AM442_00020 SM00481 DNA polymerase alpha chain like domain AM442_00045 SM00450 Rhodanese Homology Domain AM442_00120 SM00267 diguanylate cyclase AM442_00135 SM00155 Phospholipase D. Active site motifs. AM442_00140 SM00563 Phosphate acyltransferases AM442_00170 SM00650 Ribosomal RNA adenine dimethylases AM442_00205 SM00878 Biotin carboxylase C-terminal domain AM442_00300 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AM442_00330 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_00430 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_00430 SM00955 AM442_00430 AM442_00490 SM00662 RNA polymerases D AM442_00495 SM00363 S4 RNA-binding domain AM442_00495 SM01390 AM442_00495 AM442_00560 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM442_00565 SM01374 AM442_00565 AM442_00585 SM00322 K homology RNA-binding domain AM442_00600 SM01382 AM442_00600 AM442_00600 SM01383 AM442_00600 AM442_00620 SM01403 AM442_00620 AM442_00675 SM00563 Phosphate acyltransferases AM442_00690 SM00487 DEAD-like helicases superfamily AM442_00690 SM00490 helicase superfamily c-terminal domain AM442_00735 SM00382 ATPases associated with a variety of cellular activities AM442_00740 SM00487 DEAD-like helicases superfamily AM442_00740 SM00490 helicase superfamily c-terminal domain AM442_00750 SM00861 Transketolase, pyrimidine binding domain AM442_00790 SM00116 Domain in cystathionine beta-synthase and other proteins. AM442_00910 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM442_01110 SM00072 Guanylate kinase homologues. AM442_01115 SM01409 AM442_01115 AM442_01125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM442_01125 SM00954 Region found in RelA / SpoT proteins AM442_01200 SM00965 Secretin and TonB N terminus short domain AM442_01220 SM00842 Cell division protein FtsA AM442_01375 SM00671 Sel1-like repeats. AM442_01380 SM00382 ATPases associated with a variety of cellular activities AM442_01395 SM00947 Carbonic anhydrase AM442_01400 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_01400 SM00732 Likely ribonuclease with RNase H fold. AM442_01410 SM00448 cheY-homologous receiver domain AM442_01410 SM00862 Transcriptional regulatory protein, C terminal AM442_01415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM442_01415 SM00387 Histidine kinase-like ATPases AM442_01415 SM00388 His Kinase A (phosphoacceptor) domain AM442_01465 SM00474 3'-5' exonuclease AM442_01475 SM00530 Helix-turn-helix XRE-family like proteins AM442_01495 SM00357 Cold shock protein domain AM442_01515 SM00342 helix_turn_helix, arabinose operon control protein AM442_01535 SM00477 DNA/RNA non-specific endonuclease AM442_01535 SM00892 DNA/RNA non-specific endonuclease AM442_01625 SM00671 Sel1-like repeats. AM442_01635 SM00342 helix_turn_helix, arabinose operon control protein AM442_01700 SM00342 helix_turn_helix, arabinose operon control protein AM442_01755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_01765 SM00530 Helix-turn-helix XRE-family like proteins AM442_01810 SM00829 Enoylreductase AM442_01825 SM00267 diguanylate cyclase AM442_01855 SM00387 Histidine kinase-like ATPases AM442_01855 SM00388 His Kinase A (phosphoacceptor) domain AM442_01855 SM00448 cheY-homologous receiver domain AM442_01865 SM00421 helix_turn_helix, Lux Regulon AM442_01865 SM00448 cheY-homologous receiver domain AM442_01880 SM00344 helix_turn_helix ASNC type AM442_01920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM442_01965 SM00116 Domain in cystathionine beta-synthase and other proteins. AM442_01965 SM01240 AM442_01965 AM442_01975 SM00849 Metallo-beta-lactamase superfamily AM442_02020 SM00864 Tubulin/FtsZ family, GTPase domain AM442_02020 SM00865 Tubulin/FtsZ family, C-terminal domain AM442_02025 SM00842 Cell division protein FtsA AM442_02120 SM00267 diguanylate cyclase AM442_02195 SM00387 Histidine kinase-like ATPases AM442_02195 SM00433 TopoisomeraseII AM442_02300 SM00448 cheY-homologous receiver domain AM442_02300 SM00862 Transcriptional regulatory protein, C terminal AM442_02305 SM00387 Histidine kinase-like ATPases AM442_02305 SM00388 His Kinase A (phosphoacceptor) domain AM442_02320 SM00450 Rhodanese Homology Domain AM442_02465 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM442_02495 SM00346 helix_turn_helix isocitrate lyase regulation AM442_02525 SM01130 AM442_02525 AM442_02550 SM00382 ATPases associated with a variety of cellular activities AM442_02580 SM00478 endonuclease III AM442_02580 SM00525 AM442_02580 AM442_02600 SM00829 Enoylreductase AM442_02605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_02650 SM00271 DnaJ molecular chaperone homology domain AM442_02800 SM00382 ATPases associated with a variety of cellular activities