AM480_00005 PF03389 MobA/MobL family AM480_00035 PF04365 Protein of unknown function (DUF497) AM480_00040 PF14384 AM480_00040 AM480_00045 PF00593 TonB dependent receptor AM480_00045 PF07715 TonB-dependent Receptor Plug Domain AM480_00085 PF04610 AM480_00085 AM480_00105 PF05939 AM480_00105 AM480_00110 PF07927 YcfA-like protein AM480_00115 PF15970 AM480_00115 AM480_00120 PF01464 Transglycosylase SLT domain AM480_00130 PF16459 AM480_00130 AM480_00135 PF16460 AM480_00135 AM480_00140 PF11367 Protein of unknown function (DUF3168) AM480_00145 PF04883 AM480_00145 AM480_00150 PF05521 Phage head-tail joining protein AM480_00165 PF05065 Phage capsid family AM480_00170 PF00574 Clp protease AM480_00180 PF04860 Phage portal protein AM480_00190 PF03354 AM480_00190 AM480_00215 PF03592 Terminase small subunit AM480_00220 PF01844 HNH endonuclease AM480_00230 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM480_00265 PF01844 HNH endonuclease AM480_00285 PF01555 DNA methylase AM480_00290 PF00772 DnaB-like helicase N terminal domain AM480_00290 PF03796 DnaB-like helicase C terminal domain AM480_00295 PF00392 Bacterial regulatory proteins, gntR family AM480_00305 PF01381 Helix-turn-helix AM480_00310 PF00717 Peptidase S24-like AM480_00310 PF01381 Helix-turn-helix AM480_00355 PF03837 AM480_00355 AM480_00360 PF09588 YqaJ-like viral recombinase domain AM480_00380 PF12728 Helix-turn-helix domain AM480_00385 PF00589 Phage integrase family AM480_00385 PF13356 Domain of unknown function (DUF4102) AM480_00390 PF00005 ABC transporter AM480_00395 PF01061 AM480_00395 AM480_00400 PF14489 QueF-like protein AM480_00400 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM480_00410 PF01098 AM480_00410 AM480_00415 PF13406 Transglycosylase SLT domain AM480_00420 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AM480_00425 PF06127 AM480_00425 AM480_00430 PF05437 AM480_00430 AM480_00435 PF03591 AM480_00435 AM480_00440 PF02311 AraC-like ligand binding domain AM480_00440 PF12833 Helix-turn-helix domain AM480_00445 PF11948 AM480_00445 AM480_00450 PF00889 Elongation factor TS AM480_00455 PF00318 Ribosomal protein S2 AM480_00460 PF00557 Metallopeptidase family M24 AM480_00465 PF03922 OmpW family AM480_00470 PF07690 Major Facilitator Superfamily AM480_00475 PF07690 Major Facilitator Superfamily AM480_00480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM480_00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_00485 PF04055 Radical SAM superfamily AM480_00485 PF16881 AM480_00485 AM480_00490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_00490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_00490 PF09317 AM480_00490 AM480_00495 PF02627 Carboxymuconolactone decarboxylase family AM480_00500 PF03412 Peptidase C39 family AM480_00505 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM480_00505 PF05221 S-adenosyl-L-homocysteine hydrolase AM480_00510 PF02219 Methylenetetrahydrofolate reductase AM480_00515 PF04452 RNA methyltransferase AM480_00520 PF00563 EAL domain AM480_00520 PF00989 PAS fold AM480_00520 PF00990 GGDEF domain AM480_00520 PF08447 PAS fold AM480_00525 PF00390 Malic enzyme, N-terminal domain AM480_00525 PF01515 Phosphate acetyl/butaryl transferase AM480_00525 PF03949 Malic enzyme, NAD binding domain AM480_00530 PF01743 Poly A polymerase head domain AM480_00530 PF12627 Probable RNA and SrmB- binding site of polymerase A AM480_00535 PF13180 PDZ domain AM480_00535 PF13365 Trypsin-like peptidase domain AM480_00540 PF01784 NIF3 (NGG1p interacting factor 3) AM480_00545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM480_00545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM480_00565 PF10881 AM480_00565 AM480_00575 PF03583 Secretory lipase AM480_00580 PF01040 UbiA prenyltransferase family AM480_00585 PF04345 Chorismate lyase AM480_00590 PF00120 Glutamine synthetase, catalytic domain AM480_00590 PF03951 Glutamine synthetase, beta-Grasp domain AM480_00595 PF00854 POT family AM480_00600 PF00557 Metallopeptidase family M24 AM480_00600 PF01321 Creatinase/Prolidase N-terminal domain AM480_00600 PF16188 AM480_00600 AM480_00600 PF16189 AM480_00600 AM480_00605 PF00117 Glutamine amidotransferase class-I AM480_00610 PF01433 Peptidase family M1 AM480_00610 PF11838 ERAP1-like C-terminal domain AM480_00615 PF00593 TonB dependent receptor AM480_00615 PF07715 TonB-dependent Receptor Plug Domain AM480_00625 PF00591 Glycosyl transferase family, a/b domain AM480_00625 PF02885 Glycosyl transferase family, helical bundle domain AM480_00630 PF00218 Indole-3-glycerol phosphate synthase AM480_00635 PF01713 Smr domain AM480_00640 PF02625 XdhC and CoxI family AM480_00640 PF13478 XdhC Rossmann domain AM480_00645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM480_00645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM480_00650 PF00941 FAD binding domain in molybdopterin dehydrogenase AM480_00650 PF01799 [2Fe-2S] binding domain AM480_00650 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM480_00655 PF01227 GTP cyclohydrolase I AM480_00665 PF00144 Beta-lactamase AM480_00670 PF13387 AM480_00670 AM480_00675 PF11220 AM480_00675 AM480_00680 PF05675 AM480_00680 AM480_00685 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM480_00690 PF01471 Putative peptidoglycan binding domain AM480_00690 PF03734 L,D-transpeptidase catalytic domain AM480_00695 PF00425 chorismate binding enzyme AM480_00700 PF01648 4'-phosphopantetheinyl transferase superfamily AM480_00705 PF00975 Thioesterase domain AM480_00710 PF00005 ABC transporter AM480_00710 PF00664 ABC transporter transmembrane region AM480_00715 PF00005 ABC transporter AM480_00715 PF00664 ABC transporter transmembrane region AM480_00725 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM480_00730 PF00550 Phosphopantetheine attachment site AM480_00730 PF00857 Isochorismatase family AM480_00735 PF00501 AMP-binding enzyme AM480_00735 PF13193 AMP-binding enzyme C-terminal domain AM480_00740 PF00668 Condensation domain AM480_00745 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM480_00750 PF00593 TonB dependent receptor AM480_00750 PF07715 TonB-dependent Receptor Plug Domain AM480_00755 PF01497 Periplasmic binding protein AM480_00760 PF00005 ABC transporter AM480_00765 PF01032 FecCD transport family AM480_00770 PF01032 FecCD transport family AM480_00775 PF00550 Phosphopantetheine attachment site AM480_00775 PF00668 Condensation domain AM480_00780 PF00501 AMP-binding enzyme AM480_00780 PF13193 AMP-binding enzyme C-terminal domain AM480_00785 PF04954 Siderophore-interacting protein AM480_00785 PF08021 Siderophore-interacting FAD-binding domain AM480_00790 PF08348 AM480_00790 AM480_00790 PF13309 AM480_00790 AM480_00795 PF00291 Pyridoxal-phosphate dependent enzyme AM480_00800 PF02678 Pirin AM480_00805 PF00440 Bacterial regulatory proteins, tetR family AM480_00815 PF03453 MoeA N-terminal region (domain I and II) AM480_00825 PF04328 AM480_00825 AM480_00830 PF02554 AM480_00830 AM480_00830 PF13722 AM480_00830 AM480_00835 PF01132 Elongation factor P (EF-P) OB domain AM480_00835 PF08207 Elongation factor P (EF-P) KOW-like domain AM480_00835 PF09285 Elongation factor P, C-terminal AM480_00840 PF04055 Radical SAM superfamily AM480_00840 PF13394 4Fe-4S single cluster domain AM480_00850 PF00563 EAL domain AM480_00855 PF01197 Ribosomal protein L31 AM480_00860 PF13593 SBF-like CPA transporter family (DUF4137) AM480_00865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM480_00870 PF07690 Major Facilitator Superfamily AM480_00875 PF05362 Lon protease (S16) C-terminal proteolytic domain AM480_00875 PF13654 AAA domain AM480_00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_00880 PF03466 LysR substrate binding domain AM480_00885 PF01476 LysM domain AM480_00885 PF01551 Peptidase family M23 AM480_00890 PF01975 Survival protein SurE AM480_00905 PF00768 D-alanyl-D-alanine carboxypeptidase AM480_00905 PF07943 Penicillin-binding protein 5, C-terminal domain AM480_00910 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_00915 PF00293 NUDIX domain AM480_00920 PF03054 tRNA methyl transferase AM480_00925 PF04356 Protein of unknown function (DUF489) AM480_00930 PF00206 Lyase AM480_00930 PF08328 Adenylosuccinate lyase C-terminal AM480_00935 PF09997 AM480_00935 AM480_00950 PF01343 Peptidase family S49 AM480_00950 PF08496 AM480_00950 AM480_00955 PF00005 ABC transporter AM480_00960 PF00528 Binding-protein-dependent transport system inner membrane component AM480_00960 PF11812 AM480_00960 AM480_00965 PF00528 Binding-protein-dependent transport system inner membrane component AM480_00965 PF12501 AM480_00965 AM480_00970 PF12849 PBP superfamily domain AM480_00975 PF00324 Amino acid permease AM480_00980 PF00205 Thiamine pyrophosphate enzyme, central domain AM480_00980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM480_00980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM480_00985 PF01037 AsnC family AM480_00985 PF13404 AsnC-type helix-turn-helix domain AM480_00990 PF00171 Aldehyde dehydrogenase family AM480_00995 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM480_01000 PF00202 Aminotransferase class-III AM480_01005 PF04402 Protein of unknown function (DUF541) AM480_01010 PF00440 Bacterial regulatory proteins, tetR family AM480_01015 PF14539 Domain of unknown function (DUF4442) AM480_01020 PF00487 AM480_01020 AM480_01025 PF00175 Oxidoreductase NAD-binding domain AM480_01025 PF00970 Oxidoreductase FAD-binding domain AM480_01030 PF00440 Bacterial regulatory proteins, tetR family AM480_01035 PF01594 AM480_01035 AM480_01040 PF00176 SNF2 family N-terminal domain AM480_01040 PF00271 Helicase conserved C-terminal domain AM480_01040 PF12137 RNA polymerase recycling family C-terminal AM480_01045 PF00849 RNA pseudouridylate synthase AM480_01055 PF00202 Aminotransferase class-III AM480_01060 PF02581 Thiamine monophosphate synthase/TENI AM480_01065 PF06127 AM480_01065 AM480_01070 PF01928 CYTH domain AM480_01070 PF05235 CHAD domain AM480_01080 PF11342 Protein of unknown function (DUF3144) AM480_01085 PF00675 Insulinase (Peptidase family M16) AM480_01085 PF05193 Peptidase M16 inactive domain AM480_01090 PF02567 Phenazine biosynthesis-like protein AM480_01095 PF00375 Sodium:dicarboxylate symporter family AM480_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_01100 PF03466 LysR substrate binding domain AM480_01105 PF06779 AM480_01105 AM480_01125 PF00180 Isocitrate/isopropylmalate dehydrogenase AM480_01130 PF00849 RNA pseudouridylate synthase AM480_01135 PF03971 Monomeric isocitrate dehydrogenase AM480_01140 PF05299 M61 glycyl aminopeptidase AM480_01145 PF00768 D-alanyl-D-alanine carboxypeptidase AM480_01150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_01155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_01160 PF00875 DNA photolyase AM480_01160 PF03441 FAD binding domain of DNA photolyase AM480_01175 PF13641 Glycosyltransferase like family 2 AM480_01190 PF02350 UDP-N-acetylglucosamine 2-epimerase AM480_01200 PF01988 AM480_01200 AM480_01205 PF03060 Nitronate monooxygenase AM480_01210 PF01207 Dihydrouridine synthase (Dus) AM480_01215 PF07759 AM480_01215 AM480_01220 PF12710 haloacid dehalogenase-like hydrolase AM480_01225 PF00696 Amino acid kinase family AM480_01225 PF01472 PUA domain AM480_01230 PF01018 GTP1/OBG AM480_01230 PF01926 50S ribosome-binding GTPase AM480_01245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM480_01245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM480_01250 PF00892 EamA-like transporter family AM480_01255 PF08212 Lipocalin-like domain AM480_01260 PF00271 Helicase conserved C-terminal domain AM480_01260 PF02151 UvrB/uvrC motif AM480_01260 PF04851 Type III restriction enzyme, res subunit AM480_01260 PF12344 Ultra-violet resistance protein B AM480_01270 PF00990 GGDEF domain AM480_01270 PF13188 PAS domain AM480_01270 PF13426 PAS domain AM480_01280 PF00155 Aminotransferase class I and II AM480_01285 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_01290 PF03061 Thioesterase superfamily AM480_01310 PF00106 short chain dehydrogenase AM480_01315 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM480_01320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM480_01325 PF02565 Recombination protein O C terminal AM480_01325 PF11967 Recombination protein O N terminal AM480_01335 PF01926 50S ribosome-binding GTPase AM480_01335 PF07650 KH domain AM480_01340 PF00035 Double-stranded RNA binding motif AM480_01340 PF14622 Ribonuclease-III-like AM480_01345 PF16137 AM480_01345 AM480_01350 PF00717 Peptidase S24-like AM480_01350 PF10502 Signal peptidase, peptidase S26 AM480_01355 PF00009 Elongation factor Tu GTP binding domain AM480_01355 PF00679 Elongation factor G C-terminus AM480_01355 PF03144 Elongation factor Tu domain 2 AM480_01355 PF06421 GTP-binding protein LepA C-terminus AM480_01360 PF13279 Thioesterase-like superfamily AM480_01365 PF13180 PDZ domain AM480_01365 PF13365 Trypsin-like peptidase domain AM480_01370 PF00890 FAD binding domain AM480_01370 PF02910 Fumarate reductase flavoprotein C-term AM480_01375 PF03061 Thioesterase superfamily AM480_01380 PF02223 Thymidylate kinase AM480_01385 PF02618 YceG-like family AM480_01390 PF01063 Aminotransferase class IV AM480_01395 PF13531 Bacterial extracellular solute-binding protein AM480_01400 PF06821 Serine hydrolase AM480_01405 PF00528 Binding-protein-dependent transport system inner membrane component AM480_01410 PF00528 Binding-protein-dependent transport system inner membrane component AM480_01415 PF00005 ABC transporter AM480_01415 PF12857 AM480_01415 AM480_01420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_01420 PF03466 LysR substrate binding domain AM480_01430 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_01430 PF14602 Hexapeptide repeat of succinyl-transferase AM480_01430 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM480_01435 PF04055 Radical SAM superfamily AM480_01435 PF13394 4Fe-4S single cluster domain AM480_01440 PF06508 Queuosine biosynthesis protein QueC AM480_01450 PF01902 ATP-binding region AM480_01455 PF00578 AhpC/TSA family AM480_01460 PF00188 Cysteine-rich secretory protein family AM480_01465 PF01467 Cytidylyltransferase AM480_01470 PF00378 Enoyl-CoA hydratase/isomerase family AM480_01480 PF07690 Major Facilitator Superfamily AM480_01485 PF02769 AIR synthase related protein, C-terminal domain AM480_01485 PF13507 CobB/CobQ-like glutamine amidotransferase domain AM480_01490 PF01966 HD domain AM480_01495 PF01330 RuvA N terminal domain AM480_01495 PF07499 RuvA, C-terminal domain AM480_01495 PF14520 Helix-hairpin-helix domain AM480_01500 PF05491 Holliday junction DNA helicase ruvB C-terminus AM480_01500 PF05496 Holliday junction DNA helicase ruvB N-terminus AM480_01505 PF01546 Peptidase family M20/M25/M40 AM480_01505 PF07687 Peptidase dimerisation domain AM480_01510 PF03061 Thioesterase superfamily AM480_01515 PF01618 AM480_01515 AM480_01520 PF02472 Biopolymer transport protein ExbD/TolR AM480_01525 PF13103 TonB C terminal AM480_01530 PF04052 TolB amino-terminal domain AM480_01530 PF07676 WD40-like Beta Propeller Repeat AM480_01535 PF00691 OmpA family AM480_01545 PF00316 Fructose-1-6-bisphosphatase AM480_01550 PF00588 SpoU rRNA Methylase family AM480_01555 PF04542 Sigma-70 region 2 AM480_01555 PF08281 Sigma-70, region 4 AM480_01565 PF11304 AM480_01565 AM480_01580 PF00308 Bacterial dnaA protein AM480_01585 PF01594 AM480_01585 AM480_01590 PF00586 AIR synthase related protein, N-terminal domain AM480_01590 PF02769 AIR synthase related protein, C-terminal domain AM480_01595 PF00551 Formyl transferase AM480_01600 PF12697 Alpha/beta hydrolase family AM480_01605 PF01343 Peptidase family S49 AM480_01610 PF03279 AM480_01610 AM480_01615 PF00753 Metallo-beta-lactamase superfamily AM480_01615 PF03772 AM480_01615 AM480_01615 PF13567 AM480_01615 AM480_01620 PF00005 ABC transporter AM480_01625 PF02687 AM480_01625 AM480_01625 PF12704 MacB-like periplasmic core domain AM480_01630 PF00892 EamA-like transporter family AM480_01635 PF02639 AM480_01635 AM480_01645 PF00266 Aminotransferase class-V AM480_01650 PF02321 Outer membrane efflux protein AM480_01655 PF16576 AM480_01655 AM480_01660 PF12698 ABC-2 family transporter protein AM480_01665 PF12698 ABC-2 family transporter protein AM480_01670 PF04794 YdjC-like protein AM480_01675 PF00535 Glycosyl transferase family 2 AM480_01680 PF04138 AM480_01680 AM480_01685 PF13231 AM480_01685 AM480_01690 PF00521 DNA gyrase/topoisomerase IV, subunit A AM480_01690 PF03989 DNA gyrase C-terminal domain, beta-propeller AM480_01695 PF00766 Electron transfer flavoprotein FAD-binding domain AM480_01695 PF01012 Electron transfer flavoprotein domain AM480_01700 PF01012 Electron transfer flavoprotein domain AM480_01705 PF00589 Phage integrase family AM480_01705 PF02899 Phage integrase, N-terminal SAM-like domain AM480_01710 PF01810 AM480_01710 AM480_01715 PF01678 Diaminopimelate epimerase AM480_01720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM480_01720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM480_01730 PF00324 Amino acid permease AM480_01735 PF06745 KaiC AM480_01735 PF13541 Subunit ChlI of Mg-chelatase AM480_01740 PF04280 Tim44-like domain AM480_01745 PF00152 tRNA synthetases class II (D, K and N) AM480_01750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM480_01750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM480_01750 PF11890 Domain of unknown function (DUF3410) AM480_01755 PF06803 AM480_01755 AM480_01760 PF02634 FdhD/NarQ family AM480_01765 PF00384 Molybdopterin oxidoreductase AM480_01765 PF01568 Molydopterin dinucleotide binding domain AM480_01770 PF02595 Glycerate kinase family AM480_01775 PF00440 Bacterial regulatory proteins, tetR family AM480_01780 PF00106 short chain dehydrogenase AM480_01785 PF00881 Nitroreductase family AM480_01790 PF00440 Bacterial regulatory proteins, tetR family AM480_01795 PF10118 AM480_01795 AM480_01800 PF00440 Bacterial regulatory proteins, tetR family AM480_01815 PF11042 AM480_01815 AM480_01820 PF06877 Regulator of ribonuclease activity B AM480_01835 PF09857 AM480_01835 AM480_01840 PF13527 Acetyltransferase (GNAT) domain AM480_01845 PF00501 AMP-binding enzyme AM480_01845 PF00550 Phosphopantetheine attachment site AM480_01845 PF13193 AMP-binding enzyme C-terminal domain AM480_01850 PF14534 Domain of unknown function (DUF4440) AM480_01860 PF01272 Transcription elongation factor, GreA/GreB, C-term AM480_01860 PF03449 Transcription elongation factor, N-terminal AM480_01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM480_01865 PF01464 Transglycosylase SLT domain AM480_01870 PF02036 SCP-2 sterol transfer family AM480_01875 PF01171 PP-loop family AM480_01885 PF01464 Transglycosylase SLT domain AM480_01890 PF01435 Peptidase family M48 AM480_01895 PF13430 AM480_01895 AM480_01900 PF00873 AcrB/AcrD/AcrF family AM480_01905 PF03009 Glycerophosphoryl diester phosphodiesterase family AM480_01910 PF00753 Metallo-beta-lactamase superfamily AM480_01915 PF01219 Prokaryotic diacylglycerol kinase AM480_01920 PF00118 TCP-1/cpn60 chaperonin family AM480_01925 PF00166 Chaperonin 10 Kd subunit AM480_01930 PF12245 Bacterial Ig-like domain (group 3) AM480_01935 PF00149 Calcineurin-like phosphoesterase AM480_01940 PF00781 Diacylglycerol kinase catalytic domain AM480_01945 PF00821 Phosphoenolpyruvate carboxykinase AM480_01945 PF17297 AM480_01945 AM480_01950 PF01266 FAD dependent oxidoreductase AM480_01950 PF16901 AM480_01950 AM480_01955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM480_01955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM480_01960 PF00083 Sugar (and other) transporter AM480_01970 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AM480_01975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM480_01975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM480_01990 PF09423 PhoD-like phosphatase AM480_01990 PF16655 AM480_01990 AM480_02010 PF00809 Pterin binding enzyme AM480_02015 PF00004 ATPase family associated with various cellular activities (AAA) AM480_02015 PF01434 Peptidase family M41 AM480_02015 PF06480 FtsH Extracellular AM480_02020 PF01728 FtsJ-like methyltransferase AM480_02025 PF01985 CRS1 / YhbY (CRM) domain AM480_02040 PF00117 Glutamine amidotransferase class-I AM480_02040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM480_02045 PF02142 MGS-like domain AM480_02045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_02045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM480_02050 PF01272 Transcription elongation factor, GreA/GreB, C-term AM480_02050 PF03449 Transcription elongation factor, N-terminal AM480_02055 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_02060 PF00582 Universal stress protein family AM480_02065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM480_02075 PF09587 Bacterial capsule synthesis protein PGA_cap AM480_02090 PF00999 Sodium/hydrogen exchanger family AM480_02095 PF04228 AM480_02095 AM480_02100 PF05661 AM480_02100 AM480_02105 PF00579 tRNA synthetases class I (W and Y) AM480_02110 PF00549 CoA-ligase AM480_02110 PF02629 CoA binding domain AM480_02115 PF00549 CoA-ligase AM480_02115 PF08442 ATP-grasp domain AM480_02120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM480_02120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_02125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM480_02125 PF00364 Biotin-requiring enzyme AM480_02125 PF02817 e3 binding domain AM480_02130 PF00676 Dehydrogenase E1 component AM480_02130 PF02779 Transketolase, pyrimidine binding domain AM480_02130 PF16078 AM480_02130 AM480_02130 PF16870 AM480_02130 AM480_02145 PF13085 2Fe-2S iron-sulfur cluster binding domain AM480_02145 PF13534 4Fe-4S dicluster domain AM480_02150 PF00890 FAD binding domain AM480_02150 PF02910 Fumarate reductase flavoprotein C-term AM480_02155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM480_02160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM480_02165 PF00285 Citrate synthase AM480_02170 PF06945 AM480_02170 AM480_02175 PF00581 Rhodanese-like domain AM480_02180 PF03695 Uncharacterised protein family (UPF0149) AM480_02190 PF00140 Sigma-70 factor, region 1 AM480_02190 PF03979 Sigma-70 factor, region 1 AM480_02190 PF04539 Sigma-70 region 3 AM480_02190 PF04542 Sigma-70 region 2 AM480_02190 PF04545 Sigma-70, region 4 AM480_02190 PF04546 Sigma-70, non-essential region AM480_02195 PF04359 Protein of unknown function (DUF493) AM480_02200 PF03099 Biotin/lipoate A/B protein ligase family AM480_02210 PF00465 Iron-containing alcohol dehydrogenase AM480_02215 PF00324 Amino acid permease AM480_02220 PF12724 Flavodoxin domain AM480_02225 PF01638 HxlR-like helix-turn-helix AM480_02230 PF00588 SpoU rRNA Methylase family AM480_02235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM480_02235 PF10414 Sirohaem synthase dimerisation region AM480_02235 PF13241 Putative NAD(P)-binding AM480_02240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM480_02240 PF02403 Seryl-tRNA synthetase N-terminal domain AM480_02245 PF11738 Protein of unknown function (DUF3298) AM480_02250 PF03548 Outer membrane lipoprotein carrier protein LolA AM480_02255 PF01016 Ribosomal L27 protein AM480_02260 PF00829 Ribosomal prokaryotic L21 protein AM480_02270 PF00348 Polyprenyl synthetase AM480_02275 PF10136 AM480_02275 AM480_02280 PF01569 PAP2 superfamily AM480_02285 PF00529 HlyD family secretion protein AM480_02285 PF16576 AM480_02285 AM480_02290 PF00873 AcrB/AcrD/AcrF family AM480_02295 PF02321 Outer membrane efflux protein AM480_02300 PF01906 Putative heavy-metal-binding AM480_02305 PF01906 Putative heavy-metal-binding AM480_02310 PF13577 SnoaL-like domain AM480_02315 PF00106 short chain dehydrogenase AM480_02325 PF00133 tRNA synthetases class I (I, L, M and V) AM480_02325 PF08264 Anticodon-binding domain of tRNA AM480_02325 PF10458 Valyl tRNA synthetase tRNA binding arm AM480_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_02345 PF03466 LysR substrate binding domain AM480_02355 PF00909 Ammonium Transporter Family AM480_02360 PF01569 PAP2 superfamily AM480_02365 PF00512 His Kinase A (phospho-acceptor) domain AM480_02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_02370 PF00072 Response regulator receiver domain AM480_02370 PF00486 Transcriptional regulatory protein, C terminal AM480_02375 PF00884 Sulfatase AM480_02375 PF08019 AM480_02375 AM480_02380 PF02530 AM480_02380 AM480_02385 PF13000 AM480_02385 AM480_02390 PF01553 Acyltransferase AM480_02395 PF01734 Patatin-like phospholipase AM480_02400 PF01957 NfeD-like C-terminal, partner-binding AM480_02405 PF01145 SPFH domain / Band 7 family AM480_02410 PF04237 YjbR AM480_02415 PF00348 Polyprenyl synthetase AM480_02420 PF04303 PrpF protein AM480_02425 PF00324 Amino acid permease AM480_02435 PF00589 Phage integrase family AM480_02435 PF13356 Domain of unknown function (DUF4102) AM480_02445 PF00959 Phage lysozyme AM480_02465 PF03906 AM480_02465 AM480_02465 PF13088 BNR repeat-like domain AM480_02525 PF00583 Acetyltransferase (GNAT) family AM480_02535 PF17212 AM480_02535 AM480_02555 PF12236 Bacteriophage head to tail connecting protein AM480_02600 PF05866 Endodeoxyribonuclease RusA AM480_02615 PF00772 DnaB-like helicase N terminal domain AM480_02615 PF03796 DnaB-like helicase C terminal domain AM480_02620 PF04492 AM480_02620 AM480_02635 PF14549 DNA-binding transcriptional regulator Cro AM480_02640 PF00717 Peptidase S24-like AM480_02640 PF01381 Helix-turn-helix AM480_02685 PF05930 Prophage CP4-57 regulatory protein (AlpA) AM480_02690 PF01965 DJ-1/PfpI family AM480_02695 PF00107 Zinc-binding dehydrogenase AM480_02695 PF08240 Alcohol dehydrogenase GroES-like domain AM480_02700 PF06719 AM480_02700 AM480_02700 PF12833 Helix-turn-helix domain AM480_02705 PF02673 AM480_02705 AM480_02710 PF08223 PaaX-like protein C-terminal domain AM480_02715 PF00487 AM480_02715 AM480_02720 PF12625 AM480_02720 AM480_02720 PF12833 Helix-turn-helix domain AM480_02725 PF02525 Flavodoxin-like fold AM480_02730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM480_02735 PF12710 haloacid dehalogenase-like hydrolase AM480_02740 PF01507 