7R87_0490 PF00083 Sugar (and other) transporter C7R87_0491 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C7R87_0491 PF13378 Enolase C-terminal domain-like C7R87_0492 PF00550 Phosphopantetheine attachment site C7R87_0492 PF09277 Erythronolide synthase, docking C7R87_0492 PF08659 KR domain C7R87_0492 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_0492 PF14765 Polyketide synthase dehydratase C7R87_0492 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_0492 PF16197 Ketoacyl-synthetase C-terminal extension C7R87_0492 PF00698 Acyl transferase domain C7R87_0492 PF08990 Erythronolide synthase docking C7R87_0492 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_0493 PF00440 Bacterial regulatory proteins, tetR family C7R87_0497 PF02678 Pirin C7R87_0497 PF17954 Quercetinase C-terminal cupin domain C7R87_0498 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_0499 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_0500 PF08348 YheO-like PAS domain C7R87_0500 PF13309 HTH domain C7R87_0502 PF00501 AMP-binding enzyme C7R87_0502 PF13193 AMP-binding enzyme C-terminal domain C7R87_0502 PF00668 Condensation domain C7R87_0502 PF00550 Phosphopantetheine attachment site C7R87_0503 PF00975 Thioesterase domain C7R87_0503 PF00501 AMP-binding enzyme C7R87_0503 PF00550 Phosphopantetheine attachment site C7R87_0503 PF00668 Condensation domain C7R87_0503 PF13193 AMP-binding enzyme C-terminal domain C7R87_0504 PF01032 FecCD transport family C7R87_0505 PF01032 FecCD transport family C7R87_0506 PF00005 ABC transporter C7R87_0507 PF01497 Periplasmic binding protein C7R87_0508 PF00593 TonB dependent receptor C7R87_0508 PF07715 TonB-dependent Receptor Plug Domain C7R87_0509 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C7R87_0510 PF00668 Condensation domain C7R87_0510 PF00501 AMP-binding enzyme C7R87_0510 PF00550 Phosphopantetheine attachment site C7R87_0511 PF00501 AMP-binding enzyme C7R87_0511 PF13193 AMP-binding enzyme C-terminal domain C7R87_0512 PF00550 Phosphopantetheine attachment site C7R87_0512 PF00857 Isochorismatase family C7R87_0513 PF00282 Pyridoxal-dependent decarboxylase conserved domain C7R87_0515 PF00005 ABC transporter C7R87_0515 PF00664 ABC transporter transmembrane region C7R87_0516 PF00005 ABC transporter C7R87_0516 PF00664 ABC transporter transmembrane region C7R87_0517 PF00975 Thioesterase domain C7R87_0519 PF00425 chorismate binding enzyme C7R87_0521 PF01208 Uroporphyrinogen decarboxylase (URO-D) C7R87_0522 PF05675 Protein of unknown function (DUF817) C7R87_0525 PF00144 Beta-lactamase C7R87_0529 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_0529 PF01799 [2Fe-2S] binding domain C7R87_0530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C7R87_0530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C7R87_0533 PF00218 Indole-3-glycerol phosphate synthase C7R87_0534 PF00591 Glycosyl transferase family, a/b domain C7R87_0534 PF02885 Glycosyl transferase family, helical bundle domain C7R87_0535 PF07715 TonB-dependent Receptor Plug Domain C7R87_0535 PF00593 TonB dependent receptor C7R87_0536 PF11838 ERAP1-like C-terminal domain C7R87_0536 PF01433 Peptidase family M1 domain C7R87_0537 PF00117 Glutamine amidotransferase class-I C7R87_0600 PF01476 LysM domain C7R87_0600 PF08525 Opacity-associated protein A N-terminal motif C7R87_0600 PF01551 Peptidase family M23 C7R87_0609 PF13737 Transposase DDE domain C7R87_0610 PF00884 Sulfatase C7R87_0610 PF08019 Phosphoethanolamine transferase EptA/EptB C7R87_0616 PF00557 Metallopeptidase family M24 C7R87_0616 PF05195 Aminopeptidase P, N-terminal domain C7R87_0617 PF01494 FAD binding domain C7R87_0618 PF01494 FAD binding domain C7R87_0620 PF13411 MerR HTH family regulatory protein C7R87_0623 PF01810 LysE type translocator C7R87_0624 PF03466 LysR substrate binding domain C7R87_0624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0626 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7R87_0627 PF02021 Uncharacterised protein family UPF0102 C7R87_0628 PF04972 BON domain C7R87_0630 PF09297 NADH pyrophosphatase zinc ribbon domain C7R87_0630 PF00293 NUDIX domain C7R87_0632 PF00929 Exonuclease C7R87_0633 PF01476 LysM domain C7R87_0633 PF01476 LysM domain C7R87_0633 PF01464 Transglycosylase SLT domain C7R87_0633 PF01464 Transglycosylase SLT domain C7R87_0634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7R87_0635 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0636 PF12911 N-terminal TM domain of oligopeptide transport permease C C7R87_0636 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0637 PF00005 ABC transporter C7R87_0637 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7R87_0638 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0638 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7R87_0639 PF07715 TonB-dependent Receptor Plug Domain C7R87_0639 PF00593 TonB dependent receptor C7R87_0641 PF00929 Exonuclease C7R87_0642 PF01979 Amidohydrolase family C7R87_0643 PF00563 EAL domain C7R87_0643 PF01590 GAF domain C7R87_0643 PF00990 Diguanylate cyclase, GGDEF domain C7R87_0643 PF00360 Phytochrome region C7R87_0644 PF00764 Arginosuccinate synthase C7R87_0645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7R87_0645 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0648 PF05987 Bacterial protein of unknown function (DUF898) C7R87_0649 PF03180 NLPA lipoprotein C7R87_0653 PF04717 Type VI secretion system, phage-baseplate injector C7R87_0653 PF16671 Actin cross-linking domain C7R87_0654 PF05593 RHS Repeat C7R87_0654 PF03527 RHS protein C7R87_0658 PF13737 Transposase DDE domain C7R87_0659 PF00324 Amino acid permease C7R87_0660 PF01266 FAD dependent oxidoreductase C7R87_0661 PF00324 Amino acid permease C7R87_0663 PF07729 FCD domain C7R87_0663 PF00392 Bacterial regulatory proteins, gntR family C7R87_0665 PF00171 Aldehyde dehydrogenase family C7R87_0667 PF00202 Aminotransferase class-III C7R87_0668 PF04958 Arginine N-succinyltransferase beta subunit C7R87_0669 PF00324 Amino acid permease C7R87_0670 PF13737 Transposase DDE domain C7R87_0671 PF00324 Amino acid permease C7R87_0672 PF00171 Aldehyde dehydrogenase family C7R87_0673 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C7R87_0673 PF12833 Helix-turn-helix domain C7R87_0674 PF00892 EamA-like transporter family C7R87_0675 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C7R87_0675 PF08666 SAF domain C7R87_0676 PF07690 Major Facilitator Superfamily C7R87_0677 PF13378 Enolase C-terminal domain-like C7R87_0678 PF00701 Dihydrodipicolinate synthetase family C7R87_0679 PF00171 Aldehyde dehydrogenase family C7R87_0680 PF00392 Bacterial regulatory proteins, gntR family C7R87_0680 PF07729 FCD domain C7R87_0681 PF07519 Tannase and feruloyl esterase C7R87_0684 PF03573 outer membrane porin, OprD family C7R87_0685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_0685 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_0685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_0687 PF00171 Aldehyde dehydrogenase family C7R87_0688 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0689 PF07690 Major Facilitator Superfamily C7R87_0692 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_0692 PF00175 Oxidoreductase NAD-binding domain C7R87_0693 PF00355 Rieske [2Fe-2S] domain C7R87_0695 PF03781 Sulfatase-modifying factor enzyme 1 C7R87_0696 PF00884 Sulfatase C7R87_0697 PF00884 Sulfatase C7R87_0698 PF07690 Major Facilitator Superfamily C7R87_0699 PF03573 outer membrane porin, OprD family C7R87_0700 PF05199 GMC oxidoreductase C7R87_0701 PF07859 alpha/beta hydrolase fold C7R87_0702 PF00106 short chain dehydrogenase C7R87_0703 PF00743 Flavin-binding monooxygenase-like C7R87_0704 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C7R87_0704 PF12833 Helix-turn-helix domain C7R87_0705 PF05683 Fumarase C-terminus C7R87_0706 PF05681 Fumarate hydratase (Fumerase) C7R87_0707 PF07690 Major Facilitator Superfamily C7R87_0708 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0708 PF03466 LysR substrate binding domain C7R87_0709 PF04072 Leucine carboxyl methyltransferase C7R87_0710 PF00743 Flavin-binding monooxygenase-like C7R87_0713 PF01636 Phosphotransferase enzyme family C7R87_0717 PF13340 Putative transposase of IS4/5 family (DUF4096) C7R87_0721 PF02522 Aminoglycoside 3-N-acetyltransferase C7R87_0725 PF00743 Flavin-binding monooxygenase-like C7R87_0727 PF00860 Permease family C7R87_0728 PF00962 Adenosine/AMP deaminase C7R87_0729 PF01292 Prokaryotic cytochrome b561 C7R87_0731 PF01351 Ribonuclease HII C7R87_0732 PF02599 Global regulator protein family C7R87_0733 PF00696 Amino acid kinase family C7R87_0733 PF01842 ACT domain C7R87_0733 PF13840 ACT domain C7R87_0734 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7R87_0734 PF01411 tRNA synthetases class II (A) C7R87_0734 PF02272 DHHA1 domain C7R87_0735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7R87_0735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7R87_0736 PF13393 Histidyl-tRNA synthetase C7R87_0737 PF00709 Adenylosuccinate synthetase C7R87_0740 PF00248 Aldo/keto reductase family C7R87_0741 PF00027 Cyclic nucleotide-binding domain C7R87_0741 PF13545 Crp-like helix-turn-helix domain C7R87_0742 PF02566 OsmC-like protein C7R87_0745 PF02861 Clp amino terminal domain, pathogenicity island component C7R87_0745 PF10431 C-terminal, D2-small domain, of ClpB protein C7R87_0745 PF17871 AAA lid domain C7R87_0745 PF07724 AAA domain (Cdc48 subfamily) C7R87_0745 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_0748 PF10672 S-adenosylmethionine-dependent methyltransferase C7R87_0748 PF01170 Putative RNA methylase family UPF0020 C7R87_0748 PF02926 THUMP domain C7R87_0750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7R87_0750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7R87_0751 PF01979 Amidohydrolase family C7R87_0752 PF13488 Glycine zipper C7R87_0752 PF00691 OmpA family C7R87_0754 PF00043 Glutathione S-transferase, C-terminal domain C7R87_0754 PF13417 Glutathione S-transferase, N-terminal domain C7R87_0755 PF02390 Putative methyltransferase C7R87_0757 PF00043 Glutathione S-transferase, C-terminal domain C7R87_0757 PF02798 Glutathione S-transferase, N-terminal domain C7R87_0759 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0759 PF13192 Thioredoxin domain C7R87_0763 PF10417 C-terminal domain of 1-Cys peroxiredoxin C7R87_0763 PF00578 AhpC/TSA family C7R87_0764 PF04408 Helicase associated domain (HA2) C7R87_0764 PF00271 Helicase conserved C-terminal domain C7R87_0764 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C7R87_0764 PF00270 DEAD/DEAH box helicase C7R87_0764 PF11898 Domain of unknown function (DUF3418) C7R87_0765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C7R87_0765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C7R87_0767 PF07690 Major Facilitator Superfamily C7R87_0768 PF03594 Benzoate membrane transport protein C7R87_0769 PF00106 short chain dehydrogenase C7R87_0770 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_0770 PF00970 Oxidoreductase FAD-binding domain C7R87_0770 PF00175 Oxidoreductase NAD-binding domain C7R87_0771 PF00866 Ring hydroxylating beta subunit C7R87_0772 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C7R87_0772 PF00355 Rieske [2Fe-2S] domain C7R87_0773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0773 PF03466 LysR substrate binding domain C7R87_0774 PF00403 Heavy-metal-associated domain C7R87_0775 PF00403 Heavy-metal-associated domain C7R87_0776 PF00376 MerR family regulatory protein C7R87_0776 PF09278 MerR, DNA binding C7R87_0783 PF13742 OB-fold nucleic acid binding domain C7R87_0783 PF02601 Exonuclease VII, large subunit C7R87_0789 PF01810 LysE type translocator C7R87_0790 PF00313 'Cold-shock' DNA-binding domain C7R87_0792 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7R87_0792 PF03807 NADP oxidoreductase coenzyme F420-dependent C7R87_0800 PF07690 Major Facilitator Superfamily C7R87_0801 PF01638 HxlR-like helix-turn-helix C7R87_0807 PF09190 DALR domain C7R87_0807 PF01406 tRNA synthetases class I (C) catalytic domain C7R87_0808 PF01380 SIS domain C7R87_0808 PF00571 CBS domain C7R87_0811 PF03968 OstA-like protein C7R87_0812 PF12399 Branched-chain amino acid ATP-binding cassette transporter C7R87_0812 PF00005 ABC transporter C7R87_0814 PF00005 ABC transporter C7R87_0814 PF00664 ABC transporter transmembrane region C7R87_0814 PF03412 Peptidase C39 family C7R87_0816 PF01205 Uncharacterized protein family UPF0029 C7R87_0817 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_0819 PF01596 O-methyltransferase C7R87_0821 PF00037 4Fe-4S binding domain C7R87_0821 PF11953 Domain of unknown function (DUF3470) C7R87_0823 PF05188 MutS domain II C7R87_0823 PF05190 MutS family domain IV C7R87_0823 PF05192 MutS domain III C7R87_0823 PF01624 MutS domain I C7R87_0823 PF00488 MutS domain V C7R87_0825 PF01037 Lrp/AsnC ligand binding domain C7R87_0827 PF00892 EamA-like transporter family C7R87_0828 PF03707 Bacterial signalling protein N terminal repeat C7R87_0828 PF00563 EAL domain C7R87_0828 PF00990 Diguanylate cyclase, GGDEF domain C7R87_0829 PF03279 Bacterial lipid A biosynthesis acyltransferase C7R87_0832 PF07690 Major Facilitator Superfamily C7R87_0836 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7R87_0836 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7R87_0839 PF13419 Haloacid dehalogenase-like hydrolase C7R87_0841 PF16671 Actin cross-linking domain C7R87_0841 PF04717 Type VI secretion system, phage-baseplate injector C7R87_0842 PF03527 RHS protein C7R87_0842 PF14220 Domain of unknown function (DUF4329) C7R87_0842 PF05593 RHS Repeat C7R87_0845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0845 PF03466 LysR substrate binding domain C7R87_0846 PF01566 Natural resistance-associated macrophage protein C7R87_0847 PF03746 LamB/YcsF family C7R87_0848 PF07286 Protein of unknown function (DUF1445) C7R87_0850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_0850 PF02785 Biotin carboxylase C-terminal domain C7R87_0850 PF00289 Biotin carboxylase, N-terminal domain C7R87_0850 PF00364 Biotin-requiring enzyme C7R87_0851 PF00654 Voltage gated chloride channel C7R87_0856 PF00440 Bacterial regulatory proteins, tetR family C7R87_0858 PF13823 Alcohol dehydrogenase GroES-associated C7R87_0858 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_0858 PF00107 Zinc-binding dehydrogenase C7R87_0862 PF02785 Biotin carboxylase C-terminal domain C7R87_0862 PF00289 Biotin carboxylase, N-terminal domain C7R87_0862 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_0863 PF02525 Flavodoxin-like fold C7R87_0864 PF01638 HxlR-like helix-turn-helix C7R87_0868 PF01402 Ribbon-helix-helix protein, copG family C7R87_0868 PF08753 NikR C terminal nickel binding domain C7R87_0869 PF01425 Amidase C7R87_0870 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7R87_0871 PF00005 ABC transporter C7R87_0885 PF00691 OmpA family C7R87_0885 PF01389 OmpA-like transmembrane domain C7R87_0887 PF10431 C-terminal, D2-small domain, of ClpB protein C7R87_0887 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_0887 PF07724 AAA domain (Cdc48 subfamily) C7R87_0887 PF17871 AAA lid domain C7R87_0893 PF03466 LysR substrate binding domain C7R87_0893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7R87_0896 PF07690 Major Facilitator Superfamily C7R87_0899 PF02677 Epoxyqueuosine reductase QueH C7R87_0900 PF09278 MerR, DNA binding C7R87_0900 PF00376 MerR family regulatory protein C7R87_0904 PF00701 Dihydrodipicolinate synthetase family C7R87_0906 PF00392 Bacterial regulatory proteins, gntR family C7R87_0907 PF05544 Proline racemase C7R87_0908 PF01266 FAD dependent oxidoreductase C7R87_0910 PF04324 BFD-like [2Fe-2S] binding domain C7R87_0910 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_0914 PF00083 Sugar (and other) transporter C7R87_0915 PF00171 Aldehyde dehydrogenase family C7R87_0916 PF13520 Amino acid permease C7R87_0917 PF03313 Serine dehydratase alpha chain C7R87_0917 PF03315 Serine dehydratase beta chain C7R87_0918 PF01575 MaoC like domain C7R87_0918 PF00171 Aldehyde dehydrogenase family C7R87_0919 PF05138 Phenylacetic acid catabolic protein C7R87_0920 PF06243 Phenylacetic acid degradation B C7R87_0921 PF05138 Phenylacetic acid catabolic protein C7R87_0922 PF01883 Iron-sulfur cluster assembly protein C7R87_0923 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_0923 PF00175 Oxidoreductase NAD-binding domain C7R87_0923 PF00970 Oxidoreductase FAD-binding domain C7R87_0924 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0925 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0926 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain C7R87_0926 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7R87_0926 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7R87_0927 PF00108 Thiolase, N-terminal domain C7R87_0927 PF02803 Thiolase, C-terminal domain C7R87_0928 PF14535 AMP-binding enzyme C-terminal domain C7R87_0928 PF00501 AMP-binding enzyme C7R87_0929 PF08223 PaaX-like protein C-terminal domain C7R87_0929 PF07848 PaaX-like protein C7R87_0930 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_0931 PF03061 Thioesterase superfamily C7R87_0938 PF00199 Catalase C7R87_0939 PF01292 Prokaryotic cytochrome b561 C7R87_0943 PF12697 Alpha/beta hydrolase family C7R87_0944 PF01613 Flavin reductase like domain C7R87_0945 PF00296 Luciferase-like monooxygenase C7R87_0946 PF00171 Aldehyde dehydrogenase family C7R87_0948 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7R87_0950 PF00171 Aldehyde dehydrogenase family C7R87_0951 PF02627 Carboxymuconolactone decarboxylase family C7R87_0952 PF03466 LysR substrate binding domain C7R87_0952 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0953 PF02525 Flavodoxin-like fold C7R87_0954 PF09339 IclR helix-turn-helix domain C7R87_0954 PF01614 Bacterial transcriptional regulator C7R87_0955 PF01494 FAD binding domain C7R87_0956 PF07702 UTRA domain C7R87_0956 PF00392 Bacterial regulatory proteins, gntR family C7R87_0958 PF08402 TOBE domain C7R87_0958 PF00005 ABC transporter C7R87_0959 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_0960 PF01266 FAD dependent oxidoreductase C7R87_0961 PF00266 Aminotransferase class-V C7R87_0962 PF13419 Haloacid dehalogenase-like hydrolase C7R87_0963 PF07690 Major Facilitator Superfamily C7R87_0964 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_0964 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_0964 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_0965 PF02515 CoA-transferase family III C7R87_0966 PF09339 IclR helix-turn-helix domain C7R87_0967 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0968 PF03060 Nitronate monooxygenase C7R87_0969 PF07690 Major Facilitator Superfamily C7R87_0970 PF09339 IclR helix-turn-helix domain C7R87_0971 PF02803 Thiolase, C-terminal domain C7R87_0971 PF00108 Thiolase, N-terminal domain C7R87_0972 