C7R87_0007 SM00671 Sel1-like repeats. C7R87_0011 SM00073 Histidine Phosphotransfer domain C7R87_0011 SM00260 Two component signalling adaptor domain C7R87_0011 SM00387 Histidine kinase-like ATPases C7R87_0011 SM00448 cheY-homologous receiver domain C7R87_0011 SM01231 C7R87_0011 C7R87_0041 SM00845 GatB domain C7R87_0048 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_0055 SM00342 helix_turn_helix, arabinose operon control protein C7R87_0059 SM00342 helix_turn_helix, arabinose operon control protein C7R87_0060 SM00829 Enoylreductase C7R87_0074 SM00530 Helix-turn-helix XRE-family like proteins C7R87_0082 SM00507 HNH nucleases C7R87_0131 SM01040 BRO family, N-terminal domain C7R87_0144 SM00244 prohibitin homologues C7R87_0147 SM00563 Phosphate acyltransferases C7R87_0151 SM00448 cheY-homologous receiver domain C7R87_0151 SM00862 Transcriptional regulatory protein, C terminal C7R87_0152 SM00387 Histidine kinase-like ATPases C7R87_0152 SM00388 His Kinase A (phosphoacceptor) domain C7R87_0162 SM00822 C7R87_0162 C7R87_0169 SM00014 Acid phosphatase homologues C7R87_0190 SM00450 Rhodanese Homology Domain C7R87_0198 SM00861 Transketolase, pyrimidine binding domain C7R87_0202 SM00881 CoA binding domain C7R87_0209 SM00854 Bacterial capsule synthesis protein PGA_cap C7R87_0215 SM00851 MGS-like domain C7R87_0215 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C7R87_0216 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C7R87_0219 SM01103 C7R87_0219 C7R87_0221 SM00382 ATPases associated with a variety of cellular activities C7R87_0236 SM00046 Diacylglycerol kinase catalytic domain (presumed) C7R87_0240 SM00883 Chaperonin 10 Kd subunit C7R87_0243 SM00849 Metallo-beta-lactamase superfamily C7R87_0269 SM00978 C7R87_0269 C7R87_0270 SM00382 ATPases associated with a variety of cellular activities C7R87_0278 SM00893 Electron transfer flavoprotein domain C7R87_0279 SM00893 Electron transfer flavoprotein domain C7R87_0280 SM00434 DNA Topoisomerase IV C7R87_0295 SM00382 ATPases associated with a variety of cellular activities C7R87_0296 SM00849 Metallo-beta-lactamase superfamily C7R87_0322 SM00382 ATPases associated with a variety of cellular activities C7R87_0323 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C7R87_0324 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C7R87_0325 SM01211 C7R87_0325 C7R87_0341 SM00382 ATPases associated with a variety of cellular activities C7R87_0352 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C7R87_0354 SM00838 Elongation factor G C-terminus C7R87_0357 SM00358 Double-stranded RNA binding motif C7R87_0373 SM00267 diguanylate cyclase C7R87_0375 SM00487 DEAD-like helicases superfamily C7R87_0375 SM00490 helicase superfamily c-terminal domain C7R87_0378 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7R87_0383 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C7R87_0404 SM01329 C7R87_0404 C7R87_0414 SM00880 C7R87_0414 C7R87_0414 SM01118 C7R87_0414 C7R87_0420 SM00487 DEAD-like helicases superfamily C7R87_0420 SM00490 helicase superfamily c-terminal domain C7R87_0431 SM00344 helix_turn_helix ASNC type C7R87_0437 SM00382 ATPases associated with a variety of cellular activities C7R87_0446 SM00936 Penicillin-binding protein 5, C-terminal domain C7R87_0450 SM00257 Lysin motif C7R87_0457 SM00052 Putative diguanylate phosphodiesterase C7R87_0460 SM00841 Elongation factor P, C-terminal C7R87_0460 SM01185 C7R87_0460 C7R87_0491 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C7R87_0492 SM00829 Enoylreductase C7R87_0515 SM00382 ATPases associated with a variety of cellular activities C7R87_0516 SM00382 ATPases associated with a variety of cellular activities C7R87_0529 SM01092 CO dehydrogenase flavoprotein C-terminal domain C7R87_0530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C7R87_0532 SM00463 Small MutS-related domain C7R87_0551 SM00530 Helix-turn-helix XRE-family like proteins C7R87_0591 SM00287 Bacterial SH3 domain homologues C7R87_0597 SM00530 Helix-turn-helix XRE-family like proteins C7R87_0616 SM01011 Aminopeptidase P, N-terminal domain C7R87_0620 SM00422 helix_turn_helix, mercury resistance C7R87_0632 SM00479 C7R87_0632 C7R87_0633 SM00257 Lysin motif C7R87_0637 SM00382 ATPases associated with a variety of cellular activities C7R87_0641 SM00479 C7R87_0641 C7R87_0643 SM00267 diguanylate cyclase C7R87_0655 SM00671 Sel1-like repeats. C7R87_0656 SM00671 Sel1-like repeats. C7R87_0657 SM00671 Sel1-like repeats. C7R87_0663 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0663 SM00895 C7R87_0663 C7R87_0666 SM00344 helix_turn_helix ASNC type C7R87_0673 SM00342 helix_turn_helix, arabinose operon control protein C7R87_0675 SM00858 C7R87_0675 C7R87_0677 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C7R87_0678 