locus-tag class description AM462_00020 PF02350 UDP-N-acetylglucosamine 2-epimerase AM462_00050 PF00875 DNA photolyase AM462_00050 PF03441 FAD binding domain of DNA photolyase AM462_00055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_00060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_00065 PF00768 D-alanyl-D-alanine carboxypeptidase AM462_00065 PF07943 Penicillin-binding protein 5, C-terminal domain AM462_00075 PF03971 Monomeric isocitrate dehydrogenase AM462_00080 PF00849 RNA pseudouridylate synthase AM462_00085 PF00180 Isocitrate/isopropylmalate dehydrogenase AM462_00105 PF06779 Uncharacterised MFS-type transporter YbfB AM462_00110 PF03466 LysR substrate binding domain AM462_00110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_00120 PF02567 Phenazine biosynthesis-like protein AM462_00125 PF05193 Peptidase M16 inactive domain AM462_00125 PF00675 Insulinase (Peptidase family M16) AM462_00150 PF01867 CRISPR associated protein Cas1 AM462_00160 PF09611 CRISPR-associated protein (Cas_Csy1) AM462_00165 PF09614 CRISPR-associated protein (Cas_Csy2) AM462_00170 PF09615 CRISPR-associated protein (Cas_Csy3) AM462_00180 PF02581 Thiamine monophosphate synthase AM462_00185 PF00202 Aminotransferase class-III AM462_00195 PF00849 RNA pseudouridylate synthase AM462_00200 PF18337 RapA N-terminal Tudor like domain AM462_00200 PF18339 RapA N-terminal Tudor like domain 1 AM462_00200 PF00176 SNF2 family N-terminal domain AM462_00200 PF12137 RNA polymerase recycling family C-terminal AM462_00200 PF00271 Helicase conserved C-terminal domain AM462_00210 PF00440 Bacterial regulatory proteins, tetR family AM462_00215 PF00175 Oxidoreductase NAD-binding domain AM462_00215 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_00215 PF00970 Oxidoreductase FAD-binding domain AM462_00220 PF00487 Fatty acid desaturase AM462_00230 PF00440 Bacterial regulatory proteins, tetR family AM462_00230 PF17754 MftR C-terminal domain AM462_00240 PF00202 Aminotransferase class-III AM462_00245 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM462_00250 PF00171 Aldehyde dehydrogenase family AM462_00255 PF01037 Lrp/AsnC ligand binding domain AM462_00260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM462_00260 PF00205 Thiamine pyrophosphate enzyme, central domain AM462_00260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM462_00265 PF00324 Amino acid permease AM462_00270 PF12849 PBP superfamily domain AM462_00275 PF00528 Binding-protein-dependent transport system inner membrane component AM462_00280 PF00528 Binding-protein-dependent transport system inner membrane component AM462_00285 PF00005 ABC transporter AM462_00290 PF01343 Peptidase family S49 AM462_00290 PF08496 Peptidase family S49 N-terminal AM462_00305 PF00206 Lyase AM462_00305 PF08328 Adenylosuccinate lyase C-terminal AM462_00310 PF04356 Protein of unknown function (DUF489) AM462_00320 PF00293 NUDIX domain AM462_00320 PF13344 Haloacid dehalogenase-like hydrolase AM462_00325 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_00330 PF00768 D-alanyl-D-alanine carboxypeptidase AM462_00330 PF07943 Penicillin-binding protein 5, C-terminal domain AM462_00345 PF01975 Survival protein SurE AM462_00350 PF01551 Peptidase family M23 AM462_00350 PF01476 LysM domain AM462_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_00355 PF03466 LysR substrate binding domain AM462_00360 PF13654 AAA domain AM462_00360 PF05362 Lon protease (S16) C-terminal proteolytic domain AM462_00365 PF07690 Major Facilitator Superfamily AM462_00370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM462_00375 PF13593 SBF-like CPA transporter family (DUF4137) AM462_00380 PF01197 Ribosomal protein L31 AM462_00385 PF12792 CSS motif domain associated with EAL AM462_00385 PF00563 EAL domain AM462_00395 PF04055 Radical SAM superfamily AM462_00400 PF09285 Elongation factor P, C-terminal AM462_00400 PF01132 Elongation factor P (EF-P) OB domain AM462_00400 PF08207 Elongation factor P (EF-P) KOW-like domain AM462_00405 PF02554 Carbon starvation protein CstA AM462_00405 PF13722 5TM C-terminal transporter carbon starvation CstA AM462_00410 PF04328 Selenoprotein, putative AM462_00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_00420 PF03466 LysR substrate binding domain AM462_00425 PF00557 Metallopeptidase family M24 AM462_00430 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_00435 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_00440 PF00355 Rieske [2Fe-2S] domain AM462_00440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM462_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_00450 PF18113 Rubredoxin binding C-terminal domain AM462_00455 PF01266 FAD dependent oxidoreductase AM462_00455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM462_00475 PF00892 EamA-like transporter family AM462_00485 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM462_00510 PF17954 Quercetinase C-terminal cupin domain AM462_00510 PF02678 Pirin AM462_00515 PF00291 Pyridoxal-phosphate dependent enzyme AM462_00520 PF13309 HTH domain AM462_00520 PF08348 YheO-like PAS domain AM462_00530 PF00501 AMP-binding enzyme AM462_00530 PF13193 AMP-binding enzyme C-terminal domain AM462_00530 PF00668 Condensation domain AM462_00530 PF00550 Phosphopantetheine attachment site AM462_00535 PF00501 AMP-binding enzyme AM462_00535 PF00975 Thioesterase domain AM462_00535 PF00550 Phosphopantetheine attachment site AM462_00535 PF00668 Condensation domain AM462_00535 PF13193 AMP-binding enzyme C-terminal domain AM462_00540 PF01032 FecCD transport family AM462_00545 PF01032 FecCD transport family AM462_00550 PF00005 ABC transporter AM462_00555 PF01497 Periplasmic binding protein AM462_00560 PF00593 TonB dependent receptor AM462_00560 PF07715 TonB-dependent Receptor Plug Domain AM462_00565 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM462_00570 PF00501 AMP-binding enzyme AM462_00570 PF00550 Phosphopantetheine attachment site AM462_00570 PF00668 Condensation domain AM462_00575 PF13193 AMP-binding enzyme C-terminal domain AM462_00575 PF00501 AMP-binding enzyme AM462_00580 PF00857 Isochorismatase family AM462_00580 PF00550 Phosphopantetheine attachment site AM462_00585 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM462_00595 PF00664 ABC transporter transmembrane region AM462_00595 PF00005 ABC transporter AM462_00600 PF00005 ABC transporter AM462_00600 PF00664 ABC transporter transmembrane region AM462_00605 PF00975 Thioesterase domain AM462_00615 PF00425 chorismate binding enzyme AM462_00625 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM462_00630 PF05675 Protein of unknown function (DUF817) AM462_00660 PF01799 [2Fe-2S] binding domain AM462_00660 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_00665 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM462_00665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM462_00680 PF00218 Indole-3-glycerol phosphate synthase AM462_00685 PF00591 Glycosyl transferase family, a/b domain AM462_00685 PF02885 Glycosyl transferase family, helical bundle domain AM462_00690 PF00593 TonB dependent receptor AM462_00690 PF07715 TonB-dependent Receptor Plug Domain AM462_00695 PF11838 ERAP1-like C-terminal domain AM462_00695 PF01433 Peptidase family M1 domain AM462_00700 PF00117 Glutamine amidotransferase class-I AM462_00710 PF00854 POT family AM462_00720 PF04345 Chorismate lyase AM462_00725 PF01040 UbiA prenyltransferase family AM462_00760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM462_00760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM462_00765 PF01784 NIF3 (NGG1p interacting factor 3) AM462_00770 PF13180 PDZ domain AM462_00775 PF01743 Poly A polymerase head domain AM462_00775 PF12627 Probable RNA and SrmB- binding site of polymerase A AM462_00780 PF01515 Phosphate acetyl/butaryl transferase AM462_00780 PF03949 Malic enzyme, NAD binding domain AM462_00780 PF00390 Malic enzyme, N-terminal domain AM462_00785 PF03707 Bacterial signalling protein N terminal repeat AM462_00785 PF00563 EAL domain AM462_00785 PF00990 Diguanylate cyclase, GGDEF domain AM462_00790 PF04452 RNA methyltransferase AM462_00795 PF02219 Methylenetetrahydrofolate reductase AM462_00800 PF05221 S-adenosyl-L-homocysteine hydrolase AM462_00800 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM462_00815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_00815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_00815 PF09317 Domain of unknown function (DUF1974) AM462_00820 PF04055 Radical SAM superfamily AM462_00825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM462_00825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_00835 PF07690 Major Facilitator Superfamily AM462_00845 PF00557 Metallopeptidase family M24 AM462_00850 PF00318 Ribosomal protein S2 AM462_00855 PF00889 Elongation factor TS AM462_00865 PF12833 Helix-turn-helix domain AM462_00885 PF03330 Lytic transglycolase AM462_00885 PF05036 Sporulation related domain AM462_00890 PF13406 Transglycosylase SLT domain AM462_00895 PF01098 Cell cycle protein AM462_00905 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM462_00905 PF14489 QueF-like protein AM462_00910 PF01061 ABC-2 type transporter AM462_00915 PF00005 ABC transporter AM462_00920 PF00589 Phage integrase family AM462_00980 PF12161 HsdM N-terminal domain AM462_00980 PF02384 N-6 DNA Methylase AM462_01010 PF03796 DnaB-like helicase C terminal domain AM462_01010 PF14528 LAGLIDADG-like domain AM462_01010 PF00772 DnaB-like helicase N terminal domain AM462_01055 PF00149 Calcineurin-like phosphoesterase AM462_01240 PF01476 LysM domain AM462_01240 PF08525 Opacity-associated protein A N-terminal motif AM462_01240 PF01551 Peptidase family M23 AM462_01320 PF00464 Serine hydroxymethyltransferase AM462_01325 PF02321 Outer membrane efflux protein AM462_01330 PF00873 AcrB/AcrD/AcrF family AM462_01335 PF13533 Biotin-lipoyl like AM462_01345 PF03466 LysR substrate binding domain AM462_01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_01350 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM462_01355 PF00528 Binding-protein-dependent transport system inner membrane component AM462_01360 PF00528 Binding-protein-dependent transport system inner membrane component AM462_01365 PF00005 ABC transporter AM462_01370 PF00893 Small Multidrug Resistance protein AM462_01375 PF00037 4Fe-4S binding domain AM462_01385 PF00392 Bacterial regulatory proteins, gntR family AM462_01385 PF00155 Aminotransferase class I and II AM462_01390 PF02567 Phenazine biosynthesis-like protein AM462_01395 PF00970 Oxidoreductase FAD-binding domain AM462_01395 PF00175 Oxidoreductase NAD-binding domain AM462_01400 PF01980 tRNA-methyltransferase O AM462_01400 PF18389 TrmO C-terminal domain AM462_01410 PF00437 Type II/IV secretion system protein AM462_01420 PF00072 Response regulator receiver domain AM462_01420 PF00486 Transcriptional regulatory protein, C terminal AM462_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_01425 PF08521 Two-component sensor kinase N-terminal AM462_01425 PF00512 His Kinase A (phospho-acceptor) domain AM462_01435 PF00293 NUDIX domain AM462_01445 PF14814 Bifunctional transglycosylase second domain AM462_01445 PF00912 Transglycosylase AM462_01445 PF00905 Penicillin binding protein transpeptidase domain AM462_01450 PF01513 ATP-NAD kinase AM462_01455 PF07023 Protein of unknown function (DUF1315) AM462_01460 PF02885 Glycosyl transferase family, helical bundle domain AM462_01460 PF00591 Glycosyl transferase family, a/b domain AM462_01470 PF00375 Sodium:dicarboxylate symporter family AM462_01475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_01475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_01475 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_01480 PF00756 Putative esterase AM462_01485 PF01817 Chorismate mutase type II AM462_01485 PF00800 Prephenate dehydratase AM462_01485 PF01842 ACT domain AM462_01490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM462_01500 PF01546 Peptidase family M20/M25/M40 AM462_01500 PF07687 Peptidase dimerisation domain AM462_01505 PF00753 Metallo-beta-lactamase superfamily AM462_01515 PF03883 Peroxide stress protein YaaA AM462_01520 PF05690 Thiazole biosynthesis protein ThiG AM462_01530 PF04241 Protein of unknown function (DUF423) AM462_01535 PF00140 Sigma-70 factor, region 1.2 AM462_01535 PF04542 Sigma-70 region 2 AM462_01535 PF04545 Sigma-70, region 4 AM462_01545 PF00313 'Cold-shock' DNA-binding domain AM462_01550 PF00270 DEAD/DEAH box helicase AM462_01550 PF00271 Helicase conserved C-terminal domain AM462_01560 PF00881 Nitroreductase family AM462_01565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM462_01565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM462_01585 PF01180 Dihydroorotate dehydrogenase AM462_01590 PF02674 Colicin V production protein AM462_01595 PF00156 Phosphoribosyl transferase domain AM462_01610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM462_01610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM462_01615 PF01435 Peptidase family M48 AM462_01620 PF09424 Yqey-like protein AM462_01625 PF01165 Ribosomal protein S21 AM462_01630 PF00814 Glycoprotease family AM462_01650 PF00069 Protein kinase domain AM462_01675 PF03466 LysR substrate binding domain AM462_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_01680 PF00202 Aminotransferase class-III AM462_01685 PF00171 Aldehyde dehydrogenase family AM462_01690 PF00324 Amino acid permease AM462_01720 PF04076 Bacterial OB fold (BOF) protein AM462_01745 PF00561 alpha/beta hydrolase fold AM462_01750 PF03616 Sodium/glutamate symporter AM462_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_01760 PF03466 LysR substrate binding domain AM462_01765 PF00248 Aldo/keto reductase family AM462_01770 PF00106 short chain dehydrogenase AM462_01785 PF07729 FCD domain AM462_01785 PF00392 Bacterial regulatory proteins, gntR family AM462_01845 PF08946 Osmosensory transporter coiled coil AM462_01845 PF00083 Sugar (and other) transporter AM462_01870 PF04403 Paraquat-inducible protein A AM462_01875 PF02470 MlaD protein AM462_01885 PF00576 HIUase/Transthyretin family AM462_01895 PF00486 Transcriptional regulatory protein, C terminal AM462_01895 PF00072 Response regulator receiver domain AM462_01900 PF00512 His Kinase A (phospho-acceptor) domain AM462_01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_01900 PF00672 HAMP domain AM462_01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_01940 PF00512 His Kinase A (phospho-acceptor) domain AM462_01940 PF08521 Two-component sensor kinase N-terminal AM462_01945 PF00486 Transcriptional regulatory protein, C terminal AM462_01945 PF00072 Response regulator receiver domain AM462_01965 PF01177 Asp/Glu/Hydantoin racemase AM462_01970 PF00892 EamA-like transporter family AM462_01975 PF07995 Glucose / Sorbosone dehydrogenase AM462_01995 PF00375 Sodium:dicarboxylate symporter family AM462_02005 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM462_02005 PF00753 Metallo-beta-lactamase superfamily AM462_02010 PF00528 Binding-protein-dependent transport system inner membrane component AM462_02015 PF09383 NIL domain AM462_02015 PF00005 ABC transporter AM462_02020 PF03180 NLPA lipoprotein AM462_02025 PF02844 Phosphoribosylglycinamide synthetase, N domain AM462_02025 PF02843 Phosphoribosylglycinamide synthetase, C domain AM462_02025 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM462_02030 PF01808 AICARFT/IMPCHase bienzyme AM462_02030 PF02142 MGS-like domain AM462_02035 PF02954 Bacterial regulatory protein, Fis family AM462_02055 PF13932 GidA associated domain AM462_02055 PF01134 Glucose inhibited division protein A AM462_02065 PF14403 Circularly permuted ATP-grasp type 2 AM462_02075 PF08379 Bacterial transglutaminase-like N-terminal region AM462_02075 PF01841 Transglutaminase-like superfamily AM462_02085 PF01168 Alanine racemase, N-terminal domain AM462_02085 PF00842 Alanine racemase, C-terminal domain AM462_02090 PF03796 DnaB-like helicase C terminal domain AM462_02090 PF00772 DnaB-like helicase N terminal domain AM462_02095 PF01281 Ribosomal protein L9, N-terminal domain AM462_02095 PF03948 Ribosomal protein L9, C-terminal domain AM462_02100 PF01084 Ribosomal protein S18 AM462_02105 PF01250 Ribosomal protein S6 AM462_02110 PF01040 UbiA prenyltransferase family AM462_02115 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM462_02120 PF00510 Cytochrome c oxidase subunit III AM462_02125 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM462_02130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM462_02130 PF06481 COX Aromatic Rich Motif AM462_02140 PF02896 PEP-utilising enzyme, TIM barrel domain AM462_02140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM462_02140 PF00391 PEP-utilising enzyme, mobile domain AM462_02145 PF03618 Kinase/pyrophosphorylase AM462_02155 PF01522 Polysaccharide deacetylase AM462_02155 PF14883 Hypothetical glycosyl hydrolase family 13 AM462_02160 PF00535 Glycosyl transferase family 2 AM462_02165 PF13994 PgaD-like protein AM462_02175 PF00296 Luciferase-like monooxygenase AM462_02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_02195 PF03466 LysR substrate binding domain AM462_02205 PF00472 RF-1 domain AM462_02205 PF03462 PCRF domain AM462_02210 PF17827 PrmC N-terminal domain AM462_02210 PF13847 Methyltransferase domain AM462_02215 PF00528 Binding-protein-dependent transport system inner membrane component AM462_02220 PF09084 NMT1/THI5 like AM462_02230 PF12833 Helix-turn-helix domain AM462_02235 PF00106 short chain dehydrogenase AM462_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_02240 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_02245 PF00501 AMP-binding enzyme AM462_02245 PF13193 AMP-binding enzyme C-terminal domain AM462_02250 PF01613 Flavin reductase like domain AM462_02255 PF00899 ThiF family AM462_02260 PF03109 ABC1 family AM462_02275 PF03814 Potassium-transporting ATPase A subunit AM462_02285 PF02669 K+-transporting ATPase, c chain AM462_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_02290 PF00512 His Kinase A (phospho-acceptor) domain AM462_02290 PF02702 Osmosensitive K+ channel His kinase sensor domain AM462_02290 PF13493 Domain of unknown function (DUF4118) AM462_02295 PF00486 Transcriptional regulatory protein, C terminal AM462_02295 PF00072 Response regulator receiver domain AM462_02300 PF00120 Glutamine synthetase, catalytic domain AM462_02310 PF03232 Ubiquinone biosynthesis protein COQ7 AM462_02315 PF07690 Major Facilitator Superfamily AM462_02320 PF01103 Surface antigen AM462_02320 PF07244 Surface antigen variable number repeat AM462_02320 PF17243 POTRA domain TamA domain 1 AM462_02340 PF11791 Aconitate B N-terminal domain AM462_02340 PF00330 Aconitase family (aconitate hydratase) AM462_02340 PF06434 Aconitate hydratase 2 N-terminus AM462_02350 PF00027 Cyclic nucleotide-binding domain AM462_02350 PF00520 Ion transport protein AM462_02355 PF07690 Major Facilitator Superfamily AM462_02445 PF10124 Mu-like prophage major head subunit gpT AM462_02460 PF05069 Phage virion morphogenesis family AM462_02465 PF04233 Phage Mu protein F like protein AM462_02470 PF06074 Protein of unknown function (DUF935) AM462_02480 PF03237 Terminase-like family AM462_02545 PF01471 Putative peptidoglycan binding domain AM462_02545 PF13401 AAA domain AM462_02570 PF00216 Bacterial DNA-binding protein AM462_02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_02615 PF03466 LysR substrate binding domain AM462_02620 PF04284 Protein of unknown function (DUF441) AM462_02630 PF00849 RNA pseudouridylate synthase AM462_02630 PF01479 S4 domain AM462_02645 PF00849 RNA pseudouridylate synthase AM462_02645 PF01479 S4 domain AM462_02650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM462_02655 PF01119 DNA mismatch repair protein, C-terminal domain AM462_02655 PF08676 MutL C terminal dimerisation domain AM462_02665 PF17209 Hfq protein AM462_02675 PF00881 Nitroreductase family AM462_02685 PF00149 Calcineurin-like phosphoesterase AM462_02690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM462_02695 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM462_02695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM462_02700 PF02540 NAD synthase AM462_02700 PF00958 GMP synthase C terminal domain AM462_02700 PF00117 Glutamine amidotransferase class-I AM462_02705 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM462_02710 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM462_02715 PF13520 Amino acid permease AM462_02720 PF00171 Aldehyde dehydrogenase family AM462_02735 PF00465 Iron-containing alcohol dehydrogenase AM462_02740 PF14493 Helix-turn-helix domain AM462_02740 PF05970 PIF1-like helicase AM462_02750 PF02110 Hydroxyethylthiazole kinase family AM462_02765 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM462_02765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM462_02765 PF01433 Peptidase family M1 domain AM462_02770 PF13936 Helix-turn-helix domain AM462_02770 PF00665 Integrase core domain AM462_02785 PF00577 Outer membrane usher protein AM462_02785 PF13954 PapC N-terminal domain AM462_02785 PF13953 PapC C-terminal domain AM462_02810 PF01817 Chorismate mutase type II AM462_02815 PF01037 Lrp/AsnC ligand binding domain AM462_02830 PF02224 Cytidylate kinase AM462_02850 PF00440 Bacterial regulatory proteins, tetR family AM462_02855 PF07715 TonB-dependent Receptor Plug Domain AM462_02855 PF00593 TonB dependent receptor AM462_02860 PF00924 Mechanosensitive ion channel AM462_02895 PF07715 TonB-dependent Receptor Plug Domain AM462_02895 PF00593 TonB dependent receptor AM462_02915 PF00005 ABC transporter AM462_02915 PF12848 ABC transporter AM462_02920 PF00582 Universal stress protein family AM462_02935 PF00690 Cation transporter/ATPase, N-terminus AM462_02935 PF00689 Cation transporting ATPase, C-terminus AM462_02940 PF02308 MgtC family AM462_02945 PF03594 Benzoate membrane transport protein AM462_02950 PF01037 Lrp/AsnC ligand binding domain AM462_02955 PF01810 LysE type translocator AM462_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_02965 PF03466 LysR substrate binding domain AM462_02975 PF02803 Thiolase, C-terminal