Phosphoadenosine phosphosulfate reductase family AM480_02745 PF03007 AM480_02745 AM480_02745 PF06974 AM480_02745 AM480_02755 PF00575 S1 RNA binding domain AM480_02755 PF10150 Ribonuclease E/G family AM480_02760 PF02545 Maf-like protein AM480_02765 PF04093 AM480_02765 AM480_02770 PF04085 rod shape-determining protein MreC AM480_02775 PF06723 MreB/Mbl protein AM480_02780 PF02686 Glu-tRNAGln amidotransferase C subunit AM480_02785 PF01425 Amidase AM480_02790 PF02637 GatB domain AM480_02790 PF02934 GatB/GatE catalytic domain AM480_02795 PF01965 DJ-1/PfpI family AM480_02805 PF06674 AM480_02805 AM480_02810 PF16142 AM480_02810 AM480_02815 PF01431 Peptidase family M13 AM480_02815 PF05649 Peptidase family M13 AM480_02820 PF05992 AM480_02820 AM480_02825 PF00291 Pyridoxal-phosphate dependent enzyme AM480_02830 PF01734 Patatin-like phospholipase AM480_02835 PF01235 AM480_02835 AM480_02850 PF00881 Nitroreductase family AM480_02855 PF07690 Major Facilitator Superfamily AM480_02860 PF12805 AM480_02860 AM480_02860 PF13515 AM480_02860 AM480_02865 PF14317 AM480_02865 AM480_02870 PF00175 Oxidoreductase NAD-binding domain AM480_02870 PF00258 Flavodoxin AM480_02870 PF03929 AM480_02870 AM480_02875 PF02698 DUF218 domain AM480_02910 PF03734 L,D-transpeptidase catalytic domain AM480_02915 PF04304 AM480_02915 AM480_02920 PF08907 AM480_02920 AM480_02925 PF08085 AM480_02925 AM480_02930 PF01546 Peptidase family M20/M25/M40 AM480_02930 PF07687 Peptidase dimerisation domain AM480_02940 PF00072 Response regulator receiver domain AM480_02940 PF01584 CheW-like domain AM480_02940 PF01627 Hpt domain AM480_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_02945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM480_02950 PF01584 CheW-like domain AM480_02955 PF00072 Response regulator receiver domain AM480_02960 PF00072 Response regulator receiver domain AM480_02970 PF13437 HlyD family secretion protein AM480_02970 PF13533 Biotin-lipoyl like AM480_02975 PF00873 AcrB/AcrD/AcrF family AM480_02980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM480_02980 PF03129 Anticodon binding domain AM480_02980 PF04073 Aminoacyl-tRNA editing domain AM480_02985 PF07411 Domain of unknown function (DUF1508) AM480_02990 PF03831 PhnA protein AM480_02990 PF08274 PhnA Zinc-Ribbon AM480_02995 PF04343 AM480_02995 AM480_03000 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AM480_03005 PF01571 Aminomethyltransferase folate-binding domain AM480_03010 PF10411 Disulfide bond isomerase protein N-terminus AM480_03010 PF13098 Thioredoxin-like domain AM480_03015 PF08238 Sel1 repeat AM480_03020 PF03547 AM480_03020 AM480_03025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM480_03030 PF00593 TonB dependent receptor AM480_03030 PF07715 TonB-dependent Receptor Plug Domain AM480_03035 PF02245 Methylpurine-DNA glycosylase (MPG) AM480_03040 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM480_03040 PF06827 Zinc finger found in FPG and IleRS AM480_03040 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM480_03045 PF00639 PPIC-type PPIASE domain AM480_03050 PF06094 AIG2-like family AM480_03055 PF01741 Large-conductance mechanosensitive channel, MscL AM480_03060 PF00009 Elongation factor Tu GTP binding domain AM480_03060 PF00679 Elongation factor G C-terminus AM480_03060 PF03144 Elongation factor Tu domain 2 AM480_03065 PF00860 Permease family AM480_03070 PF05175 Methyltransferase small domain AM480_03070 PF08468 Methyltransferase small domain N-terminal AM480_03075 PF00324 Amino acid permease AM480_03080 PF01139 tRNA-splicing ligase RtcB AM480_03085 PF00691 OmpA family AM480_03085 PF13505 Outer membrane protein beta-barrel domain AM480_03090 PF12019 Type II transport protein GspH AM480_03095 PF00108 Thiolase, N-terminal domain AM480_03095 PF02803 Thiolase, C-terminal domain AM480_03100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM480_03105 PF00893 Small Multidrug Resistance protein AM480_03110 PF06073 AM480_03110 AM480_03115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM480_03115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM480_03120 PF01011 PQQ enzyme repeat AM480_03120 PF13360 PQQ-like domain AM480_03125 PF04966 Carbohydrate-selective porin, OprB family AM480_03130 PF02515 CoA-transferase family III AM480_03135 PF12625 AM480_03135 AM480_03135 PF12833 Helix-turn-helix domain AM480_03140 PF00108 Thiolase, N-terminal domain AM480_03140 PF02803 Thiolase, C-terminal domain AM480_03145 PF00378 Enoyl-CoA hydratase/isomerase family AM480_03145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM480_03145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM480_03155 PF01734 Patatin-like phospholipase AM480_03160 PF13673 Acetyltransferase (GNAT) domain AM480_03165 PF13679 AM480_03165 AM480_03170 PF03006 AM480_03170 AM480_03175 PF00083 Sugar (and other) transporter AM480_03185 PF01043 SecA preprotein cross-linking domain AM480_03185 PF02810 SEC-C motif AM480_03185 PF07516 SecA Wing and Scaffold domain AM480_03185 PF07517 SecA DEAD-like domain AM480_03190 PF00578 AhpC/TSA family AM480_03190 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM480_03195 PF00753 Metallo-beta-lactamase superfamily AM480_03200 PF00782 Dual specificity phosphatase, catalytic domain AM480_03205 PF05036 Sporulation related domain AM480_03210 PF02875 Mur ligase family, glutamate ligase domain AM480_03210 PF08245 Mur ligase middle domain AM480_03215 PF01039 Carboxyl transferase domain AM480_03220 PF00290 Tryptophan synthase alpha chain AM480_03225 PF12625 AM480_03225 AM480_03225 PF12833 Helix-turn-helix domain AM480_03230 PF10118 AM480_03230 AM480_03235 PF10974 AM480_03235 AM480_03240 PF07566 Domain of Unknown Function (DUF1543) AM480_03245 PF00291 Pyridoxal-phosphate dependent enzyme AM480_03250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM480_03255 PF00593 TonB dependent receptor AM480_03255 PF07715 TonB-dependent Receptor Plug Domain AM480_03260 PF01923 Cobalamin adenosyltransferase AM480_03265 PF03009 Glycerophosphoryl diester phosphodiesterase family AM480_03270 PF03724 META domain AM480_03275 PF00487 AM480_03275 AM480_03280 PF02696 AM480_03280 AM480_03285 PF00072 Response regulator receiver domain AM480_03285 PF00486 Transcriptional regulatory protein, C terminal AM480_03290 PF00512 His Kinase A (phospho-acceptor) domain AM480_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_03300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_03300 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_03300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_03300 PF12418 AM480_03300 AM480_03300 PF12806 AM480_03300 AM480_03305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_03305 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_03305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_03305 PF12418 AM480_03305 AM480_03305 PF12806 AM480_03305 AM480_03310 PF06146 AM480_03310 AM480_03315 PF11776 Domain of unknown function (DUF3315) AM480_03325 PF13091 PLD-like domain AM480_03330 PF00593 TonB dependent receptor AM480_03330 PF07715 TonB-dependent Receptor Plug Domain AM480_03335 PF13803 AM480_03335 AM480_03340 PF00152 tRNA synthetases class II (D, K and N) AM480_03340 PF01336 OB-fold nucleic acid binding domain AM480_03340 PF02938 GAD domain AM480_03345 PF11380 AM480_03345 AM480_03345 PF17102 AM480_03345 AM480_03355 PF03275 UDP-galactopyranose mutase AM480_03355 PF13450 NAD(P)-binding Rossmann-like domain AM480_03380 PF01755 AM480_03380 AM480_03390 PF00534 Glycosyl transferases group 1 AM480_03390 PF13439 Glycosyltransferase Family 4 AM480_03395 PF00535 Glycosyl transferase family 2 AM480_03400 PF01522 Polysaccharide deacetylase AM480_03405 PF13524 Glycosyl transferases group 1 AM480_03410 PF06258 AM480_03410 AM480_03415 PF01063 Aminotransferase class IV AM480_03420 PF03710 Glutamate-ammonia ligase adenylyltransferase AM480_03420 PF08335 GlnD PII-uridylyltransferase AM480_03425 PF00512 His Kinase A (phospho-acceptor) domain AM480_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_03445 PF04245 AM480_03445 AM480_03460 PF02547 Queuosine biosynthesis protein AM480_03470 PF04011 LemA family AM480_03475 PF01702 Queuine tRNA-ribosyltransferase AM480_03480 PF02699 Preprotein translocase subunit AM480_03485 PF02355 Protein export membrane protein AM480_03485 PF07549 SecD/SecF GG Motif AM480_03485 PF13721 SecD export protein N-terminal TM region AM480_03490 PF02355 Protein export membrane protein AM480_03490 PF07549 SecD/SecF GG Motif AM480_03495 PF02441 Flavoprotein AM480_03495 PF04127 DNA / pantothenate metabolism flavoprotein AM480_03500 PF04002 RadC-like JAB domain AM480_03505 PF01062 AM480_03505 AM480_03510 PF02811 PHP domain AM480_03515 PF04279 AM480_03515 AM480_03520 PF03795 YCII-related domain AM480_03530 PF01266 FAD dependent oxidoreductase AM480_03530 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM480_03535 PF00581 Rhodanese-like domain AM480_03540 PF04461 Protein of unknown function (DUF520) AM480_03545 PF14539 Domain of unknown function (DUF4442) AM480_03550 PF03061 Thioesterase superfamily AM480_03555 PF00085 Thioredoxin AM480_03560 PF12146 Putative lysophospholipase AM480_03565 PF04273 Putative phosphatase (DUF442) AM480_03575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM480_03575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_03605 PF13689 AM480_03605 AM480_03610 PF00990 GGDEF domain AM480_03610 PF17152 AM480_03610 AM480_03615 PF00691 OmpA family AM480_03620 PF00149 Calcineurin-like phosphoesterase AM480_03625 PF13091 PLD-like domain AM480_03630 PF01553 Acyltransferase AM480_03635 PF01926 50S ribosome-binding GTPase AM480_03635 PF13167 AM480_03635 AM480_03635 PF16360 AM480_03635 AM480_03645 PF04172 AM480_03645 AM480_03650 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AM480_03655 PF00149 Calcineurin-like phosphoesterase AM480_03660 PF00398 Ribosomal RNA adenine dimethylase AM480_03665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM480_03670 PF00572 Ribosomal protein L13 AM480_03675 PF00380 Ribosomal protein S9/S16 AM480_03680 PF02798 Glutathione S-transferase, N-terminal domain AM480_03685 PF04386 Stringent starvation protein B AM480_03695 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM480_03695 PF00364 Biotin-requiring enzyme AM480_03695 PF02785 Biotin carboxylase C-terminal domain AM480_03695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_03700 PF00378 Enoyl-CoA hydratase/isomerase family AM480_03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_03705 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_03705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_03710 PF01039 Carboxyl transferase domain AM480_03715 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_03720 PF07287 AM480_03720 AM480_03725 PF00440 Bacterial regulatory proteins, tetR family AM480_03730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_03730 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_03730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_03735 PF14066 AM480_03735 AM480_03740 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_03780 PF01066 CDP-alcohol phosphatidyltransferase AM480_03785 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AM480_03790 PF13640 2OG-Fe(II) oxygenase superfamily AM480_03800 PF10982 Protein of unknown function (DUF2789) AM480_03805 PF00056 lactate/malate dehydrogenase, NAD binding domain AM480_03805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM480_03810 PF00445 Ribonuclease T2 family AM480_03815 PF01464 Transglycosylase SLT domain AM480_03820 PF00919 Uncharacterized protein family UPF0004 AM480_03820 PF01938 TRAM domain AM480_03820 PF04055 Radical SAM superfamily AM480_03825 PF02562 PhoH-like protein AM480_03830 PF02130 Uncharacterized protein family UPF0054 AM480_03835 PF03544 Gram-negative bacterial TonB protein C-terminal AM480_03845 PF11306 Protein of unknown function (DUF3108) AM480_03855 PF03358 NADPH-dependent FMN reductase AM480_03860 PF03631 AM480_03860 AM480_03865 PF00892 EamA-like transporter family AM480_03875 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_03885 PF00881 Nitroreductase family AM480_03900 PF12710 haloacid dehalogenase-like hydrolase AM480_03920 PF00575 S1 RNA binding domain AM480_03920 PF00773 RNB domain AM480_03920 PF08206 Ribonuclease B OB domain AM480_03925 PF01432 Peptidase family M3 AM480_03930 PF09526 AM480_03930 AM480_03945 PF01694 Rhomboid family AM480_03960 PF03937 Flavinator of succinate dehydrogenase AM480_03965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_03965 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_03965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_03970 PF00743 Flavin-binding monooxygenase-like AM480_03970 PF13450 NAD(P)-binding Rossmann-like domain AM480_03975 PF01196 Ribosomal protein L17 AM480_03980 PF01000 RNA polymerase Rpb3/RpoA insert domain AM480_03980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM480_03980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM480_03985 PF00163 Ribosomal protein S4/S9 N-terminal domain AM480_03985 PF01479 S4 domain AM480_03990 PF00411 Ribosomal protein S11 AM480_03995 PF00416 Ribosomal protein S13/S18 AM480_04000 PF00444 Ribosomal protein L36 AM480_04005 PF00344 SecY translocase AM480_04010 PF00828 Ribosomal protein L18e/L15 AM480_04015 PF00327 Ribosomal protein L30p/L7e AM480_04020 PF00333 Ribosomal protein S5, N-terminal domain AM480_04020 PF03719 Ribosomal protein S5, C-terminal domain AM480_04025 PF00861 Ribosomal L18p/L5e family AM480_04030 PF00347 Ribosomal protein L6 AM480_04035 PF00410 Ribosomal protein S8 AM480_04040 PF00253 Ribosomal protein S14p/S29e AM480_04045 PF00281 Ribosomal protein L5 AM480_04045 PF00673 ribosomal L5P family C-terminus AM480_04050 PF00467 KOW motif AM480_04050 PF17136 AM480_04050 AM480_04055 PF00238 Ribosomal protein L14p/L23e AM480_04060 PF00366 Ribosomal protein S17 AM480_04065 PF00831 Ribosomal L29 protein AM480_04070 PF00252 Ribosomal protein L16p/L10e AM480_04075 PF00189 Ribosomal protein S3, C-terminal domain AM480_04075 PF07650 KH domain AM480_04080 PF00237 Ribosomal protein L22p/L17e AM480_04085 PF00203 Ribosomal protein S19 AM480_04090 PF00181 Ribosomal Proteins L2, RNA binding domain AM480_04090 PF03947 Ribosomal Proteins L2, C-terminal domain AM480_04095 PF00276 Ribosomal protein L23 AM480_04100 PF00573 Ribosomal protein L4/L1 family AM480_04105 PF00297 Ribosomal protein L3 AM480_04110 PF00338 Ribosomal protein S10p/S20e AM480_04115 PF00117 Glutamine amidotransferase class-I AM480_04120 PF01053 Cys/Met metabolism PLP-dependent enzyme AM480_04125 PF05872 AM480_04125 AM480_04135 PF00042 Globin AM480_04140 PF02082 Transcriptional regulator AM480_04145 PF01926 50S ribosome-binding GTPase AM480_04150 PF10118 AM480_04150 AM480_04155 PF00375 Sodium:dicarboxylate symporter family AM480_04160 PF13622 Thioesterase-like superfamily AM480_04165 PF01553 Acyltransferase AM480_04175 PF13460 NADH(P)-binding AM480_04180 PF00270 DEAD/DEAH box helicase AM480_04180 PF00271 Helicase conserved C-terminal domain AM480_04180 PF17191 AM480_04180 AM480_04185 PF00156 Phosphoribosyl transferase domain AM480_04190 PF00293 NUDIX domain AM480_04195 PF03641 Possible lysine decarboxylase AM480_04200 PF01544 CorA-like Mg2+ transporter protein AM480_04205 PF13466 STAS domain AM480_04210 PF05494 Toluene tolerance, Ttg2 AM480_04215 PF02470 AM480_04215 AM480_04220 PF02405 AM480_04220 AM480_04225 PF00005 ABC transporter AM480_04230 PF00270 DEAD/DEAH box helicase AM480_04230 PF00271 Helicase conserved C-terminal domain AM480_04235 PF00459 Inositol monophosphatase family AM480_04240 PF02779 Transketolase, pyrimidine binding domain AM480_04240 PF02780 Transketolase, C-terminal domain AM480_04240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM480_04245 PF00925 GTP cyclohydrolase II AM480_04250 PF01218 Coproporphyrinogen III oxidase AM480_04255 PF01488 Shikimate / quinate 5-dehydrogenase AM480_04255 PF08501 Shikimate dehydrogenase substrate binding domain AM480_04265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_04265 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_04265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_04265 PF12418 AM480_04265 AM480_04265 PF12806 AM480_04265 AM480_04275 PF04024 AM480_04275 AM480_04280 PF00571 CBS domain AM480_04280 PF04982 AM480_04280 AM480_04285 PF13566 AM480_04285 AM480_04295 PF07007 Protein of unknown function (DUF1311) AM480_04305 PF02091 Glycyl-tRNA synthetase alpha subunit AM480_04310 PF02092 AM480_04310 AM480_04310 PF05746 DALR anticodon binding domain AM480_04315 PF13304 AAA domain AM480_04325 PF03795 YCII-related domain AM480_04330 PF00892 EamA-like transporter family AM480_04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_04335 PF03466 LysR substrate binding domain AM480_04350 PF00082 Subtilase family AM480_04365 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM480_04370 PF04996 Succinylarginine dihydrolase AM480_04375 PF00171 Aldehyde dehydrogenase family AM480_04380 PF04958 Arginine N-succinyltransferase beta subunit AM480_04385 PF00202 Aminotransferase class-III AM480_04390 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM480_04390 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM480_04395 PF00324 Amino acid permease AM480_04405 PF08241 Methyltransferase domain AM480_04420 PF10107 AM480_04420 AM480_04425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM480_04430 PF01594 AM480_04430 AM480_04435 PF00080 Copper/zinc superoxide dismutase (SODC) AM480_04440 PF12805 AM480_04440 AM480_04440 PF13515 AM480_04440 AM480_04445 PF07690 Major Facilitator Superfamily AM480_04455 PF02525 Flavodoxin-like fold AM480_04460 PF03992 Antibiotic biosynthesis monooxygenase AM480_04470 PF14253 AM480_04470 AM480_04475 PF01565 FAD binding domain AM480_04475 PF02913 FAD linked oxidases, C-terminal domain AM480_04480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM480_04480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM480_04485 PF00892 EamA-like transporter family AM480_04490 PF00892 EamA-like transporter family AM480_04495 PF01814 Hemerythrin HHE cation binding domain AM480_04500 PF01925 AM480_04500 AM480_04505 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM480_04505 PF09157 Pseudouridine synthase II TruB, C-terminal AM480_04505 PF16198 AM480_04505 AM480_04510 PF03280 Proteobacterial lipase chaperone protein AM480_04515 PF00561 alpha/beta hydrolase fold AM480_04520 PF01245 Ribosomal protein L19 AM480_04525 PF01746 tRNA (Guanine-1)-methyltransferase AM480_04530 PF01782 RimM N-terminal domain AM480_04530 PF05239 PRC-barrel domain AM480_04535 PF00886 Ribosomal protein S16 AM480_04540 PF07963 Prokaryotic N-terminal methylation motif AM480_04540 PF16732 AM480_04540 AM480_04545 PF07963 Prokaryotic N-terminal methylation motif AM480_04545 PF16732 AM480_04545 AM480_04550 PF05567 Neisseria PilC beta-propeller domain AM480_04550 PF13519 von Willebrand factor type A domain AM480_04560 PF07963 Prokaryotic N-terminal methylation motif AM480_04560 PF16074 AM480_04560 AM480_04565 PF07963 Prokaryotic N-terminal methylation motif AM480_04570 PF07963 Prokaryotic N-terminal methylation motif AM480_04570 PF12019 Type II transport protein GspH AM480_04575 PF02401 LytB protein AM480_04580 PF00625 Guanylate kinase AM480_04585 PF01192 RNA polymerase Rpb6 AM480_04595 PF02824 TGS domain AM480_04595 PF13328 HD domain AM480_04600 PF01042 Endoribonuclease L-PSP AM480_04605 PF04324 BFD-like [2Fe-2S] binding domain AM480_04610 PF00210 Ferritin-like domain AM480_04615 PF04932 AM480_04615 AM480_04615 PF11846 AM480_04615 AM480_04615 PF15864 AM480_04615 AM480_04620 PF00114 Pilin (bacterial filament) AM480_04620 PF07963 Prokaryotic N-terminal methylation motif AM480_04625 PF04536 TLP18 AM480_04630 PF04536 TLP18 AM480_04635 PF04011 LemA family AM480_04640 PF10118 AM480_04640 AM480_04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_04645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM480_04650 PF00310 Glutamine amidotransferases class-II AM480_04650 PF01493 GXGXG motif AM480_04650 PF01645 Conserved region in glutamate synthase AM480_04650 PF04898 Glutamate synthase central domain AM480_04660 PF01761 3-dehydroquinate synthase AM480_04665 PF01202 Shikimate kinase AM480_04670 PF00263 AM480_04670 AM480_04670 PF03958 Bacterial type II/III secretion system short domain AM480_04670 PF07660 Secretin and TonB N terminus short domain AM480_04670 PF11741 AMIN domain AM480_04675 PF04351 Pilus assembly protein, PilP AM480_04680 PF04350 Pilus assembly protein, PilO AM480_04685 PF05137 AM480_04685 AM480_04690 PF11104 Type IV pilus assembly protein PilM; AM480_04695 PF00905 Penicillin binding protein transpeptidase domain AM480_04695 PF00912 Transglycosylase AM480_04695 PF17092 AM480_04695 AM480_04700 PF08241 Methyltransferase domain AM480_04710 PF00953 Glycosyl transferase family 4 AM480_04715 PF01225 Mur ligase family, catalytic domain AM480_04715 PF02875 Mur ligase family, glutamate ligase domain AM480_04715 PF08245 Mur ligase middle domain AM480_04720 PF02875 Mur ligase family, glutamate ligase domain AM480_04720 PF08245 Mur ligase middle domain AM480_04725 PF00905 Penicillin binding protein transpeptidase domain AM480_04725 PF03717 Penicillin-binding Protein dimerisation domain AM480_04730 PF04999 AM480_04730 AM480_04735 PF01795 MraW methylase family AM480_04740 PF13531 Bacterial extracellular solute-binding protein AM480_04750 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM480_04765 PF00324 Amino acid permease AM480_04795 PF01545 Cation efflux family AM480_04800 PF00873 AcrB/AcrD/AcrF family AM480_04805 PF16576 AM480_04805 AM480_04810 PF02321 Outer membrane efflux protein AM480_04825 PF04191 Phospholipid methyltransferase AM480_04845 PF08238 Sel1 repeat AM480_04850 PF00005 ABC transporter AM480_04850 PF12848 ABC transporter AM480_04855 PF01053 Cys/Met metabolism PLP-dependent enzyme AM480_04860 PF00106 short chain dehydrogenase AM480_04865 PF00484 Carbonic anhydrase AM480_04865 PF00916 AM480_04865 AM480_04870 PF00575 S1 RNA binding domain AM480_04870 PF09371 Tex-like protein N-terminal domain AM480_04870 PF12836 Helix-hairpin-helix motif AM480_04870 PF16921 AM480_04870 AM480_04875 PF00072 Response regulator receiver domain AM480_04875 PF00486 Transcriptional regulatory protein, C terminal AM480_04880 PF00512 His Kinase A (phospho-acceptor) domain AM480_04880 PF00672 HAMP domain AM480_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_04890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM480_04890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM480_04895 PF00583 Acetyltransferase (GNAT) family AM480_04910 PF12568 Acetyltransferase (GNAT) domain AM480_04915 PF00475 Imidazoleglycerol-phosphate dehydratase AM480_04920 PF00117 Glutamine amidotransferase class-I AM480_04925 PF05656 AM480_04925 AM480_04930 PF01612 3'-5' exonuclease AM480_04935 PF00977 Histidine biosynthesis protein AM480_04940 PF01381 Helix-turn-helix AM480_04940 PF07883 Cupin domain AM480_04945 PF00892 EamA-like transporter family AM480_04950 PF03992 Antibiotic biosynthesis monooxygenase AM480_04960 PF00313 'Cold-shock' DNA-binding domain AM480_04960 PF06961 AM480_04960 AM480_04965 PF01636 Phosphotransferase enzyme family AM480_04970 PF00977 Histidine biosynthesis protein AM480_04980 PF12625 AM480_04980 AM480_04980 PF12833 Helix-turn-helix domain AM480_04985 PF00230 Major intrinsic protein AM480_04995 PF01810 AM480_04995 AM480_05000 PF01223 DNA/RNA non-specific endonuclease AM480_05010 PF02705 AM480_05010 AM480_05030 PF00809 Pterin binding enzyme AM480_05035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM480_05050 PF13610 AM480_05050 AM480_05055 PF13523 Acetyltransferase (GNAT) domain AM480_05065 PF04986 AM480_05065 AM480_05065 PF14319 AM480_05065 AM480_05070 PF13610 AM480_05070 AM480_05075 PF01610 AM480_05075 AM480_05075 PF13542 AM480_05075 AM480_05080 PF07690 Major Facilitator Superfamily AM480_05090 PF01443 Viral (Superfamily 1) RNA helicase AM480_05090 PF03389 MobA/MobL family AM480_05090 PF13604 AAA domain AM480_05095 PF06412 AM480_05095 AM480_05110 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM480_05115 PF01636 Phosphotransferase enzyme family AM480_05130 PF02525 Flavodoxin-like fold AM480_05140 PF01638 HxlR-like helix-turn-helix AM480_05160 PF08238 Sel1 repeat AM480_05165 PF00440 Bacterial regulatory proteins, tetR family AM480_05170 PF12833 Helix-turn-helix domain AM480_05175 PF00248 Aldo/keto reductase family AM480_05190 PF00892 EamA-like transporter family AM480_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_05195 PF03466 LysR substrate binding domain AM480_05200 PF07690 Major Facilitator Superfamily AM480_05210 PF00324 Amino acid permease AM480_05215 PF00171 Aldehyde dehydrogenase family AM480_05220 PF05899 Protein of unknown function (DUF861) AM480_05225 PF01266 FAD dependent oxidoreductase AM480_05230 PF07905 AM480_05230 AM480_05230 PF13556 PucR C-terminal helix-turn-helix domain AM480_05235 PF12625 AM480_05235 AM480_05235 PF12833 Helix-turn-helix domain AM480_05245 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_05250 PF13489 Methyltransferase domain AM480_05260 PF00665 Integrase core domain AM480_05260 PF13936 Helix-turn-helix domain AM480_05270 PF02678 Pirin AM480_05270 PF05726 Pirin C-terminal cupin domain AM480_05275 PF00857 Isochorismatase family AM480_05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_05280 PF03466 LysR substrate binding domain AM480_05285 PF00171 Aldehyde dehydrogenase family AM480_05290 PF00202 Aminotransferase class-III AM480_05295 PF00155 Aminotransferase class I and II AM480_05295 PF00392 Bacterial regulatory proteins, gntR family AM480_05300 PF00324 Amino acid permease AM480_05305 PF01381 Helix-turn-helix AM480_05305 PF07883 Cupin domain AM480_05310 PF03591 AM480_05310 AM480_05315 PF05437 AM480_05315 AM480_05320 PF00436 Single-strand binding protein family AM480_05325 PF07690 Major Facilitator Superfamily AM480_05330 PF04332 AM480_05330 AM480_05335 PF03070 TENA/THI-4/PQQC family AM480_05340 PF06942 AM480_05340 AM480_05345 PF06993 