locus-tag	class	description
C7R87_0014	COG5510	response to toxic substance
C7R87_0016	COG2832	Protein of unknown function (DUF454)
C7R87_0017	COG1376	ErfK ybiS ycfS ynhG family protein
C7R87_0027	COG1289	transmembrane transporter activity
C7R87_0028	COG2814	Major facilitator Superfamily
C7R87_0032	COG1115	amino acid carrier protein
C7R87_0033	COG1752	Esterase of the alpha-beta hydrolase superfamily
C7R87_0034	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C7R87_0035	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
C7R87_0041	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C7R87_0043	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C7R87_0044	COG1077	Cell shape determining protein MreB Mrl
C7R87_0045	COG1792	Involved in formation and maintenance of cell shape
C7R87_0047	COG0424	maF-like protein
C7R87_0048	COG1530	ribonuclease E activity
C7R87_0050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C7R87_0054	COG2249	NAD(P)H dehydrogenase (quinone) activity
C7R87_0059	COG2207	Transcriptional regulator
C7R87_0095	COG5410	chromosome segregation
C7R87_0137	COG0582	viral genome integration into host DNA
C7R87_0139	COG1113	amino acid transport
C7R87_0141	COG2828	Protein conserved in bacteria
C7R87_0142	COG0142	geranyltranstransferase activity
C7R87_0143	COG2315	Protein conserved in bacteria
C7R87_0146	COG1752	Esterase of the alpha-beta hydrolase superfamily
C7R87_0150	COG2194	sulfuric ester hydrolase activity
C7R87_0151	COG0745	RESPONSE REGULATOR receiver
C7R87_0152	COG0642	Histidine kinase
C7R87_0154	COG0004	ammonium transporteR
C7R87_0156	COG0583	DNA-binding transcription factor activity
C7R87_0160	COG0525	valine-tRNA ligase activity
C7R87_0162	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_0164	COG0393	Putative heavy-metal-binding
C7R87_0165	COG0393	Putative heavy-metal-binding
C7R87_0166	COG1538	Outer membrane efflux protein
C7R87_0168	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_0169	COG0671	phosphoesterase, PA-phosphatase related
C7R87_0174	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
C7R87_0177	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
C7R87_0177	COG1648	precorrin-2 dehydrogenase activity
C7R87_0178	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
C7R87_0179	COG1733	regulation of RNA biosynthetic process
C7R87_0181	COG0531	amino acid
C7R87_0184	COG0321	lipoyl(octanoyl) transferase activity
C7R87_0185	COG2921	Belongs to the UPF0250 family
C7R87_0193	COG2009	succinate dehydrogenase
C7R87_0194	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
C7R87_0195	COG1053	succinate dehydrogenase
C7R87_0196	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C7R87_0200	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C7R87_0204	COG2354	Protein conserved in bacteria
C7R87_0205	COG2321	neutral zinc metallopeptidase
C7R87_0209	COG2843	Capsule synthesis protein
C7R87_0212	COG0589	response to stress
C7R87_0216	COG0505	Belongs to the CarA family
C7R87_0221	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C7R87_0222	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C7R87_0232	COG0477	Major facilitator Superfamily
C7R87_0233	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C7R87_0237	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C7R87_0243	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C7R87_0244	COG0584	glycerophosphoryl diester phosphodiesterase
C7R87_0248	COG0741	lytic transglycosylase activity
C7R87_0252	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C7R87_0255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C7R87_0260	COG0778	Nitroreductase
C7R87_0263	COG1929	Belongs to the glycerate kinase type-1 family
C7R87_0264	COG0243	molybdopterin cofactor binding
C7R87_0265	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
C7R87_0266	COG3339	Conserved Protein
C7R87_0268	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
C7R87_0272	COG1113	amino acid transport
C7R87_0274	COG0019	diaminopimelate decarboxylase activity
C7R87_0276	COG1280	lysine exporter protein (LysE YggA)
C7R87_0277	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
C7R87_0283	COG0463	Glycosyl transferase, family 2
C7R87_0287	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_0294	COG4591	ABC-type transport system involved in lipoprotein release permease component
C7R87_0295	COG1136	(ABC) transporter
C7R87_0296	COG0658	competence protein
C7R87_0296	COG2333	competence protein COMEC
C7R87_0298	COG0616	signal peptide processing
C7R87_0298	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
C7R87_0299	COG0596	Alpha beta hydrolase
C7R87_0300	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
C7R87_0302	COG0628	permease
C7R87_0312	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C7R87_0316	COG0823	Involved in the tonB-independent uptake of proteins
C7R87_0320	COG0824	Thioesterase
C7R87_0321	COG1473	amidohydrolase
C7R87_0325	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C7R87_0325	COG0047	phosphoribosylformylglycinamidine synthase activity
C7R87_0326	COG2814	Major facilitator Superfamily
C7R87_0329	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C7R87_0330	COG1024	Enoyl-CoA hydratase
C7R87_0331	COG1056	cytidyltransferase-related domain
C7R87_0331	COG1051	belongs to the nudix hydrolase family
C7R87_0333	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C7R87_0336	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
C7R87_0339	COG4625	pathogenesis
C7R87_0340	COG0583	DNA-binding transcription factor activity
C7R87_0341	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C7R87_0342	COG4208	sulfate ABC transporter
C7R87_0343	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C7R87_0346	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C7R87_0347	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C7R87_0348	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
C7R87_0352	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C7R87_0355	COG0681	Belongs to the peptidase S26 family
C7R87_0358	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
C7R87_0360	COG1381	Involved in DNA repair and RecF pathway recombination
C7R87_0361	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
C7R87_0363	COG4221	oxidoreductase activity
C7R87_0366	COG4221	oxidoreductase activity
C7R87_0375	COG0556	nucleotide-excision repair
C7R87_0387	COG2070	2-Nitropropane dioxygenase
C7R87_0393	COG1215	transferase activity, transferring glycosyl groups
C7R87_0396	COG0415	Belongs to the DNA photolyase family
C7R87_0398	COG1252	NADH dehydrogenase
C7R87_0399	COG1686	Belongs to the peptidase S11 family
C7R87_0402	COG1187	pseudouridine synthase activity
C7R87_0407	COG0477	Major facilitator Superfamily
C7R87_0408	COG0583	DNA-binding transcription factor activity
C7R87_0411	COG0612	Peptidase, M16
C7R87_0416	COG0352	thiamine-phosphate diphosphorylase activity
C7R87_0423	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C7R87_0426	COG1309	transcriptional regulator
C7R87_0428	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C7R87_0429	COG0076	glutamate decarboxylase activity
C7R87_0431	COG1522	sequence-specific DNA binding
C7R87_0432	COG3961	Belongs to the TPP enzyme family
C7R87_0433	COG1113	amino acid transport
C7R87_0434	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C7R87_0435	COG0573	inorganic phosphate transmembrane transporter activity
C7R87_0437	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C7R87_0438	COG0616	signal peptide processing
C7R87_0445	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C7R87_0446	COG1686	Belongs to the peptidase S11 family
C7R87_0451	COG0583	DNA-binding transcription factor activity
C7R87_0452	COG1067	ATP-dependent peptidase activity
C7R87_0461	COG1966	Carbon starvation protein
C7R87_0462	COG2879	small protein
C7R87_0471	COG2508	Transcriptional regulator
C7R87_0471	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
C7R87_0475	COG1113	amino acid transport
C7R87_0476	COG0583	DNA-binding transcription factor activity
C7R87_0477	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C7R87_0479	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C7R87_0482	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C7R87_0483	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C7R87_0483	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
C7R87_0490	COG2814	Major facilitator Superfamily
C7R87_0491	COG4948	Mandelate Racemase Muconate Lactonizing
C7R87_0493	COG1309	transcriptional regulator
C7R87_0497	COG1741	Belongs to the pirin family
C7R87_0500	COG2964	Protein conserved in bacteria
C7R87_0503	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C7R87_0504	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C7R87_0505	COG4605	iron ion homeostasis
C7R87_0506	COG4604	ABC transporter, ATP-binding protein
C7R87_0507	COG4607	ABC-type enterochelin transport system periplasmic component
C7R87_0508	COG4774	siderophore transport
C7R87_0510	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C7R87_0511	COG1021	2,3-dihydroxybenzoate-AMP ligase
C7R87_0512	COG1535	isochorismatase
C7R87_0512	COG3433	isochorismatase activity
