locus-tag class description AM481_00005 PF01807 CHC2 zinc finger AM481_00005 PF08278 DNA primase DnaG DnaB-binding AM481_00005 PF10410 DnaB-helicase binding domain of primase AM481_00005 PF08275 DNA primase catalytic core, N-terminal domain AM481_00010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM481_00010 PF01488 Shikimate / quinate 5-dehydrogenase AM481_00010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM481_00020 PF03550 Outer membrane lipoprotein LolB AM481_00025 PF00288 GHMP kinases N terminal domain AM481_00025 PF08544 GHMP kinases C terminal AM481_00050 PF14572 Phosphoribosyl synthetase-associated domain AM481_00050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM481_00055 PF01386 Ribosomal L25p family AM481_00060 PF01195 Peptidyl-tRNA hydrolase AM481_00065 PF02261 Aspartate decarboxylase AM481_00080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM481_00090 PF02581 Thiamine monophosphate synthase AM481_00090 PF08543 Phosphomethylpyrimidine kinase AM481_00090 PF03070 TENA/THI-4/PQQC family AM481_00095 PF01476 LysM domain AM481_00095 PF04972 BON domain AM481_00100 PF00550 Phosphopantetheine attachment site AM481_00110 PF00698 Acyl transferase domain AM481_00115 PF01783 Ribosomal L32p protein family AM481_00120 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM481_00125 PF04315 Elongation factor P hydroxylase AM481_00130 PF01300 Telomere recombination AM481_00135 PF02616 Segregation and condensation protein ScpA AM481_00140 PF04079 Segregation and condensation complex subunit ScpB AM481_00145 PF01479 S4 domain AM481_00145 PF00849 RNA pseudouridylate synthase AM481_00160 PF00155 Aminotransferase class I and II AM481_00165 PF04055 Radical SAM superfamily AM481_00165 PF06968 Biotin and Thiamin Synthesis associated domain AM481_00165 PF00202 Aminotransferase class-III AM481_00170 PF12697 Alpha/beta hydrolase family AM481_00170 PF08241 Methyltransferase domain AM481_00175 PF02358 Trehalose-phosphatase AM481_00180 PF00982 Glycosyltransferase family 20 AM481_00185 PF07690 Major Facilitator Superfamily AM481_00190 PF00210 Ferritin-like domain AM481_00195 PF00533 BRCA1 C Terminus (BRCT) domain AM481_00195 PF01653 NAD-dependent DNA ligase adenylation domain AM481_00195 PF03120 NAD-dependent DNA ligase OB-fold domain AM481_00195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM481_00195 PF12826 Helix-hairpin-helix motif AM481_00205 PF02463 RecF/RecN/SMC N terminal domain AM481_00205 PF06470 SMC proteins Flexible Hinge Domain AM481_00215 PF01925 Sulfite exporter TauE/SafE AM481_00225 PF03309 Type III pantothenate kinase AM481_00230 PF02978 Signal peptide binding domain AM481_00230 PF02881 SRP54-type protein, helical bundle domain AM481_00230 PF00448 SRP54-type protein, GTPase domain AM481_00240 PF01207 Dihydrouridine synthase (Dus) AM481_00275 PF00692 dUTPase AM481_00290 PF01048 Phosphorylase superfamily AM481_00300 PF10609 NUBPL iron-transfer P-loop NTPase AM481_00310 PF01588 Putative tRNA binding domain AM481_00310 PF09334 tRNA synthetases class I (M) AM481_00335 PF13533 Biotin-lipoyl like AM481_00340 PF00291 Pyridoxal-phosphate dependent enzyme AM481_00355 PF05552 Conserved TM helix AM481_00370 PF00970 Oxidoreductase FAD-binding domain AM481_00370 PF00175 Oxidoreductase NAD-binding domain AM481_00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_00375 PF03466 LysR substrate binding domain AM481_00380 PF00313 'Cold-shock' DNA-binding domain AM481_00390 PF00361 Proton-conducting membrane transporter AM481_00395 PF00361 Proton-conducting membrane transporter AM481_00400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM481_00400 PF00361 Proton-conducting membrane transporter AM481_00405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM481_00410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM481_00415 PF12838 4Fe-4S dicluster domain AM481_00420 PF00146 NADH dehydrogenase AM481_00425 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM481_00425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM481_00425 PF00384 Molybdopterin oxidoreductase AM481_00430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM481_00430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM481_00430 PF10531 SLBB domain AM481_00440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM481_00440 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM481_00445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM481_00450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM481_00455 PF00990 Diguanylate cyclase, GGDEF domain AM481_00455 PF17151 Periplasmic sensor domain AM481_00465 PF00512 His Kinase A (phospho-acceptor) domain AM481_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_00465 PF00672 HAMP domain AM481_00470 PF00072 Response regulator receiver domain AM481_00470 PF00486 Transcriptional regulatory protein, C terminal AM481_00480 PF03477 ATP cone domain AM481_00480 PF02867 Ribonucleotide reductase, barrel domain AM481_00480 PF00317 Ribonucleotide reductase, all-alpha domain AM481_00490 PF00268 Ribonucleotide reductase, small chain AM481_00500 PF13755 Sensor N-terminal transmembrane domain AM481_00500 PF00512 His Kinase A (phospho-acceptor) domain AM481_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_00500 PF00672 HAMP domain AM481_00500 PF13756 Stimulus-sensing domain AM481_00570 PF01011 PQQ enzyme repeat AM481_00570 PF13360 PQQ-like domain AM481_00590 PF02567 Phenazine biosynthesis-like protein AM481_00620 PF01613 Flavin reductase like domain AM481_00625 PF01717 Cobalamin-independent synthase, Catalytic domain AM481_00625 PF08267 Cobalamin-independent synthase, N-terminal domain AM481_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_00635 PF03466 LysR substrate binding domain AM481_00640 PF01810 LysE type translocator AM481_00650 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM481_00650 PF12833 Helix-turn-helix domain AM481_00655 PF01546 Peptidase family M20/M25/M40 AM481_00655 PF07687 Peptidase dimerisation domain AM481_00665 PF03466 LysR substrate binding domain AM481_00665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_00675 PF07690 Major Facilitator Superfamily AM481_00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_00685 PF03466 LysR substrate binding domain AM481_00690 PF00890 FAD binding domain AM481_00690 PF14537 Cytochrome c3 AM481_00700 PF02515 CoA-transferase family III AM481_00705 PF07690 Major Facilitator Superfamily AM481_00710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_00710 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_00710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_00715 PF03466 LysR substrate binding domain AM481_00720 PF08240 Alcohol dehydrogenase GroES-like domain AM481_00720 PF00107 Zinc-binding dehydrogenase AM481_00725 PF00962 Adenosine/AMP deaminase AM481_00750 PF02445 Quinolinate synthetase A protein AM481_00755 PF01960 ArgJ family AM481_00760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM481_00760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM481_00765 PF00893 Small Multidrug Resistance protein AM481_00775 PF05275 Copper resistance protein B precursor (CopB) AM481_00780 PF07732 