domain AM462_02975 PF00108 Thiolase, N-terminal domain AM462_03000 PF07690 Major Facilitator Superfamily AM462_03005 PF12170 DNA polymerase III tau subunit V interacting with alpha AM462_03005 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM462_03005 PF12169 DNA polymerase III subunits gamma and tau domain III AM462_03010 PF05506 Domain of unknown function (DUF756) AM462_03010 PF04185 Phosphoesterase family AM462_03015 PF03061 Thioesterase superfamily AM462_03020 PF00465 Iron-containing alcohol dehydrogenase AM462_03030 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM462_03035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM462_03035 PF01565 FAD binding domain AM462_03050 PF01645 Conserved region in glutamate synthase AM462_03090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_03090 PF00289 Biotin carboxylase, N-terminal domain AM462_03090 PF02785 Biotin carboxylase C-terminal domain AM462_03095 PF00364 Biotin-requiring enzyme AM462_03100 PF01220 Dehydroquinase class II AM462_03105 PF11799 impB/mucB/samB family C-terminal domain AM462_03105 PF00817 impB/mucB/samB family AM462_03105 PF13438 Domain of unknown function (DUF4113) AM462_03115 PF00005 ABC transporter AM462_03120 PF00072 Response regulator receiver domain AM462_03120 PF00486 Transcriptional regulatory protein, C terminal AM462_03130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM462_03130 PF13806 Rieske-like [2Fe-2S] domain AM462_03130 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM462_03130 PF04324 BFD-like [2Fe-2S] binding domain AM462_03130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM462_03130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_03135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM462_03135 PF04324 BFD-like [2Fe-2S] binding domain AM462_03135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM462_03135 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM462_03135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_03140 PF04324 BFD-like [2Fe-2S] binding domain AM462_03140 PF01568 Molydopterin dinucleotide binding domain AM462_03140 PF00384 Molybdopterin oxidoreductase AM462_03140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM462_03145 PF12804 MobA-like NTP transferase domain AM462_03150 PF01568 Molydopterin dinucleotide binding domain AM462_03150 PF00384 Molybdopterin oxidoreductase AM462_03150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM462_03155 PF04055 Radical SAM superfamily AM462_03155 PF06463 Molybdenum Cofactor Synthesis C AM462_03165 PF02391 MoaE protein AM462_03170 PF00994 Probable molybdopterin binding domain AM462_03170 PF01967 MoaC family AM462_03175 PF03453 MoeA N-terminal region (domain I and II) AM462_03175 PF03454 MoeA C-terminal region (domain IV) AM462_03175 PF00994 Probable molybdopterin binding domain AM462_03180 PF01638 HxlR-like helix-turn-helix AM462_03185 PF00155 Aminotransferase class I and II AM462_03185 PF00392 Bacterial regulatory proteins, gntR family AM462_03190 PF00892 EamA-like transporter family AM462_03210 PF02635 DsrE/DsrF-like family AM462_03215 PF16363 GDP-mannose 4,6 dehydratase AM462_03220 PF00206 Lyase AM462_03220 PF10415 Fumarase C C-terminus AM462_03245 PF01266 FAD dependent oxidoreductase AM462_03255 PF02542 YgbB family AM462_03265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM462_03265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM462_03270 PF00440 Bacterial regulatory proteins, tetR family AM462_03275 PF02954 Bacterial regulatory protein, Fis family AM462_03275 PF00072 Response regulator receiver domain AM462_03275 PF00158 Sigma-54 interaction domain AM462_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_03280 PF00512 His Kinase A (phospho-acceptor) domain AM462_03280 PF00989 PAS fold AM462_03290 PF04055 Radical SAM superfamily AM462_03290 PF18693 TRAM domain AM462_03290 PF00919 Uncharacterized protein family UPF0004 AM462_03295 PF00696 Amino acid kinase family AM462_03300 PF01765 Ribosome recycling factor AM462_03305 PF01255 Putative undecaprenyl diphosphate synthase AM462_03315 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM462_03315 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM462_03315 PF13288 DXP reductoisomerase C-terminal domain AM462_03320 PF02163 Peptidase family M50 AM462_03320 PF17820 PDZ domain AM462_03320 PF13180 PDZ domain AM462_03325 PF07244 Surface antigen variable number repeat AM462_03325 PF01103 Surface antigen AM462_03335 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM462_03335 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_03340 PF07977 FabA-like domain AM462_03345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM462_03345 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_03360 PF02631 RecX family AM462_03365 PF00154 recA bacterial DNA recombination protein AM462_03370 PF01479 S4 domain AM462_03375 PF13419 Haloacid dehalogenase-like hydrolase AM462_03400 PF01037 Lrp/AsnC ligand binding domain AM462_03405 PF00266 Aminotransferase class-V AM462_03410 PF00324 Amino acid permease AM462_03420 PF05922 Peptidase inhibitor I9 AM462_03420 PF00082 Subtilase family AM462_03425 PF00916 Sulfate permease family AM462_03425 PF01740 STAS domain AM462_03430 PF02586 SOS response associated peptidase (SRAP) AM462_03435 PF07995 Glucose / Sorbosone dehydrogenase AM462_03445 PF03707 Bacterial signalling protein N terminal repeat AM462_03445 PF00563 EAL domain AM462_03445 PF00990 Diguanylate cyclase, GGDEF domain AM462_03465 PF02378 Phosphotransferase system, EIIC AM462_03465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM462_03470 PF00294 pfkB family carbohydrate kinase AM462_03475 PF05524 PEP-utilising enzyme, N-terminal AM462_03475 PF00391 PEP-utilising enzyme, mobile domain AM462_03475 PF02896 PEP-utilising enzyme, TIM barrel domain AM462_03475 PF00381 PTS HPr component phosphorylation site AM462_03475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM462_03500 PF05525 Branched-chain amino acid transport protein AM462_03505 PF00557 Metallopeptidase family M24 AM462_03510 PF03466 LysR substrate binding domain AM462_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_03520 PF00462 Glutaredoxin AM462_03525 PF00202 Aminotransferase class-III AM462_03530 PF00478 IMP dehydrogenase / GMP reductase domain AM462_03530 PF00571 CBS domain AM462_03555 PF02881 SRP54-type protein, helical bundle domain AM462_03555 PF00448 SRP54-type protein, GTPase domain AM462_03565 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM462_03575 PF08173 Membrane bound YbgT-like protein AM462_03580 PF02322 Cytochrome bd terminal oxidase subunit II AM462_03585 PF01654 Cytochrome bd terminal oxidase subunit I AM462_03595 PF07290 Protein of unknown function (DUF1449) AM462_03605 PF00294 pfkB family carbohydrate kinase AM462_03615 PF08367 Peptidase M16C associated AM462_03615 PF00675 Insulinase (Peptidase family M16) AM462_03615 PF05193 Peptidase M16 inactive domain AM462_03620 PF02253 Phospholipase A1 AM462_03625 PF02386 Cation transport protein AM462_03630 PF02254 TrkA-N domain AM462_03630 PF02080 TrkA-C domain AM462_03635 PF00585 C-terminal regulatory domain of Threonine dehydratase AM462_03635 PF00291 Pyridoxal-phosphate dependent enzyme AM462_03640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM462_03655 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM462_03655 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM462_03665 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM462_03670 PF10431 C-terminal, D2-small domain, of ClpB protein AM462_03670 PF00004 ATPase family associated with various cellular activities (AAA) AM462_03670 PF07724 AAA domain (Cdc48 subfamily) AM462_03670 PF17871 AAA lid domain AM462_03670 PF02861 Clp amino terminal domain, pathogenicity island component AM462_03675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM462_03680 PF00793 DAHP synthetase I family AM462_03695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_03695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_03725 PF00117 Glutamine amidotransferase class-I AM462_03725 PF06418 CTP synthase N-terminus AM462_03730 PF00793 DAHP synthetase I family AM462_03735 PF03952 Enolase, N-terminal domain AM462_03735 PF00113 Enolase, C-terminal TIM barrel domain AM462_03740 PF04239 Protein of unknown function (DUF421) AM462_03745 PF04977 Septum formation initiator AM462_03750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM462_03755 PF01144 Coenzyme A transferase AM462_03760 PF01144 Coenzyme A transferase AM462_03765 PF00108 Thiolase, N-terminal domain AM462_03765 PF02803 Thiolase, C-terminal domain AM462_03770 PF10397 Adenylosuccinate lyase C-terminus AM462_03770 PF00206 Lyase AM462_03775 PF00561 alpha/beta hydrolase fold AM462_03780 PF07690 Major Facilitator Superfamily AM462_03785 PF02627 Carboxymuconolactone decarboxylase family AM462_03790 PF00775 Dioxygenase AM462_03790 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM462_03795 PF00775 Dioxygenase AM462_03800 PF01487 Type I 3-dehydroquinase AM462_03805 PF05048 Periplasmic copper-binding protein (NosD) AM462_03810 PF04966 Carbohydrate-selective porin, OprB family AM462_03815 PF13360 PQQ-like domain AM462_03815 PF01011 PQQ enzyme repeat AM462_03825 PF04143 Sulphur transport AM462_03835 PF00753 Metallo-beta-lactamase superfamily AM462_03840 PF09339 IclR helix-turn-helix domain AM462_03840 PF01614 Bacterial transcriptional regulator AM462_03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_03845 PF03466 LysR substrate binding domain AM462_03850 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_03850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_03850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_03865 PF00106 short chain dehydrogenase AM462_03875 PF07690 Major Facilitator Superfamily AM462_03895 PF01425 Amidase AM462_03900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM462_03915 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM462_03915 PF00355 Rieske [2Fe-2S] domain AM462_03930 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_03930 PF00175 Oxidoreductase NAD-binding domain AM462_03935 PF01613 Flavin reductase like domain AM462_03940 PF12833 Helix-turn-helix domain AM462_03940 PF02311 AraC-like ligand binding domain AM462_03945 PF07833 Copper amine oxidase N-terminal domain AM462_03945 PF01179 Copper amine oxidase, enzyme domain AM462_03945 PF02728 Copper amine oxidase, N3 domain AM462_03945 PF02727 Copper amine oxidase, N2 domain AM462_03955 PF00171 Aldehyde dehydrogenase family AM462_03960 PF01804 Penicillin amidase AM462_03965 PF12146 Serine aminopeptidase, S33 AM462_03970 PF00108 Thiolase, N-terminal domain AM462_03970 PF02803 Thiolase, C-terminal domain AM462_03980 PF01144 Coenzyme A transferase AM462_03985 PF01144 Coenzyme A transferase AM462_03990 PF00775 Dioxygenase AM462_03990 PF04444 Catechol dioxygenase N terminus AM462_03995 PF02426 Muconolactone delta-isomerase AM462_04000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM462_04000 PF13378 Enolase C-terminal domain-like AM462_04005 PF03466 LysR substrate binding domain AM462_04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04015 PF07729 FCD domain AM462_04015 PF00392 Bacterial regulatory proteins, gntR family AM462_04020 PF00920 Dehydratase family AM462_04025 PF07690 Major Facilitator Superfamily AM462_04035 PF00171 Aldehyde dehydrogenase family AM462_04045 PF00561 alpha/beta hydrolase fold AM462_04050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_04050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_04055 PF00106 short chain dehydrogenase AM462_04065 PF00376 MerR family regulatory protein AM462_04065 PF09278 MerR, DNA binding AM462_04075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_04085 PF12706 Beta-lactamase superfamily domain AM462_04090 PF08359 YsiA-like protein, C-terminal region AM462_04090 PF00440 Bacterial regulatory proteins, tetR family AM462_04095 PF12833 Helix-turn-helix domain AM462_04095 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM462_04105 PF06314 Acetoacetate decarboxylase (ADC) AM462_04115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_04120 PF07995 Glucose / Sorbosone dehydrogenase AM462_04135 PF00857 Isochorismatase family AM462_04140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04140 PF03466 LysR substrate binding domain AM462_04145 PF07995 Glucose / Sorbosone dehydrogenase AM462_04150 PF02254 TrkA-N domain AM462_04150 PF00999 Sodium/hydrogen exchanger family AM462_04160 PF07687 Peptidase dimerisation domain AM462_04160 PF01546 Peptidase family M20/M25/M40 AM462_04210 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AM462_04215 PF07690 Major Facilitator Superfamily AM462_04220 PF04909 Amidohydrolase AM462_04240 PF08721 TnsA endonuclease C terminal AM462_04240 PF08722 TnsA endonuclease N terminal AM462_04245 PF00665 Integrase core domain AM462_04250 PF11426 Tn7 transposition regulator TnsC AM462_04250 PF13401 AAA domain AM462_04255 PF06527 TniQ AM462_04255 PF15978 Tn7-like transposition protein D AM462_04260 PF18623 TnsE C-terminal domain AM462_04295 PF00583 Acetyltransferase (GNAT) family AM462_04300 PF00186 Dihydrofolate reductase AM462_04305 PF13495 Phage integrase, N-terminal SAM-like domain AM462_04305 PF00589 Phage integrase family AM462_04310 PF00589 Phage integrase family AM462_04310 PF13495 Phage integrase, N-terminal SAM-like domain AM462_04330 PF03466 LysR substrate binding domain AM462_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_04345 PF00529 HlyD membrane-fusion protein of T1SS AM462_04360 PF00171 Aldehyde dehydrogenase family AM462_04365 PF00920 Dehydratase family AM462_04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04375 PF03466 LysR substrate binding domain AM462_04380 PF01370 NAD dependent epimerase/dehydratase family AM462_04385 PF07690 Major Facilitator Superfamily AM462_04390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM462_04390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM462_04405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM462_04405 PF14572 Phosphoribosyl synthetase-associated domain AM462_04410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM462_04425 PF00196 Bacterial regulatory proteins, luxR family AM462_04425 PF03472 Autoinducer binding domain AM462_04430 PF01425 Amidase AM462_04435 PF13533 Biotin-lipoyl like AM462_04440 PF07690 Major Facilitator Superfamily AM462_04465 PF01975 Survival protein SurE AM462_04475 PF02824 TGS domain AM462_04475 PF04607 Region found in RelA / SpoT proteins AM462_04475 PF13291 ACT domain AM462_04480 PF02151 UvrB/uvrC motif AM462_04480 PF17757 UvrB interaction domain AM462_04480 PF12344 Ultra-violet resistance protein B AM462_04480 PF04851 Type III restriction enzyme, res subunit AM462_04480 PF00271 Helicase conserved C-terminal domain AM462_04515 PF13673 Acetyltransferase (GNAT) domain AM462_04520 PF12146 Serine aminopeptidase, S33 AM462_04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04525 PF03466 LysR substrate binding domain AM462_04540 PF12146 Serine aminopeptidase, S33 AM462_04545 PF12833 Helix-turn-helix domain AM462_04545 PF02311 AraC-like ligand binding domain AM462_04555 PF16527 Two-component sensor protein CpxA, periplasmic domain AM462_04555 PF00512 His Kinase A (phospho-acceptor) domain AM462_04555 PF00672 HAMP domain AM462_04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_04560 PF00072 Response regulator receiver domain AM462_04560 PF00486 Transcriptional regulatory protein, C terminal AM462_04565 PF00529 HlyD membrane-fusion protein of T1SS AM462_04565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_04570 PF00873 AcrB/AcrD/AcrF family AM462_04575 PF02321 Outer membrane efflux protein AM462_04580 PF12146 Serine aminopeptidase, S33 AM462_04585 PF00743 Flavin-binding monooxygenase-like AM462_04600 PF01266 FAD dependent oxidoreductase AM462_04680 PF16970 Type-1 fimbrial protein, A AM462_04685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM462_04685 PF02753 Pili assembly chaperone PapD, C-terminal domain AM462_04690 PF13954 PapC N-terminal domain AM462_04690 PF13953 PapC C-terminal domain AM462_04690 PF00577 Outer membrane usher protein AM462_04705 PF00107 Zinc-binding dehydrogenase AM462_04705 PF08240 Alcohol dehydrogenase GroES-like domain AM462_04715 PF00199 Catalase AM462_04730 PF13091 PLD-like domain AM462_04750 PF01244 Membrane dipeptidase (Peptidase family M19) AM462_04755 PF13186 Iron-sulfur cluster-binding domain AM462_04755 PF04055 Radical SAM superfamily AM462_04760 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM462_04765 PF03070 TENA/THI-4/PQQC family AM462_04770 PF12706 Beta-lactamase superfamily domain AM462_04775 PF08042 PqqA family AM462_04780 PF13090 Polyphosphate kinase C-terminal domain 2 AM462_04780 PF02503 Polyphosphate kinase middle domain AM462_04780 PF13089 Polyphosphate kinase N-terminal domain AM462_04780 PF17941 Polyphosphate kinase C-terminal domain 1 AM462_04785 PF00149 Calcineurin-like phosphoesterase AM462_04795 PF00550 Phosphopantetheine attachment site AM462_04795 PF00857 Isochorismatase family AM462_04800 PF00106 short chain dehydrogenase AM462_04805 PF00005 ABC transporter AM462_04805 PF03459 TOBE domain AM462_04810 PF00528 Binding-protein-dependent transport system inner membrane component AM462_04825 PF03459 TOBE domain AM462_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM462_04830 PF00355 Rieske [2Fe-2S] domain AM462_04835 PF00866 Ring hydroxylating beta subunit AM462_04840 PF00175 Oxidoreductase NAD-binding domain AM462_04840 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_04840 PF00970 Oxidoreductase FAD-binding domain AM462_04845 PF14525 AraC-binding-like domain AM462_04845 PF12833 Helix-turn-helix domain AM462_04855 PF01613 Flavin reductase like domain AM462_04870 PF01738 Dienelactone hydrolase family AM462_04875 PF07690 Major Facilitator Superfamily AM462_04880 PF06719 AraC-type transcriptional regulator N-terminus AM462_04880 PF12833 Helix-turn-helix domain AM462_04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04900 PF03466 LysR substrate binding domain AM462_04905 PF01144 Coenzyme A transferase AM462_04910 PF01144 Coenzyme A transferase AM462_04915 PF02667 Short chain fatty acid transporter AM462_04920 PF00108 Thiolase, N-terminal domain AM462_04920 PF02803 Thiolase, C-terminal domain AM462_04925 PF03466 LysR substrate binding domain AM462_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_04930 PF03466 LysR substrate binding domain AM462_04945 PF00206 Lyase AM462_04945 PF10415 Fumarase C C-terminus AM462_04950 PF00593 TonB dependent receptor AM462_04950 PF07715 TonB-dependent Receptor Plug Domain AM462_04955 PF00083 Sugar (and other) transporter AM462_04970 PF00005 ABC transporter AM462_04975 PF00528 Binding-protein-dependent transport system inner membrane component AM462_04980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM462_05005 PF02525 Flavodoxin-like fold AM462_05010 PF01638 HxlR-like helix-turn-helix AM462_05015 PF06445 GyrI-like small molecule binding domain AM462_05015 PF12833 Helix-turn-helix domain AM462_05030 PF01925 Sulfite exporter TauE/SafE AM462_05035 PF04273 Putative phosphatase (DUF442) AM462_05035 PF00753 Metallo-beta-lactamase superfamily AM462_05040 PF00753 Metallo-beta-lactamase superfamily AM462_05040 PF04273 Putative phosphatase (DUF442) AM462_05045 PF00072 Response regulator receiver domain AM462_05045 PF02954 Bacterial regulatory protein, Fis family AM462_05045 PF00158 Sigma-54 interaction domain AM462_05050 PF01062 Bestrophin, RFP-TM, chloride channel AM462_05055 PF08240 Alcohol dehydrogenase GroES-like domain AM462_05055 PF00107 Zinc-binding dehydrogenase AM462_05060 PF00106 short chain dehydrogenase AM462_05065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM462_05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_05070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM462_05070 PF02817 e3 binding domain AM462_05070 PF00364 Biotin-requiring enzyme AM462_05075 PF02779 Transketolase, pyrimidine binding domain AM462_05075 PF02780 Transketolase, C-terminal domain AM462_05080 PF00676 Dehydrogenase E1 component AM462_05085 PF04055 Radical SAM superfamily AM462_05100 PF00990 Diguanylate cyclase, GGDEF domain AM462_05100 PF08448 PAS fold AM462_05105 PF01264 Chorismate synthase AM462_05110 PF05175 Methyltransferase small domain AM462_05115 PF00291 Pyridoxal-phosphate dependent enzyme AM462_05125 PF00004 ATPase family associated with various cellular activities (AAA) AM462_05125 PF17862 AAA+ lid domain AM462_05125 PF01434 Peptidase family M41 AM462_05135 PF05166 YcgL domain AM462_05155 PF01612 3'-5' exonuclease AM462_05155 PF00570 HRDC domain AM462_05160 PF02132 RecR protein AM462_05160 PF13662 Toprim domain AM462_05165 PF02575 YbaB/EbfC DNA-binding family AM462_05175 PF01053 Cys/Met metabolism PLP-dependent enzyme AM462_05180 PF00561 alpha/beta hydrolase fold AM462_05185 PF08241 Methyltransferase domain AM462_05215 PF01230 HIT domain AM462_05240 PF02684 Lipid-A-disaccharide synthetase AM462_05245 PF00593 TonB dependent receptor AM462_05245 PF07715 TonB-dependent Receptor Plug Domain AM462_05265 PF01925 Sulfite exporter TauE/SafE AM462_05270 PF00793 DAHP synthetase I family AM462_05275 PF02654 Cobalamin-5-phosphate synthase AM462_05285 PF00300 Histidine phosphatase superfamily (branch 1) AM462_05290 PF02277 Phosphoribosyltransferase AM462_05295 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM462_05305 PF13419 Haloacid dehalogenase-like hydrolase AM462_05330 PF07715 TonB-dependent Receptor Plug Domain AM462_05330 PF00593 TonB dependent receptor AM462_05335 PF03737 Aldolase/RraA AM462_05345 PF04183 IucA / IucC family AM462_05345 PF06276 Ferric iron reductase FhuF-like transporter AM462_05350 PF04183 IucA / IucC family AM462_05350 PF06276 Ferric iron reductase FhuF-like transporter AM462_05355 PF07690 Major Facilitator Superfamily AM462_05360 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM462_05365 PF04183 IucA / IucC family AM462_05365 PF06276 Ferric iron reductase FhuF-like transporter AM462_05370 PF04073 Aminoacyl-tRNA editing domain