AM442_02815 SM00387 Histidine kinase-like ATPases AM442_02815 SM00433 TopoisomeraseII AM442_02825 SM00480 DNA polymerase III beta subunit AM442_02830 SM00382 ATPases associated with a variety of cellular activities AM442_02830 SM00760 Bacterial dnaA protein helix-turn-helix domain AM442_02845 SM01234 AM442_02845 AM442_02910 SM00014 Acid phosphatase homologues AM442_02935 SM01001 AIR carboxylase AM442_02955 SM00235 Zinc-dependent metalloprotease AM442_02960 SM00235 Zinc-dependent metalloprotease AM442_02980 SM00849 Metallo-beta-lactamase superfamily AM442_03055 SM00904 Riboflavin kinase AM442_03075 SM00382 ATPases associated with a variety of cellular activities AM442_03090 SM00062 Bacterial periplasmic substrate-binding proteins AM442_03095 SM00062 Bacterial periplasmic substrate-binding proteins AM442_03180 SM00644 AM442_03180 AM442_03205 SM00226 Low molecular weight phosphatase family AM442_03215 SM00984 UDP binding domain AM442_03290 SM00984 UDP binding domain AM442_03340 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_03340 SM00895 AM442_03340 AM442_03365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_03365 SM00895 AM442_03365 AM442_03430 SM00825 Beta-ketoacyl synthase AM442_03470 SM00344 helix_turn_helix ASNC type AM442_03480 SM01005 Alanine racemase, C-terminal domain AM442_03550 SM00421 helix_turn_helix, Lux Regulon AM442_03570 SM00823 Phosphopantetheine attachment site AM442_03570 SM01294 AM442_03570 AM442_03575 SM00823 Phosphopantetheine attachment site AM442_03575 SM00824 Thioesterase AM442_03690 SM00836 DALR anticodon binding domain AM442_03690 SM01016 Arginyl tRNA synthetase N terminal dom AM442_03695 SM00919 Malic enzyme, NAD binding domain AM442_03695 SM01274 AM442_03695 AM442_03715 SM00382 ATPases associated with a variety of cellular activities AM442_03765 SM00382 ATPases associated with a variety of cellular activities AM442_03785 SM00342 helix_turn_helix, arabinose operon control protein AM442_03900 SM00422 helix_turn_helix, mercury resistance AM442_03910 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_03930 SM00641 Glycosyl hydrolases family 25 AM442_03945 SM01091 Transporter associated domain AM442_03965 SM00434 DNA Topoisomerase IV AM442_04000 SM01130 AM442_04000 AM442_04005 SM01007 Class II Aldolase and Adducin N-terminal domain AM442_04010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_04060 SM00746 metallochaperone-like domain AM442_04065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM442_04065 SM00387 Histidine kinase-like ATPases AM442_04065 SM00388 His Kinase A (phosphoacceptor) domain AM442_04070 SM00448 cheY-homologous receiver domain AM442_04070 SM00862 Transcriptional regulatory protein, C terminal AM442_04090 SM00422 helix_turn_helix, mercury resistance AM442_04100 SM00899 AM442_04100 AM442_04160 SM00530 Helix-turn-helix XRE-family like proteins AM442_04180 SM00530 Helix-turn-helix XRE-family like proteins AM442_04195 SM00938 Nitrogen regulatory protein P-II AM442_04260 SM00245 tail specific protease AM442_04265 SM00382 ATPases associated with a variety of cellular activities AM442_04265 SM00448 cheY-homologous receiver domain AM442_04270 SM00387 Histidine kinase-like ATPases AM442_04270 SM00388 His Kinase A (phosphoacceptor) domain AM442_04275 SM00421 helix_turn_helix, Lux Regulon AM442_04275 SM00448 cheY-homologous receiver domain AM442_04305 SM00899 AM442_04305 AM442_04395 SM00448 cheY-homologous receiver domain AM442_04395 SM00850 LytTr DNA-binding domain AM442_04425 SM00528 Domain in histone-like proteins of HNS family AM442_04435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM442_04445 SM00240 Forkhead associated domain AM442_04495 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM442_04495 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM442_04500 SM00649 Ribosomal protein L11/L12 AM442_04525 SM00663 RNA polymerase I subunit A N-terminus AM442_04565 SM00387 Histidine kinase-like ATPases AM442_04590 SM00422 helix_turn_helix, mercury resistance AM442_04640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM442_04640 SM00465 GIY-YIG type nucleases (URI domain) AM442_04655 SM00342 helix_turn_helix, arabinose operon control protein AM442_04665 SM00346 helix_turn_helix isocitrate lyase regulation AM442_04685 SM00732 Likely ribonuclease with RNase H fold. AM442_04700 SM00028 Tetratricopeptide repeats AM442_04710 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM442_04770 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_04875 SM00382 ATPases associated with a variety of cellular activities AM442_04885 SM01387 AM442_04885 AM442_04890 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_04890 SM00322 K homology RNA-binding domain