Multicopper oxidase AM481_00780 PF07731 Multicopper oxidase AM481_00780 PF00394 Multicopper oxidase AM481_00795 PF00834 Ribulose-phosphate 3 epimerase family AM481_00805 PF00756 Putative esterase AM481_00815 PF04445 Putative SAM-dependent methyltransferase AM481_00820 PF00814 Glycoprotease family AM481_00825 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_00830 PF00293 NUDIX domain AM481_00870 PF04715 Anthranilate synthase component I, N terminal region AM481_00870 PF00425 chorismate binding enzyme AM481_00875 PF00155 Aminotransferase class I and II AM481_00880 PF00815 Histidinol dehydrogenase AM481_00885 PF01634 ATP phosphoribosyltransferase AM481_00890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM481_00895 PF01722 BolA-like protein AM481_00900 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM481_00905 PF04552 Sigma-54, DNA binding domain AM481_00905 PF04963 Sigma-54 factor, core binding domain AM481_00905 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM481_00950 PF00795 Carbon-nitrogen hydrolase AM481_00960 PF01047 MarR family AM481_00965 PF02566 OsmC-like protein AM481_00970 PF00437 Type II/IV secretion system protein AM481_00990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM481_00990 PF01367 5'-3' exonuclease, C-terminal SAM fold AM481_00990 PF01612 3'-5' exonuclease AM481_00990 PF00476 DNA polymerase family A AM481_00995 PF02325 YGGT family AM481_01000 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM481_01000 PF03807 NADP oxidoreductase coenzyme F420-dependent AM481_01005 PF01171 PP-loop family AM481_01005 PF09179 TilS substrate binding domain AM481_01005 PF11734 TilS substrate C-terminal domain AM481_01010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM481_01015 PF02541 Ppx/GppA phosphatase family AM481_01020 PF00085 Thioredoxin AM481_01025 PF07498 Rho termination factor, N-terminal domain AM481_01025 PF07497 Rho termination factor, RNA-binding domain AM481_01025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM481_01040 PF00216 Bacterial DNA-binding protein AM481_01045 PF03147 Ferredoxin-fold anticodon binding domain AM481_01045 PF01588 Putative tRNA binding domain AM481_01045 PF03484 tRNA synthetase B5 domain AM481_01045 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM481_01045 PF03483 B3/4 domain AM481_01050 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM481_01050 PF01409 tRNA synthetases class II core domain (F) AM481_01070 PF00453 Ribosomal protein L20 AM481_01075 PF01632 Ribosomal protein L35 AM481_01080 PF07690 Major Facilitator Superfamily AM481_01085 PF09335 SNARE associated Golgi protein AM481_01090 PF00043 Glutathione S-transferase, C-terminal domain AM481_01090 PF02798 Glutathione S-transferase, N-terminal domain AM481_01100 PF00707 Translation initiation factor IF-3, C-terminal domain AM481_01100 PF05198 Translation initiation factor IF-3, N-terminal domain AM481_01105 PF02824 TGS domain AM481_01105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM481_01105 PF03129 Anticodon binding domain AM481_01105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM481_01110 PF00501 AMP-binding enzyme AM481_01110 PF13193 AMP-binding enzyme C-terminal domain AM481_01115 PF04751 Protein of unknown function (DUF615) AM481_01120 PF00381 PTS HPr component phosphorylation site AM481_01125 PF03668 P-loop ATPase protein family AM481_01130 PF02569 Pantoate-beta-alanine ligase AM481_01135 PF02548 Ketopantoate hydroxymethyltransferase AM481_01140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM481_01145 PF12627 Probable RNA and SrmB- binding site of polymerase A AM481_01145 PF12626 Polymerase A arginine-rich C-terminus AM481_01145 PF01743 Poly A polymerase head domain AM481_01155 PF03819 MazG nucleotide pyrophosphohydrolase domain AM481_01165 PF02824 TGS domain AM481_01165 PF13291 ACT domain AM481_01165 PF04607 Region found in RelA / SpoT proteins AM481_01170 PF05958 tRNA (Uracil-5-)-methyltransferase AM481_01180 PF00291 Pyridoxal-phosphate dependent enzyme AM481_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_01185 PF00672 HAMP domain AM481_01185 PF00512 His Kinase A (phospho-acceptor) domain AM481_01185 PF00072 Response regulator receiver domain AM481_01185 PF01627 Hpt domain AM481_01185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM481_01190 PF00378 Enoyl-CoA hydratase/isomerase AM481_01195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM481_01195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM481_01200 PF01261 Xylose isomerase-like TIM barrel AM481_01210 PF00106 short chain dehydrogenase AM481_01215 PF02233 NAD(P) transhydrogenase beta subunit AM481_01220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM481_01225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM481_01225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM481_01230 PF00892 EamA-like transporter family AM481_01240 PF07690 Major Facilitator Superfamily AM481_01245 PF01207 Dihydrouridine synthase (Dus) AM481_01255 PF03466 LysR substrate binding domain AM481_01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_01265 PF00899 ThiF family AM481_01275 PF00694 Aconitase C-terminal domain AM481_01275 PF00330 Aconitase family (aconitate hydratase) AM481_01280 PF01026 TatD related DNase AM481_01295 PF00009 Elongation factor Tu GTP binding domain AM481_01295 PF03144 Elongation factor Tu domain 2 AM481_01295 PF16658 Class II release factor RF3, C-terminal domain AM481_01320 PF03707 Bacterial signalling protein N terminal repeat AM481_01320 PF00563 EAL domain AM481_01320 PF00990 Diguanylate cyclase, GGDEF domain AM481_01325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM481_01325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM481_01330 PF10369 Small subunit of acetolactate synthase AM481_01335 PF00205 Thiamine pyrophosphate enzyme, central domain AM481_01335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM481_01335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM481_01345 PF09334 tRNA synthetases class I (M) AM481_01345 PF08264 Anticodon-binding domain of tRNA AM481_01345 PF00133 tRNA synthetases class I (I, L, M and V) AM481_01345 PF13603 Leucyl-tRNA synthetase, Domain 2 AM481_01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_01365 PF12704 MacB-like periplasmic core domain AM481_01365 PF02687 FtsX-like permease family AM481_01365 PF00005 ABC transporter AM481_01370 PF02321 Outer membrane efflux protein AM481_01385 PF00929 Exonuclease AM481_01390 PF03193 RsgA GTPase AM481_01400 PF00462 Glutaredoxin AM481_01405 PF02556 Preprotein translocase subunit SecB AM481_01420 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_01420 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_01435 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_01435 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_01445 PF04820 Tryptophan halogenase AM481_01465 PF00221 Aromatic amino acid lyase AM481_01480 PF13193 AMP-binding enzyme C-terminal domain AM481_01480 PF00501 AMP-binding enzyme AM481_01490 PF00550 Phosphopantetheine attachment site AM481_01495 PF00550 Phosphopantetheine attachment site AM481_01510 PF01926 50S ribosome-binding