SM01130 C7R87_0678 C7R87_0680 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0680 SM00895 C7R87_0680 C7R87_0690 SM00347 helix_turn_helix multiple antibiotic resistance protein C7R87_0691 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0691 SM00895 C7R87_0691 C7R87_0704 SM00342 helix_turn_helix, arabinose operon control protein C7R87_0734 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C7R87_0735 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7R87_0737 SM00788 Adenylosuccinate synthetase C7R87_0741 SM00100 Cyclic nucleotide-monophosphate binding domain C7R87_0741 SM00419 helix_turn_helix, cAMP Regulatory protein C7R87_0745 SM00382 ATPases associated with a variety of cellular activities C7R87_0745 SM01086 C-terminal, D2-small domain, of ClpB protein C7R87_0748 SM00981 C7R87_0748 C7R87_0764 SM00382 ATPases associated with a variety of cellular activities C7R87_0764 SM00487 DEAD-like helicases superfamily C7R87_0764 SM00490 helicase superfamily c-terminal domain C7R87_0764 SM00847 Helicase associated domain (HA2) Add an annotation C7R87_0776 SM00422 helix_turn_helix, mercury resistance C7R87_0786 SM00530 Helix-turn-helix XRE-family like proteins C7R87_0790 SM00357 Cold shock protein domain C7R87_0807 SM00840 C7R87_0807 C7R87_0808 SM00116 Domain in cystathionine beta-synthase and other proteins. C7R87_0812 SM00382 ATPases associated with a variety of cellular activities C7R87_0814 SM00382 ATPases associated with a variety of cellular activities C7R87_0823 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C7R87_0823 SM00534 ATPase domain of DNA mismatch repair MUTS family C7R87_0825 SM00344 helix_turn_helix ASNC type C7R87_0828 SM00052 Putative diguanylate phosphodiesterase C7R87_0834 SM00422 helix_turn_helix, mercury resistance C7R87_0849 SM00796 Allophanate hydrolase subunit 1 C7R87_0849 SM00797 Allophanate hydrolase subunit 2 C7R87_0850 SM00878 Biotin carboxylase C-terminal domain C7R87_0852 SM00671 Sel1-like repeats. C7R87_0858 SM00829 Enoylreductase C7R87_0862 SM00796 Allophanate hydrolase subunit 1 C7R87_0862 SM00797 Allophanate hydrolase subunit 2 C7R87_0862 SM00878 Biotin carboxylase C-terminal domain C7R87_0871 SM00382 ATPases associated with a variety of cellular activities C7R87_0887 SM00382 ATPases associated with a variety of cellular activities C7R87_0887 SM01086 C-terminal, D2-small domain, of ClpB protein C7R87_0894 SM00248 ankyrin repeats C7R87_0900 SM00422 helix_turn_helix, mercury resistance C7R87_0904 SM01130 C7R87_0904 C7R87_0906 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0906 SM00895 C7R87_0906 C7R87_0913 SM00342 helix_turn_helix, arabinose operon control protein C7R87_0938 SM01060 C7R87_0938 C7R87_0941 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0941 SM00895 C7R87_0941 C7R87_0944 SM00903 Flavin reductase like domain C7R87_0954 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_0956 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_0956 SM00866 C7R87_0956 C7R87_0958 SM00382 ATPases associated with a variety of cellular activities C7R87_0966 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_0970 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_0977 SM00882 Coenzyme A transferase C7R87_0978 SM00882 Coenzyme A transferase C7R87_0987 SM00878 Biotin carboxylase C-terminal domain C7R87_1004 SM01236 C7R87_1004 C7R87_1005 SM01060 C7R87_1005 C7R87_1008 SM00384 DNA binding domain with preference for A/T rich regions C7R87_1012 SM00344 helix_turn_helix ASNC type C7R87_1014 SM00387 Histidine kinase-like ATPases C7R87_1014 SM00388 His Kinase A (phosphoacceptor) domain C7R87_1014 SM00448 cheY-homologous receiver domain C7R87_1015 SM00421 helix_turn_helix, Lux Regulon C7R87_1015 SM00448 cheY-homologous receiver domain C7R87_1020 SM00382 ATPases associated with a variety of cellular activities C7R87_1021 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_1022 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_1030 SM00450 Rhodanese Homology Domain C7R87_1031 SM00822 C7R87_1031 C7R87_1038 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1049 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C7R87_1053 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1065 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_1066 SM00382 ATPases associated with a variety of cellular activities C7R87_1071 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1071 SM00895 C7R87_1071 C7R87_1077 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C7R87_1088 SM00481 DNA polymerase alpha chain like domain C7R87_1089 SM00870 C7R87_1089 C7R87_1094 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1097 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C7R87_1104 SM00100 Cyclic