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7R87_0972 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain C7R87_0972 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7R87_0974 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_0975 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_0975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_0976 PF07690 Major Facilitator Superfamily C7R87_0977 PF01144 Coenzyme A transferase C7R87_0978 PF01144 Coenzyme A transferase C7R87_0980 PF07690 Major Facilitator Superfamily C7R87_0982 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_0982 PF12806 Acetyl-CoA dehydrogenase C-terminal like C7R87_0982 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_0982 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_0985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_0985 PF03466 LysR substrate binding domain C7R87_0986 PF00682 HMGL-like C7R87_0987 PF00364 Biotin-requiring enzyme C7R87_0987 PF02785 Biotin carboxylase C-terminal domain C7R87_0987 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_0987 PF00289 Biotin carboxylase, N-terminal domain C7R87_0988 PF00378 Enoyl-CoA hydratase/isomerase C7R87_0989 PF01039 Carboxyl transferase domain C7R87_0990 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_0990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_0990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_0991 PF00440 Bacterial regulatory proteins, tetR family C7R87_0992 PF13193 AMP-binding enzyme C-terminal domain C7R87_0992 PF00501 AMP-binding enzyme C7R87_0996 PF03466 LysR substrate binding domain C7R87_0996 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1003 PF00994 Probable molybdopterin binding domain C7R87_1003 PF18146 Damage-inducible protein CinA KH domain C7R87_1003 PF02464 Competence-damaged protein C7R87_1005 PF00199 Catalase C7R87_1005 PF18011 C-terminal domain found in long catalases C7R87_1005 PF06628 Catalase-related immune-responsive C7R87_1010 PF00717 Peptidase S24-like C7R87_1012 PF01037 Lrp/AsnC ligand binding domain C7R87_1012 PF13404 AsnC-type helix-turn-helix domain C7R87_1014 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_1014 PF00512 His Kinase A (phospho-acceptor) domain C7R87_1014 PF00072 Response regulator receiver domain C7R87_1014 PF09308 LuxQ, periplasmic C7R87_1015 PF00072 Response regulator receiver domain C7R87_1018 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1019 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1020 PF00005 ABC transporter C7R87_1021 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7R87_1022 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7R87_1024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1024 PF03466 LysR substrate binding domain C7R87_1025 PF01810 LysE type translocator C7R87_1027 PF00266 Aminotransferase class-V C7R87_1029 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_1030 PF00581 Rhodanese-like domain C7R87_1032 PF03466 LysR substrate binding domain C7R87_1032 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1033 PF02798 Glutathione S-transferase, N-terminal domain C7R87_1034 PF14834 Glutathione S-transferase, C-terminal domain C7R87_1034 PF02798 Glutathione S-transferase, N-terminal domain C7R87_1035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1035 PF03466 LysR substrate binding domain C7R87_1036 PF03788 LrgA family C7R87_1037 PF04172 LrgB-like family C7R87_1038 PF00392 Bacterial regulatory proteins, gntR family C7R87_1038 PF00155 Aminotransferase class I and II C7R87_1041 PF07690 Major Facilitator Superfamily C7R87_1043 PF16957 Malonate decarboxylase, alpha subunit, transporter C7R87_1044 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C7R87_1045 PF06857 Malonate decarboxylase delta subunit (MdcD) C7R87_1046 PF01039 Carboxyl transferase domain C7R87_1048 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C7R87_1049 PF00698 Acyl transferase domain C7R87_1052 PF03466 LysR substrate binding domain C7R87_1052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1053 PF00392 Bacterial regulatory proteins, gntR family C7R87_1053 PF00155 Aminotransferase class I and II C7R87_1055 PF02322 Cytochrome bd terminal oxidase subunit II C7R87_1056 PF01654 Cytochrome bd terminal oxidase subunit I C7R87_1059 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_1059 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1059 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1060 PF00296 Luciferase-like monooxygenase C7R87_1061 PF00083 Sugar (and other) transporter C7R87_1063 PF13737 Transposase DDE domain C7R87_1065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C7R87_1066 PF00005 ABC transporter C7R87_1067 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1068 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C7R87_1069 PF01177 Asp/Glu/Hydantoin racemase C7R87_1070 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7R87_1072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1072 PF03466 LysR substrate binding domain C7R87_1074 PF01979 Amidohydrolase family C7R87_1074 PF13382 Adenine deaminase C-terminal domain C7R87_1076 PF03960 ArsC family C7R87_1077 PF01022 Bacterial regulatory protein, arsR family C7R87_1078 PF01758 Sodium Bile acid symporter family C7R87_1079 PF03466 LysR substrate binding domain C7R87_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1083 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_1083 PF13192 Thioredoxin domain C7R87_1086 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_1087 PF00588 SpoU rRNA Methylase family C7R87_1088 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7R87_1088 PF14579 Helix-hairpin-helix motif C7R87_1088 PF02811 PHP domain C7R87_1088 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7R87_1088 PF01336 OB-fold nucleic acid binding domain C7R87_1089 PF00710 Asparaginase, N-terminal C7R87_1089 PF17763 Glutaminase/Asparaginase C-terminal domain C7R87_1090 PF00375 Sodium:dicarboxylate symporter family C7R87_1091 PF00155 Aminotransferase class I and II C7R87_1092 PF01641 SelR domain C7R87_1093 PF00255 Glutathione peroxidase C7R87_1094 PF12852 Cupin C7R87_1094 PF12833 Helix-turn-helix domain C7R87_1096 PF00155 Aminotransferase class I and II C7R87_1097 PF08335 GlnD PII-uridylyltransferase C7R87_1097 PF01909 Nucleotidyltransferase domain C7R87_1097 PF01966 HD domain C7R87_1098 PF02222 ATP-grasp domain C7R87_1100 PF05437 Branched-chain amino acid transport protein (AzlD) C7R87_1101 PF03591 AzlC protein C7R87_1105 PF00665 Integrase core domain C7R87_1105 PF13333 Integrase core domain C7R87_1105 PF13276 HTH-like domain C7R87_1106 PF01527 Transposase C7R87_1108 PF06071 Protein of unknown function (DUF933) C7R87_1108 PF01926 50S ribosome-binding GTPase C7R87_1109 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1110 PF00005 ABC transporter C7R87_1110 PF09383 NIL domain C7R87_1111 PF03180 NLPA lipoprotein C7R87_1112 PF03180 NLPA lipoprotein C7R87_1113 PF00296 Luciferase-like monooxygenase C7R87_1115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1119 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1120 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1121 PF00005 ABC transporter C7R87_1123 PF01037 Lrp/AsnC ligand binding domain C7R87_1124 PF01709 Transcriptional regulator C7R87_1126 PF00440 Bacterial regulatory proteins, tetR family C7R87_1132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1132 PF03466 LysR substrate binding domain C7R87_1134 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7R87_1136 PF00892 EamA-like transporter family C7R87_1137 PF13954 PapC N-terminal domain C7R87_1137 PF13953 PapC C-terminal domain C7R87_1137 PF00577 Outer membrane usher protein C7R87_1141 PF00577 Outer membrane usher protein C7R87_1141 PF13954 PapC N-terminal domain C7R87_1141 PF13953 PapC C-terminal domain C7R87_1142 PF02753 Pili assembly chaperone PapD, C-terminal domain C7R87_1142 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C7R87_1143 PF16970 Type-1 fimbrial protein, A C7R87_1146 PF06968 Biotin and Thiamin Synthesis associated domain C7R87_1146 PF04055 Radical SAM superfamily C7R87_1147 PF08331 Domain of unknown function (DUF1730) C7R87_1148 PF01256 Carbohydrate kinase C7R87_1148 PF03853 YjeF-related protein N-terminus C7R87_1149 PF02075 Crossover junction endodeoxyribonuclease RuvC C7R87_1153 PF00905 Penicillin binding protein transpeptidase domain C7R87_1157 PF00438 S-adenosylmethionine synthetase, N-terminal domain C7R87_1157 PF02772 S-adenosylmethionine synthetase, central domain C7R87_1157 PF02773 S-adenosylmethionine synthetase, C-terminal domain C7R87_1158 PF02779 Transketolase, pyrimidine binding domain C7R87_1158 PF02780 Transketolase, C-terminal domain C7R87_1158 PF00456 Transketolase, thiamine diphosphate binding domain C7R87_1160 PF04264 YceI-like domain C7R87_1162 PF09992 Phosphodiester glycosidase C7R87_1164 PF05958 tRNA (Uracil-5-)-methyltransferase C7R87_1165 PF04229 GrpB protein C7R87_1166 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C7R87_1166 PF14850 DNA-binding domain of Proline dehydrogenase C7R87_1166 PF01619 Proline dehydrogenase C7R87_1166 PF00171 Aldehyde dehydrogenase family C7R87_1168 PF01037 Lrp/AsnC ligand binding domain C7R87_1169 PF00474 Sodium:solute symporter family C7R87_1170 PF02146 Sir2 family C7R87_1174 PF01597 Glycine cleavage H-protein C7R87_1175 PF12833 Helix-turn-helix domain C7R87_1175 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C7R87_1177 PF00664 ABC transporter transmembrane region C7R87_1177 PF00005 ABC transporter C7R87_1178 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C7R87_1179 PF06912 Protein of unknown function (DUF1275) C7R87_1180 PF00375 Sodium:dicarboxylate symporter family C7R87_1183 PF08007 Cupin superfamily protein C7R87_1184 PF02545 Maf-like protein C7R87_1186 PF00162 Phosphoglycerate kinase C7R87_1188 PF01116 Fructose-bisphosphate aldolase class-II C7R87_1189 PF00639 PPIC-type PPIASE domain C7R87_1189 PF09312 SurA N-terminal domain C7R87_1190 PF04453 LPS transport system D C7R87_1190 PF03968 OstA-like protein C7R87_1191 PF01636 Phosphotransferase enzyme family C7R87_1192 PF00483 Nucleotidyl transferase C7R87_1193 PF02527 rRNA small subunit methyltransferase G C7R87_1194 PF13614 AAA domain C7R87_1195 PF02195 ParB-like nuclease domain C7R87_1195 PF17762 HTH domain found in ParB protein C7R87_1196 PF01618 MotA/TolQ/ExbB proton channel family C7R87_1198 PF00005 ABC transporter C7R87_1198 PF00664 ABC transporter transmembrane region C7R87_1199 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C7R87_1200 PF02348 Cytidylyltransferase C7R87_1201 PF09115 DNA polymerase III, delta subunit, C terminal C7R87_1203 PF01026 TatD related DNase C7R87_1206 PF07963 Prokaryotic N-terminal methylation motif C7R87_1206 PF02501 Type II secretion system (T2SS), protein I C7R87_1207 PF07963 Prokaryotic N-terminal methylation motif C7R87_1207 PF11612 Type II secretion system (T2SS), protein J C7R87_1208 PF03934 Type II secretion system (T2SS), protein K C7R87_1210 PF03167 Uracil DNA glycosylase superfamily C7R87_1212 PF14437 MafB19-like deaminase C7R87_1214 PF02224 Cytidylate kinase C7R87_1215 PF00575 S1 RNA binding domain C7R87_1216 PF00216 Bacterial DNA-binding protein C7R87_1218 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C7R87_1220 PF00743 Flavin-binding monooxygenase-like C7R87_1222 PF03969 AFG1-like ATPase C7R87_1223 PF01274 Malate synthase C7R87_1228 PF02472 Biopolymer transport protein ExbD/TolR C7R87_1229 PF02472 Biopolymer transport protein ExbD/TolR C7R87_1230 PF01618 MotA/TolQ/ExbB proton channel family C7R87_1232 PF00593 TonB dependent receptor C7R87_1232 PF07715 TonB-dependent Receptor Plug Domain C7R87_1235 PF01432 Peptidase family M3 C7R87_1236 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1237 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1237 PF12911 N-terminal TM domain of oligopeptide transport permease C C7R87_1238 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1239 PF00005 ABC transporter C7R87_1239 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7R87_1242 PF00459 Inositol monophosphatase family C7R87_1244 PF01649 Ribosomal protein S20 C7R87_1245 PF13460 NAD(P)H-binding C7R87_1246 PF03737 Aldolase/RraA C7R87_1250 PF02559 CarD-like/TRCF domain C7R87_1250 PF00270 DEAD/DEAH box helicase C7R87_1250 PF00271 Helicase conserved C-terminal domain C7R87_1250 PF03461 TRCF domain C7R87_1250 PF17757 UvrB interaction domain C7R87_1252 PF00211 Adenylate and Guanylate cyclase catalytic domain C7R87_1253 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_1254 PF00012 Hsp70 protein C7R87_1255 PF00226 DnaJ domain C7R87_1255 PF07743 HSCB C-terminal oligomerisation domain C7R87_1256 PF01521 Iron-sulphur cluster biosynthesis C7R87_1257 PF01592 NifU-like N terminal domain C7R87_1258 PF00266 Aminotransferase class-V C7R87_1259 PF02082 Transcriptional regulator C7R87_1262 PF00216 Bacterial DNA-binding protein C7R87_1263 PF00639 PPIC-type PPIASE domain C7R87_1263 PF09312 SurA N-terminal domain C7R87_1264 PF12852 Cupin C7R87_1264 PF12833 Helix-turn-helix domain C7R87_1265 PF00487 Fatty acid desaturase C7R87_1266 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1266 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_1266 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1267 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1267 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1267 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_1268 PF03109 ABC1 family C7R87_1270 PF04073 Aminoacyl-tRNA editing domain C7R87_1271 PF06276 Ferric iron reductase FhuF-like transporter C7R87_1271 PF04183 IucA / IucC family C7R87_1272 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C7R87_1273 PF07690 Major Facilitator Superfamily C7R87_1274 PF06276 Ferric iron reductase FhuF-like transporter C7R87_1274 PF04183 IucA / IucC family C7R87_1275 PF04183 IucA / IucC family C7R87_1275 PF06276 Ferric iron reductase FhuF-like transporter C7R87_1278 PF00593 TonB dependent receptor C7R87_1278 PF07715 TonB-dependent Receptor Plug Domain C7R87_1286 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C7R87_1287 PF02277 Phosphoribosyltransferase C7R87_1290 PF02654 Cobalamin-5-phosphate synthase C7R87_1291 PF00793 DAHP synthetase I family C7R87_1292 PF01925 Sulfite exporter TauE/SafE C7R87_1295 PF00593 TonB dependent receptor C7R87_1295 PF07715 TonB-dependent Receptor Plug Domain C7R87_1296 PF00593 TonB dependent receptor C7R87_1296 PF07660 Secretin and TonB N terminus short domain C7R87_1296 PF07715 TonB-dependent Receptor Plug Domain C7R87_1297 PF02684 Lipid-A-disaccharide synthetase C7R87_1299 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_1300 PF00005 ABC transporter C7R87_1307 PF01230 HIT domain C7R87_1314 PF08241 Methyltransferase domain C7R87_1315 PF00561 alpha/beta hydrolase fold C7R87_1316 PF01053 Cys/Met metabolism PLP-dependent enzyme C7R87_1318 PF02575 YbaB/EbfC DNA-binding family C7R87_1319 PF13662 Toprim domain C7R87_1319 PF02132 RecR protein C7R87_1320 PF00570 HRDC domain C7R87_1320 PF01612 3'-5' exonuclease C7R87_1324 PF05166 YcgL domain C7R87_1326 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_1326 PF17862 AAA+ lid domain C7R87_1326 PF01434 Peptidase family M41 C7R87_1328 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_1329 PF05175 Methyltransferase small domain C7R87_1330 PF01264 Chorismate synthase C7R87_1331 PF08448 PAS fold C7R87_1331 PF00990 Diguanylate cyclase, GGDEF domain C7R87_1336 PF04055 Radical SAM superfamily C7R87_1337 PF00676 Dehydrogenase E1 component C7R87_1338 PF02780 Transketolase, C-terminal domain C7R87_1338 PF02779 Transketolase, pyrimidine binding domain C7R87_1339 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7R87_1339 PF00364 Biotin-requiring enzyme C7R87_1339 PF02817 e3 binding domain C7R87_1340 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_1340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7R87_1343 PF00106 short chain dehydrogenase C7R87_1344 PF00107 Zinc-binding dehydrogenase C7R87_1344 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_1345 PF01062 Bestrophin, RFP-TM, chloride channel C7R87_1346 PF00072 Response regulator receiver domain C7R87_1346 PF00158 Sigma-54 interaction domain C7R87_1346 PF02954 Bacterial regulatory protein, Fis family C7R87_1347 PF00753 Metallo-beta-lactamase superfamily C7R87_1347 PF04273 Putative phosphatase (DUF442) C7R87_1348 PF00753 Metallo-beta-lactamase superfamily C7R87_1348 PF04273 Putative phosphatase (DUF442) C7R87_1349 PF01925 Sulfite exporter TauE/SafE C7R87_1352 PF12833 Helix-turn-helix domain C7R87_1352 PF06445 GyrI-like small molecule binding domain C7R87_1353 PF01638 HxlR-like helix-turn-helix C7R87_1354 PF02525 Flavodoxin-like fold C7R87_1359 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C7R87_1360 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1361 PF00005 ABC transporter C7R87_1364 PF00083 Sugar (and other) transporter C7R87_1365 PF00593 TonB dependent receptor C7R87_1365 PF07715 TonB-dependent Receptor Plug Domain C7R87_1366 PF00206 Lyase C7R87_1366 PF10415 Fumarase C C-terminus C7R87_1369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1369 PF03466 LysR substrate binding domain C7R87_1370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1370 PF03466 LysR substrate binding domain C7R87_1371 PF02803 Thiolase, C-terminal domain C7R87_1371 PF00108 Thiolase, N-terminal domain C7R87_1372 PF02667 Short chain fatty acid transporter C7R87_1373 PF01144 Coenzyme A transferase C7R87_1374 PF01144 Coenzyme A transferase C7R87_1375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1375 PF03466 LysR substrate binding domain C7R87_1379 PF06719 AraC-type transcriptional regulator N-terminus C7R87_1379 PF12833 Helix-turn-helix domain C7R87_1380 PF07690 Major Facilitator Superfamily C7R87_1381 PF01738 Dienelactone hydrolase family C7R87_1384 PF01613 Flavin reductase like domain C7R87_1386 PF12833 Helix-turn-helix domain C7R87_1386 PF14525 AraC-binding-like domain C7R87_1387 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_1387 PF00970 Oxidoreductase FAD-binding domain C7R87_1387 PF00175 Oxidoreductase NAD-binding domain C7R87_1388 PF00866 Ring hydroxylating beta subunit C7R87_1389 PF00355 Rieske [2Fe-2S] domain C7R87_1389 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C7R87_1390 PF03459 TOBE domain C7R87_1390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1392 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1393 PF00005 ABC transporter C7R87_1393 PF03459 TOBE domain C7R87_1394 PF00106 short chain dehydrogenase C7R87_1395 PF00857 Isochorismatase family C7R87_1395 PF00550 Phosphopantetheine attachment site C7R87_1397 PF00149 Calcineurin-like phosphoesterase C7R87_1398 PF02503 Polyphosphate kinase middle domain C7R87_1398 PF17941 Polyphosphate kinase C-terminal domain 1 C7R87_1398 PF13090 