AM480_05345 AM480_05350 PF00107 Zinc-binding dehydrogenase AM480_05350 PF08240 Alcohol dehydrogenase GroES-like domain AM480_05355 PF00440 Bacterial regulatory proteins, tetR family AM480_05355 PF16925 AM480_05355 AM480_05360 PF00005 ABC transporter AM480_05365 PF00990 GGDEF domain AM480_05370 PF16956 AM480_05370 AM480_05375 PF02028 BCCT family transporter AM480_05380 PF07885 Ion channel AM480_05385 PF00474 Sodium:solute symporter family AM480_05390 PF04341 AM480_05390 AM480_05395 PF00072 Response regulator receiver domain AM480_05395 PF00512 His Kinase A (phospho-acceptor) domain AM480_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_05395 PF12860 AM480_05395 AM480_05405 PF00072 Response regulator receiver domain AM480_05405 PF00196 Bacterial regulatory proteins, luxR family AM480_05410 PF03358 NADPH-dependent FMN reductase AM480_05415 PF00296 Luciferase-like monooxygenase AM480_05420 PF13412 Winged helix-turn-helix DNA-binding AM480_05425 PF00857 Isochorismatase family AM480_05430 PF00501 AMP-binding enzyme AM480_05430 PF13193 AMP-binding enzyme C-terminal domain AM480_05430 PF16177 AM480_05430 AM480_05435 PF05656 AM480_05435 AM480_05440 PF00924 Mechanosensitive ion channel AM480_05445 PF04452 RNA methyltransferase AM480_05450 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM480_05455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM480_05460 PF12840 Helix-turn-helix domain AM480_05470 PF16956 AM480_05470 AM480_05475 PF01368 DHH family AM480_05475 PF02272 DHHA1 domain AM480_05480 PF01243 Pyridoxamine 5'-phosphate oxidase AM480_05480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM480_05485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM480_05485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM480_05485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM480_05485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM480_05490 PF00478 IMP dehydrogenase / GMP reductase domain AM480_05490 PF00571 CBS domain AM480_05495 PF03692 AM480_05495 AM480_05500 PF00753 Metallo-beta-lactamase superfamily AM480_05505 PF00593 TonB dependent receptor AM480_05505 PF07715 TonB-dependent Receptor Plug Domain AM480_05510 PF01169 AM480_05510 AM480_05520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM480_05520 PF00364 Biotin-requiring enzyme AM480_05520 PF02817 e3 binding domain AM480_05525 PF00456 Transketolase, thiamine diphosphate binding domain AM480_05530 PF01551 Peptidase family M23 AM480_05535 PF05258 AM480_05535 AM480_05540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM480_05545 PF00091 Tubulin/FtsZ family, GTPase domain AM480_05545 PF12327 FtsZ family, C-terminal domain AM480_05550 PF02491 SHS2 domain inserted in FTSA AM480_05550 PF14450 Cell division protein FtsA AM480_05555 PF03799 Cell division protein FtsQ AM480_05555 PF08478 POTRA domain, FtsQ-type AM480_05560 PF01820 D-ala D-ala ligase N-terminus AM480_05560 PF07478 D-ala D-ala ligase C-terminus AM480_05565 PF01225 Mur ligase family, catalytic domain AM480_05565 PF02875 Mur ligase family, glutamate ligase domain AM480_05565 PF08245 Mur ligase middle domain AM480_05570 PF03033 Glycosyltransferase family 28 N-terminal domain AM480_05570 PF04101 Glycosyltransferase family 28 C-terminal domain AM480_05575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM480_05575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM480_05580 PF08410 AM480_05580 AM480_05585 PF00593 TonB dependent receptor AM480_05585 PF07715 TonB-dependent Receptor Plug Domain AM480_05590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM480_05595 PF13175 AAA ATPase domain AM480_05605 PF00156 Phosphoribosyl transferase domain AM480_05610 PF03372 Endonuclease/Exonuclease/phosphatase family AM480_05615 PF03960 ArsC family AM480_05620 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AM480_05625 PF07859 alpha/beta hydrolase fold AM480_05630 PF00990 GGDEF domain AM480_05635 PF00085 Thioredoxin AM480_05635 PF02683 AM480_05635 AM480_05635 PF11412 Disulphide bond corrector protein DsbC AM480_05640 PF13557 AM480_05640 AM480_05650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM480_05655 PF01522 Polysaccharide deacetylase AM480_05660 PF09349 OHCU decarboxylase AM480_05665 PF00576 HIUase/Transthyretin family AM480_05670 PF00860 Permease family AM480_05675 PF03502 Nucleoside-specific channel-forming protein, Tsx AM480_05680 PF01494 FAD binding domain AM480_05685 PF03561 Allantoicase repeat AM480_05690 PF04115 Ureidoglycolate hydrolase AM480_05695 PF00204 DNA gyrase B AM480_05695 PF00986 DNA gyrase B subunit, carboxyl terminus AM480_05695 PF01751 Toprim domain AM480_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_05700 PF05728 Uncharacterised protein family (UPF0227) AM480_05705 PF07819 PGAP1-like protein AM480_05730 PF01551 Peptidase family M23 AM480_05740 PF05954 Phage late control gene D protein (GPD) AM480_05740 PF10106 AM480_05740 AM480_05740 PF13296 AM480_05740 AM480_05745 PF02600 Disulfide bond formation protein DsbB AM480_05750 PF04262 Glutamate-cysteine ligase AM480_05755 PF06041 Bacterial protein of unknown function (DUF924) AM480_05765 PF04286 AM480_05765 AM480_05770 PF00155 Aminotransferase class I and II AM480_05775 PF01554 MatE AM480_05780 PF00106 short chain dehydrogenase AM480_05790 PF00072 Response regulator receiver domain AM480_05790 PF00486 Transcriptional regulatory protein, C terminal AM480_05795 PF00512 His Kinase A (phospho-acceptor) domain AM480_05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_05795 PF11808 AM480_05795 AM480_05795 PF13188 PAS domain AM480_05800 PF12146 Putative lysophospholipase AM480_05805 PF02666 AM480_05805 AM480_05810 PF00581 Rhodanese-like domain AM480_05815 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM480_05820 PF02580 D-Tyr-tRNA(Tyr) deacylase AM480_05840 PF12710 haloacid dehalogenase-like hydrolase AM480_05840 PF13740 ACT domain AM480_05850 PF00925 GTP cyclohydrolase II AM480_05850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM480_05855 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM480_05860 PF01029 NusB family AM480_05865 PF00586 AIR synthase related protein, N-terminal domain AM480_05865 PF02769 AIR synthase related protein, C-terminal domain AM480_05870 PF04608 Phosphatidylglycerophosphatase A AM480_05875 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_05875 PF12804 MobA-like NTP transferase domain AM480_05875 PF14602 Hexapeptide repeat of succinyl-transferase AM480_05880 PF01380 SIS domain AM480_05880 PF13522 Glutamine amidotransferase domain AM480_05885 PF01177 Asp/Glu/Hydantoin racemase AM480_05890 PF13419 Haloacid dehalogenase-like hydrolase AM480_05895 PF05960 Bacterial protein of unknown function (DUF885) AM480_05900 PF00491 Arginase family AM480_05905 PF01979 Amidohydrolase family AM480_05910 PF00324 Amino acid permease AM480_05915 PF00221 Aromatic amino acid lyase AM480_05920 PF01175 Urocanase AM480_05920 PF17391 AM480_05920 AM480_05920 PF17392 AM480_05920 AM480_05925 PF05962 HutD AM480_05930 PF00392 Bacterial regulatory proteins, gntR family AM480_05930 PF07702 UTRA domain AM480_05935 PF01757 AM480_05935 AM480_05940 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM480_05940 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM480_05945 PF08291 Peptidase M15 AM480_05950 PF00324 Amino acid permease AM480_05955 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_05955 PF09298 Fumarylacetoacetase N-terminal AM480_05960 PF02798 Glutathione S-transferase, N-terminal domain AM480_05960 PF14497 Glutathione S-transferase, C-terminal domain AM480_05965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM480_05970 PF01614 Bacterial transcriptional regulator AM480_05970 PF09339 IclR helix-turn-helix domain AM480_05975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM480_05975 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AM480_05980 PF04463 AM480_05980 AM480_05985 PF01554 MatE AM480_05990 PF01758 Sodium Bile acid symporter family AM480_05995 PF00857 Isochorismatase family AM480_06000 PF00701 Dihydrodipicolinate synthetase family AM480_06010 PF01259 SAICAR synthetase AM480_06020 PF01226 Formate/nitrite transporter AM480_06025 PF00004 ATPase family associated with various cellular activities (AAA) AM480_06025 PF12002 MgsA AAA+ ATPase C terminal AM480_06025 PF16193 AM480_06025 AM480_06030 PF07995 Glucose / Sorbosone dehydrogenase AM480_06035 PF03692 AM480_06035 AM480_06040 PF07043 AM480_06040 AM480_06045 PF01738 Dienelactone hydrolase family AM480_06050 PF01230 HIT domain AM480_06055 PF00633 Helix-hairpin-helix motif AM480_06055 PF00730 HhH-GPD superfamily base excision DNA repair protein AM480_06055 PF14815 NUDIX domain AM480_06060 PF01551 Peptidase family M23 AM480_06070 PF03352 Methyladenine glycosylase AM480_06075 PF00107 Zinc-binding dehydrogenase AM480_06075 PF08240 Alcohol dehydrogenase GroES-like domain AM480_06080 PF00155 Aminotransferase class I and II AM480_06080 PF00392 Bacterial regulatory proteins, gntR family AM480_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_06095 PF03466 LysR substrate binding domain AM480_06100 PF00248 Aldo/keto reductase family AM480_06105 PF07690 Major Facilitator Superfamily AM480_06110 PF01852 START domain AM480_06115 PF01113 Dihydrodipicolinate reductase, N-terminus AM480_06115 PF05173 Dihydrodipicolinate reductase, C-terminus AM480_06125 PF00226 DnaJ domain AM480_06125 PF00684 DnaJ central domain AM480_06125 PF01556 DnaJ C terminal domain AM480_06135 PF00873 AcrB/AcrD/AcrF family AM480_06140 PF16576 AM480_06140 AM480_06145 PF00440 Bacterial regulatory proteins, tetR family AM480_06145 PF14246 AefR-like transcriptional repressor, C-terminal region AM480_06150 PF00311 Phosphoenolpyruvate carboxylase AM480_06155 PF00860 Permease family AM480_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_06160 PF03466 LysR substrate binding domain AM480_06165 PF01925 AM480_06165 AM480_06175 PF00920 Dehydratase family AM480_06180 PF00551 Formyl transferase AM480_06180 PF02911 Formyl transferase, C-terminal domain AM480_06185 PF01029 NusB family AM480_06185 PF01189 NOL1/NOP2/sun family AM480_06185 PF17125 AM480_06185 AM480_06190 PF16951 AM480_06190 AM480_06195 PF00209 Sodium:neurotransmitter symporter family AM480_06240 PF00579 tRNA synthetases class I (W and Y) AM480_06245 PF03702 Uncharacterised protein family (UPF0075) AM480_06250 PF00561 alpha/beta hydrolase fold AM480_06255 PF01521 Iron-sulphur cluster biosynthesis AM480_06275 PF00005 ABC transporter AM480_06275 PF12848 ABC transporter AM480_06280 PF09335 AM480_06280 AM480_06285 PF07361 Cytochrome b562 AM480_06290 PF00204 DNA gyrase B AM480_06290 PF00986 DNA gyrase B subunit, carboxyl terminus AM480_06290 PF01751 Toprim domain AM480_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_06295 PF02463 RecF/RecN/SMC N terminal domain AM480_06300 PF00712 DNA polymerase III beta subunit, N-terminal domain AM480_06300 PF02767 DNA polymerase III beta subunit, central domain AM480_06300 PF02768 DNA polymerase III beta subunit, C-terminal domain AM480_06305 PF00308 Bacterial dnaA protein AM480_06305 PF08299 Bacterial dnaA protein helix-turn-helix AM480_06305 PF11638 DnaA N-terminal domain AM480_06310 PF00468 Ribosomal protein L34 AM480_06315 PF00825 Ribonuclease P AM480_06320 PF01809 AM480_06320 AM480_06325 PF02096 60Kd inner membrane protein AM480_06325 PF14849 YidC periplasmic domain AM480_06330 PF01926 50S ribosome-binding GTPase AM480_06330 PF10396 GTP-binding protein TrmE N-terminus AM480_06330 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AM480_06335 PF02583 Metal-sensitive transcriptional repressor AM480_06340 PF01545 Cation efflux family AM480_06345 PF10411 Disulfide bond isomerase protein N-terminus AM480_06345 PF13098 Thioredoxin-like domain AM480_06350 PF04226 AM480_06350 AM480_06355 PF00156 Phosphoribosyl transferase domain AM480_06360 PF01979 Amidohydrolase family AM480_06365 PF00355 Rieske [2Fe-2S] domain AM480_06370 PF03738 Glutathionylspermidine synthase preATP-grasp AM480_06380 PF03741 AM480_06380 AM480_06385 PF01569 PAP2 superfamily AM480_06390 PF06772 AM480_06390 AM480_06395 PF01225 Mur ligase family, catalytic domain AM480_06395 PF02875 Mur ligase family, glutamate ligase domain AM480_06395 PF08245 Mur ligase middle domain AM480_06400 PF04342 AM480_06400 AM480_06410 PF00731 AIR carboxylase AM480_06415 PF02222 ATP-grasp domain AM480_06420 PF01471 Putative peptidoglycan binding domain AM480_06420 PF13406 Transglycosylase SLT domain AM480_06430 PF00413 Matrixin AM480_06435 PF00413 Matrixin AM480_06440 PF00012 Hsp70 protein AM480_06445 PF01025 GrpE AM480_06470 PF07859 alpha/beta hydrolase fold AM480_06475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM480_06505 PF12796 Ankyrin repeats (3 copies) AM480_06510 PF03358 NADPH-dependent FMN reductase AM480_06515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_06520 PF01252 AM480_06520 AM480_06525 PF00133 tRNA synthetases class I (I, L, M and V) AM480_06525 PF06827 Zinc finger found in FPG and IleRS AM480_06525 PF08264 Anticodon-binding domain of tRNA AM480_06530 PF01687 Riboflavin kinase AM480_06530 PF06574 FAD synthetase AM480_06535 PF03595 Voltage-dependent anion channel AM480_06540 PF01048 Phosphorylase superfamily AM480_06545 PF00440 Bacterial regulatory proteins, tetR family AM480_06545 PF08362 YcdC-like protein, C-terminal region AM480_06550 PF00005 ABC transporter AM480_06555 PF00528 Binding-protein-dependent transport system inner membrane component AM480_06560 PF00296 Luciferase-like monooxygenase AM480_06565 PF13379 NMT1-like family AM480_06570 PF09084 NMT1/THI5 like AM480_06575 PF00583 Acetyltransferase (GNAT) family AM480_06575 PF00696 Amino acid kinase family AM480_06580 PF11776 Domain of unknown function (DUF3315) AM480_06585 PF11776 Domain of unknown function (DUF3315) AM480_06590 PF00106 short chain dehydrogenase AM480_06595 PF13419 Haloacid dehalogenase-like hydrolase AM480_06600 PF13489 Methyltransferase domain AM480_06605 PF01323 DSBA-like thioredoxin domain AM480_06610 PF00440 Bacterial regulatory proteins, tetR family AM480_06615 PF00440 Bacterial regulatory proteins, tetR family AM480_06620 PF00175 Oxidoreductase NAD-binding domain AM480_06620 PF00970 Oxidoreductase FAD-binding domain AM480_06625 PF00487 AM480_06625 AM480_06630 PF01138 3' exoribonuclease family, domain 1 AM480_06630 PF03725 3' exoribonuclease family, domain 2 AM480_06640 PF04185 Phosphoesterase family AM480_06640 PF05506 AM480_06640 AM480_06650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM480_06650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM480_06655 PF01510 N-acetylmuramoyl-L-alanine amidase AM480_06660 PF03023 AM480_06660 AM480_06665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_06665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM480_06670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_06670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM480_06675 PF02706 Chain length determinant protein AM480_06675 PF13614 AAA domain AM480_06675 PF13807 AM480_06675 AM480_06680 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM480_06685 PF02563 Polysaccharide biosynthesis/export protein AM480_06690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM480_06690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM480_06690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM480_06695 PF01943 AM480_06695 AM480_06700 PF04230 AM480_06700 AM480_06705 PF00535 Glycosyl transferase family 2 AM480_06715 PF00534 Glycosyl transferases group 1 AM480_06720 PF00535 Glycosyl transferase family 2 AM480_06725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM480_06725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM480_06730 PF02397 AM480_06730 AM480_06735 PF00483 Nucleotidyl transferase AM480_06740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM480_06740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM480_06745 PF00342 Phosphoglucose isomerase AM480_06750 PF16363 AM480_06750 AM480_06765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM480_06765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM480_06765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM480_06765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM480_06770 PF02652 AM480_06770 AM480_06775 PF00392 Bacterial regulatory proteins, gntR family AM480_06775 PF07729 FCD domain AM480_06780 PF01070 FMN-dependent dehydrogenase AM480_06785 PF01565 FAD binding domain AM480_06785 PF09330 D-lactate dehydrogenase, membrane binding AM480_06790 PF00155 Aminotransferase class I and II AM480_06800 PF00392 Bacterial regulatory proteins, gntR family AM480_06800 PF07729 FCD domain AM480_06805 PF13714 Phosphoenolpyruvate phosphomutase AM480_06810 PF00285 Citrate synthase AM480_06815 PF00330 Aconitase family (aconitate hydratase) AM480_06815 PF00694 Aconitase C-terminal domain AM480_06830 PF13548 AM480_06830 AM480_06835 PF00293 NUDIX domain AM480_06840 PF02452 PemK-like protein AM480_06845 PF12686 AM480_06845 AM480_06860 PF00109 Beta-ketoacyl synthase, N-terminal domain AM480_06860 PF02801 Beta-ketoacyl synthase, C-terminal domain AM480_06865 PF00106 short chain dehydrogenase AM480_06870 PF06210 AM480_06870 AM480_06875 PF00849 RNA pseudouridylate synthase AM480_06880 PF06877 Regulator of ribonuclease activity B AM480_06885 PF12680 SnoaL-like domain AM480_06890 PF00593 TonB dependent receptor AM480_06890 PF07715 TonB-dependent Receptor Plug Domain AM480_06895 PF07786 AM480_06895 AM480_06900 PF01037 AsnC family AM480_06900 PF13412 Winged helix-turn-helix DNA-binding AM480_06905 PF01266 FAD dependent oxidoreductase AM480_06910 PF00842 Alanine racemase, C-terminal domain AM480_06910 PF01168 Alanine racemase, N-terminal domain AM480_06915 PF01042 Endoribonuclease L-PSP AM480_06920 PF00324 Amino acid permease AM480_06925 PF00324 Amino acid permease AM480_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_06930 PF03466 LysR substrate binding domain AM480_06935 PF00171 Aldehyde dehydrogenase family AM480_06940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM480_06940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM480_06945 PF00501 AMP-binding enzyme AM480_06945 PF13193 AMP-binding enzyme C-terminal domain AM480_06950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_06950 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_06950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_06955 PF00378 Enoyl-CoA hydratase/isomerase family AM480_06960 PF16113 AM480_06960 AM480_06965 PF07690 Major Facilitator Superfamily AM480_06970 PF00765 Autoinducer synthetase AM480_06975 PF16245 AM480_06975 AM480_06980 PF00196 Bacterial regulatory proteins, luxR family AM480_06980 PF03472 Autoinducer binding domain AM480_06985 PF00501 AMP-binding enzyme AM480_06990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_06990 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_06995 PF00550 Phosphopantetheine attachment site AM480_07000 PF00501 AMP-binding enzyme AM480_07000 PF00550 Phosphopantetheine attachment site AM480_07000 PF00668 Condensation domain AM480_07000 PF00975 Thioesterase domain AM480_07000 PF13193 AMP-binding enzyme C-terminal domain AM480_07005 PF03176 MMPL family AM480_07005 PF10604 Polyketide cyclase / dehydrase and lipid transport AM480_07005 PF17131 AM480_07005 AM480_07015 PF01370 NAD dependent epimerase/dehydratase family AM480_07015 PF12697 Alpha/beta hydrolase family AM480_07020 PF01648 4'-phosphopantetheinyl transferase superfamily AM480_07035 PF01722 BolA-like protein AM480_07040 PF04247 AM480_07040 AM480_07045 PF13614 AAA domain AM480_07055 PF01810 AM480_07055 AM480_07060 PF09335 AM480_07060 AM480_07065 PF07681 AM480_07065 AM480_07070 PF04286 AM480_07070 AM480_07075 PF00117 Glutamine amidotransferase class-I AM480_07075 PF00958 GMP synthase C terminal domain AM480_07075 PF02540 NAD synthase AM480_07080 PF01909 Nucleotidyltransferase domain AM480_07080 PF13427 AM480_07080 AM480_07085 PF03551 Transcriptional regulator PadR-like family AM480_07090 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AM480_07095 PF02678 Pirin AM480_07095 PF05726 Pirin C-terminal cupin domain AM480_07100 PF02566 OsmC-like protein AM480_07105 PF02798 Glutathione S-transferase, N-terminal domain AM480_07105 PF14497 Glutathione S-transferase, C-terminal domain AM480_07110 PF05036 Sporulation related domain AM480_07115 PF00750 tRNA synthetases class I (R) AM480_07115 PF03485 Arginyl tRNA synthetase N terminal domain AM480_07115 PF05746 DALR anticodon binding domain AM480_07120 PF00390 Malic enzyme, N-terminal domain AM480_07120 PF03949 Malic enzyme, NAD binding domain AM480_07125 PF04261 Dyp-type peroxidase family AM480_07130 PF01810 AM480_07130 AM480_07135 PF00950 AM480_07135 AM480_07140 PF00005 ABC transporter AM480_07145 PF01475 Ferric uptake regulator family AM480_07150 PF01297 Periplasmic solute binding protein family AM480_07155 PF03899 AM480_07155 AM480_07160 PF00119 ATP synthase A chain AM480_07165 PF00137 ATP synthase subunit C AM480_07170 PF00430 ATP synthase B/B' CF(0) AM480_07175 PF00213 ATP synthase delta (OSCP) subunit AM480_07180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM480_07180 PF00306 ATP synthase alpha/beta chain, C terminal domain AM480_07180 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM480_07185 PF00231 ATP synthase AM480_07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM480_07190 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM480_07195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM480_07205 PF00255 Glutathione peroxidase AM480_07210 PF12833 Helix-turn-helix domain AM480_07215 PF07690 Major Facilitator Superfamily AM480_07220 PF00440 Bacterial regulatory proteins, tetR family AM480_07225 PF00892 EamA-like transporter family AM480_07230 PF01300 Telomere recombination AM480_07235 PF02481 DNA recombination-mediator protein A AM480_07240 PF01476 LysM domain AM480_07245 PF01327 Polypeptide deformylase AM480_07250 PF11162 AM480_07250 AM480_07255 PF00593 TonB dependent receptor AM480_07255 PF07715 TonB-dependent Receptor Plug Domain AM480_07265 PF09995 AM480_07265 AM480_07270 PF00440 Bacterial regulatory proteins, tetR family AM480_07300 PF13527 Acetyltransferase (GNAT) domain AM480_07305 PF00291 Pyridoxal-phosphate dependent enzyme AM480_07310 PF01464 Transglycosylase SLT domain AM480_07315 PF03358 NADPH-dependent FMN reductase AM480_07320 PF11158 AM480_07320 AM480_07325 PF13411 MerR HTH family regulatory protein AM480_07330 PF13449 Esterase-like activity of phytase AM480_07335 PF04055 Radical SAM superfamily AM480_07335 PF08497 AM480_07335 AM480_07335 PF11842 AM480_07335 AM480_07340 PF10881 AM480_07340 AM480_07345 PF01042 Endoribonuclease L-PSP AM480_07350 PF00817 impB/mucB/samB family AM480_07350 PF11798 IMS family HHH motif AM480_07350 PF11799 impB/mucB/samB family C-terminal domain AM480_07355 PF01183 Glycosyl hydrolases family 25 AM480_07360 PF07690 Major Facilitator Superfamily AM480_07365 PF03641 Possible lysine decarboxylase AM480_07370 PF00571 CBS domain AM480_07370 PF03471 Transporter associated domain AM480_07370 PF03741 AM480_07370 AM480_07375 PF02810 SEC-C motif AM480_07380 PF03458 AM480_07380 AM480_07385 PF00083 Sugar (and other) transporter AM480_07390 PF00521 DNA gyrase/topoisomerase IV, subunit A AM480_07390 PF03989 DNA gyrase C-terminal domain, beta-propeller AM480_07395 PF00501 AMP-binding enzyme AM480_07395 PF13193 AMP-binding enzyme C-terminal domain AM480_07405 PF01124 MAPEG family AM480_07410 PF00719 Inorganic pyrophosphatase AM480_07415 PF03573 outer membrane porin, OprD family AM480_07420 PF09694 AM480_07420 AM480_07425 PF00701 Dihydrodipicolinate synthetase family AM480_07430 PF00596 Class II Aldolase and Adducin N-terminal domain AM480_07435 PF00155 Aminotransferase class I and II AM480_07435 PF00392 Bacterial regulatory proteins, gntR family AM480_07440 PF01078 Magnesium chelatase, subunit ChlI AM480_07440 PF13335 AM480_07440 AM480_07440 PF13541 Subunit ChlI of Mg-chelatase AM480_07445 PF04380 AM480_07445 AM480_07450 PF00543 Nitrogen regulatory protein P-II AM480_07455 PF00909 Ammonium Transporter Family AM480_07460 PF03477 ATP cone domain AM480_07465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM480_07465 PF01872 RibD C-terminal domain AM480_07470 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM480_07475 PF00677 Lumazine binding domain AM480_07490 PF04364 DNA polymerase III chi subunit, HolC AM480_07495 PF00883 Cytosol aminopeptidase family, catalytic domain AM480_07495 PF02789 Cytosol aminopeptidase family, N-terminal domain AM480_07500 PF03739 AM480_07500 AM480_07505 PF03739 AM480_07505 AM480_07510 PF01676 Metalloenzyme superfamily AM480_07510 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM480_07515 PF03572 Peptidase family S41 AM480_07520 PF00072 Response regulator receiver domain AM480_07520 PF00158 Sigma-54 interaction domain AM480_07520 PF02954 Bacterial regulatory protein, Fis family AM480_07525 PF00512 His Kinase A (phospho-acceptor) domain AM480_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_07530 PF00072 Response regulator receiver domain AM480_07530 PF00196 Bacterial regulatory proteins, luxR family AM480_07535 PF00768 D-alanyl-D-alanine carboxypeptidase AM480_07540 PF00291 Pyridoxal-phosphate dependent enzyme AM480_07545 PF00742 Homoserine dehydrogenase AM480_07545 PF01842 ACT domain AM480_07545 PF03447 Homoserine dehydrogenase, NAD binding domain AM480_07550 PF10411 Disulfide bond isomerase protein N-terminus AM480_07550 PF13098 Thioredoxin-like domain AM480_07555 PF00589 Phage integrase family AM480_07555 PF02899 Phage integrase, N-terminal SAM-like domain AM480_07560 PF04023 FeoA domain AM480_07565 PF02421 Ferrous iron transport protein B AM480_07565 PF07664 AM480_07565 AM480_07565 PF07670 Nucleoside recognition AM480_07575 PF02875 Mur ligase family, glutamate ligase domain AM480_07575 PF08245 Mur ligase middle domain AM480_07580 PF01098 AM480_07580 AM480_07585 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM480_07590 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM480_07595 PF00149 