nucleotide-monophosphate binding domain C7R87_1104 SM00419 helix_turn_helix, cAMP Regulatory protein C7R87_1110 SM00382 ATPases associated with a variety of cellular activities C7R87_1110 SM00930 C7R87_1110 C7R87_1118 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_1121 SM00382 ATPases associated with a variety of cellular activities C7R87_1123 SM00344 helix_turn_helix ASNC type C7R87_1125 SM00563 Phosphate acyltransferases C7R87_1127 SM01236 C7R87_1127 C7R87_1146 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_1146 SM00876 Biotin and Thiamin Synthesis associated domain C7R87_1151 SM00530 Helix-turn-helix XRE-family like proteins C7R87_1158 SM00861 Transketolase, pyrimidine binding domain C7R87_1160 SM00867 YceI-like domain C7R87_1168 SM00344 helix_turn_helix ASNC type C7R87_1175 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1177 SM00382 ATPases associated with a variety of cellular activities C7R87_1181 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C7R87_1183 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C7R87_1195 SM00470 ParB-like nuclease domain C7R87_1198 SM00382 ATPases associated with a variety of cellular activities C7R87_1210 SM00986 Uracil DNA glycosylase superfamily C7R87_1210 SM00987 UreE urease accessory protein, C-terminal domain C7R87_1215 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_1216 SM00411 bacterial (prokaryotic) histone like domain C7R87_1218 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C7R87_1221 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1239 SM00382 ATPases associated with a variety of cellular activities C7R87_1250 SM00487 DEAD-like helicases superfamily C7R87_1250 SM00490 helicase superfamily c-terminal domain C7R87_1250 SM00982 C7R87_1250 C7R87_1250 SM01058 CarD-like/TRCF domain C7R87_1252 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain C7R87_1255 SM00271 DnaJ molecular chaperone homology domain C7R87_1262 SM00411 bacterial (prokaryotic) histone like domain C7R87_1264 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1282 SM01006 Siderophore biosynthesis protein domain C7R87_1288 SM00855 Phosphoglycerate mutase family C7R87_1300 SM00382 ATPases associated with a variety of cellular activities C7R87_1308 SM01324 C7R87_1308 C7R87_1319 SM00493 C7R87_1319 C7R87_1320 SM00341 Helicase and RNase D C-terminal C7R87_1320 SM00474 3'-5' exonuclease C7R87_1326 SM00382 ATPases associated with a variety of cellular activities C7R87_1331 SM00267 diguanylate cyclase C7R87_1336 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_1338 SM00861 Transketolase, pyrimidine binding domain C7R87_1344 SM00829 Enoylreductase C7R87_1346 SM00382 ATPases associated with a variety of cellular activities C7R87_1347 SM00849 Metallo-beta-lactamase superfamily C7R87_1352 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1356 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1356 SM00866 C7R87_1356 C7R87_1361 SM00382 ATPases associated with a variety of cellular activities C7R87_1362 SM00567 E-Z type HEAT repeats C7R87_1373 SM00882 Coenzyme A transferase C7R87_1374 SM00882 Coenzyme A transferase C7R87_1379 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1384 SM00903 Flavin reductase like domain C7R87_1386 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1393 SM00382 ATPases associated with a variety of cellular activities C7R87_1403 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_1408 SM00155 Phospholipase D. Active site motifs. C7R87_1414 SM00829 Enoylreductase C7R87_1431 SM00448 cheY-homologous receiver domain C7R87_1431 SM00862 Transcriptional regulatory protein, C terminal C7R87_1432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C7R87_1432 SM00387 Histidine kinase-like ATPases C7R87_1432 SM00388 His Kinase A (phosphoacceptor) domain C7R87_1434 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1436 SM00822 C7R87_1436 C7R87_1437 SM00822 C7R87_1437 C7R87_1444 SM00530 Helix-turn-helix XRE-family like proteins C7R87_1455 SM00421 helix_turn_helix, Lux Regulon C7R87_1472 SM01400 C7R87_1472 C7R87_1474 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1476 SM00382 ATPases associated with a variety of cellular activities C7R87_1480 SM00829 Enoylreductase C7R87_1483 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1497 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C7R87_1500 SM00882 Coenzyme A transferase C7R87_1501 SM00882 Coenzyme A transferase C7R87_1508 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1509 SM00903 Flavin reductase like domain C7R87_1518 SM00347 helix_turn_helix multiple antibiotic resistance protein C7R87_1522 SM00855 Phosphoglycerate mutase family C7R87_1526 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_1527 SM00849 