GTPase AM481_01510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM481_01515 PF13360 PQQ-like domain AM481_01525 PF03129 Anticodon binding domain AM481_01525 PF13393 Histidyl-tRNA synthetase AM481_01530 PF04551 GcpE protein AM481_01535 PF13464 Domain of unknown function (DUF4115) AM481_01545 PF04055 Radical SAM superfamily AM481_01550 PF00334 Nucleoside diphosphate kinase AM481_01555 PF04384 Iron-sulphur cluster assembly AM481_01560 PF01569 PAP2 superfamily AM481_01565 PF00534 Glycosyl transferases group 1 AM481_01565 PF13439 Glycosyltransferase Family 4 AM481_01570 PF17804 Tail specific protease N-terminal domain AM481_01570 PF00595 PDZ domain AM481_01570 PF03572 Peptidase family S41 AM481_01570 PF11818 C-terminal domain of tail specific protease (DUF3340) AM481_01575 PF00933 Glycosyl hydrolase family 3 N terminal domain AM481_01585 PF00561 alpha/beta hydrolase fold AM481_01590 PF00171 Aldehyde dehydrogenase family AM481_01595 PF00171 Aldehyde dehydrogenase family AM481_01600 PF01202 Shikimate kinase AM481_01605 PF02447 GntP family permease AM481_01610 PF01081 KDPG and KHG aldolase AM481_01615 PF00920 Dehydratase family AM481_01620 PF00871 Acetokinase family AM481_01625 PF07085 DRTGG domain AM481_01625 PF01515 Phosphate acetyl/butaryl transferase AM481_01630 PF05681 Fumarate hydratase (Fumerase) AM481_01630 PF05683 Fumarase C-terminus AM481_01645 PF10431 C-terminal, D2-small domain, of ClpB protein AM481_01645 PF07724 AAA domain (Cdc48 subfamily) AM481_01645 PF06689 ClpX C4-type zinc finger AM481_01650 PF00574 Clp protease AM481_01655 PF05697 Bacterial trigger factor protein (TF) AM481_01655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_01655 PF05698 Bacterial trigger factor protein (TF) C-terminus AM481_01660 PF00593 TonB dependent receptor AM481_01660 PF07715 TonB-dependent Receptor Plug Domain AM481_01665 PF13640 2OG-Fe(II) oxygenase superfamily AM481_01665 PF18331 PKHD-type hydroxylase C-terminal domain AM481_01670 PF00682 HMGL-like AM481_01670 PF08502 LeuA allosteric (dimerisation) domain AM481_01675 PF00561 alpha/beta hydrolase fold AM481_01680 PF00561 alpha/beta hydrolase fold AM481_01680 PF07021 Methionine biosynthesis protein MetW AM481_01690 PF01725 Ham1 family AM481_01700 PF02416 mttA/Hcf106 family AM481_01705 PF02416 mttA/Hcf106 family AM481_01710 PF00902 Sec-independent protein translocase protein (TatC) AM481_01730 PF01790 Prolipoprotein diacylglyceryl transferase AM481_01745 PF00303 Thymidylate synthase AM481_01750 PF00186 Dihydrofolate reductase AM481_01760 PF01625 Peptide methionine sulfoxide reductase AM481_01770 PF01618 MotA/TolQ/ExbB proton channel family AM481_01780 PF01842 ACT domain AM481_01780 PF00551 Formyl transferase AM481_01790 PF00171 Aldehyde dehydrogenase family AM481_01795 PF00830 Ribosomal L28 family AM481_01800 PF00471 Ribosomal protein L33 AM481_01805 PF02254 TrkA-N domain AM481_01805 PF00999 Sodium/hydrogen exchanger family AM481_01825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AM481_01830 PF00580 UvrD/REP helicase N-terminal domain AM481_01830 PF13361 UvrD-like helicase C-terminal domain AM481_01845 PF01751 Toprim domain AM481_01845 PF08272 Topoisomerase I zinc-ribbon-like AM481_01845 PF01131 DNA topoisomerase AM481_01845 PF01396 Topoisomerase DNA binding C4 zinc finger AM481_01855 PF01638 HxlR-like helix-turn-helix AM481_01860 PF00107 Zinc-binding dehydrogenase AM481_01860 PF08240 Alcohol dehydrogenase GroES-like domain AM481_01875 PF01810 LysE type translocator AM481_01880 PF03279 Bacterial lipid A biosynthesis acyltransferase AM481_01890 PF00375 Sodium:dicarboxylate symporter family AM481_01900 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM481_01900 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM481_01920 PF01416 tRNA pseudouridine synthase AM481_01930 PF01176 Translation initiation factor 1A / IF-1 AM481_01945 PF00180 Isocitrate/isopropylmalate dehydrogenase AM481_01955 PF00694 Aconitase C-terminal domain AM481_01960 PF00330 Aconitase family (aconitate hydratase) AM481_01970 PF03466 LysR substrate binding domain AM481_01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_01990 PF00293 NUDIX domain AM481_01995 PF01590 GAF domain AM481_01995 PF02896 PEP-utilising enzyme, TIM barrel domain AM481_01995 PF00391 PEP-utilising enzyme, mobile domain AM481_01995 PF05524 PEP-utilising enzyme, N-terminal AM481_02000 PF00141 Peroxidase AM481_02005 PF12706 Beta-lactamase superfamily domain AM481_02010 PF03466 LysR substrate binding domain AM481_02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_02020 PF02798 Glutathione S-transferase, N-terminal domain AM481_02025 PF08279 HTH domain AM481_02025 PF13280 WYL domain AM481_02030 PF13419 Haloacid dehalogenase-like hydrolase AM481_02035 PF00849 RNA pseudouridylate synthase AM481_02035 PF01479 S4 domain AM481_02045 PF00575 S1 RNA binding domain AM481_02045 PF12111 Polyribonucleotide phosphorylase C terminal AM481_02045 PF10150 Ribonuclease E/G family AM481_02050 PF00501 AMP-binding enzyme AM481_02050 PF13193 AMP-binding enzyme C-terminal domain AM481_02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_02065 PF03466 LysR substrate binding domain AM481_02070 PF00106 short chain dehydrogenase AM481_02075 PF06969 HemN C-terminal domain AM481_02075 PF04055 Radical SAM superfamily AM481_02085 PF01554 MatE AM481_02090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_02090 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_02090 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM481_02095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_02095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM481_02100 PF03109 ABC1 family AM481_02105 PF01197 Ribosomal protein L31 AM481_02120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM481_02140 PF03884 DNA gyrase inhibitor YacG AM481_02145 PF00753 Metallo-beta-lactamase superfamily AM481_02150 PF00762 Ferrochelatase AM481_02160 PF01177 Asp/Glu/Hydantoin racemase AM481_02175 PF01206 Sulfurtransferase TusA AM481_02180 PF00571 CBS domain AM481_02180 PF03471 Transporter associated domain AM481_02185 PF00795 Carbon-nitrogen hydrolase AM481_02190 PF01588 Putative tRNA binding domain AM481_02200 PF07963 Prokaryotic N-terminal methylation motif AM481_02200 PF08334 Type II secretion system (T2SS), protein G AM481_02205 PF00482 Type II secretion system (T2SS), protein F AM481_02210 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM481_02210 PF18074 Primosomal protein N C-terminal domain AM481_02210 PF17764 3′ DNA-binding domain (3′BD) AM481_02210 PF00271 Helicase conserved C-terminal domain AM481_02210 PF00270 DEAD/DEAH box helicase AM481_02215 PF02254 TrkA-N domain AM481_02215 PF00999 Sodium/hydrogen exchanger family AM481_02220 PF01430 Hsp33 protein AM481_02230 PF00226 DnaJ domain AM481_02230 PF01556 DnaJ C terminal domain AM481_02240 PF01544 CorA-like Mg2+ transporter protein AM481_02245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM481_02245 PF00575 S1 RNA binding domain AM481_02245 PF00013 KH domain AM481_02245 PF03725 3' exoribonuclease family, domain 2 AM481_02245 PF01138 3' exoribonuclease family, domain 1 AM481_02250 PF00312 