AM462_05380 PF03109 ABC1 family AM462_05385 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_05385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_05385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_05390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_05390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_05390 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_05395 PF00487 Fatty acid desaturase AM462_05400 PF12852 Cupin AM462_05400 PF12833 Helix-turn-helix domain AM462_05405 PF09312 SurA N-terminal domain AM462_05405 PF00639 PPIC-type PPIASE domain AM462_05410 PF00216 Bacterial DNA-binding protein AM462_05425 PF02082 Transcriptional regulator AM462_05430 PF00266 Aminotransferase class-V AM462_05435 PF01592 NifU-like N terminal domain AM462_05440 PF01521 Iron-sulphur cluster biosynthesis AM462_05445 PF00226 DnaJ domain AM462_05445 PF07743 HSCB C-terminal oligomerisation domain AM462_05450 PF00012 Hsp70 protein AM462_05455 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_05460 PF00211 Adenylate and Guanylate cyclase catalytic domain AM462_05470 PF03461 TRCF domain AM462_05470 PF00271 Helicase conserved C-terminal domain AM462_05470 PF02559 CarD-like/TRCF domain AM462_05470 PF00270 DEAD/DEAH box helicase AM462_05470 PF17757 UvrB interaction domain AM462_05490 PF03737 Aldolase/RraA AM462_05495 PF13460 NAD(P)H-binding AM462_05500 PF01649 Ribosomal protein S20 AM462_05510 PF00459 Inositol monophosphatase family AM462_05525 PF00005 ABC transporter AM462_05525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM462_05530 PF00528 Binding-protein-dependent transport system inner membrane component AM462_05535 PF00528 Binding-protein-dependent transport system inner membrane component AM462_05540 PF01432 Peptidase family M3 AM462_05555 PF00593 TonB dependent receptor AM462_05555 PF07715 TonB-dependent Receptor Plug Domain AM462_05560 PF03544 Gram-negative bacterial TonB protein C-terminal AM462_05565 PF01618 MotA/TolQ/ExbB proton channel family AM462_05570 PF02472 Biopolymer transport protein ExbD/TolR AM462_05575 PF02472 Biopolymer transport protein ExbD/TolR AM462_05585 PF01274 Malate synthase AM462_05590 PF03969 AFG1-like ATPase AM462_05600 PF00743 Flavin-binding monooxygenase-like AM462_05610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM462_05620 PF00216 Bacterial DNA-binding protein AM462_05625 PF00575 S1 RNA binding domain AM462_05630 PF02224 Cytidylate kinase AM462_05640 PF14437 MafB19-like deaminase AM462_05650 PF03167 Uracil DNA glycosylase superfamily AM462_05660 PF03934 Type II secretion system (T2SS), protein K AM462_05665 PF11612 Type II secretion system (T2SS), protein J AM462_05665 PF07963 Prokaryotic N-terminal methylation motif AM462_05670 PF07963 Prokaryotic N-terminal methylation motif AM462_05670 PF02501 Type II secretion system (T2SS), protein I AM462_05685 PF01026 TatD related DNase AM462_05695 PF09115 DNA polymerase III, delta subunit, C terminal AM462_05700 PF02348 Cytidylyltransferase AM462_05705 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM462_05710 PF00005 ABC transporter AM462_05710 PF00664 ABC transporter transmembrane region AM462_05720 PF01618 MotA/TolQ/ExbB proton channel family AM462_05725 PF02195 ParB-like nuclease domain AM462_05725 PF17762 HTH domain found in ParB protein AM462_05730 PF13614 AAA domain AM462_05735 PF02527 rRNA small subunit methyltransferase G AM462_05740 PF00483 Nucleotidyl transferase AM462_05745 PF01636 Phosphotransferase enzyme family AM462_05750 PF03968 OstA-like protein AM462_05750 PF04453 LPS transport system D AM462_05755 PF00639 PPIC-type PPIASE domain AM462_05755 PF09312 SurA N-terminal domain AM462_05760 PF01116 Fructose-bisphosphate aldolase class-II AM462_05770 PF00162 Phosphoglycerate kinase AM462_05780 PF02545 Maf-like protein AM462_05785 PF08007 Cupin superfamily protein AM462_05800 PF00375 Sodium:dicarboxylate symporter family AM462_05805 PF06912 Protein of unknown function (DUF1275) AM462_05810 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM462_05815 PF00664 ABC transporter transmembrane region AM462_05815 PF00005 ABC transporter AM462_05825 PF12833 Helix-turn-helix domain AM462_05825 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM462_05830 PF01597 Glycine cleavage H-protein AM462_05835 PF02146 Sir2 family AM462_05840 PF00474 Sodium:solute symporter family AM462_05845 PF01037 Lrp/AsnC ligand binding domain AM462_05850 PF00171 Aldehyde dehydrogenase family AM462_05850 PF01619 Proline dehydrogenase AM462_05850 PF14850 DNA-binding domain of Proline dehydrogenase AM462_05850 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM462_05855 PF04229 GrpB protein AM462_05860 PF05958 tRNA (Uracil-5-)-methyltransferase AM462_05870 PF09992 Phosphodiester glycosidase AM462_05880 PF04264 YceI-like domain AM462_05890 PF00456 Transketolase, thiamine diphosphate binding domain AM462_05890 PF02780 Transketolase, C-terminal domain AM462_05890 PF02779 Transketolase, pyrimidine binding domain AM462_05895 PF02772 S-adenosylmethionine synthetase, central domain AM462_05895 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM462_05895 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM462_05915 PF00905 Penicillin binding protein transpeptidase domain AM462_05930 PF02075 Crossover junction endodeoxyribonuclease RuvC AM462_05935 PF03853 YjeF-related protein N-terminus AM462_05935 PF01256 Carbohydrate kinase AM462_05940 PF08331 Domain of unknown function (DUF1730) AM462_05945 PF06968 Biotin and Thiamin Synthesis associated domain AM462_05945 PF04055 Radical SAM superfamily AM462_05960 PF16970 Type-1 fimbrial protein, A AM462_05965 PF02753 Pili assembly chaperone PapD, C-terminal domain AM462_05965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM462_05970 PF13953 PapC C-terminal domain AM462_05970 PF00577 Outer membrane usher protein AM462_05970 PF13954 PapC N-terminal domain AM462_05995 PF00892 EamA-like transporter family AM462_06005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM462_06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06015 PF03466 LysR substrate binding domain AM462_06035 PF00440 Bacterial regulatory proteins, tetR family AM462_06045 PF01709 Transcriptional regulator AM462_06050 PF01037 Lrp/AsnC ligand binding domain AM462_06060 PF00005 ABC transporter AM462_06065 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06070 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06085 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM462_06085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_06095 PF00296 Luciferase-like monooxygenase AM462_06100 PF03180 NLPA lipoprotein AM462_06105 PF03180 NLPA lipoprotein AM462_06110 PF09383 NIL domain AM462_06110 PF00005 ABC transporter AM462_06115 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06120 PF01926 50S ribosome-binding GTPase AM462_06120 PF06071 Protein of unknown function (DUF933) AM462_06145 PF03591 AzlC protein AM462_06150 PF05437 Branched-chain amino acid transport protein (AzlD) AM462_06160 PF02222 ATP-grasp domain AM462_06165 PF08335 GlnD PII-uridylyltransferase AM462_06165 PF01966 HD domain AM462_06165 PF01909 Nucleotidyltransferase domain AM462_06170 PF00155 Aminotransferase class I and II AM462_06180 PF12833 Helix-turn-helix domain AM462_06180 PF12852 Cupin AM462_06185 PF00255 Glutathione peroxidase AM462_06190 PF01641 SelR domain AM462_06195 PF00155 Aminotransferase class I and II AM462_06200 PF00375 Sodium:dicarboxylate symporter family AM462_06205 PF17763 Glutaminase/Asparaginase C-terminal domain AM462_06205 PF00710 Asparaginase, N-terminal AM462_06210 PF02811 PHP domain AM462_06210 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM462_06210 PF01336 OB-fold nucleic acid binding domain AM462_06210 PF14579 Helix-hairpin-helix motif AM462_06210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM462_06215 PF00588 SpoU rRNA Methylase family AM462_06220 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_06235 PF13192 Thioredoxin domain AM462_06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_06250 PF03466 LysR substrate binding domain AM462_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06255 PF01758 Sodium Bile acid symporter family AM462_06260 PF01022 Bacterial regulatory protein, arsR family AM462_06265 PF03960 ArsC family AM462_06275 PF13382 Adenine deaminase C-terminal domain AM462_06275 PF01979 Amidohydrolase family AM462_06285 PF03466 LysR substrate binding domain AM462_06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06295 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM462_06300 PF01177 Asp/Glu/Hydantoin racemase AM462_06305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM462_06310 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06315 PF00005 ABC transporter AM462_06320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM462_06330 PF00083 Sugar (and other) transporter AM462_06335 PF00296 Luciferase-like monooxygenase AM462_06355 PF01654 Cytochrome bd terminal oxidase subunit I AM462_06360 PF02322 Cytochrome bd terminal oxidase subunit II AM462_06370 PF00155 Aminotransferase class I and II AM462_06370 PF00392 Bacterial regulatory proteins, gntR family AM462_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06375 PF03466 LysR substrate binding domain AM462_06390 PF00698 Acyl transferase domain AM462_06395 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM462_06405 PF01039 Carboxyl transferase domain AM462_06410 PF06857 Malonate decarboxylase delta subunit (MdcD) AM462_06415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM462_06420 PF16957 Malonate decarboxylase, alpha subunit, transporter AM462_06425 PF07690 Major Facilitator Superfamily AM462_06440 PF00392 Bacterial regulatory proteins, gntR family AM462_06445 PF04172 LrgB-like family AM462_06450 PF03788 LrgA family AM462_06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06455 PF03466 LysR substrate binding domain AM462_06460 PF02798 Glutathione S-transferase, N-terminal domain AM462_06460 PF14834 Glutathione S-transferase, C-terminal domain AM462_06465 PF02798 Glutathione S-transferase, N-terminal domain AM462_06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06470 PF03466 LysR substrate binding domain AM462_06480 PF00581 Rhodanese-like domain AM462_06485 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_06495 PF00266 Aminotransferase class-V AM462_06500 PF01810 LysE type translocator AM462_06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06505 PF03466 LysR substrate binding domain AM462_06510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM462_06515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM462_06520 PF00005 ABC transporter AM462_06525 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06530 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06545 PF00072 Response regulator receiver domain AM462_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_06550 PF09308 LuxQ, periplasmic AM462_06550 PF00512 His Kinase A (phospho-acceptor) domain AM462_06550 PF00072 Response regulator receiver domain AM462_06560 PF13404 AsnC-type helix-turn-helix domain AM462_06560 PF01037 Lrp/AsnC ligand binding domain AM462_06570 PF00717 Peptidase S24-like AM462_06595 PF00199 Catalase AM462_06595 PF06628 Catalase-related immune-responsive AM462_06595 PF18011 C-terminal domain found in long catalases AM462_06605 PF00994 Probable molybdopterin binding domain AM462_06605 PF02464 Competence-damaged protein AM462_06605 PF18146 Damage-inducible protein CinA KH domain AM462_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06635 PF03466 LysR substrate binding domain AM462_06655 PF00501 AMP-binding enzyme AM462_06655 PF13193 AMP-binding enzyme C-terminal domain AM462_06660 PF00440 Bacterial regulatory proteins, tetR family AM462_06665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_06665 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_06665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_06670 PF01039 Carboxyl transferase domain AM462_06675 PF00378 Enoyl-CoA hydratase/isomerase AM462_06680 PF00364 Biotin-requiring enzyme AM462_06680 PF02785 Biotin carboxylase C-terminal domain AM462_06680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_06680 PF00289 Biotin carboxylase, N-terminal domain AM462_06685 PF00682 HMGL-like AM462_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06690 PF03466 LysR substrate binding domain AM462_06705 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_06705 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM462_06705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_06705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_06715 PF07690 Major Facilitator Superfamily AM462_06725 PF01144 Coenzyme A transferase AM462_06730 PF01144 Coenzyme A transferase AM462_06735 PF07690 Major Facilitator Superfamily AM462_06740 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_06740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_06740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_06745 PF00378 Enoyl-CoA hydratase/isomerase AM462_06755 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM462_06755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM462_06755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM462_06760 PF00108 Thiolase, N-terminal domain AM462_06760 PF02803 Thiolase, C-terminal domain AM462_06765 PF09339 IclR helix-turn-helix domain AM462_06770 PF07690 Major Facilitator Superfamily AM462_06775 PF03060 Nitronate monooxygenase AM462_06780 PF00378 Enoyl-CoA hydratase/isomerase AM462_06785 PF09339 IclR helix-turn-helix domain AM462_06790 PF02515 CoA-transferase family III AM462_06795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_06795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_06795 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_06800 PF07690 Major Facilitator Superfamily AM462_06805 PF13419 Haloacid dehalogenase-like hydrolase AM462_06810 PF00266 Aminotransferase class-V AM462_06815 PF01266 FAD dependent oxidoreductase AM462_06820 PF00528 Binding-protein-dependent transport system inner membrane component AM462_06825 PF00005 ABC transporter AM462_06825 PF08402 TOBE domain AM462_06835 PF00392 Bacterial regulatory proteins, gntR family AM462_06835 PF07702 UTRA domain AM462_06840 PF01494 FAD binding domain AM462_06845 PF09339 IclR helix-turn-helix domain AM462_06845 PF01614 Bacterial transcriptional regulator AM462_06850 PF02525 Flavodoxin-like fold AM462_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_06855 PF03466 LysR substrate binding domain AM462_06860 PF02627 Carboxymuconolactone decarboxylase family AM462_06865 PF00171 Aldehyde dehydrogenase family AM462_06875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM462_06885 PF00171 Aldehyde dehydrogenase family AM462_06890 PF00296 Luciferase-like monooxygenase AM462_06895 PF01613 Flavin reductase like domain AM462_06900 PF12697 Alpha/beta hydrolase family AM462_06920 PF01292 Prokaryotic cytochrome b561 AM462_06925 PF00199 Catalase AM462_06930 PF07690 Major Facilitator Superfamily AM462_06935 PF00682 HMGL-like AM462_06940 PF02515 CoA-transferase family III AM462_06970 PF00313 'Cold-shock' DNA-binding domain AM462_07010 PF13361 UvrD-like helicase C-terminal domain AM462_07010 PF00580 UvrD/REP helicase N-terminal domain AM462_07015 PF02463 RecF/RecN/SMC N terminal domain AM462_07020 PF03061 Thioesterase superfamily AM462_07025 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_07030 PF07848 PaaX-like protein AM462_07030 PF08223 PaaX-like protein C-terminal domain AM462_07035 PF14535 AMP-binding enzyme C-terminal domain AM462_07035 PF00501 AMP-binding enzyme AM462_07040 PF02803 Thiolase, C-terminal domain AM462_07040 PF00108 Thiolase, N-terminal domain AM462_07045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM462_07045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM462_07045 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM462_07050 PF00378 Enoyl-CoA hydratase/isomerase AM462_07055 PF00378 Enoyl-CoA hydratase/isomerase AM462_07060 PF00970 Oxidoreductase FAD-binding domain AM462_07060 PF00175 Oxidoreductase NAD-binding domain AM462_07060 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_07065 PF01883 Iron-sulfur cluster assembly protein AM462_07070 PF05138 Phenylacetic acid catabolic protein AM462_07075 PF06243 Phenylacetic acid degradation B AM462_07080 PF05138 Phenylacetic acid catabolic protein AM462_07085 PF01575 MaoC like domain AM462_07085 PF00171 Aldehyde dehydrogenase family AM462_07090 PF03315 Serine dehydratase beta chain AM462_07090 PF03313 Serine dehydratase alpha chain AM462_07095 PF13520 Amino acid permease AM462_07100 PF00171 Aldehyde dehydrogenase family AM462_07105 PF00083 Sugar (and other) transporter AM462_07115 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_07115 PF04324 BFD-like [2Fe-2S] binding domain AM462_07125 PF01266 FAD dependent oxidoreductase AM462_07130 PF05544 Proline racemase AM462_07135 PF00392 Bacterial regulatory proteins, gntR family AM462_07145 PF00701 Dihydrodipicolinate synthetase family AM462_07160 PF00376 MerR family regulatory protein AM462_07160 PF09278 MerR, DNA binding AM462_07170 PF02677 Epoxyqueuosine reductase QueH AM462_07185 PF07690 Major Facilitator Superfamily AM462_07190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM462_07200 PF03466 LysR substrate binding domain AM462_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_07230 PF07724 AAA domain (Cdc48 subfamily) AM462_07230 PF00004 ATPase family associated with various cellular activities (AAA) AM462_07230 PF17871 AAA lid domain AM462_07230 PF10431 C-terminal, D2-small domain, of ClpB protein AM462_07240 PF01389 OmpA-like transmembrane domain AM462_07240 PF00691 OmpA family AM462_07320 PF00005 ABC transporter AM462_07325 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM462_07330 PF01425 Amidase AM462_07335 PF01402 Ribbon-helix-helix protein, copG family AM462_07335 PF08753 NikR C terminal nickel binding domain AM462_07345 PF01638 HxlR-like helix-turn-helix AM462_07350 PF02525 Flavodoxin-like fold AM462_07355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_07355 PF00289 Biotin carboxylase, N-terminal domain AM462_07355 PF02785 Biotin carboxylase C-terminal domain AM462_07370 PF00107 Zinc-binding dehydrogenase AM462_07370 PF08240 Alcohol dehydrogenase GroES-like domain AM462_07370 PF13823 Alcohol dehydrogenase GroES-associated AM462_07380 PF00440 Bacterial regulatory proteins, tetR family AM462_07410 PF00654 Voltage gated chloride channel AM462_07415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_07415 PF00364 Biotin-requiring enzyme AM462_07415 PF00289 Biotin carboxylase, N-terminal domain AM462_07415 PF02785 Biotin carboxylase C-terminal domain AM462_07425 PF07286 Protein of unknown function (DUF1445) AM462_07430 PF03746 LamB/YcsF family AM462_07435 PF01566 Natural resistance-associated macrophage protein AM462_07440 PF03466 LysR substrate binding domain AM462_07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_07465 PF05593 RHS Repeat AM462_07465 PF03527 RHS protein AM462_07480 PF05593 RHS Repeat AM462_07480 PF14220 Domain of unknown function (DUF4329) AM462_07480 PF03527 RHS protein AM462_07485 PF04717 Type VI secretion system, phage-baseplate injector AM462_07485 PF16671 Actin cross-linking domain AM462_07515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM462_07515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM462_07530 PF13936 Helix-turn-helix domain AM462_07530 PF00665 Integrase core domain AM462_07540 PF07690 Major Facilitator Superfamily AM462_07555 PF03279 Bacterial lipid A biosynthesis acyltransferase AM462_07565 PF00892 EamA-like transporter family AM462_07570 PF01037 Lrp/AsnC ligand binding domain AM462_07575 PF00488 MutS domain V AM462_07575 PF01624 MutS domain I AM462_07575 PF05188 MutS domain II AM462_07575 PF05192 MutS domain III AM462_07575 PF05190 MutS family domain IV AM462_07585 PF11953 Domain of unknown function (DUF3470) AM462_07585 PF00037 4Fe-4S binding domain AM462_07595 PF01596 O-methyltransferase AM462_07605 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_07610 PF01205 Uncharacterized protein family UPF0029 AM462_07620 PF00664 ABC transporter transmembrane region AM462_07620 PF00005 ABC transporter AM462_07620 PF03412 Peptidase C39 family AM462_07625 PF02321 Outer membrane efflux protein AM462_07630 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM462_07630 PF00005 ABC transporter AM462_07635 PF03968 OstA-like protein AM462_07650 PF01380 SIS domain AM462_07650 PF00571 CBS domain AM462_07655 PF09190 DALR domain AM462_07655 PF01406 tRNA synthetases class I (C) catalytic domain AM462_07700 PF13229 Right handed beta helix region AM462_07700 PF12708 Pectate lyase superfamily protein AM462_07720 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) AM462_07740 PF06381 Protein of unknown function (DUF1073) AM462_07815 PF01638 HxlR-like helix-turn-helix AM462_07820 PF07690 Major Facilitator Superfamily AM462_07850 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM462_07850 PF03807 NADP oxidoreductase coenzyme F420-dependent AM462_07860 PF00313 'Cold-shock' DNA-binding domain AM462_07865 PF01810 LysE type translocator AM462_07900 PF13742 OB-fold nucleic acid binding domain AM462_07900 PF02601 Exonuclease VII, large subunit AM462_07940 PF00376 MerR family regulatory protein AM462_07940 PF09278 MerR, DNA binding AM462_07945 PF00403 Heavy-metal-associated domain AM462_07955 PF03466 LysR substrate binding domain AM462_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_07960 PF00355 Rieske [2Fe-2S] domain AM462_07960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM462_07965 PF00866 Ring hydroxylating beta subunit AM462_07970 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_07970 PF00970 Oxidoreductase FAD-binding domain AM462_07970 PF00175 Oxidoreductase NAD-binding domain AM462_07975 PF00106 short chain dehydrogenase AM462_07980 PF03594 Benzoate membrane transport protein AM462_07985 PF07690 Major Facilitator Superfamily