Metallo-beta-lactamase superfamily C7R87_1531 SM00564 beta-propeller repeat C7R87_1533 SM00710 Parallel beta-helix repeats C7R87_1540 SM00998 Adenylosuccinate lyase C-terminus C7R87_1542 SM00882 Coenzyme A transferase C7R87_1543 SM00882 Coenzyme A transferase C7R87_1547 SM01192 C7R87_1547 C7R87_1547 SM01193 C7R87_1547 C7R87_1560 SM00382 ATPases associated with a variety of cellular activities C7R87_1560 SM01086 C-terminal, D2-small domain, of ClpB protein C7R87_1563 SM00859 Semialdehyde dehydrogenase, NAD binding domain C7R87_1572 SM01264 C7R87_1572 C7R87_1584 SM00382 ATPases associated with a variety of cellular activities C7R87_1584 SM00962 SRP54-type protein, GTPase domain C7R87_1584 SM00963 SRP54-type protein, helical bundle domain C7R87_1590 SM00116 Domain in cystathionine beta-synthase and other proteins. C7R87_1605 SM00347 helix_turn_helix multiple antibiotic resistance protein C7R87_1607 SM00052 Putative diguanylate phosphodiesterase C7R87_1607 SM00091 PAS domain C7R87_1607 SM00267 diguanylate cyclase C7R87_1616 SM00344 helix_turn_helix ASNC type C7R87_1622 SM00363 S4 RNA-binding domain C7R87_1623 SM00382 ATPases associated with a variety of cellular activities C7R87_1629 SM00935 Outer membrane protein (OmpH-like) C7R87_1631 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C7R87_1637 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_1639 SM00091 PAS domain C7R87_1639 SM00387 Histidine kinase-like ATPases C7R87_1639 SM00388 His Kinase A (phosphoacceptor) domain C7R87_1640 SM00382 ATPases associated with a variety of cellular activities C7R87_1640 SM00448 cheY-homologous receiver domain C7R87_1657 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1659 SM00852 Probable molybdopterin binding domain C7R87_1660 SM00852 Probable molybdopterin binding domain C7R87_1663 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_1664 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C7R87_1666 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C7R87_1670 SM00448 cheY-homologous receiver domain C7R87_1670 SM01012 C7R87_1670 C7R87_1675 SM00878 Biotin carboxylase C-terminal domain C7R87_1690 SM00530 Helix-turn-helix XRE-family like proteins C7R87_1737 SM00530 Helix-turn-helix XRE-family like proteins C7R87_1761 SM01236 C7R87_1761 C7R87_1769 SM00226 Low molecular weight phosphatase family C7R87_1774 SM00382 ATPases associated with a variety of cellular activities C7R87_1779 SM00822 C7R87_1779 C7R87_1785 SM00344 helix_turn_helix ASNC type C7R87_1788 SM00831 Cation transporter/ATPase, N-terminus C7R87_1793 SM00382 ATPases associated with a variety of cellular activities C7R87_1803 SM00344 helix_turn_helix ASNC type C7R87_1804 SM00830 Chorismate mutase type II C7R87_1812 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1812 SM00871 Bacterial transcription activator, effector binding domain C7R87_1814 SM00382 ATPases associated with a variety of cellular activities C7R87_1817 SM00862 Transcriptional regulatory protein, C terminal C7R87_1831 SM00853 MutL C terminal dimerisation domain C7R87_1831 SM01340 C7R87_1831 C7R87_1836 SM00363 S4 RNA-binding domain C7R87_1853 SM01230 C7R87_1853 C7R87_1854 SM00448 cheY-homologous receiver domain C7R87_1854 SM00862 Transcriptional regulatory protein, C terminal C7R87_1855 SM00387 Histidine kinase-like ATPases C7R87_1855 SM00388 His Kinase A (phosphoacceptor) domain C7R87_1860 SM00905 Dihydroneopterin aldolase C7R87_1863 SM00903 Flavin reductase like domain C7R87_1866 SM00822 C7R87_1866 C7R87_1867 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1868 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_1871 SM00937 C7R87_1871 C7R87_1897 SM01005 Alanine racemase, C-terminal domain C7R87_1899 SM00460 Transglutaminase/protease-like homologues C7R87_1904 SM01228 C7R87_1904 C7R87_1909 SM00798 AICARFT/IMPCHase bienzyme C7R87_1909 SM00851 MGS-like domain C7R87_1910 SM01209 C7R87_1910 C7R87_1910 SM01210 C7R87_1910 C7R87_1912 SM00382 ATPases associated with a variety of cellular activities C7R87_1912 SM00930 C7R87_1912 C7R87_1914 SM00849 Metallo-beta-lactamase superfamily C7R87_1939 SM00972 Spore Coat Protein U domain C7R87_1945 SM00972 Spore Coat Protein U domain C7R87_1948 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_1948 SM00895 C7R87_1948 C7R87_1952 SM00342 helix_turn_helix, arabinose operon control protein C7R87_1955 SM01034 Sensors of blue-light using FAD C7R87_1986 SM00855 Phosphoglycerate mutase family C7R87_1990 SM00487 DEAD-like helicases superfamily C7R87_1990 SM00490 helicase superfamily c-terminal domain C7R87_1991 SM00357 Cold shock protein domain C7R87_2004 SM00830 Chorismate mutase type II C7R87_2015 SM00387 Histidine kinase-like ATPases C7R87_2015 SM00388 His Kinase A (phosphoacceptor) domain