Calcineurin-like phosphoesterase AM480_07615 PF01964 ThiC family AM480_07615 PF13667 ThiC-associated domain AM480_07625 PF00440 Bacterial regulatory proteins, tetR family AM480_07630 PF00892 EamA-like transporter family AM480_07635 PF02321 Outer membrane efflux protein AM480_07640 PF01895 PhoU domain AM480_07645 PF04362 Bacterial Fe(2+) trafficking AM480_07650 PF00206 Lyase AM480_07650 PF14698 Argininosuccinate lyase C-terminal AM480_07655 PF06580 AM480_07655 AM480_07660 PF00072 Response regulator receiver domain AM480_07660 PF04397 LytTr DNA-binding domain AM480_07665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM480_07665 PF03900 Porphobilinogen deaminase, C-terminal domain AM480_07670 PF02602 Uroporphyrinogen-III synthase HemD AM480_07685 PF13279 Thioesterase-like superfamily AM480_07695 PF00816 H-NS histone family AM480_07700 PF01203 AM480_07700 AM480_07705 PF11356 Type IV pilus biogenesis AM480_07710 PF00263 AM480_07710 AM480_07710 PF03958 Bacterial type II/III secretion system short domain AM480_07715 PF00498 FHA domain AM480_07720 PF13419 Haloacid dehalogenase-like hydrolase AM480_07725 PF00425 chorismate binding enzyme AM480_07725 PF04715 Anthranilate synthase component I, N terminal region AM480_07750 PF00009 Elongation factor Tu GTP binding domain AM480_07750 PF03143 Elongation factor Tu C-terminal domain AM480_07750 PF03144 Elongation factor Tu domain 2 AM480_07760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM480_07765 PF02357 Transcription termination factor nusG AM480_07770 PF00298 Ribosomal protein L11, RNA binding domain AM480_07770 PF03946 Ribosomal protein L11, N-terminal domain AM480_07775 PF00687 Ribosomal protein L1p/L10e family AM480_07780 PF00466 Ribosomal protein L10 AM480_07785 PF00542 Ribosomal protein L7/L12 C-terminal domain AM480_07785 PF16320 AM480_07785 AM480_07790 PF00562 RNA polymerase Rpb2, domain 6 AM480_07790 PF04560 RNA polymerase Rpb2, domain 7 AM480_07790 PF04561 RNA polymerase Rpb2, domain 2 AM480_07790 PF04563 RNA polymerase beta subunit AM480_07790 PF04565 RNA polymerase Rpb2, domain 3 AM480_07790 PF10385 RNA polymerase beta subunit external 1 domain AM480_07795 PF00623 RNA polymerase Rpb1, domain 2 AM480_07795 PF04983 RNA polymerase Rpb1, domain 3 AM480_07795 PF04997 RNA polymerase Rpb1, domain 1 AM480_07795 PF04998 RNA polymerase Rpb1, domain 5 AM480_07795 PF05000 RNA polymerase Rpb1, domain 4 AM480_07805 PF13441 AM480_07805 AM480_07810 PF14539 Domain of unknown function (DUF4442) AM480_07815 PF00561 alpha/beta hydrolase fold AM480_07820 PF03553 AM480_07820 AM480_07820 PF13726 AM480_07820 AM480_07825 PF03922 OmpW family AM480_07830 PF07007 Protein of unknown function (DUF1311) AM480_07835 PF00183 Hsp90 protein AM480_07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_07850 PF01323 DSBA-like thioredoxin domain AM480_07860 PF13411 MerR HTH family regulatory protein AM480_07865 PF06821 Serine hydrolase AM480_07875 PF00108 Thiolase, N-terminal domain AM480_07875 PF02803 Thiolase, C-terminal domain AM480_07880 PF00378 Enoyl-CoA hydratase/isomerase family AM480_07880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM480_07880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM480_07885 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AM480_07915 PF01541 GIY-YIG catalytic domain AM480_07915 PF02151 UvrB/uvrC motif AM480_07915 PF08459 UvrC Helix-hairpin-helix N-terminal AM480_07915 PF14520 Helix-hairpin-helix domain AM480_07920 PF13622 Thioesterase-like superfamily AM480_07925 PF01066 CDP-alcohol phosphatidyltransferase AM480_07930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM480_07930 PF12833 Helix-turn-helix domain AM480_07935 PF13532 2OG-Fe(II) oxygenase superfamily AM480_07940 PF01614 Bacterial transcriptional regulator AM480_07945 PF04632 AM480_07945 AM480_07950 PF07869 AM480_07950 AM480_07955 PF13437 HlyD family secretion protein AM480_07955 PF13533 Biotin-lipoyl like AM480_07960 PF03652 Uncharacterised protein family (UPF0081) AM480_07965 PF02622 Uncharacterized ACR, COG1678 AM480_07970 PF02463 RecF/RecN/SMC N terminal domain AM480_07980 PF06865 Protein of unknown function (DUF1255) AM480_07985 PF00588 SpoU rRNA Methylase family AM480_07985 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM480_07990 PF00892 EamA-like transporter family AM480_07995 PF01121 Dephospho-CoA kinase AM480_08000 PF01478 Type IV leader peptidase family AM480_08000 PF06750 AM480_08000 AM480_08005 PF00482 Type II secretion system (T2SS), protein F AM480_08010 PF00437 Type II/IV secretion system protein AM480_08010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM480_08015 PF00121 Triosephosphate isomerase AM480_08020 PF03840 Preprotein translocase SecG subunit AM480_08040 PF02576 Uncharacterised BCR, YhbC family COG0779 AM480_08040 PF17384 AM480_08040 AM480_08045 PF08529 NusA N-terminal domain AM480_08045 PF13184 NusA-like KH domain AM480_08045 PF14520 Helix-hairpin-helix domain AM480_08050 PF00009 Elongation factor Tu GTP binding domain AM480_08050 PF04760 Translation initiation factor IF-2, N-terminal region AM480_08050 PF08364 AM480_08050 AM480_08050 PF11987 Translation-initiation factor 2 AM480_08055 PF02033 Ribosome-binding factor A AM480_08060 PF03334 AM480_08060 AM480_08065 PF04066 AM480_08065 AM480_08070 PF01899 AM480_08070 AM480_08075 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM480_08080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM480_08085 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM480_08085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM480_08085 PF04039 AM480_08085 AM480_08085 PF13244 AM480_08085 AM480_08090 PF13476 AAA domain AM480_08095 PF13245 Part of AAA domain AM480_08095 PF13361 UvrD-like helicase C-terminal domain AM480_08100 PF01502 Phosphoribosyl-AMP cyclohydrolase AM480_08100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM480_08105 PF01494 FAD binding domain AM480_08110 PF03109 AM480_08110 AM480_08120 PF01209 ubiE/COQ5 methyltransferase family AM480_08130 PF03976 Polyphosphate kinase 2 (PPK2) AM480_08140 PF04257 Exodeoxyribonuclease V, gamma subunit AM480_08145 PF00580 UvrD/REP helicase N-terminal domain AM480_08145 PF12705 PD-(D/E)XK nuclease superfamily AM480_08145 PF13361 UvrD-like helicase C-terminal domain AM480_08150 PF13538 UvrD-like helicase C-terminal domain AM480_08150 PF13604 AAA domain AM480_08155 PF00144 Beta-lactamase AM480_08160 PF00312 Ribosomal protein S15 AM480_08165 PF00013 KH domain AM480_08165 PF00575 S1 RNA binding domain AM480_08165 PF01138 3' exoribonuclease family, domain 1 AM480_08165 PF03725 3' exoribonuclease family, domain 2 AM480_08165 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM480_08170 PF01544 CorA-like Mg2+ transporter protein AM480_08175 PF13591 MerR HTH family regulatory protein AM480_08180 PF00226 DnaJ domain AM480_08180 PF01556 DnaJ C terminal domain AM480_08185 PF01810 AM480_08185 AM480_08190 PF01430 Hsp33 protein AM480_08195 PF00999 Sodium/hydrogen exchanger family AM480_08195 PF02254 TrkA-N domain AM480_08200 PF00271 Helicase conserved C-terminal domain AM480_08200 PF04851 Type III restriction enzyme, res subunit AM480_08205 PF00482 Type II secretion system (T2SS), protein F AM480_08210 PF07963 Prokaryotic N-terminal methylation motif AM480_08210 PF08334 Type II secretion system (T2SS), protein G AM480_08220 PF01588 Putative tRNA binding domain AM480_08225 PF00795 Carbon-nitrogen hydrolase AM480_08230 PF00571 CBS domain AM480_08230 PF03471 Transporter associated domain AM480_08235 PF01206 Sulfurtransferase TusA AM480_08240 PF01946 Thi4 family AM480_08240 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AM480_08245 PF06938 Protein of unknown function (DUF1285) AM480_08250 PF01177 Asp/Glu/Hydantoin racemase AM480_08255 PF13271 AM480_08255 AM480_08260 PF00762 Ferrochelatase AM480_08265 PF00753 Metallo-beta-lactamase superfamily AM480_08270 PF03884 Domain of unknown function (DUF329) AM480_08275 PF02390 Putative methyltransferase AM480_08280 PF03486 HI0933-like protein AM480_08285 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_08290 PF02537 AM480_08290 AM480_08300 PF08888 HopJ type III effector protein AM480_08305 PF01197 Ribosomal protein L31 AM480_08310 PF03109 AM480_08310 AM480_08315 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_08315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_08315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_08320 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_08325 PF01554 MatE AM480_08330 PF04657 AM480_08330 AM480_08335 PF04055 Radical SAM superfamily AM480_08335 PF06969 HemN C-terminal domain AM480_08340 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_08345 PF03466 LysR substrate binding domain AM480_08360 PF00501 AMP-binding enzyme AM480_08360 PF13193 AMP-binding enzyme C-terminal domain AM480_08365 PF00575 S1 RNA binding domain AM480_08365 PF10150 Ribonuclease E/G family AM480_08375 PF00849 RNA pseudouridylate synthase AM480_08375 PF01479 S4 domain AM480_08380 PF13419 Haloacid dehalogenase-like hydrolase AM480_08385 PF08279 HTH domain AM480_08385 PF13280 AM480_08385 AM480_08390 PF02798 Glutathione S-transferase, N-terminal domain AM480_08390 PF14497 Glutathione S-transferase, C-terminal domain AM480_08395 PF07077 AM480_08395 AM480_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_08400 PF03466 LysR substrate binding domain AM480_08405 PF12706 Beta-lactamase superfamily domain AM480_08410 PF00141 Peroxidase AM480_08415 PF00391 PEP-utilising enzyme, mobile domain AM480_08415 PF02896 PEP-utilising enzyme, TIM barrel domain AM480_08415 PF05524 PEP-utilising enzyme, N-terminal AM480_08415 PF13185 GAF domain AM480_08420 PF00293 NUDIX domain AM480_08425 PF12710 haloacid dehalogenase-like hydrolase AM480_08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_08440 PF03466 LysR substrate binding domain AM480_08445 PF09834 AM480_08445 AM480_08450 PF00330 Aconitase family (aconitate hydratase) AM480_08455 PF00694 Aconitase C-terminal domain AM480_08465 PF00180 Isocitrate/isopropylmalate dehydrogenase AM480_08475 PF07007 Protein of unknown function (DUF1311) AM480_08480 PF01176 Translation initiation factor 1A / IF-1 AM480_08485 PF12625 AM480_08485 AM480_08485 PF12833 Helix-turn-helix domain AM480_08490 PF01416 tRNA pseudouridine synthase AM480_08495 PF00710 Asparaginase AM480_08510 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM480_08510 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM480_08515 PF03372 Endonuclease/Exonuclease/phosphatase family AM480_08520 PF00375 Sodium:dicarboxylate symporter family AM480_08525 PF00534 Glycosyl transferases group 1 AM480_08525 PF13439 Glycosyltransferase Family 4 AM480_08530 PF03279 AM480_08530 AM480_08535 PF01810 AM480_08535 AM480_08540 PF00005 ABC transporter AM480_08540 PF12848 ABC transporter AM480_08540 PF16326 AM480_08540 AM480_08545 PF04102 SlyX AM480_08550 PF08240 Alcohol dehydrogenase GroES-like domain AM480_08550 PF13602 Zinc-binding dehydrogenase AM480_08555 PF01638 HxlR-like helix-turn-helix AM480_08565 PF01131 DNA topoisomerase AM480_08565 PF01396 AM480_08565 AM480_08565 PF01751 Toprim domain AM480_08565 PF08272 Topoisomerase I zinc-ribbon-like AM480_08575 PF03729 AM480_08575 AM480_08580 PF00580 UvrD/REP helicase N-terminal domain AM480_08580 PF13361 UvrD-like helicase C-terminal domain AM480_08585 PF00076 RNA recognition motif AM480_08605 PF00999 Sodium/hydrogen exchanger family AM480_08605 PF02254 TrkA-N domain AM480_08610 PF00471 Ribosomal protein L33 AM480_08615 PF00830 Ribosomal L28 family AM480_08620 PF00171 Aldehyde dehydrogenase family AM480_08625 PF00440 Bacterial regulatory proteins, tetR family AM480_08625 PF13972 Bacterial transcriptional repressor AM480_08630 PF00551 Formyl transferase AM480_08630 PF01842 ACT domain AM480_08635 PF03544 Gram-negative bacterial TonB protein C-terminal AM480_08640 PF01618 AM480_08640 AM480_08645 PF02472 Biopolymer transport protein ExbD/TolR AM480_08650 PF01625 Peptide methionine sulfoxide reductase AM480_08655 PF13387 AM480_08655 AM480_08660 PF00186 Dihydrofolate reductase AM480_08665 PF00303 Thymidylate synthase AM480_08680 PF01790 AM480_08680 AM480_08685 PF05742 AM480_08685 AM480_08690 PF05787 Bacterial protein of unknown function (DUF839) AM480_08695 PF05787 Bacterial protein of unknown function (DUF839) AM480_08700 PF00902 Sec-independent protein translocase protein (TatC) AM480_08705 PF02416 mttA/Hcf106 family AM480_08710 PF02416 mttA/Hcf106 family AM480_08720 PF01725 Ham1 family AM480_08725 PF08238 Sel1 repeat AM480_08730 PF07021 Methionine biosynthesis protein MetW AM480_08735 PF00561 alpha/beta hydrolase fold AM480_08740 PF00682 HMGL-like AM480_08740 PF08502 LeuA allosteric (dimerisation) domain AM480_08745 PF13640 2OG-Fe(II) oxygenase superfamily AM480_08750 PF00593 TonB dependent receptor AM480_08750 PF07715 TonB-dependent Receptor Plug Domain AM480_08755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_08755 PF05697 Bacterial trigger factor protein (TF) AM480_08755 PF05698 Bacterial trigger factor protein (TF) C-terminus AM480_08760 PF00574 Clp protease AM480_08765 PF06689 ClpX C4-type zinc finger AM480_08765 PF07724 AAA domain (Cdc48 subfamily) AM480_08765 PF10431 C-terminal, D2-small domain, of ClpB protein AM480_08770 PF11008 AM480_08770 AM480_08775 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AM480_08780 PF05681 AM480_08780 AM480_08780 PF05683 Fumarase C-terminus AM480_08785 PF01515 Phosphate acetyl/butaryl transferase AM480_08785 PF07085 DRTGG domain AM480_08785 PF13500 AAA domain AM480_08790 PF00871 Acetokinase family AM480_08795 PF00920 Dehydratase family AM480_08800 PF01081 KDPG and KHG aldolase AM480_08805 PF02447 AM480_08805 AM480_08810 PF01202 Shikimate kinase AM480_08815 PF00171 Aldehyde dehydrogenase family AM480_08820 PF00171 Aldehyde dehydrogenase family AM480_08825 PF00561 alpha/beta hydrolase fold AM480_08830 PF04072 Leucine carboxyl methyltransferase AM480_08835 PF00933 Glycosyl hydrolase family 3 N terminal domain AM480_08840 PF00595 PDZ domain (Also known as DHR or GLGF) AM480_08840 PF03572 Peptidase family S41 AM480_08840 PF11818 AM480_08840 AM480_08845 PF00534 Glycosyl transferases group 1 AM480_08845 PF13439 Glycosyltransferase Family 4 AM480_08850 PF01569 PAP2 superfamily AM480_08855 PF04384 Iron-sulphur cluster assembly AM480_08860 PF00334 Nucleoside diphosphate kinase AM480_08865 PF04055 Radical SAM superfamily AM480_08870 PF13432 Tetratricopeptide repeat AM480_08875 PF13413 Helix-turn-helix domain AM480_08875 PF13464 AM480_08875 AM480_08880 PF04551 GcpE protein AM480_08885 PF03129 Anticodon binding domain AM480_08885 PF13393 Histidyl-tRNA synthetase AM480_08890 PF09976 Tetratricopeptide repeat AM480_08895 PF13360 PQQ-like domain AM480_08900 PF01926 50S ribosome-binding GTPase AM480_08900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM480_08905 PF01648 4'-phosphopantetheinyl transferase superfamily AM480_08910 PF02556 Preprotein translocase subunit SecB AM480_08915 PF00462 Glutaredoxin AM480_08920 PF00581 Rhodanese-like domain AM480_08925 PF03193 Protein of unknown function, DUF258 AM480_08930 PF00929 Exonuclease AM480_08935 PF12811 AM480_08935 AM480_08940 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_08945 PF02321 Outer membrane efflux protein AM480_08950 PF00005 ABC transporter AM480_08950 PF02687 AM480_08950 AM480_08950 PF12704 MacB-like periplasmic core domain AM480_08955 PF16576 AM480_08955 AM480_08960 PF06144 DNA polymerase III, delta subunit AM480_08970 PF00133 tRNA synthetases class I (I, L, M and V) AM480_08970 PF08264 Anticodon-binding domain of tRNA AM480_08970 PF09334 tRNA synthetases class I (M) AM480_08970 PF13603 Leucyl-tRNA synthetase, Domain 2 AM480_08980 PF13511 AM480_08980 AM480_08985 PF00205 Thiamine pyrophosphate enzyme, central domain AM480_08985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM480_08985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM480_08990 PF10369 Small subunit of acetolactate synthase AM480_08990 PF13710 ACT domain AM480_08995 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM480_08995 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AM480_09000 PF00563 EAL domain AM480_09000 PF00990 GGDEF domain AM480_09010 PF00440 Bacterial regulatory proteins, tetR family AM480_09015 PF00440 Bacterial regulatory proteins, tetR family AM480_09025 PF00009 Elongation factor Tu GTP binding domain AM480_09025 PF16658 AM480_09025 AM480_09035 PF11738 Protein of unknown function (DUF3298) AM480_09040 PF01026 TatD related DNase AM480_09045 PF00330 Aconitase family (aconitate hydratase) AM480_09045 PF00694 Aconitase C-terminal domain AM480_09050 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AM480_09055 PF00899 ThiF family AM480_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09065 PF03466 LysR substrate binding domain AM480_09075 PF01207 Dihydrouridine synthase (Dus) AM480_09080 PF07690 Major Facilitator Superfamily AM480_09085 PF01042 Endoribonuclease L-PSP AM480_09090 PF00892 EamA-like transporter family AM480_09095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM480_09095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM480_09100 PF12769 Domain of unknown function (DUF3814) AM480_09105 PF02233 NAD(P) transhydrogenase beta subunit AM480_09110 PF00106 short chain dehydrogenase AM480_09115 PF02410 Oligomerisation domain AM480_09120 PF01261 Xylose isomerase-like TIM barrel AM480_09125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM480_09125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM480_09130 PF00378 Enoyl-CoA hydratase/isomerase family AM480_09135 PF00072 Response regulator receiver domain AM480_09135 PF00512 His Kinase A (phospho-acceptor) domain AM480_09135 PF01627 Hpt domain AM480_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_09140 PF00291 Pyridoxal-phosphate dependent enzyme AM480_09145 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AM480_09150 PF05958 tRNA (Uracil-5-)-methyltransferase AM480_09155 PF02824 TGS domain AM480_09155 PF04607 Region found in RelA / SpoT proteins AM480_09155 PF13291 ACT domain AM480_09155 PF13328 HD domain AM480_09160 PF00106 short chain dehydrogenase AM480_09165 PF03819 MazG nucleotide pyrophosphohydrolase domain AM480_09170 PF12836 Helix-hairpin-helix motif AM480_09175 PF01743 Poly A polymerase head domain AM480_09175 PF12626 Polymerase A arginine-rich C-terminus AM480_09175 PF12627 Probable RNA and SrmB- binding site of polymerase A AM480_09180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM480_09185 PF02548 Ketopantoate hydroxymethyltransferase AM480_09190 PF02569 Pantoate-beta-alanine ligase AM480_09195 PF03668 AM480_09195 AM480_09200 PF00381 PTS HPr component phosphorylation site AM480_09205 PF04751 Protein of unknown function (DUF615) AM480_09210 PF00501 AMP-binding enzyme AM480_09210 PF13193 AMP-binding enzyme C-terminal domain AM480_09215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM480_09215 PF02824 TGS domain AM480_09215 PF03129 Anticodon binding domain AM480_09215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM480_09220 PF00707 Translation initiation factor IF-3, C-terminal domain AM480_09220 PF05198 Translation initiation factor IF-3, N-terminal domain AM480_09230 PF00043 Glutathione S-transferase, C-terminal domain AM480_09230 PF02798 Glutathione S-transferase, N-terminal domain AM480_09235 PF09335 AM480_09235 AM480_09240 PF05977 Transmembrane secretion effector AM480_09245 PF01632 Ribosomal protein L35 AM480_09250 PF00453 Ribosomal protein L20 AM480_09275 PF01409 tRNA synthetases class II core domain (F) AM480_09275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM480_09280 PF01588 Putative tRNA binding domain AM480_09280 PF03147 Ferredoxin-fold anticodon binding domain AM480_09280 PF03483 B3/4 domain AM480_09280 PF03484 tRNA synthetase B5 domain AM480_09285 PF00216 Bacterial DNA-binding protein AM480_09300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM480_09300 PF07497 Rho termination factor, RNA-binding domain AM480_09300 PF07498 Rho termination factor, N-terminal domain AM480_09305 PF00085 Thioredoxin AM480_09310 PF01966 HD domain AM480_09310 PF02541 Ppx/GppA phosphatase family AM480_09315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM480_09320 PF01171 PP-loop family AM480_09320 PF09179 TilS substrate binding domain AM480_09320 PF11734 TilS substrate C-terminal domain AM480_09325 PF03807 NADP oxidoreductase coenzyme F420-dependent AM480_09325 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM480_09330 PF02325 AM480_09330 AM480_09335 PF00476 DNA polymerase family A AM480_09335 PF01367 5'-3' exonuclease, C-terminal SAM fold AM480_09335 PF01612 3'-5' exonuclease AM480_09335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM480_09340 PF10101 AM480_09340 AM480_09345 PF00924 Mechanosensitive ion channel AM480_09355 PF00437 Type II/IV secretion system protein AM480_09360 PF02566 OsmC-like protein AM480_09365 PF01047 MarR family AM480_09370 PF16309 AM480_09370 AM480_09375 PF00795 Carbon-nitrogen hydrolase AM480_09380 PF01740 STAS domain AM480_09385 PF07228 Stage II sporulation protein E (SpoIIE) AM480_09390 PF04333 AM480_09390 AM480_09420 PF00309 AM480_09420 AM480_09420 PF04552 Sigma-54, DNA binding domain AM480_09420 PF04963 Sigma-54 factor, core binding domain AM480_09425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM480_09430 PF01722 BolA-like protein AM480_09435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM480_09440 PF01634 ATP phosphoribosyltransferase AM480_09445 PF00815 Histidinol dehydrogenase AM480_09450 PF00155 Aminotransferase class I and II AM480_09455 PF00425 chorismate binding enzyme AM480_09455 PF04715 Anthranilate synthase component I, N terminal region AM480_09465 PF03412 Peptidase C39 family AM480_09475 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM480_09495 PF00293 NUDIX domain AM480_09495 PF14803 Nudix N-terminal AM480_09500 PF00293 NUDIX domain AM480_09505 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_09510 PF00814 Glycoprotease family AM480_09515 PF04445 Putative SAM-dependent methyltransferase AM480_09520 PF01650 Peptidase C13 family AM480_09525 PF00756 Putative esterase AM480_09530 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) AM480_09535 PF00834 Ribulose-phosphate 3 epimerase family AM480_09540 PF08282 haloacid dehalogenase-like hydrolase AM480_09550 PF00394 Multicopper oxidase AM480_09550 PF07731 Multicopper oxidase AM480_09550 PF07732 Multicopper oxidase AM480_09555 PF05275 AM480_09555 AM480_09560 PF01545 Cation efflux family AM480_09565 PF00893 Small Multidrug Resistance protein AM480_09570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM480_09570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM480_09575 PF01960 ArgJ family AM480_09580 PF02445 Quinolinate synthetase A protein AM480_09605 PF00962 Adenosine/AMP deaminase AM480_09610 PF00107 Zinc-binding dehydrogenase AM480_09610 PF08240 Alcohol dehydrogenase GroES-like domain AM480_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09615 PF03466 LysR substrate binding domain AM480_09620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_09620 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_09620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_09625 PF07690 Major Facilitator Superfamily AM480_09630 PF02515 CoA-transferase family III AM480_09640 PF00890 FAD binding domain AM480_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09645 PF03466 LysR substrate binding domain AM480_09650 PF13531 Bacterial extracellular solute-binding protein AM480_09655 PF07690 Major Facilitator Superfamily AM480_09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09665 PF03466 LysR substrate binding domain AM480_09670 PF14491 AM480_09670 AM480_09675 PF13175 AAA ATPase domain AM480_09685 PF08908 AM480_09685 AM480_09690 PF01717 Cobalamin-independent synthase, Catalytic domain AM480_09695 PF01613 Flavin reductase like domain AM480_09705 PF00440 Bacterial regulatory proteins, tetR family AM480_09710 PF04471 Restriction endonuclease AM480_09710 PF06114 Domain of unknown function (DUF955) AM480_09715 PF17074 AM480_09715 AM480_09725 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AM480_09730 PF17074 AM480_09730 AM480_09735 PF00440 Bacterial regulatory proteins, tetR family AM480_09750 PF00665 Integrase core domain AM480_09750 PF13936 Helix-turn-helix domain AM480_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09760 PF03466 LysR substrate binding domain AM480_09765 PF02567 Phenazine biosynthesis-like protein AM480_09775 PF00268 Ribonucleotide reductase, small chain AM480_09785 PF00317 Ribonucleotide reductase, all-alpha domain AM480_09785 PF02867 Ribonucleotide reductase, barrel domain AM480_09785 PF03477 ATP cone domain AM480_09795 PF00072 Response regulator receiver domain AM480_09795 PF00486 Transcriptional regulatory protein, C terminal AM480_09800 PF00512 His Kinase A (phospho-acceptor) domain AM480_09800 PF00672 HAMP domain AM480_09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_09810 PF00990 GGDEF domain AM480_09815 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM480_09820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM480_09825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM480_09825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM480_09830 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AM480_09835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM480_09835 PF10531 SLBB domain AM480_09835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM480_09840 PF00384 Molybdopterin oxidoreductase AM480_09840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM480_09840 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM480_09840 PF13510 2Fe-2S iron-sulfur cluster binding domain AM480_09845 PF00146 NADH dehydrogenase AM480_09850 PF12838 4Fe-4S dicluster domain AM480_09855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM480_09860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM480_09865 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM480_09865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM480_09870 