AM442_04905 SM00271 DnaJ molecular chaperone homology domain AM442_04925 SM00487 DEAD-like helicases superfamily AM442_04925 SM00490 helicase superfamily c-terminal domain AM442_04960 SM00116 Domain in cystathionine beta-synthase and other proteins. AM442_04960 SM01091 Transporter associated domain AM442_04995 SM00849 Metallo-beta-lactamase superfamily AM442_05065 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_05095 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_05105 SM00363 S4 RNA-binding domain AM442_05145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM442_05195 SM01329 AM442_05195 AM442_05210 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_05215 SM00342 helix_turn_helix, arabinose operon control protein AM442_05225 SM00870 AM442_05225 AM442_05240 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM442_05270 SM00382 ATPases associated with a variety of cellular activities AM442_05280 SM00829 Enoylreductase AM442_05295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM442_05295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM442_05295 SM00493 AM442_05295 AM442_05315 SM00360 RNA recognition motif AM442_05455 SM00671 Sel1-like repeats. AM442_05470 SM00917 LeuA allosteric (dimerisation) domain AM442_05475 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AM442_05495 SM00382 ATPases associated with a variety of cellular activities AM442_05495 SM00994 ClpX C4-type zinc finger AM442_05495 SM01086 C-terminal, D2-small domain, of ClpB protein AM442_05645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM442_05645 SM00245 tail specific protease AM442_05655 SM00014 Acid phosphatase homologues AM442_05665 SM00562 AM442_05665 AM442_05675 SM00028 Tetratricopeptide repeats AM442_05700 SM00564 beta-propeller repeat AM442_05725 SM00450 Rhodanese Homology Domain AM442_05735 SM00479 AM442_05735 AM442_05755 SM00382 ATPases associated with a variety of cellular activities AM442_05805 SM00052 Putative diguanylate phosphodiesterase AM442_05805 SM00267 diguanylate cyclase AM442_05830 SM01236 AM442_05830 AM442_05905 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AM442_05905 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AM442_05945 SM00073 Histidine Phosphotransfer domain AM442_05945 SM00387 Histidine kinase-like ATPases AM442_05945 SM00388 His Kinase A (phosphoacceptor) domain AM442_05945 SM00448 cheY-homologous receiver domain AM442_05965 SM00954 Region found in RelA / SpoT proteins AM442_05980 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM442_06025 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM442_06080 SM00873 B3/4 domain AM442_06080 SM00874 tRNA synthetase B5 domain AM442_06080 SM00896 Ferredoxin-fold anticodon binding domain AM442_06085 SM00411 bacterial (prokaryotic) histone like domain AM442_06100 SM00357 Cold shock protein domain AM442_06100 SM00382 ATPases associated with a variety of cellular activities AM442_06100 SM00959 Rho termination factor, N-terminal domain AM442_06120 SM00977 TilS substrate C-terminal domain AM442_06135 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM442_06135 SM00474 3'-5' exonuclease AM442_06135 SM00475 5'-3' exonuclease AM442_06135 SM00482 DNA polymerase A domain AM442_06155 SM00382 ATPases associated with a variety of cellular activities AM442_06165 SM00347 helix_turn_helix multiple antibiotic resistance protein AM442_06185 SM00331 Sigma factor PP2C-like phosphatases AM442_06490 SM00903 Flavin reductase like domain AM442_06625 SM00448 cheY-homologous receiver domain AM442_06625 SM00862 Transcriptional regulatory protein, C terminal AM442_06630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM442_06630 SM00387 Histidine kinase-like ATPases AM442_06630 SM00388 His Kinase A (phosphoacceptor) domain AM442_06640 SM00267 diguanylate cyclase AM442_06665 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM442_06670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM442_06670 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM442_06715 SM00357 Cold shock protein domain AM442_06875 SM00382 ATPases associated with a variety of cellular activities AM442_06875 SM00962 SRP54-type protein, GTPase domain AM442_06875 SM00963 SRP54-type protein, helical bundle domain AM442_06895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_06905 SM00771 ZipA, C-terminal domain (FtsZ-binding) AM442_06910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM442_06910 SM00292 breast cancer carboxy-terminal domain AM442_06910 SM00532 Ligase N family AM442_06960 SM00363 S4 RNA-binding domain AM442_06995 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM442_07000 SM00822 AM442_07000 AM442_07010 SM00257 Lysin motif AM442_07055 SM01400 