C7R87_2016 SM00448 cheY-homologous receiver domain C7R87_2016 SM00862 Transcriptional regulatory protein, C terminal C7R87_2018 SM00382 ATPases associated with a variety of cellular activities C7R87_2023 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_2027 SM00382 ATPases associated with a variety of cellular activities C7R87_2030 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_2038 SM00479 C7R87_2038 C7R87_2041 SM00382 ATPases associated with a variety of cellular activities C7R87_2050 SM00342 helix_turn_helix, arabinose operon control protein C7R87_2060 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_2064 SM00996 S-adenosyl-L-homocysteine hydrolase C7R87_2064 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C7R87_2067 SM00052 Putative diguanylate phosphodiesterase C7R87_2067 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C7R87_2067 SM00091 PAS domain C7R87_2067 SM00267 diguanylate cyclase C7R87_2068 SM00919 Malic enzyme, NAD binding domain C7R87_2068 SM01274 C7R87_2068 C7R87_2070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C7R87_2081 SM01230 C7R87_2081 C7R87_2089 SM01252 C7R87_2089 C7R87_2094 SM00530 Helix-turn-helix XRE-family like proteins C7R87_2138 SM00530 Helix-turn-helix XRE-family like proteins C7R87_2158 SM00382 ATPases associated with a variety of cellular activities C7R87_2158 SM00464 Found in ATP-dependent protease La (LON) C7R87_2162 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7R87_2164 SM00478 endonuclease III C7R87_2174 SM00988 UreE urease accessory protein, N-terminal domain C7R87_2184 SM01091 Transporter associated domain C7R87_2204 SM00382 ATPases associated with a variety of cellular activities C7R87_2206 SM00947 Carbonic anhydrase C7R87_2219 SM01018 B12 binding domain C7R87_2220 SM00861 Transketolase, pyrimidine binding domain C7R87_2223 SM00822 C7R87_2223 C7R87_2228 SM00342 helix_turn_helix, arabinose operon control protein C7R87_2243 SM00822 C7R87_2243 C7R87_2247 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_2255 SM01322 C7R87_2255 C7R87_2278 SM00965 Secretin and TonB N terminus short domain C7R87_2282 SM01130 C7R87_2282 C7R87_2286 SM01040 BRO family, N-terminal domain C7R87_2341 SM00530 Helix-turn-helix XRE-family like proteins C7R87_2358 SM01004 Delta-aminolevulinic acid dehydratase C7R87_2367 SM00382 ATPases associated with a variety of cellular activities C7R87_2381 SM00563 Phosphate acyltransferases C7R87_2390 SM00843 C7R87_2390 C7R87_2400 SM00838 Elongation factor G C-terminus C7R87_2400 SM00889 Elongation factor G, domain IV C7R87_2404 SM00825 Beta-ketoacyl synthase C7R87_2416 SM01329 C7R87_2416 C7R87_2425 SM00363 S4 RNA-binding domain C7R87_2427 SM00400 zinc finger C7R87_2427 SM00493 C7R87_2427 C7R87_2429 SM00028 Tetratricopeptide repeats C7R87_2435 SM01400 C7R87_2435 C7R87_2444 SM00257 Lysin motif C7R87_2446 SM00822 C7R87_2446 C7R87_2447 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C7R87_2454 SM00363 S4 RNA-binding domain C7R87_2466 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C7R87_2466 SM00292 breast cancer carboxy-terminal domain C7R87_2466 SM00532 Ligase N family C7R87_2467 SM00771 ZipA, C-terminal domain (FtsZ-binding) C7R87_2469 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_2473 SM00382 ATPases associated with a variety of cellular activities C7R87_2473 SM00962 SRP54-type protein, GTPase domain C7R87_2473 SM00963 SRP54-type protein, helical bundle domain C7R87_2501 SM00357 Cold shock protein domain C7R87_2510 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C7R87_2510 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7R87_2511 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C7R87_2516 SM00267 diguanylate cyclase C7R87_2518 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C7R87_2518 SM00387 Histidine kinase-like ATPases C7R87_2518 SM00388 His Kinase A (phosphoacceptor) domain C7R87_2519 SM00448 cheY-homologous receiver domain C7R87_2519 SM00862 Transcriptional regulatory protein, C terminal C7R87_2524 SM00387 Histidine kinase-like ATPases C7R87_2540 SM00564 beta-propeller repeat C7R87_2548 SM00903 Flavin reductase like domain C7R87_2554 SM00342 helix_turn_helix, arabinose operon control protein C7R87_2610 SM00331 Sigma factor PP2C-like phosphatases C7R87_2614 SM00347 helix_turn_helix multiple antibiotic resistance protein C7R87_2616 SM00382 ATPases associated with a variety of cellular activities C7R87_2620 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C7R87_2620 SM00474 3'-5' exonuclease C7R87_2620 SM00475 5'-3' exonuclease C7R87_2620 SM00482 DNA polymerase A domain C7R87_2623 SM00977 TilS substrate C-terminal domain C7R87_2627 SM00357 Cold shock protein domain C7R87_2627 SM00382 ATPases associated with a variety of cellular