AM462_07995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM462_07995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM462_08000 PF11898 Domain of unknown function (DUF3418) AM462_08000 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM462_08000 PF00271 Helicase conserved C-terminal domain AM462_08000 PF00270 DEAD/DEAH box helicase AM462_08000 PF04408 Helicase associated domain (HA2) AM462_08005 PF00578 AhpC/TSA family AM462_08005 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM462_08025 PF13192 Thioredoxin domain AM462_08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_08035 PF02798 Glutathione S-transferase, N-terminal domain AM462_08035 PF00043 Glutathione S-transferase, C-terminal domain AM462_08045 PF02390 Putative methyltransferase AM462_08050 PF13417 Glutathione S-transferase, N-terminal domain AM462_08050 PF00043 Glutathione S-transferase, C-terminal domain AM462_08060 PF00691 OmpA family AM462_08060 PF13488 Glycine zipper AM462_08065 PF01979 Amidohydrolase family AM462_08070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM462_08070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM462_08080 PF02926 THUMP domain AM462_08080 PF01170 Putative RNA methylase family UPF0020 AM462_08080 PF10672 S-adenosylmethionine-dependent methyltransferase AM462_08095 PF00004 ATPase family associated with various cellular activities (AAA) AM462_08095 PF07724 AAA domain (Cdc48 subfamily) AM462_08095 PF17871 AAA lid domain AM462_08095 PF02861 Clp amino terminal domain, pathogenicity island component AM462_08095 PF10431 C-terminal, D2-small domain, of ClpB protein AM462_08110 PF02566 OsmC-like protein AM462_08115 PF13545 Crp-like helix-turn-helix domain AM462_08115 PF00027 Cyclic nucleotide-binding domain AM462_08120 PF00248 Aldo/keto reductase family AM462_08135 PF00709 Adenylosuccinate synthetase AM462_08140 PF13393 Histidyl-tRNA synthetase AM462_08145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM462_08145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM462_08150 PF02272 DHHA1 domain AM462_08150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM462_08150 PF01411 tRNA synthetases class II (A) AM462_08155 PF00696 Amino acid kinase family AM462_08155 PF13840 ACT domain AM462_08155 PF01842 ACT domain AM462_08160 PF02599 Global regulator protein family AM462_08165 PF01351 Ribonuclease HII AM462_08175 PF01292 Prokaryotic cytochrome b561 AM462_08180 PF00962 Adenosine/AMP deaminase AM462_08185 PF00860 Permease family AM462_08195 PF00743 Flavin-binding monooxygenase-like AM462_08200 PF00106 short chain dehydrogenase AM462_08200 PF00561 alpha/beta hydrolase fold AM462_08210 PF02678 Pirin AM462_08210 PF17954 Quercetinase C-terminal cupin domain AM462_08225 PF00440 Bacterial regulatory proteins, tetR family AM462_08225 PF17932 Tetracyclin repressor-like, C-terminal domain AM462_08235 PF00106 short chain dehydrogenase AM462_08240 PF00743 Flavin-binding monooxygenase-like AM462_08245 PF04072 Leucine carboxyl methyltransferase AM462_08250 PF12833 Helix-turn-helix domain AM462_08250 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM462_08255 PF00743 Flavin-binding monooxygenase-like AM462_08260 PF00106 short chain dehydrogenase AM462_08265 PF07859 alpha/beta hydrolase fold AM462_08270 PF05199 GMC oxidoreductase AM462_08275 PF03573 outer membrane porin, OprD family AM462_08280 PF07690 Major Facilitator Superfamily AM462_08285 PF00355 Rieske [2Fe-2S] domain AM462_08290 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_08290 PF00175 Oxidoreductase NAD-binding domain AM462_08305 PF07690 Major Facilitator Superfamily AM462_08310 PF00378 Enoyl-CoA hydratase/isomerase AM462_08315 PF00171 Aldehyde dehydrogenase family AM462_08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_08325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_08325 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_08330 PF03573 outer membrane porin, OprD family AM462_08345 PF07519 Tannase and feruloyl esterase AM462_08350 PF07729 FCD domain AM462_08350 PF00392 Bacterial regulatory proteins, gntR family AM462_08355 PF00171 Aldehyde dehydrogenase family AM462_08360 PF00701 Dihydrodipicolinate synthetase family AM462_08365 PF13378 Enolase C-terminal domain-like AM462_08370 PF07690 Major Facilitator Superfamily AM462_08375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM462_08375 PF08666 SAF domain AM462_08380 PF00892 EamA-like transporter family AM462_08385 PF12833 Helix-turn-helix domain AM462_08385 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM462_08390 PF00171 Aldehyde dehydrogenase family AM462_08410 PF00324 Amino acid permease AM462_08415 PF04958 Arginine N-succinyltransferase beta subunit AM462_08420 PF00202 Aminotransferase class-III AM462_08430 PF00171 Aldehyde dehydrogenase family AM462_08440 PF07729 FCD domain AM462_08440 PF00392 Bacterial regulatory proteins, gntR family AM462_08455 PF01266 FAD dependent oxidoreductase AM462_08460 PF00324 Amino acid permease AM462_08500 PF05593 RHS Repeat AM462_08500 PF03527 RHS protein AM462_08525 PF03180 NLPA lipoprotein AM462_08540 PF00176 SNF2 family N-terminal domain AM462_08540 PF12419 SNF2 Helicase protein AM462_08540 PF00271 Helicase conserved C-terminal domain AM462_08575 PF01420 Type I restriction modification DNA specificity domain AM462_08580 PF02384 N-6 DNA Methylase AM462_08590 PF02661 Fic/DOC family AM462_08615 PF05656 Protein of unknown function (DUF805) AM462_08685 PF00589 Phage integrase family AM462_08685 PF13356 Arm DNA-binding domain AM462_08695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_08695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_08700 PF00764 Arginosuccinate synthase AM462_08705 PF00563 EAL domain AM462_08705 PF01590 GAF domain AM462_08705 PF00990 Diguanylate cyclase, GGDEF domain AM462_08705 PF00360 Phytochrome region AM462_08710 PF01979 Amidohydrolase family AM462_08715 PF00929 Exonuclease AM462_08725 PF00593 TonB dependent receptor AM462_08725 PF07715 TonB-dependent Receptor Plug Domain AM462_08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_08765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_08770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM462_08770 PF00005 ABC transporter AM462_08775 PF00528 Binding-protein-dependent transport system inner membrane component AM462_08775 PF12911 N-terminal TM domain of oligopeptide transport permease C AM462_08780 PF00528 Binding-protein-dependent transport system inner membrane component AM462_08785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM462_08790 PF01476 LysM domain AM462_08790 PF01464 Transglycosylase SLT domain AM462_08790 PF01476 LysM domain AM462_08790 PF01464 Transglycosylase SLT domain AM462_08795 PF00929 Exonuclease AM462_08805 PF00293 NUDIX domain AM462_08805 PF09297 NADH pyrophosphatase zinc ribbon domain AM462_08815 PF04972 BON domain AM462_08820 PF02021 Uncharacterised protein family UPF0102 AM462_08825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM462_08835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_08835 PF03466 LysR substrate binding domain AM462_08840 PF01810 LysE type translocator AM462_08850 PF13411 MerR HTH family regulatory protein AM462_08860 PF01494 FAD binding domain AM462_08865 PF01494 FAD binding domain AM462_08870 PF05195 Aminopeptidase P, N-terminal domain AM462_08870 PF00557 Metallopeptidase family M24 AM462_08910 PF00313 'Cold-shock' DNA-binding domain AM462_08965 PF01476 LysM domain AM462_08965 PF08525 Opacity-associated protein A N-terminal motif AM462_08965 PF01551 Peptidase family M23 AM462_08980 PF08346 AntA/AntB antirepressor AM462_08980 PF10548 P22AR C-terminal domain AM462_09195 PF01381 Helix-turn-helix AM462_09275 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM462_09285 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM462_09285 PF05362 Lon protease (S16) C-terminal proteolytic domain AM462_09285 PF00004 ATPase family associated with various cellular activities (AAA) AM462_09290 PF02590 Predicted SPOUT methyltransferase AM462_09295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM462_09305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM462_09305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM462_09310 PF04060 Putative Fe-S cluster AM462_09315 PF10576 Iron-sulfur binding domain of endonuclease III AM462_09315 PF00633 Helix-hairpin-helix motif AM462_09315 PF00730 HhH-GPD superfamily base excision DNA repair protein AM462_09325 PF05191 Adenylate kinase, active site lid AM462_09340 PF03717 Penicillin-binding Protein dimerisation domain AM462_09340 PF00905 Penicillin binding protein transpeptidase domain AM462_09355 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM462_09360 PF01730 UreF AM462_09365 PF05194 UreE urease accessory protein, C-terminal domain AM462_09365 PF02814 UreE urease accessory protein, N-terminal domain AM462_09370 PF01979 Amidohydrolase family AM462_09370 PF00449 Urease alpha-subunit, N-terminal domain AM462_09375 PF00699 Urease beta subunit AM462_09380 PF00547 Urease, gamma subunit AM462_09385 PF01774 UreD urease accessory protein AM462_09400 PF00463 Isocitrate lyase family AM462_09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_09405 PF03466 LysR substrate binding domain AM462_09410 PF00571 CBS domain AM462_09410 PF03471 Transporter associated domain AM462_09410 PF01595 Cyclin M transmembrane N-terminal domain AM462_09420 PF03600 Citrate transporter AM462_09435 PF00009 Elongation factor Tu GTP binding domain AM462_09440 PF01507 Phosphoadenosine phosphosulfate reductase family AM462_09450 PF14052 Capsule assembly protein Wzi AM462_09455 PF00152 tRNA synthetases class II (D, K and N) AM462_09455 PF01336 OB-fold nucleic acid binding domain AM462_09495 PF00905 Penicillin binding protein transpeptidase domain AM462_09505 PF00301 Rubredoxin AM462_09510 PF18113 Rubredoxin binding C-terminal domain AM462_09510 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_09515 PF00561 alpha/beta hydrolase fold AM462_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_09520 PF03466 LysR substrate binding domain AM462_09535 PF13089 Polyphosphate kinase N-terminal domain AM462_09535 PF02503 Polyphosphate kinase middle domain AM462_09535 PF13090 Polyphosphate kinase C-terminal domain 2 AM462_09535 PF17941 Polyphosphate kinase C-terminal domain 1 AM462_09540 PF00912 Transglycosylase AM462_09545 PF01694 Rhomboid family AM462_09555 PF00005 ABC transporter AM462_09560 PF13472 GDSL-like Lipase/Acylhydrolase family AM462_09565 PF00484 Carbonic anhydrase AM462_09570 PF00561 alpha/beta hydrolase fold AM462_09580 PF07715 TonB-dependent Receptor Plug Domain AM462_09580 PF00593 TonB dependent receptor AM462_09585 PF01106 NifU-like domain AM462_09585 PF01521 Iron-sulphur cluster biosynthesis AM462_09595 PF00884 Sulfatase AM462_09600 PF03781 Sulfatase-modifying factor enzyme 1 AM462_09615 PF00291 Pyridoxal-phosphate dependent enzyme AM462_09620 PF01384 Phosphate transporter family AM462_09625 PF02574 Homocysteine S-methyltransferase AM462_09625 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM462_09625 PF02607 B12 binding domain AM462_09625 PF02310 B12 binding domain AM462_09625 PF00809 Pterin binding enzyme AM462_09630 PF02779 Transketolase, pyrimidine binding domain AM462_09630 PF02780 Transketolase, C-terminal domain AM462_09635 PF00456 Transketolase, thiamine diphosphate binding domain AM462_09640 PF07690 Major Facilitator Superfamily AM462_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_09650 PF03466 LysR substrate binding domain AM462_09665 PF01263 Aldose 1-epimerase AM462_09670 PF07690 Major Facilitator Superfamily AM462_09675 PF12833 Helix-turn-helix domain AM462_09675 PF02311 AraC-like ligand binding domain AM462_09680 PF04960 Glutaminase AM462_09685 PF01327 Polypeptide deformylase AM462_09690 PF07690 Major Facilitator Superfamily AM462_09700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM462_09700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM462_09700 PF00205 Thiamine pyrophosphate enzyme, central domain AM462_09705 PF00171 Aldehyde dehydrogenase family AM462_09710 PF01958 Domain of unknown function DUF108 AM462_09710 PF03447 Homoserine dehydrogenase, NAD binding domain AM462_09720 PF12697 Alpha/beta hydrolase family AM462_09730 PF07690 Major Facilitator Superfamily AM462_09735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_09735 PF14759 Reductase C-terminal AM462_09740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM462_09750 PF00355 Rieske [2Fe-2S] domain AM462_09760 PF00355 Rieske [2Fe-2S] domain AM462_09765 PF01614 Bacterial transcriptional regulator AM462_09765 PF09339 IclR helix-turn-helix domain AM462_09780 PF00378 Enoyl-CoA hydratase/isomerase AM462_09790 PF00535 Glycosyl transferase family 2 AM462_09795 PF14883 Hypothetical glycosyl hydrolase family 13 AM462_09795 PF01522 Polysaccharide deacetylase AM462_09800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_09805 PF07152 YaeQ protein AM462_09810 PF00375 Sodium:dicarboxylate symporter family AM462_09815 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM462_09815 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM462_09840 PF00905 Penicillin binding protein transpeptidase domain AM462_09855 PF03061 Thioesterase superfamily AM462_09865 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_09870 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_09875 PF13977 BetI-type transcriptional repressor, C-terminal AM462_09875 PF00440 Bacterial regulatory proteins, tetR family AM462_09880 PF00171 Aldehyde dehydrogenase family AM462_09885 PF05199 GMC oxidoreductase AM462_09885 PF00732 GMC oxidoreductase AM462_09890 PF06039 Malate:quinone oxidoreductase (Mqo) AM462_09900 PF02574 Homocysteine S-methyltransferase AM462_09905 PF13520 Amino acid permease AM462_09930 PF01126 Heme oxygenase AM462_09950 PF00593 TonB dependent receptor AM462_09950 PF07715 TonB-dependent Receptor Plug Domain AM462_09960 PF04542 Sigma-70 region 2 AM462_09960 PF08281 Sigma-70, region 4 AM462_09970 PF00701 Dihydrodipicolinate synthetase family AM462_09975 PF00083 Sugar (and other) transporter AM462_09995 PF01026 TatD related DNase AM462_10010 PF07693 KAP family P-loop domain AM462_10030 PF00905 Penicillin binding protein transpeptidase domain AM462_10055 PF00916 Sulfate permease family AM462_10055 PF01740 STAS domain AM462_10060 PF00582 Universal stress protein family AM462_10090 PF00665 Integrase core domain AM462_10110 PF07690 Major Facilitator Superfamily AM462_10115 PF13533 Biotin-lipoyl like AM462_10120 PF03061 Thioesterase superfamily AM462_10125 PF00490 Delta-aminolevulinic acid dehydratase AM462_10130 PF01266 FAD dependent oxidoreductase AM462_10135 PF08338 Domain of unknown function (DUF1731) AM462_10135 PF01370 NAD dependent epimerase/dehydratase family AM462_10155 PF00149 Calcineurin-like phosphoesterase AM462_10155 PF12320 Type 5 capsule protein repressor C-terminal domain AM462_10165 PF01168 Alanine racemase, N-terminal domain AM462_10170 PF00437 Type II/IV secretion system protein AM462_10175 PF00437 Type II/IV secretion system protein AM462_10180 PF01475 Ferric uptake regulator family AM462_10185 PF04355 SmpA / OmlA family AM462_10190 PF03658 RnfH family Ubiquitin AM462_10205 PF01814 Hemerythrin HHE cation binding domain AM462_10210 PF13230 Glutamine amidotransferases class-II AM462_10220 PF00696 Amino acid kinase family AM462_10225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_10225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_10225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_10225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_10230 PF00692 dUTPase AM462_10235 PF00580 UvrD/REP helicase N-terminal domain AM462_10235 PF13361 UvrD-like helicase C-terminal domain AM462_10240 PF13488 Glycine zipper AM462_10240 PF00691 OmpA family AM462_10245 PF01553 Acyltransferase AM462_10255 PF03775 Septum formation inhibitor MinC, C-terminal domain AM462_10260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM462_10265 PF03776 Septum formation topological specificity factor MinE AM462_10275 PF01810 LysE type translocator AM462_10280 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM462_10280 PF01580 FtsK/SpoIIIE family AM462_10280 PF09397 Ftsk gamma domain AM462_10280 PF17854 FtsK alpha domain AM462_10285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_10290 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM462_10295 PF04377 Arginine-tRNA-protein transferase, C terminus AM462_10295 PF04376 Arginine-tRNA-protein transferase, N terminus AM462_10300 PF00583 Acetyltransferase (GNAT) family AM462_10315 PF03144 Elongation factor Tu domain 2 AM462_10315 PF00009 Elongation factor Tu GTP binding domain AM462_10315 PF03143 Elongation factor Tu C-terminal domain AM462_10320 PF03144 Elongation factor Tu domain 2 AM462_10320 PF00009 Elongation factor Tu GTP binding domain AM462_10320 PF00679 Elongation factor G C-terminus AM462_10320 PF14492 Elongation Factor G, domain II AM462_10320 PF03764 Elongation factor G, domain IV AM462_10325 PF00177 Ribosomal protein S7p/S5e AM462_10330 PF00164 Ribosomal protein S12/S23 AM462_10340 PF00109 Beta-ketoacyl synthase, N-terminal domain AM462_10340 PF02801 Beta-ketoacyl synthase, C-terminal domain AM462_10350 PF05726 Pirin C-terminal cupin domain AM462_10350 PF02678 Pirin AM462_10360 PF00795 Carbon-nitrogen hydrolase AM462_10360 PF02540 NAD synthase AM462_10375 PF00175 Oxidoreductase NAD-binding domain AM462_10375 PF00111 2Fe-2S iron-sulfur cluster binding domain AM462_10375 PF00970 Oxidoreductase FAD-binding domain AM462_10380 PF00171 Aldehyde dehydrogenase family AM462_10385 PF00355 Rieske [2Fe-2S] domain AM462_10385 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM462_10390 PF07859 alpha/beta hydrolase fold AM462_10395 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_10400 PF00180 Isocitrate/isopropylmalate dehydrogenase AM462_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_10405 PF03466 LysR substrate binding domain AM462_10425 PF00037 4Fe-4S binding domain AM462_10430 PF01467 Cytidylyltransferase-like AM462_10435 PF01668 SmpB protein AM462_10440 PF03358 NADPH-dependent FMN reductase AM462_10450 PF01479 S4 domain AM462_10450 PF00849 RNA pseudouridylate synthase AM462_10455 PF13525 Outer membrane lipoprotein AM462_10460 PF08275 DNA primase catalytic core, N-terminal domain AM462_10460 PF01807 CHC2 zinc finger AM462_10460 PF08278 DNA primase DnaG DnaB-binding AM462_10460 PF10410 DnaB-helicase binding domain of primase AM462_10465 PF01488 Shikimate / quinate 5-dehydrogenase AM462_10465 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM462_10465 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM462_10475 PF03550 Outer membrane lipoprotein LolB AM462_10480 PF00288 GHMP kinases N terminal domain AM462_10480 PF08544 GHMP kinases C terminal AM462_10500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM462_10500 PF14572 Phosphoribosyl synthetase-associated domain AM462_10505 PF01386 Ribosomal L25p family AM462_10510 PF01195 Peptidyl-tRNA hydrolase AM462_10515 PF02261 Aspartate decarboxylase AM462_10530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM462_10540 PF08543 Phosphomethylpyrimidine kinase AM462_10540 PF03070 TENA/THI-4/PQQC family AM462_10540 PF02581 Thiamine monophosphate synthase AM462_10545 PF01476 LysM domain AM462_10545 PF04972 BON domain AM462_10550 PF00550 Phosphopantetheine attachment site AM462_10560 PF00698 Acyl transferase domain AM462_10565 PF01783 Ribosomal L32p protein family AM462_10570 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM462_10575 PF04315 Elongation factor P hydroxylase AM462_10580 PF01300 Telomere recombination AM462_10585 PF02616 Segregation and condensation protein ScpA AM462_10590 PF04079 Segregation and condensation complex subunit ScpB AM462_10595 PF00849 RNA pseudouridylate synthase AM462_10595 PF01479 S4 domain AM462_10610 PF00155 Aminotransferase class I and II AM462_10615 PF04055 Radical SAM superfamily AM462_10615 PF06968 Biotin and Thiamin Synthesis associated domain AM462_10615 PF00202 Aminotransferase class-III AM462_10620 PF12697 Alpha/beta hydrolase family AM462_10620 PF08241 Methyltransferase domain AM462_10625 PF02358 Trehalose-phosphatase AM462_10630 PF00982 Glycosyltransferase family 20 AM462_10635 PF07690 Major Facilitator Superfamily AM462_10640 PF00210 Ferritin-like domain AM462_10645 PF01653 NAD-dependent DNA ligase adenylation domain AM462_10645 PF12826 Helix-hairpin-helix motif AM462_10645 PF03120 NAD-dependent DNA ligase OB-fold domain AM462_10645 PF00533 BRCA1 C Terminus (BRCT) domain AM462_10645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM462_10655 PF02463 RecF/RecN/SMC N terminal domain AM462_10655 PF06470 SMC proteins Flexible Hinge Domain AM462_10665 PF01925 Sulfite exporter TauE/SafE AM462_10675 PF03309 Type III pantothenate kinase AM462_10680 PF02978 Signal peptide binding domain AM462_10680 PF00448 SRP54-type protein, GTPase domain AM462_10680 PF02881 SRP54-type protein, helical bundle domain AM462_10690 PF01207 Dihydrouridine synthase (Dus) AM462_10725 PF00692 dUTPase AM462_10740 PF01048 Phosphorylase superfamily AM462_10750 PF10609 NUBPL iron-transfer P-loop NTPase AM462_10760 PF01588 Putative tRNA binding domain AM462_10760 PF09334 tRNA synthetases class I (M) AM462_10785 PF13533 Biotin-lipoyl like AM462_10790 PF00291 Pyridoxal-phosphate dependent enzyme AM462_10805 PF05552 Conserved TM helix AM462_10820 PF00970 Oxidoreductase FAD-binding domain AM462_10820 PF00175 Oxidoreductase NAD-binding domain AM462_10825 PF03466 LysR substrate binding domain AM462_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_10835 PF00313 'Cold-shock' DNA-binding domain AM462_10845 PF00361 Proton-conducting membrane transporter AM462_10850 PF00361 Proton-conducting membrane transporter AM462_10855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM462_10855 PF00361 Proton-conducting membrane transporter AM462_10860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM462_10865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM462_10870 PF12838 4Fe-4S dicluster domain AM462_10875 PF00146 NADH dehydrogenase