Polyphosphate kinase C-terminal domain 2 C7R87_1398 PF13089 Polyphosphate kinase N-terminal domain C7R87_1399 PF08042 PqqA family C7R87_1400 PF12706 Beta-lactamase superfamily domain C7R87_1401 PF03070 TENA/THI-4/PQQC family C7R87_1402 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C7R87_1403 PF13186 Iron-sulfur cluster-binding domain C7R87_1403 PF04055 Radical SAM superfamily C7R87_1404 PF01244 Membrane dipeptidase (Peptidase family M19) C7R87_1408 PF13091 PLD-like domain C7R87_1412 PF00199 Catalase C7R87_1414 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_1414 PF00107 Zinc-binding dehydrogenase C7R87_1416 PF00419 Fimbrial protein C7R87_1417 PF00577 Outer membrane usher protein C7R87_1417 PF13953 PapC C-terminal domain C7R87_1417 PF13954 PapC N-terminal domain C7R87_1418 PF02753 Pili assembly chaperone PapD, C-terminal domain C7R87_1418 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C7R87_1419 PF16970 Type-1 fimbrial protein, A C7R87_1422 PF01266 FAD dependent oxidoreductase C7R87_1425 PF01593 Flavin containing amine oxidoreductase C7R87_1426 PF00743 Flavin-binding monooxygenase-like C7R87_1427 PF12146 Serine aminopeptidase, S33 C7R87_1428 PF02321 Outer membrane efflux protein C7R87_1429 PF00873 AcrB/AcrD/AcrF family C7R87_1430 PF00529 HlyD membrane-fusion protein of T1SS C7R87_1430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_1431 PF00486 Transcriptional regulatory protein, C terminal C7R87_1431 PF00072 Response regulator receiver domain C7R87_1432 PF00512 His Kinase A (phospho-acceptor) domain C7R87_1432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_1432 PF16527 Two-component sensor protein CpxA, periplasmic domain C7R87_1432 PF00672 HAMP domain C7R87_1434 PF12833 Helix-turn-helix domain C7R87_1434 PF02311 AraC-like ligand binding domain C7R87_1435 PF12146 Serine aminopeptidase, S33 C7R87_1445 PF04607 Region found in RelA / SpoT proteins C7R87_1445 PF13291 ACT domain C7R87_1445 PF02824 TGS domain C7R87_1447 PF01975 Survival protein SurE C7R87_1452 PF07690 Major Facilitator Superfamily C7R87_1453 PF13533 Biotin-lipoyl like C7R87_1454 PF01425 Amidase C7R87_1455 PF00196 Bacterial regulatory proteins, luxR family C7R87_1471 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C7R87_1472 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C7R87_1472 PF14572 Phosphoribosyl synthetase-associated domain C7R87_1476 PF00005 ABC transporter C7R87_1480 PF00107 Zinc-binding dehydrogenase C7R87_1480 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_1483 PF06719 AraC-type transcriptional regulator N-terminus C7R87_1483 PF12833 Helix-turn-helix domain C7R87_1484 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7R87_1484 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7R87_1485 PF07690 Major Facilitator Superfamily C7R87_1486 PF01370 NAD dependent epimerase/dehydratase family C7R87_1487 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1487 PF03466 LysR substrate binding domain C7R87_1489 PF00920 Dehydratase family C7R87_1490 PF00171 Aldehyde dehydrogenase family C7R87_1496 PF03466 LysR substrate binding domain C7R87_1496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1497 PF13378 Enolase C-terminal domain-like C7R87_1497 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C7R87_1498 PF02426 Muconolactone delta-isomerase C7R87_1499 PF04444 Catechol dioxygenase N terminus C7R87_1499 PF00775 Dioxygenase C7R87_1500 PF01144 Coenzyme A transferase C7R87_1501 PF01144 Coenzyme A transferase C7R87_1502 PF02803 Thiolase, C-terminal domain C7R87_1502 PF00108 Thiolase, N-terminal domain C7R87_1503 PF12146 Serine aminopeptidase, S33 C7R87_1504 PF01804 Penicillin amidase C7R87_1505 PF00171 Aldehyde dehydrogenase family C7R87_1507 PF02727 Copper amine oxidase, N2 domain C7R87_1507 PF07833 Copper amine oxidase N-terminal domain C7R87_1507 PF02728 Copper amine oxidase, N3 domain C7R87_1507 PF01179 Copper amine oxidase, enzyme domain C7R87_1508 PF12833 Helix-turn-helix domain C7R87_1508 PF02311 AraC-like ligand binding domain C7R87_1509 PF01613 Flavin reductase like domain C7R87_1510 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_1510 PF00175 Oxidoreductase NAD-binding domain C7R87_1513 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C7R87_1513 PF00355 Rieske [2Fe-2S] domain C7R87_1516 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1517 PF01425 Amidase C7R87_1519 PF07690 Major Facilitator Superfamily C7R87_1521 PF00106 short chain dehydrogenase C7R87_1524 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1524 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1524 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_1525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1525 PF03466 LysR substrate binding domain C7R87_1526 PF09339 IclR helix-turn-helix domain C7R87_1526 PF01614 Bacterial transcriptional regulator C7R87_1527 PF00753 Metallo-beta-lactamase superfamily C7R87_1529 PF04143 Sulphur transport C7R87_1531 PF01011 PQQ enzyme repeat C7R87_1531 PF13360 PQQ-like domain C7R87_1532 PF04966 Carbohydrate-selective porin, OprB family C7R87_1533 PF05048 Periplasmic copper-binding protein (NosD) C7R87_1534 PF01487 Type I 3-dehydroquinase C7R87_1535 PF00775 Dioxygenase C7R87_1536 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C7R87_1536 PF00775 Dioxygenase C7R87_1537 PF02627 Carboxymuconolactone decarboxylase family C7R87_1538 PF07690 Major Facilitator Superfamily C7R87_1539 PF00561 alpha/beta hydrolase fold C7R87_1540 PF00206 Lyase C7R87_1540 PF10397 Adenylosuccinate lyase C-terminus C7R87_1541 PF02803 Thiolase, C-terminal domain C7R87_1541 PF00108 Thiolase, N-terminal domain C7R87_1542 PF01144 Coenzyme A transferase C7R87_1543 PF01144 Coenzyme A transferase C7R87_1544 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C7R87_1545 PF04977 Septum formation initiator C7R87_1546 PF04239 Protein of unknown function (DUF421) C7R87_1547 PF00113 Enolase, C-terminal TIM barrel domain C7R87_1547 PF03952 Enolase, N-terminal domain C7R87_1548 PF00793 DAHP synthetase I family C7R87_1549 PF06418 CTP synthase N-terminus C7R87_1549 PF00117 Glutamine amidotransferase class-I C7R87_1555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7R87_1555 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_1558 PF00793 DAHP synthetase I family C7R87_1559 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C7R87_1560 PF10431 C-terminal, D2-small domain, of ClpB protein C7R87_1560 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_1560 PF07724 AAA domain (Cdc48 subfamily) C7R87_1560 PF02861 Clp amino terminal domain, pathogenicity island component C7R87_1560 PF17871 AAA lid domain C7R87_1561 PF02617 ATP-dependent Clp protease adaptor protein ClpS C7R87_1563 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7R87_1563 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7R87_1567 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C7R87_1568 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_1568 PF00585 C-terminal regulatory domain of Threonine dehydratase C7R87_1569 PF02254 TrkA-N domain C7R87_1569 PF02080 TrkA-C domain C7R87_1570 PF02386 Cation transport protein C7R87_1571 PF02253 Phospholipase A1 C7R87_1572 PF08367 Peptidase M16C associated C7R87_1572 PF05193 Peptidase M16 inactive domain C7R87_1572 PF00675 Insulinase (Peptidase family M16) C7R87_1573 PF07715 TonB-dependent Receptor Plug Domain C7R87_1573 PF00593 TonB dependent receptor C7R87_1574 PF00294 pfkB family carbohydrate kinase C7R87_1576 PF07290 Protein of unknown function (DUF1449) C7R87_1577 PF13737 Transposase DDE domain C7R87_1578 PF01654 Cytochrome bd terminal oxidase subunit I C7R87_1579 PF02322 Cytochrome bd terminal oxidase subunit II C7R87_1582 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C7R87_1584 PF02881 SRP54-type protein, helical bundle domain C7R87_1584 PF00448 SRP54-type protein, GTPase domain C7R87_1590 PF00571 CBS domain C7R87_1590 PF00478 IMP dehydrogenase / GMP reductase domain C7R87_1591 PF00202 Aminotransferase class-III C7R87_1592 PF00462 Glutaredoxin C7R87_1594 PF03466 LysR substrate binding domain C7R87_1594 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1595 PF00557 Metallopeptidase family M24 C7R87_1596 PF05525 Branched-chain amino acid transport protein C7R87_1600 PF00391 PEP-utilising enzyme, mobile domain C7R87_1600 PF05524 PEP-utilising enzyme, N-terminal C7R87_1600 PF02896 PEP-utilising enzyme, TIM barrel domain C7R87_1600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7R87_1600 PF00381 PTS HPr component phosphorylation site C7R87_1601 PF00294 pfkB family carbohydrate kinase C7R87_1602 PF02378 Phosphotransferase system, EIIC C7R87_1602 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7R87_1607 PF00990 Diguanylate cyclase, GGDEF domain C7R87_1607 PF03707 Bacterial signalling protein N terminal repeat C7R87_1607 PF00563 EAL domain C7R87_1609 PF07995 Glucose / Sorbosone dehydrogenase C7R87_1610 PF02586 SOS response associated peptidase (SRAP) C7R87_1611 PF01740 STAS domain C7R87_1611 PF00916 Sulfate permease family C7R87_1612 PF00082 Subtilase family C7R87_1612 PF05922 Peptidase inhibitor I9 C7R87_1614 PF00324 Amino acid permease C7R87_1615 PF00266 Aminotransferase class-V C7R87_1616 PF01037 Lrp/AsnC ligand binding domain C7R87_1621 PF13419 Haloacid dehalogenase-like hydrolase C7R87_1622 PF01479 S4 domain C7R87_1623 PF00154 recA bacterial DNA recombination protein C7R87_1624 PF02631 RecX family C7R87_1626 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_1626 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C7R87_1627 PF07977 FabA-like domain C7R87_1628 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_1628 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C7R87_1630 PF07244 Surface antigen variable number repeat C7R87_1630 PF01103 Surface antigen C7R87_1631 PF02163 Peptidase family M50 C7R87_1631 PF13180 PDZ domain C7R87_1631 PF17820 PDZ domain C7R87_1632 PF13288 DXP reductoisomerase C-terminal domain C7R87_1632 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C7R87_1632 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C7R87_1634 PF01255 Putative undecaprenyl diphosphate synthase C7R87_1635 PF01765 Ribosome recycling factor C7R87_1636 PF00696 Amino acid kinase family C7R87_1637 PF04055 Radical SAM superfamily C7R87_1637 PF18693 TRAM domain C7R87_1637 PF00919 Uncharacterized protein family UPF0004 C7R87_1639 PF00989 PAS fold C7R87_1639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_1639 PF00512 His Kinase A (phospho-acceptor) domain C7R87_1640 PF00158 Sigma-54 interaction domain C7R87_1640 PF02954 Bacterial regulatory protein, Fis family C7R87_1640 PF00072 Response regulator receiver domain C7R87_1641 PF00440 Bacterial regulatory proteins, tetR family C7R87_1642 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7R87_1642 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7R87_1644 PF02542 YgbB family C7R87_1646 PF01266 FAD dependent oxidoreductase C7R87_1650 PF10415 Fumarase C C-terminus C7R87_1650 PF00206 Lyase C7R87_1651 PF16363 GDP-mannose 4,6 dehydratase C7R87_1652 PF02635 DsrE/DsrF-like family C7R87_1656 PF00892 EamA-like transporter family C7R87_1657 PF00392 Bacterial regulatory proteins, gntR family C7R87_1657 PF00155 Aminotransferase class I and II C7R87_1658 PF01638 HxlR-like helix-turn-helix C7R87_1659 PF03453 MoeA N-terminal region (domain I and II) C7R87_1659 PF00994 Probable molybdopterin binding domain C7R87_1659 PF03454 MoeA C-terminal region (domain IV) C7R87_1660 PF00994 Probable molybdopterin binding domain C7R87_1660 PF01967 MoaC family C7R87_1661 PF02391 MoaE protein C7R87_1663 PF04055 Radical SAM superfamily C7R87_1663 PF06463 Molybdenum Cofactor Synthesis C C7R87_1664 PF01568 Molydopterin dinucleotide binding domain C7R87_1664 PF00384 Molybdopterin oxidoreductase C7R87_1664 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7R87_1665 PF12804 MobA-like NTP transferase domain C7R87_1666 PF00384 Molybdopterin oxidoreductase C7R87_1666 PF01568 Molydopterin dinucleotide binding domain C7R87_1666 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7R87_1666 PF04324 BFD-like [2Fe-2S] binding domain C7R87_1667 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_1667 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7R87_1667 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7R87_1667 PF04324 BFD-like [2Fe-2S] binding domain C7R87_1667 PF18267 Rubredoxin NAD+ reductase C-terminal domain C7R87_1668 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_1668 PF18267 Rubredoxin NAD+ reductase C-terminal domain C7R87_1668 PF04324 BFD-like [2Fe-2S] binding domain C7R87_1668 PF13806 Rieske-like [2Fe-2S] domain C7R87_1668 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7R87_1668 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7R87_1670 PF00486 Transcriptional regulatory protein, C terminal C7R87_1670 PF00072 Response regulator receiver domain C7R87_1671 PF00005 ABC transporter C7R87_1672 PF00817 impB/mucB/samB family C7R87_1672 PF11799 impB/mucB/samB family C-terminal domain C7R87_1672 PF13438 Domain of unknown function (DUF4113) C7R87_1673 PF01220 Dehydroquinase class II C7R87_1674 PF00364 Biotin-requiring enzyme C7R87_1675 PF02785 Biotin carboxylase C-terminal domain C7R87_1675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_1675 PF00289 Biotin carboxylase, N-terminal domain C7R87_1677 PF12832 MFS_1 like family C7R87_1695 PF02768 DNA polymerase III beta subunit, C-terminal domain C7R87_1695 PF00712 DNA polymerase III beta subunit, N-terminal domain C7R87_1695 PF02767 DNA polymerase III beta subunit, central domain C7R87_1751 PF13737 Transposase DDE domain C7R87_1765 PF01645 Conserved region in glutamate synthase C7R87_1768 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C7R87_1768 PF01565 FAD binding domain C7R87_1769 PF01451 Low molecular weight phosphotyrosine protein phosphatase C7R87_1771 PF00465 Iron-containing alcohol dehydrogenase C7R87_1772 PF03061 Thioesterase superfamily C7R87_1773 PF05506 Domain of unknown function (DUF756) C7R87_1773 PF04185 Phosphoesterase family C7R87_1774 PF12169 DNA polymerase III subunits gamma and tau domain III C7R87_1774 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C7R87_1774 PF12170 DNA polymerase III tau subunit V interacting with alpha C7R87_1775 PF07690 Major Facilitator Superfamily C7R87_1780 PF00108 Thiolase, N-terminal domain C7R87_1780 PF02803 Thiolase, C-terminal domain C7R87_1782 PF03466 LysR substrate binding domain C7R87_1782 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1784 PF01810 LysE type translocator C7R87_1785 PF01037 Lrp/AsnC ligand binding domain C7R87_1786 PF03594 Benzoate membrane transport protein C7R87_1787 PF02308 MgtC family C7R87_1788 PF00689 Cation transporting ATPase, C-terminus C7R87_1788 PF00690 Cation transporter/ATPase, N-terminus C7R87_1792 PF00582 Universal stress protein family C7R87_1793 PF00005 ABC transporter C7R87_1793 PF12848 ABC transporter C7R87_1794 PF13737 Transposase DDE domain C7R87_1795 PF13737 Transposase DDE domain C7R87_1798 PF00924 Mechanosensitive ion channel C7R87_1800 PF00593 TonB dependent receptor C7R87_1800 PF07715 TonB-dependent Receptor Plug Domain C7R87_1801 PF00440 Bacterial regulatory proteins, tetR family C7R87_1803 PF01037 Lrp/AsnC ligand binding domain C7R87_1804 PF01817 Chorismate mutase type II C7R87_1806 PF00106 short chain dehydrogenase C7R87_1808 PF11940 Domain of unknown function (DUF3458) Ig-like fold C7R87_1808 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C7R87_1808 PF01433 Peptidase family M1 domain C7R87_1811 PF02110 Hydroxyethylthiazole kinase family C7R87_1812 PF06445 GyrI-like small molecule binding domain C7R87_1814 PF14493 Helix-turn-helix domain C7R87_1814 PF05970 PIF1-like helicase C7R87_1815 PF00465 Iron-containing alcohol dehydrogenase C7R87_1818 PF00171 Aldehyde dehydrogenase family C7R87_1819 PF13520 Amino acid permease C7R87_1820 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C7R87_1821 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C7R87_1822 PF02540 NAD synthase C7R87_1822 PF00958 GMP synthase C terminal domain C7R87_1822 PF00117 Glutamine amidotransferase class-I C7R87_1823 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C7R87_1823 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7R87_1824 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7R87_1825 PF00149 Calcineurin-like phosphoesterase C7R87_1827 PF00881 Nitroreductase family C7R87_1829 PF17209 Hfq protein C7R87_1831 PF01119 DNA mismatch repair protein, C-terminal domain C7R87_1831 PF08676 MutL C terminal dimerisation domain C7R87_1832 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C7R87_1833 PF01479 S4 domain C7R87_1833 PF00849 RNA pseudouridylate synthase C7R87_1836 PF00849 RNA pseudouridylate synthase C7R87_1836 PF01479 S4 domain C7R87_1838 PF04284 Protein of unknown function (DUF441) C7R87_1839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1839 PF03466 LysR substrate binding domain C7R87_1842 PF07690 Major Facilitator Superfamily C7R87_1843 PF00520 Ion transport protein C7R87_1843 PF00027 Cyclic nucleotide-binding domain C7R87_1845 PF11791 Aconitate B N-terminal domain C7R87_1845 PF06434 Aconitate hydratase 2 N-terminus C7R87_1845 PF00330 Aconitase family (aconitate hydratase) C7R87_1846 PF13737 Transposase DDE domain C7R87_1849 PF17243 POTRA domain TamA domain 1 C7R87_1849 PF01103 Surface antigen C7R87_1849 PF07244 Surface antigen variable number repeat C7R87_1850 PF07690 Major Facilitator Superfamily C7R87_1851 PF03232 Ubiquinone biosynthesis protein COQ7 C7R87_1853 PF00120 Glutamine synthetase, catalytic domain C7R87_1854 PF00486 Transcriptional regulatory protein, C terminal C7R87_1854 PF00072 Response regulator receiver domain C7R87_1855 PF13493 Domain of unknown function (DUF4118) C7R87_1855 PF00512 His Kinase A (phospho-acceptor) domain C7R87_1855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_1855 PF02702 Osmosensitive K+ channel His kinase sensor domain C7R87_1856 PF02669 K+-transporting ATPase, c chain C7R87_1858 PF03814 Potassium-transporting ATPase A subunit C7R87_1861 PF03109 ABC1 family C7R87_1862 PF00899 ThiF family C7R87_1863 PF01613 Flavin reductase like domain C7R87_1864 PF00501 AMP-binding enzyme C7R87_1864 PF13193 AMP-binding enzyme C-terminal domain C7R87_1865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_1865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_1865 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_1866 PF00106 short chain dehydrogenase C7R87_1867 PF12833 Helix-turn-helix domain C7R87_1868 PF09084 NMT1/THI5 like C7R87_1869 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1870 PF17827 PrmC N-terminal domain C7R87_1870 PF13847 Methyltransferase domain C7R87_1871 PF03462 PCRF domain C7R87_1871 PF00472 RF-1 domain C7R87_1873 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1873 