activities C7R87_2627 SM00959 Rho termination factor, N-terminal domain C7R87_2630 SM00411 bacterial (prokaryotic) histone like domain C7R87_2631 SM00873 B3/4 domain C7R87_2631 SM00874 tRNA synthetase B5 domain C7R87_2631 SM00896 Ferredoxin-fold anticodon binding domain C7R87_2642 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C7R87_2651 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C7R87_2654 SM00954 Region found in RelA / SpoT proteins C7R87_2658 SM00073 Histidine Phosphotransfer domain C7R87_2658 SM00387 Histidine kinase-like ATPases C7R87_2658 SM00388 His Kinase A (phosphoacceptor) domain C7R87_2658 SM00448 cheY-homologous receiver domain C7R87_2666 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C7R87_2666 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C7R87_2681 SM01236 C7R87_2681 C7R87_2684 SM00052 Putative diguanylate phosphodiesterase C7R87_2684 SM00267 diguanylate cyclase C7R87_2696 SM00382 ATPases associated with a variety of cellular activities C7R87_2700 SM00479 C7R87_2700 C7R87_2702 SM00450 Rhodanese Homology Domain C7R87_2707 SM00825 Beta-ketoacyl synthase C7R87_2708 SM00822 C7R87_2708 C7R87_2710 SM00825 Beta-ketoacyl synthase C7R87_2724 SM00563 Phosphate acyltransferases C7R87_2727 SM00564 beta-propeller repeat C7R87_2732 SM00028 Tetratricopeptide repeats C7R87_2734 SM00562 C7R87_2734 C7R87_2736 SM00014 Acid phosphatase homologues C7R87_2738 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C7R87_2738 SM00245 tail specific protease C7R87_2753 SM00382 ATPases associated with a variety of cellular activities C7R87_2753 SM00994 ClpX C4-type zinc finger C7R87_2753 SM01086 C-terminal, D2-small domain, of ClpB protein C7R87_2757 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C7R87_2758 SM00917 LeuA allosteric (dimerisation) domain C7R87_2761 SM00671 Sel1-like repeats. C7R87_2789 SM00360 RNA recognition motif C7R87_2793 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C7R87_2793 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C7R87_2793 SM00493 C7R87_2793 C7R87_2796 SM00829 Enoylreductase C7R87_2798 SM00382 ATPases associated with a variety of cellular activities C7R87_2804 SM00859 Semialdehyde dehydrogenase, NAD binding domain C7R87_2807 SM00870 C7R87_2807 C7R87_2809 SM00342 helix_turn_helix, arabinose operon control protein C7R87_2810 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_2815 SM01329 C7R87_2815 C7R87_2825 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C7R87_2834 SM00363 S4 RNA-binding domain C7R87_2836 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_2842 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_2856 SM00849 Metallo-beta-lactamase superfamily C7R87_2864 SM00116 Domain in cystathionine beta-synthase and other proteins. C7R87_2864 SM01091 Transporter associated domain C7R87_2870 SM00487 DEAD-like helicases superfamily C7R87_2870 SM00490 helicase superfamily c-terminal domain C7R87_2874 SM00271 DnaJ molecular chaperone homology domain C7R87_2877 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_2877 SM00322 K homology RNA-binding domain C7R87_2878 SM01387 C7R87_2878 C7R87_2880 SM00382 ATPases associated with a variety of cellular activities C7R87_2901 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_2913 SM00967 RNA 2'-O ribose methyltransferase substrate binding C7R87_2918 SM00732 Likely ribonuclease with RNase H fold. C7R87_2922 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_2924 SM00342 helix_turn_helix, arabinose operon control protein C7R87_2927 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C7R87_2927 SM00465 GIY-YIG type nucleases (URI domain) C7R87_2945 SM00422 helix_turn_helix, mercury resistance C7R87_2950 SM00387 Histidine kinase-like ATPases C7R87_2958 SM00663 RNA polymerase I subunit A N-terminus C7R87_2963 SM00649 Ribosomal protein L11/L12 C7R87_2964 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C7R87_2964 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C7R87_2974 SM00240 Forkhead associated domain C7R87_2976 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C7R87_2978 SM00528 Domain in histone-like proteins of HNS family C7R87_2984 SM00448 cheY-homologous receiver domain C7R87_2984 SM00850 LytTr DNA-binding domain C7R87_3002 SM00899 C7R87_3002 C7R87_3008 SM00421 helix_turn_helix, Lux Regulon C7R87_3008 SM00448 cheY-homologous receiver domain C7R87_3009 SM00387 Histidine kinase-like ATPases C7R87_3009 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3010 SM00382 ATPases associated with a variety of cellular activities C7R87_3010 SM00448 cheY-homologous receiver domain C7R87_3011 SM00245 tail specific protease C7R87_3024 SM00938 Nitrogen regulatory protein P-II C7R87_3042 SM00382 ATPases associated with a