AM442_07055 AM442_07085 SM00028 Tetratricopeptide repeats AM442_07095 SM00400 zinc finger AM442_07095 SM00493 AM442_07095 AM442_07105 SM00363 S4 RNA-binding domain AM442_07195 SM00382 ATPases associated with a variety of cellular activities AM442_07230 SM00990 AM442_07230 AM442_07425 SM00232 JAB/MPN domain AM442_07495 SM01329 AM442_07495 AM442_07555 SM00825 Beta-ketoacyl synthase AM442_07575 SM00838 Elongation factor G C-terminus AM442_07575 SM00889 Elongation factor G, domain IV AM442_07615 SM00843 AM442_07615 AM442_07650 SM00563 Phosphate acyltransferases AM442_07725 SM00382 ATPases associated with a variety of cellular activities AM442_07770 SM01004 Delta-aminolevulinic acid dehydratase AM442_07850 SM01130 AM442_07850 AM442_07870 SM00965 Secretin and TonB N terminus short domain AM442_07990 SM01322 AM442_07990 AM442_08030 SM00346 helix_turn_helix isocitrate lyase regulation AM442_08050 SM00822 AM442_08050 AM442_08120 SM00342 helix_turn_helix, arabinose operon control protein AM442_08150 SM00822 AM442_08150 AM442_08165 SM00861 Transketolase, pyrimidine binding domain AM442_08170 SM01018 B12 binding domain AM442_08230 SM00947 Carbonic anhydrase AM442_08240 SM00382 ATPases associated with a variety of cellular activities AM442_08350 SM01091 Transporter associated domain AM442_08405 SM00988 UreE urease accessory protein, N-terminal domain AM442_08455 SM00478 endonuclease III AM442_08465 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM442_08490 SM00382 ATPases associated with a variety of cellular activities AM442_08490 SM00464 Found in ATP-dependent protease La (LON) AM442_08550 SM01011 Aminopeptidase P, N-terminal domain AM442_08570 SM00422 helix_turn_helix, mercury resistance AM442_08625 SM00479 AM442_08625 AM442_08630 SM00257 Lysin motif AM442_08650 SM00382 ATPases associated with a variety of cellular activities AM442_08670 SM00479 AM442_08670 AM442_08680 SM00267 diguanylate cyclase AM442_08810 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_08810 SM00895 AM442_08810 AM442_08825 SM00344 helix_turn_helix ASNC type AM442_08850 SM00342 helix_turn_helix, arabinose operon control protein AM442_08865 SM00858 AM442_08865 AM442_08875 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM442_08880 SM01130 AM442_08880 AM442_08890 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_08890 SM00895 AM442_08890 AM442_08950 SM00347 helix_turn_helix multiple antibiotic resistance protein AM442_08955 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_08955 SM00895 AM442_08955 AM442_09015 SM00342 helix_turn_helix, arabinose operon control protein AM442_09110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM442_09115 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM442_09125 SM00788 Adenylosuccinate synthetase AM442_09145 SM00100 Cyclic nucleotide-monophosphate binding domain AM442_09145 SM00419 helix_turn_helix, cAMP Regulatory protein AM442_09165 SM00382 ATPases associated with a variety of cellular activities AM442_09165 SM01086 C-terminal, D2-small domain, of ClpB protein AM442_09180 SM00981 AM442_09180 AM442_09260 SM00382 ATPases associated with a variety of cellular activities AM442_09260 SM00487 DEAD-like helicases superfamily AM442_09260 SM00490 helicase superfamily c-terminal domain AM442_09260 SM00847 Helicase associated domain (HA2) Add an annotation AM442_09345 SM00382 ATPases associated with a variety of cellular activities AM442_09345 SM00989 AM442_09345 AM442_09360 SM00422 helix_turn_helix, mercury resistance AM442_09415 SM00530 Helix-turn-helix XRE-family like proteins AM442_09440 SM00357 Cold shock protein domain AM442_09525 SM00840 AM442_09525 AM442_09530 SM00116 Domain in cystathionine beta-synthase and other proteins. AM442_09550 SM00382 ATPases associated with a variety of cellular activities AM442_09560 SM00382 ATPases associated with a variety of cellular activities AM442_09605 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AM442_09605 SM00534 ATPase domain of DNA mismatch repair MUTS family AM442_09610 SM00344 helix_turn_helix ASNC type AM442_09620 SM00052 Putative diguanylate phosphodiesterase AM442_09660 SM00342 helix_turn_helix, arabinose operon control protein AM442_09680 SM00972 Spore Coat Protein U domain AM442_09685 SM00422 helix_turn_helix, mercury resistance AM442_09785 SM00796 Allophanate hydrolase subunit 1 AM442_09785 SM00797 Allophanate hydrolase subunit 2 AM442_09790 SM00878 Biotin carboxylase C-terminal domain AM442_09800 SM00671 Sel1-like repeats. AM442_09820 SM00829 Enoylreductase AM442_09835 SM00796 Allophanate hydrolase subunit 1 AM442_09835 SM00797 Allophanate hydrolase subunit 2 AM442_09835 SM00878 Biotin carboxylase C-terminal domain AM442_09870 