PF03466 LysR substrate binding domain C7R87_1876 PF00296 Luciferase-like monooxygenase C7R87_1878 PF13994 PgaD-like protein C7R87_1879 PF00535 Glycosyl transferase family 2 C7R87_1880 PF14883 Hypothetical glycosyl hydrolase family 13 C7R87_1880 PF01522 Polysaccharide deacetylase C7R87_1885 PF03618 Kinase/pyrophosphorylase C7R87_1886 PF00391 PEP-utilising enzyme, mobile domain C7R87_1886 PF02896 PEP-utilising enzyme, TIM barrel domain C7R87_1886 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C7R87_1888 PF06481 COX Aromatic Rich Motif C7R87_1888 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C7R87_1889 PF00115 Cytochrome C and Quinol oxidase polypeptide I C7R87_1890 PF00510 Cytochrome c oxidase subunit III C7R87_1891 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C7R87_1892 PF01040 UbiA prenyltransferase family C7R87_1893 PF01250 Ribosomal protein S6 C7R87_1894 PF01084 Ribosomal protein S18 C7R87_1895 PF01281 Ribosomal protein L9, N-terminal domain C7R87_1895 PF03948 Ribosomal protein L9, C-terminal domain C7R87_1896 PF00772 DnaB-like helicase N terminal domain C7R87_1896 PF03796 DnaB-like helicase C terminal domain C7R87_1897 PF00842 Alanine racemase, C-terminal domain C7R87_1897 PF01168 Alanine racemase, N-terminal domain C7R87_1899 PF01841 Transglutaminase-like superfamily C7R87_1899 PF08379 Bacterial transglutaminase-like N-terminal region C7R87_1901 PF14403 Circularly permuted ATP-grasp type 2 C7R87_1904 PF13932 GidA associated domain C7R87_1904 PF01134 Glucose inhibited division protein A C7R87_1908 PF02954 Bacterial regulatory protein, Fis family C7R87_1909 PF02142 MGS-like domain C7R87_1909 PF01808 AICARFT/IMPCHase bienzyme C7R87_1910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C7R87_1910 PF02843 Phosphoribosylglycinamide synthetase, C domain C7R87_1910 PF02844 Phosphoribosylglycinamide synthetase, N domain C7R87_1911 PF03180 NLPA lipoprotein C7R87_1912 PF09383 NIL domain C7R87_1912 PF00005 ABC transporter C7R87_1913 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_1914 PF00753 Metallo-beta-lactamase superfamily C7R87_1914 PF16123 Hydroxyacylglutathione hydrolase C-terminus C7R87_1918 PF00375 Sodium:dicarboxylate symporter family C7R87_1922 PF07995 Glucose / Sorbosone dehydrogenase C7R87_1923 PF00892 EamA-like transporter family C7R87_1924 PF01177 Asp/Glu/Hydantoin racemase C7R87_1928 PF02470 MlaD protein C7R87_1929 PF04403 Paraquat-inducible protein A C7R87_1932 PF13737 Transposase DDE domain C7R87_1933 PF02080 TrkA-C domain C7R87_1933 PF06826 Predicted Permease Membrane Region C7R87_1934 PF00155 Aminotransferase class I and II C7R87_1937 PF08946 Osmosensory transporter coiled coil C7R87_1937 PF00083 Sugar (and other) transporter C7R87_1944 PF13737 Transposase DDE domain C7R87_1948 PF00392 Bacterial regulatory proteins, gntR family C7R87_1948 PF07729 FCD domain C7R87_1950 PF03616 Sodium/glutamate symporter C7R87_1951 PF00561 alpha/beta hydrolase fold C7R87_1956 PF04076 Bacterial OB fold (BOF) protein C7R87_1962 PF00324 Amino acid permease C7R87_1963 PF00171 Aldehyde dehydrogenase family C7R87_1964 PF00202 Aminotransferase class-III C7R87_1965 PF03466 LysR substrate binding domain C7R87_1965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_1970 PF00069 Protein kinase domain C7R87_1974 PF00814 Glycoprotease family C7R87_1975 PF01165 Ribosomal protein S21 C7R87_1976 PF09424 Yqey-like protein C7R87_1977 PF01435 Peptidase family M48 C7R87_1978 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7R87_1978 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7R87_1981 PF00156 Phosphoribosyl transferase domain C7R87_1983 PF01180 Dihydroorotate dehydrogenase C7R87_1987 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C7R87_1987 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C7R87_1988 PF00881 Nitroreductase family C7R87_1990 PF00270 DEAD/DEAH box helicase C7R87_1990 PF00271 Helicase conserved C-terminal domain C7R87_1991 PF00313 'Cold-shock' DNA-binding domain C7R87_1993 PF04542 Sigma-70 region 2 C7R87_1993 PF00140 Sigma-70 factor, region 1.2 C7R87_1993 PF04545 Sigma-70, region 4 C7R87_1994 PF04241 Protein of unknown function (DUF423) C7R87_1996 PF05690 Thiazole biosynthesis protein ThiG C7R87_1998 PF03883 Peroxide stress protein YaaA C7R87_2000 PF12706 Beta-lactamase superfamily domain C7R87_2001 PF07687 Peptidase dimerisation domain C7R87_2001 PF01546 Peptidase family M20/M25/M40 C7R87_2003 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7R87_2004 PF01842 ACT domain C7R87_2004 PF00800 Prephenate dehydratase C7R87_2004 PF01817 Chorismate mutase type II C7R87_2005 PF00756 Putative esterase C7R87_2006 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_2006 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_2006 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_2007 PF00375 Sodium:dicarboxylate symporter family C7R87_2008 PF02885 Glycosyl transferase family, helical bundle domain C7R87_2008 PF00591 Glycosyl transferase family, a/b domain C7R87_2009 PF07023 Protein of unknown function (DUF1315) C7R87_2010 PF01513 ATP-NAD kinase C7R87_2011 PF00905 Penicillin binding protein transpeptidase domain C7R87_2011 PF00912 Transglycosylase C7R87_2011 PF14814 Bifunctional transglycosylase second domain C7R87_2013 PF00293 NUDIX domain C7R87_2015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2015 PF00512 His Kinase A (phospho-acceptor) domain C7R87_2015 PF08521 Two-component sensor kinase N-terminal C7R87_2016 PF00072 Response regulator receiver domain C7R87_2016 PF00486 Transcriptional regulatory protein, C terminal C7R87_2018 PF00437 Type II/IV secretion system protein C7R87_2020 PF18389 TrmO C-terminal domain C7R87_2020 PF01980 tRNA-methyltransferase O C7R87_2021 PF00175 Oxidoreductase NAD-binding domain C7R87_2021 PF00970 Oxidoreductase FAD-binding domain C7R87_2022 PF02567 Phenazine biosynthesis-like protein C7R87_2023 PF00392 Bacterial regulatory proteins, gntR family C7R87_2023 PF00155 Aminotransferase class I and II C7R87_2025 PF00037 4Fe-4S binding domain C7R87_2026 PF00893 Small Multidrug Resistance protein C7R87_2027 PF00005 ABC transporter C7R87_2028 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_2029 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_2030 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7R87_2031 PF03466 LysR substrate binding domain C7R87_2031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2032 PF13533 Biotin-lipoyl like C7R87_2033 PF00873 AcrB/AcrD/AcrF family C7R87_2034 PF02321 Outer membrane efflux protein C7R87_2035 PF00464 Serine hydroxymethyltransferase C7R87_2041 PF00005 ABC transporter C7R87_2042 PF01061 ABC-2 type transporter C7R87_2043 PF14489 QueF-like protein C7R87_2043 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C7R87_2045 PF01098 Cell cycle protein C7R87_2046 PF13406 Transglycosylase SLT domain C7R87_2047 PF05036 Sporulation related domain C7R87_2047 PF03330 Lytic transglycolase C7R87_2050 PF12833 Helix-turn-helix domain C7R87_2052 PF00889 Elongation factor TS C7R87_2053 PF00318 Ribosomal protein S2 C7R87_2054 PF00557 Metallopeptidase family M24 C7R87_2056 PF07690 Major Facilitator Superfamily C7R87_2059 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_2059 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7R87_2060 PF04055 Radical SAM superfamily C7R87_2061 PF09317 Domain of unknown function (DUF1974) C7R87_2061 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_2061 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_2064 PF05221 S-adenosyl-L-homocysteine hydrolase C7R87_2064 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C7R87_2065 PF02219 Methylenetetrahydrofolate reductase C7R87_2066 PF04452 RNA methyltransferase C7R87_2067 PF00563 EAL domain C7R87_2067 PF03707 Bacterial signalling protein N terminal repeat C7R87_2067 PF00990 Diguanylate cyclase, GGDEF domain C7R87_2068 PF00390 Malic enzyme, N-terminal domain C7R87_2068 PF03949 Malic enzyme, NAD binding domain C7R87_2068 PF01515 Phosphate acetyl/butaryl transferase C7R87_2069 PF12627 Probable RNA and SrmB- binding site of polymerase A C7R87_2069 PF01743 Poly A polymerase head domain C7R87_2070 PF13180 PDZ domain C7R87_2071 PF01784 NIF3 (NGG1p interacting factor 3) C7R87_2072 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C7R87_2072 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C7R87_2079 PF01040 UbiA prenyltransferase family C7R87_2080 PF04345 Chorismate lyase C7R87_2082 PF00854 POT family C7R87_2084 PF13737 Transposase DDE domain C7R87_2085 PF01476 LysM domain C7R87_2085 PF08525 Opacity-associated protein A N-terminal motif C7R87_2085 PF01551 Peptidase family M23 C7R87_2121 PF00665 Integrase core domain C7R87_2121 PF13333 Integrase core domain C7R87_2121 PF13276 HTH-like domain C7R87_2122 PF01527 Transposase C7R87_2155 PF01812 5-formyltetrahydrofolate cyclo-ligase family C7R87_2157 PF13018 Extended Signal Peptide of Type V secretion system C7R87_2157 PF05658 Head domain of trimeric autotransporter adhesin C7R87_2157 PF03895 YadA-like membrane anchor domain C7R87_2157 PF05662 Coiled stalk of trimeric autotransporter adhesin C7R87_2158 PF05362 Lon protease (S16) C-terminal proteolytic domain C7R87_2158 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_2158 PF02190 ATP-dependent protease La (LON) substrate-binding domain C7R87_2159 PF02590 Predicted SPOUT methyltransferase C7R87_2160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C7R87_2162 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7R87_2162 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C7R87_2163 PF04060 Putative Fe-S cluster C7R87_2164 PF00730 HhH-GPD superfamily base excision DNA repair protein C7R87_2164 PF10576 Iron-sulfur binding domain of endonuclease III C7R87_2164 PF00633 Helix-hairpin-helix motif C7R87_2166 PF05191 Adenylate kinase, active site lid C7R87_2169 PF00905 Penicillin binding protein transpeptidase domain C7R87_2169 PF03717 Penicillin-binding Protein dimerisation domain C7R87_2172 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7R87_2173 PF01730 UreF C7R87_2174 PF05194 UreE urease accessory protein, C-terminal domain C7R87_2174 PF02814 UreE urease accessory protein, N-terminal domain C7R87_2175 PF00449 Urease alpha-subunit, N-terminal domain C7R87_2175 PF01979 Amidohydrolase family C7R87_2176 PF00699 Urease beta subunit C7R87_2177 PF00547 Urease, gamma subunit C7R87_2178 PF01774 UreD urease accessory protein C7R87_2182 PF00463 Isocitrate lyase family C7R87_2183 PF03466 LysR substrate binding domain C7R87_2183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2184 PF01595 Cyclin M transmembrane N-terminal domain C7R87_2184 PF03471 Transporter associated domain C7R87_2184 PF00571 CBS domain C7R87_2185 PF13737 Transposase DDE domain C7R87_2188 PF00009 Elongation factor Tu GTP binding domain C7R87_2189 PF01507 Phosphoadenosine phosphosulfate reductase family C7R87_2191 PF14052 Capsule assembly protein Wzi C7R87_2192 PF01336 OB-fold nucleic acid binding domain C7R87_2192 PF00152 tRNA synthetases class II (D, K and N) C7R87_2195 PF00301 Rubredoxin C7R87_2196 PF18113 Rubredoxin binding C-terminal domain C7R87_2196 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_2197 PF00561 alpha/beta hydrolase fold C7R87_2198 PF03466 LysR substrate binding domain C7R87_2198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2200 PF13090 Polyphosphate kinase C-terminal domain 2 C7R87_2200 PF17941 Polyphosphate kinase C-terminal domain 1 C7R87_2200 PF13089 Polyphosphate kinase N-terminal domain C7R87_2200 PF02503 Polyphosphate kinase middle domain C7R87_2201 PF00912 Transglycosylase C7R87_2202 PF01694 Rhomboid family C7R87_2204 PF00005 ABC transporter C7R87_2205 PF13472 GDSL-like Lipase/Acylhydrolase family C7R87_2206 PF00484 Carbonic anhydrase C7R87_2207 PF00561 alpha/beta hydrolase fold C7R87_2209 PF00593 TonB dependent receptor C7R87_2209 PF07715 TonB-dependent Receptor Plug Domain C7R87_2210 PF01521 Iron-sulphur cluster biosynthesis C7R87_2210 PF01106 NifU-like domain C7R87_2212 PF00884 Sulfatase C7R87_2213 PF03781 Sulfatase-modifying factor enzyme 1 C7R87_2216 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_2217 PF01384 Phosphate transporter family C7R87_2219 PF02965 Vitamin B12 dependent methionine synthase, activation domain C7R87_2219 PF02310 B12 binding domain C7R87_2219 PF02607 B12 binding domain C7R87_2219 PF00809 Pterin binding enzyme C7R87_2219 PF02574 Homocysteine S-methyltransferase C7R87_2220 PF02779 Transketolase, pyrimidine binding domain C7R87_2220 PF02780 Transketolase, C-terminal domain C7R87_2221 PF00456 Transketolase, thiamine diphosphate binding domain C7R87_2222 PF07690 Major Facilitator Superfamily C7R87_2224 PF03466 LysR substrate binding domain C7R87_2224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2226 PF01263 Aldose 1-epimerase C7R87_2227 PF07690 Major Facilitator Superfamily C7R87_2228 PF02311 AraC-like ligand binding domain C7R87_2228 PF12833 Helix-turn-helix domain C7R87_2229 PF04960 Glutaminase C7R87_2230 PF01327 Polypeptide deformylase C7R87_2232 PF07690 Major Facilitator Superfamily C7R87_2234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7R87_2234 PF00205 Thiamine pyrophosphate enzyme, central domain C7R87_2234 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7R87_2235 PF00171 Aldehyde dehydrogenase family C7R87_2236 PF01958 Domain of unknown function DUF108 C7R87_2236 PF03447 Homoserine dehydrogenase, NAD binding domain C7R87_2238 PF12697 Alpha/beta hydrolase family C7R87_2240 PF07690 Major Facilitator Superfamily C7R87_2241 PF14759 Reductase C-terminal C7R87_2241 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_2242 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7R87_2244 PF00355 Rieske [2Fe-2S] domain C7R87_2246 PF00355 Rieske [2Fe-2S] domain C7R87_2247 PF01614 Bacterial transcriptional regulator C7R87_2247 PF09339 IclR helix-turn-helix domain C7R87_2250 PF00378 Enoyl-CoA hydratase/isomerase C7R87_2252 PF00535 Glycosyl transferase family 2 C7R87_2253 PF14883 Hypothetical glycosyl hydrolase family 13 C7R87_2253 PF01522 Polysaccharide deacetylase C7R87_2254 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_2255 PF07152 YaeQ protein C7R87_2256 PF00375 Sodium:dicarboxylate symporter family C7R87_2257 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7R87_2257 PF07683 Cobalamin synthesis protein cobW C-terminal domain C7R87_2259 PF03061 Thioesterase superfamily C7R87_2261 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_2262 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_2263 PF13977 BetI-type transcriptional repressor, C-terminal C7R87_2263 PF00440 Bacterial regulatory proteins, tetR family C7R87_2264 PF00171 Aldehyde dehydrogenase family C7R87_2265 PF05199 GMC oxidoreductase C7R87_2265 PF00732 GMC oxidoreductase C7R87_2266 PF06039 Malate:quinone oxidoreductase (Mqo) C7R87_2268 PF02574 Homocysteine S-methyltransferase C7R87_2269 PF13520 Amino acid permease C7R87_2274 PF01126 Heme oxygenase C7R87_2278 PF00593 TonB dependent receptor C7R87_2278 PF07715 TonB-dependent Receptor Plug Domain C7R87_2280 PF08281 Sigma-70, region 4 C7R87_2280 PF04542 Sigma-70 region 2 C7R87_2282 PF00701 Dihydrodipicolinate synthetase family C7R87_2283 PF00083 Sugar (and other) transporter C7R87_2285 PF13737 Transposase DDE domain C7R87_2297 PF01464 Transglycosylase SLT domain C7R87_2297 PF10145 Phage-related minor tail protein C7R87_2297 PF01551 Peptidase family M23 C7R87_2300 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system C7R87_2319 PF01527 Transposase C7R87_2320 PF13333 Integrase core domain C7R87_2320 PF13276 HTH-like domain C7R87_2320 PF00665 Integrase core domain C7R87_2338 PF01555 DNA methylase C7R87_2343 PF12161 HsdM N-terminal domain C7R87_2343 PF02384 N-6 DNA Methylase C7R87_2355 PF07690 Major Facilitator Superfamily C7R87_2356 PF13533 Biotin-lipoyl like C7R87_2357 PF03061 Thioesterase superfamily C7R87_2358 PF00490 Delta-aminolevulinic acid dehydratase C7R87_2359 PF01266 FAD dependent oxidoreductase C7R87_2360 PF01370 NAD dependent epimerase/dehydratase family C7R87_2360 PF08338 Domain of unknown function (DUF1731) C7R87_2364 PF12320 Type 5 capsule protein repressor C-terminal domain C7R87_2364 PF00149 Calcineurin-like phosphoesterase C7R87_2366 PF01168 Alanine racemase, N-terminal domain C7R87_2367 PF00437 Type II/IV secretion system protein C7R87_2368 PF00437 Type II/IV secretion system protein C7R87_2369 PF01475 Ferric uptake regulator family C7R87_2370 PF04355 SmpA / OmlA family C7R87_2371 PF03658 RnfH family Ubiquitin C7R87_2373 PF01814 Hemerythrin HHE cation binding domain C7R87_2374 PF13230 Glutamine amidotransferases class-II C7R87_2376 PF00696 Amino acid kinase family C7R87_2377 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7R87_2377 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7R87_2377 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7R87_2377 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7R87_2378 PF00692 dUTPase C7R87_2379 PF13361 UvrD-like helicase C-terminal domain C7R87_2379 PF00580 UvrD/REP helicase N-terminal domain C7R87_2380 PF13488 Glycine zipper C7R87_2380 PF00691 OmpA family C7R87_2381 PF01553 Acyltransferase C7R87_2383 PF03775 Septum formation inhibitor MinC, C-terminal domain C7R87_2384 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C7R87_2385 PF03776 Septum formation topological specificity factor MinE C7R87_2389 PF01810 LysE type translocator C7R87_2390 PF01580 FtsK/SpoIIIE family C7R87_2390 PF09397 Ftsk gamma domain C7R87_2390 PF17854 FtsK alpha domain C7R87_2390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C7R87_2391 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_2394 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C7R87_2395 PF04376 Arginine-tRNA-protein transferase, N terminus C7R87_2395 PF04377 Arginine-tRNA-protein transferase, C terminus C7R87_2396 PF00583 Acetyltransferase (GNAT) family C7R87_2399 PF00009 Elongation factor Tu GTP binding domain C7R87_2399 PF03144 Elongation factor Tu domain 2 C7R87_2399 PF03143 Elongation factor Tu C-terminal domain C7R87_2400 PF00009 Elongation factor Tu GTP binding domain C7R87_2400 PF03144 Elongation factor Tu domain 2 C7R87_2400 PF14492 Elongation Factor G, domain II C7R87_2400 PF00679 Elongation factor G C-terminus C7R87_2400 PF03764 Elongation factor G, domain IV C7R87_2401 PF00177 Ribosomal protein S7p/S5e C7R87_2402 PF00164 Ribosomal protein S12/S23 C7R87_2404 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_2404 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_2406 PF02678 Pirin C7R87_2406 PF05726 Pirin C-terminal cupin domain C7R87_2408 PF02540 NAD synthase C7R87_2408 PF00795 Carbon-nitrogen hydrolase C7R87_2411 PF00970 Oxidoreductase FAD-binding domain C7R87_2411 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_2411 PF00175 Oxidoreductase NAD-binding