variety of cellular activities C7R87_3046 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3047 SM01007 Class II Aldolase and Adducin N-terminal domain C7R87_3048 SM01130 C7R87_3048 C7R87_3056 SM00434 DNA Topoisomerase IV C7R87_3060 SM01091 Transporter associated domain C7R87_3064 SM00641 Glycosyl hydrolases family 25 C7R87_3068 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_3070 SM00422 helix_turn_helix, mercury resistance C7R87_3093 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3097 SM00382 ATPases associated with a variety of cellular activities C7R87_3107 SM00382 ATPases associated with a variety of cellular activities C7R87_3112 SM00919 Malic enzyme, NAD binding domain C7R87_3112 SM01274 C7R87_3112 C7R87_3113 SM00836 DALR anticodon binding domain C7R87_3113 SM01016 Arginyl tRNA synthetase N terminal dom C7R87_3136 SM00823 Phosphopantetheine attachment site C7R87_3136 SM00824 Thioesterase C7R87_3137 SM00823 Phosphopantetheine attachment site C7R87_3137 SM01294 C7R87_3137 C7R87_3141 SM00421 helix_turn_helix, Lux Regulon C7R87_3155 SM01005 Alanine racemase, C-terminal domain C7R87_3157 SM00344 helix_turn_helix ASNC type C7R87_3165 SM00825 Beta-ketoacyl synthase C7R87_3172 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3172 SM00895 C7R87_3172 C7R87_3176 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3176 SM00895 C7R87_3176 C7R87_3182 SM00984 UDP binding domain C7R87_3196 SM00984 UDP binding domain C7R87_3198 SM00226 Low molecular weight phosphatase family C7R87_3203 SM00644 C7R87_3203 C7R87_3220 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_3221 SM00062 Bacterial periplasmic substrate-binding proteins C7R87_3224 SM00382 ATPases associated with a variety of cellular activities C7R87_3228 SM00904 Riboflavin kinase C7R87_3233 SM00248 ankyrin repeats C7R87_3243 SM00849 Metallo-beta-lactamase superfamily C7R87_3247 SM00235 Zinc-dependent metalloprotease C7R87_3248 SM00235 Zinc-dependent metalloprotease C7R87_3252 SM01001 AIR carboxylase C7R87_3257 SM00014 Acid phosphatase homologues C7R87_3272 SM01234 C7R87_3272 C7R87_3275 SM00382 ATPases associated with a variety of cellular activities C7R87_3275 SM00760 Bacterial dnaA protein helix-turn-helix domain C7R87_3276 SM00480 DNA polymerase III beta subunit C7R87_3278 SM00387 Histidine kinase-like ATPases C7R87_3278 SM00433 TopoisomeraseII C7R87_3281 SM00382 ATPases associated with a variety of cellular activities C7R87_3313 SM00271 DnaJ molecular chaperone homology domain C7R87_3322 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3323 SM00829 Enoylreductase C7R87_3327 SM00478 endonuclease III C7R87_3327 SM00525 C7R87_3327 C7R87_3333 SM00382 ATPases associated with a variety of cellular activities C7R87_3339 SM01130 C7R87_3339 C7R87_3345 SM00346 helix_turn_helix isocitrate lyase regulation C7R87_3351 SM00833 Cobalamin synthesis protein cobW C-terminal domain C7R87_3354 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3354 SM00866 C7R87_3354 C7R87_3377 SM01060 C7R87_3377 C7R87_3378 SM00248 ankyrin repeats C7R87_3380 SM00450 Rhodanese Homology Domain C7R87_3385 SM00387 Histidine kinase-like ATPases C7R87_3385 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3386 SM00448 cheY-homologous receiver domain C7R87_3386 SM00862 Transcriptional regulatory protein, C terminal C7R87_3397 SM00257 Lysin motif C7R87_3403 SM00387 Histidine kinase-like ATPases C7R87_3403 SM00433 TopoisomeraseII C7R87_3416 SM00267 diguanylate cyclase C7R87_3438 SM00842 Cell division protein FtsA C7R87_3439 SM00864 Tubulin/FtsZ family, GTPase domain C7R87_3439 SM00865 Tubulin/FtsZ family, C-terminal domain C7R87_3448 SM00849 Metallo-beta-lactamase superfamily C7R87_3450 SM00116 Domain in cystathionine beta-synthase and other proteins. C7R87_3450 SM01240 C7R87_3450 C7R87_3455 SM00937 C7R87_3455 C7R87_3457 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C7R87_3466 SM00344 helix_turn_helix ASNC type C7R87_3469 SM00421 helix_turn_helix, Lux Regulon C7R87_3469 SM00448 cheY-homologous receiver domain C7R87_3471 SM00387 Histidine kinase-like ATPases C7R87_3471 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3471 SM00448 cheY-homologous receiver domain C7R87_3479 SM00267 diguanylate cyclase C7R87_3482 SM00829 Enoylreductase C7R87_3491 SM00530 Helix-turn-helix XRE-family like proteins C7R87_3493 SM00345 helix_turn_helix gluconate operon transcriptional repressor C7R87_3511 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3524 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3528 SM00477 DNA/RNA non-specific endonuclease C7R87_3528 SM00892 DNA/RNA non-specific endonuclease C7R87_3533 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3537 SM00357 Cold shock protein domain C7R87_3540 SM00530 