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM480_09875 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM480_09880 PF14681 Uracil phosphoribosyltransferase AM480_09885 PF00313 'Cold-shock' DNA-binding domain AM480_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_09890 PF03466 LysR substrate binding domain AM480_09895 PF00175 Oxidoreductase NAD-binding domain AM480_09895 PF00970 Oxidoreductase FAD-binding domain AM480_09910 PF05552 Conserved TM helix AM480_09920 PF03486 HI0933-like protein AM480_09925 PF00291 Pyridoxal-phosphate dependent enzyme AM480_09930 PF13437 HlyD family secretion protein AM480_09930 PF13533 Biotin-lipoyl like AM480_09935 PF07690 Major Facilitator Superfamily AM480_09940 PF00440 Bacterial regulatory proteins, tetR family AM480_09945 PF01810 AM480_09945 AM480_09955 PF01588 Putative tRNA binding domain AM480_09955 PF08264 Anticodon-binding domain of tRNA AM480_09955 PF09334 tRNA synthetases class I (M) AM480_09965 PF10609 ParA/MinD ATPase like AM480_09975 PF01048 Phosphorylase superfamily AM480_09980 PF09835 AM480_09980 AM480_09985 PF01810 AM480_09985 AM480_09990 PF00692 dUTPase AM480_10025 PF01207 Dihydrouridine synthase (Dus) AM480_10030 PF01578 AM480_10030 AM480_10035 PF00448 SRP54-type protein, GTPase domain AM480_10035 PF02881 SRP54-type protein, helical bundle domain AM480_10035 PF02978 Signal peptide binding domain AM480_10040 PF03309 Type III pantothenate kinase AM480_10045 PF03099 Biotin/lipoate A/B protein ligase family AM480_10050 PF01925 AM480_10050 AM480_10055 PF00392 Bacterial regulatory proteins, gntR family AM480_10055 PF07729 FCD domain AM480_10060 PF02463 RecF/RecN/SMC N terminal domain AM480_10065 PF04354 ZipA, C-terminal FtsZ-binding domain AM480_10070 PF00533 BRCA1 C Terminus (BRCT) domain AM480_10070 PF01653 NAD-dependent DNA ligase adenylation domain AM480_10070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM480_10070 PF03120 NAD-dependent DNA ligase OB-fold domain AM480_10070 PF12826 Helix-hairpin-helix motif AM480_10070 PF14520 Helix-hairpin-helix domain AM480_10075 PF00210 Ferritin-like domain AM480_10080 PF07690 Major Facilitator Superfamily AM480_10085 PF00982 Glycosyltransferase family 20 AM480_10090 PF02358 Trehalose-phosphatase AM480_10095 PF12697 Alpha/beta hydrolase family AM480_10100 PF00202 Aminotransferase class-III AM480_10105 PF00155 Aminotransferase class I and II AM480_10110 PF13489 Methyltransferase domain AM480_10115 PF13500 AAA domain AM480_10120 PF00849 RNA pseudouridylate synthase AM480_10120 PF01479 S4 domain AM480_10125 PF04079 Putative transcriptional regulators (Ypuh-like) AM480_10130 PF02616 ScpA/B protein AM480_10135 PF01300 Telomere recombination AM480_10140 PF04315 AM480_10140 AM480_10145 PF02620 AM480_10145 AM480_10150 PF01783 Ribosomal L32p protein family AM480_10155 PF00698 Acyl transferase domain AM480_10160 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_10165 PF00550 Phosphopantetheine attachment site AM480_10170 PF01476 LysM domain AM480_10170 PF04972 BON domain AM480_10175 PF08543 Phosphomethylpyrimidine kinase AM480_10180 PF13419 Haloacid dehalogenase-like hydrolase AM480_10185 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM480_10190 PF09925 AM480_10190 AM480_10190 PF14351 AM480_10190 AM480_10195 PF14345 AM480_10195 AM480_10200 PF02261 Aspartate decarboxylase AM480_10205 PF01195 Peptidyl-tRNA hydrolase AM480_10210 PF01386 Ribosomal L25p family AM480_10215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM480_10215 PF14572 Phosphoribosyl synthetase-associated domain AM480_10240 PF00288 GHMP kinases N terminal domain AM480_10240 PF08544 GHMP kinases C terminal AM480_10245 PF03550 Outer membrane lipoprotein LolB AM480_10250 PF13181 Tetratricopeptide repeat AM480_10250 PF13432 Tetratricopeptide repeat AM480_10250 PF14559 Tetratricopeptide repeat AM480_10255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM480_10255 PF01488 Shikimate / quinate 5-dehydrogenase AM480_10255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM480_10260 PF01807 CHC2 zinc finger AM480_10260 PF08275 DNA primase catalytic core, N-terminal domain AM480_10260 PF10410 DnaB-helicase binding domain of primase AM480_10260 PF13662 Toprim domain AM480_10265 PF13525 Outer membrane lipoprotein AM480_10270 PF00849 RNA pseudouridylate synthase AM480_10270 PF01479 S4 domain AM480_10275 PF02578 Multi-copper polyphenol oxidoreductase laccase AM480_10280 PF03358 NADPH-dependent FMN reductase AM480_10285 PF01668 SmpB protein AM480_10290 PF05930 Prophage CP4-57 regulatory protein (AlpA) AM480_10330 PF04448 AM480_10330 AM480_10360 PF00665 Integrase core domain AM480_10360 PF13936 Helix-turn-helix domain AM480_10370 PF00717 Peptidase S24-like AM480_10370 PF01381 Helix-turn-helix AM480_10375 PF14549 DNA-binding transcriptional regulator Cro AM480_10385 PF04492 AM480_10385 AM480_10390 PF00772 DnaB-like helicase N terminal domain AM480_10390 PF03796 DnaB-like helicase C terminal domain AM480_10425 PF08774 VRR-NUC domain AM480_10430 PF00149 Calcineurin-like phosphoesterase AM480_10465 PF03237 Terminase-like family AM480_10465 PF17289 AM480_10465 AM480_10470 PF13264 AM480_10470 AM480_10475 PF04233 AM480_10475 AM480_10520 PF13554 Bacteriophage related domain of unknown function AM480_10525 PF09669 AM480_10525 AM480_10555 PF06120 AM480_10555 AM480_10565 PF05939 AM480_10565 AM480_10575 PF05100 AM480_10575 AM480_10580 PF00877 NlpC/P60 family AM480_10580 PF14464 Prokaryotic homologs of the JAB domain AM480_10585 PF06805 AM480_10585 AM480_10600 PF05838 Glycosyl hydrolase 108 AM480_10600 PF09374 Predicted Peptidoglycan domain AM480_10610 PF00589 Phage integrase family AM480_10610 PF13356 Domain of unknown function (DUF4102) AM480_10615 PF01467 Cytidylyltransferase AM480_10620 PF00037 4Fe-4S binding domain AM480_10635 PF07396 Phosphate-selective porin O and P AM480_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_10640 PF03466 LysR substrate binding domain AM480_10645 PF00180 Isocitrate/isopropylmalate dehydrogenase AM480_10650 PF02028 BCCT family transporter AM480_10655 PF07859 alpha/beta hydrolase fold AM480_10660 PF00355 Rieske [2Fe-2S] domain AM480_10660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM480_10665 PF00171 Aldehyde dehydrogenase family AM480_10670 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_10670 PF00175 Oxidoreductase NAD-binding domain AM480_10670 PF00970 Oxidoreductase FAD-binding domain AM480_10685 PF00795 Carbon-nitrogen hydrolase AM480_10685 PF02540 NAD synthase AM480_10695 PF02678 Pirin AM480_10695 PF05726 Pirin C-terminal cupin domain AM480_10700 PF03653 AM480_10700 AM480_10705 PF00109 Beta-ketoacyl synthase, N-terminal domain AM480_10705 PF02801 Beta-ketoacyl synthase, C-terminal domain AM480_10710 PF12787 AM480_10710 AM480_10715 PF00164 Ribosomal protein S12/S23 AM480_10720 PF00177 Ribosomal protein S7p/S5e AM480_10725 PF00009 Elongation factor Tu GTP binding domain AM480_10725 PF00679 Elongation factor G C-terminus AM480_10725 PF03144 Elongation factor Tu domain 2 AM480_10725 PF03764 Elongation factor G, domain IV AM480_10725 PF14492 Elongation Factor G, domain II AM480_10730 PF00009 Elongation factor Tu GTP binding domain AM480_10730 PF03143 Elongation factor Tu C-terminal domain AM480_10730 PF03144 Elongation factor Tu domain 2 AM480_10735 PF00589 Phage integrase family AM480_10750 PF02498 AM480_10750 AM480_10780 PF00717 Peptidase S24-like AM480_10795 PF07120 AM480_10795 AM480_10800 PF00772 DnaB-like helicase N terminal domain AM480_10800 PF03796 DnaB-like helicase C terminal domain AM480_10855 PF01844 HNH endonuclease AM480_10865 PF03354 AM480_10865 AM480_10870 PF04586 AM480_10870 AM480_10875 PF05065 Phage capsid family AM480_10885 PF04860 Phage portal protein AM480_10890 PF05135 Phage gp6-like head-tail connector protein AM480_10895 PF05521 Phage head-tail joining protein AM480_10900 PF04883 AM480_10900 AM480_10915 PF16459 AM480_10915 AM480_10930 PF01464 Transglycosylase SLT domain AM480_10940 PF05939 AM480_10940 AM480_10950 PF05100 AM480_10950 AM480_10955 PF00877 NlpC/P60 family AM480_10955 PF14464 Prokaryotic homologs of the JAB domain AM480_10960 PF06805 AM480_10960 AM480_10975 PF05838 Glycosyl hydrolase 108 AM480_10975 PF09374 Predicted Peptidoglycan domain AM480_10985 PF00589 Phage integrase family AM480_10985 PF13356 Domain of unknown function (DUF4102) AM480_10990 PF01467 Cytidylyltransferase AM480_10995 PF00037 4Fe-4S binding domain AM480_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_11015 PF03466 LysR substrate binding domain AM480_11020 PF00180 Isocitrate/isopropylmalate dehydrogenase AM480_11025 PF02028 BCCT family transporter AM480_11030 PF07859 alpha/beta hydrolase fold AM480_11035 PF00355 Rieske [2Fe-2S] domain AM480_11035 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM480_11040 PF00171 Aldehyde dehydrogenase family AM480_11045 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_11045 PF00175 Oxidoreductase NAD-binding domain AM480_11045 PF00970 Oxidoreductase FAD-binding domain AM480_11060 PF00795 Carbon-nitrogen hydrolase AM480_11060 PF02540 NAD synthase AM480_11070 PF02678 Pirin AM480_11070 PF05726 Pirin C-terminal cupin domain AM480_11075 PF03653 AM480_11075 AM480_11080 PF00109 Beta-ketoacyl synthase, N-terminal domain AM480_11080 PF02801 Beta-ketoacyl synthase, C-terminal domain AM480_11085 PF12787 AM480_11085 AM480_11090 PF00164 Ribosomal protein S12/S23 AM480_11095 PF00177 Ribosomal protein S7p/S5e AM480_11100 PF00009 Elongation factor Tu GTP binding domain AM480_11100 PF00679 Elongation factor G C-terminus AM480_11100 PF03144 Elongation factor Tu domain 2 AM480_11100 PF03764 Elongation factor G, domain IV AM480_11100 PF14492 Elongation Factor G, domain II AM480_11105 PF00009 Elongation factor Tu GTP binding domain AM480_11105 PF03143 Elongation factor Tu C-terminal domain AM480_11105 PF03144 Elongation factor Tu domain 2 AM480_11110 PF00589 Phage integrase family AM480_11125 PF02498 AM480_11125 AM480_11155 PF00717 Peptidase S24-like AM480_11170 PF07120 AM480_11170 AM480_11175 PF00772 DnaB-like helicase N terminal domain AM480_11175 PF03796 DnaB-like helicase C terminal domain AM480_11230 PF01844 HNH endonuclease AM480_11240 PF03354 AM480_11240 AM480_11245 PF04586 AM480_11245 AM480_11250 PF05065 Phage capsid family AM480_11260 PF04860 Phage portal protein AM480_11265 PF05135 Phage gp6-like head-tail connector protein AM480_11270 PF05521 Phage head-tail joining protein AM480_11275 PF04883 AM480_11275 AM480_11280 PF11367 Protein of unknown function (DUF3168) AM480_11285 PF16460 AM480_11285 AM480_11290 PF16459 AM480_11290 AM480_11305 PF01464 Transglycosylase SLT domain AM480_11315 PF05939 AM480_11315 AM480_11325 PF05100 AM480_11325 AM480_11330 PF00877 NlpC/P60 family AM480_11330 PF14464 Prokaryotic homologs of the JAB domain AM480_11335 PF06805 AM480_11335 AM480_11350 PF05838 Glycosyl hydrolase 108 AM480_11350 PF09374 Predicted Peptidoglycan domain AM480_11360 PF10118 AM480_11360 AM480_11365 PF10118 AM480_11365 AM480_11370 PF00583 Acetyltransferase (GNAT) family AM480_11375 PF04376 AM480_11375 AM480_11375 PF04377 AM480_11375 AM480_11380 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM480_11385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_11390 PF01580 FtsK/SpoIIIE family AM480_11390 PF09397 Ftsk gamma domain AM480_11390 PF13491 AM480_11390 AM480_11395 PF01810 AM480_11395 AM480_11405 PF03776 Septum formation topological specificity factor MinE AM480_11410 PF13614 AAA domain AM480_11415 PF03775 Septum formation inhibitor MinC, C-terminal domain AM480_11425 PF01553 Acyltransferase AM480_11430 PF00691 OmpA family AM480_11435 PF00580 UvrD/REP helicase N-terminal domain AM480_11435 PF13361 UvrD-like helicase C-terminal domain AM480_11440 PF00692 dUTPase AM480_11445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM480_11445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM480_11445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM480_11450 PF00696 Amino acid kinase family AM480_11455 PF13444 Acetyltransferase (GNAT) domain AM480_11460 PF13230 Glutamine amidotransferases class-II AM480_11465 PF01814 Hemerythrin HHE cation binding domain AM480_11480 PF03658 RnfH family Ubiquitin AM480_11485 PF04355 SmpA / OmlA family AM480_11490 PF01475 Ferric uptake regulator family AM480_11495 PF00437 Type II/IV secretion system protein AM480_11500 PF00437 Type II/IV secretion system protein AM480_11505 PF01168 Alanine racemase, N-terminal domain AM480_11510 PF13476 AAA domain AM480_11510 PF13558 Putative exonuclease SbcCD, C subunit AM480_11515 PF00149 Calcineurin-like phosphoesterase AM480_11515 PF12320 Type 5 capsule protein repressor C-terminal domain AM480_11520 PF02566 OsmC-like protein AM480_11535 PF01370 NAD dependent epimerase/dehydratase family AM480_11535 PF08338 Domain of unknown function (DUF1731) AM480_11540 PF01266 FAD dependent oxidoreductase AM480_11545 PF00490 Delta-aminolevulinic acid dehydratase AM480_11550 PF03061 Thioesterase superfamily AM480_11555 PF00529 HlyD family secretion protein AM480_11555 PF16576 AM480_11555 AM480_11560 PF07690 Major Facilitator Superfamily AM480_11565 PF01019 Gamma-glutamyltranspeptidase AM480_11575 PF01867 CRISPR associated protein Cas1 AM480_11580 PF09618 CRISPR-associated protein (Cas_Csy4) AM480_11585 PF09615 AM480_11585 AM480_11590 PF09614 AM480_11590 AM480_11605 PF14730 Domain of unknown function (DUF4468) with TBP-like fold AM480_11625 PF03573 outer membrane porin, OprD family AM480_11630 PF00083 Sugar (and other) transporter AM480_11635 PF00701 Dihydrodipicolinate synthetase family AM480_11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_11640 PF03466 LysR substrate binding domain AM480_11645 PF04542 Sigma-70 region 2 AM480_11645 PF08281 Sigma-70, region 4 AM480_11650 PF04773 FecR protein AM480_11650 PF16220 AM480_11650 AM480_11650 PF16344 AM480_11650 AM480_11655 PF00593 TonB dependent receptor AM480_11655 PF07660 Secretin and TonB N terminus short domain AM480_11655 PF07715 TonB-dependent Receptor Plug Domain AM480_11660 PF01298 Transferrin binding protein-like solute binding protein AM480_11665 PF04575 AM480_11665 AM480_11670 PF03544 Gram-negative bacterial TonB protein C-terminal AM480_11675 PF01126 Heme oxygenase AM480_11680 PF04304 AM480_11680 AM480_11690 PF06912 AM480_11690 AM480_11695 PF07819 PGAP1-like protein AM480_11700 PF13520 Amino acid permease AM480_11705 PF02574 Homocysteine S-methyltransferase AM480_11715 PF06039 AM480_11715 AM480_11720 PF00732 GMC oxidoreductase AM480_11720 PF05199 GMC oxidoreductase AM480_11725 PF00171 Aldehyde dehydrogenase family AM480_11730 PF00440 Bacterial regulatory proteins, tetR family AM480_11730 PF13977 Bacterial transcriptional repressor AM480_11735 PF02028 BCCT family transporter AM480_11740 PF02028 BCCT family transporter AM480_11745 PF01914 AM480_11745 AM480_11750 PF03061 Thioesterase superfamily AM480_11760 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM480_11765 PF00375 Sodium:dicarboxylate symporter family AM480_11770 PF07152 YaeQ protein AM480_11775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM480_11785 PF13641 Glycosyltransferase like family 2 AM480_11790 PF13994 AM480_11790 AM480_11795 PF00378 Enoyl-CoA hydratase/isomerase family AM480_11800 PF04973 AM480_11800 AM480_11810 PF01614 Bacterial transcriptional regulator AM480_11810 PF09339 IclR helix-turn-helix domain AM480_11815 PF00355 Rieske [2Fe-2S] domain AM480_11825 PF00355 Rieske [2Fe-2S] domain AM480_11830 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_11835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM480_11840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_11840 PF14759 Reductase C-terminal AM480_11845 PF07690 Major Facilitator Superfamily AM480_11850 PF07883 Cupin domain AM480_11855 PF12697 Alpha/beta hydrolase family AM480_11860 PF00106 short chain dehydrogenase AM480_11865 PF01958 Domain of unknown function DUF108 AM480_11865 PF03447 Homoserine dehydrogenase, NAD binding domain AM480_11870 PF00171 Aldehyde dehydrogenase family AM480_11875 PF00205 Thiamine pyrophosphate enzyme, central domain AM480_11875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM480_11875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM480_11885 PF07690 Major Facilitator Superfamily AM480_11890 PF01327 Polypeptide deformylase AM480_11895 PF04960 Glutaminase AM480_11900 PF12833 Helix-turn-helix domain AM480_11905 PF07690 Major Facilitator Superfamily AM480_11910 PF01263 Aldose 1-epimerase AM480_11925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_11925 PF03466 LysR substrate binding domain AM480_11930 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_11935 PF07690 Major Facilitator Superfamily AM480_11940 PF00456 Transketolase, thiamine diphosphate binding domain AM480_11945 PF02779 Transketolase, pyrimidine binding domain AM480_11945 PF02780 Transketolase, C-terminal domain AM480_11950 PF00809 Pterin binding enzyme AM480_11950 PF02310 B12 binding domain AM480_11950 PF02574 Homocysteine S-methyltransferase AM480_11950 PF02607 B12 binding domain AM480_11950 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM480_11955 PF01384 AM480_11955 AM480_11960 PF00291 Pyridoxal-phosphate dependent enzyme AM480_11975 PF03781 Sulfatase-modifying factor enzyme 1 AM480_11980 PF00884 Sulfatase AM480_11985 PF01694 Rhomboid family AM480_11990 PF01106 NifU-like domain AM480_11990 PF01521 Iron-sulphur cluster biosynthesis AM480_12005 PF00593 TonB dependent receptor AM480_12015 PF12697 Alpha/beta hydrolase family AM480_12020 PF00484 Carbonic anhydrase AM480_12025 PF13472 GDSL-like Lipase/Acylhydrolase family AM480_12030 PF00005 ABC transporter AM480_12035 PF02687 AM480_12035 AM480_12040 PF01694 Rhomboid family AM480_12045 PF00912 Transglycosylase AM480_12050 PF02503 Polyphosphate kinase middle domain AM480_12050 PF13089 Polyphosphate kinase N-terminal domain AM480_12050 PF13090 Polyphosphate kinase C-terminal domain AM480_12060 PF05036 Sporulation related domain AM480_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_12065 PF03466 LysR substrate binding domain AM480_12070 PF00561 alpha/beta hydrolase fold AM480_12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_12080 PF00301 Rubredoxin AM480_12085 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AM480_12090 PF05728 Uncharacterised protein family (UPF0227) AM480_12095 PF00152 tRNA synthetases class II (D, K and N) AM480_12095 PF01336 OB-fold nucleic acid binding domain AM480_12100 PF14052 Capsule assembly protein Wzi AM480_12110 PF01507 Phosphoadenosine phosphosulfate reductase family AM480_12115 PF00009 Elongation factor Tu GTP binding domain AM480_12120 PF09998 AM480_12120 AM480_12130 PF03600 Citrate transporter AM480_12140 PF00571 CBS domain AM480_12140 PF01595 AM480_12140 AM480_12140 PF03471 Transporter associated domain AM480_12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_12145 PF03466 LysR substrate binding domain AM480_12150 PF00463 Isocitrate lyase family AM480_12155 PF04170 NlpE N-terminal domain AM480_12165 PF01774 UreD urease accessory protein AM480_12170 PF00547 Urease, gamma subunit AM480_12175 PF00699 Urease beta subunit AM480_12180 PF13673 Acetyltransferase (GNAT) domain AM480_12185 PF00449 Urease alpha-subunit, N-terminal domain AM480_12185 PF01979 Amidohydrolase family AM480_12190 PF02814 UreE urease accessory protein, N-terminal domain AM480_12190 PF05194 UreE urease accessory protein, C-terminal domain AM480_12195 PF01730 UreF AM480_12200 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM480_12205 PF04955 AM480_12205 AM480_12210 PF03602 Conserved hypothetical protein 95 AM480_12215 PF00905 Penicillin binding protein transpeptidase domain AM480_12215 PF03717 Penicillin-binding Protein dimerisation domain AM480_12230 PF00406 Adenylate kinase AM480_12230 PF05191 Adenylate kinase, active site lid AM480_12240 PF00633 Helix-hairpin-helix motif AM480_12240 PF00730 HhH-GPD superfamily base excision DNA repair protein AM480_12240 PF10576 Iron-sulfur binding domain of endonuclease III AM480_12245 PF04060 Putative Fe-S cluster AM480_12245 PF14697 4Fe-4S dicluster domain AM480_12250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM480_12250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM480_12255 PF03724 META domain AM480_12255 PF14302 AM480_12255 AM480_12260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM480_12265 PF02590 Predicted SPOUT methyltransferase AM480_12270 PF00004 ATPase family associated with various cellular activities (AAA) AM480_12270 PF02190 ATP-dependent protease La (LON) domain AM480_12270 PF05362 Lon protease (S16) C-terminal proteolytic domain AM480_12275 PF03895 YadA-like C-terminal region AM480_12275 PF05658 Head domain of trimeric autotransporter adhesin AM480_12275 PF05662 Coiled stalk of trimeric autotransporter adhesin AM480_12275 PF13018 AM480_12275 AM480_12280 PF00691 OmpA family AM480_12280 PF04355 SmpA / OmlA family AM480_12285 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM480_12310 PF04448 AM480_12310 AM480_12325 PF13479 AM480_12325 AM480_12345 PF13619 AM480_12345 AM480_12360 PF00717 Peptidase S24-like AM480_12390 PF07120 AM480_12390 AM480_12430 PF04480 Protein of unknown function (DUF559) AM480_12465 PF00665 Integrase core domain AM480_12465 PF13936 Helix-turn-helix domain AM480_12485 PF10045 AM480_12485 AM480_12490 PF17289 AM480_12490 AM480_12495 PF13264 AM480_12495 AM480_12500 PF04233 AM480_12500 AM480_12530 PF10281 AM480_12530 AM480_12555 PF13554 Bacteriophage related domain of unknown function AM480_12565 PF08239 Bacterial SH3 domain AM480_12595 PF14076 AM480_12595 AM480_12600 PF12844 Helix-turn-helix domain AM480_12615 PF06120 AM480_12615 AM480_12630 PF08875 AM480_12630 AM480_12650 PF05838 Glycosyl hydrolase 108 AM480_12650 PF09374 Predicted Peptidoglycan domain AM480_12655 PF00593 TonB dependent receptor AM480_12655 PF07715 TonB-dependent Receptor Plug Domain AM480_12660 PF00884 Sulfatase AM480_12660 PF08019 AM480_12660 AM480_12670 PF00589 Phage integrase family AM480_12670 PF13356 Domain of unknown function (DUF4102) AM480_12680 PF05164 Cell division protein ZapA AM480_12690 PF03695 Uncharacterised protein family (UPF0149) AM480_12695 PF00557 Metallopeptidase family M24 AM480_12695 PF05195 Aminopeptidase P, N-terminal domain AM480_12700 PF01494 FAD binding domain AM480_12705 PF01494 FAD binding domain AM480_12715 PF13411 MerR HTH family regulatory protein AM480_12720 PF01545 Cation efflux family AM480_12725 PF01810 AM480_12725 AM480_12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_12730 PF03466 LysR substrate binding domain AM480_12740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM480_12745 PF02021 Uncharacterised protein family UPF0102 AM480_12750 PF04972 BON domain AM480_12755 PF07859 alpha/beta hydrolase fold AM480_12760 PF00293 NUDIX domain AM480_12760 PF09297 NADH pyrophosphatase zinc ribbon domain AM480_12770 PF00075 RNase H AM480_12770 PF00929 Exonuclease AM480_12775 PF01464 Transglycosylase SLT domain AM480_12775 PF01476 LysM domain AM480_12780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM480_12785 PF00528 Binding-protein-dependent transport system inner membrane component AM480_12790 PF00528 Binding-protein-dependent transport system inner membrane component AM480_12790 PF12911 AM480_12790 AM480_12795 PF00005 ABC transporter AM480_12800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM480_12805 PF00593 TonB dependent receptor AM480_12805 PF07715 TonB-dependent Receptor Plug Domain AM480_12815 PF00929 Exonuclease AM480_12820 PF01979 Amidohydrolase family AM480_12825 PF00990 GGDEF domain AM480_12830 PF00764 Arginosuccinate synthase AM480_12835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM480_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_12845 PF03180 NLPA lipoprotein AM480_12865 PF01337 Barstar (barnase inhibitor) AM480_12875 PF08857 Putative ParB-like nuclease AM480_12885 PF00440 Bacterial regulatory proteins, tetR family AM480_12890 PF05954 Phage late control gene D protein (GPD) AM480_12890 PF10106 AM480_12890 AM480_12890 PF13296 AM480_12890 AM480_12895 PF03527 AM480_12895 AM480_12895 PF05593 AM480_12895 AM480_12925 PF13086 AAA domain AM480_12925 PF13087 AAA domain AM480_12935 PF00324 Amino acid permease AM480_12940 PF01266 FAD dependent oxidoreductase AM480_12945 PF00324 Amino acid permease AM480_12950 PF02743 Cache domain AM480_12955 PF00392 Bacterial regulatory proteins, gntR family AM480_12955 PF07729 FCD domain AM480_12960 PF12680 SnoaL-like domain AM480_12965 PF00171 Aldehyde dehydrogenase family AM480_12970 PF01037 AsnC family AM480_12970 PF13404 AsnC-type helix-turn-helix domain AM480_12975 PF00202 Aminotransferase class-III AM480_12980 PF04958 Arginine N-succinyltransferase beta subunit AM480_12985 PF00324 Amino acid permease AM480_12990 PF00171 Aldehyde dehydrogenase family AM480_12995 PF12625 AM480_12995 AM480_12995 PF12833 Helix-turn-helix domain AM480_13005 PF00892 EamA-like transporter family AM480_13010 PF04295 AM480_13010 AM480_13010 PF08666 SAF domain AM480_13015 PF07690 Major Facilitator Superfamily AM480_13020 PF13378 Enolase C-terminal domain-like AM480_13025 PF00701 Dihydrodipicolinate synthetase family AM480_13030 PF00171 Aldehyde dehydrogenase family AM480_13035 PF00392 Bacterial regulatory proteins, gntR family AM480_13035 PF07729 FCD domain AM480_13045 PF13610 AM480_13045 AM480_13055 PF03061 Thioesterase superfamily AM480_13060 PF11578 Protein of unknown function (DUF3237) AM480_13065 PF03573 outer membrane porin, OprD family AM480_13070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_13070 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_13070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_13075 PF00501 AMP-binding enzyme AM480_13080 PF00171 Aldehyde dehydrogenase family AM480_13085 PF00378 Enoyl-CoA hydratase/isomerase family AM480_13090 PF07690 Major Facilitator Superfamily AM480_13095 PF01047 MarR family AM480_13100 PF00392 Bacterial regulatory proteins, gntR family AM480_13100 