Ribosomal protein S15 AM481_02260 PF13538 UvrD-like helicase C-terminal domain AM481_02265 PF12705 PD-(D/E)XK nuclease superfamily AM481_02265 PF00580 UvrD/REP helicase N-terminal domain AM481_02265 PF13361 UvrD-like helicase C-terminal domain AM481_02270 PF17946 RecC C-terminal domain AM481_02280 PF03976 Polyphosphate kinase 2 (PPK2) AM481_02290 PF01209 ubiE/COQ5 methyltransferase family AM481_02300 PF03109 ABC1 family AM481_02305 PF01494 FAD binding domain AM481_02310 PF01502 Phosphoribosyl-AMP cyclohydrolase AM481_02325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM481_02325 PF00361 Proton-conducting membrane transporter AM481_02325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AM481_02325 PF13244 Domain of unknown function (DUF4040) AM481_02330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM481_02335 PF00361 Proton-conducting membrane transporter AM481_02345 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AM481_02355 PF02033 Ribosome-binding factor A AM481_02360 PF00009 Elongation factor Tu GTP binding domain AM481_02360 PF11987 Translation-initiation factor 2 AM481_02360 PF08364 Bacterial translation initiation factor IF-2 associated region AM481_02360 PF04760 Translation initiation factor IF-2, N-terminal region AM481_02365 PF13184 NusA-like KH domain AM481_02365 PF08529 NusA N-terminal domain AM481_02365 PF00575 S1 RNA binding domain AM481_02370 PF17384 RimP C-terminal SH3 domain AM481_02370 PF02576 RimP N-terminal domain AM481_02390 PF03840 Preprotein translocase SecG subunit AM481_02395 PF00121 Triosephosphate isomerase AM481_02400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM481_02400 PF00437 Type II/IV secretion system protein AM481_02405 PF00482 Type II secretion system (T2SS), protein F AM481_02410 PF06750 Bacterial Peptidase A24 N-terminal domain AM481_02410 PF01478 Type IV leader peptidase family AM481_02415 PF01121 Dephospho-CoA kinase AM481_02425 PF00588 SpoU rRNA Methylase family AM481_02425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM481_02430 PF06865 Pyrimidine/purine nucleoside phosphorylase AM481_02440 PF02463 RecF/RecN/SMC N terminal domain AM481_02445 PF02622 Uncharacterized ACR, COG1678 AM481_02450 PF03652 Holliday junction resolvase AM481_02455 PF13533 Biotin-lipoyl like AM481_02480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM481_02480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM481_02480 PF12833 Helix-turn-helix domain AM481_02480 PF02805 Metal binding domain of Ada AM481_02485 PF01066 CDP-alcohol phosphatidyltransferase AM481_02495 PF08459 UvrC Helix-hairpin-helix N-terminal AM481_02495 PF02151 UvrB/uvrC motif AM481_02495 PF01541 GIY-YIG catalytic domain AM481_02520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM481_02520 PF00378 Enoyl-CoA hydratase/isomerase AM481_02520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM481_02525 PF02803 Thiolase, C-terminal domain AM481_02525 PF00108 Thiolase, N-terminal domain AM481_02545 PF09278 MerR, DNA binding AM481_02545 PF00376 MerR family regulatory protein AM481_02555 PF01323 DSBA-like thioredoxin domain AM481_02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_02570 PF00183 Hsp90 protein AM481_02585 PF03553 Na+/H+ antiporter family AM481_02585 PF13726 Na+-H+ antiporter family AM481_02590 PF00561 alpha/beta hydrolase fold AM481_02610 PF04997 RNA polymerase Rpb1, domain 1 AM481_02610 PF05000 RNA polymerase Rpb1, domain 4 AM481_02610 PF04998 RNA polymerase Rpb1, domain 5 AM481_02610 PF04983 RNA polymerase Rpb1, domain 3 AM481_02610 PF00623 RNA polymerase Rpb1, domain 2 AM481_02615 PF10385 RNA polymerase beta subunit external 1 domain AM481_02615 PF04565 RNA polymerase Rpb2, domain 3 AM481_02615 PF04563 RNA polymerase beta subunit AM481_02615 PF04561 RNA polymerase Rpb2, domain 2 AM481_02615 PF00562 RNA polymerase Rpb2, domain 6 AM481_02615 PF04560 RNA polymerase Rpb2, domain 7 AM481_02620 PF16320 Ribosomal protein L7/L12 dimerisation domain AM481_02620 PF00542 Ribosomal protein L7/L12 C-terminal domain AM481_02625 PF00466 Ribosomal protein L10 AM481_02630 PF00687 Ribosomal protein L1p/L10e family AM481_02635 PF00298 Ribosomal protein L11, RNA binding domain AM481_02635 PF03946 Ribosomal protein L11, N-terminal domain AM481_02640 PF00467 KOW motif AM481_02640 PF02357 Transcription termination factor nusG AM481_02645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM481_02655 PF00009 Elongation factor Tu GTP binding domain AM481_02655 PF03144 Elongation factor Tu domain 2 AM481_02655 PF03143 Elongation factor Tu C-terminal domain AM481_02680 PF04715 Anthranilate synthase component I, N terminal region AM481_02680 PF00425 chorismate binding enzyme AM481_02685 PF13419 Haloacid dehalogenase-like hydrolase AM481_02690 PF12401 Protein of unknown function (DUF2662) AM481_02690 PF00498 FHA domain AM481_02695 PF00263 Bacterial type II and III secretion system protein AM481_02695 PF03958 Bacterial type II/III secretion system short domain AM481_02710 PF00816 H-NS histone family AM481_02735 PF03900 Porphobilinogen deaminase, C-terminal domain AM481_02735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM481_02740 PF00072 Response regulator receiver domain AM481_02740 PF04397 LytTr DNA-binding domain AM481_02745 PF07694 5TMR of 5TMR-LYT AM481_02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_02745 PF06580 Histidine kinase AM481_02750 PF14698 Argininosuccinate lyase C-terminal AM481_02750 PF00206 Lyase AM481_02755 PF04362 Bacterial Fe(2+) trafficking AM481_02760 PF01895 PhoU domain AM481_02765 PF02321 Outer membrane efflux protein AM481_02770 PF00892 EamA-like transporter family AM481_02785 PF13667 ThiC-associated domain AM481_02785 PF01964 Radical SAM ThiC family AM481_02790 PF00293 NUDIX domain AM481_02795 PF00149 Calcineurin-like phosphoesterase AM481_02800 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM481_02805 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM481_02810 PF01098 Cell cycle protein AM481_02815 PF02875 Mur ligase family, glutamate ligase domain AM481_02815 PF08245 Mur ligase middle domain AM481_02825 PF02421 Ferrous iron transport protein B AM481_02825 PF07670 Nucleoside recognition AM481_02825 PF07664 Ferrous iron transport protein B C terminus AM481_02835 PF02899 Phage integrase, N-terminal SAM-like domain AM481_02835 PF00589 Phage integrase family AM481_02840 PF13098 Thioredoxin-like domain AM481_02840 PF10411 Disulfide bond isomerase protein N-terminus AM481_02845 PF00742 Homoserine dehydrogenase AM481_02845 PF03447 Homoserine dehydrogenase, NAD binding domain AM481_02845 PF01842 ACT domain AM481_02850 PF00291 Pyridoxal-phosphate dependent enzyme AM481_02855 PF00768 D-alanyl-D-alanine carboxypeptidase AM481_02860 PF00196 Bacterial regulatory proteins, luxR family AM481_02860 PF00072 Response regulator receiver domain AM481_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_02865 PF00512 His Kinase A (phospho-acceptor) domain AM481_02870 PF00158 Sigma-54 interaction domain AM481_02870 PF00072 Response regulator receiver domain AM481_02870 PF02954 Bacterial regulatory protein, Fis family AM481_02875 PF03572 Peptidase family S41 