domain C7R87_2412 PF00171 Aldehyde dehydrogenase family C7R87_2413 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C7R87_2413 PF00355 Rieske [2Fe-2S] domain C7R87_2414 PF07859 alpha/beta hydrolase fold C7R87_2415 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_2416 PF00180 Isocitrate/isopropylmalate dehydrogenase C7R87_2417 PF03466 LysR substrate binding domain C7R87_2417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2420 PF00037 4Fe-4S binding domain C7R87_2421 PF01467 Cytidylyltransferase-like C7R87_2422 PF01668 SmpB protein C7R87_2423 PF03358 NADPH-dependent FMN reductase C7R87_2425 PF00849 RNA pseudouridylate synthase C7R87_2425 PF01479 S4 domain C7R87_2426 PF13525 Outer membrane lipoprotein C7R87_2427 PF01807 CHC2 zinc finger C7R87_2427 PF08278 DNA primase DnaG DnaB-binding C7R87_2427 PF10410 DnaB-helicase binding domain of primase C7R87_2427 PF08275 DNA primase catalytic core, N-terminal domain C7R87_2428 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C7R87_2428 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C7R87_2428 PF01488 Shikimate / quinate 5-dehydrogenase C7R87_2430 PF03550 Outer membrane lipoprotein LolB C7R87_2431 PF00288 GHMP kinases N terminal domain C7R87_2431 PF08544 GHMP kinases C terminal C7R87_2435 PF14572 Phosphoribosyl synthetase-associated domain C7R87_2435 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C7R87_2436 PF01386 Ribosomal L25p family C7R87_2437 PF01195 Peptidyl-tRNA hydrolase C7R87_2438 PF02261 Aspartate decarboxylase C7R87_2441 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C7R87_2443 PF03070 TENA/THI-4/PQQC family C7R87_2443 PF02581 Thiamine monophosphate synthase C7R87_2443 PF08543 Phosphomethylpyrimidine kinase C7R87_2444 PF01476 LysM domain C7R87_2444 PF04972 BON domain C7R87_2445 PF00550 Phosphopantetheine attachment site C7R87_2447 PF00698 Acyl transferase domain C7R87_2448 PF01783 Ribosomal L32p protein family C7R87_2449 PF02620 Large ribosomal RNA subunit accumulation protein YceD C7R87_2450 PF04315 Elongation factor P hydroxylase C7R87_2451 PF01300 Telomere recombination C7R87_2452 PF02616 Segregation and condensation protein ScpA C7R87_2453 PF04079 Segregation and condensation complex subunit ScpB C7R87_2454 PF01479 S4 domain C7R87_2454 PF00849 RNA pseudouridylate synthase C7R87_2457 PF00155 Aminotransferase class I and II C7R87_2458 PF00202 Aminotransferase class-III C7R87_2458 PF06968 Biotin and Thiamin Synthesis associated domain C7R87_2458 PF04055 Radical SAM superfamily C7R87_2459 PF08241 Methyltransferase domain C7R87_2459 PF12697 Alpha/beta hydrolase family C7R87_2461 PF13936 Helix-turn-helix domain C7R87_2461 PF00665 Integrase core domain C7R87_2462 PF02358 Trehalose-phosphatase C7R87_2463 PF00982 Glycosyltransferase family 20 C7R87_2464 PF07690 Major Facilitator Superfamily C7R87_2465 PF00210 Ferritin-like domain C7R87_2466 PF01653 NAD-dependent DNA ligase adenylation domain C7R87_2466 PF03120 NAD-dependent DNA ligase OB-fold domain C7R87_2466 PF12826 Helix-hairpin-helix motif C7R87_2466 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C7R87_2466 PF00533 BRCA1 C Terminus (BRCT) domain C7R87_2468 PF02463 RecF/RecN/SMC N terminal domain C7R87_2468 PF06470 SMC proteins Flexible Hinge Domain C7R87_2470 PF01925 Sulfite exporter TauE/SafE C7R87_2472 PF03309 Type III pantothenate kinase C7R87_2473 PF00448 SRP54-type protein, GTPase domain C7R87_2473 PF02881 SRP54-type protein, helical bundle domain C7R87_2473 PF02978 Signal peptide binding domain C7R87_2475 PF01207 Dihydrouridine synthase (Dus) C7R87_2481 PF00692 dUTPase C7R87_2484 PF01048 Phosphorylase superfamily C7R87_2485 PF10609 NUBPL iron-transfer P-loop NTPase C7R87_2487 PF09334 tRNA synthetases class I (M) C7R87_2487 PF01588 Putative tRNA binding domain C7R87_2492 PF13533 Biotin-lipoyl like C7R87_2493 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_2496 PF05552 Conserved TM helix C7R87_2499 PF00175 Oxidoreductase NAD-binding domain C7R87_2499 PF00970 Oxidoreductase FAD-binding domain C7R87_2500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2500 PF03466 LysR substrate binding domain C7R87_2501 PF00313 'Cold-shock' DNA-binding domain C7R87_2503 PF00361 Proton-conducting membrane transporter C7R87_2504 PF00361 Proton-conducting membrane transporter C7R87_2505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C7R87_2505 PF00361 Proton-conducting membrane transporter C7R87_2506 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C7R87_2507 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C7R87_2508 PF12838 4Fe-4S dicluster domain C7R87_2509 PF00146 NADH dehydrogenase C7R87_2510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7R87_2510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7R87_2510 PF00384 Molybdopterin oxidoreductase C7R87_2511 PF10531 SLBB domain C7R87_2511 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C7R87_2511 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C7R87_2513 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C7R87_2513 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C7R87_2514 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C7R87_2515 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C7R87_2516 PF00990 Diguanylate cyclase, GGDEF domain C7R87_2516 PF17151 Periplasmic sensor domain C7R87_2518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2518 PF00512 His Kinase A (phospho-acceptor) domain C7R87_2518 PF00672 HAMP domain C7R87_2519 PF00486 Transcriptional regulatory protein, C terminal C7R87_2519 PF00072 Response regulator receiver domain C7R87_2520 PF03477 ATP cone domain C7R87_2520 PF02867 Ribonucleotide reductase, barrel domain C7R87_2520 PF00317 Ribonucleotide reductase, all-alpha domain C7R87_2522 PF00268 Ribonucleotide reductase, small chain C7R87_2524 PF00672 HAMP domain C7R87_2524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2524 PF13755 Sensor N-terminal transmembrane domain C7R87_2524 PF13756 Stimulus-sensing domain C7R87_2524 PF00512 His Kinase A (phospho-acceptor) domain C7R87_2525 PF00665 Integrase core domain C7R87_2525 PF13936 Helix-turn-helix domain C7R87_2527 PF00665 Integrase core domain C7R87_2527 PF13936 Helix-turn-helix domain C7R87_2540 PF13360 PQQ-like domain C7R87_2540 PF01011 PQQ enzyme repeat C7R87_2544 PF02567 Phenazine biosynthesis-like protein C7R87_2548 PF01613 Flavin reductase like domain C7R87_2549 PF08267 Cobalamin-independent synthase, N-terminal domain C7R87_2549 PF01717 Cobalamin-independent synthase, Catalytic domain C7R87_2551 PF03466 LysR substrate binding domain C7R87_2551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2552 PF01810 LysE type translocator C7R87_2554 PF12833 Helix-turn-helix domain C7R87_2554 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C7R87_2555 PF01546 Peptidase family M20/M25/M40 C7R87_2555 PF07687 Peptidase dimerisation domain C7R87_2557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2557 PF03466 LysR substrate binding domain C7R87_2558 PF07690 Major Facilitator Superfamily C7R87_2560 PF03466 LysR substrate binding domain C7R87_2560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2561 PF00890 FAD binding domain C7R87_2561 PF14537 Cytochrome c3 C7R87_2563 PF02515 CoA-transferase family III C7R87_2564 PF07690 Major Facilitator Superfamily C7R87_2565 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_2565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_2565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_2566 PF03466 LysR substrate binding domain C7R87_2566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2567 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_2567 PF00107 Zinc-binding dehydrogenase C7R87_2568 PF00962 Adenosine/AMP deaminase C7R87_2573 PF02445 Quinolinate synthetase A protein C7R87_2574 PF01960 ArgJ family C7R87_2575 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7R87_2575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7R87_2576 PF00893 Small Multidrug Resistance protein C7R87_2578 PF05275 Copper resistance protein B precursor (CopB) C7R87_2579 PF07732 Multicopper oxidase C7R87_2579 PF07731 Multicopper oxidase C7R87_2579 PF00394 Multicopper oxidase C7R87_2582 PF00834 Ribulose-phosphate 3 epimerase family C7R87_2584 PF00756 Putative esterase C7R87_2586 PF04445 Putative SAM-dependent methyltransferase C7R87_2587 PF00814 Glycoprotease family C7R87_2588 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_2589 PF00293 NUDIX domain C7R87_2594 PF13737 Transposase DDE domain C7R87_2596 PF00425 chorismate binding enzyme C7R87_2596 PF04715 Anthranilate synthase component I, N terminal region C7R87_2597 PF00155 Aminotransferase class I and II C7R87_2598 PF00815 Histidinol dehydrogenase C7R87_2599 PF01634 ATP phosphoribosyltransferase C7R87_2600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7R87_2601 PF01722 BolA-like protein C7R87_2602 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C7R87_2603 PF00309 Sigma-54 factor, Activator interacting domain (AID) C7R87_2603 PF04963 Sigma-54 factor, core binding domain C7R87_2603 PF04552 Sigma-54, DNA binding domain C7R87_2612 PF00795 Carbon-nitrogen hydrolase C7R87_2614 PF01047 MarR family C7R87_2615 PF02566 OsmC-like protein C7R87_2616 PF00437 Type II/IV secretion system protein C7R87_2620 PF01367 5'-3' exonuclease, C-terminal SAM fold C7R87_2620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C7R87_2620 PF00476 DNA polymerase family A C7R87_2620 PF01612 3'-5' exonuclease C7R87_2621 PF02325 YGGT family C7R87_2622 PF03807 NADP oxidoreductase coenzyme F420-dependent C7R87_2622 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7R87_2623 PF01171 PP-loop family C7R87_2623 PF11734 TilS substrate C-terminal domain C7R87_2623 PF09179 TilS substrate binding domain C7R87_2624 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C7R87_2625 PF02541 Ppx/GppA phosphatase family C7R87_2626 PF00085 Thioredoxin C7R87_2627 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7R87_2627 PF07498 Rho termination factor, N-terminal domain C7R87_2627 PF07497 Rho termination factor, RNA-binding domain C7R87_2630 PF00216 Bacterial DNA-binding protein C7R87_2631 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C7R87_2631 PF01588 Putative tRNA binding domain C7R87_2631 PF03483 B3/4 domain C7R87_2631 PF03484 tRNA synthetase B5 domain C7R87_2631 PF03147 Ferredoxin-fold anticodon binding domain C7R87_2632 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C7R87_2632 PF01409 tRNA synthetases class II core domain (F) C7R87_2636 PF00453 Ribosomal protein L20 C7R87_2637 PF01632 Ribosomal protein L35 C7R87_2638 PF07690 Major Facilitator Superfamily C7R87_2639 PF09335 SNARE associated Golgi protein C7R87_2640 PF00043 Glutathione S-transferase, C-terminal domain C7R87_2640 PF02798 Glutathione S-transferase, N-terminal domain C7R87_2641 PF00707 Translation initiation factor IF-3, C-terminal domain C7R87_2641 PF05198 Translation initiation factor IF-3, N-terminal domain C7R87_2642 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7R87_2642 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7R87_2642 PF03129 Anticodon binding domain C7R87_2642 PF02824 TGS domain C7R87_2643 PF00501 AMP-binding enzyme C7R87_2643 PF13193 AMP-binding enzyme C-terminal domain C7R87_2644 PF04751 Protein of unknown function (DUF615) C7R87_2645 PF00381 PTS HPr component phosphorylation site C7R87_2646 PF03668 P-loop ATPase protein family C7R87_2647 PF02569 Pantoate-beta-alanine ligase C7R87_2648 PF02548 Ketopantoate hydroxymethyltransferase C7R87_2649 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C7R87_2650 PF01743 Poly A polymerase head domain C7R87_2650 PF12627 Probable RNA and SrmB- binding site of polymerase A C7R87_2650 PF12626 Polymerase A arginine-rich C-terminus C7R87_2652 PF03819 MazG nucleotide pyrophosphohydrolase domain C7R87_2654 PF04607 Region found in RelA / SpoT proteins C7R87_2654 PF02824 TGS domain C7R87_2654 PF13291 ACT domain C7R87_2655 PF05958 tRNA (Uracil-5-)-methyltransferase C7R87_2657 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_2658 PF00672 HAMP domain C7R87_2658 PF00512 His Kinase A (phospho-acceptor) domain C7R87_2658 PF00072 Response regulator receiver domain C7R87_2658 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C7R87_2658 PF01627 Hpt domain C7R87_2658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2659 PF00378 Enoyl-CoA hydratase/isomerase C7R87_2660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7R87_2660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7R87_2661 PF01261 Xylose isomerase-like TIM barrel C7R87_2663 PF00106 short chain dehydrogenase C7R87_2664 PF02233 NAD(P) transhydrogenase beta subunit C7R87_2665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C7R87_2666 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C7R87_2666 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C7R87_2667 PF00892 EamA-like transporter family C7R87_2669 PF07690 Major Facilitator Superfamily C7R87_2670 PF01207 Dihydrouridine synthase (Dus) C7R87_2672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2672 PF03466 LysR substrate binding domain C7R87_2674 PF00899 ThiF family C7R87_2676 PF00330 Aconitase family (aconitate hydratase) C7R87_2676 PF00694 Aconitase C-terminal domain C7R87_2677 PF01026 TatD related DNase C7R87_2680 PF16658 Class II release factor RF3, C-terminal domain C7R87_2680 PF03144 Elongation factor Tu domain 2 C7R87_2680 PF00009 Elongation factor Tu GTP binding domain C7R87_2684 PF00990 Diguanylate cyclase, GGDEF domain C7R87_2684 PF00563 EAL domain C7R87_2684 PF03707 Bacterial signalling protein N terminal repeat C7R87_2685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C7R87_2685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C7R87_2686 PF10369 Small subunit of acetolactate synthase C7R87_2687 PF00205 Thiamine pyrophosphate enzyme, central domain C7R87_2687 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7R87_2687 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7R87_2689 PF09334 tRNA synthetases class I (M) C7R87_2689 PF00133 tRNA synthetases class I (I, L, M and V) C7R87_2689 PF08264 Anticodon-binding domain of tRNA C7R87_2689 PF13603 Leucyl-tRNA synthetase, Domain 2 C7R87_2692 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_2693 PF01527 Transposase C7R87_2694 PF00665 Integrase core domain C7R87_2694 PF13276 HTH-like domain C7R87_2694 PF13333 Integrase core domain C7R87_2695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_2696 PF00005 ABC transporter C7R87_2696 PF02687 FtsX-like permease family C7R87_2696 PF12704 MacB-like periplasmic core domain C7R87_2697 PF02321 Outer membrane efflux protein C7R87_2700 PF00929 Exonuclease C7R87_2701 PF03193 RsgA GTPase C7R87_2703 PF00462 Glutaredoxin C7R87_2704 PF02556 Preprotein translocase subunit SecB C7R87_2707 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_2707 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_2710 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_2710 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_2712 PF04820 Tryptophan halogenase C7R87_2716 PF00221 Aromatic amino acid lyase C7R87_2720 PF13193 AMP-binding enzyme C-terminal domain C7R87_2720 PF00501 AMP-binding enzyme C7R87_2722 PF00550 Phosphopantetheine attachment site C7R87_2723 PF00550 Phosphopantetheine attachment site C7R87_2726 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C7R87_2726 PF01926 50S ribosome-binding GTPase C7R87_2727 PF13360 PQQ-like domain C7R87_2729 PF13393 Histidyl-tRNA synthetase C7R87_2729 PF03129 Anticodon binding domain C7R87_2730 PF04551 GcpE protein C7R87_2731 PF13464 Domain of unknown function (DUF4115) C7R87_2733 PF04055 Radical SAM superfamily C7R87_2734 PF00334 Nucleoside diphosphate kinase C7R87_2735 PF04384 Iron-sulphur cluster assembly C7R87_2736 PF01569 PAP2 superfamily C7R87_2737 PF00534 Glycosyl transferases group 1 C7R87_2737 PF13439 Glycosyltransferase Family 4 C7R87_2738 PF17804 Tail specific protease N-terminal domain C7R87_2738 PF03572 Peptidase family S41 C7R87_2738 PF11818 C-terminal domain of tail specific protease (DUF3340) C7R87_2738 PF00595 PDZ domain C7R87_2739 PF00933 Glycosyl hydrolase family 3 N terminal domain C7R87_2741 PF00561 alpha/beta hydrolase fold C7R87_2742 PF00171 Aldehyde dehydrogenase family C7R87_2743 PF00171 Aldehyde dehydrogenase family C7R87_2744 PF01202 Shikimate kinase C7R87_2745 PF02447 GntP family permease C7R87_2746 PF01081 KDPG and KHG aldolase C7R87_2747 PF00920 Dehydratase family C7R87_2748 PF00871 Acetokinase family C7R87_2749 PF07085 DRTGG domain C7R87_2749 PF01515 Phosphate acetyl/butaryl transferase C7R87_2750 PF05683 Fumarase C-terminus C7R87_2750 PF05681 Fumarate hydratase (Fumerase) C7R87_2753 PF07724 AAA domain (Cdc48 subfamily) C7R87_2753 PF10431 C-terminal, D2-small domain, of ClpB protein C7R87_2753 PF06689 ClpX C4-type zinc finger C7R87_2754 PF00574 Clp protease C7R87_2755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_2755 PF05697 Bacterial trigger factor protein (TF) C7R87_2755 PF05698 Bacterial trigger factor protein (TF) C-terminus C7R87_2756 PF07715 TonB-dependent Receptor Plug Domain C7R87_2756 PF00593 TonB dependent receptor C7R87_2757 PF13640 2OG-Fe(II) oxygenase superfamily C7R87_2757 PF18331 PKHD-type hydroxylase C-terminal domain C7R87_2758 PF08502 LeuA allosteric (dimerisation) domain C7R87_2758 PF00682 HMGL-like C7R87_2759 PF00561 alpha/beta hydrolase fold C7R87_2760 PF00561 alpha/beta hydrolase fold C7R87_2760 PF07021 Methionine biosynthesis protein MetW C7R87_2762 PF01725 Ham1 family C7R87_2764 PF02416 mttA/Hcf106 family C7R87_2765 PF02416 mttA/Hcf106 family C7R87_2766 PF00902 Sec-independent protein translocase protein (TatC) C7R87_2770 PF01790 Prolipoprotein diacylglyceryl transferase C7R87_2773 PF00303 Thymidylate synthase C7R87_2774 PF00186 Dihydrofolate reductase C7R87_2776 PF01625 Peptide methionine sulfoxide reductase C7R87_2778 PF01618 MotA/TolQ/ExbB proton channel family C7R87_2780 PF01842 ACT domain C7R87_2780 PF00551 Formyl transferase C7R87_2782 PF00171 Aldehyde dehydrogenase family C7R87_2783 PF00830 Ribosomal L28 family C7R87_2784 PF00471 Ribosomal protein L33 C7R87_2785 PF00999 Sodium/hydrogen exchanger family C7R87_2785 PF02254 TrkA-N domain C7R87_2789 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C7R87_2790 PF00580 UvrD/REP helicase N-terminal domain C7R87_2790 PF13361 UvrD-like helicase C-terminal domain C7R87_2793 PF08272 Topoisomerase I zinc-ribbon-like C7R87_2793 PF01396 Topoisomerase DNA binding C4 zinc finger C7R87_2793 PF01131 DNA topoisomerase C7R87_2793 PF01751 Toprim domain C7R87_2795 PF01638 HxlR-like helix-turn-helix C7R87_2796 PF00107 Zinc-binding dehydrogenase C7R87_2796 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_2799 PF01810 LysE type translocator C7R87_2800 PF03279 Bacterial lipid A biosynthesis acyltransferase C7R87_2802 PF00375 