PF07729 FCD domain AM480_13105 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_13110 PF00355 Rieske [2Fe-2S] domain AM480_13115 PF03573 outer membrane porin, OprD family AM480_13120 PF03781 Sulfatase-modifying factor enzyme 1 AM480_13125 PF00884 Sulfatase AM480_13130 PF07690 Major Facilitator Superfamily AM480_13135 PF03573 outer membrane porin, OprD family AM480_13140 PF00732 GMC oxidoreductase AM480_13140 PF05199 GMC oxidoreductase AM480_13145 PF07859 alpha/beta hydrolase fold AM480_13150 PF00106 short chain dehydrogenase AM480_13155 PF00743 Flavin-binding monooxygenase-like AM480_13160 PF12625 AM480_13160 AM480_13160 PF12833 Helix-turn-helix domain AM480_13165 PF04072 Leucine carboxyl methyltransferase AM480_13170 PF13738 Pyridine nucleotide-disulphide oxidoreductase AM480_13175 PF00106 short chain dehydrogenase AM480_13180 PF10118 AM480_13180 AM480_13185 PF00440 Bacterial regulatory proteins, tetR family AM480_13190 PF02678 Pirin AM480_13195 PF10118 AM480_13195 AM480_13200 PF00106 short chain dehydrogenase AM480_13205 PF13738 Pyridine nucleotide-disulphide oxidoreductase AM480_13215 PF00860 Permease family AM480_13220 PF00962 Adenosine/AMP deaminase AM480_13225 PF01292 Prokaryotic cytochrome b561 AM480_13235 PF01351 Ribonuclease HII AM480_13240 PF02599 Global regulator protein family AM480_13245 PF00696 Amino acid kinase family AM480_13245 PF01842 ACT domain AM480_13245 PF13840 ACT domain AM480_13250 PF01411 tRNA synthetases class II (A) AM480_13250 PF02272 DHHA1 domain AM480_13250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM480_13255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM480_13255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM480_13260 PF13393 Histidyl-tRNA synthetase AM480_13265 PF00709 Adenylosuccinate synthetase AM480_13275 PF01435 Peptidase family M48 AM480_13280 PF00248 Aldo/keto reductase family AM480_13285 PF00027 Cyclic nucleotide-binding domain AM480_13285 PF00325 Bacterial regulatory proteins, crp family AM480_13290 PF02566 OsmC-like protein AM480_13295 PF00583 Acetyltransferase (GNAT) family AM480_13300 PF01551 Peptidase family M23 AM480_13305 PF00004 ATPase family associated with various cellular activities (AAA) AM480_13305 PF02861 Clp amino terminal domain AM480_13305 PF07724 AAA domain (Cdc48 subfamily) AM480_13305 PF10431 C-terminal, D2-small domain, of ClpB protein AM480_13310 PF02464 Competence-damaged protein AM480_13320 PF01170 Putative RNA methylase family UPF0020 AM480_13320 PF02926 THUMP domain AM480_13320 PF10672 S-adenosylmethionine-dependent methyltransferase AM480_13330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM480_13330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM480_13340 PF00691 OmpA family AM480_13345 PF03807 NADP oxidoreductase coenzyme F420-dependent AM480_13345 PF10728 Domain of unknown function (DUF2520) AM480_13350 PF00043 Glutathione S-transferase, C-terminal domain AM480_13350 PF02798 Glutathione S-transferase, N-terminal domain AM480_13355 PF02390 Putative methyltransferase AM480_13360 PF00932 Lamin Tail Domain AM480_13365 PF00043 Glutathione S-transferase, C-terminal domain AM480_13365 PF02798 Glutathione S-transferase, N-terminal domain AM480_13375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_13375 PF13192 Thioredoxin domain AM480_13380 PF07866 Protein of unknown function (DUF1653) AM480_13385 PF01596 O-methyltransferase AM480_13390 PF13619 AM480_13390 AM480_13395 PF00578 AhpC/TSA family AM480_13395 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM480_13400 PF00270 DEAD/DEAH box helicase AM480_13400 PF00271 Helicase conserved C-terminal domain AM480_13400 PF04408 Helicase associated domain (HA2) AM480_13400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM480_13400 PF11898 AM480_13400 AM480_13405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM480_13405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM480_13410 PF03573 outer membrane porin, OprD family AM480_13415 PF07690 Major Facilitator Superfamily AM480_13420 PF03594 AM480_13420 AM480_13425 PF00106 short chain dehydrogenase AM480_13430 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_13430 PF00175 Oxidoreductase NAD-binding domain AM480_13430 PF00970 Oxidoreductase FAD-binding domain AM480_13435 PF00866 Ring hydroxylating beta subunit AM480_13440 PF00355 Rieske [2Fe-2S] domain AM480_13440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM480_13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_13445 PF03466 LysR substrate binding domain AM480_13450 PF13557 AM480_13450 AM480_13455 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_13455 PF00175 Oxidoreductase NAD-binding domain AM480_13455 PF00970 Oxidoreductase FAD-binding domain AM480_13460 PF04663 Phenol hydroxylase conserved region AM480_13465 PF02332 Methane/Phenol/Toluene Hydroxylase AM480_13465 PF04945 YHS domain AM480_13470 PF02406 MmoB/DmpM family AM480_13475 PF02332 Methane/Phenol/Toluene Hydroxylase AM480_13480 PF06099 AM480_13480 AM480_13485 PF00158 Sigma-54 interaction domain AM480_13485 PF02830 V4R domain AM480_13485 PF02954 Bacterial regulatory protein, Fis family AM480_13485 PF06505 AM480_13485 AM480_13490 PF00403 Heavy-metal-associated domain AM480_13495 PF00122 E1-E2 ATPase AM480_13495 PF00403 Heavy-metal-associated domain AM480_13495 PF00702 haloacid dehalogenase-like hydrolase AM480_13500 PF00376 MerR family regulatory protein AM480_13500 PF09278 MerR, DNA binding AM480_13505 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_13510 PF03860 Domain of Unknown Function (DUF326) AM480_13525 PF01810 AM480_13525 AM480_13535 PF02609 Exonuclease VII small subunit AM480_13565 PF00717 Peptidase S24-like AM480_13565 PF12844 Helix-turn-helix domain AM480_13580 PF05838 Glycosyl hydrolase 108 AM480_13580 PF09374 Predicted Peptidoglycan domain AM480_13585 PF01810 AM480_13585 AM480_13590 PF00313 'Cold-shock' DNA-binding domain AM480_13600 PF03807 NADP oxidoreductase coenzyme F420-dependent AM480_13600 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM480_13620 PF04233 AM480_13620 AM480_13625 PF07690 Major Facilitator Superfamily AM480_13630 PF01638 HxlR-like helix-turn-helix AM480_13640 PF09374 Predicted Peptidoglycan domain AM480_13645 PF13628 AM480_13645 AM480_13665 PF01406 tRNA synthetases class I (C) catalytic domain AM480_13665 PF09190 DALR domain AM480_13670 PF00571 CBS domain AM480_13670 PF01380 SIS domain AM480_13675 PF08282 haloacid dehalogenase-like hydrolase AM480_13680 PF06835 Lipopolysaccharide-assembly, LptC-related AM480_13685 PF03968 OstA-like protein AM480_13690 PF00005 ABC transporter AM480_13690 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM480_13695 PF02321 Outer membrane efflux protein AM480_13700 PF00005 ABC transporter AM480_13700 PF00664 ABC transporter transmembrane region AM480_13705 PF13437 HlyD family secretion protein AM480_13705 PF13533 Biotin-lipoyl like AM480_13710 PF01205 Uncharacterized protein family UPF0029 AM480_13710 PF09186 Domain of unknown function (DUF1949) AM480_13715 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_13715 PF14602 Hexapeptide repeat of succinyl-transferase AM480_13720 PF00582 Universal stress protein family AM480_13725 PF01596 O-methyltransferase AM480_13730 PF08291 Peptidase M15 AM480_13735 PF00037 4Fe-4S binding domain AM480_13735 PF11953 Domain of unknown function (DUF3470) AM480_13740 PF13673 Acetyltransferase (GNAT) domain AM480_13745 PF00488 MutS domain V AM480_13745 PF01624 MutS domain I AM480_13745 PF05188 MutS domain II AM480_13745 PF05190 MutS family domain IV AM480_13745 PF05192 MutS domain III AM480_13750 PF01037 AsnC family AM480_13750 PF13404 AsnC-type helix-turn-helix domain AM480_13755 PF00892 EamA-like transporter family AM480_13760 PF00563 EAL domain AM480_13765 PF03279 AM480_13765 AM480_13775 PF00440 Bacterial regulatory proteins, tetR family AM480_13780 PF07690 Major Facilitator Superfamily AM480_13785 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AM480_13790 PF00665 Integrase core domain AM480_13790 PF13936 Helix-turn-helix domain AM480_13800 PF01965 DJ-1/PfpI family AM480_13800 PF12833 Helix-turn-helix domain AM480_13805 PF12697 Alpha/beta hydrolase family AM480_13810 PF02525 Flavodoxin-like fold AM480_13820 PF05229 AM480_13820 AM480_13825 PF07739 TipAS antibiotic-recognition domain AM480_13825 PF13411 MerR HTH family regulatory protein AM480_13830 PF08856 AM480_13830 AM480_13835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM480_13835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM480_13855 PF13354 Beta-lactamase enzyme family AM480_13865 PF05954 Phage late control gene D protein (GPD) AM480_13865 PF10106 AM480_13865 AM480_13865 PF13296 AM480_13865 AM480_13870 PF03527 AM480_13870 AM480_13870 PF05593 AM480_13870 AM480_13870 PF14431 AM480_13870 AM480_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_13910 PF03466 LysR substrate binding domain AM480_13915 PF01566 AM480_13915 AM480_13920 PF03746 LamB/YcsF family AM480_13925 PF07286 Protein of unknown function (DUF1445) AM480_13930 PF02626 Allophanate hydrolase subunit 2 AM480_13930 PF02682 Allophanate hydrolase subunit 1 AM480_13935 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM480_13935 PF00364 Biotin-requiring enzyme AM480_13935 PF02785 Biotin carboxylase C-terminal domain AM480_13935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_13940 PF00654 Voltage gated chloride channel AM480_13945 PF08238 Sel1 repeat AM480_13955 PF00440 Bacterial regulatory proteins, tetR family AM480_13960 PF10604 Polyketide cyclase / dehydrase and lipid transport AM480_13965 PF08240 Alcohol dehydrogenase GroES-like domain AM480_13965 PF13823 Alcohol dehydrogenase GroES-associated AM480_13970 PF09347 Domain of unknown function (DUF1989) AM480_13975 PF09347 Domain of unknown function (DUF1989) AM480_13980 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM480_13980 PF00364 Biotin-requiring enzyme AM480_13980 PF02626 Allophanate hydrolase subunit 2 AM480_13980 PF02682 Allophanate hydrolase subunit 1 AM480_13980 PF02785 Biotin carboxylase C-terminal domain AM480_13980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_13985 PF02525 Flavodoxin-like fold AM480_13990 PF01638 HxlR-like helix-turn-helix AM480_14000 PF08753 NikR C terminal nickel binding domain AM480_14005 PF01425 Amidase AM480_14010 PF09084 NMT1/THI5 like AM480_14015 PF00005 ABC transporter AM480_14020 PF00528 Binding-protein-dependent transport system inner membrane component AM480_14045 PF05943 AM480_14045 AM480_14050 PF05638 Protein of unknown function (DUF796) AM480_14055 PF04965 Gene 25-like lysozyme AM480_14060 PF05947 AM480_14060 AM480_14065 PF06996 AM480_14065 AM480_14075 PF06744 AM480_14075 AM480_14075 PF06761 AM480_14075 AM480_14075 PF14331 AM480_14075 AM480_14080 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AM480_14085 PF00691 OmpA family AM480_14090 PF05488 PAAR motif AM480_14095 PF00004 ATPase family associated with various cellular activities (AAA) AM480_14095 PF07724 AAA domain (Cdc48 subfamily) AM480_14095 PF10431 C-terminal, D2-small domain, of ClpB protein AM480_14100 PF06812 AM480_14100 AM480_14105 PF05936 AM480_14105 AM480_14110 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AM480_14120 PF13539 D-alanyl-D-alanine carboxypeptidase AM480_14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14125 PF03466 LysR substrate binding domain AM480_14130 PF12796 Ankyrin repeats (3 copies) AM480_14135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM480_14145 PF06224 AM480_14145 AM480_14150 PF00583 Acetyltransferase (GNAT) family AM480_14155 PF02677 AM480_14155 AM480_14165 PF00376 MerR family regulatory protein AM480_14165 PF09278 MerR, DNA binding AM480_14170 PF03891 AM480_14170 AM480_14170 PF11720 Peptidase inhibitor I78 family AM480_14180 PF00701 Dihydrodipicolinate synthetase family AM480_14185 PF00892 EamA-like transporter family AM480_14190 PF00392 Bacterial regulatory proteins, gntR family AM480_14190 PF07729 FCD domain AM480_14195 PF05544 Proline racemase AM480_14200 PF01266 FAD dependent oxidoreductase AM480_14205 PF13510 2Fe-2S iron-sulfur cluster binding domain AM480_14210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_14215 PF08448 PAS fold AM480_14215 PF12833 Helix-turn-helix domain AM480_14220 PF00083 Sugar (and other) transporter AM480_14225 PF00171 Aldehyde dehydrogenase family AM480_14230 PF13520 Amino acid permease AM480_14235 PF03313 AM480_14235 AM480_14235 PF03315 Serine dehydratase beta chain AM480_14240 PF00171 Aldehyde dehydrogenase family AM480_14240 PF01575 MaoC like domain AM480_14245 PF05138 Phenylacetic acid catabolic protein AM480_14250 PF06243 Phenylacetic acid degradation B AM480_14255 PF05138 Phenylacetic acid catabolic protein AM480_14260 PF01883 Domain of unknown function DUF59 AM480_14265 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_14265 PF00175 Oxidoreductase NAD-binding domain AM480_14265 PF00970 Oxidoreductase FAD-binding domain AM480_14270 PF00378 Enoyl-CoA hydratase/isomerase family AM480_14275 PF00378 Enoyl-CoA hydratase/isomerase family AM480_14280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM480_14280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM480_14285 PF00108 Thiolase, N-terminal domain AM480_14285 PF02803 Thiolase, C-terminal domain AM480_14290 PF00501 AMP-binding enzyme AM480_14290 PF14535 AMP-binding enzyme C-terminal domain AM480_14295 PF07848 PaaX-like protein AM480_14295 PF08223 PaaX-like protein C-terminal domain AM480_14300 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_14305 PF03061 Thioesterase superfamily AM480_14310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM480_14325 PF00440 Bacterial regulatory proteins, tetR family AM480_14335 PF00199 Catalase AM480_14340 PF01292 Prokaryotic cytochrome b561 AM480_14345 PF07045 Protein of unknown function (DUF1330) AM480_14350 PF00392 Bacterial regulatory proteins, gntR family AM480_14350 PF07729 FCD domain AM480_14355 PF06684 Amino acid synthesis AM480_14360 PF12697 Alpha/beta hydrolase family AM480_14365 PF01613 Flavin reductase like domain AM480_14370 PF00296 Luciferase-like monooxygenase AM480_14375 PF00171 Aldehyde dehydrogenase family AM480_14385 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM480_14395 PF00171 Aldehyde dehydrogenase family AM480_14400 PF02627 Carboxymuconolactone decarboxylase family AM480_14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14405 PF03466 LysR substrate binding domain AM480_14410 PF02525 Flavodoxin-like fold AM480_14415 PF01614 Bacterial transcriptional regulator AM480_14415 PF09339 IclR helix-turn-helix domain AM480_14420 PF01494 FAD binding domain AM480_14425 PF00392 Bacterial regulatory proteins, gntR family AM480_14425 PF07702 UTRA domain AM480_14430 PF13343 Bacterial extracellular solute-binding protein AM480_14435 PF00005 ABC transporter AM480_14440 PF00528 Binding-protein-dependent transport system inner membrane component AM480_14445 PF01266 FAD dependent oxidoreductase AM480_14450 PF00266 Aminotransferase class-V AM480_14455 PF13419 Haloacid dehalogenase-like hydrolase AM480_14460 PF07690 Major Facilitator Superfamily AM480_14465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_14465 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_14465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_14470 PF02515 CoA-transferase family III AM480_14475 PF01614 Bacterial transcriptional regulator AM480_14475 PF09339 IclR helix-turn-helix domain AM480_14480 PF00378 Enoyl-CoA hydratase/isomerase family AM480_14485 PF03060 Nitronate monooxygenase AM480_14495 PF02543 Carbamoyltransferase AM480_14495 PF16861 AM480_14495 AM480_14500 PF01810 AM480_14500 AM480_14505 PF14518 Iron-containing redox enzyme AM480_14510 PF01614 Bacterial transcriptional regulator AM480_14510 PF09339 IclR helix-turn-helix domain AM480_14515 PF00108 Thiolase, N-terminal domain AM480_14515 PF02803 Thiolase, C-terminal domain AM480_14520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM480_14520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM480_14525 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_14530 PF00378 Enoyl-CoA hydratase/isomerase family AM480_14535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_14535 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_14535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_14540 PF07690 Major Facilitator Superfamily AM480_14545 PF01144 Coenzyme A transferase AM480_14550 PF01144 Coenzyme A transferase AM480_14560 PF07690 Major Facilitator Superfamily AM480_14565 PF03061 Thioesterase superfamily AM480_14570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_14570 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_14570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_14570 PF12418 AM480_14570 AM480_14570 PF12806 AM480_14570 AM480_14575 PF13622 Thioesterase-like superfamily AM480_14580 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM480_14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14585 PF03466 LysR substrate binding domain AM480_14590 PF00682 HMGL-like AM480_14595 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM480_14595 PF00364 Biotin-requiring enzyme AM480_14595 PF02785 Biotin carboxylase C-terminal domain AM480_14595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_14600 PF00378 Enoyl-CoA hydratase/isomerase family AM480_14605 PF01039 Carboxyl transferase domain AM480_14610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_14610 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_14610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_14615 PF00440 Bacterial regulatory proteins, tetR family AM480_14620 PF00501 AMP-binding enzyme AM480_14620 PF13193 AMP-binding enzyme C-terminal domain AM480_14625 PF13649 Methyltransferase domain AM480_14635 PF13472 GDSL-like Lipase/Acylhydrolase family AM480_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14640 PF03466 LysR substrate binding domain AM480_14670 PF02464 Competence-damaged protein AM480_14675 PF14518 Iron-containing redox enzyme AM480_14680 PF00199 Catalase AM480_14680 PF06628 Catalase-related immune-responsive AM480_14685 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_14695 PF10685 AM480_14695 AM480_14705 PF00717 Peptidase S24-like AM480_14710 PF01810 AM480_14710 AM480_14715 PF01037 AsnC family AM480_14715 PF13412 Winged helix-turn-helix DNA-binding AM480_14725 PF00072 Response regulator receiver domain AM480_14725 PF00512 His Kinase A (phospho-acceptor) domain AM480_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_14730 PF00072 Response regulator receiver domain AM480_14730 PF00196 Bacterial regulatory proteins, luxR family AM480_14735 PF14542 GCN5-related N-acetyl-transferase AM480_14745 PF00528 Binding-protein-dependent transport system inner membrane component AM480_14750 PF00528 Binding-protein-dependent transport system inner membrane component AM480_14755 PF00005 ABC transporter AM480_14760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM480_14765 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM480_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14775 PF03466 LysR substrate binding domain AM480_14780 PF01810 AM480_14780 AM480_14790 PF00266 Aminotransferase class-V AM480_14800 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_14800 PF06426 Serine acetyltransferase, N-terminal AM480_14805 PF00581 Rhodanese-like domain AM480_14810 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14815 PF03466 LysR substrate binding domain AM480_14820 PF00043 Glutathione S-transferase, C-terminal domain AM480_14820 PF02798 Glutathione S-transferase, N-terminal domain AM480_14825 PF13417 Glutathione S-transferase, N-terminal domain AM480_14825 PF14834 Glutathione S-transferase, C-terminal domain AM480_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14830 PF03466 LysR substrate binding domain AM480_14835 PF03788 AM480_14835 AM480_14840 PF04172 AM480_14840 AM480_14845 PF00155 Aminotransferase class I and II AM480_14845 PF00392 Bacterial regulatory proteins, gntR family AM480_14850 PF04299 Putative FMN-binding domain AM480_14855 PF13302 Acetyltransferase (GNAT) domain AM480_14860 PF07690 Major Facilitator Superfamily AM480_14865 PF12973 ChrR Cupin-like domain AM480_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14870 PF03466 LysR substrate binding domain AM480_14875 PF16957 AM480_14875 AM480_14880 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM480_14885 PF06857 AM480_14885 AM480_14890 PF01039 Carboxyl transferase domain AM480_14895 PF06833 Malonate decarboxylase gamma subunit (MdcE) AM480_14900 PF10620 AM480_14900 AM480_14905 PF00698 Acyl transferase domain AM480_14910 PF03817 AM480_14910 AM480_14915 PF03818 AM480_14915 AM480_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_14920 PF03466 LysR substrate binding domain AM480_14925 PF00155 Aminotransferase class I and II AM480_14925 PF00392 Bacterial regulatory proteins, gntR family AM480_14935 PF02322 AM480_14935 AM480_14940 PF01654 AM480_14940 AM480_14955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_14955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_14960 PF00296 Luciferase-like monooxygenase AM480_14965 PF00083 Sugar (and other) transporter AM480_14975 PF13610 AM480_14975 AM480_14980 PF13523 Acetyltransferase (GNAT) domain AM480_14990 PF04986 AM480_14990 AM480_14990 PF14319 AM480_14990 AM480_14995 PF13610 AM480_14995 AM480_15005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM480_15015 PF00528 Binding-protein-dependent transport system inner membrane component AM480_15020 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM480_15025 PF01177 Asp/Glu/Hydantoin racemase AM480_15030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM480_15035 PF00392 Bacterial regulatory proteins, gntR family AM480_15035 PF07729 FCD domain AM480_15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_15040 PF03466 LysR substrate binding domain AM480_15045 PF00857 Isochorismatase family AM480_15050 PF07969 Amidohydrolase family AM480_15055 PF07235 AM480_15055 AM480_15060 PF03960 ArsC family AM480_15065 PF01022 Bacterial regulatory protein, arsR family AM480_15070 PF01758 Sodium Bile acid symporter family AM480_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_15075 PF03466 LysR substrate binding domain AM480_15080 PF02417 AM480_15080 AM480_15085 PF02417 AM480_15085 AM480_15090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_15090 PF13192 Thioredoxin domain AM480_15105 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_15105 PF06426 Serine acetyltransferase, N-terminal AM480_15110 PF00588 SpoU rRNA Methylase family AM480_15115 PF02811 PHP domain AM480_15115 PF07733 Bacterial DNA polymerase III alpha subunit AM480_15115 PF14579 Helix-hairpin-helix motif AM480_15120 PF00710 Asparaginase AM480_15125 PF00375 Sodium:dicarboxylate symporter family AM480_15130 PF00155 Aminotransferase class I and II AM480_15135 PF01641 SelR domain AM480_15140 PF00255 Glutathione peroxidase AM480_15145 PF02311 AraC-like ligand binding domain AM480_15145 PF12833 Helix-turn-helix domain AM480_15150 PF01810 AM480_15150 AM480_15155 PF00155 Aminotransferase class I and II AM480_15160 PF01909 Nucleotidyltransferase domain AM480_15160 PF01966 HD domain AM480_15160 PF08335 GlnD PII-uridylyltransferase AM480_15165 PF02222 ATP-grasp domain AM480_15170 PF14552 Tautomerase enzyme AM480_15175 PF05437 AM480_15175 AM480_15180 PF03591 AM480_15180 AM480_15195 PF00027 Cyclic nucleotide-binding domain AM480_15195 PF13545 Crp-like helix-turn-helix domain AM480_15200 PF06127 AM480_15200 AM480_15205 PF01926 50S ribosome-binding GTPase AM480_15205 PF06071 Protein of unknown function (DUF933) AM480_15210 PF00528 Binding-protein-dependent transport system inner membrane component AM480_15215 PF00005 ABC transporter AM480_15215 PF09383 NIL domain AM480_15220 PF03180 NLPA lipoprotein AM480_15225 PF03180 NLPA lipoprotein AM480_15230 PF00296 Luciferase-like monooxygenase AM480_15235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_15235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_15240 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_15240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_15240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_15245 PF13417 Glutathione S-transferase, N-terminal domain AM480_15245 PF14497 Glutathione S-transferase, C-terminal domain AM480_15250 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM480_15255 PF00528 Binding-protein-dependent transport system inner membrane component AM480_15260 PF00528 Binding-protein-dependent transport system inner membrane component AM480_15265 PF00005 ABC transporter AM480_15275 PF01037 AsnC family AM480_15275 PF13412 Winged helix-turn-helix DNA-binding AM480_15280 PF01709 Transcriptional regulator AM480_15285 PF01553 Acyltransferase AM480_15290 PF00440 Bacterial regulatory proteins, tetR family AM480_15305 PF00589 Phage integrase family AM480_15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_15310 PF03466 LysR substrate binding domain AM480_15315 PF05232 AM480_15315 AM480_15320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM480_15330 PF00892 EamA-like transporter family AM480_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_15335 PF03466 LysR substrate binding domain AM480_15350 PF00419 Fimbrial protein AM480_15355 PF00577 Outer membrane usher protein AM480_15355 PF13953 PapC C-terminal domain AM480_15355 PF13954 PapC N-terminal domain AM480_15360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM480_15360 PF02753 Pili assembly chaperone PapD, C-terminal domain AM480_15365 PF16970 AM480_15365 AM480_15380 PF04055 Radical SAM superfamily AM480_15380 PF06968 Biotin and Thiamin Synthesis associated domain AM480_15385 PF08331 AM480_15385 AM480_15385 PF13484 AM480_15385 AM480_15390 PF01256 Carbohydrate kinase AM480_15390 PF03853 YjeF-related protein N-terminus AM480_15395 PF02075 Crossover junction endodeoxyribonuclease RuvC AM480_15400 PF01381 Helix-turn-helix AM480_15405 PF13420 Acetyltransferase (GNAT) domain