C7R87_0515	COG1132	(ABC) transporter
C7R87_0517	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
C7R87_0519	COG1169	isochorismate synthase
C7R87_0522	COG3739	integral membrane protein
C7R87_0530	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C7R87_0536	COG0308	aminopeptidase N
C7R87_0537	COG0512	Glutamine amidotransferase of anthranilate synthase
C7R87_0600	COG0739	heme binding
C7R87_0610	COG2194	sulfuric ester hydrolase activity
C7R87_0616	COG0006	proline dipeptidase activity
C7R87_0617	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C7R87_0618	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C7R87_0623	COG1279	arginine transmembrane transporter activity
C7R87_0624	COG0583	DNA-binding transcription factor activity
C7R87_0632	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C7R87_0633	COG1388	LysM domain
C7R87_0633	COG0741	lytic transglycosylase activity
C7R87_0633	COG0741	lytic transglycosylase activity
C7R87_0633	COG1388	LysM domain
C7R87_0635	COG4174	ABC transporter (Permease)
C7R87_0636	COG4239	(ABC) transporter, permease
C7R87_0637	COG4172	Belongs to the ABC transporter superfamily
C7R87_0641	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C7R87_0643	COG3706	GGDEF domain
C7R87_0643	COG2203	Gaf domain
C7R87_0643	COG4251	negative regulation of phosphorylation
C7R87_0643	COG5001	Diguanylate cyclase
C7R87_0645	COG1902	pentaerythritol trinitrate reductase activity
C7R87_0645	COG0446	pyridine nucleotide-disulphide oxidoreductase
C7R87_0648	COG4269	membrane
C7R87_0653	COG3501	Rhs element vgr protein
C7R87_0654	COG3209	COG3209 Rhs family protein
C7R87_0659	COG1113	amino acid transport
C7R87_0661	COG0531	amino acid
C7R87_0665	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0669	COG1113	amino acid transport
C7R87_0671	COG1113	amino acid transport
C7R87_0674	COG0697	spore germination
C7R87_0675	COG2721	sulfolactate sulfo-lyase activity
C7R87_0676	COG2271	Major facilitator Superfamily
C7R87_0677	COG4948	Mandelate Racemase Muconate Lactonizing
C7R87_0679	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0680	COG2186	Transcriptional regulator
C7R87_0685	COG1960	acyl-CoA dehydrogenase activity
C7R87_0687	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0688	COG1024	Enoyl-CoA hydratase
C7R87_0689	COG2814	Major facilitator Superfamily
C7R87_0692	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C7R87_0695	COG1262	PFAM Formylglycine-generating sulfatase enzyme
C7R87_0706	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C7R87_0708	COG0583	DNA-binding transcription factor activity
C7R87_0709	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
C7R87_0710	COG2072	flavoprotein involved in K transport
C7R87_0721	COG2746	aminoglycoside 3-N-acetyltransferase activity
C7R87_0722	COG1660	Displays ATPase and GTPase activities
C7R87_0727	COG2252	PERMEase
C7R87_0728	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C7R87_0729	COG3038	cytochrome b561
C7R87_0731	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
C7R87_0735	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C7R87_0737	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
C7R87_0740	COG0667	Aldo Keto reductase
C7R87_0742	COG1765	OsmC-like protein
C7R87_0752	COG2885	chlorophyll binding
C7R87_0754	COG0625	glutathione transferase activity
C7R87_0755	COG0220	tRNA (guanine-N7-)-methyltransferase activity
C7R87_0759	COG3634	alkyl hydroperoxide reductase activity
C7R87_0761	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
C7R87_0763	COG0450	alkyl hydroperoxide reductase
C7R87_0764	COG1643	Atp-dependent helicase
C7R87_0767	COG2814	Major facilitator Superfamily
C7R87_0768	COG3135	benzoate transporter
C7R87_0769	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_0770	COG0543	2 iron, 2 sulfur cluster binding
C7R87_0770	COG0633	Ferredoxin
C7R87_0771	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
C7R87_0772	COG4638	Rieske (2fe-2S)
C7R87_0773	COG0583	DNA-binding transcription factor activity
C7R87_0783	COG1570	exodeoxyribonuclease VII activity
C7R87_0789	COG1280	lysine exporter protein (LysE YggA)
C7R87_0790	COG1278	Cold shock
C7R87_0800	COG2814	Major facilitator Superfamily
C7R87_0801	COG1733	regulation of RNA biosynthetic process
C7R87_0808	COG0517	IMP dehydrogenase activity
C7R87_0808	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
C7R87_0809	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
C7R87_0811	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
C7R87_0812	COG1137	ATPase activity
C7R87_0821	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
C7R87_0825	COG1522	sequence-specific DNA binding
C7R87_0827	COG5006	permease, DMT superfamily
C7R87_0829	COG1560	Kdo2-lipid A biosynthetic process
C7R87_0832	COG2814	Major facilitator Superfamily
C7R87_0836	COG1250	3-hydroxyacyl-CoA dehydrogenase
C7R87_0841	COG3501	Rhs element vgr protein
C7R87_0842	COG3209	COG3209 Rhs family protein
C7R87_0845	COG0583	DNA-binding transcription factor activity
C7R87_0846	COG1914	H( )-stimulated, divalent metal cation uptake system
C7R87_0850	COG4770	biotin carboxylase activity
C7R87_0851	COG0038	chloride channel
C7R87_0856	COG1309	transcriptional regulator
C7R87_0858	COG1063	alcohol dehydrogenase
C7R87_0862	COG0439	Biotin carboxylase
C7R87_0863	COG2249	NAD(P)H dehydrogenase (quinone) activity
C7R87_0864	COG1733	regulation of RNA biosynthetic process
C7R87_0868	COG0864	Transcriptional regulator
C7R87_0870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C7R87_0871	COG1116	anion transmembrane transporter activity
C7R87_0885	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C7R87_0885	COG2885	chlorophyll binding
C7R87_0893	COG0583	DNA-binding transcription factor activity
C7R87_0895	COG0590	tRNA wobble adenosine to inosine editing
C7R87_0896	COG2807	transmembrane transport
C7R87_0899	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C7R87_0900	COG0789	Transcriptional regulator
C7R87_0904	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C7R87_0908	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C7R87_0910	COG0446	pyridine nucleotide-disulphide oxidoreductase
C7R87_0915	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0916	COG0531	amino acid
C7R87_0917	COG1760	l-serine dehydratase
C7R87_0918	COG2030	dehydratase
C7R87_0918	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0919	COG3396	Phenylacetate-CoA oxygenase
C7R87_0920	COG3460	Phenylacetate-CoA oxygenase
C7R87_0921	COG3396	Phenylacetate-CoA oxygenase
C7R87_0922	COG2151	metal-sulfur cluster biosynthetic enzyme
C7R87_0923	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C7R87_0924	COG1024	Enoyl-CoA hydratase
C7R87_0925	COG1024	Enoyl-CoA hydratase
C7R87_0926	COG1250	3-hydroxyacyl-CoA dehydrogenase
C7R87_0927	COG0183	Belongs to the thiolase family
C7R87_0928	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
C7R87_0929	COG3327	negative regulation of DNA-templated transcription, initiation
C7R87_0931	COG2050	protein possibly involved in aromatic compounds catabolism
C7R87_0938	COG0753	catalase activity
C7R87_0939	COG3038	cytochrome b561
C7R87_0943	COG2267	carboxylic ester hydrolase activity
C7R87_0944	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_0945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C7R87_0946	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0948	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
C7R87_0950	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_0951	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C7R87_0952	COG0583	DNA-binding transcription factor activity
C7R87_0954	COG1414	Transcriptional regulator
C7R87_0955	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C7R87_0957	COG1840	ABC-type Fe3 transport system, periplasmic component
C7R87_0958	COG3842	ATPase activity
C7R87_0961	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
C7R87_0962	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C7R87_0963	COG2814	Major facilitator Superfamily
C7R87_0964	COG1960	acyl-CoA dehydrogenase activity
C7R87_0967	COG1024	Enoyl-CoA hydratase
C7R87_0969	COG2814	Major facilitator Superfamily
C7R87_0971	COG0183	Belongs to the thiolase family
C7R87_0972	COG1250	3-hydroxyacyl-CoA dehydrogenase
C7R87_0973	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_0974	COG1024	Enoyl-CoA hydratase
C7R87_0975	COG1960	acyl-CoA dehydrogenase activity
C7R87_0976	COG2814	Major facilitator Superfamily
C7R87_0977	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C7R87_0978	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C7R87_0980	COG2814	Major facilitator Superfamily
C7R87_0982	COG1960	acyl-CoA dehydrogenase activity
C7R87_0985	COG0583	DNA-binding transcription factor activity
C7R87_0988	COG1024	Enoyl-CoA hydratase
C7R87_0989	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C7R87_0990	COG1960	acyl-CoA dehydrogenase activity
C7R87_0991	COG1309	transcriptional regulator
C7R87_0992	COG0318	PFAM AMP-dependent synthetase and ligase
C7R87_0996	COG0583	DNA-binding transcription factor activity