AM462_10880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM462_10880 PF00384 Molybdopterin oxidoreductase AM462_10880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM462_10885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM462_10885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM462_10885 PF10531 SLBB domain AM462_10895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM462_10895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM462_10900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM462_10905 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM462_10910 PF00990 Diguanylate cyclase, GGDEF domain AM462_10910 PF17151 Periplasmic sensor domain AM462_10920 PF00512 His Kinase A (phospho-acceptor) domain AM462_10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_10920 PF00672 HAMP domain AM462_10925 PF00072 Response regulator receiver domain AM462_10925 PF00486 Transcriptional regulatory protein, C terminal AM462_10935 PF03477 ATP cone domain AM462_10935 PF02867 Ribonucleotide reductase, barrel domain AM462_10935 PF00317 Ribonucleotide reductase, all-alpha domain AM462_10945 PF00268 Ribonucleotide reductase, small chain AM462_10955 PF02567 Phenazine biosynthesis-like protein AM462_10985 PF16295 Tetracyclin repressor-like, C-terminal domain AM462_10985 PF00440 Bacterial regulatory proteins, tetR family AM462_10995 PF01613 Flavin reductase like domain AM462_11000 PF08267 Cobalamin-independent synthase, N-terminal domain AM462_11000 PF01717 Cobalamin-independent synthase, Catalytic domain AM462_11010 PF03466 LysR substrate binding domain AM462_11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_11015 PF01810 LysE type translocator AM462_11025 PF12833 Helix-turn-helix domain AM462_11025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM462_11030 PF01546 Peptidase family M20/M25/M40 AM462_11030 PF07687 Peptidase dimerisation domain AM462_11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_11040 PF03466 LysR substrate binding domain AM462_11050 PF07690 Major Facilitator Superfamily AM462_11060 PF03466 LysR substrate binding domain AM462_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_11065 PF14537 Cytochrome c3 AM462_11065 PF00890 FAD binding domain AM462_11075 PF02515 CoA-transferase family III AM462_11080 PF07690 Major Facilitator Superfamily AM462_11085 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_11085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_11085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_11090 PF03466 LysR substrate binding domain AM462_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_11095 PF08240 Alcohol dehydrogenase GroES-like domain AM462_11095 PF00107 Zinc-binding dehydrogenase AM462_11100 PF00962 Adenosine/AMP deaminase AM462_11130 PF02445 Quinolinate synthetase A protein AM462_11135 PF01960 ArgJ family AM462_11140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM462_11140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM462_11145 PF00893 Small Multidrug Resistance protein AM462_11155 PF05275 Copper resistance protein B precursor (CopB) AM462_11160 PF07731 Multicopper oxidase AM462_11160 PF07732 Multicopper oxidase AM462_11160 PF00394 Multicopper oxidase AM462_11175 PF00834 Ribulose-phosphate 3 epimerase family AM462_11185 PF00756 Putative esterase AM462_11195 PF04445 Putative SAM-dependent methyltransferase AM462_11200 PF00814 Glycoprotease family AM462_11205 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_11210 PF00293 NUDIX domain AM462_11250 PF00425 chorismate binding enzyme AM462_11250 PF04715 Anthranilate synthase component I, N terminal region AM462_11255 PF00155 Aminotransferase class I and II AM462_11260 PF00815 Histidinol dehydrogenase AM462_11265 PF01634 ATP phosphoribosyltransferase AM462_11270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM462_11275 PF01722 BolA-like protein AM462_11280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM462_11285 PF04963 Sigma-54 factor, core binding domain AM462_11285 PF04552 Sigma-54, DNA binding domain AM462_11285 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM462_11330 PF00795 Carbon-nitrogen hydrolase AM462_11340 PF01047 MarR family AM462_11345 PF02566 OsmC-like protein AM462_11350 PF00437 Type II/IV secretion system protein AM462_11370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM462_11370 PF01367 5'-3' exonuclease, C-terminal SAM fold AM462_11370 PF00476 DNA polymerase family A AM462_11370 PF01612 3'-5' exonuclease AM462_11375 PF02325 YGGT family AM462_11380 PF03807 NADP oxidoreductase coenzyme F420-dependent AM462_11380 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM462_11385 PF01171 PP-loop family AM462_11385 PF09179 TilS substrate binding domain AM462_11385 PF11734 TilS substrate C-terminal domain AM462_11390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM462_11395 PF02541 Ppx/GppA phosphatase family AM462_11400 PF00085 Thioredoxin AM462_11405 PF07497 Rho termination factor, RNA-binding domain AM462_11405 PF07498 Rho termination factor, N-terminal domain AM462_11405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM462_11420 PF00216 Bacterial DNA-binding protein AM462_11425 PF03484 tRNA synthetase B5 domain AM462_11425 PF03483 B3/4 domain AM462_11425 PF03147 Ferredoxin-fold anticodon binding domain AM462_11425 PF01588 Putative tRNA binding domain AM462_11425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM462_11430 PF01409 tRNA synthetases class II core domain (F) AM462_11430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM462_11445 PF00453 Ribosomal protein L20 AM462_11450 PF01632 Ribosomal protein L35 AM462_11455 PF07690 Major Facilitator Superfamily AM462_11460 PF09335 SNARE associated Golgi protein AM462_11465 PF02798 Glutathione S-transferase, N-terminal domain AM462_11465 PF00043 Glutathione S-transferase, C-terminal domain AM462_11470 PF00707 Translation initiation factor IF-3, C-terminal domain AM462_11470 PF05198 Translation initiation factor IF-3, N-terminal domain AM462_11475 PF02824 TGS domain AM462_11475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM462_11475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM462_11475 PF03129 Anticodon binding domain AM462_11480 PF13193 AMP-binding enzyme C-terminal domain AM462_11480 PF00501 AMP-binding enzyme AM462_11485 PF04751 Protein of unknown function (DUF615) AM462_11490 PF00381 PTS HPr component phosphorylation site AM462_11495 PF03668 P-loop ATPase protein family AM462_11500 PF02569 Pantoate-beta-alanine ligase AM462_11505 PF02548 Ketopantoate hydroxymethyltransferase AM462_11510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM462_11515 PF01743 Poly A polymerase head domain AM462_11515 PF12627 Probable RNA and SrmB- binding site of polymerase A AM462_11515 PF12626 Polymerase A arginine-rich C-terminus AM462_11525 PF03819 MazG nucleotide pyrophosphohydrolase domain AM462_11535 PF02824 TGS domain AM462_11535 PF13291 ACT domain AM462_11535 PF04607 Region found in RelA / SpoT proteins AM462_11540 PF05958 tRNA (Uracil-5-)-methyltransferase AM462_11550 PF00291 Pyridoxal-phosphate dependent enzyme AM462_11555 PF00672 HAMP domain AM462_11555 PF00512 His Kinase A (phospho-acceptor) domain AM462_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_11555 PF00072 Response regulator receiver domain AM462_11555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM462_11555 PF01627 Hpt domain AM462_11560 PF00378 Enoyl-CoA hydratase/isomerase AM462_11565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM462_11565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM462_11570 PF01261 Xylose isomerase-like TIM barrel AM462_11580 PF00106 short chain dehydrogenase AM462_11585 PF02233 NAD(P) transhydrogenase beta subunit AM462_11590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM462_11595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM462_11595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM462_11600 PF00892 EamA-like transporter family AM462_11610 PF07690 Major Facilitator Superfamily AM462_11630 PF00394 Multicopper oxidase AM462_11630 PF07731 Multicopper oxidase AM462_11630 PF07732 Multicopper oxidase AM462_11640 PF00072 Response regulator receiver domain AM462_11640 PF00486 Transcriptional regulatory protein, C terminal AM462_11645 PF00512 His Kinase A (phospho-acceptor) domain AM462_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_11645 PF00672 HAMP domain AM462_11650 PF04945 YHS domain AM462_11730 PF00589 Phage integrase family AM462_11735 PF01207 Dihydrouridine synthase (Dus) AM462_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_11745 PF03466 LysR substrate binding domain AM462_11755 PF00899 ThiF family AM462_11760 PF00694 Aconitase C-terminal domain AM462_11760 PF00330 Aconitase family (aconitate hydratase) AM462_11765 PF01026 TatD related DNase AM462_11780 PF16658 Class II release factor RF3, C-terminal domain AM462_11780 PF03144 Elongation factor Tu domain 2 AM462_11780 PF00009 Elongation factor Tu GTP binding domain AM462_11790 PF00665 Integrase core domain AM462_11790 PF13936 Helix-turn-helix domain AM462_11815 PF00563 EAL domain AM462_11815 PF00990 Diguanylate cyclase, GGDEF domain AM462_11815 PF03707 Bacterial signalling protein N terminal repeat AM462_11820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM462_11820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM462_11825 PF10369 Small subunit of acetolactate synthase AM462_11830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM462_11830 PF00205 Thiamine pyrophosphate enzyme, central domain AM462_11830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM462_11840 PF08264 Anticodon-binding domain of tRNA AM462_11840 PF09334 tRNA synthetases class I (M) AM462_11840 PF13603 Leucyl-tRNA synthetase, Domain 2 AM462_11840 PF00133 tRNA synthetases class I (I, L, M and V) AM462_11855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_11860 PF02687 FtsX-like permease family AM462_11860 PF12704 MacB-like periplasmic core domain AM462_11860 PF00005 ABC transporter AM462_11865 PF02321 Outer membrane efflux protein AM462_11880 PF00929 Exonuclease AM462_11885 PF03193 RsgA GTPase AM462_11895 PF00462 Glutaredoxin AM462_11900 PF02556 Preprotein translocase subunit SecB AM462_11910 PF01926 50S ribosome-binding GTPase AM462_11910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM462_11915 PF13360 PQQ-like domain AM462_11925 PF03129 Anticodon binding domain AM462_11925 PF13393 Histidyl-tRNA synthetase AM462_11930 PF04551 GcpE protein AM462_11935 PF13464 Domain of unknown function (DUF4115) AM462_11945 PF04055 Radical SAM superfamily AM462_11950 PF00334 Nucleoside diphosphate kinase AM462_11955 PF04384 Iron-sulphur cluster assembly AM462_11960 PF01569 PAP2 superfamily AM462_11965 PF00534 Glycosyl transferases group 1 AM462_11965 PF13439 Glycosyltransferase Family 4 AM462_11970 PF17804 Tail specific protease N-terminal domain AM462_11970 PF11818 C-terminal domain of tail specific protease (DUF3340) AM462_11970 PF00595 PDZ domain AM462_11970 PF03572 Peptidase family S41 AM462_11975 PF00933 Glycosyl hydrolase family 3 N terminal domain AM462_11985 PF00561 alpha/beta hydrolase fold AM462_11990 PF00171 Aldehyde dehydrogenase family AM462_11995 PF00171 Aldehyde dehydrogenase family AM462_12000 PF01202 Shikimate kinase AM462_12005 PF02447 GntP family permease AM462_12010 PF01081 KDPG and KHG aldolase AM462_12015 PF00920 Dehydratase family AM462_12020 PF00871 Acetokinase family AM462_12025 PF07085 DRTGG domain AM462_12025 PF01515 Phosphate acetyl/butaryl transferase AM462_12030 PF05681 Fumarate hydratase (Fumerase) AM462_12030 PF05683 Fumarase C-terminus AM462_12045 PF10431 C-terminal, D2-small domain, of ClpB protein AM462_12045 PF07724 AAA domain (Cdc48 subfamily) AM462_12045 PF06689 ClpX C4-type zinc finger AM462_12050 PF00574 Clp protease AM462_12055 PF05697 Bacterial trigger factor protein (TF) AM462_12055 PF05698 Bacterial trigger factor protein (TF) C-terminus AM462_12055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_12060 PF07715 TonB-dependent Receptor Plug Domain AM462_12060 PF00593 TonB dependent receptor AM462_12065 PF13640 2OG-Fe(II) oxygenase superfamily AM462_12065 PF18331 PKHD-type hydroxylase C-terminal domain AM462_12070 PF08502 LeuA allosteric (dimerisation) domain AM462_12070 PF00682 HMGL-like AM462_12075 PF00561 alpha/beta hydrolase fold AM462_12080 PF00561 alpha/beta hydrolase fold AM462_12080 PF07021 Methionine biosynthesis protein MetW AM462_12090 PF01725 Ham1 family AM462_12100 PF02416 mttA/Hcf106 family AM462_12105 PF02416 mttA/Hcf106 family AM462_12110 PF00902 Sec-independent protein translocase protein (TatC) AM462_12130 PF01790 Prolipoprotein diacylglyceryl transferase AM462_12145 PF00303 Thymidylate synthase AM462_12150 PF00186 Dihydrofolate reductase AM462_12160 PF01625 Peptide methionine sulfoxide reductase AM462_12170 PF01618 MotA/TolQ/ExbB proton channel family AM462_12180 PF00551 Formyl transferase AM462_12180 PF01842 ACT domain AM462_12190 PF00171 Aldehyde dehydrogenase family AM462_12195 PF00830 Ribosomal L28 family AM462_12200 PF00471 Ribosomal protein L33 AM462_12205 PF02254 TrkA-N domain AM462_12205 PF00999 Sodium/hydrogen exchanger family AM462_12225 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AM462_12230 PF13361 UvrD-like helicase C-terminal domain AM462_12230 PF00580 UvrD/REP helicase N-terminal domain AM462_12245 PF01396 Topoisomerase DNA binding C4 zinc finger AM462_12245 PF01751 Toprim domain AM462_12245 PF01131 DNA topoisomerase AM462_12245 PF08272 Topoisomerase I zinc-ribbon-like AM462_12255 PF01638 HxlR-like helix-turn-helix AM462_12260 PF00107 Zinc-binding dehydrogenase AM462_12260 PF08240 Alcohol dehydrogenase GroES-like domain AM462_12275 PF01810 LysE type translocator AM462_12280 PF03279 Bacterial lipid A biosynthesis acyltransferase AM462_12290 PF00375 Sodium:dicarboxylate symporter family AM462_12300 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM462_12300 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM462_12320 PF01416 tRNA pseudouridine synthase AM462_12330 PF01176 Translation initiation factor 1A / IF-1 AM462_12345 PF00180 Isocitrate/isopropylmalate dehydrogenase AM462_12355 PF00694 Aconitase C-terminal domain AM462_12360 PF00330 Aconitase family (aconitate hydratase) AM462_12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_12370 PF03466 LysR substrate binding domain AM462_12380 PF00293 NUDIX domain AM462_12385 PF01590 GAF domain AM462_12385 PF00391 PEP-utilising enzyme, mobile domain AM462_12385 PF02896 PEP-utilising enzyme, TIM barrel domain AM462_12385 PF05524 PEP-utilising enzyme, N-terminal AM462_12390 PF00141 Peroxidase AM462_12395 PF12706 Beta-lactamase superfamily domain AM462_12400 PF03466 LysR substrate binding domain AM462_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_12410 PF02798 Glutathione S-transferase, N-terminal domain AM462_12415 PF13280 WYL domain AM462_12415 PF08279 HTH domain AM462_12420 PF13419 Haloacid dehalogenase-like hydrolase AM462_12425 PF00849 RNA pseudouridylate synthase AM462_12425 PF01479 S4 domain AM462_12435 PF12111 Polyribonucleotide phosphorylase C terminal AM462_12435 PF10150 Ribonuclease E/G family AM462_12435 PF00575 S1 RNA binding domain AM462_12440 PF13193 AMP-binding enzyme C-terminal domain AM462_12440 PF00501 AMP-binding enzyme AM462_12455 PF03466 LysR substrate binding domain AM462_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_12460 PF00106 short chain dehydrogenase AM462_12465 PF04055 Radical SAM superfamily AM462_12465 PF06969 HemN C-terminal domain AM462_12475 PF01554 MatE AM462_12480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM462_12480 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_12480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_12485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_12485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM462_12490 PF03109 ABC1 family AM462_12495 PF01197 Ribosomal protein L31 AM462_12505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM462_12525 PF03884 DNA gyrase inhibitor YacG AM462_12530 PF00753 Metallo-beta-lactamase superfamily AM462_12535 PF00762 Ferrochelatase AM462_12545 PF01177 Asp/Glu/Hydantoin racemase AM462_12565 PF01206 Sulfurtransferase TusA AM462_12570 PF03471 Transporter associated domain AM462_12570 PF00571 CBS domain AM462_12575 PF00795 Carbon-nitrogen hydrolase AM462_12580 PF01588 Putative tRNA binding domain AM462_12590 PF07963 Prokaryotic N-terminal methylation motif AM462_12590 PF08334 Type II secretion system (T2SS), protein G AM462_12595 PF00482 Type II secretion system (T2SS), protein F AM462_12600 PF00270 DEAD/DEAH box helicase AM462_12600 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM462_12600 PF18074 Primosomal protein N C-terminal domain AM462_12600 PF17764 3′ DNA-binding domain (3′BD) AM462_12600 PF00271 Helicase conserved C-terminal domain AM462_12605 PF02254 TrkA-N domain AM462_12605 PF00999 Sodium/hydrogen exchanger family AM462_12610 PF01430 Hsp33 protein AM462_12620 PF00226 DnaJ domain AM462_12620 PF01556 DnaJ C terminal domain AM462_12630 PF01544 CorA-like Mg2+ transporter protein AM462_12635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM462_12635 PF00013 KH domain AM462_12635 PF00575 S1 RNA binding domain AM462_12635 PF03725 3' exoribonuclease family, domain 2 AM462_12635 PF01138 3' exoribonuclease family, domain 1 AM462_12640 PF00312 Ribosomal protein S15 AM462_12650 PF13538 UvrD-like helicase C-terminal domain AM462_12655 PF00580 UvrD/REP helicase N-terminal domain AM462_12655 PF12705 PD-(D/E)XK nuclease superfamily AM462_12655 PF13361 UvrD-like helicase C-terminal domain AM462_12660 PF17946 RecC C-terminal domain AM462_12670 PF03976 Polyphosphate kinase 2 (PPK2) AM462_12680 PF01209 ubiE/COQ5 methyltransferase family AM462_12690 PF03109 ABC1 family AM462_12695 PF01494 FAD binding domain AM462_12700 PF01502 Phosphoribosyl-AMP cyclohydrolase AM462_12715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM462_12715 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AM462_12715 PF13244 Domain of unknown function (DUF4040) AM462_12715 PF00361 Proton-conducting membrane transporter AM462_12720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM462_12725 PF00361 Proton-conducting membrane transporter AM462_12735 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AM462_12745 PF02033 Ribosome-binding factor A AM462_12750 PF00009 Elongation factor Tu GTP binding domain AM462_12750 PF04760 Translation initiation factor IF-2, N-terminal region AM462_12750 PF08364 Bacterial translation initiation factor IF-2 associated region AM462_12750 PF11987 Translation-initiation factor 2 AM462_12755 PF08529 NusA N-terminal domain AM462_12755 PF00575 S1 RNA binding domain AM462_12755 PF13184 NusA-like KH domain AM462_12760 PF17384 RimP C-terminal SH3 domain AM462_12760 PF02576 RimP N-terminal domain AM462_12780 PF03840 Preprotein translocase SecG subunit AM462_12785 PF00121 Triosephosphate isomerase AM462_12790 PF00437 Type II/IV secretion system protein AM462_12790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM462_12795 PF00482 Type II secretion system (T2SS), protein F AM462_12800 PF01478 Type IV leader peptidase family AM462_12800 PF06750 Bacterial Peptidase A24 N-terminal domain AM462_12805 PF01121 Dephospho-CoA kinase AM462_12815 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM462_12815 PF00588 SpoU rRNA Methylase family AM462_12820 PF06865 Pyrimidine/purine nucleoside phosphorylase AM462_12830 PF02463 RecF/RecN/SMC N terminal domain AM462_12835 PF02622 Uncharacterized ACR, COG1678 AM462_12840 PF03652 Holliday junction resolvase AM462_12845 PF13533 Biotin-lipoyl like AM462_12870 PF02805 Metal binding domain of Ada AM462_12870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM462_12870 PF12833 Helix-turn-helix domain AM462_12870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM462_12875 PF01066 CDP-alcohol phosphatidyltransferase AM462_12885 PF01541 GIY-YIG catalytic domain AM462_12885 PF08459 UvrC Helix-hairpin-helix N-terminal AM462_12885 PF02151 UvrB/uvrC motif AM462_12905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM462_12905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM462_12905 PF00378 Enoyl-CoA hydratase/isomerase AM462_12910 PF00108 Thiolase, N-terminal domain AM462_12910 PF02803 Thiolase, C-terminal domain AM462_12925 PF09278 MerR, DNA binding AM462_12925 PF00376 MerR family regulatory protein AM462_12935 PF01323 DSBA-like thioredoxin domain AM462_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_12950 PF00183 Hsp90 protein AM462_12965 PF13726 Na+-H+ antiporter family AM462_12965 PF03553 Na+/H+ antiporter family AM462_12990 PF05000 RNA polymerase Rpb1, domain 4 AM462_12990 PF04983 RNA polymerase Rpb1, domain 3 AM462_12990 PF00623 RNA polymerase Rpb1, domain 2 AM462_12990 PF04997 RNA polymerase Rpb1, domain 1 AM462_12990 PF04998 RNA polymerase Rpb1, domain 5 AM462_12995 PF04563 RNA polymerase beta subunit AM462_12995 PF00562 RNA polymerase Rpb2, domain 6 AM462_12995 PF04560 RNA polymerase Rpb2, domain 7 AM462_12995 PF04565 RNA polymerase Rpb2, domain 3 AM462_12995 PF10385 RNA polymerase beta subunit external 1 domain AM462_12995 PF04561 RNA polymerase Rpb2, domain 2 AM462_13000 PF00542 Ribosomal protein L7/L12 C-terminal domain AM462_13000 PF16320 Ribosomal protein L7/L12 dimerisation domain AM462_13005 PF00466 Ribosomal protein L10 AM462_13010 PF00687 Ribosomal protein L1p/L10e family AM462_13015 PF03946 Ribosomal protein L11, N-terminal domain AM462_13015 PF00298 Ribosomal protein L11, RNA binding domain AM462_13020 PF02357 Transcription termination factor nusG AM462_13020 PF00467 KOW motif AM462_13025 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM462_13035 PF03143 Elongation factor Tu C-terminal domain AM462_13035 PF03144 Elongation factor Tu domain 2 AM462_13035 PF00009 Elongation factor Tu GTP binding domain AM462_13060 PF00425 chorismate binding enzyme AM462_13060 PF04715 Anthranilate synthase component I, N terminal region AM462_13065 PF13419 Haloacid dehalogenase-like hydrolase AM462_13070 PF12401 Protein of unknown