AM480_15410 PF00905 Penicillin binding protein transpeptidase domain AM480_15415 PF04186 AM480_15415 AM480_15430 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM480_15430 PF02772 S-adenosylmethionine synthetase, central domain AM480_15430 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM480_15435 PF00456 Transketolase, thiamine diphosphate binding domain AM480_15435 PF02779 Transketolase, pyrimidine binding domain AM480_15435 PF02780 Transketolase, C-terminal domain AM480_15440 PF02566 OsmC-like protein AM480_15445 PF04264 YceI-like domain AM480_15450 PF04970 Lecithin retinol acyltransferase AM480_15455 PF09992 Predicted periplasmic protein (DUF2233) AM480_15465 PF05958 tRNA (Uracil-5-)-methyltransferase AM480_15470 PF04229 GrpB protein AM480_15475 PF00171 Aldehyde dehydrogenase family AM480_15475 PF01619 Proline dehydrogenase AM480_15475 PF14850 DNA-binding domain of Proline dehydrogenase AM480_15480 PF01037 AsnC family AM480_15480 PF13404 AsnC-type helix-turn-helix domain AM480_15485 PF00474 Sodium:solute symporter family AM480_15490 PF02146 Sir2 family AM480_15495 PF01597 Glycine cleavage H-protein AM480_15500 PF12625 AM480_15500 AM480_15500 PF12833 Helix-turn-helix domain AM480_15505 PF01575 MaoC like domain AM480_15510 PF00005 ABC transporter AM480_15510 PF00664 ABC transporter transmembrane region AM480_15515 PF09831 AM480_15515 AM480_15520 PF06912 AM480_15520 AM480_15525 PF00375 Sodium:dicarboxylate symporter family AM480_15530 PF01022 Bacterial regulatory protein, arsR family AM480_15535 PF00440 Bacterial regulatory proteins, tetR family AM480_15540 PF08007 Cupin superfamily protein AM480_15545 PF02545 Maf-like protein AM480_15550 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) AM480_15555 PF00162 Phosphoglycerate kinase AM480_15565 PF01116 Fructose-bisphosphate aldolase class-II AM480_15570 PF00639 PPIC-type PPIASE domain AM480_15570 PF09312 SurA N-terminal domain AM480_15570 PF13616 PPIC-type PPIASE domain AM480_15575 PF03968 OstA-like protein AM480_15575 PF04453 Organic solvent tolerance protein AM480_15580 PF01636 Phosphotransferase enzyme family AM480_15585 PF00483 Nucleotidyl transferase AM480_15590 PF02527 rRNA small subunit methyltransferase G AM480_15595 PF13614 AAA domain AM480_15600 PF02195 ParB-like nuclease domain AM480_15605 PF01618 AM480_15605 AM480_15610 PF02472 Biopolymer transport protein ExbD/TolR AM480_15615 PF00005 ABC transporter AM480_15615 PF00664 ABC transporter transmembrane region AM480_15620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM480_15625 PF02348 Cytidylyltransferase AM480_15630 PF13177 DNA polymerase III, delta subunit AM480_15635 PF07238 PilZ domain AM480_15640 PF01026 TatD related DNase AM480_15645 PF00440 Bacterial regulatory proteins, tetR family AM480_15650 PF07963 Prokaryotic N-terminal methylation motif AM480_15655 PF02501 Type II secretion system (T2SS), protein I AM480_15655 PF07963 Prokaryotic N-terminal methylation motif AM480_15660 PF07963 Prokaryotic N-terminal methylation motif AM480_15660 PF11612 Type II secretion system (T2SS), protein J AM480_15665 PF03934 Type II secretion system (T2SS), protein K AM480_15670 PF01242 6-pyruvoyl tetrahydropterin synthase AM480_15675 PF03167 Uracil DNA glycosylase superfamily AM480_15680 PF16113 AM480_15680 AM480_15685 PF14437 AM480_15685 AM480_15690 PF10604 Polyketide cyclase / dehydrase and lipid transport AM480_15695 PF02224 Cytidylate kinase AM480_15700 PF00575 S1 RNA binding domain AM480_15705 PF00216 Bacterial DNA-binding protein AM480_15710 PF06305 AM480_15710 AM480_15715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM480_15720 PF03956 AM480_15720 AM480_15725 PF00743 Flavin-binding monooxygenase-like AM480_15730 PF12625 AM480_15730 AM480_15730 PF12833 Helix-turn-helix domain AM480_15735 PF03969 AFG1-like ATPase AM480_15740 PF00589 Phage integrase family AM480_15765 PF13479 AM480_15765 AM480_15795 PF00717 Peptidase S24-like AM480_15795 PF01381 Helix-turn-helix AM480_15815 PF00772 DnaB-like helicase N terminal domain AM480_15815 PF03796 DnaB-like helicase C terminal domain AM480_15830 PF12961 Domain of Unknown Function with PDB structure (DUF3850) AM480_15850 PF08774 VRR-NUC domain AM480_15855 PF00149 Calcineurin-like phosphoesterase AM480_15890 PF03237 Terminase-like family AM480_15890 PF17289 AM480_15890 AM480_15895 PF13264 AM480_15895 AM480_15900 PF04233 AM480_15900 AM480_15945 PF13554 Bacteriophage related domain of unknown function AM480_15950 PF09669 AM480_15950 AM480_15980 PF06120 AM480_15980 AM480_15990 PF05939 AM480_15990 AM480_16000 PF05100 AM480_16000 AM480_16005 PF00877 NlpC/P60 family AM480_16005 PF14464 Prokaryotic homologs of the JAB domain AM480_16010 PF06805 AM480_16010 AM480_16025 PF05838 Glycosyl hydrolase 108 AM480_16025 PF09374 Predicted Peptidoglycan domain AM480_16035 PF01274 Malate synthase AM480_16040 PF00583 Acetyltransferase (GNAT) family AM480_16045 PF02472 Biopolymer transport protein ExbD/TolR AM480_16050 PF02472 Biopolymer transport protein ExbD/TolR AM480_16055 PF01618 AM480_16055 AM480_16060 PF03544 Gram-negative bacterial TonB protein C-terminal AM480_16065 PF00593 TonB dependent receptor AM480_16065 PF07715 TonB-dependent Receptor Plug Domain AM480_16075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM480_16080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM480_16085 PF01432 Peptidase family M3 AM480_16090 PF00528 Binding-protein-dependent transport system inner membrane component AM480_16095 PF00528 Binding-protein-dependent transport system inner membrane component AM480_16095 PF12911 AM480_16095 AM480_16100 PF00005 ABC transporter AM480_16100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM480_16105 PF02586 Uncharacterised ACR, COG2135 AM480_16115 PF00459 Inositol monophosphatase family AM480_16120 PF00300 Histidine phosphatase superfamily (branch 1) AM480_16125 PF01649 Ribosomal protein S20 AM480_16130 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM480_16135 PF03737 Demethylmenaquinone methyltransferase AM480_16140 PF13417 Glutathione S-transferase, N-terminal domain AM480_16145 PF04261 Dyp-type peroxidase family AM480_16155 PF00270 DEAD/DEAH box helicase AM480_16155 PF00271 Helicase conserved C-terminal domain AM480_16155 PF02559 CarD-like/TRCF domain AM480_16155 PF03461 TRCF domain AM480_16160 PF01230 HIT domain AM480_16165 PF00211 Adenylate and Guanylate cyclase catalytic domain AM480_16170 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_16175 PF00012 Hsp70 protein AM480_16180 PF00226 DnaJ domain AM480_16180 PF07743 HSCB C-terminal oligomerisation domain AM480_16185 PF01521 Iron-sulphur cluster biosynthesis AM480_16190 PF01592 NifU-like N terminal domain AM480_16195 PF00266 Aminotransferase class-V AM480_16200 PF02082 Transcriptional regulator AM480_16210 PF05597 AM480_16210 AM480_16215 PF00216 Bacterial DNA-binding protein AM480_16220 PF13616 PPIC-type PPIASE domain AM480_16220 PF13624 SurA N-terminal domain AM480_16225 PF12833 Helix-turn-helix domain AM480_16225 PF12852 Cupin AM480_16230 PF00487 AM480_16230 AM480_16235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_16235 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_16240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_16240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_16245 PF03109 AM480_16245 AM480_16255 PF04073 Aminoacyl-tRNA editing domain AM480_16260 PF04183 IucA / IucC family AM480_16260 PF06276 Ferric iron reductase FhuF-like transporter AM480_16265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM480_16270 PF07690 Major Facilitator Superfamily AM480_16275 PF04183 IucA / IucC family AM480_16275 PF06276 Ferric iron reductase FhuF-like transporter AM480_16280 PF04183 IucA / IucC family AM480_16280 PF06276 Ferric iron reductase FhuF-like transporter AM480_16285 PF11575 AM480_16285 AM480_16290 PF03737 Demethylmenaquinone methyltransferase AM480_16295 PF00593 TonB dependent receptor AM480_16295 PF07715 TonB-dependent Receptor Plug Domain AM480_16305 PF03929 AM480_16305 AM480_16315 PF13523 Acetyltransferase (GNAT) domain AM480_16320 PF08125 Mannitol dehydrogenase C-terminal domain AM480_16320 PF13419 Haloacid dehalogenase-like hydrolase AM480_16325 PF13563 2'-5' RNA ligase superfamily AM480_16330 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM480_16335 PF02277 Phosphoribosyltransferase AM480_16340 PF00300 Histidine phosphatase superfamily (branch 1) AM480_16345 PF00328 Histidine phosphatase superfamily (branch 2) AM480_16350 PF02654 AM480_16350 AM480_16355 PF00793 DAHP synthetase I family AM480_16360 PF01925 AM480_16360 AM480_16380 PF00593 TonB dependent receptor AM480_16380 PF07715 TonB-dependent Receptor Plug Domain AM480_16385 PF02684 AM480_16385 AM480_16390 PF00440 Bacterial regulatory proteins, tetR family AM480_16390 PF09209 Domain of unknown function (DUF1956) AM480_16395 PF13437 HlyD family secretion protein AM480_16395 PF13533 Biotin-lipoyl like AM480_16400 PF00005 ABC transporter AM480_16405 PF12698 ABC-2 family transporter protein AM480_16410 PF12698 ABC-2 family transporter protein AM480_16415 PF10977 AM480_16415 AM480_16425 PF06078 Bacterial protein of unknown function (DUF937) AM480_16430 PF13609 Gram-negative porin AM480_16435 PF01230 HIT domain AM480_16440 PF13308 YARHG domain AM480_16445 PF04828 Glutathione-dependent formaldehyde-activating enzyme AM480_16460 PF13103 TonB C terminal AM480_16465 PF08241 Methyltransferase domain AM480_16470 PF00561 alpha/beta hydrolase fold AM480_16475 PF01053 Cys/Met metabolism PLP-dependent enzyme AM480_16485 PF02575 YbaB/EbfC DNA-binding family AM480_16490 PF02132 RecR protein AM480_16490 PF13662 Toprim domain AM480_16495 PF00570 HRDC domain AM480_16495 PF01612 3'-5' exonuclease AM480_16510 PF00579 tRNA synthetases class I (W and Y) AM480_16515 PF07690 Major Facilitator Superfamily AM480_16520 PF02311 AraC-like ligand binding domain AM480_16520 PF12833 Helix-turn-helix domain AM480_16525 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_16530 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_16535 PF00171 Aldehyde dehydrogenase family AM480_16540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM480_16545 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM480_16550 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_16555 PF03328 HpcH/HpaI aldolase/citrate lyase family AM480_16560 PF00171 Aldehyde dehydrogenase family AM480_16565 PF00083 Sugar (and other) transporter AM480_16565 PF07690 Major Facilitator Superfamily AM480_16570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_16570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_16575 PF01613 Flavin reductase like domain AM480_16580 PF01047 MarR family AM480_16585 PF00171 Aldehyde dehydrogenase family AM480_16590 PF00920 Dehydratase family AM480_16595 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM480_16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_16600 PF03466 LysR substrate binding domain AM480_16605 PF01370 NAD dependent epimerase/dehydratase family AM480_16610 PF07690 Major Facilitator Superfamily AM480_16615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM480_16615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM480_16620 PF06719 AM480_16620 AM480_16620 PF12833 Helix-turn-helix domain AM480_16625 PF02627 Carboxymuconolactone decarboxylase family AM480_16630 PF00107 Zinc-binding dehydrogenase AM480_16630 PF08240 Alcohol dehydrogenase GroES-like domain AM480_16635 PF01497 Periplasmic binding protein AM480_16640 PF01032 FecCD transport family AM480_16645 PF00005 ABC transporter AM480_16650 PF00583 Acetyltransferase (GNAT) family AM480_16655 PF02311 AraC-like ligand binding domain AM480_16655 PF12833 Helix-turn-helix domain AM480_16660 PF01925 AM480_16660 AM480_16665 PF00156 Phosphoribosyl transferase domain AM480_16670 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM480_16675 PF00293 NUDIX domain AM480_16680 PF02219 Methylenetetrahydrofolate reductase AM480_16680 PF12225 AM480_16680 AM480_16685 PF13437 HlyD family secretion protein AM480_16685 PF13533 Biotin-lipoyl like AM480_16690 PF07690 Major Facilitator Superfamily AM480_16700 PF03321 GH3 auxin-responsive promoter AM480_16705 PF02321 Outer membrane efflux protein AM480_16715 PF01975 Survival protein SurE AM480_16725 PF13328 HD domain AM480_16735 PF00440 Bacterial regulatory proteins, tetR family AM480_16740 PF13643 AM480_16740 AM480_16755 PF03374 AM480_16755 AM480_16765 PF05488 PAAR motif AM480_16775 PF00326 Prolyl oligopeptidase family AM480_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_16780 PF03466 LysR substrate binding domain AM480_16785 PF00106 short chain dehydrogenase AM480_16790 PF12146 Putative lysophospholipase AM480_16795 PF12625 AM480_16795 AM480_16795 PF12833 Helix-turn-helix domain AM480_16805 PF00512 His Kinase A (phospho-acceptor) domain AM480_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_16810 PF00072 Response regulator receiver domain AM480_16810 PF00486 Transcriptional regulatory protein, C terminal AM480_16815 PF16576 AM480_16815 AM480_16820 PF00873 AcrB/AcrD/AcrF family AM480_16830 PF12146 Putative lysophospholipase AM480_16835 PF13738 Pyridine nucleotide-disulphide oxidoreductase AM480_16840 PF01593 Flavin containing amine oxidoreductase AM480_16845 PF03435 Saccharopine dehydrogenase AM480_16850 PF00440 Bacterial regulatory proteins, tetR family AM480_16855 PF01266 FAD dependent oxidoreductase AM480_16880 PF00171 Aldehyde dehydrogenase family AM480_16885 PF05544 Proline racemase AM480_16890 PF00732 GMC oxidoreductase AM480_16890 PF05199 GMC oxidoreductase AM480_16895 PF07883 Cupin domain AM480_16900 PF00561 alpha/beta hydrolase fold AM480_16905 PF01958 Domain of unknown function DUF108 AM480_16905 PF03447 Homoserine dehydrogenase, NAD binding domain AM480_16910 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_16915 PF02264 LamB porin AM480_16920 PF07978 NIPSNAP AM480_16925 PF07883 Cupin domain AM480_16930 PF07690 Major Facilitator Superfamily AM480_16935 PF00732 GMC oxidoreductase AM480_16935 PF05199 GMC oxidoreductase AM480_16940 PF00892 EamA-like transporter family AM480_16945 PF01738 Dienelactone hydrolase family AM480_16950 PF00356 Bacterial regulatory proteins, lacI family AM480_16950 PF13377 Periplasmic binding protein-like domain AM480_16955 PF04172 AM480_16955 AM480_16965 PF00815 Histidinol dehydrogenase AM480_16970 PF00205 Thiamine pyrophosphate enzyme, central domain AM480_16970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM480_16970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM480_16975 PF01266 FAD dependent oxidoreductase AM480_16975 PF05199 GMC oxidoreductase AM480_16980 PF07690 Major Facilitator Superfamily AM480_16985 PF00459 Inositol monophosphatase family AM480_16990 PF02597 ThiS family AM480_16995 PF05690 Thiazole biosynthesis protein ThiG AM480_17000 PF02264 LamB porin AM480_17010 PF00205 Thiamine pyrophosphate enzyme, central domain AM480_17010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM480_17010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM480_17015 PF06283 Trehalose utilisation AM480_17020 PF00356 Bacterial regulatory proteins, lacI family AM480_17020 PF13377 Periplasmic binding protein-like domain AM480_17025 PF01261 Xylose isomerase-like TIM barrel AM480_17030 PF00732 GMC oxidoreductase AM480_17030 PF05199 GMC oxidoreductase AM480_17035 PF00933 Glycosyl hydrolase family 3 N terminal domain AM480_17045 PF00293 NUDIX domain AM480_17050 PF00248 Aldo/keto reductase family AM480_17060 PF16970 AM480_17060 AM480_17065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM480_17065 PF02753 Pili assembly chaperone PapD, C-terminal domain AM480_17070 PF00577 Outer membrane usher protein AM480_17070 PF13953 PapC C-terminal domain AM480_17070 PF13954 PapC N-terminal domain AM480_17075 PF00419 Fimbrial protein AM480_17080 PF16223 AM480_17080 AM480_17085 PF00107 Zinc-binding dehydrogenase AM480_17085 PF08240 Alcohol dehydrogenase GroES-like domain AM480_17095 PF00199 Catalase AM480_17110 PF13091 PLD-like domain AM480_17130 PF01244 Membrane dipeptidase (Peptidase family M19) AM480_17135 PF04055 Radical SAM superfamily AM480_17135 PF13186 Iron-sulfur cluster-binding domain AM480_17135 PF13353 4Fe-4S single cluster domain AM480_17140 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM480_17145 PF03070 TENA/THI-4/PQQC family AM480_17150 PF12706 Beta-lactamase superfamily domain AM480_17155 PF08042 AM480_17155 AM480_17160 PF02503 Polyphosphate kinase middle domain AM480_17160 PF13089 Polyphosphate kinase N-terminal domain AM480_17160 PF13090 Polyphosphate kinase C-terminal domain AM480_17165 PF01610 AM480_17165 AM480_17165 PF14690 AM480_17165 AM480_17170 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM480_17170 PF04851 Type III restriction enzyme, res subunit AM480_17175 PF01420 Type I restriction modification DNA specificity domain AM480_17185 PF02384 N-6 DNA Methylase AM480_17185 PF12161 HsdM N-terminal domain AM480_17190 PF00149 Calcineurin-like phosphoesterase AM480_17190 PF02872 5'-nucleotidase, C-terminal domain AM480_17195 PF01475 Ferric uptake regulator family AM480_17200 PF00857 Isochorismatase family AM480_17205 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_17210 PF00005 ABC transporter AM480_17215 PF00528 Binding-protein-dependent transport system inner membrane component AM480_17220 PF13531 Bacterial extracellular solute-binding protein AM480_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17230 PF00355 Rieske [2Fe-2S] domain AM480_17230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM480_17235 PF00866 Ring hydroxylating beta subunit AM480_17240 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_17240 PF00175 Oxidoreductase NAD-binding domain AM480_17240 PF00970 Oxidoreductase FAD-binding domain AM480_17245 PF12833 Helix-turn-helix domain AM480_17245 PF14525 AM480_17245 AM480_17250 PF13557 AM480_17250 AM480_17255 PF01613 Flavin reductase like domain AM480_17265 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_17270 PF01738 Dienelactone hydrolase family AM480_17275 PF07690 Major Facilitator Superfamily AM480_17280 PF12833 Helix-turn-helix domain AM480_17280 PF14525 AM480_17280 AM480_17285 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_17290 PF02447 AM480_17290 AM480_17300 PF00440 Bacterial regulatory proteins, tetR family AM480_17305 PF07681 AM480_17305 AM480_17310 PF11738 Protein of unknown function (DUF3298) AM480_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17320 PF03466 LysR substrate binding domain AM480_17325 PF01144 Coenzyme A transferase AM480_17330 PF01144 Coenzyme A transferase AM480_17335 PF02667 AM480_17335 AM480_17340 PF00108 Thiolase, N-terminal domain AM480_17340 PF02803 Thiolase, C-terminal domain AM480_17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17345 PF03466 LysR substrate binding domain AM480_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17350 PF03466 LysR substrate binding domain AM480_17365 PF00206 Lyase AM480_17365 PF10415 Fumarase C C-terminus AM480_17370 PF00593 TonB dependent receptor AM480_17370 PF07715 TonB-dependent Receptor Plug Domain AM480_17375 PF00083 Sugar (and other) transporter AM480_17375 PF07690 Major Facilitator Superfamily AM480_17380 PF06155 Protein of unknown function (DUF971) AM480_17385 PF13646 HEAT repeats AM480_17390 PF00005 ABC transporter AM480_17395 PF00528 Binding-protein-dependent transport system inner membrane component AM480_17400 PF13379 NMT1-like family AM480_17405 PF12838 4Fe-4S dicluster domain AM480_17410 PF00890 FAD binding domain AM480_17410 PF02910 Fumarate reductase flavoprotein C-term AM480_17415 PF00392 Bacterial regulatory proteins, gntR family AM480_17415 PF07702 UTRA domain AM480_17420 PF02417 AM480_17420 AM480_17425 PF02525 Flavodoxin-like fold AM480_17430 PF01638 HxlR-like helix-turn-helix AM480_17435 PF12833 Helix-turn-helix domain AM480_17440 PF00892 EamA-like transporter family AM480_17445 PF00742 Homoserine dehydrogenase AM480_17445 PF03447 Homoserine dehydrogenase, NAD binding domain AM480_17450 PF01925 AM480_17450 AM480_17455 PF04273 Putative phosphatase (DUF442) AM480_17455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_17460 PF00753 Metallo-beta-lactamase superfamily AM480_17465 PF00158 Sigma-54 interaction domain AM480_17465 PF02954 Bacterial regulatory protein, Fis family AM480_17470 PF01062 AM480_17470 AM480_17475 PF00107 Zinc-binding dehydrogenase AM480_17475 PF08240 Alcohol dehydrogenase GroES-like domain AM480_17480 PF00106 short chain dehydrogenase AM480_17485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM480_17485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_17490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM480_17490 PF00364 Biotin-requiring enzyme AM480_17490 PF02817 e3 binding domain AM480_17495 PF02779 Transketolase, pyrimidine binding domain AM480_17495 PF02780 Transketolase, C-terminal domain AM480_17500 PF00676 Dehydrogenase E1 component AM480_17505 PF04055 Radical SAM superfamily AM480_17515 PF14518 Iron-containing redox enzyme AM480_17520 PF00990 GGDEF domain AM480_17525 PF01264 Chorismate synthase AM480_17530 PF05175 Methyltransferase small domain AM480_17535 PF00291 Pyridoxal-phosphate dependent enzyme AM480_17540 PF00665 Integrase core domain AM480_17540 PF13936 Helix-turn-helix domain AM480_17545 PF05762 VWA domain containing CoxE-like protein AM480_17550 PF00004 ATPase family associated with various cellular activities (AAA) AM480_17560 PF05166 YcgL domain AM480_17585 PF01965 DJ-1/PfpI family AM480_17600 PF00199 Catalase AM480_17600 PF06628 Catalase-related immune-responsive AM480_17605 PF00561 alpha/beta hydrolase fold AM480_17610 PF06314 Acetoacetate decarboxylase (ADC) AM480_17615 PF00171 Aldehyde dehydrogenase family AM480_17620 PF00107 Zinc-binding dehydrogenase AM480_17620 PF08240 Alcohol dehydrogenase GroES-like domain AM480_17625 PF00474 Sodium:solute symporter family AM480_17630 PF04341 AM480_17630 AM480_17635 PF00501 AMP-binding enzyme AM480_17635 PF13193 AMP-binding enzyme C-terminal domain AM480_17645 PF00158 Sigma-54 interaction domain AM480_17645 PF02954 Bacterial regulatory protein, Fis family AM480_17645 PF06506 Propionate catabolism activator AM480_17650 PF00106 short chain dehydrogenase AM480_17655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_17655 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_17655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_17660 PF00300 Histidine phosphatase superfamily (branch 1) AM480_17670 PF01636 Phosphotransferase enzyme family AM480_17675 PF00171 Aldehyde dehydrogenase family AM480_17685 PF07690 Major Facilitator Superfamily AM480_17690 PF00920 Dehydratase family AM480_17695 PF00392 Bacterial regulatory proteins, gntR family AM480_17695 PF07729 FCD domain AM480_17700 PF09694 AM480_17700 AM480_17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17705 PF03466 LysR substrate binding domain AM480_17710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM480_17710 PF13378 Enolase C-terminal domain-like AM480_17715 PF02426 Muconolactone delta-isomerase AM480_17720 PF00775 Dioxygenase AM480_17720 PF04444 Catechol dioxygenase N terminus AM480_17725 PF01144 Coenzyme A transferase AM480_17730 PF01144 Coenzyme A transferase AM480_17735 PF00108 Thiolase, N-terminal domain AM480_17735 PF02803 Thiolase, C-terminal domain AM480_17740 PF00561 alpha/beta hydrolase fold AM480_17745 PF00171 Aldehyde dehydrogenase family AM480_17755 PF01179 Copper amine oxidase, enzyme domain AM480_17755 PF02727 Copper amine oxidase, N2 domain AM480_17755 PF02728 Copper amine oxidase, N3 domain AM480_17755 PF07833 Copper amine oxidase N-terminal domain AM480_17760 PF12833 Helix-turn-helix domain AM480_17760 PF14525 AM480_17760 AM480_17765 PF01613 Flavin reductase like domain AM480_17770 PF00111 2Fe-2S iron-sulfur cluster binding domain AM480_17770 PF00175 Oxidoreductase NAD-binding domain AM480_17770 PF00970 Oxidoreductase FAD-binding domain AM480_17775 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_17780 PF00866 Ring hydroxylating beta subunit AM480_17785 PF00355 Rieske [2Fe-2S] domain AM480_17785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM480_17790 PF13577 SnoaL-like domain AM480_17800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_17800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM480_17805 PF01425 Amidase AM480_17810 PF01047 MarR family AM480_17815 PF07690 Major Facilitator Superfamily AM480_17820 PF03573 outer membrane porin, OprD family AM480_17825 PF00106 short chain dehydrogenase AM480_17830 PF00300 Histidine phosphatase superfamily (branch 1) AM480_17835 PF01636 Phosphotransferase enzyme family AM480_17840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_17840 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_17840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_17845 PF03466 LysR substrate binding domain AM480_17850 PF01614 Bacterial transcriptional regulator AM480_17850 PF09339 IclR helix-turn-helix domain AM480_17855 PF00753 Metallo-beta-lactamase superfamily AM480_17860 PF04143 AM480_17860 AM480_17865 PF04143 AM480_17865 AM480_17875 PF01011 PQQ enzyme repeat AM480_17880 PF04966 Carbohydrate-selective porin, OprB family AM480_17885 PF13229 Right handed beta helix region AM480_17890 PF01487 Type I 3-dehydroquinase AM480_17895 PF00775 Dioxygenase AM480_17900 PF00775 Dioxygenase AM480_17900 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM480_17905 PF02627 Carboxymuconolactone decarboxylase family AM480_17910 PF07690 Major Facilitator Superfamily AM480_17915 PF00561 alpha/beta hydrolase fold AM480_17920 PF00206 Lyase AM480_17920 PF10397 Adenylosuccinate lyase C-terminus AM480_17925 PF00108 Thiolase, N-terminal domain AM480_17925 PF02803 Thiolase, C-terminal domain AM480_17930 PF01144 Coenzyme A transferase AM480_17935 PF01144 Coenzyme A transferase AM480_17940 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM480_17945 PF04977 Septum formation initiator AM480_17950 PF04239 Protein of unknown function (DUF421) AM480_17955 