C7R87_1006	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1010	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C7R87_1014	COG0784	Response regulator, receiver
C7R87_1014	COG2205	protein histidine kinase activity
C7R87_1018	COG0765	amino acid transport
C7R87_1019	COG0765	amino acid transport
C7R87_1020	COG1126	abc transporter atp-binding protein
C7R87_1021	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C7R87_1022	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C7R87_1025	COG1280	lysine exporter protein (LysE YggA)
C7R87_1027	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C7R87_1028	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C7R87_1029	COG1045	serine acetyltransferase
C7R87_1032	COG0583	DNA-binding transcription factor activity
C7R87_1033	COG0625	glutathione transferase activity
C7R87_1034	COG0625	glutathione transferase activity
C7R87_1035	COG0583	DNA-binding transcription factor activity
C7R87_1037	COG1346	cytolysis
C7R87_1041	COG2814	Major facilitator Superfamily
C7R87_1044	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
C7R87_1045	COG3052	prosthetic group binding
C7R87_1049	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
C7R87_1053	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C7R87_1055	COG1294	oxidase, subunit
C7R87_1056	COG1271	oxidase subunit
C7R87_1061	COG0477	Major facilitator Superfamily
C7R87_1065	COG4521	taurine ABC transporter
C7R87_1066	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
C7R87_1067	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C7R87_1068	COG2175	clavaminate synthase activity
C7R87_1070	COG1953	Uracil, thiamine, allantoin
C7R87_1072	COG0583	DNA-binding transcription factor activity
C7R87_1074	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
C7R87_1077	COG0640	Transcriptional regulator
C7R87_1078	COG0798	PFAM Bile acid sodium symporter
C7R87_1079	COG0583	DNA-binding transcription factor activity
C7R87_1083	COG3634	alkyl hydroperoxide reductase activity
C7R87_1091	COG0436	Aminotransferase
C7R87_1093	COG0386	Belongs to the glutathione peroxidase family
C7R87_1101	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C7R87_1108	COG0012	GTP binding
C7R87_1109	COG2011	ABC-type metal ion transport system permease component
C7R87_1110	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C7R87_1112	COG1464	Belongs to the NlpA lipoprotein family
C7R87_1119	COG0765	amino acid transport
C7R87_1120	COG0765	amino acid transport
C7R87_1121	COG1126	abc transporter atp-binding protein
C7R87_1123	COG1522	sequence-specific DNA binding
C7R87_1126	COG1309	transcriptional regulator
C7R87_1132	COG0583	DNA-binding transcription factor activity
C7R87_1134	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
C7R87_1136	COG0697	spore germination
C7R87_1141	COG3188	usher protein
C7R87_1142	COG3121	Chaperone
C7R87_1143	COG3539	Fimbrial protein
C7R87_1148	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C7R87_1148	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C7R87_1158	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C7R87_1160	COG2353	YceI-like domain
C7R87_1162	COG3698	Phosphodiester glycosidase
C7R87_1165	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
C7R87_1166	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C7R87_1166	COG0506	proline dehydrogenase activity
C7R87_1166	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C7R87_1169	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C7R87_1170	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C7R87_1177	COG1132	(ABC) transporter
C7R87_1178	COG3122	Protein conserved in bacteria
C7R87_1179	COG3619	membrane
C7R87_1181	COG0640	Transcriptional regulator
C7R87_1183	COG2850	peptidyl-arginine hydroxylation
C7R87_1184	COG0424	maF-like protein
C7R87_1188	COG0191	fructose-bisphosphate aldolase activity
C7R87_1189	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C7R87_1192	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C7R87_1194	COG1192	Involved in chromosome partitioning
C7R87_1195	COG1475	DNA binding
C7R87_1196	COG0811	peptide transport
C7R87_1198	COG1132	(ABC) transporter
C7R87_1199	COG1663	tetraacyldisaccharide 4'-kinase activity
C7R87_1203	COG0084	hydrolase, TatD family'
C7R87_1206	COG2165	general secretion pathway protein
C7R87_1212	COG0590	tRNA wobble adenosine to inosine editing
C7R87_1216	COG0776	regulation of translation
C7R87_1222	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
C7R87_1223	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
C7R87_1235	COG0339	signal peptide processing
C7R87_1238	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C7R87_1245	COG0702	epimerase
C7R87_1246	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
C7R87_1250	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
C7R87_1256	COG0316	Belongs to the HesB IscA family
C7R87_1257	COG0822	iron-sulfur transferase activity
C7R87_1262	COG0776	regulation of translation
C7R87_1263	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C7R87_1264	COG2207	Transcriptional regulator
C7R87_1265	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C7R87_1266	COG1960	acyl-CoA dehydrogenase activity
C7R87_1267	COG1960	acyl-CoA dehydrogenase activity
C7R87_1270	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C7R87_1274	COG4264	IucA IucC family
C7R87_1275	COG4264	IucA IucC family
C7R87_1287	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
C7R87_1291	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C7R87_1292	COG0730	response to heat
C7R87_1295	COG4773	Receptor
C7R87_1297	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C7R87_1300	COG1131	(ABC) transporter
C7R87_1301	COG0842	Transport permease protein
C7R87_1302	COG0842	Transport permease protein
C7R87_1314	COG2226	methyltransferase
C7R87_1319	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
C7R87_1326	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C7R87_1328	COG0133	tryptophan synthase activity
C7R87_1331	COG3706	GGDEF domain
C7R87_1336	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C7R87_1337	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C7R87_1338	COG0022	dehydrogenase e1 component
C7R87_1339	COG0508	dehydrogenase complex catalyzes the overall conversion of
C7R87_1340	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C7R87_1343	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1344	COG1063	alcohol dehydrogenase
C7R87_1345	COG3781	membrane
C7R87_1347	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C7R87_1347	COG3453	Protein conserved in bacteria
C7R87_1349	COG0730	response to heat
C7R87_1352	COG2207	Transcriptional regulator
C7R87_1352	COG3708	Transcriptional regulator
C7R87_1353	COG1733	regulation of RNA biosynthetic process
C7R87_1354	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
C7R87_1359	COG4521	taurine ABC transporter
C7R87_1360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C7R87_1364	COG0477	Major facilitator Superfamily
C7R87_1366	COG1027	Aspartate ammonia-lyase
C7R87_1369	COG0583	DNA-binding transcription factor activity
C7R87_1370	COG0583	DNA-binding transcription factor activity
C7R87_1371	COG0183	Belongs to the thiolase family
C7R87_1372	COG2031	fatty acid transporter
C7R87_1373	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C7R87_1375	COG0583	DNA-binding transcription factor activity
C7R87_1377	COG2610	gluconate transmembrane transporter activity
C7R87_1378	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1379	COG2207	Transcriptional regulator
C7R87_1381	COG0412	Dienelactone hydrolase
C7R87_1382	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1384	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_1387	COG0543	2 iron, 2 sulfur cluster binding
C7R87_1387	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C7R87_1388	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
C7R87_1389	COG4638	Rieske (2fe-2S)
C7R87_1391	COG0725	ABC transporter, periplasmic molybdate-binding protein
C7R87_1392	COG4149	molybdate abc transporter
C7R87_1393	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
C7R87_1394	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1395	COG1535	isochorismatase
C7R87_1395	COG3433	isochorismatase activity
C7R87_1408	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C7R87_1412	COG0753	catalase activity
C7R87_1414	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
C7R87_1419	COG3539	Fimbrial protein
C7R87_1422	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C7R87_1426	COG2072	flavoprotein involved in K transport
C7R87_1428	COG1538	Outer membrane efflux protein
C7R87_1429	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C7R87_1430	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_1431	COG0745	RESPONSE REGULATOR receiver
C7R87_1432	COG2205	protein histidine kinase activity
C7R87_1434	COG2207	Transcriptional regulator
C7R87_1437	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1447	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
C7R87_1472	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C7R87_1476	COG1120	ATPase activity
C7R87_1480	COG1064	alcohol dehydrogenase
C7R87_1483	COG2207	Transcriptional regulator
C7R87_1484	COG2084	Dehydrogenase