AM481_02875 PF00595 PDZ domain AM481_02880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM481_02880 PF01676 Metalloenzyme superfamily AM481_02885 PF03739 Lipopolysaccharide export system permease LptF/LptG AM481_02895 PF02789 Cytosol aminopeptidase family, N-terminal domain AM481_02895 PF00883 Cytosol aminopeptidase family, catalytic domain AM481_02915 PF00677 Lumazine binding domain AM481_02925 PF01872 RibD C-terminal domain AM481_02925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM481_02930 PF03477 ATP cone domain AM481_02935 PF00909 Ammonium Transporter Family AM481_02940 PF00543 Nitrogen regulatory protein P-II AM481_02950 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM481_02950 PF01078 Magnesium chelatase, subunit ChlI AM481_02960 PF01636 Phosphotransferase enzyme family AM481_02965 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM481_02990 PF00440 Bacterial regulatory proteins, tetR family AM481_02990 PF02909 Tetracyclin repressor-like, C-terminal domain AM481_02995 PF07690 Major Facilitator Superfamily AM481_03005 PF01740 STAS domain AM481_03005 PF00916 Sulfate permease family AM481_03010 PF00582 Universal stress protein family AM481_03030 PF00665 Integrase core domain AM481_03040 PF01078 Magnesium chelatase, subunit ChlI AM481_03040 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM481_03045 PF00392 Bacterial regulatory proteins, gntR family AM481_03045 PF00155 Aminotransferase class I and II AM481_03055 PF00701 Dihydrodipicolinate synthetase family AM481_03065 PF03573 outer membrane porin, OprD family AM481_03070 PF00719 Inorganic pyrophosphatase AM481_03085 PF00501 AMP-binding enzyme AM481_03085 PF13193 AMP-binding enzyme C-terminal domain AM481_03090 PF03989 DNA gyrase C-terminal domain, beta-propeller AM481_03090 PF00521 DNA gyrase/topoisomerase IV, subunit A AM481_03095 PF07690 Major Facilitator Superfamily AM481_03100 PF03458 UPF0126 domain AM481_03105 PF02810 SEC-C motif AM481_03110 PF03741 Integral membrane protein TerC family AM481_03110 PF03471 Transporter associated domain AM481_03115 PF03641 Possible lysine decarboxylase AM481_03120 PF07690 Major Facilitator Superfamily AM481_03130 PF00817 impB/mucB/samB family AM481_03130 PF11799 impB/mucB/samB family C-terminal domain AM481_03130 PF11798 IMS family HHH motif AM481_03145 PF11842 Domain of unknown function (DUF3362) AM481_03145 PF04055 Radical SAM superfamily AM481_03145 PF08497 Radical SAM N-terminal AM481_03165 PF03358 NADPH-dependent FMN reductase AM481_03175 PF00291 Pyridoxal-phosphate dependent enzyme AM481_03210 PF00440 Bacterial regulatory proteins, tetR family AM481_03235 PF01327 Polypeptide deformylase AM481_03245 PF02481 DNA recombination-mediator protein A AM481_03245 PF17782 DprA winged helix domain AM481_03250 PF01300 Telomere recombination AM481_03255 PF00892 EamA-like transporter family AM481_03260 PF00440 Bacterial regulatory proteins, tetR family AM481_03265 PF07690 Major Facilitator Superfamily AM481_03275 PF00255 Glutathione peroxidase AM481_03285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM481_03290 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM481_03290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM481_03295 PF00231 ATP synthase AM481_03300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM481_03300 PF00306 ATP synthase alpha/beta chain, C terminal domain AM481_03300 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM481_03305 PF00213 ATP synthase delta (OSCP) subunit AM481_03310 PF00430 ATP synthase B/B' CF(0) AM481_03315 PF00137 ATP synthase subunit C AM481_03320 PF00119 ATP synthase A chain AM481_03340 PF00005 ABC transporter AM481_03345 PF00950 ABC 3 transport family AM481_03350 PF01810 LysE type translocator AM481_03355 PF04261 Dyp-type peroxidase family AM481_03365 PF03949 Malic enzyme, NAD binding domain AM481_03365 PF00390 Malic enzyme, N-terminal domain AM481_03370 PF05746 DALR anticodon binding domain AM481_03370 PF00750 tRNA synthetases class I (R) AM481_03370 PF03485 Arginyl tRNA synthetase N terminal domain AM481_03390 PF02678 Pirin AM481_03390 PF05726 Pirin C-terminal cupin domain AM481_03400 PF03551 Transcriptional regulator PadR-like family AM481_03405 PF01909 Nucleotidyltransferase domain AM481_03405 PF13427 Domain of unknown function (DUF4111) AM481_03410 PF00958 GMP synthase C terminal domain AM481_03410 PF00117 Glutamine amidotransferase class-I AM481_03410 PF02540 NAD synthase AM481_03415 PF04286 Protein of unknown function (DUF445) AM481_03420 PF07681 DoxX AM481_03425 PF09335 SNARE associated Golgi protein AM481_03440 PF13614 AAA domain AM481_03450 PF01722 BolA-like protein AM481_03465 PF01648 4'-phosphopantetheinyl transferase superfamily AM481_03470 PF12697 Alpha/beta hydrolase family AM481_03490 PF16197 Ketoacyl-synthetase C-terminal extension AM481_03490 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_03490 PF00550 Phosphopantetheine attachment site AM481_03490 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_03490 PF14765 Polyketide synthase dehydratase AM481_03490 PF08242 Methyltransferase domain AM481_03490 PF00975 Thioesterase domain AM481_03495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_03495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_03495 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_03500 PF00501 AMP-binding enzyme AM481_03505 PF03472 Autoinducer binding domain AM481_03505 PF00196 Bacterial regulatory proteins, luxR family AM481_03515 PF00765 Autoinducer synthase AM481_03520 PF00083 Sugar (and other) transporter AM481_03520 PF07690 Major Facilitator Superfamily AM481_03525 PF00378 Enoyl-CoA hydratase/isomerase AM481_03530 PF00378 Enoyl-CoA hydratase/isomerase AM481_03535 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_03535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_03535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_03540 PF00501 AMP-binding enzyme AM481_03540 PF13193 AMP-binding enzyme C-terminal domain AM481_03545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM481_03545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM481_03550 PF00171 Aldehyde dehydrogenase family AM481_03560 PF00324 Amino acid permease AM481_03565 PF00324 Amino acid permease AM481_03570 PF01042 Endoribonuclease L-PSP AM481_03575 PF01168 Alanine racemase, N-terminal domain AM481_03575 PF00842 Alanine racemase, C-terminal domain AM481_03580 PF01266 FAD dependent oxidoreductase AM481_03585 PF01037 Lrp/AsnC ligand binding domain AM481_03595 PF07715 TonB-dependent Receptor Plug Domain AM481_03595 PF00593 TonB dependent receptor AM481_03610 PF00849 RNA pseudouridylate synthase AM481_03625 PF00440 Bacterial regulatory proteins, tetR family AM481_03625 PF08361 MAATS-type transcriptional repressor, C-terminal region AM481_03675 PF00694 Aconitase C-terminal domain AM481_03675 PF00330 Aconitase family (aconitate hydratase) AM481_03680 PF00285 Citrate synthase, C-terminal domain AM481_03690 PF07729 FCD domain AM481_03690 PF00392 Bacterial regulatory proteins, gntR family AM481_03700 PF00155 Aminotransferase class I and II AM481_03705 PF09330 D-lactate dehydrogenase, membrane binding AM481_03705 