SM00382 ATPases associated with a variety of cellular activities AM442_09950 SM00382 ATPases associated with a variety of cellular activities AM442_09950 SM01086 C-terminal, D2-small domain, of ClpB protein AM442_09985 SM00248 ankyrin repeats AM442_10025 SM00422 helix_turn_helix, mercury resistance AM442_10040 SM01130 AM442_10040 AM442_10050 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10050 SM00895 AM442_10050 AM442_10075 SM00342 helix_turn_helix, arabinose operon control protein AM442_10195 SM01060 AM442_10195 AM442_10210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10210 SM00895 AM442_10210 AM442_10225 SM00903 Flavin reductase like domain AM442_10275 SM00346 helix_turn_helix isocitrate lyase regulation AM442_10285 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10285 SM00866 AM442_10285 AM442_10295 SM00382 ATPases associated with a variety of cellular activities AM442_10345 SM00346 helix_turn_helix isocitrate lyase regulation AM442_10375 SM01236 AM442_10375 AM442_10380 SM00346 helix_turn_helix isocitrate lyase regulation AM442_10415 SM00882 Coenzyme A transferase AM442_10420 SM00882 Coenzyme A transferase AM442_10465 SM00878 Biotin carboxylase C-terminal domain AM442_10550 SM01236 AM442_10550 AM442_10555 SM01060 AM442_10555 AM442_10570 SM00384 DNA binding domain with preference for A/T rich regions AM442_10590 SM00344 helix_turn_helix ASNC type AM442_10600 SM00387 Histidine kinase-like ATPases AM442_10600 SM00388 His Kinase A (phosphoacceptor) domain AM442_10600 SM00448 cheY-homologous receiver domain AM442_10605 SM00421 helix_turn_helix, Lux Regulon AM442_10605 SM00448 cheY-homologous receiver domain AM442_10630 SM00382 ATPases associated with a variety of cellular activities AM442_10635 SM00062 Bacterial periplasmic substrate-binding proteins AM442_10640 SM00062 Bacterial periplasmic substrate-binding proteins AM442_10680 SM00450 Rhodanese Homology Domain AM442_10685 SM00822 AM442_10685 AM442_10720 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10780 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM442_10800 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_10880 SM00895 AM442_10880 AM442_10910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM442_10960 SM00481 DNA polymerase alpha chain like domain AM442_10965 SM00870 AM442_10965 AM442_11000 SM00342 helix_turn_helix, arabinose operon control protein AM442_11015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM442_11050 SM00100 Cyclic nucleotide-monophosphate binding domain AM442_11050 SM00419 helix_turn_helix, cAMP Regulatory protein AM442_11070 SM00382 ATPases associated with a variety of cellular activities AM442_11070 SM00930 AM442_11070 AM442_11105 SM00062 Bacterial periplasmic substrate-binding proteins AM442_11120 SM00382 ATPases associated with a variety of cellular activities AM442_11130 SM00344 helix_turn_helix ASNC type AM442_11140 SM00563 Phosphate acyltransferases AM442_11160 SM01236 AM442_11160 AM442_11250 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_11250 SM00876 Biotin and Thiamin Synthesis associated domain AM442_11270 SM00530 Helix-turn-helix XRE-family like proteins AM442_11305 SM00861 Transketolase, pyrimidine binding domain AM442_11315 SM00867 YceI-like domain AM442_11350 SM00344 helix_turn_helix ASNC type AM442_11370 SM00342 helix_turn_helix, arabinose operon control protein AM442_11380 SM00382 ATPases associated with a variety of cellular activities AM442_11400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM442_11410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AM442_11470 SM00470 ParB-like nuclease domain AM442_11485 SM00382 ATPases associated with a variety of cellular activities AM442_11545 SM00986 Uracil DNA glycosylase superfamily AM442_11545 SM00987 UreE urease accessory protein, C-terminal domain AM442_11570 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_11575 SM00411 bacterial (prokaryotic) histone like domain AM442_11585 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM442_11600 SM00342 helix_turn_helix, arabinose operon control protein AM442_11675 SM00382 ATPases associated with a variety of cellular activities AM442_11730 SM00487 DEAD-like helicases superfamily AM442_11730 SM00490 helicase superfamily c-terminal domain AM442_11730 SM00982 AM442_11730 AM442_11730 SM01058 CarD-like/TRCF domain AM442_11740 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AM442_11755 SM00271 DnaJ molecular chaperone homology domain AM442_11790 SM00411 bacterial (prokaryotic) histone like domain AM442_11800 SM00342 helix_turn_helix, arabinose operon control protein AM442_11890 SM01006 Siderophore biosynthesis protein domain AM442_11915 SM00855 Phosphoglycerate mutase