Helix-turn-helix XRE-family like proteins C7R87_3542 SM00474 3'-5' exonuclease C7R87_3551 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C7R87_3551 SM00387 Histidine kinase-like ATPases C7R87_3551 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3552 SM00448 cheY-homologous receiver domain C7R87_3552 SM00862 Transcriptional regulatory protein, C terminal C7R87_3553 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_3553 SM00732 Likely ribonuclease with RNase H fold. C7R87_3554 SM00947 Carbonic anhydrase C7R87_3557 SM00382 ATPases associated with a variety of cellular activities C7R87_3558 SM00671 Sel1-like repeats. C7R87_3586 SM00842 Cell division protein FtsA C7R87_3590 SM00965 Secretin and TonB N terminus short domain C7R87_3609 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C7R87_3609 SM00954 Region found in RelA / SpoT proteins C7R87_3610 SM01409 C7R87_3610 C7R87_3611 SM00072 Guanylate kinase homologues. C7R87_3650 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7R87_3670 SM00116 Domain in cystathionine beta-synthase and other proteins. C7R87_3678 SM00861 Transketolase, pyrimidine binding domain C7R87_3680 SM00487 DEAD-like helicases superfamily C7R87_3680 SM00490 helicase superfamily c-terminal domain C7R87_3684 SM00382 ATPases associated with a variety of cellular activities C7R87_3693 SM00487 DEAD-like helicases superfamily C7R87_3693 SM00490 helicase superfamily c-terminal domain C7R87_3696 SM00563 Phosphate acyltransferases C7R87_3706 SM01403 C7R87_3706 C7R87_3710 SM01382 C7R87_3710 C7R87_3710 SM01383 C7R87_3710 C7R87_3713 SM00322 K homology RNA-binding domain C7R87_3717 SM01374 C7R87_3717 C7R87_3718 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C7R87_3731 SM00363 S4 RNA-binding domain C7R87_3731 SM01390 C7R87_3731 C7R87_3732 SM00662 RNA polymerases D C7R87_3744 SM00316 Ribosomal protein S1-like RNA-binding domain C7R87_3744 SM00955 C7R87_3744 C7R87_3754 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3764 SM00729 Elongator protein 3, MiaB family, Radical SAM C7R87_3770 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C7R87_3788 SM00878 Biotin carboxylase C-terminal domain C7R87_3795 SM00650 Ribosomal RNA adenine dimethylases C7R87_3802 SM00563 Phosphate acyltransferases C7R87_3803 SM00155 Phospholipase D. Active site motifs. C7R87_3806 SM00267 diguanylate cyclase C7R87_3824 SM00450 Rhodanese Homology Domain C7R87_3829 SM00481 DNA polymerase alpha chain like domain C7R87_3835 SM01323 C7R87_3835 C7R87_3843 SM00387 Histidine kinase-like ATPases C7R87_3843 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3874 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C7R87_3874 SM00387 Histidine kinase-like ATPases C7R87_3874 SM00388 His Kinase A (phosphoacceptor) domain C7R87_3875 SM00448 cheY-homologous receiver domain C7R87_3875 SM00862 Transcriptional regulatory protein, C terminal C7R87_3887 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3894 SM00849 Metallo-beta-lactamase superfamily C7R87_3896 SM00957 SecA DEAD-like domain C7R87_3896 SM00958 SecA preprotein cross-linking domain C7R87_3907 SM00342 helix_turn_helix, arabinose operon control protein C7R87_3910 SM00564 beta-propeller repeat C7R87_3923 SM00838 Elongation factor G C-terminus C7R87_3928 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C7R87_3928 SM01232 C7R87_3928 C7R87_3933 SM00671 Sel1-like repeats. C7R87_3944 SM00448 cheY-homologous receiver domain C7R87_3945 SM00448 cheY-homologous receiver domain C7R87_3946 SM00260 Two component signalling adaptor domain C7R87_3947 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C7R87_3959 SM00072 Guanylate kinase homologues. C7R87_3967 SM00327 von Willebrand factor (vWF) type A domain C7R87_3971 SM00481 DNA polymerase alpha chain like domain C7R87_3974 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C7R87_3974 SM00475 5'-3' exonuclease C7R87_3975 SM00305 Hint (Hedgehog/Intein) domain C-terminal region C7R87_3975 SM00306 Hint (Hedgehog/Intein) domain N-terminal region C7R87_3995 SM00382 ATPases associated with a variety of cellular activities C7R87_4023 SM00479 C7R87_4023 C7R87_4030 SM00382 ATPases associated with a variety of cellular activities C7R87_4047 SM00487 DEAD-like helicases superfamily C7R87_4047 SM00490 helicase superfamily c-terminal domain C7R87_4048 SM00470 ParB-like nuclease domain C7R87_4050 SM00470 ParB-like nuclease domain C7R87_4051 SM00382 ATPases associated with a variety of cellular activities C7R87_4086 SM00470 ParB-like nuclease domain C7R87_4097 SM00528 Domain in histone-like proteins of HNS family C7R87_4102 SM00318 Staphylococcal nuclease homologues C7R87_4139 SM00857 Resolvase, N terminal domain C7R87_4161 SM00530 Helix-turn-helix XRE-family like proteins