Sodium:dicarboxylate symporter family C7R87_2804 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7R87_2804 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7R87_2808 PF01416 tRNA pseudouridine synthase C7R87_2810 PF01176 Translation initiation factor 1A / IF-1 C7R87_2815 PF00180 Isocitrate/isopropylmalate dehydrogenase C7R87_2817 PF00694 Aconitase C-terminal domain C7R87_2818 PF00330 Aconitase family (aconitate hydratase) C7R87_2820 PF03466 LysR substrate binding domain C7R87_2820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2824 PF00293 NUDIX domain C7R87_2825 PF01590 GAF domain C7R87_2825 PF05524 PEP-utilising enzyme, N-terminal C7R87_2825 PF00391 PEP-utilising enzyme, mobile domain C7R87_2825 PF02896 PEP-utilising enzyme, TIM barrel domain C7R87_2827 PF00141 Peroxidase C7R87_2828 PF12706 Beta-lactamase superfamily domain C7R87_2829 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2829 PF03466 LysR substrate binding domain C7R87_2831 PF02798 Glutathione S-transferase, N-terminal domain C7R87_2832 PF13280 WYL domain C7R87_2832 PF08279 HTH domain C7R87_2833 PF13419 Haloacid dehalogenase-like hydrolase C7R87_2834 PF00849 RNA pseudouridylate synthase C7R87_2834 PF01479 S4 domain C7R87_2836 PF10150 Ribonuclease E/G family C7R87_2836 PF12111 Polyribonucleotide phosphorylase C terminal C7R87_2836 PF00575 S1 RNA binding domain C7R87_2837 PF13193 AMP-binding enzyme C-terminal domain C7R87_2837 PF00501 AMP-binding enzyme C7R87_2840 PF03466 LysR substrate binding domain C7R87_2840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_2841 PF00106 short chain dehydrogenase C7R87_2842 PF06969 HemN C-terminal domain C7R87_2842 PF04055 Radical SAM superfamily C7R87_2844 PF01554 MatE C7R87_2845 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7R87_2845 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_2845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_2846 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7R87_2846 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_2847 PF03109 ABC1 family C7R87_2848 PF01197 Ribosomal protein L31 C7R87_2850 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C7R87_2853 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_2853 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7R87_2855 PF03884 DNA gyrase inhibitor YacG C7R87_2856 PF00753 Metallo-beta-lactamase superfamily C7R87_2857 PF00762 Ferrochelatase C7R87_2860 PF01177 Asp/Glu/Hydantoin racemase C7R87_2863 PF01206 Sulfurtransferase TusA C7R87_2864 PF03471 Transporter associated domain C7R87_2864 PF00571 CBS domain C7R87_2865 PF00795 Carbon-nitrogen hydrolase C7R87_2866 PF01588 Putative tRNA binding domain C7R87_2868 PF08334 Type II secretion system (T2SS), protein G C7R87_2868 PF07963 Prokaryotic N-terminal methylation motif C7R87_2869 PF00482 Type II secretion system (T2SS), protein F C7R87_2870 PF18074 Primosomal protein N C-terminal domain C7R87_2870 PF17764 3′ DNA-binding domain (3′BD) C7R87_2870 PF00271 Helicase conserved C-terminal domain C7R87_2870 PF00270 DEAD/DEAH box helicase C7R87_2870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C7R87_2871 PF00999 Sodium/hydrogen exchanger family C7R87_2871 PF02254 TrkA-N domain C7R87_2872 PF01430 Hsp33 protein C7R87_2874 PF01556 DnaJ C terminal domain C7R87_2874 PF00226 DnaJ domain C7R87_2876 PF01544 CorA-like Mg2+ transporter protein C7R87_2877 PF03725 3' exoribonuclease family, domain 2 C7R87_2877 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C7R87_2877 PF00013 KH domain C7R87_2877 PF00575 S1 RNA binding domain C7R87_2877 PF01138 3' exoribonuclease family, domain 1 C7R87_2878 PF00312 Ribosomal protein S15 C7R87_2880 PF13538 UvrD-like helicase C-terminal domain C7R87_2881 PF12705 PD-(D/E)XK nuclease superfamily C7R87_2881 PF13361 UvrD-like helicase C-terminal domain C7R87_2881 PF00580 UvrD/REP helicase N-terminal domain C7R87_2882 PF17946 RecC C-terminal domain C7R87_2884 PF03976 Polyphosphate kinase 2 (PPK2) C7R87_2886 PF01209 ubiE/COQ5 methyltransferase family C7R87_2888 PF03109 ABC1 family C7R87_2889 PF01494 FAD binding domain C7R87_2890 PF01502 Phosphoribosyl-AMP cyclohydrolase C7R87_2893 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C7R87_2893 PF13244 Domain of unknown function (DUF4040) C7R87_2893 PF00361 Proton-conducting membrane transporter C7R87_2893 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C7R87_2894 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C7R87_2895 PF00361 Proton-conducting membrane transporter C7R87_2897 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C7R87_2899 PF02033 Ribosome-binding factor A C7R87_2900 PF00009 Elongation factor Tu GTP binding domain C7R87_2900 PF08364 Bacterial translation initiation factor IF-2 associated region C7R87_2900 PF04760 Translation initiation factor IF-2, N-terminal region C7R87_2900 PF11987 Translation-initiation factor 2 C7R87_2901 PF13184 NusA-like KH domain C7R87_2901 PF08529 NusA N-terminal domain C7R87_2901 PF00575 S1 RNA binding domain C7R87_2902 PF02576 RimP N-terminal domain C7R87_2902 PF17384 RimP C-terminal SH3 domain C7R87_2906 PF03840 Preprotein translocase SecG subunit C7R87_2907 PF00121 Triosephosphate isomerase C7R87_2908 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C7R87_2908 PF00437 Type II/IV secretion system protein C7R87_2909 PF00482 Type II secretion system (T2SS), protein F C7R87_2910 PF01478 Type IV leader peptidase family C7R87_2910 PF06750 Bacterial Peptidase A24 N-terminal domain C7R87_2911 PF01121 Dephospho-CoA kinase C7R87_2913 PF00588 SpoU rRNA Methylase family C7R87_2913 PF08032 RNA 2'-O ribose methyltransferase substrate binding C7R87_2914 PF06865 Pyrimidine/purine nucleoside phosphorylase C7R87_2916 PF02463 RecF/RecN/SMC N terminal domain C7R87_2917 PF02622 Uncharacterized ACR, COG1678 C7R87_2918 PF03652 Holliday junction resolvase C7R87_2919 PF13533 Biotin-lipoyl like C7R87_2924 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7R87_2924 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7R87_2924 PF02805 Metal binding domain of Ada C7R87_2924 PF12833 Helix-turn-helix domain C7R87_2925 PF01066 CDP-alcohol phosphatidyltransferase C7R87_2927 PF01541 GIY-YIG catalytic domain C7R87_2927 PF02151 UvrB/uvrC motif C7R87_2927 PF08459 UvrC Helix-hairpin-helix N-terminal C7R87_2933 PF00665 Integrase core domain C7R87_2935 PF00809 Pterin binding enzyme C7R87_2940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7R87_2940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7R87_2940 PF00378 Enoyl-CoA hydratase/isomerase C7R87_2941 PF02803 Thiolase, C-terminal domain C7R87_2941 PF00108 Thiolase, N-terminal domain C7R87_2945 PF00376 MerR family regulatory protein C7R87_2945 PF09278 MerR, DNA binding C7R87_2947 PF01323 DSBA-like thioredoxin domain C7R87_2950 PF00183 Hsp90 protein C7R87_2950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2953 PF13726 Na+-H+ antiporter family C7R87_2953 PF03553 Na+/H+ antiporter family C7R87_2954 PF00561 alpha/beta hydrolase fold C7R87_2958 PF04998 RNA polymerase Rpb1, domain 5 C7R87_2958 PF04997 RNA polymerase Rpb1, domain 1 C7R87_2958 PF04983 RNA polymerase Rpb1, domain 3 C7R87_2958 PF05000 RNA polymerase Rpb1, domain 4 C7R87_2958 PF00623 RNA polymerase Rpb1, domain 2 C7R87_2959 PF04563 RNA polymerase beta subunit C7R87_2959 PF04561 RNA polymerase Rpb2, domain 2 C7R87_2959 PF04565 RNA polymerase Rpb2, domain 3 C7R87_2959 PF04560 RNA polymerase Rpb2, domain 7 C7R87_2959 PF10385 RNA polymerase beta subunit external 1 domain C7R87_2959 PF00562 RNA polymerase Rpb2, domain 6 C7R87_2960 PF16320 Ribosomal protein L7/L12 dimerisation domain C7R87_2960 PF00542 Ribosomal protein L7/L12 C-terminal domain C7R87_2961 PF00466 Ribosomal protein L10 C7R87_2962 PF00687 Ribosomal protein L1p/L10e family C7R87_2963 PF03946 Ribosomal protein L11, N-terminal domain C7R87_2963 PF00298 Ribosomal protein L11, RNA binding domain C7R87_2964 PF00467 KOW motif C7R87_2964 PF02357 Transcription termination factor nusG C7R87_2965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C7R87_2967 PF00009 Elongation factor Tu GTP binding domain C7R87_2967 PF03144 Elongation factor Tu domain 2 C7R87_2967 PF03143 Elongation factor Tu C-terminal domain C7R87_2972 PF04715 Anthranilate synthase component I, N terminal region C7R87_2972 PF00425 chorismate binding enzyme C7R87_2973 PF13419 Haloacid dehalogenase-like hydrolase C7R87_2974 PF12401 Protein of unknown function (DUF2662) C7R87_2974 PF00498 FHA domain C7R87_2975 PF00263 Bacterial type II and III secretion system protein C7R87_2975 PF03958 Bacterial type II/III secretion system short domain C7R87_2978 PF00816 H-NS histone family C7R87_2983 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C7R87_2983 PF03900 Porphobilinogen deaminase, C-terminal domain C7R87_2984 PF00072 Response regulator receiver domain C7R87_2984 PF04397 LytTr DNA-binding domain C7R87_2985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_2985 PF06580 Histidine kinase C7R87_2985 PF07694 5TMR of 5TMR-LYT C7R87_2986 PF00206 Lyase C7R87_2986 PF14698 Argininosuccinate lyase C-terminal C7R87_2987 PF04362 Bacterial Fe(2+) trafficking C7R87_2988 PF01895 PhoU domain C7R87_2989 PF02321 Outer membrane efflux protein C7R87_2990 PF00892 EamA-like transporter family C7R87_2993 PF01964 Radical SAM ThiC family C7R87_2993 PF13667 ThiC-associated domain C7R87_2994 PF00293 NUDIX domain C7R87_2995 PF00149 Calcineurin-like phosphoesterase C7R87_2996 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7R87_2997 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7R87_2998 PF01098 Cell cycle protein C7R87_2999 PF02875 Mur ligase family, glutamate ligase domain C7R87_2999 PF08245 Mur ligase middle domain C7R87_3001 PF07670 Nucleoside recognition C7R87_3001 PF02421 Ferrous iron transport protein B C7R87_3001 PF07664 Ferrous iron transport protein B C terminus C7R87_3003 PF02899 Phage integrase, N-terminal SAM-like domain C7R87_3003 PF00589 Phage integrase family C7R87_3004 PF10411 Disulfide bond isomerase protein N-terminus C7R87_3004 PF13098 Thioredoxin-like domain C7R87_3005 PF01842 ACT domain C7R87_3005 PF00742 Homoserine dehydrogenase C7R87_3005 PF03447 Homoserine dehydrogenase, NAD binding domain C7R87_3006 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_3007 PF00768 D-alanyl-D-alanine carboxypeptidase C7R87_3008 PF00072 Response regulator receiver domain C7R87_3008 PF00196 Bacterial regulatory proteins, luxR family C7R87_3009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3009 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3010 PF02954 Bacterial regulatory protein, Fis family C7R87_3010 PF00072 Response regulator receiver domain C7R87_3010 PF00158 Sigma-54 interaction domain C7R87_3011 PF03572 Peptidase family S41 C7R87_3011 PF00595 PDZ domain C7R87_3012 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C7R87_3012 PF01676 Metalloenzyme superfamily C7R87_3013 PF03739 Lipopolysaccharide export system permease LptF/LptG C7R87_3015 PF02789 Cytosol aminopeptidase family, N-terminal domain C7R87_3015 PF00883 Cytosol aminopeptidase family, catalytic domain C7R87_3019 PF00677 Lumazine binding domain C7R87_3021 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7R87_3021 PF01872 RibD C-terminal domain C7R87_3022 PF03477 ATP cone domain C7R87_3023 PF00909 Ammonium Transporter Family C7R87_3024 PF00543 Nitrogen regulatory protein P-II C7R87_3026 PF01078 Magnesium chelatase, subunit ChlI C7R87_3026 PF13335 Magnesium chelatase, subunit ChlI C-terminal C7R87_3028 PF01636 Phosphotransferase enzyme family C7R87_3029 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C7R87_3032 PF02909 Tetracyclin repressor-like, C-terminal domain C7R87_3032 PF00440 Bacterial regulatory proteins, tetR family C7R87_3033 PF07690 Major Facilitator Superfamily C7R87_3038 PF00916 Sulfate permease family C7R87_3038 PF01740 STAS domain C7R87_3039 PF00582 Universal stress protein family C7R87_3043 PF00665 Integrase core domain C7R87_3045 PF13335 Magnesium chelatase, subunit ChlI C-terminal C7R87_3045 PF01078 Magnesium chelatase, subunit ChlI C7R87_3046 PF00155 Aminotransferase class I and II C7R87_3046 PF00392 Bacterial regulatory proteins, gntR family C7R87_3048 PF00701 Dihydrodipicolinate synthetase family C7R87_3051 PF03573 outer membrane porin, OprD family C7R87_3052 PF00719 Inorganic pyrophosphatase C7R87_3055 PF13193 AMP-binding enzyme C-terminal domain C7R87_3055 PF00501 AMP-binding enzyme C7R87_3056 PF03989 DNA gyrase C-terminal domain, beta-propeller C7R87_3056 PF00521 DNA gyrase/topoisomerase IV, subunit A C7R87_3057 PF07690 Major Facilitator Superfamily C7R87_3058 PF03458 UPF0126 domain C7R87_3059 PF02810 SEC-C motif C7R87_3060 PF03471 Transporter associated domain C7R87_3060 PF03741 Integral membrane protein TerC family C7R87_3062 PF03641 Possible lysine decarboxylase C7R87_3063 PF07690 Major Facilitator Superfamily C7R87_3065 PF00817 impB/mucB/samB family C7R87_3065 PF11798 IMS family HHH motif C7R87_3065 PF11799 impB/mucB/samB family C-terminal domain C7R87_3068 PF08497 Radical SAM N-terminal C7R87_3068 PF04055 Radical SAM superfamily C7R87_3068 PF11842 Domain of unknown function (DUF3362) C7R87_3072 PF03358 NADPH-dependent FMN reductase C7R87_3074 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_3081 PF00440 Bacterial regulatory proteins, tetR family C7R87_3086 PF01327 Polypeptide deformylase C7R87_3088 PF02481 DNA recombination-mediator protein A C7R87_3088 PF17782 DprA winged helix domain C7R87_3089 PF01300 Telomere recombination C7R87_3090 PF00892 EamA-like transporter family C7R87_3091 PF00440 Bacterial regulatory proteins, tetR family C7R87_3092 PF07690 Major Facilitator Superfamily C7R87_3094 PF00255 Glutathione peroxidase C7R87_3096 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C7R87_3097 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7R87_3097 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7R87_3098 PF00231 ATP synthase C7R87_3099 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7R87_3099 PF00306 ATP synthase alpha/beta chain, C terminal domain C7R87_3099 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7R87_3100 PF00213 ATP synthase delta (OSCP) subunit C7R87_3101 PF00430 ATP synthase B/B' CF(0) C7R87_3102 PF00137 ATP synthase subunit C C7R87_3103 PF00119 ATP synthase A chain C7R87_3107 PF00005 ABC transporter C7R87_3108 PF00950 ABC 3 transport family C7R87_3109 PF01810 LysE type translocator C7R87_3110 PF04261 Dyp-type peroxidase family C7R87_3112 PF03949 Malic enzyme, NAD binding domain C7R87_3112 PF00390 Malic enzyme, N-terminal domain C7R87_3113 PF05746 DALR anticodon binding domain C7R87_3113 PF00750 tRNA synthetases class I (R) C7R87_3113 PF03485 Arginyl tRNA synthetase N terminal domain C7R87_3117 PF05726 Pirin C-terminal cupin domain C7R87_3117 PF02678 Pirin C7R87_3119 PF03551 Transcriptional regulator PadR-like family C7R87_3120 PF13427 Domain of unknown function (DUF4111) C7R87_3120 PF01909 Nucleotidyltransferase domain C7R87_3121 PF02540 NAD synthase C7R87_3121 PF00117 Glutamine amidotransferase class-I C7R87_3121 PF00958 GMP synthase C terminal domain C7R87_3122 PF04286 Protein of unknown function (DUF445) C7R87_3123 PF07681 DoxX C7R87_3124 PF09335 SNARE associated Golgi protein C7R87_3127 PF13614 AAA domain C7R87_3129 PF01722 BolA-like protein C7R87_3132 PF01648 4'-phosphopantetheinyl transferase superfamily C7R87_3133 PF12697 Alpha/beta hydrolase family C7R87_3136 PF00975 Thioesterase domain C7R87_3136 PF00550 Phosphopantetheine attachment site C7R87_3136 PF00668 Condensation domain C7R87_3136 PF13193 AMP-binding enzyme C-terminal domain C7R87_3136 PF00501 AMP-binding enzyme C7R87_3137 PF16197 Ketoacyl-synthetase C-terminal extension C7R87_3137 PF00975 Thioesterase domain C7R87_3137 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_3137 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_3137 PF08242 Methyltransferase domain C7R87_3137 PF14765 Polyketide synthase dehydratase C7R87_3137 PF00550 Phosphopantetheine attachment site C7R87_3138 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3138 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3138 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3139 PF00501 AMP-binding enzyme C7R87_3140 PF13737 Transposase DDE domain C7R87_3141 PF03472 Autoinducer binding domain C7R87_3141 PF00196 Bacterial regulatory proteins, luxR family C7R87_3143 PF00765 Autoinducer synthase C7R87_3144 PF00083 Sugar (and other) transporter C7R87_3144 PF07690 Major Facilitator Superfamily C7R87_3145 PF00378 Enoyl-CoA hydratase/isomerase C7R87_3146 PF00378 Enoyl-CoA hydratase/isomerase C7R87_3147 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3147 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3147 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3148 PF13193 AMP-binding enzyme C-terminal domain C7R87_3148 PF00501 AMP-binding enzyme C7R87_3149 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7R87_3149 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7R87_3150 PF00171 Aldehyde dehydrogenase family C7R87_3152 PF00324 Amino acid permease C7R87_3153 PF00324 Amino acid permease C7R87_3154 PF01042 Endoribonuclease L-PSP C7R87_3155 PF01168 Alanine racemase, N-terminal domain C7R87_3155 PF00842 Alanine racemase, C-terminal domain C7R87_3156 PF01266 FAD dependent oxidoreductase C7R87_3157 PF01037 Lrp/AsnC ligand binding domain C7R87_3159 PF07715 TonB-dependent Receptor Plug Domain C7R87_3159 PF00593 TonB dependent receptor C7R87_3162 PF00849 RNA pseudouridylate synthase C7R87_3165 PF02801 Beta-ketoacyl synthase, C-terminal domain C7R87_3165 PF00109 Beta-ketoacyl synthase, N-terminal domain C7R87_3166 PF00293 NUDIX domain C7R87_3169 PF00694 Aconitase C-terminal domain C7R87_3169 PF00330 Aconitase family (aconitate hydratase) C7R87_3170 PF00285 Citrate synthase, C-terminal domain C7R87_3172 PF07729 FCD domain C7R87_3172 PF00392 Bacterial regulatory proteins, gntR family C7R87_3173 PF00155 Aminotransferase class I and II C7R87_3174 PF01565 FAD binding domain C7R87_3174 PF09330 D-lactate dehydrogenase, membrane binding C7R87_3175 PF01070 FMN-dependent dehydrogenase C7R87_3176 PF07729 FCD domain C7R87_3176 PF00392 Bacterial regulatory proteins, gntR family C7R87_3177 PF02652 L-lactate permease C7R87_3179 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7R87_3179 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7R87_3179 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7R87_3179 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7R87_3180 PF16363 GDP-mannose 4,6 dehydratase C7R87_3181 PF00342 Phosphoglucose isomerase C7R87_3182 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7R87_3182 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7R87_3182 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7R87_3183 PF00483 Nucleotidyl transferase C7R87_3184 PF02397 Bacterial