family AM442_11975 SM00382 ATPases associated with a variety of cellular activities AM442_12015 SM01324 AM442_12015 AM442_12140 SM00822 AM442_12140 AM442_12150 SM00342 helix_turn_helix, arabinose operon control protein AM442_12160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM442_12160 SM00387 Histidine kinase-like ATPases AM442_12160 SM00388 His Kinase A (phosphoacceptor) domain AM442_12165 SM00448 cheY-homologous receiver domain AM442_12165 SM00862 Transcriptional regulatory protein, C terminal AM442_12295 SM00354 helix_turn _helix lactose operon repressor AM442_12365 SM00354 helix_turn _helix lactose operon repressor AM442_12410 SM00155 Phospholipase D. Active site motifs. AM442_12435 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_12470 SM00487 DEAD-like helicases superfamily AM442_12510 SM00382 ATPases associated with a variety of cellular activities AM442_12545 SM00342 helix_turn_helix, arabinose operon control protein AM442_12555 SM00903 Flavin reductase like domain AM442_12580 SM00342 helix_turn_helix, arabinose operon control protein AM442_12625 SM00882 Coenzyme A transferase AM442_12630 SM00882 Coenzyme A transferase AM442_12685 SM00567 E-Z type HEAT repeats AM442_12690 SM00382 ATPases associated with a variety of cellular activities AM442_12715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_12715 SM00866 AM442_12715 AM442_12735 SM00342 helix_turn_helix, arabinose operon control protein AM442_12760 SM00849 Metallo-beta-lactamase superfamily AM442_12765 SM00382 ATPases associated with a variety of cellular activities AM442_12775 SM00829 Enoylreductase AM442_12795 SM00861 Transketolase, pyrimidine binding domain AM442_12810 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_12825 SM00267 diguanylate cyclase AM442_12850 SM00382 ATPases associated with a variety of cellular activities AM442_12905 SM01060 AM442_12905 AM442_12925 SM00829 Enoylreductase AM442_12950 SM00091 PAS domain AM442_12950 SM00382 ATPases associated with a variety of cellular activities AM442_12965 SM00855 Phosphoglycerate mutase family AM442_13000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_13000 SM00895 AM442_13000 AM442_13015 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM442_13030 SM00882 Coenzyme A transferase AM442_13035 SM00882 Coenzyme A transferase AM442_13065 SM00342 helix_turn_helix, arabinose operon control protein AM442_13070 SM00903 Flavin reductase like domain AM442_13115 SM00347 helix_turn_helix multiple antibiotic resistance protein AM442_13135 SM00855 Phosphoglycerate mutase family AM442_13155 SM00346 helix_turn_helix isocitrate lyase regulation AM442_13160 SM00849 Metallo-beta-lactamase superfamily AM442_13180 SM00564 beta-propeller repeat AM442_13190 SM00710 Parallel beta-helix repeats AM442_13225 SM00998 Adenylosuccinate lyase C-terminus AM442_13235 SM00882 Coenzyme A transferase AM442_13240 SM00882 Coenzyme A transferase AM442_13260 SM01192 AM442_13260 AM442_13260 SM01193 AM442_13260 AM442_13325 SM00382 ATPases associated with a variety of cellular activities AM442_13325 SM01086 C-terminal, D2-small domain, of ClpB protein AM442_13340 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM442_13380 SM01264 AM442_13380 AM442_13455 SM00382 ATPases associated with a variety of cellular activities AM442_13455 SM00962 SRP54-type protein, GTPase domain AM442_13455 SM00963 SRP54-type protein, helical bundle domain AM442_13480 SM00116 Domain in cystathionine beta-synthase and other proteins. AM442_13610 SM00411 bacterial (prokaryotic) histone like domain AM442_13810 SM00347 helix_turn_helix multiple antibiotic resistance protein AM442_13825 SM00052 Putative diguanylate phosphodiesterase AM442_13825 SM00091 PAS domain AM442_13825 SM00267 diguanylate cyclase AM442_13870 SM00344 helix_turn_helix ASNC type AM442_13910 SM00363 S4 RNA-binding domain AM442_13915 SM00382 ATPases associated with a variety of cellular activities AM442_13950 SM00935 Outer membrane protein (OmpH-like) AM442_13960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM442_13990 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_14000 SM00091 PAS domain AM442_14000 SM00387 Histidine kinase-like ATPases AM442_14000 SM00388 His Kinase A (phosphoacceptor) domain AM442_14005 SM00382 ATPases associated with a variety of cellular activities AM442_14005 SM00448 cheY-homologous receiver domain AM442_14095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_14105 SM00852 Probable molybdopterin binding domain AM442_14110 SM00852 Probable molybdopterin binding domain AM442_14125 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_14130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM442_14140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM442_14160 