C7R87_1486	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C7R87_1487	COG0583	DNA-binding transcription factor activity
C7R87_1489	COG0129	dihydroxy-acid dehydratase activity
C7R87_1490	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_1496	COG0583	DNA-binding transcription factor activity
C7R87_1497	COG4948	Mandelate Racemase Muconate Lactonizing
C7R87_1498	COG4829	muconolactone delta-isomerase
C7R87_1500	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C7R87_1501	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C7R87_1502	COG0183	Belongs to the thiolase family
C7R87_1503	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C7R87_1505	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_1507	COG3733	amine oxidase
C7R87_1509	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_1511	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_1513	COG4638	Rieske (2fe-2S)
C7R87_1517	COG0154	amidase activity
C7R87_1519	COG2814	Major facilitator Superfamily
C7R87_1524	COG1960	acyl-CoA dehydrogenase activity
C7R87_1525	COG0583	DNA-binding transcription factor activity
C7R87_1526	COG1414	Transcriptional regulator
C7R87_1529	COG2391	methyltransferase activity
C7R87_1531	COG4993	Dehydrogenase
C7R87_1532	COG3659	wide pore channel activity
C7R87_1533	COG3420	alginic acid biosynthetic process
C7R87_1534	COG0710	3-dehydroquinate dehydratase activity
C7R87_1535	COG3485	protocatechuate 3,4-dioxygenase
C7R87_1536	COG3485	protocatechuate 3,4-dioxygenase
C7R87_1537	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C7R87_1538	COG2271	Major facilitator Superfamily
C7R87_1539	COG0596	Alpha beta hydrolase
C7R87_1540	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C7R87_1541	COG0183	Belongs to the thiolase family
C7R87_1542	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C7R87_1543	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C7R87_1545	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
C7R87_1546	COG2323	membrane
C7R87_1555	COG0446	pyridine nucleotide-disulphide oxidoreductase
C7R87_1555	COG1902	pentaerythritol trinitrate reductase activity
C7R87_1558	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C7R87_1560	COG0542	response to heat
C7R87_1561	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
C7R87_1568	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C7R87_1569	COG0569	domain protein
C7R87_1570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C7R87_1573	COG4774	siderophore transport
C7R87_1574	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C7R87_1576	COG1585	Membrane protein implicated in regulation of membrane protease activity
C7R87_1579	COG1294	oxidase, subunit
C7R87_1582	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
C7R87_1584	COG0552	protein localization to endoplasmic reticulum
C7R87_1590	COG0516	GMP reductase activity
C7R87_1590	COG0517	IMP dehydrogenase activity
C7R87_1591	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C7R87_1592	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
C7R87_1594	COG0583	DNA-binding transcription factor activity
C7R87_1595	COG0024	Methionine aminopeptidase
C7R87_1600	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C7R87_1600	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
C7R87_1601	COG1105	Belongs to the carbohydrate kinase PfkB family
C7R87_1602	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C7R87_1602	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C7R87_1602	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
C7R87_1607	COG3300	MHYT domain
C7R87_1607	COG5001	Diguanylate cyclase
C7R87_1610	COG2135	peptidase activity
C7R87_1611	COG0659	secondary active sulfate transmembrane transporter activity
C7R87_1614	COG1113	amino acid transport
C7R87_1616	COG1522	sequence-specific DNA binding
C7R87_1621	COG1011	Hydrolase
C7R87_1622	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
C7R87_1624	COG2137	regulation of response to DNA damage stimulus
C7R87_1626	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C7R87_1633	COG0575	Belongs to the CDS family
C7R87_1634	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C7R87_1639	COG3852	Histidine kinase
C7R87_1640	COG2204	response regulator
C7R87_1651	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C7R87_1652	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
C7R87_1656	COG0697	spore germination
C7R87_1657	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C7R87_1659	COG0303	'Molybdopterin
C7R87_1660	COG0315	cyclic pyranopterin monophosphate synthase activity
C7R87_1660	COG0521	Mo-molybdopterin cofactor biosynthetic process
C7R87_1663	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
C7R87_1664	COG0243	molybdopterin cofactor binding
C7R87_1666	COG0243	molybdopterin cofactor binding
C7R87_1667	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C7R87_1668	COG2146	nitrite reductase [NAD(P)H] activity
C7R87_1668	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C7R87_1670	COG0745	RESPONSE REGULATOR receiver
C7R87_1671	COG1116	anion transmembrane transporter activity
C7R87_1671	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C7R87_1674	COG0511	ligase activity, forming carbon-carbon bonds
C7R87_1677	COG2814	Major facilitator Superfamily
C7R87_1695	COG0592	DNA-directed DNA polymerase activity
C7R87_1765	COG0069	glutamate synthase activity
C7R87_1769	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C7R87_1771	COG1454	alcohol dehydrogenase
C7R87_1772	COG0824	Thioesterase
C7R87_1774	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C7R87_1780	COG0183	Belongs to the thiolase family
C7R87_1782	COG0583	DNA-binding transcription factor activity
C7R87_1785	COG1522	sequence-specific DNA binding
C7R87_1786	COG3135	benzoate transporter
C7R87_1788	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C7R87_1792	COG0589	response to stress
C7R87_1793	COG0488	(ABC) transporter
C7R87_1798	COG0668	transmembrane transport
C7R87_1801	COG1309	transcriptional regulator
C7R87_1804	COG1605	Chorismate mutase
C7R87_1806	COG4221	oxidoreductase activity
C7R87_1808	COG0308	aminopeptidase N
C7R87_1812	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C7R87_1814	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C7R87_1815	COG1454	alcohol dehydrogenase
C7R87_1819	COG0531	amino acid
C7R87_1820	COG4303	Ethanolamine ammonia lyase large subunit
C7R87_1821	COG4302	ethanolamine ammonia-lyase activity
C7R87_1822	COG0519	Catalyzes the synthesis of GMP from XMP
C7R87_1822	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C7R87_1828	COG0697	spore germination
C7R87_1829	COG1923	regulation of RNA biosynthetic process
C7R87_1831	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
C7R87_1832	COG0802	atpase or kinase
C7R87_1836	COG1187	pseudouridine synthase activity
C7R87_1839	COG0583	DNA-binding transcription factor activity
C7R87_1842	COG2814	Major facilitator Superfamily
C7R87_1843	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C7R87_1849	COG0729	surface antigen
C7R87_1853	COG0174	glutamine synthetase
C7R87_1854	COG0745	RESPONSE REGULATOR receiver
C7R87_1855	COG2205	protein histidine kinase activity
C7R87_1857	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
C7R87_1858	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
C7R87_1863	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_1864	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C7R87_1865	COG1960	acyl-CoA dehydrogenase activity
C7R87_1868	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C7R87_1869	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C7R87_1873	COG0583	DNA-binding transcription factor activity
C7R87_1876	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C7R87_1878	COG3658	cytochrome
C7R87_1879	COG1215	transferase activity, transferring glycosyl groups
C7R87_1880	COG1649	PFAM Uncharacterised BCR, COG1649
C7R87_1880	COG0726	polysaccharide deacetylase
C7R87_1888	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
C7R87_1889	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C7R87_1891	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
C7R87_1896	COG0305	Participates in initiation and elongation during chromosome replication
C7R87_1897	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C7R87_1899	COG1305	Transglutaminase-like
C7R87_1901	COG2308	Evidence 4 Homologs of previously reported genes of
C7R87_1908	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
C7R87_1909	COG0138	bifunctional purine biosynthesis protein purh
C7R87_1910	COG0151	Belongs to the GarS family
C7R87_1911	COG1464	Belongs to the NlpA lipoprotein family
C7R87_1912	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C7R87_1913	COG2011	ABC-type metal ion transport system permease component
C7R87_1914	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C7R87_1918	COG1301	dicarboxylic acid transport
C7R87_1924	COG1794	racemase activity, acting on amino acids and derivatives
C7R87_1928	COG3008	intermembrane lipid transfer
C7R87_1928	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C7R87_1929	COG2995	paraquat-inducible protein a