function (DUF2662) AM462_13070 PF00498 FHA domain AM462_13075 PF03958 Bacterial type II/III secretion system short domain AM462_13075 PF00263 Bacterial type II and III secretion system protein AM462_13090 PF00816 H-NS histone family AM462_13115 PF03900 Porphobilinogen deaminase, C-terminal domain AM462_13115 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM462_13120 PF04397 LytTr DNA-binding domain AM462_13120 PF00072 Response regulator receiver domain AM462_13125 PF06580 Histidine kinase AM462_13125 PF07694 5TMR of 5TMR-LYT AM462_13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_13130 PF00206 Lyase AM462_13130 PF14698 Argininosuccinate lyase C-terminal AM462_13135 PF04362 Bacterial Fe(2+) trafficking AM462_13140 PF01895 PhoU domain AM462_13145 PF02321 Outer membrane efflux protein AM462_13150 PF00892 EamA-like transporter family AM462_13165 PF01964 Radical SAM ThiC family AM462_13165 PF13667 ThiC-associated domain AM462_13170 PF00293 NUDIX domain AM462_13175 PF00149 Calcineurin-like phosphoesterase AM462_13180 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM462_13185 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM462_13190 PF01098 Cell cycle protein AM462_13195 PF02875 Mur ligase family, glutamate ligase domain AM462_13195 PF08245 Mur ligase middle domain AM462_13205 PF07664 Ferrous iron transport protein B C terminus AM462_13205 PF07670 Nucleoside recognition AM462_13205 PF02421 Ferrous iron transport protein B AM462_13215 PF02899 Phage integrase, N-terminal SAM-like domain AM462_13215 PF00589 Phage integrase family AM462_13220 PF10411 Disulfide bond isomerase protein N-terminus AM462_13220 PF13098 Thioredoxin-like domain AM462_13225 PF00742 Homoserine dehydrogenase AM462_13225 PF01842 ACT domain AM462_13225 PF03447 Homoserine dehydrogenase, NAD binding domain AM462_13230 PF00291 Pyridoxal-phosphate dependent enzyme AM462_13235 PF00768 D-alanyl-D-alanine carboxypeptidase AM462_13240 PF00072 Response regulator receiver domain AM462_13240 PF00196 Bacterial regulatory proteins, luxR family AM462_13245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_13245 PF00512 His Kinase A (phospho-acceptor) domain AM462_13250 PF00158 Sigma-54 interaction domain AM462_13250 PF00072 Response regulator receiver domain AM462_13250 PF02954 Bacterial regulatory protein, Fis family AM462_13255 PF00595 PDZ domain AM462_13255 PF03572 Peptidase family S41 AM462_13260 PF01676 Metalloenzyme superfamily AM462_13260 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM462_13265 PF03739 Lipopolysaccharide export system permease LptF/LptG AM462_13275 PF00883 Cytosol aminopeptidase family, catalytic domain AM462_13275 PF02789 Cytosol aminopeptidase family, N-terminal domain AM462_13295 PF00677 Lumazine binding domain AM462_13305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM462_13305 PF01872 RibD C-terminal domain AM462_13310 PF03477 ATP cone domain AM462_13315 PF00909 Ammonium Transporter Family AM462_13320 PF00543 Nitrogen regulatory protein P-II AM462_13330 PF01078 Magnesium chelatase, subunit ChlI AM462_13330 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM462_13340 PF00916 Sulfate permease family AM462_13340 PF01740 STAS domain AM462_13360 PF01252 Signal peptidase (SPase) II AM462_13370 PF13411 MerR HTH family regulatory protein AM462_13375 PF03743 Bacterial conjugation TrbI-like protein AM462_13405 PF00809 Pterin binding enzyme AM462_13410 PF00893 Small Multidrug Resistance protein AM462_13415 PF01909 Nucleotidyltransferase domain AM462_13415 PF13427 Domain of unknown function (DUF4111) AM462_13430 PF00583 Acetyltransferase (GNAT) family AM462_13435 PF00589 Phage integrase family AM462_13435 PF13495 Phage integrase, N-terminal SAM-like domain AM462_13440 PF11809 Domain of unknown function (DUF3330) AM462_13440 PF00563 EAL domain AM462_13445 PF13610 DDE domain AM462_13450 PF01636 Phosphotransferase enzyme family AM462_13465 PF13610 DDE domain AM462_13470 PF00701 Dihydrodipicolinate synthetase family AM462_13480 PF03573 outer membrane porin, OprD family AM462_13485 PF00719 Inorganic pyrophosphatase AM462_13500 PF13193 AMP-binding enzyme C-terminal domain AM462_13500 PF00501 AMP-binding enzyme AM462_13505 PF03989 DNA gyrase C-terminal domain, beta-propeller AM462_13505 PF00521 DNA gyrase/topoisomerase IV, subunit A AM462_13510 PF07690 Major Facilitator Superfamily AM462_13515 PF03458 UPF0126 domain AM462_13520 PF02810 SEC-C motif AM462_13525 PF03471 Transporter associated domain AM462_13525 PF03741 Integral membrane protein TerC family AM462_13530 PF03641 Possible lysine decarboxylase AM462_13535 PF07690 Major Facilitator Superfamily AM462_13545 PF00817 impB/mucB/samB family AM462_13545 PF11798 IMS family HHH motif AM462_13545 PF11799 impB/mucB/samB family C-terminal domain AM462_13560 PF04055 Radical SAM superfamily AM462_13560 PF08497 Radical SAM N-terminal AM462_13560 PF11842 Domain of unknown function (DUF3362) AM462_13590 PF00291 Pyridoxal-phosphate dependent enzyme AM462_13625 PF00440 Bacterial regulatory proteins, tetR family AM462_13650 PF01327 Polypeptide deformylase AM462_13660 PF02481 DNA recombination-mediator protein A AM462_13660 PF17782 DprA winged helix domain AM462_13665 PF01300 Telomere recombination AM462_13670 PF00892 EamA-like transporter family AM462_13675 PF00440 Bacterial regulatory proteins, tetR family AM462_13680 PF07690 Major Facilitator Superfamily AM462_13690 PF00255 Glutathione peroxidase AM462_13700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM462_13705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM462_13705 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM462_13710 PF00231 ATP synthase AM462_13715 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM462_13715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM462_13715 PF00306 ATP synthase alpha/beta chain, C terminal domain AM462_13720 PF00213 ATP synthase delta (OSCP) subunit AM462_13725 PF00430 ATP synthase B/B' CF(0) AM462_13730 PF00137 ATP synthase subunit C AM462_13735 PF00119 ATP synthase A chain AM462_13755 PF00005 ABC transporter AM462_13760 PF00950 ABC 3 transport family AM462_13765 PF01810 LysE type translocator AM462_13770 PF04261 Dyp-type peroxidase family AM462_13775 PF00390 Malic enzyme, N-terminal domain AM462_13775 PF03949 Malic enzyme, NAD binding domain AM462_13780 PF05746 DALR anticodon binding domain AM462_13780 PF03485 Arginyl tRNA synthetase N terminal domain AM462_13780 PF00750 tRNA synthetases class I (R) AM462_13800 PF05726 Pirin C-terminal cupin domain AM462_13800 PF02678 Pirin AM462_13810 PF03551 Transcriptional regulator PadR-like family AM462_13815 PF01909 Nucleotidyltransferase domain AM462_13815 PF13427 Domain of unknown function (DUF4111) AM462_13820 PF02540 NAD synthase AM462_13820 PF00958 GMP synthase C terminal domain AM462_13820 PF00117 Glutamine amidotransferase class-I AM462_13825 PF04286 Protein of unknown function (DUF445) AM462_13830 PF07681 DoxX AM462_13835 PF09335 SNARE associated Golgi protein AM462_13850 PF13614 AAA domain AM462_13860 PF01722 BolA-like protein AM462_13895 PF07120 Protein of unknown function (DUF1376) AM462_13910 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM462_13910 PF18766 SWI2/SNF2 ATPase AM462_13910 PF12008 Type I restriction and modification enzyme - subunit R C terminal AM462_13920 PF01420 Type I restriction modification DNA specificity domain AM462_13925 PF12161 HsdM N-terminal domain AM462_13925 PF02384 N-6 DNA Methylase AM462_13980 PF01219 Prokaryotic diacylglycerol kinase AM462_13990 PF08521 Two-component sensor kinase N-terminal AM462_13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_13990 PF00512 His Kinase A (phospho-acceptor) domain AM462_13995 PF00486 Transcriptional regulatory protein, C terminal AM462_13995 PF00072 Response regulator receiver domain AM462_14000 PF08019 Phosphoethanolamine transferase EptA/EptB AM462_14000 PF00884 Sulfatase AM462_14010 PF00717 Peptidase S24-like AM462_14015 PF13438 Domain of unknown function (DUF4113) AM462_14015 PF00817 impB/mucB/samB family AM462_14015 PF11798 IMS family HHH motif AM462_14015 PF11799 impB/mucB/samB family C-terminal domain AM462_14030 PF02601 Exonuclease VII, large subunit AM462_14030 PF13742 OB-fold nucleic acid binding domain AM462_14055 PF00719 Inorganic pyrophosphatase AM462_14060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM462_14070 PF01740 STAS domain AM462_14070 PF00916 Sulfate permease family AM462_14085 PF00809 Pterin binding enzyme AM462_14090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_14090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_14090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_14090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_14105 PF13610 DDE domain AM462_14115 PF03389 MobA/MobL family AM462_14115 PF01443 Viral (Superfamily 1) RNA helicase AM462_14115 PF17841 BID domain of Bartonella effector protein (Bep) AM462_14125 PF13936 Helix-turn-helix domain AM462_14125 PF00665 Integrase core domain AM462_14145 PF00118 TCP-1/cpn60 chaperonin family AM462_14150 PF00166 Chaperonin 10 Kd subunit AM462_14155 PF03091 CutA1 divalent ion tolerance protein AM462_14160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM462_14165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM462_14175 PF00753 Metallo-beta-lactamase superfamily AM462_14180 PF00665 Integrase core domain AM462_14180 PF13936 Helix-turn-helix domain AM462_14200 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM462_14205 PF01636 Phosphotransferase enzyme family AM462_14220 PF13610 DDE domain AM462_14225 PF01648 4'-phosphopantetheinyl transferase superfamily AM462_14230 PF12697 Alpha/beta hydrolase family AM462_14245 PF13193 AMP-binding enzyme C-terminal domain AM462_14245 PF00668 Condensation domain AM462_14245 PF00550 Phosphopantetheine attachment site AM462_14245 PF00975 Thioesterase domain AM462_14245 PF00501 AMP-binding enzyme AM462_14250 PF08242 Methyltransferase domain AM462_14250 PF00550 Phosphopantetheine attachment site AM462_14250 PF02801 Beta-ketoacyl synthase, C-terminal domain AM462_14250 PF14765 Polyketide synthase dehydratase AM462_14250 PF16197 Ketoacyl-synthetase C-terminal extension AM462_14250 PF00975 Thioesterase domain AM462_14250 PF00109 Beta-ketoacyl synthase, N-terminal domain AM462_14255 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_14255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_14255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_14260 PF00501 AMP-binding enzyme AM462_14265 PF03472 Autoinducer binding domain AM462_14265 PF00196 Bacterial regulatory proteins, luxR family AM462_14275 PF00765 Autoinducer synthase AM462_14280 PF07690 Major Facilitator Superfamily AM462_14280 PF00083 Sugar (and other) transporter AM462_14285 PF00378 Enoyl-CoA hydratase/isomerase AM462_14290 PF00378 Enoyl-CoA hydratase/isomerase AM462_14295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_14295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_14295 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_14300 PF00501 AMP-binding enzyme AM462_14300 PF13193 AMP-binding enzyme C-terminal domain AM462_14305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM462_14305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM462_14310 PF00171 Aldehyde dehydrogenase family AM462_14320 PF00324 Amino acid permease AM462_14325 PF00324 Amino acid permease AM462_14330 PF01042 Endoribonuclease L-PSP AM462_14335 PF01168 Alanine racemase, N-terminal domain AM462_14335 PF00842 Alanine racemase, C-terminal domain AM462_14340 PF01266 FAD dependent oxidoreductase AM462_14345 PF01037 Lrp/AsnC ligand binding domain AM462_14355 PF00593 TonB dependent receptor AM462_14355 PF07715 TonB-dependent Receptor Plug Domain AM462_14370 PF00849 RNA pseudouridylate synthase AM462_14420 PF00330 Aconitase family (aconitate hydratase) AM462_14420 PF00694 Aconitase C-terminal domain AM462_14425 PF00285 Citrate synthase, C-terminal domain AM462_14435 PF00392 Bacterial regulatory proteins, gntR family AM462_14435 PF07729 FCD domain AM462_14440 PF00155 Aminotransferase class I and II AM462_14445 PF01565 FAD binding domain AM462_14445 PF09330 D-lactate dehydrogenase, membrane binding AM462_14450 PF01070 FMN-dependent dehydrogenase AM462_14455 PF00392 Bacterial regulatory proteins, gntR family AM462_14455 PF07729 FCD domain AM462_14460 PF02652 L-lactate permease AM462_14465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_14465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_14465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_14465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_14470 PF00342 Phosphoglucose isomerase AM462_14475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM462_14475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM462_14475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM462_14480 PF00483 Nucleotidyl transferase AM462_14485 PF02719 Polysaccharide biosynthesis protein AM462_14490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM462_14495 PF17836 PglD N-terminal domain AM462_14495 PF14602 Hexapeptide repeat of succinyl-transferase AM462_14495 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_14500 PF02397 Bacterial sugar transferase AM462_14505 PF13477 Glycosyl transferase 4-like AM462_14505 PF00534 Glycosyl transferases group 1 AM462_14515 PF00534 Glycosyl transferases group 1 AM462_14515 PF13439 Glycosyltransferase Family 4 AM462_14530 PF01370 NAD dependent epimerase/dehydratase family AM462_14535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM462_14535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM462_14535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM462_14540 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM462_14540 PF10531 SLBB domain AM462_14540 PF02563 Polysaccharide biosynthesis/export protein AM462_14545 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM462_14550 PF02706 Chain length determinant protein AM462_14550 PF13614 AAA domain AM462_14550 PF13807 G-rich domain on putative tyrosine kinase AM462_14555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM462_14555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_14560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_14560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM462_14565 PF03023 Lipid II flippase MurJ AM462_14570 PF01510 N-acetylmuramoyl-L-alanine amidase AM462_14575 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM462_14575 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM462_14585 PF04185 Phosphoesterase family AM462_14585 PF05506 Domain of unknown function (DUF756) AM462_14595 PF03725 3' exoribonuclease family, domain 2 AM462_14595 PF01138 3' exoribonuclease family, domain 1 AM462_14600 PF00487 Fatty acid desaturase AM462_14605 PF00175 Oxidoreductase NAD-binding domain AM462_14610 PF00440 Bacterial regulatory proteins, tetR family AM462_14615 PF00440 Bacterial regulatory proteins, tetR family AM462_14615 PF08360 QacR-like protein, C-terminal region AM462_14620 PF01323 DSBA-like thioredoxin domain AM462_14630 PF13419 Haloacid dehalogenase-like hydrolase AM462_14635 PF00106 short chain dehydrogenase AM462_14650 PF00696 Amino acid kinase family AM462_14650 PF00583 Acetyltransferase (GNAT) family AM462_14655 PF09084 NMT1/THI5 like AM462_14660 PF09084 NMT1/THI5 like AM462_14665 PF00296 Luciferase-like monooxygenase AM462_14670 PF00528 Binding-protein-dependent transport system inner membrane component AM462_14675 PF00005 ABC transporter AM462_14680 PF00440 Bacterial regulatory proteins, tetR family AM462_14680 PF08362 YcdC-like protein, C-terminal region AM462_14685 PF01048 Phosphorylase superfamily AM462_14695 PF06574 FAD synthetase AM462_14695 PF01687 Riboflavin kinase AM462_14700 PF08264 Anticodon-binding domain of tRNA AM462_14700 PF00133 tRNA synthetases class I (I, L, M and V) AM462_14700 PF06827 Zinc finger found in FPG and IleRS AM462_14705 PF01252 Signal peptidase (SPase) II AM462_14710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM462_14750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM462_14755 PF07859 alpha/beta hydrolase fold AM462_14780 PF01025 GrpE AM462_14785 PF00012 Hsp70 protein AM462_14805 PF13406 Transglycosylase SLT domain AM462_14810 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM462_14810 PF02222 ATP-grasp domain AM462_14815 PF00731 AIR carboxylase AM462_14830 PF01225 Mur ligase family, catalytic domain AM462_14830 PF02875 Mur ligase family, glutamate ligase domain AM462_14830 PF08245 Mur ligase middle domain AM462_14840 PF01569 PAP2 superfamily AM462_14845 PF03741 Integral membrane protein TerC family AM462_14855 PF03738 Glutathionylspermidine synthase preATP-grasp AM462_14860 PF00355 Rieske [2Fe-2S] domain AM462_14865 PF01979 Amidohydrolase family AM462_14870 PF00156 Phosphoribosyl transferase domain AM462_14880 PF10411 Disulfide bond isomerase protein N-terminus AM462_14880 PF13098 Thioredoxin-like domain AM462_14885 PF01545 Cation efflux family AM462_14885 PF16916 Dimerisation domain of Zinc Transporter AM462_14890 PF02583 Metal-sensitive transcriptional repressor AM462_14895 PF01926 50S ribosome-binding GTPase AM462_14895 PF12631 MnmE helical domain AM462_14895 PF10396 GTP-binding protein TrmE N-terminus AM462_14900 PF14849 YidC periplasmic domain AM462_14900 PF02096 60Kd inner membrane protein AM462_14905 PF01809 Putative membrane protein insertion efficiency factor AM462_14910 PF00825 Ribonuclease P AM462_14915 PF00468 Ribosomal protein L34 AM462_14920 PF11638 DnaA N-terminal domain AM462_14920 PF08299 Bacterial dnaA protein helix-turn-helix AM462_14920 PF00308 Bacterial dnaA protein AM462_14925 PF02768 DNA polymerase III beta subunit, C-terminal domain AM462_14925 PF02767 DNA polymerase III beta subunit, central domain AM462_14925 PF00712 DNA polymerase III beta subunit, N-terminal domain AM462_14930 PF02463 RecF/RecN/SMC N terminal domain AM462_14935 PF00986 DNA gyrase B subunit, carboxyl terminus AM462_14935 PF01751 Toprim domain AM462_14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_14935 PF18053 DNA gyrase B subunit insert domain AM462_14935 PF00204 DNA gyrase B AM462_14945 PF09335 SNARE associated Golgi protein AM462_14950 PF12848 ABC transporter AM462_14950 PF00005 ABC transporter AM462_14970 PF01521 Iron-sulphur cluster biosynthesis AM462_14975 PF00561 alpha/beta hydrolase fold AM462_14980 PF03702 Anhydro-N-acetylmuramic acid kinase AM462_14985 PF00579 tRNA synthetases class I (W and Y) AM462_15030 PF00209 Sodium:neurotransmitter symporter family AM462_15040 PF01029 NusB family AM462_15040 PF01189 16S rRNA methyltransferase RsmB/F AM462_15045 PF00551 Formyl transferase AM462_15045 PF02911 Formyl transferase, C-terminal domain AM462_15050 PF00920 Dehydratase family AM462_15065 PF03466 LysR substrate binding domain AM462_15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_15070 PF00860 Permease family AM462_15075 PF00311 Phosphoenolpyruvate carboxylase AM462_15080 PF00440 Bacterial regulatory proteins, tetR family AM462_15080 PF08361 MAATS-type transcriptional repressor, C-terminal region AM462_15085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_15090 PF00873 AcrB/AcrD/AcrF family AM462_15100 PF01556 DnaJ C terminal domain AM462_15100 PF00226 DnaJ domain AM462_15100 PF00684 DnaJ central domain AM462_15110 PF01113 Dihydrodipicolinate reductase, N-terminus AM462_15110 PF05173 Dihydrodipicolinate reductase, C-terminus AM462_15120 PF07690 Major Facilitator Superfamily AM462_15125 PF00248 Aldo/keto reductase family AM462_15130 PF03466 LysR substrate binding domain AM462_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_15145 PF00392 Bacterial regulatory proteins, gntR family AM462_15145 PF00155 Aminotransferase class I and II AM462_15150 PF00107 Zinc-binding dehydrogenase AM462_15150 PF08240 Alcohol dehydrogenase GroES-like domain AM462_15155 PF03352 Methyladenine glycosylase AM462_15170 PF10576 Iron-sulfur binding domain of endonuclease III AM462_15170 PF00730 HhH-GPD superfamily base excision DNA repair protein AM462_15170 PF14815 NUDIX domain AM462_15170 PF00633 Helix-hairpin-helix motif AM462_15185 PF07043 Protein of unknown function (DUF1328) AM462_15190 PF03692 Putative zinc- or iron-chelating domain AM462_15195 PF07995 Glucose / Sorbosone dehydrogenase AM462_15200 PF12002 MgsA AAA+ ATPase C terminal AM462_15200 PF16193 AAA C-terminal domain AM462_15200 PF00004 ATPase family associated with various cellular activities (AAA) AM462_15205 PF01226 Formate/nitrite transporter AM462_15215 PF01259 SAICAR synthetase AM462_15225 PF00701 Dihydrodipicolinate synthetase family AM462_15230 PF00857 Isochorismatase family AM462_15235 PF01758 Sodium Bile acid symporter family AM462_15240 PF01554 MatE AM462_15245 PF04463 Protein of unknown function (DUF523) AM462_15250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM462_15260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM462_15265 PF14497 Glutathione S-transferase, C-terminal domain AM462_15265 PF02798 Glutathione S-transferase, N-terminal domain AM462_15275 PF00324 Amino acid permease AM462_15285 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM462_15285 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM462_15295 PF07702 UTRA domain AM462_15295 PF00392 Bacterial regulatory proteins, gntR family AM462_15300 PF05962 HutD AM462_15305 PF17391 Urocanase N-terminal domain AM462_15305 PF01175 Urocanase Rossmann-like domain AM462_15305 PF17392 Urocanase C-terminal domain AM462_15310 PF00221 Aromatic amino acid lyase AM462_15315 PF00324 Amino acid permease AM462_15320 PF01979 Amidohydrolase family AM462_15325 PF00491 Arginase family AM462_15340 PF01177 Asp/Glu/Hydantoin racemase AM462_15355 PF00145 C-5 cytosine-specific DNA methylase AM462_15360 PF08676 MutL C terminal dimerisation domain AM462_15360 PF01119 DNA mismatch repair protein, C-terminal domain AM462_15380 PF00582 Universal stress protein family AM462_15385 PF01740 STAS domain AM462_15385 PF00916 Sulfate permease family AM462_15415 PF00589 Phage integrase family AM462_15415 PF02899 Phage integrase, N-terminal SAM-like domain