sugar transferase C7R87_3185 PF00953 Glycosyl transferase family 4 C7R87_3186 PF01370 NAD dependent epimerase/dehydratase family C7R87_3187 PF13579 Glycosyl transferase 4-like domain C7R87_3189 PF01370 NAD dependent epimerase/dehydratase family C7R87_3190 PF08485 Polysaccharide biosynthesis protein C-terminal C7R87_3190 PF02719 Polysaccharide biosynthesis protein C7R87_3195 PF01370 NAD dependent epimerase/dehydratase family C7R87_3196 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7R87_3196 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7R87_3196 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7R87_3197 PF10531 SLBB domain C7R87_3197 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C7R87_3197 PF02563 Polysaccharide biosynthesis/export protein C7R87_3198 PF01451 Low molecular weight phosphotyrosine protein phosphatase C7R87_3199 PF13807 G-rich domain on putative tyrosine kinase C7R87_3199 PF02706 Chain length determinant protein C7R87_3199 PF13614 AAA domain C7R87_3200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_3200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C7R87_3201 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_3201 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C7R87_3202 PF03023 Lipid II flippase MurJ C7R87_3203 PF01510 N-acetylmuramoyl-L-alanine amidase C7R87_3204 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C7R87_3204 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C7R87_3206 PF05506 Domain of unknown function (DUF756) C7R87_3206 PF04185 Phosphoesterase family C7R87_3208 PF03725 3' exoribonuclease family, domain 2 C7R87_3208 PF01138 3' exoribonuclease family, domain 1 C7R87_3209 PF00487 Fatty acid desaturase C7R87_3210 PF00970 Oxidoreductase FAD-binding domain C7R87_3210 PF00111 2Fe-2S iron-sulfur cluster binding domain C7R87_3210 PF00175 Oxidoreductase NAD-binding domain C7R87_3211 PF00440 Bacterial regulatory proteins, tetR family C7R87_3212 PF00440 Bacterial regulatory proteins, tetR family C7R87_3212 PF08360 QacR-like protein, C-terminal region C7R87_3213 PF01323 DSBA-like thioredoxin domain C7R87_3215 PF13419 Haloacid dehalogenase-like hydrolase C7R87_3216 PF00106 short chain dehydrogenase C7R87_3219 PF00696 Amino acid kinase family C7R87_3219 PF00583 Acetyltransferase (GNAT) family C7R87_3220 PF09084 NMT1/THI5 like C7R87_3221 PF09084 NMT1/THI5 like C7R87_3222 PF00296 Luciferase-like monooxygenase C7R87_3223 PF00528 Binding-protein-dependent transport system inner membrane component C7R87_3224 PF00005 ABC transporter C7R87_3225 PF00440 Bacterial regulatory proteins, tetR family C7R87_3225 PF08362 YcdC-like protein, C-terminal region C7R87_3226 PF01048 Phosphorylase superfamily C7R87_3228 PF01687 Riboflavin kinase C7R87_3228 PF06574 FAD synthetase C7R87_3229 PF06827 Zinc finger found in FPG and IleRS C7R87_3229 PF08264 Anticodon-binding domain of tRNA C7R87_3229 PF00133 tRNA synthetases class I (I, L, M and V) C7R87_3230 PF01252 Signal peptidase (SPase) II C7R87_3231 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7R87_3239 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7R87_3240 PF07859 alpha/beta hydrolase fold C7R87_3244 PF03466 LysR substrate binding domain C7R87_3244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3245 PF01025 GrpE C7R87_3246 PF00012 Hsp70 protein C7R87_3250 PF13406 Transglycosylase SLT domain C7R87_3251 PF02222 ATP-grasp domain C7R87_3251 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C7R87_3252 PF00731 AIR carboxylase C7R87_3255 PF01225 Mur ligase family, catalytic domain C7R87_3255 PF08245 Mur ligase middle domain C7R87_3255 PF02875 Mur ligase family, glutamate ligase domain C7R87_3257 PF01569 PAP2 superfamily C7R87_3258 PF03741 Integral membrane protein TerC family C7R87_3261 PF03738 Glutathionylspermidine synthase preATP-grasp C7R87_3262 PF00355 Rieske [2Fe-2S] domain C7R87_3263 PF01979 Amidohydrolase family C7R87_3265 PF00156 Phosphoribosyl transferase domain C7R87_3267 PF10411 Disulfide bond isomerase protein N-terminus C7R87_3267 PF13098 Thioredoxin-like domain C7R87_3268 PF01545 Cation efflux family C7R87_3268 PF16916 Dimerisation domain of Zinc Transporter C7R87_3269 PF02583 Metal-sensitive transcriptional repressor C7R87_3270 PF10396 GTP-binding protein TrmE N-terminus C7R87_3270 PF12631 MnmE helical domain C7R87_3270 PF01926 50S ribosome-binding GTPase C7R87_3271 PF02096 60Kd inner membrane protein C7R87_3271 PF14849 YidC periplasmic domain C7R87_3272 PF01809 Putative membrane protein insertion efficiency factor C7R87_3273 PF00825 Ribonuclease P C7R87_3274 PF00468 Ribosomal protein L34 C7R87_3275 PF11638 DnaA N-terminal domain C7R87_3275 PF08299 Bacterial dnaA protein helix-turn-helix C7R87_3275 PF00308 Bacterial dnaA protein C7R87_3276 PF02767 DNA polymerase III beta subunit, central domain C7R87_3276 PF00712 DNA polymerase III beta subunit, N-terminal domain C7R87_3276 PF02768 DNA polymerase III beta subunit, C-terminal domain C7R87_3277 PF02463 RecF/RecN/SMC N terminal domain C7R87_3278 PF00986 DNA gyrase B subunit, carboxyl terminus C7R87_3278 PF18053 DNA gyrase B subunit insert domain C7R87_3278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3278 PF01751 Toprim domain C7R87_3278 PF00204 DNA gyrase B C7R87_3280 PF09335 SNARE associated Golgi protein C7R87_3281 PF12848 ABC transporter C7R87_3281 PF00005 ABC transporter C7R87_3285 PF01521 Iron-sulphur cluster biosynthesis C7R87_3286 PF00561 alpha/beta hydrolase fold C7R87_3287 PF03702 Anhydro-N-acetylmuramic acid kinase C7R87_3288 PF00579 tRNA synthetases class I (W and Y) C7R87_3298 PF00209 Sodium:neurotransmitter symporter family C7R87_3300 PF01189 16S rRNA methyltransferase RsmB/F C7R87_3300 PF01029 NusB family C7R87_3301 PF02911 Formyl transferase, C-terminal domain C7R87_3301 PF00551 Formyl transferase C7R87_3302 PF00920 Dehydratase family C7R87_3305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3305 PF03466 LysR substrate binding domain C7R87_3306 PF00860 Permease family C7R87_3307 PF00311 Phosphoenolpyruvate carboxylase C7R87_3309 PF00440 Bacterial regulatory proteins, tetR family C7R87_3309 PF08361 MAATS-type transcriptional repressor, C-terminal region C7R87_3310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_3311 PF00873 AcrB/AcrD/AcrF family C7R87_3313 PF00684 DnaJ central domain C7R87_3313 PF00226 DnaJ domain C7R87_3313 PF01556 DnaJ C terminal domain C7R87_3315 PF01113 Dihydrodipicolinate reductase, N-terminus C7R87_3315 PF05173 Dihydrodipicolinate reductase, C-terminus C7R87_3317 PF07690 Major Facilitator Superfamily C7R87_3318 PF00248 Aldo/keto reductase family C7R87_3319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3319 PF03466 LysR substrate binding domain C7R87_3322 PF00392 Bacterial regulatory proteins, gntR family C7R87_3322 PF00155 Aminotransferase class I and II C7R87_3323 PF00107 Zinc-binding dehydrogenase C7R87_3323 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_3324 PF03352 Methyladenine glycosylase C7R87_3327 PF14815 NUDIX domain C7R87_3327 PF00730 HhH-GPD superfamily base excision DNA repair protein C7R87_3327 PF00633 Helix-hairpin-helix motif C7R87_3327 PF10576 Iron-sulfur binding domain of endonuclease III C7R87_3330 PF07043 Protein of unknown function (DUF1328) C7R87_3331 PF03692 Putative zinc- or iron-chelating domain C7R87_3332 PF07995 Glucose / Sorbosone dehydrogenase C7R87_3333 PF00004 ATPase family associated with various cellular activities (AAA) C7R87_3333 PF16193 AAA C-terminal domain C7R87_3333 PF12002 MgsA AAA+ ATPase C terminal C7R87_3334 PF01226 Formate/nitrite transporter C7R87_3337 PF01259 SAICAR synthetase C7R87_3339 PF00701 Dihydrodipicolinate synthetase family C7R87_3340 PF00857 Isochorismatase family C7R87_3341 PF01758 Sodium Bile acid symporter family C7R87_3342 PF01554 MatE C7R87_3343 PF04463 Protein of unknown function (DUF523) C7R87_3344 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7R87_3346 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7R87_3347 PF14497 Glutathione S-transferase, C-terminal domain C7R87_3347 PF02798 Glutathione S-transferase, N-terminal domain C7R87_3349 PF00324 Amino acid permease C7R87_3351 PF07683 Cobalamin synthesis protein cobW C-terminal domain C7R87_3351 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7R87_3354 PF00392 Bacterial regulatory proteins, gntR family C7R87_3354 PF07702 UTRA domain C7R87_3355 PF05962 HutD C7R87_3356 PF01175 Urocanase Rossmann-like domain C7R87_3356 PF17392 Urocanase C-terminal domain C7R87_3356 PF17391 Urocanase N-terminal domain C7R87_3357 PF00221 Aromatic amino acid lyase C7R87_3358 PF00324 Amino acid permease C7R87_3359 PF01979 Amidohydrolase family C7R87_3360 PF00491 Arginase family C7R87_3362 PF13419 Haloacid dehalogenase-like hydrolase C7R87_3363 PF01177 Asp/Glu/Hydantoin racemase C7R87_3364 PF01380 SIS domain C7R87_3365 PF12804 MobA-like NTP transferase domain C7R87_3365 PF14602 Hexapeptide repeat of succinyl-transferase C7R87_3365 PF00132 Bacterial transferase hexapeptide (six repeats) C7R87_3366 PF04608 Phosphatidylglycerophosphatase A C7R87_3368 PF00586 AIR synthase related protein, N-terminal domain C7R87_3368 PF02769 AIR synthase related protein, C-terminal domain C7R87_3369 PF01029 NusB family C7R87_3370 PF00885 6,7-dimethyl-8-ribityllumazine synthase C7R87_3371 PF00925 GTP cyclohydrolase II C7R87_3371 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C7R87_3376 PF02580 D-Tyr-tRNA(Tyr) deacylase C7R87_3377 PF00199 Catalase C7R87_3377 PF06628 Catalase-related immune-responsive C7R87_3379 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C7R87_3379 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C7R87_3380 PF00581 Rhodanese-like domain C7R87_3381 PF02666 Phosphatidylserine decarboxylase C7R87_3382 PF03069 Acetamidase/Formamidase family C7R87_3385 PF11808 Phosphate regulon sensor protein PhoR C7R87_3385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3385 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3385 PF00989 PAS fold C7R87_3386 PF00486 Transcriptional regulatory protein, C terminal C7R87_3386 PF00072 Response regulator receiver domain C7R87_3388 PF00106 short chain dehydrogenase C7R87_3389 PF01554 MatE C7R87_3390 PF00155 Aminotransferase class I and II C7R87_3391 PF04286 Protein of unknown function (DUF445) C7R87_3394 PF04262 Glutamate-cysteine ligase C7R87_3395 PF02600 Disulfide bond formation protein DsbB C7R87_3396 PF04717 Type VI secretion system, phage-baseplate injector C7R87_3397 PF00182 Chitinase class I C7R87_3402 PF05728 Uncharacterised protein family (UPF0227) C7R87_3403 PF01751 Toprim domain C7R87_3403 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3403 PF00204 DNA gyrase B C7R87_3403 PF00986 DNA gyrase B subunit, carboxyl terminus C7R87_3404 PF04115 Ureidoglycolate lyase C7R87_3405 PF03561 Allantoicase repeat C7R87_3406 PF01494 FAD binding domain C7R87_3408 PF00860 Permease family C7R87_3409 PF00576 HIUase/Transthyretin family C7R87_3415 PF11412 Disulphide bond corrector protein DsbC C7R87_3415 PF02683 Cytochrome C biogenesis protein transmembrane region C7R87_3416 PF07694 5TMR of 5TMR-LYT C7R87_3416 PF00990 Diguanylate cyclase, GGDEF domain C7R87_3418 PF07859 alpha/beta hydrolase fold C7R87_3420 PF03960 ArsC family C7R87_3421 PF03372 Endonuclease/Exonuclease/phosphatase family C7R87_3422 PF00156 Phosphoribosyl transferase domain C7R87_3427 PF00665 Integrase core domain C7R87_3429 PF00809 Pterin binding enzyme C7R87_3433 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C7R87_3433 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C7R87_3434 PF03033 Glycosyltransferase family 28 N-terminal domain C7R87_3434 PF04101 Glycosyltransferase family 28 C-terminal domain C7R87_3435 PF08245 Mur ligase middle domain C7R87_3435 PF01225 Mur ligase family, catalytic domain C7R87_3435 PF02875 Mur ligase family, glutamate ligase domain C7R87_3436 PF07478 D-ala D-ala ligase C-terminus C7R87_3436 PF01820 D-ala D-ala ligase N-terminus C7R87_3437 PF08478 POTRA domain, FtsQ-type C7R87_3437 PF03799 Cell division protein FtsQ C7R87_3438 PF02491 SHS2 domain inserted in FTSA C7R87_3439 PF00091 Tubulin/FtsZ family, GTPase domain C7R87_3439 PF12327 FtsZ family, C-terminal domain C7R87_3440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C7R87_3442 PF01551 Peptidase family M23 C7R87_3443 PF00456 Transketolase, thiamine diphosphate binding domain C7R87_3443 PF17831 Pyruvate dehydrogenase E1 component middle domain C7R87_3444 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7R87_3444 PF00364 Biotin-requiring enzyme C7R87_3444 PF02817 e3 binding domain C7R87_3446 PF01169 Uncharacterized protein family UPF0016 C7R87_3447 PF00593 TonB dependent receptor C7R87_3447 PF07715 TonB-dependent Receptor Plug Domain C7R87_3448 PF01613 Flavin reductase like domain C7R87_3448 PF00258 Flavodoxin C7R87_3449 PF03692 Putative zinc- or iron-chelating domain C7R87_3450 PF00571 CBS domain C7R87_3450 PF00478 IMP dehydrogenase / GMP reductase domain C7R87_3451 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7R87_3451 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7R87_3451 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7R87_3451 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7R87_3452 PF01243 Pyridoxamine 5'-phosphate oxidase C7R87_3452 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C7R87_3453 PF02272 DHHA1 domain C7R87_3453 PF17768 RecJ OB domain C7R87_3453 PF01368 DHH family C7R87_3455 PF03462 PCRF domain C7R87_3455 PF00472 RF-1 domain C7R87_3458 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7R87_3459 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C7R87_3460 PF04452 RNA methyltransferase C7R87_3461 PF00924 Mechanosensitive ion channel C7R87_3464 PF16177 Acetyl-coenzyme A synthetase N-terminus C7R87_3464 PF00501 AMP-binding enzyme C7R87_3464 PF13193 AMP-binding enzyme C-terminal domain C7R87_3465 PF00857 Isochorismatase family C7R87_3466 PF01037 Lrp/AsnC ligand binding domain C7R87_3467 PF00296 Luciferase-like monooxygenase C7R87_3468 PF03358 NADPH-dependent FMN reductase C7R87_3469 PF00196 Bacterial regulatory proteins, luxR family C7R87_3469 PF00072 Response regulator receiver domain C7R87_3471 PF01627 Hpt domain C7R87_3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3471 PF00672 HAMP domain C7R87_3471 PF00072 Response regulator receiver domain C7R87_3471 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3472 PF04341 Protein of unknown function, DUF485 C7R87_3473 PF00474 Sodium:solute symporter family C7R87_3476 PF02028 BCCT, betaine/carnitine/choline family transporter C7R87_3479 PF17158 Membrane-associated sensor, integral membrane domain C7R87_3479 PF00990 Diguanylate cyclase, GGDEF domain C7R87_3480 PF17760 UvrA interaction domain C7R87_3480 PF17755 UvrA DNA-binding domain C7R87_3480 PF00005 ABC transporter C7R87_3481 PF16925 Tetracyclin repressor-like, C-terminal domain C7R87_3481 PF00440 Bacterial regulatory proteins, tetR family C7R87_3482 PF08240 Alcohol dehydrogenase GroES-like domain C7R87_3482 PF00107 Zinc-binding dehydrogenase C7R87_3484 PF06942 GlpM protein C7R87_3485 PF03070 TENA/THI-4/PQQC family C7R87_3485 PF08543 Phosphomethylpyrimidine kinase C7R87_3485 PF02581 Thiamine monophosphate synthase C7R87_3487 PF07690 Major Facilitator Superfamily C7R87_3488 PF00436 Single-strand binding protein family C7R87_3490 PF03591 AzlC protein C7R87_3492 PF00324 Amino acid permease C7R87_3493 PF00155 Aminotransferase class I and II C7R87_3493 PF00392 Bacterial regulatory proteins, gntR family C7R87_3494 PF00202 Aminotransferase class-III C7R87_3495 PF00171 Aldehyde dehydrogenase family C7R87_3496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3497 PF00857 Isochorismatase family C7R87_3498 PF05726 Pirin C-terminal cupin domain C7R87_3498 PF02678 Pirin C7R87_3500 PF01593 Flavin containing amine oxidoreductase C7R87_3504 PF07690 Major Facilitator Superfamily C7R87_3505 PF03466 LysR substrate binding domain C7R87_3505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3510 PF00248 Aldo/keto reductase family C7R87_3511 PF12833 Helix-turn-helix domain C7R87_3511 PF02311 AraC-like ligand binding domain C7R87_3516 PF01638 HxlR-like helix-turn-helix C7R87_3519 PF01638 HxlR-like helix-turn-helix C7R87_3520 PF02525 Flavodoxin-like fold C7R87_3524 PF12833 Helix-turn-helix domain C7R87_3526 PF02705 K+ potassium transporter C7R87_3532 PF00230 Major intrinsic protein C7R87_3535 PF00977 Histidine biosynthesis protein C7R87_3536 PF01636 Phosphotransferase enzyme family C7R87_3541 PF00977 Histidine biosynthesis protein C7R87_3544 PF00117 Glutamine amidotransferase class-I C7R87_3545 PF00475 Imidazoleglycerol-phosphate dehydratase C7R87_3549 PF00583 Acetyltransferase (GNAT) family C7R87_3550 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C7R87_3550 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C7R87_3551 PF00672 HAMP domain C7R87_3551 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3552 PF00486 Transcriptional regulatory protein, C terminal C7R87_3552 PF00072 Response regulator receiver domain C7R87_3553 PF16921 Tex protein YqgF-like domain C7R87_3553 PF09371 Tex-like protein N-terminal domain C7R87_3553 PF00575 S1 RNA binding domain C7R87_3553 PF17674 HHH domain C7R87_3554 PF01740 STAS domain C7R87_3554 PF00916 Sulfate permease family C7R87_3555 PF00106 short chain dehydrogenase C7R87_3556 PF01053 Cys/Met metabolism PLP-dependent enzyme C7R87_3557 PF00005 ABC transporter C7R87_3557 PF12848 ABC transporter C7R87_3564 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7R87_3564 PF00529 HlyD membrane-fusion protein of T1SS C7R87_3565 PF00873 AcrB/AcrD/AcrF family C7R87_3566 PF01545 Cation efflux family C7R87_3571 PF00324 Amino acid permease C7R87_3574 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7R87_3577 PF01795 MraW methylase family C7R87_3579 PF00905 Penicillin binding protein transpeptidase domain C7R87_3579 PF03717 Penicillin-binding Protein dimerisation domain C7R87_3580 PF08245 Mur ligase middle domain C7R87_3580 PF01225 Mur ligase family, catalytic domain C7R87_3580 PF02875 Mur ligase family, glutamate ligase domain C7R87_3581 PF02875 Mur ligase family, glutamate ligase domain C7R87_3581 PF08245 Mur ligase middle domain C7R87_3581 PF01225 Mur ligase family, catalytic domain C7R87_3582 PF00953 Glycosyl transferase family 4 C7R87_3584 PF13847 Methyltransferase domain C7R87_3585 PF00905 Penicillin binding protein transpeptidase domain C7R87_3585 PF00912 Transglycosylase C7R87_3585 PF17092 Penicillin-binding protein OB-like domain C7R87_3590 PF07660 Secretin and TonB N terminus short domain C7R87_3590 PF00263 Bacterial type II and III secretion system protein C7R87_3590 PF03958 Bacterial type II/III secretion system short domain C7R87_3590 PF11741 AMIN domain C7R87_3591 PF01202 Shikimate kinase C7R87_3592 PF01761 3-dehydroquinate synthase C7R87_3594 PF04898 Glutamate