C7R87_1933	COG2985	domain, Protein
C7R87_1937	COG0477	Major facilitator Superfamily
C7R87_1948	COG2186	Transcriptional regulator
C7R87_1950	COG0786	glutamate:sodium symporter activity
C7R87_1951	COG3243	poly(R)-hydroxyalkanoic acid synthase
C7R87_1956	COG3111	PFAM Bacterial OB fold (BOF) protein
C7R87_1975	COG0828	Belongs to the bacterial ribosomal protein bS21 family
C7R87_1976	COG1610	YqeY-like protein
C7R87_1977	COG4783	chaperone-mediated protein folding
C7R87_1988	COG0778	Nitroreductase
C7R87_1990	COG0513	Belongs to the DEAD box helicase family
C7R87_1994	COG2363	Small membrane protein
C7R87_2000	COG1234	tRNA 3'-trailer cleavage
C7R87_2001	COG2195	Cleaves the N-terminal amino acid of tripeptides
C7R87_2003	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
C7R87_2005	COG2819	hydrolase of the alpha beta superfamily
C7R87_2006	COG1960	acyl-CoA dehydrogenase activity
C7R87_2007	COG1301	dicarboxylic acid transport
C7R87_2008	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C7R87_2009	COG3139	Protein of unknown function (DUF1315)
C7R87_2010	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
C7R87_2011	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C7R87_2013	COG0494	nUDIX hydrolase
C7R87_2015	COG0642	Histidine kinase
C7R87_2016	COG0745	RESPONSE REGULATOR receiver
C7R87_2020	COG1720	tRNA m6t6A37 methyltransferase activity
C7R87_2023	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C7R87_2025	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C7R87_2027	COG4598	ABC transporter
C7R87_2028	COG4160	amino acid transport
C7R87_2029	COG4215	(ABC) transporter
C7R87_2032	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_2034	COG1538	Outer membrane efflux protein
C7R87_2041	COG1131	(ABC) transporter
C7R87_2042	COG0842	Transport permease protein
C7R87_2045	COG0772	Belongs to the SEDS family
C7R87_2046	COG2951	lytic endotransglycosylase activity
C7R87_2050	COG2207	Transcriptional regulator
C7R87_2053	COG0052	Belongs to the universal ribosomal protein uS2 family
C7R87_2054	COG0024	Methionine aminopeptidase
C7R87_2056	COG2223	nitrite transmembrane transporter activity
C7R87_2059	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C7R87_2060	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C7R87_2061	COG1960	acyl-CoA dehydrogenase activity
C7R87_2064	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
C7R87_2065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
C7R87_2066	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C7R87_2070	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C7R87_2071	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C7R87_2072	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C7R87_2079	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
C7R87_2082	COG3104	oligopeptide transport
C7R87_2085	COG0739	heme binding
C7R87_2155	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C7R87_2160	COG3384	dioxygenase
C7R87_2162	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C7R87_2163	COG2878	Part of a membrane complex involved in electron transport
C7R87_2164	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
C7R87_2169	COG0768	penicillin binding
C7R87_2170	COG0742	ribosomal rna small subunit methyltransferase
C7R87_2173	COG0830	nickel cation binding
C7R87_2175	COG0804	urea catabolic process
C7R87_2184	COG1253	flavin adenine dinucleotide binding
C7R87_2195	COG1773	rubredoxin
C7R87_2196	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C7R87_2198	COG0583	DNA-binding transcription factor activity
C7R87_2203	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
C7R87_2204	COG4181	ATPase activity
C7R87_2213	COG1262	PFAM Formylglycine-generating sulfatase enzyme
C7R87_2217	COG0306	phosphate transporter
C7R87_2220	COG3958	Transketolase
C7R87_2221	COG3959	Transketolase, thiamine diphosphate binding domain
C7R87_2222	COG2271	Major facilitator Superfamily
C7R87_2223	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_2224	COG0583	DNA-binding transcription factor activity
C7R87_2227	COG2223	nitrite transmembrane transporter activity
C7R87_2228	COG2207	Transcriptional regulator
C7R87_2229	COG2066	Belongs to the glutaminase family
C7R87_2230	COG0242	peptide deformylase activity
C7R87_2232	COG0477	Major facilitator Superfamily
C7R87_2234	COG0028	Belongs to the TPP enzyme family
C7R87_2237	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_2238	COG2267	carboxylic ester hydrolase activity
C7R87_2240	COG2271	Major facilitator Superfamily
C7R87_2241	COG0446	pyridine nucleotide-disulphide oxidoreductase
C7R87_2243	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_2247	COG1414	Transcriptional regulator
C7R87_2250	COG1024	Enoyl-CoA hydratase
C7R87_2252	COG1215	transferase activity, transferring glycosyl groups
C7R87_2253	COG1649	PFAM Uncharacterised BCR, COG1649
C7R87_2253	COG0726	polysaccharide deacetylase
C7R87_2255	COG4681	YaeQ
C7R87_2257	COG0523	cobalamin synthesis protein
C7R87_2259	COG1607	acyl-coa hydrolase
C7R87_2261	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C7R87_2262	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C7R87_2263	COG1309	transcriptional regulator
C7R87_2268	COG2040	homocysteine
C7R87_2269	COG0531	amino acid
C7R87_2280	COG1595	DNA-templated transcription, initiation
C7R87_2282	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C7R87_2283	COG0477	Major facilitator Superfamily
C7R87_2297	COG1196	nuclear chromosome segregation
C7R87_2297	COG0741	lytic transglycosylase activity
C7R87_2297	COG0739	heme binding
C7R87_2300	COG1598	PFAM Uncharacterised protein family UPF0150
C7R87_2324	COG5410	chromosome segregation
C7R87_2354	COG0405	Gamma-glutamyltransferase
C7R87_2355	COG2814	Major facilitator Superfamily
C7R87_2357	COG2050	protein possibly involved in aromatic compounds catabolism
C7R87_2360	COG1090	epimerase
C7R87_2364	COG0420	3'-5' exonuclease activity
C7R87_2369	COG0735	belongs to the Fur family
C7R87_2370	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C7R87_2374	COG0121	glutamine amidotransferase
C7R87_2377	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C7R87_2379	COG0210	DNA helicase
C7R87_2380	COG2885	chlorophyll binding
C7R87_2381	COG0204	Acyl-transferase
C7R87_2384	COG2894	cell division
C7R87_2389	COG1280	lysine exporter protein (LysE YggA)
C7R87_2390	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
C7R87_2390	COG1674	ftsk spoiiie
C7R87_2391	COG0492	ferredoxin-NADP+ reductase activity
C7R87_2394	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
C7R87_2396	COG0456	acetyltransferase
C7R87_2408	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C7R87_2408	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C7R87_2412	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_2416	COG0473	3-isopropylmalate dehydrogenase activity
C7R87_2417	COG0583	DNA-binding transcription factor activity
C7R87_2420	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C7R87_2425	COG0564	pseudouridine synthase activity
C7R87_2427	COG0358	DNA primase activity
C7R87_2430	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
C7R87_2435	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C7R87_2441	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C7R87_2443	COG0351	phosphomethylpyrimidine kinase
C7R87_2443	COG0352	thiamine-phosphate diphosphorylase activity
C7R87_2443	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
C7R87_2444	COG1652	LysM domain
C7R87_2449	COG1399	metal-binding, possibly nucleic acid-binding protein
C7R87_2450	COG3101	peptidyl-lysine hydroxylation
C7R87_2451	COG0009	L-threonylcarbamoyladenylate synthase
C7R87_2452	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
C7R87_2453	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
C7R87_2456	COG4106	trans-aconitate 2-methyltransferase activity
C7R87_2459	COG0596	Alpha beta hydrolase
C7R87_2459	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C7R87_2459	COG2226	methyltransferase
C7R87_2461	COG2826	transposase and inactivated derivatives, IS30 family
C7R87_2462	COG1877	trehalose-phosphatase activity
C7R87_2463	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
C7R87_2464	COG2223	nitrite transmembrane transporter activity
C7R87_2468	COG1196	nuclear chromosome segregation
C7R87_2470	COG0730	response to heat
C7R87_2473	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C7R87_2475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C7R87_2485	COG0489	protein tyrosine kinase activity
C7R87_2487	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C7R87_2487	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C7R87_2493	COG2515	1-aminocyclopropane-1-carboxylate deaminase
C7R87_2494	COG2081	HI0933 family
C7R87_2496	COG0668	transmembrane transport
C7R87_2500	COG0583	DNA-binding transcription factor activity
C7R87_2504	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C7R87_2505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C7R87_2511	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C7R87_2518	COG2205	protein histidine kinase activity
C7R87_2519	COG0745	RESPONSE REGULATOR receiver