PF01565 FAD binding domain AM481_03710 PF01070 FMN-dependent dehydrogenase AM481_03715 PF07729 FCD domain AM481_03715 PF00392 Bacterial regulatory proteins, gntR family AM481_03720 PF02652 L-lactate permease AM481_03725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM481_03725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM481_03725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM481_03725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM481_03730 PF16363 GDP-mannose 4,6 dehydratase AM481_03735 PF00342 Phosphoglucose isomerase AM481_03740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM481_03740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM481_03740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM481_03745 PF00483 Nucleotidyl transferase AM481_03750 PF02397 Bacterial sugar transferase AM481_03755 PF00535 Glycosyl transferase family 2 AM481_03785 PF08666 SAF domain AM481_03785 PF03102 NeuB family AM481_03800 PF02348 Cytidylyltransferase AM481_03805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM481_03810 PF02719 Polysaccharide biosynthesis protein AM481_03815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM481_03815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM481_03815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM481_03820 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM481_03820 PF02563 Polysaccharide biosynthesis/export protein AM481_03820 PF10531 SLBB domain AM481_03825 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM481_03830 PF02706 Chain length determinant protein AM481_03830 PF13807 G-rich domain on putative tyrosine kinase AM481_03830 PF13614 AAA domain AM481_03835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM481_03835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_03840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_03840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM481_03845 PF03023 Lipid II flippase MurJ AM481_03850 PF01510 N-acetylmuramoyl-L-alanine amidase AM481_03855 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM481_03855 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM481_03875 PF03725 3' exoribonuclease family, domain 2 AM481_03875 PF01138 3' exoribonuclease family, domain 1 AM481_03880 PF00487 Fatty acid desaturase AM481_03885 PF00175 Oxidoreductase NAD-binding domain AM481_03890 PF00440 Bacterial regulatory proteins, tetR family AM481_03895 PF00440 Bacterial regulatory proteins, tetR family AM481_03895 PF08360 QacR-like protein, C-terminal region AM481_03900 PF01323 DSBA-like thioredoxin domain AM481_03910 PF13419 Haloacid dehalogenase-like hydrolase AM481_03915 PF00106 short chain dehydrogenase AM481_03930 PF00583 Acetyltransferase (GNAT) family AM481_03930 PF00696 Amino acid kinase family AM481_03935 PF09084 NMT1/THI5 like AM481_03940 PF09084 NMT1/THI5 like AM481_03945 PF00296 Luciferase-like monooxygenase AM481_03950 PF00528 Binding-protein-dependent transport system inner membrane component AM481_03955 PF00005 ABC transporter AM481_03960 PF08362 YcdC-like protein, C-terminal region AM481_03960 PF00440 Bacterial regulatory proteins, tetR family AM481_03965 PF01048 Phosphorylase superfamily AM481_03975 PF06574 FAD synthetase AM481_03975 PF01687 Riboflavin kinase AM481_03980 PF00133 tRNA synthetases class I (I, L, M and V) AM481_03980 PF06827 Zinc finger found in FPG and IleRS AM481_03980 PF08264 Anticodon-binding domain of tRNA AM481_03985 PF01252 Signal peptidase (SPase) II AM481_03990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_04030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM481_04035 PF07859 alpha/beta hydrolase fold AM481_04060 PF01025 GrpE AM481_04065 PF00012 Hsp70 protein AM481_04085 PF13406 Transglycosylase SLT domain AM481_04090 PF02222 ATP-grasp domain AM481_04090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM481_04095 PF00731 AIR carboxylase AM481_04110 PF08245 Mur ligase middle domain AM481_04110 PF02875 Mur ligase family, glutamate ligase domain AM481_04110 PF01225 Mur ligase family, catalytic domain AM481_04120 PF01569 PAP2 superfamily AM481_04125 PF03741 Integral membrane protein TerC family AM481_04135 PF03738 Glutathionylspermidine synthase preATP-grasp AM481_04140 PF00355 Rieske [2Fe-2S] domain AM481_04145 PF01979 Amidohydrolase family AM481_04150 PF00156 Phosphoribosyl transferase domain AM481_04160 PF10411 Disulfide bond isomerase protein N-terminus AM481_04160 PF13098 Thioredoxin-like domain AM481_04165 PF16916 Dimerisation domain of Zinc Transporter AM481_04165 PF01545 Cation efflux family AM481_04170 PF02583 Metal-sensitive transcriptional repressor AM481_04175 PF12631 MnmE helical domain AM481_04175 PF01926 50S ribosome-binding GTPase AM481_04175 PF10396 GTP-binding protein TrmE N-terminus AM481_04180 PF02096 60Kd inner membrane protein AM481_04180 PF14849 YidC periplasmic domain AM481_04185 PF01809 Putative membrane protein insertion efficiency factor AM481_04190 PF00825 Ribonuclease P AM481_04195 PF00468 Ribosomal protein L34 AM481_04200 PF11638 DnaA N-terminal domain AM481_04200 PF00308 Bacterial dnaA protein AM481_04200 PF08299 Bacterial dnaA protein helix-turn-helix AM481_04205 PF00712 DNA polymerase III beta subunit, N-terminal domain AM481_04205 PF02768 DNA polymerase III beta subunit, C-terminal domain AM481_04205 PF02767 DNA polymerase III beta subunit, central domain AM481_04210 PF02463 RecF/RecN/SMC N terminal domain AM481_04215 PF00204 DNA gyrase B AM481_04215 PF00986 DNA gyrase B subunit, carboxyl terminus AM481_04215 PF18053 DNA gyrase B subunit insert domain AM481_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_04215 PF01751 Toprim domain AM481_04225 PF09335 SNARE associated Golgi protein AM481_04230 PF12848 ABC transporter AM481_04230 PF00005 ABC transporter AM481_04250 PF01521 Iron-sulphur cluster biosynthesis AM481_04255 PF00561 alpha/beta hydrolase fold AM481_04260 PF03702 Anhydro-N-acetylmuramic acid kinase AM481_04265 PF00579 tRNA synthetases class I (W and Y) AM481_04310 PF00209 Sodium:neurotransmitter symporter family AM481_04320 PF01029 NusB family AM481_04320 PF01189 16S rRNA methyltransferase RsmB/F AM481_04325 PF00551 Formyl transferase AM481_04325 PF02911 Formyl transferase, C-terminal domain AM481_04330 PF00920 Dehydratase family AM481_04345 PF03466 LysR substrate binding domain AM481_04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_04350 PF00860 Permease family AM481_04355 PF00311 Phosphoenolpyruvate carboxylase AM481_04360 PF08361 MAATS-type transcriptional repressor, C-terminal region AM481_04360 PF00440 Bacterial regulatory proteins, tetR family AM481_04365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_04370 PF00873 AcrB/AcrD/AcrF family AM481_04380 PF00684 DnaJ central domain AM481_04380 PF01556 DnaJ C terminal domain AM481_04380 PF00226 DnaJ domain AM481_04390 PF01113 Dihydrodipicolinate reductase, N-terminus AM481_04390 PF05173 Dihydrodipicolinate reductase, C-terminus AM481_04400 PF07690 Major Facilitator Superfamily AM481_04405 PF00248 Aldo/keto reductase family AM481_04410 PF03466 LysR substrate binding domain AM481_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_04425 