SM00448 cheY-homologous receiver domain AM442_14160 SM01012 AM442_14160 AM442_14185 SM00878 Biotin carboxylase C-terminal domain AM442_14205 SM01236 AM442_14205 AM442_14250 SM00226 Low molecular weight phosphatase family AM442_14275 SM00382 ATPases associated with a variety of cellular activities AM442_14305 SM00822 AM442_14305 AM442_14335 SM00344 helix_turn_helix ASNC type AM442_14350 SM00831 Cation transporter/ATPase, N-terminus AM442_14375 SM00382 ATPases associated with a variety of cellular activities AM442_14460 SM00344 helix_turn_helix ASNC type AM442_14465 SM00830 Chorismate mutase type II AM442_14510 SM00382 ATPases associated with a variety of cellular activities AM442_14525 SM00862 Transcriptional regulatory protein, C terminal AM442_14595 SM00853 MutL C terminal dimerisation domain AM442_14595 SM01340 AM442_14595 AM442_14620 SM00363 S4 RNA-binding domain AM442_14770 SM00530 Helix-turn-helix XRE-family like proteins AM442_15010 SM00530 Helix-turn-helix XRE-family like proteins AM442_15030 SM00382 ATPases associated with a variety of cellular activities AM442_15125 SM00479 AM442_15125 AM442_15185 SM01230 AM442_15185 AM442_15190 SM00448 cheY-homologous receiver domain AM442_15190 SM00862 Transcriptional regulatory protein, C terminal AM442_15195 SM00387 Histidine kinase-like ATPases AM442_15195 SM00388 His Kinase A (phosphoacceptor) domain AM442_15220 SM00905 Dihydroneopterin aldolase AM442_15235 SM00903 Flavin reductase like domain AM442_15250 SM00822 AM442_15250 AM442_15255 SM00342 helix_turn_helix, arabinose operon control protein AM442_15265 SM00937 AM442_15265 AM442_15390 SM01005 Alanine racemase, C-terminal domain AM442_15400 SM00460 Transglutaminase/protease-like homologues AM442_15425 SM01228 AM442_15425 AM442_15450 SM00798 AICARFT/IMPCHase bienzyme AM442_15450 SM00851 MGS-like domain AM442_15455 SM01209 AM442_15455 AM442_15455 SM01210 AM442_15455 AM442_15465 SM00382 ATPases associated with a variety of cellular activities AM442_15465 SM00930 AM442_15465 AM442_15475 SM00849 Metallo-beta-lactamase superfamily AM442_15585 SM00972 Spore Coat Protein U domain AM442_15630 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_15630 SM00895 AM442_15630 AM442_15650 SM00342 helix_turn_helix, arabinose operon control protein AM442_15665 SM01034 Sensors of blue-light using FAD AM442_15785 SM00220 Serine/Threonine protein kinases, catalytic domain AM442_15865 SM00855 Phosphoglycerate mutase family AM442_15885 SM00487 DEAD-like helicases superfamily AM442_15885 SM00490 helicase superfamily c-terminal domain AM442_15890 SM00357 Cold shock protein domain AM442_15955 SM00830 Chorismate mutase type II AM442_16015 SM00387 Histidine kinase-like ATPases AM442_16015 SM00388 His Kinase A (phosphoacceptor) domain AM442_16020 SM00448 cheY-homologous receiver domain AM442_16020 SM00862 Transcriptional regulatory protein, C terminal AM442_16030 SM00382 ATPases associated with a variety of cellular activities AM442_16055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM442_16075 SM00382 ATPases associated with a variety of cellular activities AM442_16090 SM00062 Bacterial periplasmic substrate-binding proteins AM442_16130 SM00479 AM442_16130 AM442_16170 SM00232 JAB/MPN domain AM442_16310 SM00507 HNH nucleases AM442_16355 SM00507 HNH nucleases AM442_16380 SM00382 ATPases associated with a variety of cellular activities AM442_16400 SM00530 Helix-turn-helix XRE-family like proteins AM442_16485 SM00382 ATPases associated with a variety of cellular activities AM442_16535 SM00342 helix_turn_helix, arabinose operon control protein AM442_16580 SM00729 Elongator protein 3, MiaB family, Radical SAM AM442_16600 SM00996 S-adenosyl-L-homocysteine hydrolase AM442_16600 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM442_16615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM442_16615 SM00091 PAS domain AM442_16625 SM00052 Putative diguanylate phosphodiesterase AM442_16625 SM00267 diguanylate cyclase AM442_16630 SM00919 Malic enzyme, NAD binding domain AM442_16630 SM01274 AM442_16630 AM442_16640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM442_16695 SM01230 AM442_16695 AM442_16735 SM00463 Small MutS-related domain AM442_16745 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM442_16750 SM01092 CO dehydrogenase flavoprotein C-terminal domain AM442_16810 SM00382 ATPases associated with a variety of cellular activities AM442_16815 SM00382 ATPases associated with a variety of cellular activities AM442_16860 SM00382 ATPases associated with a variety of cellular activities AM442_16935 SM00841 Elongation factor P, C-terminal AM442_16935 SM01185 AM442_16935 AM442_16950 SM00052 