C7R87_2522	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C7R87_2524	COG2205	protein histidine kinase activity
C7R87_2525	COG2826	transposase and inactivated derivatives, IS30 family
C7R87_2527	COG2826	transposase and inactivated derivatives, IS30 family
C7R87_2540	COG4993	Dehydrogenase
C7R87_2544	COG0384	phenazine biosynthesis protein PhzF
C7R87_2548	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_2549	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
C7R87_2551	COG0583	DNA-binding transcription factor activity
C7R87_2555	COG1473	amidohydrolase
C7R87_2557	COG0583	DNA-binding transcription factor activity
C7R87_2560	COG0583	DNA-binding transcription factor activity
C7R87_2561	COG1053	succinate dehydrogenase
C7R87_2563	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C7R87_2564	COG2814	Major facilitator Superfamily
C7R87_2565	COG1960	acyl-CoA dehydrogenase activity
C7R87_2566	COG0583	DNA-binding transcription factor activity
C7R87_2567	COG1063	alcohol dehydrogenase
C7R87_2573	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
C7R87_2574	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
C7R87_2575	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C7R87_2578	COG3667	copper resistance
C7R87_2579	COG2132	Multicopper oxidase
C7R87_2581	COG0561	phosphatase activity
C7R87_2582	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C7R87_2587	COG1214	PFAM Peptidase M22, glycoprotease
C7R87_2596	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C7R87_2598	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
C7R87_2599	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
C7R87_2600	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
C7R87_2612	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C7R87_2614	COG1846	Transcriptional regulator
C7R87_2615	COG1764	response to oxidative stress
C7R87_2623	COG0037	tRNA processing
C7R87_2625	COG0248	Ppx GppA phosphatase
C7R87_2631	COG0072	phenylalanine-tRNA ligase activity
C7R87_2636	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
C7R87_2639	COG1238	metal cluster binding
C7R87_2640	COG0625	glutathione transferase activity
C7R87_2643	COG0318	PFAM AMP-dependent synthetase and ligase
C7R87_2644	COG3028	Belongs to the UPF0307 family
C7R87_2645	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C7R87_2649	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
C7R87_2650	COG0617	tRNA 3'-terminal CCA addition
C7R87_2651	COG1555	photosystem II stabilization
C7R87_2652	COG3956	TIGRFAM MazG family protein
C7R87_2654	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C7R87_2658	COG5002	protein histidine kinase activity
C7R87_2658	COG2205	protein histidine kinase activity
C7R87_2658	COG0784	Response regulator, receiver
C7R87_2659	COG1024	Enoyl-CoA hydratase
C7R87_2660	COG2084	Dehydrogenase
C7R87_2661	COG3622	Belongs to the hyi family
C7R87_2664	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
C7R87_2665	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
C7R87_2666	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
C7R87_2667	COG0697	spore germination
C7R87_2669	COG2814	Major facilitator Superfamily
C7R87_2670	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C7R87_2672	COG0583	DNA-binding transcription factor activity
C7R87_2674	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C7R87_2677	COG0084	hydrolase, TatD family'
C7R87_2680	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
C7R87_2686	COG0440	acetolactate synthase activity
C7R87_2687	COG0028	Belongs to the TPP enzyme family
C7R87_2692	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_2695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_2696	COG0577	efflux transmembrane transporter activity
C7R87_2696	COG1136	(ABC) transporter
C7R87_2697	COG1538	Outer membrane efflux protein
C7R87_2700	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
C7R87_2701	COG1162	GTPase activity
C7R87_2703	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C7R87_2707	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C7R87_2708	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_2716	COG2986	histidine ammonia-lyase
C7R87_2720	COG0318	PFAM AMP-dependent synthetase and ligase
C7R87_2722	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C7R87_2723	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C7R87_2731	COG1426	Protein conserved in bacteria
C7R87_2738	COG0793	Belongs to the peptidase S41A family
C7R87_2741	COG2267	carboxylic ester hydrolase activity
C7R87_2743	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_2744	COG3265	gluconokinase activity
C7R87_2746	COG0800	Aldolase
C7R87_2748	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C7R87_2749	COG0280	phosphate acetyltransferase
C7R87_2749	COG0857	belongs to the CobB CobQ family
C7R87_2750	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C7R87_2750	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C7R87_2754	COG0740	serine-type endopeptidase activity
C7R87_2756	COG4774	siderophore transport
C7R87_2758	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C7R87_2760	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C7R87_2760	COG2813	Specifically methylates the guanine in position
C7R87_2780	COG0788	formyltetrahydrofolate deformylase activity
C7R87_2783	COG0227	Belongs to the bacterial ribosomal protein bL28 family
C7R87_2784	COG0267	Belongs to the bacterial ribosomal protein bL33 family
C7R87_2785	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C7R87_2785	COG4651	solute:proton antiporter activity
C7R87_2789	COG0724	RNA recognition motif
C7R87_2790	COG0210	DNA helicase
C7R87_2795	COG1733	regulation of RNA biosynthetic process
C7R87_2799	COG1280	lysine exporter protein (LysE YggA)
C7R87_2800	COG1560	Kdo2-lipid A biosynthetic process
C7R87_2802	COG1301	dicarboxylic acid transport
C7R87_2815	COG0473	3-isopropylmalate dehydrogenase activity
C7R87_2829	COG0583	DNA-binding transcription factor activity
C7R87_2831	COG0625	glutathione transferase activity
C7R87_2832	COG2378	regulation of single-species biofilm formation
C7R87_2833	COG0546	phosphoglycolate phosphatase activity
C7R87_2836	COG1530	ribonuclease E activity
C7R87_2840	COG0583	DNA-binding transcription factor activity
C7R87_2841	COG4221	oxidoreductase activity
C7R87_2842	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C7R87_2844	COG0534	Mate efflux family protein
C7R87_2847	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C7R87_2853	COG0493	'glutamate synthase
C7R87_2855	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
C7R87_2856	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C7R87_2860	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C7R87_2862	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C7R87_2862	COG0644	oxidoreductase
C7R87_2863	COG0425	Belongs to the sulfur carrier protein TusA family
C7R87_2864	COG4535	Mg2 and Co2 transporter CorC
C7R87_2866	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C7R87_2870	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C7R87_2871	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C7R87_2871	COG0475	glutathione-regulated potassium exporter activity
C7R87_2872	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
C7R87_2874	COG0484	heat shock protein binding
C7R87_2875	COG0789	Transcriptional regulator
C7R87_2876	COG0598	Magnesium transport protein CorA
C7R87_2880	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C7R87_2881	COG1074	ATP-dependent DNA helicase activity
C7R87_2882	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
C7R87_2886	COG2226	methyltransferase
C7R87_2889	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C7R87_2890	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
C7R87_2893	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C7R87_2893	COG2111	Na H antiporter
C7R87_2894	COG1006	Multisubunit Na H antiporter MnhC subunit
C7R87_2895	COG0651	ATP synthesis coupled electron transport
C7R87_2897	COG2212	antiporter activity
C7R87_2901	COG0195	Participates in both transcription termination and antitermination
C7R87_2911	COG0237	dephospho-CoA kinase activity
C7R87_2913	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C7R87_2916	COG0497	DNA recombination
C7R87_2918	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
C7R87_2924	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C7R87_2924	COG2169	Transcriptional regulator
C7R87_2925	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C7R87_2947	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
C7R87_2950	COG0326	Molecular chaperone. Has ATPase activity
C7R87_2953	COG2056	Na+-H+ antiporter family
C7R87_2954	COG0596	Alpha beta hydrolase
C7R87_2973	COG0546	phosphoglycolate phosphatase activity
C7R87_2974	COG1716	ATPase activity
C7R87_2983	COG0181	hydroxymethylbilane synthase activity
C7R87_2985	COG3275	phosphorelay sensor kinase activity
C7R87_2989	COG1538	Outer membrane efflux protein
C7R87_2990	COG0697	spore germination
C7R87_2995	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C7R87_2996	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C7R87_2997	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C7R87_2998	COG0772	Belongs to the SEDS family