AM462_15440 PF00665 Integrase core domain AM462_15465 PF00809 Pterin binding enzyme AM462_15470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_15470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_15470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_15470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_15480 PF07690 Major Facilitator Superfamily AM462_15485 PF02909 Tetracyclin repressor-like, C-terminal domain AM462_15485 PF00440 Bacterial regulatory proteins, tetR family AM462_15510 PF00239 Resolvase, N terminal domain AM462_15510 PF02796 Helix-turn-helix domain of resolvase AM462_15520 PF13610 DDE domain AM462_15535 PF01636 Phosphotransferase enzyme family AM462_15560 PF07091 Ribosomal RNA methyltransferase (FmrO) AM462_15585 PF00809 Pterin binding enzyme AM462_15615 PF00809 Pterin binding enzyme AM462_15620 PF00893 Small Multidrug Resistance protein AM462_15630 PF07690 Major Facilitator Superfamily AM462_15640 PF13495 Phage integrase, N-terminal SAM-like domain AM462_15640 PF00589 Phage integrase family AM462_15645 PF13610 DDE domain AM462_15705 PF08535 KorB domain AM462_15705 PF06613 KorB C-terminal beta-barrel domain AM462_15705 PF02195 ParB-like nuclease domain AM462_15710 PF13614 AAA domain AM462_15725 PF00809 Pterin binding enzyme AM462_15730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_15730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_15730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_15730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_15750 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM462_15760 PF00589 Phage integrase family AM462_15760 PF13495 Phage integrase, N-terminal SAM-like domain AM462_15765 PF13495 Phage integrase, N-terminal SAM-like domain AM462_15765 PF00589 Phage integrase family AM462_15770 PF00186 Dihydrofolate reductase AM462_15775 PF00583 Acetyltransferase (GNAT) family AM462_15810 PF18623 TnsE C-terminal domain AM462_15815 PF06527 TniQ AM462_15815 PF15978 Tn7-like transposition protein D AM462_15820 PF13401 AAA domain AM462_15820 PF11426 Tn7 transposition regulator TnsC AM462_15825 PF00665 Integrase core domain AM462_15830 PF08721 TnsA endonuclease C terminal AM462_15830 PF08722 TnsA endonuclease N terminal AM462_15835 PF01380 SIS domain AM462_15840 PF14602 Hexapeptide repeat of succinyl-transferase AM462_15840 PF12804 MobA-like NTP transferase domain AM462_15840 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_15845 PF04608 Phosphatidylglycerophosphatase A AM462_15850 PF00586 AIR synthase related protein, N-terminal domain AM462_15850 PF02769 AIR synthase related protein, C-terminal domain AM462_15855 PF01029 NusB family AM462_15860 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM462_15865 PF00925 GTP cyclohydrolase II AM462_15865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM462_15895 PF02580 D-Tyr-tRNA(Tyr) deacylase AM462_15900 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM462_15900 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM462_15905 PF00581 Rhodanese-like domain AM462_15910 PF02666 Phosphatidylserine decarboxylase AM462_15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_15920 PF00512 His Kinase A (phospho-acceptor) domain AM462_15920 PF00989 PAS fold AM462_15920 PF11808 Phosphate regulon sensor protein PhoR AM462_15925 PF00486 Transcriptional regulatory protein, C terminal AM462_15925 PF00072 Response regulator receiver domain AM462_15935 PF00106 short chain dehydrogenase AM462_15940 PF01554 MatE AM462_15945 PF00155 Aminotransferase class I and II AM462_15950 PF04286 Protein of unknown function (DUF445) AM462_15965 PF04262 Glutamate-cysteine ligase AM462_15970 PF02600 Disulfide bond formation protein DsbB AM462_15975 PF04717 Type VI secretion system, phage-baseplate injector AM462_15980 PF01510 N-acetylmuramoyl-L-alanine amidase AM462_15980 PF01476 LysM domain AM462_15980 PF01471 Putative peptidoglycan binding domain AM462_16010 PF05728 Uncharacterised protein family (UPF0227) AM462_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_16015 PF01751 Toprim domain AM462_16015 PF00986 DNA gyrase B subunit, carboxyl terminus AM462_16015 PF00204 DNA gyrase B AM462_16020 PF04115 Ureidoglycolate lyase AM462_16025 PF03561 Allantoicase repeat AM462_16030 PF01494 FAD binding domain AM462_16040 PF00860 Permease family AM462_16045 PF00576 HIUase/Transthyretin family AM462_16075 PF11412 Disulphide bond corrector protein DsbC AM462_16075 PF02683 Cytochrome C biogenesis protein transmembrane region AM462_16080 PF07694 5TMR of 5TMR-LYT AM462_16080 PF00990 Diguanylate cyclase, GGDEF domain AM462_16085 PF07859 alpha/beta hydrolase fold AM462_16095 PF03960 ArsC family AM462_16100 PF03372 Endonuclease/Exonuclease/phosphatase family AM462_16105 PF00156 Phosphoribosyl transferase domain AM462_16110 PF07715 TonB-dependent Receptor Plug Domain AM462_16110 PF00593 TonB dependent receptor AM462_16120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM462_16120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM462_16125 PF04101 Glycosyltransferase family 28 C-terminal domain AM462_16125 PF03033 Glycosyltransferase family 28 N-terminal domain AM462_16130 PF01225 Mur ligase family, catalytic domain AM462_16130 PF02875 Mur ligase family, glutamate ligase domain AM462_16130 PF08245 Mur ligase middle domain AM462_16135 PF07478 D-ala D-ala ligase C-terminus AM462_16135 PF01820 D-ala D-ala ligase N-terminus AM462_16140 PF08478 POTRA domain, FtsQ-type AM462_16140 PF03799 Cell division protein FtsQ AM462_16145 PF02491 SHS2 domain inserted in FTSA AM462_16150 PF12327 FtsZ family, C-terminal domain AM462_16150 PF00091 Tubulin/FtsZ family, GTPase domain AM462_16155 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM462_16165 PF01551 Peptidase family M23 AM462_16170 PF00456 Transketolase, thiamine diphosphate binding domain AM462_16170 PF17831 Pyruvate dehydrogenase E1 component middle domain AM462_16175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM462_16175 PF00364 Biotin-requiring enzyme AM462_16175 PF02817 e3 binding domain AM462_16185 PF01169 Uncharacterized protein family UPF0016 AM462_16190 PF07715 TonB-dependent Receptor Plug Domain AM462_16190 PF00593 TonB dependent receptor AM462_16195 PF00258 Flavodoxin AM462_16195 PF01613 Flavin reductase like domain AM462_16200 PF03692 Putative zinc- or iron-chelating domain AM462_16205 PF00478 IMP dehydrogenase / GMP reductase domain AM462_16205 PF00571 CBS domain AM462_16210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM462_16210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM462_16210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM462_16210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM462_16215 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM462_16215 PF01243 Pyridoxamine 5'-phosphate oxidase AM462_16220 PF02272 DHHA1 domain AM462_16220 PF01368 DHH family AM462_16220 PF17768 RecJ OB domain AM462_16240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_16245 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM462_16250 PF04452 RNA methyltransferase AM462_16255 PF00924 Mechanosensitive ion channel AM462_16265 PF16177 Acetyl-coenzyme A synthetase N-terminus AM462_16265 PF00501 AMP-binding enzyme AM462_16265 PF13193 AMP-binding enzyme C-terminal domain AM462_16270 PF00857 Isochorismatase family AM462_16275 PF01037 Lrp/AsnC ligand binding domain AM462_16280 PF00296 Luciferase-like monooxygenase AM462_16285 PF03358 NADPH-dependent FMN reductase AM462_16290 PF00072 Response regulator receiver domain AM462_16290 PF00196 Bacterial regulatory proteins, luxR family AM462_16300 PF00672 HAMP domain AM462_16300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_16300 PF00512 His Kinase A (phospho-acceptor) domain AM462_16300 PF01627 Hpt domain AM462_16300 PF00072 Response regulator receiver domain AM462_16305 PF04341 Protein of unknown function, DUF485 AM462_16310 PF00474 Sodium:solute symporter family AM462_16320 PF02028 BCCT, betaine/carnitine/choline family transporter AM462_16330 PF17158 Membrane-associated sensor, integral membrane domain AM462_16330 PF00990 Diguanylate cyclase, GGDEF domain AM462_16335 PF17760 UvrA interaction domain AM462_16335 PF00005 ABC transporter AM462_16335 PF17755 UvrA DNA-binding domain AM462_16340 PF00440 Bacterial regulatory proteins, tetR family AM462_16340 PF16925 Tetracyclin repressor-like, C-terminal domain AM462_16345 PF08240 Alcohol dehydrogenase GroES-like domain AM462_16345 PF00107 Zinc-binding dehydrogenase AM462_16355 PF06942 GlpM protein AM462_16360 PF08543 Phosphomethylpyrimidine kinase AM462_16360 PF03070 TENA/THI-4/PQQC family AM462_16360 PF02581 Thiamine monophosphate synthase AM462_16370 PF07690 Major Facilitator Superfamily AM462_16375 PF00436 Single-strand binding protein family AM462_16385 PF03591 AzlC protein AM462_16395 PF00324 Amino acid permease AM462_16400 PF00155 Aminotransferase class I and II AM462_16400 PF00392 Bacterial regulatory proteins, gntR family AM462_16405 PF00202 Aminotransferase class-III AM462_16410 PF00171 Aldehyde dehydrogenase family AM462_16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_16420 PF00857 Isochorismatase family AM462_16425 PF05726 Pirin C-terminal cupin domain AM462_16425 PF02678 Pirin AM462_16430 PF01593 Flavin containing amine oxidoreductase AM462_16450 PF07690 Major Facilitator Superfamily AM462_16455 PF03466 LysR substrate binding domain AM462_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_16475 PF00248 Aldo/keto reductase family AM462_16480 PF02311 AraC-like ligand binding domain AM462_16480 PF12833 Helix-turn-helix domain AM462_16500 PF01638 HxlR-like helix-turn-helix AM462_16515 PF01638 HxlR-like helix-turn-helix AM462_16525 PF02525 Flavodoxin-like fold AM462_16535 PF13302 Acetyltransferase (GNAT) domain AM462_16545 PF02705 K+ potassium transporter AM462_16575 PF00230 Major intrinsic protein AM462_16590 PF00977 Histidine biosynthesis protein AM462_16595 PF01636 Phosphotransferase enzyme family AM462_16620 PF00977 Histidine biosynthesis protein AM462_16635 PF00117 Glutamine amidotransferase class-I AM462_16640 PF00475 Imidazoleglycerol-phosphate dehydratase AM462_16660 PF00583 Acetyltransferase (GNAT) family AM462_16665 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM462_16665 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM462_16675 PF00512 His Kinase A (phospho-acceptor) domain AM462_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_16675 PF00672 HAMP domain AM462_16680 PF00072 Response regulator receiver domain AM462_16680 PF00486 Transcriptional regulatory protein, C terminal AM462_16685 PF16921 Tex protein YqgF-like domain AM462_16685 PF00575 S1 RNA binding domain AM462_16685 PF09371 Tex-like protein N-terminal domain AM462_16685 PF17674 HHH domain AM462_16690 PF01740 STAS domain AM462_16690 PF00916 Sulfate permease family AM462_16695 PF00106 short chain dehydrogenase AM462_16700 PF01053 Cys/Met metabolism PLP-dependent enzyme AM462_16705 PF00005 ABC transporter AM462_16705 PF12848 ABC transporter AM462_16730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_16730 PF00529 HlyD membrane-fusion protein of T1SS AM462_16735 PF00873 AcrB/AcrD/AcrF family AM462_16740 PF01545 Cation efflux family AM462_16770 PF00324 Amino acid permease AM462_16785 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM462_16800 PF01795 MraW methylase family AM462_16810 PF00905 Penicillin binding protein transpeptidase domain AM462_16810 PF03717 Penicillin-binding Protein dimerisation domain AM462_16815 PF01225 Mur ligase family, catalytic domain AM462_16815 PF02875 Mur ligase family, glutamate ligase domain AM462_16815 PF08245 Mur ligase middle domain AM462_16820 PF01225 Mur ligase family, catalytic domain AM462_16820 PF08245 Mur ligase middle domain AM462_16820 PF02875 Mur ligase family, glutamate ligase domain AM462_16825 PF00953 Glycosyl transferase family 4 AM462_16835 PF13847 Methyltransferase domain AM462_16840 PF00905 Penicillin binding protein transpeptidase domain AM462_16840 PF00912 Transglycosylase AM462_16840 PF17092 Penicillin-binding protein OB-like domain AM462_16865 PF03958 Bacterial type II/III secretion system short domain AM462_16865 PF11741 AMIN domain AM462_16865 PF00263 Bacterial type II and III secretion system protein AM462_16865 PF07660 Secretin and TonB N terminus short domain AM462_16870 PF01202 Shikimate kinase AM462_16875 PF01761 3-dehydroquinate synthase AM462_16885 PF01493 GXGXG motif AM462_16885 PF01645 Conserved region in glutamate synthase AM462_16885 PF00310 Glutamine amidotransferases class-II AM462_16885 PF04898 Glutamate synthase central domain AM462_16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_16890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM462_16900 PF04011 LemA family AM462_16905 PF04536 TPM domain AM462_16915 PF00114 Pilin (bacterial filament) AM462_16915 PF07963 Prokaryotic N-terminal methylation motif AM462_16920 PF11846 Virulence factor membrane-bound polymerase, C-terminal AM462_16920 PF15864 Protein glycosylation ligase AM462_16920 PF04932 O-Antigen ligase AM462_16925 PF00210 Ferritin-like domain AM462_16930 PF04324 BFD-like [2Fe-2S] binding domain AM462_16935 PF01042 Endoribonuclease L-PSP AM462_16940 PF04607 Region found in RelA / SpoT proteins AM462_16940 PF13291 ACT domain AM462_16940 PF02824 TGS domain AM462_16950 PF01192 RNA polymerase Rpb6 AM462_16955 PF00625 Guanylate kinase AM462_16960 PF02401 LytB protein AM462_17000 PF00886 Ribosomal protein S16 AM462_17005 PF01782 RimM N-terminal domain AM462_17005 PF05239 PRC-barrel domain AM462_17010 PF01746 tRNA (Guanine-1)-methyltransferase AM462_17015 PF01245 Ribosomal protein L19 AM462_17020 PF00561 alpha/beta hydrolase fold AM462_17025 PF03280 Proteobacterial lipase chaperone protein AM462_17030 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM462_17030 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM462_17030 PF09157 Pseudouridine synthase II TruB, C-terminal AM462_17035 PF01925 Sulfite exporter TauE/SafE AM462_17045 PF00892 EamA-like transporter family AM462_17050 PF00892 EamA-like transporter family AM462_17055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM462_17055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM462_17060 PF01565 FAD binding domain AM462_17060 PF02913 FAD linked oxidases, C-terminal domain AM462_17070 PF03992 Antibiotic biosynthesis monooxygenase AM462_17075 PF02525 Flavodoxin-like fold AM462_17085 PF07690 Major Facilitator Superfamily AM462_17090 PF12805 FUSC-like inner membrane protein yccS AM462_17095 PF00080 Copper/zinc superoxide dismutase (SODC) AM462_17100 PF01594 AI-2E family transporter AM462_17105 PF13614 AAA domain AM462_17125 PF08241 Methyltransferase domain AM462_17135 PF00324 Amino acid permease AM462_17140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM462_17140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM462_17145 PF00202 Aminotransferase class-III AM462_17150 PF04958 Arginine N-succinyltransferase beta subunit AM462_17155 PF00171 Aldehyde dehydrogenase family AM462_17160 PF04996 Succinylarginine dihydrolase AM462_17165 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM462_17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_17195 PF03466 LysR substrate binding domain AM462_17200 PF00892 EamA-like transporter family AM462_17220 PF05746 DALR anticodon binding domain AM462_17220 PF02092 Glycyl-tRNA synthetase beta subunit AM462_17225 PF02091 Glycyl-tRNA synthetase alpha subunit AM462_17230 PF07690 Major Facilitator Superfamily AM462_17245 PF00571 CBS domain AM462_17250 PF04024 PspC domain AM462_17270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_17270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_17270 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM462_17270 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_17280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM462_17280 PF01488 Shikimate / quinate 5-dehydrogenase AM462_17280 PF08501 Shikimate dehydrogenase substrate binding domain AM462_17285 PF01218 Coproporphyrinogen III oxidase AM462_17290 PF00925 GTP cyclohydrolase II AM462_17295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM462_17295 PF02780 Transketolase, C-terminal domain AM462_17295 PF02779 Transketolase, pyrimidine binding domain AM462_17300 PF00459 Inositol monophosphatase family AM462_17305 PF12343 Cold shock protein DEAD box A AM462_17305 PF00270 DEAD/DEAH box helicase AM462_17305 PF03880 DbpA RNA binding domain AM462_17305 PF00271 Helicase conserved C-terminal domain AM462_17310 PF00005 ABC transporter AM462_17315 PF02405 Permease MlaE AM462_17325 PF05494 MlaC protein AM462_17335 PF01544 CorA-like Mg2+ transporter protein AM462_17340 PF03641 Possible lysine decarboxylase AM462_17345 PF00293 NUDIX domain AM462_17350 PF00156 Phosphoribosyl transferase domain AM462_17355 PF17191 RecG wedge domain AM462_17355 PF00270 DEAD/DEAH box helicase AM462_17355 PF00271 Helicase conserved C-terminal domain AM462_17370 PF01553 Acyltransferase AM462_17380 PF00375 Sodium:dicarboxylate symporter family AM462_17390 PF01926 50S ribosome-binding GTPase AM462_17395 PF02082 Transcriptional regulator AM462_17400 PF00175 Oxidoreductase NAD-binding domain AM462_17400 PF00970 Oxidoreductase FAD-binding domain AM462_17400 PF00042 Globin AM462_17405 PF05872 Bacterial protein of unknown function (DUF853) AM462_17410 PF01053 Cys/Met metabolism PLP-dependent enzyme AM462_17415 PF00117 Glutamine amidotransferase class-I AM462_17420 PF00338 Ribosomal protein S10p/S20e AM462_17425 PF00297 Ribosomal protein L3 AM462_17430 PF00573 Ribosomal protein L4/L1 family AM462_17435 PF00276 Ribosomal protein L23 AM462_17440 PF03947 Ribosomal Proteins L2, C-terminal domain AM462_17440 PF00181 Ribosomal Proteins L2, RNA binding domain AM462_17445 PF00203 Ribosomal protein S19 AM462_17450 PF00237 Ribosomal protein L22p/L17e AM462_17455 PF07650 KH domain AM462_17455 PF00189 Ribosomal protein S3, C-terminal domain AM462_17460 PF00252 Ribosomal protein L16p/L10e AM462_17465 PF00831 Ribosomal L29 protein AM462_17470 PF00366 Ribosomal protein S17 AM462_17475 PF00238 Ribosomal protein L14p/L23e AM462_17480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM462_17480 PF00467 KOW motif AM462_17485 PF00281 Ribosomal protein L5 AM462_17485 PF00673 ribosomal L5P family C-terminus AM462_17490 PF00253 Ribosomal protein S14p/S29e AM462_17495 PF00410 Ribosomal protein S8 AM462_17500 PF00347 Ribosomal protein L6 AM462_17505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM462_17510 PF00333 Ribosomal protein S5, N-terminal domain AM462_17510 PF03719 Ribosomal protein S5, C-terminal domain AM462_17515 PF00327 Ribosomal protein L30p/L7e AM462_17520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM462_17525 PF00344 SecY translocase AM462_17530 PF00444 Ribosomal protein L36 AM462_17535 PF00416 Ribosomal protein S13/S18 AM462_17540 PF00411 Ribosomal protein S11 AM462_17545 PF01479 S4 domain AM462_17545 PF00163 Ribosomal protein S4/S9 N-terminal domain AM462_17550 PF01000 RNA polymerase Rpb3/RpoA insert domain AM462_17550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM462_17550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM462_17555 PF01196 Ribosomal protein L17 AM462_17560 PF00743 Flavin-binding monooxygenase-like AM462_17565 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_17565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_17565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_17570 PF03937 Flavinator of succinate dehydrogenase AM462_17600 PF09526 Probable metal-binding protein (DUF2387) AM462_17605 PF01432 Peptidase family M3 AM462_17610 PF08206 Ribonuclease B OB domain AM462_17610 PF00773 RNB domain AM462_17610 PF00575 S1 RNA binding domain AM462_17610 PF08461 Ribonuclease R winged-helix domain AM462_17610 PF17876 Cold shock domain AM462_17655 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM462_17660 PF12833 Helix-turn-helix domain AM462_17665 PF00892 EamA-like transporter family AM462_17670 PF03631 Virulence factor BrkB AM462_17675 PF03358 NADPH-dependent FMN reductase AM462_17700 PF02130 Uncharacterized protein family UPF0054 AM462_17705 PF02562 PhoH-like protein AM462_17710 PF00919 Uncharacterized protein family UPF0004 AM462_17710 PF04055 Radical SAM superfamily AM462_17710 PF01938 TRAM domain AM462_17715 PF10145 Phage-related minor tail protein AM462_17715 PF01551 Peptidase family M23 AM462_17715 PF01464 Transglycosylase SLT domain AM462_17725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM462_17725 PF00056 lactate/malate dehydrogenase, NAD binding domain AM462_17745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM462_17750 PF01066 CDP-alcohol phosphatidyltransferase AM462_17795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_17795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_17795 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_17800 PF17932 Tetracyclin repressor-like, C-terminal domain AM462_17800 PF00440 Bacterial regulatory proteins, tetR family AM462_17815 PF01039 Carboxyl transferase domain AM462_17820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_17820 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_17820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_17830 PF00289 Biotin carboxylase, N-terminal domain AM462_17830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_17830 PF00364 Biotin-requiring enzyme AM462_17830 PF02785 Biotin carboxylase C-terminal domain AM462_17840 PF04386 Stringent starvation protein B AM462_17845 PF13417 Glutathione S-transferase, N-terminal domain AM462_17845 PF00043 Glutathione S-transferase, C-terminal domain AM462_17850 PF00380 Ribosomal protein S9/S16 AM462_17855 PF00572 Ribosomal protein L13 AM462_17860 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM462_17865 PF00398 Ribosomal RNA adenine dimethylase AM462_17870 PF00149 Calcineurin-like phosphoesterase AM462_17890 PF13167 GTP-binding GTPase N-terminal AM462_17890 PF01926 50S ribosome-binding GTPase AM462_17890 PF16360 GTP-binding GTPase Middle Region AM462_17900 PF13091 PLD-like domain AM462_17905 