PF00155 Aminotransferase class I and II AM481_04425 PF00392 Bacterial regulatory proteins, gntR family AM481_04430 PF00107 Zinc-binding dehydrogenase AM481_04430 PF08240 Alcohol dehydrogenase GroES-like domain AM481_04435 PF03352 Methyladenine glycosylase AM481_04450 PF14815 NUDIX domain AM481_04450 PF00730 HhH-GPD superfamily base excision DNA repair protein AM481_04450 PF00633 Helix-hairpin-helix motif AM481_04450 PF10576 Iron-sulfur binding domain of endonuclease III AM481_04465 PF07043 Protein of unknown function (DUF1328) AM481_04470 PF03692 Putative zinc- or iron-chelating domain AM481_04475 PF07995 Glucose / Sorbosone dehydrogenase AM481_04480 PF12002 MgsA AAA+ ATPase C terminal AM481_04480 PF16193 AAA C-terminal domain AM481_04480 PF00004 ATPase family associated with various cellular activities (AAA) AM481_04485 PF01226 Formate/nitrite transporter AM481_04495 PF01259 SAICAR synthetase AM481_04505 PF00701 Dihydrodipicolinate synthetase family AM481_04510 PF00857 Isochorismatase family AM481_04515 PF01758 Sodium Bile acid symporter family AM481_04520 PF01554 MatE AM481_04525 PF04463 Protein of unknown function (DUF523) AM481_04530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM481_04540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM481_04545 PF02798 Glutathione S-transferase, N-terminal domain AM481_04545 PF14497 Glutathione S-transferase, C-terminal domain AM481_04555 PF00324 Amino acid permease AM481_04565 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM481_04565 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM481_04575 PF07702 UTRA domain AM481_04575 PF00392 Bacterial regulatory proteins, gntR family AM481_04580 PF05962 HutD AM481_04585 PF17391 Urocanase N-terminal domain AM481_04585 PF17392 Urocanase C-terminal domain AM481_04585 PF01175 Urocanase Rossmann-like domain AM481_04590 PF00221 Aromatic amino acid lyase AM481_04595 PF00324 Amino acid permease AM481_04600 PF01979 Amidohydrolase family AM481_04605 PF00491 Arginase family AM481_04620 PF01177 Asp/Glu/Hydantoin racemase AM481_04625 PF01380 SIS domain AM481_04630 PF12804 MobA-like NTP transferase domain AM481_04630 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_04630 PF14602 Hexapeptide repeat of succinyl-transferase AM481_04635 PF04608 Phosphatidylglycerophosphatase A AM481_04640 PF00586 AIR synthase related protein, N-terminal domain AM481_04640 PF02769 AIR synthase related protein, C-terminal domain AM481_04645 PF01029 NusB family AM481_04650 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM481_04655 PF00925 GTP cyclohydrolase II AM481_04655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM481_04685 PF02580 D-Tyr-tRNA(Tyr) deacylase AM481_04690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM481_04690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM481_04695 PF00581 Rhodanese-like domain AM481_04700 PF02666 Phosphatidylserine decarboxylase AM481_04705 PF03069 Acetamidase/Formamidase family AM481_04725 PF11808 Phosphate regulon sensor protein PhoR AM481_04725 PF00989 PAS fold AM481_04725 PF00512 His Kinase A (phospho-acceptor) domain AM481_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_04730 PF00486 Transcriptional regulatory protein, C terminal AM481_04730 PF00072 Response regulator receiver domain AM481_04740 PF00106 short chain dehydrogenase AM481_04745 PF01554 MatE AM481_04750 PF00155 Aminotransferase class I and II AM481_04755 PF04286 Protein of unknown function (DUF445) AM481_04770 PF04262 Glutamate-cysteine ligase AM481_04775 PF02600 Disulfide bond formation protein DsbB AM481_04780 PF04717 Type VI secretion system, phage-baseplate injector AM481_04785 PF01476 LysM domain AM481_04785 PF00877 NlpC/P60 family AM481_04805 PF05728 Uncharacterised protein family (UPF0227) AM481_04810 PF00204 DNA gyrase B AM481_04810 PF00986 DNA gyrase B subunit, carboxyl terminus AM481_04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_04810 PF01751 Toprim domain AM481_04815 PF00106 short chain dehydrogenase AM481_04820 PF04115 Ureidoglycolate lyase AM481_04825 PF03561 Allantoicase repeat AM481_04830 PF01494 FAD binding domain AM481_04840 PF00860 Permease family AM481_04845 PF00576 HIUase/Transthyretin family AM481_04875 PF11412 Disulphide bond corrector protein DsbC AM481_04875 PF02683 Cytochrome C biogenesis protein transmembrane region AM481_04880 PF00990 Diguanylate cyclase, GGDEF domain AM481_04880 PF07694 5TMR of 5TMR-LYT AM481_04885 PF07859 alpha/beta hydrolase fold AM481_04895 PF03960 ArsC family AM481_04900 PF03372 Endonuclease/Exonuclease/phosphatase family AM481_04905 PF00156 Phosphoribosyl transferase domain AM481_04910 PF07715 TonB-dependent Receptor Plug Domain AM481_04910 PF00593 TonB dependent receptor AM481_04920 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM481_04920 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM481_04935 PF04101 Glycosyltransferase family 28 C-terminal domain AM481_04935 PF03033 Glycosyltransferase family 28 N-terminal domain AM481_04940 PF01225 Mur ligase family, catalytic domain AM481_04940 PF02875 Mur ligase family, glutamate ligase domain AM481_04940 PF08245 Mur ligase middle domain AM481_04945 PF07478 D-ala D-ala ligase C-terminus AM481_04945 PF01820 D-ala D-ala ligase N-terminus AM481_04950 PF03799 Cell division protein FtsQ AM481_04950 PF08478 POTRA domain, FtsQ-type AM481_04955 PF02491 SHS2 domain inserted in FTSA AM481_04960 PF00091 Tubulin/FtsZ family, GTPase domain AM481_04960 PF12327 FtsZ family, C-terminal domain AM481_04965 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM481_04975 PF01551 Peptidase family M23 AM481_04980 PF00456 Transketolase, thiamine diphosphate binding domain AM481_04980 PF17831 Pyruvate dehydrogenase E1 component middle domain AM481_04985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM481_04985 PF00364 Biotin-requiring enzyme AM481_04985 PF02817 e3 binding domain AM481_04995 PF01169 Uncharacterized protein family UPF0016 AM481_05015 PF01613 Flavin reductase like domain AM481_05015 PF00258 Flavodoxin AM481_05020 PF03692 Putative zinc- or iron-chelating domain AM481_05025 PF00571 CBS domain AM481_05025 PF00478 IMP dehydrogenase / GMP reductase domain AM481_05030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM481_05030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM481_05030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM481_05030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM481_05035 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM481_05035 PF01243 Pyridoxamine 5'-phosphate oxidase AM481_05040 PF17768 RecJ OB domain AM481_05040 PF02272 DHHA1 domain AM481_05040 PF01368 DHH family AM481_05060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_05065 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM481_05070 PF04452 RNA methyltransferase AM481_05075 PF00924 Mechanosensitive ion channel AM481_05085 PF13193 AMP-binding enzyme C-terminal domain AM481_05085 PF00501 AMP-binding enzyme AM481_05085 PF16177 Acetyl-coenzyme A synthetase N-terminus AM481_05090 PF00857 Isochorismatase family AM481_05095 PF01037 Lrp/AsnC ligand binding domain AM481_05100 