synthase central domain C7R87_3594 PF00310 Glutamine amidotransferases class-II C7R87_3594 PF01493 GXGXG motif C7R87_3594 PF01645 Conserved region in glutamate synthase C7R87_3595 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_3595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7R87_3597 PF04011 LemA family C7R87_3598 PF04536 TPM domain C7R87_3600 PF00114 Pilin (bacterial filament) C7R87_3600 PF07963 Prokaryotic N-terminal methylation motif C7R87_3602 PF15864 Protein glycosylation ligase C7R87_3602 PF04932 O-Antigen ligase C7R87_3602 PF11846 Virulence factor membrane-bound polymerase, C-terminal C7R87_3603 PF00210 Ferritin-like domain C7R87_3605 PF04324 BFD-like [2Fe-2S] binding domain C7R87_3606 PF01042 Endoribonuclease L-PSP C7R87_3609 PF13291 ACT domain C7R87_3609 PF04607 Region found in RelA / SpoT proteins C7R87_3609 PF02824 TGS domain C7R87_3610 PF01192 RNA polymerase Rpb6 C7R87_3611 PF00625 Guanylate kinase C7R87_3612 PF02401 LytB protein C7R87_3620 PF00886 Ribosomal protein S16 C7R87_3621 PF05239 PRC-barrel domain C7R87_3621 PF01782 RimM N-terminal domain C7R87_3622 PF01746 tRNA (Guanine-1)-methyltransferase C7R87_3623 PF01245 Ribosomal protein L19 C7R87_3624 PF00561 alpha/beta hydrolase fold C7R87_3625 PF03280 Proteobacterial lipase chaperone protein C7R87_3626 PF16198 tRNA pseudouridylate synthase B C-terminal domain C7R87_3626 PF01509 TruB family pseudouridylate synthase (N terminal domain) C7R87_3626 PF09157 Pseudouridine synthase II TruB, C-terminal C7R87_3627 PF01925 Sulfite exporter TauE/SafE C7R87_3629 PF00892 EamA-like transporter family C7R87_3630 PF00892 EamA-like transporter family C7R87_3631 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7R87_3631 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7R87_3632 PF01565 FAD binding domain C7R87_3632 PF02913 FAD linked oxidases, C-terminal domain C7R87_3634 PF03992 Antibiotic biosynthesis monooxygenase C7R87_3635 PF02525 Flavodoxin-like fold C7R87_3638 PF07690 Major Facilitator Superfamily C7R87_3639 PF12805 FUSC-like inner membrane protein yccS C7R87_3640 PF00080 Copper/zinc superoxide dismutase (SODC) C7R87_3641 PF01594 AI-2E family transporter C7R87_3648 PF00324 Amino acid permease C7R87_3650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C7R87_3650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7R87_3651 PF00202 Aminotransferase class-III C7R87_3652 PF04958 Arginine N-succinyltransferase beta subunit C7R87_3653 PF00171 Aldehyde dehydrogenase family C7R87_3654 PF04996 Succinylarginine dihydrolase C7R87_3655 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C7R87_3661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3661 PF03466 LysR substrate binding domain C7R87_3662 PF00892 EamA-like transporter family C7R87_3664 PF02092 Glycyl-tRNA synthetase beta subunit C7R87_3664 PF05746 DALR anticodon binding domain C7R87_3665 PF02091 Glycyl-tRNA synthetase alpha subunit C7R87_3670 PF00571 CBS domain C7R87_3671 PF04024 PspC domain C7R87_3673 PF12806 Acetyl-CoA dehydrogenase C-terminal like C7R87_3673 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3673 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3673 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3675 PF08501 Shikimate dehydrogenase substrate binding domain C7R87_3675 PF01488 Shikimate / quinate 5-dehydrogenase C7R87_3675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C7R87_3676 PF01218 Coproporphyrinogen III oxidase C7R87_3677 PF00925 GTP cyclohydrolase II C7R87_3678 PF02779 Transketolase, pyrimidine binding domain C7R87_3678 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C7R87_3678 PF02780 Transketolase, C-terminal domain C7R87_3679 PF00459 Inositol monophosphatase family C7R87_3680 PF12343 Cold shock protein DEAD box A C7R87_3680 PF00271 Helicase conserved C-terminal domain C7R87_3680 PF00270 DEAD/DEAH box helicase C7R87_3680 PF03880 DbpA RNA binding domain C7R87_3684 PF00005 ABC transporter C7R87_3685 PF02405 Permease MlaE C7R87_3687 PF05494 MlaC protein C7R87_3689 PF01544 CorA-like Mg2+ transporter protein C7R87_3690 PF03641 Possible lysine decarboxylase C7R87_3691 PF00293 NUDIX domain C7R87_3692 PF00156 Phosphoribosyl transferase domain C7R87_3693 PF00270 DEAD/DEAH box helicase C7R87_3693 PF00271 Helicase conserved C-terminal domain C7R87_3693 PF17191 RecG wedge domain C7R87_3696 PF01553 Acyltransferase C7R87_3698 PF00375 Sodium:dicarboxylate symporter family C7R87_3700 PF01926 50S ribosome-binding GTPase C7R87_3701 PF02082 Transcriptional regulator C7R87_3702 PF00175 Oxidoreductase NAD-binding domain C7R87_3702 PF00970 Oxidoreductase FAD-binding domain C7R87_3702 PF00042 Globin C7R87_3703 PF05872 Bacterial protein of unknown function (DUF853) C7R87_3704 PF01053 Cys/Met metabolism PLP-dependent enzyme C7R87_3705 PF00117 Glutamine amidotransferase class-I C7R87_3706 PF00338 Ribosomal protein S10p/S20e C7R87_3707 PF00297 Ribosomal protein L3 C7R87_3708 PF00573 Ribosomal protein L4/L1 family C7R87_3709 PF00276 Ribosomal protein L23 C7R87_3710 PF00181 Ribosomal Proteins L2, RNA binding domain C7R87_3710 PF03947 Ribosomal Proteins L2, C-terminal domain C7R87_3711 PF00203 Ribosomal protein S19 C7R87_3712 PF00237 Ribosomal protein L22p/L17e C7R87_3713 PF00189 Ribosomal protein S3, C-terminal domain C7R87_3713 PF07650 KH domain C7R87_3714 PF00252 Ribosomal protein L16p/L10e C7R87_3715 PF00831 Ribosomal L29 protein C7R87_3716 PF00366 Ribosomal protein S17 C7R87_3717 PF00238 Ribosomal protein L14p/L23e C7R87_3718 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C7R87_3718 PF00467 KOW motif C7R87_3719 PF00281 Ribosomal protein L5 C7R87_3719 PF00673 ribosomal L5P family C-terminus C7R87_3720 PF00253 Ribosomal protein S14p/S29e C7R87_3721 PF00410 Ribosomal protein S8 C7R87_3722 PF00347 Ribosomal protein L6 C7R87_3723 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C7R87_3724 PF00333 Ribosomal protein S5, N-terminal domain C7R87_3724 PF03719 Ribosomal protein S5, C-terminal domain C7R87_3725 PF00327 Ribosomal protein L30p/L7e C7R87_3726 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C7R87_3727 PF00344 SecY translocase C7R87_3728 PF00444 Ribosomal protein L36 C7R87_3729 PF00416 Ribosomal protein S13/S18 C7R87_3730 PF00411 Ribosomal protein S11 C7R87_3731 PF00163 Ribosomal protein S4/S9 N-terminal domain C7R87_3731 PF01479 S4 domain C7R87_3732 PF01000 RNA polymerase Rpb3/RpoA insert domain C7R87_3732 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C7R87_3732 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C7R87_3733 PF01196 Ribosomal protein L17 C7R87_3734 PF00743 Flavin-binding monooxygenase-like C7R87_3735 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3736 PF03937 Flavinator of succinate dehydrogenase C7R87_3742 PF09526 Probable metal-binding protein (DUF2387) C7R87_3743 PF01432 Peptidase family M3 C7R87_3744 PF17876 Cold shock domain C7R87_3744 PF08206 Ribonuclease B OB domain C7R87_3744 PF00575 S1 RNA binding domain C7R87_3744 PF00773 RNB domain C7R87_3744 PF08461 Ribonuclease R winged-helix domain C7R87_3753 PF01557 Fumarylacetoacetate (FAA) hydrolase family C7R87_3754 PF12833 Helix-turn-helix domain C7R87_3755 PF00892 EamA-like transporter family C7R87_3756 PF03631 Virulence factor BrkB C7R87_3757 PF03358 NADPH-dependent FMN reductase C7R87_3762 PF02130 Uncharacterized protein family UPF0054 C7R87_3763 PF02562 PhoH-like protein C7R87_3764 PF00919 Uncharacterized protein family UPF0004 C7R87_3764 PF04055 Radical SAM superfamily C7R87_3764 PF01938 TRAM domain C7R87_3765 PF01551 Peptidase family M23 C7R87_3765 PF10145 Phage-related minor tail protein C7R87_3765 PF01464 Transglycosylase SLT domain C7R87_3767 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C7R87_3767 PF00056 lactate/malate dehydrogenase, NAD binding domain C7R87_3771 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C7R87_3772 PF01066 CDP-alcohol phosphatidyltransferase C7R87_3781 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3781 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3781 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3782 PF17932 Tetracyclin repressor-like, C-terminal domain C7R87_3782 PF00440 Bacterial regulatory proteins, tetR family C7R87_3785 PF01039 Carboxyl transferase domain C7R87_3786 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3786 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3786 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3788 PF00289 Biotin carboxylase, N-terminal domain C7R87_3788 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7R87_3788 PF00364 Biotin-requiring enzyme C7R87_3788 PF02785 Biotin carboxylase C-terminal domain C7R87_3790 PF04386 Stringent starvation protein B C7R87_3791 PF13417 Glutathione S-transferase, N-terminal domain C7R87_3791 PF00043 Glutathione S-transferase, C-terminal domain C7R87_3792 PF00380 Ribosomal protein S9/S16 C7R87_3793 PF00572 Ribosomal protein L13 C7R87_3794 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C7R87_3795 PF00398 Ribosomal RNA adenine dimethylase C7R87_3796 PF00149 Calcineurin-like phosphoesterase C7R87_3800 PF01926 50S ribosome-binding GTPase C7R87_3800 PF13167 GTP-binding GTPase N-terminal C7R87_3800 PF16360 GTP-binding GTPase Middle Region C7R87_3801 PF16360 GTP-binding GTPase Middle Region C7R87_3801 PF13167 GTP-binding GTPase N-terminal C7R87_3801 PF01926 50S ribosome-binding GTPase C7R87_3803 PF13091 PLD-like domain C7R87_3804 PF10518 TAT (twin-arginine translocation) pathway signal sequence C7R87_3804 PF00149 Calcineurin-like phosphoesterase C7R87_3805 PF01389 OmpA-like transmembrane domain C7R87_3805 PF00691 OmpA family C7R87_3806 PF00990 Diguanylate cyclase, GGDEF domain C7R87_3806 PF03707 Bacterial signalling protein N terminal repeat C7R87_3806 PF00563 EAL domain C7R87_3816 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7R87_3816 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7R87_3818 PF04273 Putative phosphatase (DUF442) C7R87_3818 PF00753 Metallo-beta-lactamase superfamily C7R87_3819 PF00561 alpha/beta hydrolase fold C7R87_3820 PF00085 Thioredoxin C7R87_3821 PF03061 Thioesterase superfamily C7R87_3823 PF04461 Protein of unknown function (DUF520) C7R87_3825 PF01266 FAD dependent oxidoreductase C7R87_3825 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C7R87_3827 PF03795 YCII-related domain C7R87_3828 PF04279 Intracellular septation protein A C7R87_3829 PF02811 PHP domain C7R87_3830 PF01062 Bestrophin, RFP-TM, chloride channel C7R87_3831 PF04002 RadC-like JAB domain C7R87_3832 PF02441 Flavoprotein C7R87_3832 PF04127 DNA / pantothenate metabolism flavoprotein C7R87_3833 PF02355 Protein export membrane protein C7R87_3833 PF07549 SecD/SecF GG Motif C7R87_3834 PF07549 SecD/SecF GG Motif C7R87_3834 PF13721 SecD export protein N-terminal TM region C7R87_3834 PF02355 Protein export membrane protein C7R87_3835 PF02699 Preprotein translocase subunit C7R87_3836 PF01702 Queuine tRNA-ribosyltransferase C7R87_3839 PF02547 Queuosine biosynthesis protein C7R87_3842 PF13737 Transposase DDE domain C7R87_3843 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3843 PF07689 KaiB domain C7R87_3844 PF03710 Glutamate-ammonia ligase adenylyltransferase C7R87_3844 PF08335 GlnD PII-uridylyltransferase C7R87_3845 PF01063 Amino-transferase class IV C7R87_3848 PF01522 Polysaccharide deacetylase C7R87_3849 PF00535 Glycosyl transferase family 2 C7R87_3850 PF13439 Glycosyltransferase Family 4 C7R87_3850 PF00534 Glycosyl transferases group 1 C7R87_3858 PF17102 Stealth protein CR3, conserved region 3 C7R87_3858 PF11380 Stealth protein CR2, conserved region 2 C7R87_3858 PF17101 Stealth protein CR1, conserved region 1 C7R87_3859 PF00152 tRNA synthetases class II (D, K and N) C7R87_3859 PF02938 GAD domain C7R87_3859 PF01336 OB-fold nucleic acid binding domain C7R87_3864 PF00593 TonB dependent receptor C7R87_3864 PF07715 TonB-dependent Receptor Plug Domain C7R87_3868 PF06146 Phosphate-starvation-inducible E C7R87_3869 PF02798 Glutathione S-transferase, N-terminal domain C7R87_3869 PF00043 Glutathione S-transferase, C-terminal domain C7R87_3870 PF03466 LysR substrate binding domain C7R87_3870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7R87_3871 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3871 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3871 PF12806 Acetyl-CoA dehydrogenase C-terminal like C7R87_3871 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3872 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7R87_3872 PF02770 Acyl-CoA dehydrogenase, middle domain C7R87_3872 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7R87_3872 PF12806 Acetyl-CoA dehydrogenase C-terminal like C7R87_3874 PF00672 HAMP domain C7R87_3874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7R87_3874 PF00512 His Kinase A (phospho-acceptor) domain C7R87_3875 PF00486 Transcriptional regulatory protein, C terminal C7R87_3875 PF00072 Response regulator receiver domain C7R87_3876 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C7R87_3880 PF01923 Cobalamin adenosyltransferase C7R87_3881 PF07715 TonB-dependent Receptor Plug Domain C7R87_3881 PF00593 TonB dependent receptor C7R87_3882 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C7R87_3883 PF00291 Pyridoxal-phosphate dependent enzyme C7R87_3889 PF00290 Tryptophan synthase alpha chain C7R87_3890 PF01039 Carboxyl transferase domain C7R87_3891 PF02875 Mur ligase family, glutamate ligase domain C7R87_3891 PF08245 Mur ligase middle domain C7R87_3894 PF00753 Metallo-beta-lactamase superfamily C7R87_3895 PF00578 AhpC/TSA family C7R87_3895 PF10417 C-terminal domain of 1-Cys peroxiredoxin C7R87_3896 PF02810 SEC-C motif C7R87_3896 PF01043 SecA preprotein cross-linking domain C7R87_3896 PF07516 SecA Wing and Scaffold domain C7R87_3896 PF07517 SecA DEAD-like domain C7R87_3898 PF07690 Major Facilitator Superfamily C7R87_3898 PF00083 Sugar (and other) transporter C7R87_3899 PF03006 Haemolysin-III related C7R87_3905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7R87_3905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7R87_3905 PF00378 Enoyl-CoA hydratase/isomerase C7R87_3906 PF02803 Thiolase, C-terminal domain C7R87_3906 PF00108 Thiolase, N-terminal domain C7R87_3907 PF02311 AraC-like ligand binding domain C7R87_3907 PF12833 Helix-turn-helix domain C7R87_3908 PF02515 CoA-transferase family III C7R87_3909 PF04966 Carbohydrate-selective porin, OprB family C7R87_3910 PF01011 PQQ enzyme repeat C7R87_3911 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7R87_3911 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7R87_3913 PF00893 Small Multidrug Resistance protein C7R87_3915 PF00108 Thiolase, N-terminal domain C7R87_3915 PF02803 Thiolase, C-terminal domain C7R87_3917 PF00691 OmpA family C7R87_3917 PF13505 Outer membrane protein beta-barrel domain C7R87_3919 PF01139 tRNA-splicing ligase RtcB C7R87_3920 PF00324 Amino acid permease C7R87_3921 PF08468 Methyltransferase small domain N-terminal C7R87_3921 PF05175 Methyltransferase small domain C7R87_3922 PF00860 Permease family C7R87_3925 PF01741 Large-conductance mechanosensitive channel, MscL C7R87_3928 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C7R87_3928 PF06827 Zinc finger found in FPG and IleRS C7R87_3928 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C7R87_3929 PF02245 Methylpurine-DNA glycosylase (MPG) C7R87_3930 PF07715 TonB-dependent Receptor Plug Domain C7R87_3930 PF00593 TonB dependent receptor C7R87_3931 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7R87_3932 PF03547 Membrane transport protein C7R87_3934 PF10411 Disulfide bond isomerase protein N-terminus C7R87_3934 PF13098 Thioredoxin-like domain C7R87_3935 PF01571 Aminomethyltransferase folate-binding domain C7R87_3937 PF04343 Protein of unknown function, DUF488 C7R87_3938 PF08274 PhnA Zinc-Ribbon C7R87_3938 PF03831 PhnA domain C7R87_3939 PF07411 Domain of unknown function (DUF1508) C7R87_3940 PF03129 Anticodon binding domain C7R87_3940 PF04073 Aminoacyl-tRNA editing domain C7R87_3940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7R87_3941 PF00873 AcrB/AcrD/AcrF family C7R87_3944 PF00072 Response regulator receiver domain C7R87_3945 PF00072 Response regulator receiver domain C7R87_3946 PF01584 CheW-like domain C7R87_3947 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7R87_3947 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C7R87_3951 PF01807 CHC2 zinc finger C7R87_3951 PF10410 DnaB-helicase binding domain of primase C7R87_3951 PF08275 DNA primase catalytic core, N-terminal domain C7R87_3959 PF00625 Guanylate kinase C7R87_3964 PF00589 Phage integrase family C7R87_3964 PF02899 Phage integrase, N-terminal SAM-like domain C7R87_3971 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7R87_3971 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7R87_3971 PF14579 Helix-hairpin-helix motif C7R87_3971 PF02811 PHP domain C7R87_3975 PF00154 recA bacterial DNA recombination protein C7R87_3984 PF13476 AAA domain C7R87_3989 PF03477 ATP cone domain C7R87_3989 PF00317 Ribonucleotide reductase, all-alpha domain C7R87_3989 PF02867 Ribonucleotide reductase, barrel domain C7R87_3992 PF13610 DDE domain C7R87_3994 PF01636 Phosphotransferase enzyme family C7R87_3998 PF01636 Phosphotransferase enzyme family C7R87_4002 PF00268 Ribonucleotide reductase, small chain C7R87_4007 PF00692 dUTPase C7R87_4023 PF00929 Exonuclease C7R87_4050 PF02195 ParB-like nuclease domain C7R87_4051 PF00005 ABC transporter C7R87_4051 PF09383 NIL domain C7R87_4070 PF00877 NlpC/P60 family C7R87_4083 PF05816 Toxic anion resistance protein (TelA) C7R87_4086 PF02195 ParB-like nuclease domain C7R87_4086 PF17762 HTH domain found in ParB protein C7R87_4087 PF13614 AAA domain C7R87_4097 PF00816 H-NS histone family C7R87_4099 PF00905 Penicillin binding protein transpeptidase domain C7R87_4102 PF00565 Staphylococcal nuclease homologue C7R87_4114 PF13438 Domain of unknown function (DUF4113) C7R87_4114 PF11799 impB/mucB/samB family C-terminal domain C7R87_4114 PF00817 impB/mucB/samB family C7R87_4114 PF11798 IMS family HHH motif C7R87_4118 PF06122 Conjugative relaxosome accessory transposon protein C7R87_4121 PF06986 Type-1V conjugative transfer system mating pair stabilisation C7R87_4123 PF06834 TraU protein C7R87_4129 PF13098 Thioredoxin-like domain C7R87_4129 PF10411 Disulfide bond isomerase protein N-terminus C7R87_4136 PF01464 Transglycosylase SLT domain C7R87_4139 PF02796 Helix-turn-helix domain of resolvase C7R87_4139 PF00239 Resolvase, N terminal domain C7R87_4141 PF13936 Helix-turn-helix domain C7R87_4141 PF00665 Integrase core domain C7R87_4146 PF07057 DNA helicase TraI C7R87_4146 PF18340 DNA relaxase TraI 2B/2B-like domain C7R87_4146 PF08751 TrwC relaxase C7R87_4146 PF18272 single-stranded DNA binding TraI N-terminal subdomain C7R87_4153 PF00226 DnaJ domain C7R87_4153 PF01556 DnaJ C terminal domain C7R87_4153 PF00684 DnaJ central domain