Putative diguanylate phosphodiesterase AM442_16985 SM00257 Lysin motif AM442_17005 SM00936 Penicillin-binding protein 5, C-terminal domain AM442_17055 SM00382 ATPases associated with a variety of cellular activities AM442_17085 SM00344 helix_turn_helix ASNC type AM442_17140 SM00487 DEAD-like helicases superfamily AM442_17140 SM00490 helicase superfamily c-terminal domain AM442_17170 SM00880 AM442_17170 AM442_17170 SM01118 AM442_17170 AM442_17225 SM01329 AM442_17225 AM442_17335 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM442_17355 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM442_17370 SM00487 DEAD-like helicases superfamily AM442_17370 SM00490 helicase superfamily c-terminal domain AM442_17380 SM00267 diguanylate cyclase AM442_17450 SM00358 Double-stranded RNA binding motif AM442_17450 SM00535 Ribonuclease III family AM442_17465 SM00838 Elongation factor G C-terminus AM442_17475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM442_17525 SM00382 ATPases associated with a variety of cellular activities AM442_17595 SM01211 AM442_17595 AM442_17600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM442_17605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM442_17610 SM00382 ATPases associated with a variety of cellular activities AM442_17725 SM00849 Metallo-beta-lactamase superfamily AM442_17730 SM00382 ATPases associated with a variety of cellular activities AM442_17810 SM00434 DNA Topoisomerase IV AM442_17815 SM00893 Electron transfer flavoprotein domain AM442_17820 SM00893 Electron transfer flavoprotein domain AM442_17855 SM00382 ATPases associated with a variety of cellular activities AM442_17860 SM00978 AM442_17860 AM442_18035 SM00849 Metallo-beta-lactamase superfamily AM442_18050 SM00883 Chaperonin 10 Kd subunit AM442_18070 SM00046 Diacylglycerol kinase catalytic domain (presumed) AM442_18145 SM00382 ATPases associated with a variety of cellular activities AM442_18155 SM01103 AM442_18155 AM442_18175 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AM442_18180 SM00851 MGS-like domain AM442_18180 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM442_18210 SM00854 Bacterial capsule synthesis protein PGA_cap AM442_18245 SM00881 CoA binding domain AM442_18265 SM00861 Transketolase, pyrimidine binding domain AM442_18310 SM00450 Rhodanese Homology Domain AM442_18425 SM00014 Acid phosphatase homologues AM442_18460 SM00822 AM442_18460 AM442_18515 SM00387 Histidine kinase-like ATPases AM442_18515 SM00388 His Kinase A (phosphoacceptor) domain AM442_18520 SM00448 cheY-homologous receiver domain AM442_18520 SM00862 Transcriptional regulatory protein, C terminal AM442_18555 SM00563 Phosphate acyltransferases AM442_18570 SM00244 prohibitin homologues AM442_18605 SM00829 Enoylreductase AM442_18610 SM00342 helix_turn_helix, arabinose operon control protein AM442_18630 SM00342 helix_turn_helix, arabinose operon control protein AM442_18665 SM00316 Ribosomal protein S1-like RNA-binding domain AM442_18700 SM00845 GatB domain AM442_18850 SM00073 Histidine Phosphotransfer domain AM442_18850 SM00260 Two component signalling adaptor domain AM442_18850 SM00387 Histidine kinase-like ATPases AM442_18850 SM00448 cheY-homologous receiver domain AM442_18850 SM01231 AM442_18850 AM442_18855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM442_18860 SM00260 Two component signalling adaptor domain AM442_18865 SM00448 cheY-homologous receiver domain AM442_18870 SM00448 cheY-homologous receiver domain AM442_18925 SM00671 Sel1-like repeats. AM442_18950 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM442_18950 SM01232 AM442_18950 AM442_18970 SM00838 Elongation factor G C-terminus AM442_19030 SM00564 beta-propeller repeat AM442_19045 SM00342 helix_turn_helix, arabinose operon control protein AM442_19095 SM00957 SecA DEAD-like domain AM442_19095 SM00958 SecA preprotein cross-linking domain AM442_19105 SM00849 Metallo-beta-lactamase superfamily AM442_19135 SM00342 helix_turn_helix, arabinose operon control protein AM442_19195 SM00448 cheY-homologous receiver domain AM442_19195 SM00862 Transcriptional regulatory protein, C terminal AM442_19200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM442_19200 SM00387 Histidine kinase-like ATPases AM442_19200 SM00388 His Kinase A (phosphoacceptor) domain AM442_19335 SM00387 Histidine kinase-like ATPases AM442_19335 SM00388 His Kinase A (phosphoacceptor) domain AM442_19395 SM01323 AM442_19395 AM442_19445 SM00530 Helix-turn-helix XRE-family like proteins AM442_19525 SM00470 ParB-like nuclease domain AM442_19585 SM00528 Domain in histone-like proteins of HNS family AM442_19605 SM00318 Staphylococcal nuclease homologues AM442_19805 SM00857 Resolvase, N terminal domain