C7R87_3003	COG4974	Belongs to the 'phage' integrase family
C7R87_3004	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C7R87_3006	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C7R87_3008	COG2197	response regulator
C7R87_3011	COG0793	Belongs to the peptidase S41A family
C7R87_3012	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
C7R87_3013	COG0795	lipopolysaccharide-transporting ATPase activity
C7R87_3021	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C7R87_3021	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C7R87_3023	COG0004	ammonium transporteR
C7R87_3024	COG0347	Belongs to the P(II) protein family
C7R87_3026	COG0606	chelatase, subunit chli
C7R87_3038	COG0659	secondary active sulfate transmembrane transporter activity
C7R87_3039	COG0589	response to stress
C7R87_3045	COG0606	chelatase, subunit chli
C7R87_3046	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C7R87_3048	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C7R87_3052	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C7R87_3055	COG0318	PFAM AMP-dependent synthetase and ligase
C7R87_3057	COG0477	Major facilitator Superfamily
C7R87_3058	COG2860	membrane
C7R87_3060	COG1253	flavin adenine dinucleotide binding
C7R87_3063	COG2814	Major facilitator Superfamily
C7R87_3065	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C7R87_3072	COG0655	NAD(P)H dehydrogenase (quinone) activity
C7R87_3074	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C7R87_3081	COG1309	transcriptional regulator
C7R87_3088	COG0758	DNA mediated transformation
C7R87_3090	COG0697	spore germination
C7R87_3091	COG1309	transcriptional regulator
C7R87_3094	COG0386	Belongs to the glutathione peroxidase family
C7R87_3107	COG1121	(ABC) transporter
C7R87_3108	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C7R87_3109	COG1280	lysine exporter protein (LysE YggA)
C7R87_3110	COG2837	iron assimilation
C7R87_3112	COG0281	malic enzyme
C7R87_3121	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C7R87_3121	COG0519	Catalyzes the synthesis of GMP from XMP
C7R87_3122	COG4399	Belongs to the UPF0754 family
C7R87_3123	COG2259	Doxx family
C7R87_3124	COG0586	Pfam SNARE associated Golgi protein
C7R87_3127	COG1192	Involved in chromosome partitioning
C7R87_3129	COG0271	Belongs to the BolA IbaG family
C7R87_3133	COG2267	carboxylic ester hydrolase activity
C7R87_3137	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C7R87_3137	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
C7R87_3137	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C7R87_3137	COG3321	synthase
C7R87_3138	COG1960	acyl-CoA dehydrogenase activity
C7R87_3141	COG2197	response regulator
C7R87_3143	COG3916	Acyl-homoserine-lactone synthase
C7R87_3144	COG0477	Major facilitator Superfamily
C7R87_3145	COG1024	Enoyl-CoA hydratase
C7R87_3146	COG1024	Enoyl-CoA hydratase
C7R87_3147	COG1960	acyl-CoA dehydrogenase activity
C7R87_3148	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C7R87_3152	COG1113	amino acid transport
C7R87_3153	COG1113	amino acid transport
C7R87_3154	COG0251	oxidation-reduction process
C7R87_3157	COG1522	sequence-specific DNA binding
C7R87_3162	COG0564	pseudouridine synthase activity
C7R87_3166	COG1051	belongs to the nudix hydrolase family
C7R87_3169	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C7R87_3172	COG1802	Transcriptional regulator
C7R87_3173	COG1448	Aminotransferase
C7R87_3174	COG0277	FAD linked oxidase domain protein
C7R87_3176	COG2186	Transcriptional regulator
C7R87_3179	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C7R87_3180	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C7R87_3183	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C7R87_3184	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C7R87_3185	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C7R87_3196	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
C7R87_3197	COG1596	polysaccharide export
C7R87_3202	COG0728	peptidoglycan biosynthetic process
C7R87_3203	COG3023	N-Acetylmuramoyl-L-alanine amidase
C7R87_3215	COG0546	phosphoglycolate phosphatase activity
C7R87_3216	COG1028	Short-chain dehydrogenase reductase Sdr
C7R87_3220	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C7R87_3221	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C7R87_3222	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C7R87_3223	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C7R87_3224	COG1116	anion transmembrane transporter activity
C7R87_3225	COG1309	transcriptional regulator
C7R87_3226	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C7R87_3228	COG0196	riboflavin kinase activity
C7R87_3229	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
C7R87_3231	COG1047	Peptidyl-prolyl cis-trans
C7R87_3239	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C7R87_3244	COG0583	DNA-binding transcription factor activity
C7R87_3250	COG2951	lytic endotransglycosylase activity
C7R87_3251	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
C7R87_3255	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C7R87_3257	COG0671	phosphoesterase, PA-phosphatase related
C7R87_3258	COG0861	Integral membrane protein TerC family
C7R87_3261	COG0754	glutathionylspermidine amidase activity
C7R87_3263	COG0402	S-adenosylhomocysteine deaminase activity
C7R87_3267	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C7R87_3268	COG1230	cation diffusion facilitator family transporter
C7R87_3271	COG0706	membrane insertase activity
C7R87_3274	COG0230	Belongs to the bacterial ribosomal protein bL34 family
C7R87_3276	COG0592	DNA-directed DNA polymerase activity
C7R87_3278	COG0187	DNA topoisomerase II activity
C7R87_3280	COG0586	Pfam SNARE associated Golgi protein
C7R87_3281	COG0488	(ABC) transporter
C7R87_3286	COG0596	Alpha beta hydrolase
C7R87_3287	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
C7R87_3288	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
C7R87_3298	COG0733	neurotransmitter:sodium symporter activity
C7R87_3306	COG2233	PERMEase
C7R87_3310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C7R87_3317	COG2814	Major facilitator Superfamily
C7R87_3318	COG0656	L-ascorbic acid biosynthetic process
C7R87_3319	COG0583	DNA-binding transcription factor activity
C7R87_3322	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C7R87_3323	COG1064	alcohol dehydrogenase
C7R87_3324	COG2818	Glycosylase
C7R87_3327	COG1194	a g-specific adenine glycosylase
C7R87_3331	COG2983	Belongs to the UPF0260 family
C7R87_3332	COG2133	pyrroloquinoline quinone binding
C7R87_3333	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C7R87_3334	COG2116	formate transmembrane transporter activity
C7R87_3339	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C7R87_3340	COG1335	isochorismatase
C7R87_3341	COG0385	Bile acid
C7R87_3342	COG0534	Mate efflux family protein
C7R87_3343	COG1683	Conserved Protein
C7R87_3347	COG0625	glutathione transferase activity
C7R87_3349	COG1113	amino acid transport
C7R87_3351	COG0523	cobalamin synthesis protein
C7R87_3354	COG2188	Transcriptional regulator
C7R87_3360	COG0010	Belongs to the arginase family
C7R87_3362	COG0546	phosphoglycolate phosphatase activity
C7R87_3363	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C7R87_3364	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
C7R87_3366	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
C7R87_3368	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
C7R87_3373	COG3830	Belongs to the UPF0237 family
C7R87_3373	COG0560	Phosphoserine phosphatase
C7R87_3377	COG0753	catalase activity
C7R87_3389	COG0534	Mate efflux family protein
C7R87_3390	COG0436	Aminotransferase
C7R87_3391	COG2733	membrane
C7R87_3394	COG2918	glutathione biosynthetic process
C7R87_3396	COG3501	Rhs element vgr protein
C7R87_3397	COG3179	chitinase
C7R87_3402	COG3150	esterase
C7R87_3404	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
C7R87_3406	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C7R87_3408	COG2233	PERMEase
C7R87_3416	COG3706	GGDEF domain
C7R87_3420	COG1393	Belongs to the ArsC family
C7R87_3421	COG0708	Exodeoxyribonuclease III
C7R87_3433	COG0189	ligase activity
C7R87_3437	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C7R87_3439	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
C7R87_3442	COG4942	peptidase
C7R87_3444	COG0508	dehydrogenase complex catalyzes the overall conversion of
C7R87_3446	COG2119	membrane
C7R87_3447	COG4774	siderophore transport
C7R87_3448	COG0426	domain, Protein
C7R87_3448	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C7R87_3453	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C7R87_3458	COG1902	pentaerythritol trinitrate reductase activity
C7R87_3459	COG1519	Transferase
C7R87_3460	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C7R87_3461	COG0668	transmembrane transport
C7R87_3464	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C7R87_3465	COG1335	isochorismatase
C7R87_3466	COG1522	sequence-specific DNA binding
C7R87_3471	COG2198	Histidine kinase
C7R87_3471	COG0784	Response regulator, receiver