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM462_17905 PF00149 Calcineurin-like phosphoesterase AM462_17910 PF01389 OmpA-like transmembrane domain AM462_17910 PF00691 OmpA family AM462_17915 PF00990 Diguanylate cyclase, GGDEF domain AM462_17915 PF17152 Periplasmic sensor domain AM462_17950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM462_17950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_17960 PF04273 Putative phosphatase (DUF442) AM462_17960 PF00753 Metallo-beta-lactamase superfamily AM462_17965 PF00561 alpha/beta hydrolase fold AM462_17970 PF00085 Thioredoxin AM462_17975 PF03061 Thioesterase superfamily AM462_17985 PF04461 Protein of unknown function (DUF520) AM462_17995 PF01266 FAD dependent oxidoreductase AM462_17995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM462_18005 PF03795 YCII-related domain AM462_18010 PF04279 Intracellular septation protein A AM462_18015 PF02811 PHP domain AM462_18020 PF01062 Bestrophin, RFP-TM, chloride channel AM462_18025 PF04002 RadC-like JAB domain AM462_18030 PF02441 Flavoprotein AM462_18030 PF04127 DNA / pantothenate metabolism flavoprotein AM462_18035 PF02355 Protein export membrane protein AM462_18035 PF07549 SecD/SecF GG Motif AM462_18040 PF02355 Protein export membrane protein AM462_18040 PF13721 SecD export protein N-terminal TM region AM462_18040 PF07549 SecD/SecF GG Motif AM462_18045 PF02699 Preprotein translocase subunit AM462_18050 PF01702 Queuine tRNA-ribosyltransferase AM462_18065 PF02547 Queuosine biosynthesis protein AM462_18075 PF00512 His Kinase A (phospho-acceptor) domain AM462_18075 PF07689 KaiB domain AM462_18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_18080 PF08335 GlnD PII-uridylyltransferase AM462_18080 PF03710 Glutamate-ammonia ligase adenylyltransferase AM462_18085 PF01063 Amino-transferase class IV AM462_18100 PF01522 Polysaccharide deacetylase AM462_18105 PF00535 Glycosyl transferase family 2 AM462_18110 PF13439 Glycosyltransferase Family 4 AM462_18110 PF00534 Glycosyl transferases group 1 AM462_18135 PF17102 Stealth protein CR3, conserved region 3 AM462_18135 PF17101 Stealth protein CR1, conserved region 1 AM462_18135 PF11380 Stealth protein CR2, conserved region 2 AM462_18140 PF02938 GAD domain AM462_18140 PF01336 OB-fold nucleic acid binding domain AM462_18140 PF00152 tRNA synthetases class II (D, K and N) AM462_18150 PF00593 TonB dependent receptor AM462_18150 PF07715 TonB-dependent Receptor Plug Domain AM462_18170 PF06146 Phosphate-starvation-inducible E AM462_18175 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_18175 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM462_18175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_18175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_18180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM462_18180 PF02770 Acyl-CoA dehydrogenase, middle domain AM462_18180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM462_18180 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM462_18190 PF00512 His Kinase A (phospho-acceptor) domain AM462_18190 PF00672 HAMP domain AM462_18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_18195 PF00072 Response regulator receiver domain AM462_18195 PF00486 Transcriptional regulatory protein, C terminal AM462_18200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM462_18220 PF01923 Cobalamin adenosyltransferase AM462_18225 PF00593 TonB dependent receptor AM462_18225 PF07715 TonB-dependent Receptor Plug Domain AM462_18230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM462_18235 PF00291 Pyridoxal-phosphate dependent enzyme AM462_18260 PF00290 Tryptophan synthase alpha chain AM462_18265 PF01039 Carboxyl transferase domain AM462_18270 PF08245 Mur ligase middle domain AM462_18270 PF02875 Mur ligase family, glutamate ligase domain AM462_18285 PF00753 Metallo-beta-lactamase superfamily AM462_18290 PF00578 AhpC/TSA family AM462_18290 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM462_18295 PF07517 SecA DEAD-like domain AM462_18295 PF02810 SEC-C motif AM462_18295 PF01043 SecA preprotein cross-linking domain AM462_18295 PF07516 SecA Wing and Scaffold domain AM462_18305 PF07690 Major Facilitator Superfamily AM462_18305 PF00083 Sugar (and other) transporter AM462_18310 PF03006 Haemolysin-III related AM462_18320 PF13673 Acetyltransferase (GNAT) domain AM462_18335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM462_18335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM462_18335 PF00378 Enoyl-CoA hydratase/isomerase AM462_18340 PF02803 Thiolase, C-terminal domain AM462_18340 PF00108 Thiolase, N-terminal domain AM462_18345 PF12833 Helix-turn-helix domain AM462_18345 PF02311 AraC-like ligand binding domain AM462_18350 PF02515 CoA-transferase family III AM462_18355 PF04966 Carbohydrate-selective porin, OprB family AM462_18360 PF01011 PQQ enzyme repeat AM462_18365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM462_18365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM462_18375 PF00893 Small Multidrug Resistance protein AM462_18395 PF00691 OmpA family AM462_18395 PF13505 Outer membrane protein beta-barrel domain AM462_18400 PF01139 tRNA-splicing ligase RtcB AM462_18405 PF00324 Amino acid permease AM462_18410 PF05175 Methyltransferase small domain AM462_18410 PF08468 Methyltransferase small domain N-terminal AM462_18415 PF00860 Permease family AM462_18425 PF01741 Large-conductance mechanosensitive channel, MscL AM462_18440 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM462_18440 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM462_18440 PF06827 Zinc finger found in FPG and IleRS AM462_18445 PF02245 Methylpurine-DNA glycosylase (MPG) AM462_18450 PF00593 TonB dependent receptor AM462_18450 PF07715 TonB-dependent Receptor Plug Domain AM462_18455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM462_18460 PF03547 Membrane transport protein AM462_18470 PF10411 Disulfide bond isomerase protein N-terminus AM462_18470 PF13098 Thioredoxin-like domain AM462_18475 PF01571 Aminomethyltransferase folate-binding domain AM462_18485 PF04343 Protein of unknown function, DUF488 AM462_18490 PF08274 PhnA Zinc-Ribbon AM462_18490 PF03831 PhnA domain AM462_18495 PF07411 Domain of unknown function (DUF1508) AM462_18500 PF04073 Aminoacyl-tRNA editing domain AM462_18500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM462_18500 PF03129 Anticodon binding domain AM462_18505 PF00873 AcrB/AcrD/AcrF family AM462_18520 PF00072 Response regulator receiver domain AM462_18525 PF00072 Response regulator receiver domain AM462_18530 PF01584 CheW-like domain AM462_18535 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM462_18535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM462_18540 PF01627 Hpt domain AM462_18540 PF01584 CheW-like domain AM462_18540 PF00072 Response regulator receiver domain AM462_18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_18550 PF04055 Radical SAM superfamily AM462_18550 PF06969 HemN C-terminal domain AM462_18560 PF13936 Helix-turn-helix domain AM462_18560 PF00665 Integrase core domain AM462_18570 PF07687 Peptidase dimerisation domain AM462_18570 PF01546 Peptidase family M20/M25/M40 AM462_18575 PF08085 Entericidin EcnA/B family AM462_18585 PF04304 Protein of unknown function (DUF454) AM462_18590 PF17969 L,D-transpeptidase C-terminal domain AM462_18590 PF03734 L,D-transpeptidase catalytic domain AM462_18630 PF00258 Flavodoxin AM462_18630 PF00175 Oxidoreductase NAD-binding domain AM462_18630 PF00667 FAD binding domain AM462_18640 PF12805 FUSC-like inner membrane protein yccS AM462_18645 PF07690 Major Facilitator Superfamily AM462_18650 PF00881 Nitroreductase family AM462_18665 PF01235 Sodium:alanine symporter family AM462_18670 PF01734 Patatin-like phospholipase AM462_18675 PF00291 Pyridoxal-phosphate dependent enzyme AM462_18675 PF13291 ACT domain AM462_18680 PF05992 SbmA/BacA-like family AM462_18705 PF02934 GatB/GatE catalytic domain AM462_18705 PF02637 GatB domain AM462_18710 PF01425 Amidase AM462_18715 PF02686 Glu-tRNAGln amidotransferase C subunit AM462_18725 PF04085 rod shape-determining protein MreC AM462_18730 PF04093 rod shape-determining protein MreD AM462_18735 PF02545 Maf-like protein AM462_18740 PF00575 S1 RNA binding domain AM462_18740 PF10150 Ribonuclease E/G family AM462_18750 PF06974 Protein of unknown function (DUF1298) AM462_18750 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AM462_18755 PF01507 Phosphoadenosine phosphosulfate reductase family AM462_18770 PF02525 Flavodoxin-like fold AM462_18790 PF02673 Bacitracin resistance protein BacA AM462_18795 PF06719 AraC-type transcriptional regulator N-terminus AM462_18795 PF12833 Helix-turn-helix domain AM462_18800 PF09277 Erythronolide synthase, docking AM462_18800 PF14765 Polyketide synthase dehydratase AM462_18800 PF08659 KR domain AM462_18800 PF00550 Phosphopantetheine attachment site AM462_18800 PF00109 Beta-ketoacyl synthase, N-terminal domain AM462_18800 PF00698 Acyl transferase domain AM462_18800 PF16197 Ketoacyl-synthetase C-terminal extension AM462_18800 PF08240 Alcohol dehydrogenase GroES-like domain AM462_18800 PF08990 Erythronolide synthase docking AM462_18800 PF02801 Beta-ketoacyl synthase, C-terminal domain AM462_18805 PF01965 DJ-1/PfpI family AM462_18850 PF00717 Peptidase S24-like AM462_18850 PF01726 LexA DNA binding domain AM462_18855 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AM462_18885 PF03796 DnaB-like helicase C terminal domain AM462_18885 PF00772 DnaB-like helicase N terminal domain AM462_18910 PF05866 Endodeoxyribonuclease RusA AM462_18965 PF03354 Phage Terminase AM462_18970 PF04860 Phage portal protein AM462_18975 PF00574 Clp protease AM462_19030 PF01551 Peptidase family M23 AM462_19030 PF10145 Phage-related minor tail protein AM462_19030 PF01464 Transglycosylase SLT domain AM462_19090 PF00324 Amino acid permease AM462_19095 PF04303 PrpF protein AM462_19100 PF00348 Polyprenyl synthetase AM462_19105 PF04237 YjbR AM462_19110 PF01145 SPFH domain / Band 7 family AM462_19120 PF01734 Patatin-like phospholipase AM462_19140 PF00884 Sulfatase AM462_19140 PF08019 Phosphoethanolamine transferase EptA/EptB AM462_19145 PF00072 Response regulator receiver domain AM462_19145 PF00486 Transcriptional regulatory protein, C terminal AM462_19150 PF00512 His Kinase A (phospho-acceptor) domain AM462_19150 PF08521 Two-component sensor kinase N-terminal AM462_19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM462_19160 PF00909 Ammonium Transporter Family AM462_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_19170 PF03466 LysR substrate binding domain AM462_19190 PF08264 Anticodon-binding domain of tRNA AM462_19190 PF00133 tRNA synthetases class I (I, L, M and V) AM462_19190 PF10458 Valyl tRNA synthetase tRNA binding arm AM462_19210 PF01906 Putative heavy-metal-binding AM462_19215 PF01906 Putative heavy-metal-binding AM462_19220 PF02321 Outer membrane efflux protein AM462_19225 PF00873 AcrB/AcrD/AcrF family AM462_19230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM462_19230 PF00529 HlyD membrane-fusion protein of T1SS AM462_19235 PF01569 PAP2 superfamily AM462_19245 PF00348 Polyprenyl synthetase AM462_19255 PF00829 Ribosomal prokaryotic L21 protein AM462_19260 PF01016 Ribosomal L27 protein AM462_19265 PF03548 Outer membrane lipoprotein carrier protein LolA AM462_19275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM462_19275 PF02403 Seryl-tRNA synthetase N-terminal domain AM462_19280 PF14824 Sirohaem biosynthesis protein central AM462_19280 PF10414 Sirohaem synthase dimerisation region AM462_19280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM462_19285 PF00588 SpoU rRNA Methylase family AM462_19290 PF01638 HxlR-like helix-turn-helix AM462_19295 PF03358 NADPH-dependent FMN reductase AM462_19300 PF13520 Amino acid permease AM462_19305 PF00465 Iron-containing alcohol dehydrogenase AM462_19315 PF03099 Biotin/lipoate A/B protein ligase family AM462_19320 PF04359 Protein of unknown function (DUF493) AM462_19325 PF03979 Sigma-70 factor, region 1.1 AM462_19325 PF00140 Sigma-70 factor, region 1.2 AM462_19325 PF04545 Sigma-70, region 4 AM462_19325 PF04542 Sigma-70 region 2 AM462_19325 PF04539 Sigma-70 region 3 AM462_19325 PF04546 Sigma-70, non-essential region AM462_19350 PF00285 Citrate synthase, C-terminal domain AM462_19355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM462_19360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM462_19365 PF02910 Fumarate reductase flavoprotein C-term AM462_19365 PF00890 FAD binding domain AM462_19370 PF13085 2Fe-2S iron-sulfur cluster binding domain AM462_19385 PF00676 Dehydrogenase E1 component AM462_19385 PF16870 2-oxoglutarate dehydrogenase C-terminal AM462_19385 PF02779 Transketolase, pyrimidine binding domain AM462_19385 PF16078 2-oxoglutarate dehydrogenase N-terminus AM462_19390 PF02817 e3 binding domain AM462_19390 PF00364 Biotin-requiring enzyme AM462_19390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM462_19395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM462_19395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM462_19400 PF00549 CoA-ligase AM462_19400 PF08442 ATP-grasp domain AM462_19405 PF02629 CoA binding domain AM462_19405 PF00549 CoA-ligase AM462_19420 PF00579 tRNA synthetases class I (W and Y) AM462_19425 PF05661 Protein of unknown function (DUF808) AM462_19430 PF04228 Putative neutral zinc metallopeptidase AM462_19435 PF00999 Sodium/hydrogen exchanger family AM462_19450 PF09587 Bacterial capsule synthesis protein PGA_cap AM462_19460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM462_19465 PF00582 Universal stress protein family AM462_19470 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_19475 PF01272 Transcription elongation factor, GreA/GreB, C-term AM462_19475 PF03449 Transcription elongation factor, N-terminal AM462_19480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM462_19480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM462_19480 PF02142 MGS-like domain AM462_19485 PF00117 Glutamine amidotransferase class-I AM462_19485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM462_19500 PF01985 CRS1 / YhbY (CRM) domain AM462_19505 PF01728 FtsJ-like methyltransferase AM462_19510 PF06480 FtsH Extracellular AM462_19510 PF00004 ATPase family associated with various cellular activities (AAA) AM462_19510 PF01434 Peptidase family M41 AM462_19510 PF17862 AAA+ lid domain AM462_19515 PF00809 Pterin binding enzyme AM462_19535 PF16655 PhoD-like phosphatase, N-terminal domain AM462_19535 PF09423 PhoD-like phosphatase AM462_19550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM462_19550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM462_19565 PF00083 Sugar (and other) transporter AM462_19570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM462_19570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM462_19575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM462_19575 PF01266 FAD dependent oxidoreductase AM462_19580 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM462_19580 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM462_19585 PF00781 Diacylglycerol kinase catalytic domain AM462_19590 PF00149 Calcineurin-like phosphoesterase AM462_19600 PF00166 Chaperonin 10 Kd subunit AM462_19605 PF00118 TCP-1/cpn60 chaperonin family AM462_19610 PF01219 Prokaryotic diacylglycerol kinase AM462_19615 PF00753 Metallo-beta-lactamase superfamily AM462_19620 PF03009 Glycerophosphoryl diester phosphodiesterase family AM462_19625 PF00873 AcrB/AcrD/AcrF family AM462_19635 PF01435 Peptidase family M48 AM462_19640 PF01464 Transglycosylase SLT domain AM462_19650 PF01171 PP-loop family AM462_19660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM462_19660 PF01464 Transglycosylase SLT domain AM462_19665 PF01272 Transcription elongation factor, GreA/GreB, C-term AM462_19665 PF03449 Transcription elongation factor, N-terminal AM462_19680 PF00501 AMP-binding enzyme AM462_19680 PF00668 Condensation domain AM462_19680 PF13193 AMP-binding enzyme C-terminal domain AM462_19680 PF00975 Thioesterase domain AM462_19680 PF00550 Phosphopantetheine attachment site AM462_19720 PF00881 Nitroreductase family AM462_19735 PF02595 Glycerate kinase family AM462_19740 PF00384 Molybdopterin oxidoreductase AM462_19745 PF02634 FdhD/NarQ family AM462_19750 PF06803 Protein of unknown function (DUF1232) AM462_19755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM462_19755 PF11890 Domain of unknown function (DUF3410) AM462_19755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM462_19760 PF00152 tRNA synthetases class II (D, K and N) AM462_19770 PF18073 Rubredoxin metal binding domain AM462_19775 PF00324 Amino acid permease AM462_19785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM462_19785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM462_19790 PF01678 Diaminopimelate epimerase AM462_19795 PF00561 alpha/beta hydrolase fold AM462_19800 PF01810 LysE type translocator AM462_19805 PF02899 Phage integrase, N-terminal SAM-like domain AM462_19805 PF00589 Phage integrase family AM462_19810 PF01012 Electron transfer flavoprotein domain AM462_19815 PF00766 Electron transfer flavoprotein FAD-binding domain AM462_19815 PF01012 Electron transfer flavoprotein domain AM462_19820 PF00521 DNA gyrase/topoisomerase IV, subunit A AM462_19820 PF03989 DNA gyrase C-terminal domain, beta-propeller AM462_19835 PF00535 Glycosyl transferase family 2 AM462_19855 PF13533 Biotin-lipoyl like AM462_19865 PF00266 Aminotransferase class-V AM462_19880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM462_19890 PF02687 FtsX-like permease family AM462_19890 PF12704 MacB-like periplasmic core domain AM462_19895 PF00005 ABC transporter AM462_19900 PF03772 Competence protein AM462_19900 PF13567 Domain of unknown function (DUF4131) AM462_19900 PF00753 Metallo-beta-lactamase superfamily AM462_19910 PF06965 Na+/H+ antiporter 1 AM462_19910 PF01343 Peptidase family S49 AM462_19915 PF12697 Alpha/beta hydrolase family AM462_19920 PF00551 Formyl transferase AM462_19925 PF02769 AIR synthase related protein, C-terminal domain AM462_19925 PF00586 AIR synthase related protein, N-terminal domain AM462_19930 PF01594 AI-2E family transporter AM462_19935 PF00308 Bacterial dnaA protein AM462_19935 PF11638 DnaA N-terminal domain AM462_19935 PF08299 Bacterial dnaA protein helix-turn-helix AM462_19970 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM462_19970 PF00588 SpoU rRNA Methylase family AM462_19975 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM462_19985 PF00691 OmpA family AM462_19990 PF07676 WD40-like Beta Propeller Repeat AM462_19990 PF04052 TolB amino-terminal domain AM462_20000 PF02472 Biopolymer transport protein ExbD/TolR AM462_20005 PF01618 MotA/TolQ/ExbB proton channel family AM462_20010 PF03061 Thioesterase superfamily AM462_20015 PF07687 Peptidase dimerisation domain AM462_20015 PF01546 Peptidase family M20/M25/M40 AM462_20020 PF05491 RuvB C-terminal winged helix domain AM462_20020 PF17864 RuvB AAA lid domain AM462_20020 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM462_20025 PF01330 RuvA N terminal domain AM462_20025 PF07499 RuvA, C-terminal domain AM462_20030 PF01966 HD domain AM462_20035 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM462_20035 PF02769 AIR synthase related protein, C-terminal domain AM462_20035 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM462_20040 PF07690 Major Facilitator Superfamily AM462_20045 PF01784 NIF3 (NGG1p interacting factor 3) AM462_20050 PF00378 Enoyl-CoA hydratase/isomerase AM462_20055 PF00293 NUDIX domain AM462_20055 PF01467 Cytidylyltransferase-like AM462_20065 PF00578 AhpC/TSA family AM462_20080 PF06508 Queuosine biosynthesis protein QueC AM462_20090 PF00132 Bacterial transferase hexapeptide (six repeats) AM462_20090 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM462_20090 PF14602 Hexapeptide repeat of succinyl-transferase AM462_20100 PF03466 LysR substrate binding domain AM462_20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM462_20105 PF00005 ABC transporter AM462_20105 PF12857 TOBE-like domain AM462_20110 PF00528 Binding-protein-dependent transport system inner membrane component AM462_20115 PF00528 Binding-protein-dependent transport system inner membrane component AM462_20130 PF01063 Amino-transferase class IV AM462_20135 PF02618 YceG-like family AM462_20140 PF02223 Thymidylate kinase AM462_20150 PF00890 FAD binding domain AM462_20150 PF02910 Fumarate reductase flavoprotein C-term AM462_20155 PF13180 PDZ domain AM462_20165 PF03144 Elongation factor Tu domain 2 AM462_20165 PF00679 Elongation factor G C-terminus AM462_20165 PF00009 Elongation factor Tu GTP binding domain AM462_20165 PF06421 GTP-binding protein LepA C-terminus AM462_20170 PF10502 Signal peptidase, peptidase S26 AM462_20180 PF14622 Ribonuclease-III-like AM462_20180 PF00035 Double-stranded RNA binding motif AM462_20185 PF07650 KH domain AM462_20185 PF01926 50S ribosome-binding GTPase AM462_20195 PF11967 Recombination protein O N terminal AM462_20195 PF02565 Recombination protein O C terminal AM462_20200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM462_20205 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM462_20210 PF00106 short chain dehydrogenase AM462_20250 PF17151 Periplasmic sensor domain AM462_20250 PF00990 Diguanylate cyclase, GGDEF domain AM462_20260 PF17757 UvrB interaction domain AM462_20260 PF12344 Ultra-violet resistance protein B AM462_20260 PF02151 UvrB/uvrC motif AM462_20260 PF04851 Type III restriction enzyme, res subunit AM462_20260 PF00271 Helicase conserved C-terminal domain AM462_20270 PF00892 EamA-like transporter family AM462_20275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM462_20275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM462_20290 PF01018 GTP1/OBG AM462_20290 PF01926 50S ribosome-binding GTPase AM462_20295 PF01472 PUA domain AM462_20295 PF00696 Amino acid kinase family AM462_20305 PF07759 Protein of unknown function (DUF1615) AM462_20310 PF01207 Dihydrouridine synthase (Dus) AM462_20315 PF00593 TonB dependent receptor AM462_20315 PF07715 TonB-dependent Receptor Plug Domain