PF00113 Enolase, C-terminal TIM barrel domain AM480_17955 PF03952 Enolase, N-terminal domain AM480_17960 PF00793 DAHP synthetase I family AM480_17965 PF00117 Glutamine amidotransferase class-I AM480_17965 PF06418 CTP synthase N-terminus AM480_17975 PF10118 AM480_17975 AM480_17980 PF12146 Putative lysophospholipase AM480_17985 PF13472 GDSL-like Lipase/Acylhydrolase family AM480_17990 PF12680 SnoaL-like domain AM480_17995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM480_17995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_18000 PF03551 Transcriptional regulator PadR-like family AM480_18000 PF10400 Virulence activator alpha C-term AM480_18005 PF12697 Alpha/beta hydrolase family AM480_18010 PF00793 DAHP synthetase I family AM480_18015 PF02694 AM480_18015 AM480_18020 PF00004 ATPase family associated with various cellular activities (AAA) AM480_18020 PF02861 Clp amino terminal domain AM480_18020 PF07724 AAA domain (Cdc48 subfamily) AM480_18020 PF10431 C-terminal, D2-small domain, of ClpB protein AM480_18025 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM480_18035 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM480_18035 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM480_18045 PF01863 Protein of unknown function DUF45 AM480_18050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM480_18055 PF00291 Pyridoxal-phosphate dependent enzyme AM480_18055 PF00585 C-terminal regulatory domain of Threonine dehydratase AM480_18060 PF02254 TrkA-N domain AM480_18065 PF02386 Cation transport protein AM480_18070 PF02253 Phospholipase A1 AM480_18075 PF00675 Insulinase (Peptidase family M16) AM480_18075 PF05193 Peptidase M16 inactive domain AM480_18075 PF08367 Peptidase M16C associated AM480_18080 PF00593 TonB dependent receptor AM480_18080 PF07715 TonB-dependent Receptor Plug Domain AM480_18085 PF00294 pfkB family carbohydrate kinase AM480_18090 PF00355 Rieske [2Fe-2S] domain AM480_18095 PF07290 AM480_18095 AM480_18110 PF01654 AM480_18110 AM480_18115 PF02322 AM480_18115 AM480_18120 PF08173 AM480_18120 AM480_18125 PF09600 AM480_18125 AM480_18130 PF00583 Acetyltransferase (GNAT) family AM480_18135 PF09829 AM480_18135 AM480_18140 PF00881 Nitroreductase family AM480_18145 PF00448 SRP54-type protein, GTPase domain AM480_18145 PF02881 SRP54-type protein, helical bundle domain AM480_18165 PF11042 AM480_18165 AM480_18170 PF00571 CBS domain AM480_18175 PF00202 Aminotransferase class-III AM480_18180 PF00462 Glutaredoxin AM480_18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_18190 PF03466 LysR substrate binding domain AM480_18195 PF00557 Metallopeptidase family M24 AM480_18200 PF05525 AM480_18200 AM480_18205 PF03928 Domain of unknown function (DUF336) AM480_18220 PF00561 alpha/beta hydrolase fold AM480_18225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM480_18225 PF00381 PTS HPr component phosphorylation site AM480_18225 PF00391 PEP-utilising enzyme, mobile domain AM480_18225 PF02896 PEP-utilising enzyme, TIM barrel domain AM480_18225 PF05524 PEP-utilising enzyme, N-terminal AM480_18230 PF00294 pfkB family carbohydrate kinase AM480_18235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM480_18235 PF02378 Phosphotransferase system, EIIC AM480_18240 PF08308 AM480_18240 AM480_18255 PF13693 Winged helix-turn-helix DNA-binding AM480_18260 PF00665 Integrase core domain AM480_18260 PF09299 Mu transposase, C-terminal AM480_18265 PF13401 AAA domain AM480_18285 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM480_18295 PF07352 Bacteriophage Mu Gam like protein AM480_18300 PF00216 Bacterial DNA-binding protein AM480_18320 PF06252 AM480_18320 AM480_18325 PF08765 Mor transcription activator family AM480_18330 PF05838 Glycosyl hydrolase 108 AM480_18330 PF09374 Predicted Peptidoglycan domain AM480_18350 PF11985 AM480_18350 AM480_18370 PF13643 AM480_18370 AM480_18375 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM480_18380 PF06074 AM480_18380 AM480_18385 PF04233 AM480_18385 AM480_18390 PF05069 AM480_18390 AM480_18395 PF10123 AM480_18395 AM480_18405 PF10124 AM480_18405 AM480_18410 PF07030 AM480_18410 AM480_18415 PF08873 AM480_18415 AM480_18435 PF17482 AM480_18435 AM480_18465 PF07157 AM480_18465 AM480_18475 PF06890 Bacteriophage Mu Gp45 protein AM480_18480 PF07409 AM480_18480 AM480_18485 PF04865 AM480_18485 AM480_18490 PF10076 AM480_18490 AM480_18495 PF05268 AM480_18495 AM480_18500 PF01047 MarR family AM480_18510 PF00563 EAL domain AM480_18510 PF00990 GGDEF domain AM480_18510 PF08447 PAS fold AM480_18510 PF08448 PAS fold AM480_18515 PF00582 Universal stress protein family AM480_18520 PF07995 Glucose / Sorbosone dehydrogenase AM480_18525 PF02586 Uncharacterised ACR, COG2135 AM480_18530 PF00916 AM480_18530 AM480_18530 PF01740 STAS domain AM480_18535 PF00082 Subtilase family AM480_18535 PF05922 Peptidase inhibitor I9 AM480_18540 PF07859 alpha/beta hydrolase fold AM480_18545 PF00324 Amino acid permease AM480_18550 PF00266 Aminotransferase class-V AM480_18555 PF01037 AsnC family AM480_18555 PF13412 Winged helix-turn-helix DNA-binding AM480_18560 PF13302 Acetyltransferase (GNAT) domain AM480_18575 PF05666 AM480_18575 AM480_18580 PF13419 Haloacid dehalogenase-like hydrolase AM480_18585 PF01479 S4 domain AM480_18590 PF00154 recA bacterial DNA recombination protein AM480_18595 PF02631 RecX family AM480_18605 PF13174 Tetratricopeptide repeat AM480_18605 PF16331 AM480_18605 AM480_18610 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_18610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM480_18615 PF07977 FabA-like domain AM480_18620 PF00132 Bacterial transferase hexapeptide (six repeats) AM480_18620 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM480_18620 PF14602 Hexapeptide repeat of succinyl-transferase AM480_18625 PF03938 Outer membrane protein (OmpH-like) AM480_18630 PF01103 Surface antigen AM480_18630 PF07244 Surface antigen variable number repeat AM480_18635 PF02163 Peptidase family M50 AM480_18635 PF13180 PDZ domain AM480_18640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM480_18640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AM480_18640 PF13288 DXP reductoisomerase C-terminal domain AM480_18645 PF01148 Cytidylyltransferase family AM480_18650 PF01255 Putative undecaprenyl diphosphate synthase AM480_18655 PF01765 Ribosome recycling factor AM480_18660 PF00696 Amino acid kinase family AM480_18665 PF00919 Uncharacterized protein family UPF0004 AM480_18665 PF04055 Radical SAM superfamily AM480_18675 PF00512 His Kinase A (phospho-acceptor) domain AM480_18675 PF00989 PAS fold AM480_18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_18680 PF00072 Response regulator receiver domain AM480_18680 PF00158 Sigma-54 interaction domain AM480_18680 PF02954 Bacterial regulatory protein, Fis family AM480_18685 PF00440 Bacterial regulatory proteins, tetR family AM480_18690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM480_18690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM480_18700 PF02542 YgbB family AM480_18710 PF01266 FAD dependent oxidoreductase AM480_18735 PF00206 Lyase AM480_18735 PF10415 Fumarase C C-terminus AM480_18740 PF01370 NAD dependent epimerase/dehydratase family AM480_18745 PF02635 DsrE/DsrF-like family AM480_18760 PF04358 DsrC like protein AM480_18765 PF00892 EamA-like transporter family AM480_18770 PF00155 Aminotransferase class I and II AM480_18770 PF00392 Bacterial regulatory proteins, gntR family AM480_18775 PF01638 HxlR-like helix-turn-helix AM480_18780 PF00994 Probable molybdopterin binding domain AM480_18780 PF03453 MoeA N-terminal region (domain I and II) AM480_18780 PF03454 MoeA C-terminal region (domain IV) AM480_18785 PF00994 Probable molybdopterin binding domain AM480_18785 PF01967 MoaC family AM480_18790 PF02391 MoaE protein AM480_18795 PF02597 ThiS family AM480_18800 PF04055 Radical SAM superfamily AM480_18800 PF06463 Molybdenum Cofactor Synthesis C AM480_18800 PF13353 4Fe-4S single cluster domain AM480_18805 PF00384 Molybdopterin oxidoreductase AM480_18805 PF01568 Molydopterin dinucleotide binding domain AM480_18805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM480_18810 PF12804 MobA-like NTP transferase domain AM480_18815 PF00384 Molybdopterin oxidoreductase AM480_18815 PF01568 Molydopterin dinucleotide binding domain AM480_18815 PF04324 BFD-like [2Fe-2S] binding domain AM480_18815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM480_18820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_18820 PF13806 Rieske-like [2Fe-2S] domain AM480_18825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM480_18825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM480_18825 PF04324 BFD-like [2Fe-2S] binding domain AM480_18825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM480_18835 PF00072 Response regulator receiver domain AM480_18835 PF03861 ANTAR domain AM480_18840 PF13379 NMT1-like family AM480_18845 PF00817 impB/mucB/samB family AM480_18845 PF11799 impB/mucB/samB family C-terminal domain AM480_18845 PF13438 AM480_18845 AM480_18850 PF01220 Dehydroquinase class II AM480_18855 PF00364 Biotin-requiring enzyme AM480_18860 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM480_18860 PF02785 Biotin carboxylase C-terminal domain AM480_18860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM480_18870 PF12832 MFS_1 like family AM480_18875 PF14518 Iron-containing redox enzyme AM480_18880 PF00440 Bacterial regulatory proteins, tetR family AM480_18885 PF03929 AM480_18885 AM480_18890 PF01645 Conserved region in glutamate synthase AM480_18895 PF12146 Putative lysophospholipase AM480_18900 PF02698 DUF218 domain AM480_18905 PF01565 FAD binding domain AM480_18905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM480_18910 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM480_18915 PF10282 Lactonase, 7-bladed beta-propeller AM480_18920 PF00465 Iron-containing alcohol dehydrogenase AM480_18925 PF13279 Thioesterase-like superfamily AM480_18930 PF04185 Phosphoesterase family AM480_18930 PF05506 AM480_18930 AM480_18935 PF05887 AM480_18935 AM480_18935 PF12169 DNA polymerase III subunits gamma and tau domain III AM480_18935 PF13177 DNA polymerase III, delta subunit AM480_18940 PF07690 Major Facilitator Superfamily AM480_18945 PF00440 Bacterial regulatory proteins, tetR family AM480_18950 PF00144 Beta-lactamase AM480_18955 PF01575 MaoC like domain AM480_18960 PF13561 Enoyl-(Acyl carrier protein) reductase AM480_18965 PF00108 Thiolase, N-terminal domain AM480_18965 PF02803 Thiolase, C-terminal domain AM480_18970 PF05232 AM480_18970 AM480_18975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_18975 PF03466 LysR substrate binding domain AM480_18980 PF00923 Transaldolase AM480_18985 PF01810 AM480_18985 AM480_18990 PF01037 AsnC family AM480_18990 PF13412 Winged helix-turn-helix DNA-binding AM480_18995 PF03594 AM480_18995 AM480_19000 PF02308 AM480_19000 AM480_19005 PF00122 E1-E2 ATPase AM480_19005 PF00690 Cation transporter/ATPase, N-terminus AM480_19005 PF00702 haloacid dehalogenase-like hydrolase AM480_19010 PF06271 AM480_19010 AM480_19025 PF00582 Universal stress protein family AM480_19030 PF00005 ABC transporter AM480_19045 PF03922 OmpW family AM480_19050 PF00593 TonB dependent receptor AM480_19050 PF07715 TonB-dependent Receptor Plug Domain AM480_19055 PF13527 Acetyltransferase (GNAT) domain AM480_19080 PF00924 Mechanosensitive ion channel AM480_19090 PF00593 TonB dependent receptor AM480_19090 PF07715 TonB-dependent Receptor Plug Domain AM480_19095 PF00440 Bacterial regulatory proteins, tetR family AM480_19110 PF01037 AsnC family AM480_19110 PF13412 Winged helix-turn-helix DNA-binding AM480_19115 PF01817 Chorismate mutase type II AM480_19120 PF00106 short chain dehydrogenase AM480_19125 PF00106 short chain dehydrogenase AM480_19130 PF13417 Glutathione S-transferase, N-terminal domain AM480_19130 PF14497 Glutathione S-transferase, C-terminal domain AM480_19135 PF01433 Peptidase family M1 AM480_19135 PF11940 Domain of unknown function (DUF3458) AM480_19135 PF17432 AM480_19135 AM480_19155 PF02110 Hydroxyethylthiazole kinase family AM480_19160 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM480_19165 PF05970 AM480_19165 AM480_19165 PF14493 AM480_19165 AM480_19170 PF00465 Iron-containing alcohol dehydrogenase AM480_19175 PF12146 Putative lysophospholipase AM480_19185 PF00171 Aldehyde dehydrogenase family AM480_19190 PF13520 Amino acid permease AM480_19195 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM480_19200 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM480_19205 PF00117 Glutamine amidotransferase class-I AM480_19210 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM480_19210 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM480_19215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM480_19220 PF00149 Calcineurin-like phosphoesterase AM480_19230 PF00881 Nitroreductase family AM480_19235 PF00892 EamA-like transporter family AM480_19240 PF17209 AM480_19240 AM480_19245 PF01715 IPP transferase AM480_19250 PF01119 DNA mismatch repair protein, C-terminal domain AM480_19250 PF08676 MutL C terminal dimerisation domain AM480_19250 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_19255 PF02367 Uncharacterised P-loop hydrolase UPF0079 AM480_19260 PF00849 RNA pseudouridylate synthase AM480_19265 PF04221 RelB antitoxin AM480_19270 PF00583 Acetyltransferase (GNAT) family AM480_19275 PF00849 RNA pseudouridylate synthase AM480_19275 PF01479 S4 domain AM480_19285 PF04284 AM480_19285 AM480_19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_19290 PF03466 LysR substrate binding domain AM480_19295 PF10670 AM480_19295 AM480_19305 PF07690 Major Facilitator Superfamily AM480_19310 PF00520 Ion transport protein AM480_19320 PF00330 Aconitase family (aconitate hydratase) AM480_19320 PF06434 Aconitate hydratase 2 N-terminus AM480_19320 PF11791 Aconitate B N-terminal domain AM480_19335 PF00717 Peptidase S24-like AM480_19340 PF00817 impB/mucB/samB family AM480_19340 PF11799 impB/mucB/samB family C-terminal domain AM480_19365 PF16082 AM480_19365 AM480_19390 PF10547 AM480_19390 AM480_19400 PF01381 Helix-turn-helix AM480_19400 PF06114 Domain of unknown function (DUF955) AM480_19445 PF02018 Carbohydrate binding domain AM480_19445 PF09327 AM480_19445 AM480_19445 PF15711 AM480_19445 AM480_19465 PF05016 Plasmid stabilisation system protein AM480_19470 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM480_19485 PF10547 AM480_19485 AM480_19540 PF12571 AM480_19540 AM480_19555 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM480_19610 PF10547 AM480_19610 AM480_19615 PF15919 AM480_19615 AM480_19640 PF12844 Helix-turn-helix domain AM480_19645 PF05866 Endodeoxyribonuclease RusA AM480_19685 PF01695 IstB-like ATP binding protein AM480_19695 PF00145 C-5 cytosine-specific DNA methylase AM480_19710 PF13392 HNH endonuclease AM480_19740 PF01381 Helix-turn-helix AM480_19745 PF00717 Peptidase S24-like AM480_19745 PF01381 Helix-turn-helix AM480_19760 PF10065 AM480_19760 AM480_19785 PF13935 AM480_19785 AM480_19810 PF00589 Phage integrase family AM480_19810 PF13356 Domain of unknown function (DUF4102) AM480_19815 PF04357 AM480_19815 AM480_19820 PF01103 Surface antigen AM480_19820 PF07244 Surface antigen variable number repeat AM480_19820 PF17243 AM480_19820 AM480_19825 PF07690 Major Facilitator Superfamily AM480_19830 PF03232 AM480_19830 AM480_19835 PF10973 AM480_19835 AM480_19840 PF00120 Glutamine synthetase, catalytic domain AM480_19845 PF00072 Response regulator receiver domain AM480_19845 PF00486 Transcriptional regulatory protein, C terminal AM480_19850 PF00512 His Kinase A (phospho-acceptor) domain AM480_19850 PF00582 Universal stress protein family AM480_19850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_19850 PF02702 Osmosensitive K+ channel His kinase sensor domain AM480_19850 PF13493 Domain of unknown function (DUF4118) AM480_19855 PF02669 AM480_19855 AM480_19860 PF00122 E1-E2 ATPase AM480_19860 PF00702 haloacid dehalogenase-like hydrolase AM480_19865 PF03814 AM480_19865 AM480_19870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM480_19875 PF02152 Dihydroneopterin aldolase AM480_19880 PF03109 AM480_19880 AM480_19885 PF00899 ThiF family AM480_19890 PF01613 Flavin reductase like domain AM480_19895 PF00501 AMP-binding enzyme AM480_19895 PF13193 AMP-binding enzyme C-terminal domain AM480_19900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_19900 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_19900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_19905 PF00106 short chain dehydrogenase AM480_19910 PF12625 AM480_19910 AM480_19910 PF12833 Helix-turn-helix domain AM480_19915 PF05175 Methyltransferase small domain AM480_19920 PF00472 RF-1 domain AM480_19920 PF03462 PCRF domain AM480_19925 PF17124 AM480_19925 AM480_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_19930 PF03466 LysR substrate binding domain AM480_19950 PF00296 Luciferase-like monooxygenase AM480_19960 PF13994 AM480_19960 AM480_19965 PF13641 Glycosyltransferase like family 2 AM480_19970 PF01522 Polysaccharide deacetylase AM480_19970 PF14883 Hypothetical glycosyl hydrolase family 13 AM480_19980 PF03618 AM480_19980 AM480_19985 PF00391 PEP-utilising enzyme, mobile domain AM480_19985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM480_19985 PF02896 PEP-utilising enzyme, TIM barrel domain AM480_19990 PF06271 AM480_19990 AM480_19990 PF14237 AM480_19990 AM480_19995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM480_19995 PF06481 COX Aromatic Rich Motif AM480_20000 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM480_20005 PF00510 Cytochrome c oxidase subunit III AM480_20010 PF03626 AM480_20010 AM480_20015 PF01040 UbiA prenyltransferase family AM480_20020 PF01250 Ribosomal protein S6 AM480_20025 PF01084 Ribosomal protein S18 AM480_20030 PF01281 Ribosomal protein L9, N-terminal domain AM480_20030 PF03948 Ribosomal protein L9, C-terminal domain AM480_20035 PF00772 DnaB-like helicase N terminal domain AM480_20035 PF03796 DnaB-like helicase C terminal domain AM480_20040 PF00842 Alanine racemase, C-terminal domain AM480_20040 PF01168 Alanine racemase, N-terminal domain AM480_20045 PF00227 Proteasome subunit AM480_20050 PF01841 Transglutaminase-like superfamily AM480_20050 PF08379 AM480_20050 AM480_20055 PF04168 AM480_20055 AM480_20060 PF14403 AM480_20060 AM480_20065 PF13280 AM480_20065 AM480_20070 PF01134 Glucose inhibited division protein A AM480_20070 PF13932 GidA associated domain 3 AM480_20080 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AM480_20085 PF11906 AM480_20085 AM480_20090 PF02954 Bacterial regulatory protein, Fis family AM480_20095 PF01808 AICARFT/IMPCHase bienzyme AM480_20095 PF02142 MGS-like domain AM480_20100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM480_20100 PF02843 Phosphoribosylglycinamide synthetase, C domain AM480_20100 PF02844 Phosphoribosylglycinamide synthetase, N domain AM480_20105 PF03180 NLPA lipoprotein AM480_20110 PF00005 ABC transporter AM480_20110 PF09383 NIL domain AM480_20115 PF00528 Binding-protein-dependent transport system inner membrane component AM480_20120 PF00753 Metallo-beta-lactamase superfamily AM480_20120 PF16123 AM480_20120 AM480_20130 PF00375 Sodium:dicarboxylate symporter family AM480_20135 PF00440 Bacterial regulatory proteins, tetR family AM480_20135 PF16859 AM480_20135 AM480_20140 PF07690 Major Facilitator Superfamily AM480_20145 PF13673 Acetyltransferase (GNAT) domain AM480_20150 PF07995 Glucose / Sorbosone dehydrogenase AM480_20155 PF00892 EamA-like transporter family AM480_20160 PF01177 Asp/Glu/Hydantoin racemase AM480_20165 PF03886 Protein of unknown function (DUF330) AM480_20170 PF02470 AM480_20170 AM480_20175 PF04403 AM480_20175 AM480_20180 PF04403 AM480_20180 AM480_20190 PF02080 TrkA-C domain AM480_20190 PF06826 AM480_20190 AM480_20195 PF00155 Aminotransferase class I and II AM480_20200 PF00892 EamA-like transporter family AM480_20205 PF00440 Bacterial regulatory proteins, tetR family AM480_20215 PF00083 Sugar (and other) transporter AM480_20215 PF08946 Osmosensory transporter coiled coil AM480_20225 PF05229 AM480_20225 AM480_20230 PF00577 Outer membrane usher protein AM480_20230 PF13953 PapC C-terminal domain AM480_20235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM480_20240 PF05229 AM480_20240 AM480_20245 PF05229 AM480_20245 AM480_20250 PF05229 AM480_20250 AM480_20255 PF00665 Integrase core domain AM480_20255 PF13936 Helix-turn-helix domain AM480_20265 PF00440 Bacterial regulatory proteins, tetR family AM480_20275 PF00392 Bacterial regulatory proteins, gntR family AM480_20275 PF07729 FCD domain AM480_20280 PF05673 Protein of unknown function (DUF815) AM480_20285 PF03616 AM480_20285 AM480_20290 PF00561 alpha/beta hydrolase fold AM480_20295 PF02311 AraC-like ligand binding domain AM480_20295 PF12833 Helix-turn-helix domain AM480_20300 PF01810 AM480_20300 AM480_20310 PF04940 Sensors of blue-light using FAD AM480_20315 PF04076 Bacterial OB fold (BOF) protein AM480_20320 PF00535 Glycosyl transferase family 2 AM480_20325 PF05401 Nodulation protein S (NodS) AM480_20330 PF02585 GlcNAc-PI de-N-acetylase AM480_20340 PF09939 AM480_20340 AM480_20345 PF00324 Amino acid permease AM480_20350 PF00171 Aldehyde dehydrogenase family AM480_20355 PF00202 Aminotransferase class-III AM480_20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM480_20360 PF03466 LysR substrate binding domain AM480_20365 PF00440 Bacterial regulatory proteins, tetR family AM480_20390 PF04829 AM480_20390 AM480_20405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM480_20405 PF08479 POTRA domain, ShlB-type AM480_20405 PF17287 AM480_20405 AM480_20430 PF00069 Protein kinase domain AM480_20435 PF01734 Patatin-like phospholipase AM480_20435 PF11815 AM480_20435 AM480_20440 PF05673 Protein of unknown function (DUF815) AM480_20450 PF00814 Glycoprotease family AM480_20455 PF01165 Ribosomal protein S21 AM480_20460 PF09424 Yqey-like protein AM480_20465 PF01435 Peptidase family M48 AM480_20470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM480_20470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM480_20480 PF01435 Peptidase family M48 AM480_20485 PF00156 Phosphoribosyl transferase domain AM480_20485 PF13522 Glutamine amidotransferase domain AM480_20490 PF02674 AM480_20490 AM480_20495 PF01180 Dihydroorotate dehydrogenase AM480_20500 PF04612 Type II secretion system (T2SS), protein M AM480_20505 PF05134 Type II secretion system (T2SS), protein L AM480_20505 PF12693 GspL periplasmic domain AM480_20510 PF00300 Histidine phosphatase superfamily (branch 1) AM480_20515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM480_20515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM480_20520 PF00881 Nitroreductase family AM480_20530 PF00270 DEAD/DEAH box helicase AM480_20530 PF00271 Helicase conserved C-terminal domain AM480_20535 PF00313 'Cold-shock' DNA-binding domain AM480_20540 PF01206 Sulfurtransferase TusA AM480_20545 PF00140 Sigma-70 factor, region 1 AM480_20545 PF04542 Sigma-70 region 2 AM480_20545 PF04545 Sigma-70, region 4 AM480_20550 PF04241 AM480_20550 AM480_20555 PF02597 ThiS family AM480_20560 PF05690 Thiazole biosynthesis protein ThiG AM480_20570 PF03883 AM480_20570 AM480_20580 PF00753 Metallo-beta-lactamase superfamily AM480_20585 PF01546 Peptidase family M20/M25/M40 AM480_20585 PF07687 Peptidase dimerisation domain AM480_20595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM480_20595 PF02153 Prephenate dehydrogenase AM480_20600 PF00800 Prephenate dehydratase AM480_20600 PF01817 Chorismate mutase type II AM480_20600 PF01842 ACT domain AM480_20605 PF00756 Putative esterase AM480_20610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM480_20610 PF02770 Acyl-CoA dehydrogenase, middle domain AM480_20610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM480_20615 PF00375 Sodium:dicarboxylate symporter family AM480_20625 PF00591 Glycosyl transferase family, a/b domain AM480_20625 PF02885 Glycosyl transferase family, helical bundle domain AM480_20630 PF07023 AM480_20630 AM480_20635 PF01513 ATP-NAD kinase AM480_20640 PF00905 Penicillin binding protein transpeptidase domain AM480_20640 PF00912 Transglycosylase AM480_20640 PF14814 Bifunctional transglycosylase second domain AM480_20650 PF00293 NUDIX domain AM480_20650 PF02581 Thiamine monophosphate synthase/TENI AM480_20655 PF10636 Hemin uptake protein hemP AM480_20660 PF00512 His Kinase A (phospho-acceptor) domain AM480_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM480_20665 PF00072 Response regulator receiver domain AM480_20665 PF00486 Transcriptional regulatory protein, C terminal AM480_20670 PF04076 Bacterial OB fold (BOF) protein AM480_20675 PF00437 Type II/IV secretion system protein AM480_20675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM480_20680 PF02308 AM480_20680 AM480_20680 PF13194 AM480_20680 AM480_20685 PF01980 Uncharacterised protein family UPF0066 AM480_20690 PF00175 Oxidoreductase NAD-binding domain AM480_20690 PF00970 Oxidoreductase FAD-binding domain AM480_20695 PF02567 Phenazine biosynthesis-like protein AM480_20700 PF00155 Aminotransferase class I and II AM480_20700 PF00392 Bacterial regulatory proteins, gntR family AM480_20705 PF01136 AM480_20705 AM480_20705 PF16325 AM480_20705 AM480_20715 PF00893 Small Multidrug Resistance protein AM480_20720 PF00005 ABC transporter AM480_20725 PF00528 Binding-protein-dependent transport system inner membrane component AM480_20730 PF00528 Binding-protein-dependent transport system inner membrane component AM480_20735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM480_20745 PF16576 AM480_20745 AM480_20750 PF00873 AcrB/AcrD/AcrF family AM480_20755 PF02321 Outer membrane efflux protein AM480_20760 PF00464 Serine hydroxymethyltransferase AM480_20770 PF03583 Secretory lipase AM480_20775 PF12843 AM480_20775 AM480_20795 PF05838 Glycosyl hydrolase 108 AM480_20795 PF09374 Predicted Peptidoglycan domain AM480_20805 PF13550 AM480_20805 AM480_20810 PF06805 AM480_20810 AM480_20815 PF00877 NlpC/P60 family AM480_20815 PF14464 Prokaryotic homologs of the JAB domain