C7R87_3471	COG2205	protein histidine kinase activity
C7R87_3472	COG3162	membrane
C7R87_3473	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C7R87_3476	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C7R87_3479	COG3706	GGDEF domain
C7R87_3480	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C7R87_3481	COG1309	transcriptional regulator
C7R87_3485	COG0351	phosphomethylpyrimidine kinase
C7R87_3485	COG0352	thiamine-phosphate diphosphorylase activity
C7R87_3485	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
C7R87_3487	COG2814	Major facilitator Superfamily
C7R87_3490	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C7R87_3492	COG1113	amino acid transport
C7R87_3494	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C7R87_3495	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_3497	COG1335	isochorismatase
C7R87_3504	COG2814	Major facilitator Superfamily
C7R87_3505	COG0583	DNA-binding transcription factor activity
C7R87_3510	COG0667	Aldo Keto reductase
C7R87_3516	COG1733	regulation of RNA biosynthetic process
C7R87_3519	COG1733	regulation of RNA biosynthetic process
C7R87_3520	COG2249	NAD(P)H dehydrogenase (quinone) activity
C7R87_3523	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
C7R87_3524	COG2207	Transcriptional regulator
C7R87_3536	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
C7R87_3544	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
C7R87_3550	COG0427	acetyl-CoA hydrolase
C7R87_3552	COG0745	RESPONSE REGULATOR receiver
C7R87_3554	COG0659	secondary active sulfate transmembrane transporter activity
C7R87_3555	COG4221	oxidoreductase activity
C7R87_3557	COG0488	(ABC) transporter
C7R87_3571	COG0833	amino acid
C7R87_3580	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C7R87_3581	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C7R87_3584	COG2226	methyltransferase
C7R87_3594	COG0067	glutamate synthase
C7R87_3594	COG0069	glutamate synthase activity
C7R87_3594	COG0070	glutamate synthase
C7R87_3595	COG0493	'glutamate synthase
C7R87_3597	COG1704	LemA family
C7R87_3598	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
C7R87_3602	COG3307	-O-antigen
C7R87_3609	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C7R87_3611	COG0194	GDP metabolic process
C7R87_3621	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
C7R87_3625	COG5380	lipid catabolic process
C7R87_3626	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
C7R87_3631	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C7R87_3632	COG0277	FAD linked oxidase domain protein
C7R87_3634	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
C7R87_3635	COG2249	NAD(P)H dehydrogenase (quinone) activity
C7R87_3639	COG1289	transmembrane transporter activity
C7R87_3641	COG0628	permease
C7R87_3648	COG0833	amino acid
C7R87_3650	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C7R87_3651	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C7R87_3653	COG1012	belongs to the aldehyde dehydrogenase family
C7R87_3661	COG0583	DNA-binding transcription factor activity
C7R87_3670	COG0517	IMP dehydrogenase activity
C7R87_3671	COG1983	PspC domain protein
C7R87_3673	COG1960	acyl-CoA dehydrogenase activity
C7R87_3676	COG0408	coproporphyrinogen oxidase activity
C7R87_3680	COG0513	Belongs to the DEAD box helicase family
C7R87_3684	COG1127	ABC transporter
C7R87_3685	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C7R87_3687	COG2854	intermembrane phospholipid transfer
C7R87_3689	COG0598	Magnesium transport protein CorA
C7R87_3691	COG0494	nUDIX hydrolase
C7R87_3692	COG1040	competence protein
C7R87_3693	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
C7R87_3697	COG1946	Acyl-CoA thioesterase
C7R87_3698	COG1301	dicarboxylic acid transport
C7R87_3701	COG1959	2 iron, 2 sulfur cluster binding
C7R87_3702	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C7R87_3702	COG1017	nitric oxide dioxygenase activity
C7R87_3703	COG0433	COG0433 Predicted ATPase
C7R87_3704	COG0626	cystathionine gamma-synthase activity
C7R87_3728	COG0257	Belongs to the bacterial ribosomal protein bL36 family
C7R87_3730	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
C7R87_3735	COG1960	acyl-CoA dehydrogenase activity
C7R87_3736	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
C7R87_3742	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
C7R87_3743	COG0339	signal peptide processing
C7R87_3744	COG0557	exoribonuclease II activity
C7R87_3753	COG0179	Fumarylacetoacetate (FAA) hydrolase
C7R87_3754	COG2169	Transcriptional regulator
C7R87_3755	COG0697	spore germination
C7R87_3756	COG1295	ribonuclease BN
C7R87_3763	COG1702	phosphate starvation-inducible protein PhoH
C7R87_3765	COG1196	nuclear chromosome segregation
C7R87_3765	COG0739	heme binding
C7R87_3765	COG0741	lytic transglycosylase activity
C7R87_3771	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
C7R87_3772	COG1183	phosphatidylcholine synthase activity
C7R87_3781	COG1960	acyl-CoA dehydrogenase activity
C7R87_3782	COG1309	transcriptional regulator
C7R87_3785	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C7R87_3786	COG1960	acyl-CoA dehydrogenase activity
C7R87_3790	COG2969	positive regulation of protein catabolic process
C7R87_3792	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
C7R87_3795	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
C7R87_3796	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
C7R87_3800	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C7R87_3801	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C7R87_3803	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C7R87_3804	COG1408	metallophosphoesterase
C7R87_3818	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C7R87_3818	COG3453	Protein conserved in bacteria
C7R87_3821	COG1607	acyl-coa hydrolase
C7R87_3827	COG2350	Protein conserved in bacteria
C7R87_3829	COG0613	PHP domain protein
C7R87_3830	COG3781	membrane
C7R87_3832	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C7R87_3833	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C7R87_3835	COG1862	Preprotein translocase
C7R87_3843	COG2205	protein histidine kinase activity
C7R87_3844	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
C7R87_3848	COG0726	polysaccharide deacetylase
C7R87_3849	COG0463	Glycosyl transferase, family 2
C7R87_3850	COG0438	transferase activity, transferring glycosyl groups
C7R87_3869	COG0625	glutathione transferase activity
C7R87_3870	COG0583	DNA-binding transcription factor activity
C7R87_3871	COG1960	acyl-CoA dehydrogenase activity
C7R87_3872	COG1960	acyl-CoA dehydrogenase activity
C7R87_3874	COG2205	protein histidine kinase activity
C7R87_3875	COG0745	RESPONSE REGULATOR receiver
C7R87_3876	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
C7R87_3880	COG2096	Adenosyltransferase
C7R87_3883	COG0133	tryptophan synthase activity
C7R87_3891	COG0285	dihydrofolate synthase activity
C7R87_3895	COG0450	alkyl hydroperoxide reductase
C7R87_3898	COG0477	Major facilitator Superfamily
C7R87_3899	COG1272	protein, Hemolysin III
C7R87_3906	COG0183	Belongs to the thiolase family
C7R87_3907	COG2207	Transcriptional regulator
C7R87_3911	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C7R87_3915	COG0183	Belongs to the thiolase family
C7R87_3917	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C7R87_3917	COG2885	chlorophyll binding
C7R87_3919	COG1690	Belongs to the RtcB family
C7R87_3920	COG0833	amino acid
C7R87_3922	COG2233	PERMEase
C7R87_3929	COG2094	Belongs to the DNA glycosylase MPG family
C7R87_3930	COG4772	TonB-dependent receptor
C7R87_3931	COG1902	pentaerythritol trinitrate reductase activity
C7R87_3932	COG0679	Auxin Efflux Carrier
C7R87_3934	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C7R87_3935	COG0354	folic acid binding
C7R87_3937	COG3189	MarR family transcriptional regulator
C7R87_3938	COG2824	Alkylphosphonate utilization operon protein PhnA
C7R87_3939	COG3422	double-strand break repair
C7R87_3947	COG0840	transmembrane signaling receptor activity
C7R87_3951	COG0358	DNA primase activity
C7R87_3959	COG0194	GDP metabolic process
C7R87_3964	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
C7R87_3975	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
C7R87_3984	COG0419	ATPase involved in DNA repair
C7R87_3989	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C7R87_3989	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
C7R87_3992	COG3316	Transposase and inactivated derivatives
C7R87_3994	COG3173	Aminoglycoside phosphotransferase
C7R87_4002	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C7R87_4007	COG0756	dUTP diphosphatase activity
C7R87_4050	COG1475	DNA binding
C7R87_4051	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C7R87_4070	COG0791	NLP P60 protein
C7R87_4083	COG3853	Toxic anion resistance protein (TelA)
C7R87_4086	COG1475	DNA binding
C7R87_4102	COG1525	nuclease
C7R87_4114	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C7R87_4129	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C7R87_4136	COG0741	lytic transglycosylase activity
C7R87_4141	COG2826	transposase and inactivated derivatives, IS30 family
C7R87_4153	COG0484	heat shock protein binding