PF00872 Transposase, Mutator family AM481_05105 PF00296 Luciferase-like monooxygenase AM481_05110 PF03358 NADPH-dependent FMN reductase AM481_05115 PF00196 Bacterial regulatory proteins, luxR family AM481_05115 PF00072 Response regulator receiver domain AM481_05125 PF00512 His Kinase A (phospho-acceptor) domain AM481_05125 PF00072 Response regulator receiver domain AM481_05125 PF01627 Hpt domain AM481_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_05125 PF00672 HAMP domain AM481_05130 PF04341 Protein of unknown function, DUF485 AM481_05135 PF00474 Sodium:solute symporter family AM481_05145 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_05155 PF00990 Diguanylate cyclase, GGDEF domain AM481_05155 PF17158 Membrane-associated sensor, integral membrane domain AM481_05165 PF17760 UvrA interaction domain AM481_05165 PF17755 UvrA DNA-binding domain AM481_05165 PF00005 ABC transporter AM481_05170 PF00440 Bacterial regulatory proteins, tetR family AM481_05170 PF16925 Tetracyclin repressor-like, C-terminal domain AM481_05175 PF08240 Alcohol dehydrogenase GroES-like domain AM481_05175 PF00107 Zinc-binding dehydrogenase AM481_05185 PF06942 GlpM protein AM481_05190 PF03070 TENA/THI-4/PQQC family AM481_05190 PF08543 Phosphomethylpyrimidine kinase AM481_05190 PF02581 Thiamine monophosphate synthase AM481_05200 PF07690 Major Facilitator Superfamily AM481_05205 PF00436 Single-strand binding protein family AM481_05215 PF03591 AzlC protein AM481_05225 PF00324 Amino acid permease AM481_05230 PF00392 Bacterial regulatory proteins, gntR family AM481_05230 PF00155 Aminotransferase class I and II AM481_05235 PF00202 Aminotransferase class-III AM481_05240 PF00171 Aldehyde dehydrogenase family AM481_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_05250 PF00857 Isochorismatase family AM481_05255 PF02678 Pirin AM481_05255 PF05726 Pirin C-terminal cupin domain AM481_05260 PF01593 Flavin containing amine oxidoreductase AM481_05280 PF07690 Major Facilitator Superfamily AM481_05285 PF03466 LysR substrate binding domain AM481_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_05305 PF00248 Aldo/keto reductase family AM481_05310 PF12833 Helix-turn-helix domain AM481_05310 PF02311 AraC-like ligand binding domain AM481_05340 PF01638 HxlR-like helix-turn-helix AM481_05350 PF02525 Flavodoxin-like fold AM481_05370 PF02705 K+ potassium transporter AM481_05395 PF00230 Major intrinsic protein AM481_05410 PF00977 Histidine biosynthesis protein AM481_05415 PF01636 Phosphotransferase enzyme family AM481_05430 PF03992 Antibiotic biosynthesis monooxygenase AM481_05445 PF00977 Histidine biosynthesis protein AM481_05460 PF00117 Glutamine amidotransferase class-I AM481_05465 PF00475 Imidazoleglycerol-phosphate dehydratase AM481_05485 PF00583 Acetyltransferase (GNAT) family AM481_05490 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM481_05490 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM481_05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_05500 PF00672 HAMP domain AM481_05500 PF00512 His Kinase A (phospho-acceptor) domain AM481_05505 PF00486 Transcriptional regulatory protein, C terminal AM481_05505 PF00072 Response regulator receiver domain AM481_05510 PF17674 HHH domain AM481_05510 PF09371 Tex-like protein N-terminal domain AM481_05510 PF16921 Tex protein YqgF-like domain AM481_05510 PF00575 S1 RNA binding domain AM481_05515 PF01740 STAS domain AM481_05515 PF00916 Sulfate permease family AM481_05520 PF00106 short chain dehydrogenase AM481_05525 PF01053 Cys/Met metabolism PLP-dependent enzyme AM481_05530 PF00005 ABC transporter AM481_05530 PF12848 ABC transporter AM481_05555 PF04191 Phospholipid methyltransferase AM481_05575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_05575 PF00529 HlyD membrane-fusion protein of T1SS AM481_05580 PF00873 AcrB/AcrD/AcrF family AM481_05585 PF01545 Cation efflux family AM481_05615 PF00324 Amino acid permease AM481_05630 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM481_05645 PF01795 MraW methylase family AM481_05655 PF00905 Penicillin binding protein transpeptidase domain AM481_05655 PF03717 Penicillin-binding Protein dimerisation domain AM481_05660 PF08245 Mur ligase middle domain AM481_05660 PF02875 Mur ligase family, glutamate ligase domain AM481_05660 PF01225 Mur ligase family, catalytic domain AM481_05665 PF02875 Mur ligase family, glutamate ligase domain AM481_05665 PF01225 Mur ligase family, catalytic domain AM481_05665 PF08245 Mur ligase middle domain AM481_05670 PF00953 Glycosyl transferase family 4 AM481_05680 PF13847 Methyltransferase domain AM481_05685 PF00912 Transglycosylase AM481_05685 PF00905 Penicillin binding protein transpeptidase domain AM481_05685 PF17092 Penicillin-binding protein OB-like domain AM481_05710 PF03958 Bacterial type II/III secretion system short domain AM481_05710 PF07660 Secretin and TonB N terminus short domain AM481_05710 PF11741 AMIN domain AM481_05710 PF00263 Bacterial type II and III secretion system protein AM481_05715 PF01202 Shikimate kinase AM481_05720 PF01761 3-dehydroquinate synthase AM481_05730 PF00310 Glutamine amidotransferases class-II AM481_05730 PF04898 Glutamate synthase central domain AM481_05730 PF01645 Conserved region in glutamate synthase AM481_05730 PF01493 GXGXG motif AM481_05735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM481_05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_05745 PF04011 LemA family AM481_05750 PF04536 TPM domain AM481_05760 PF07963 Prokaryotic N-terminal methylation motif AM481_05760 PF00114 Pilin (bacterial filament) AM481_05770 PF11846 Virulence factor membrane-bound polymerase, C-terminal AM481_05770 PF04932 O-Antigen ligase AM481_05770 PF15864 Protein glycosylation ligase AM481_05775 PF00210 Ferritin-like domain AM481_05780 PF04324 BFD-like [2Fe-2S] binding domain AM481_05785 PF01042 Endoribonuclease L-PSP AM481_05790 PF13291 ACT domain AM481_05790 PF02824 TGS domain AM481_05790 PF04607 Region found in RelA / SpoT proteins AM481_05800 PF01192 RNA polymerase Rpb6 AM481_05805 PF00625 Guanylate kinase AM481_05810 PF02401 LytB protein AM481_05850 PF00886 Ribosomal protein S16 AM481_05855 PF01782 RimM N-terminal domain AM481_05855 PF05239 PRC-barrel domain AM481_05860 PF01746 tRNA (Guanine-1)-methyltransferase AM481_05865 PF01245 Ribosomal protein L19 AM481_05870 PF00561 alpha/beta hydrolase fold AM481_05875 PF03280 Proteobacterial lipase chaperone protein AM481_05880 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM481_05880 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM481_05880 PF09157 Pseudouridine synthase II TruB, C-terminal AM481_05885 PF01925 Sulfite exporter TauE/SafE AM481_05895 PF00892 EamA-like transporter family AM481_05900 PF00892 EamA-like transporter family AM481_05905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM481_05905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM481_05910 PF01565 FAD binding domain AM481_05910 PF02913 FAD linked oxidases, C-terminal domain AM481_05920 PF03992 Antibiotic biosynthesis monooxygenase AM481_05925 PF02525 Flavodoxin-like fold AM481_05935 PF07690 Major Facilitator Superfamily AM481_05940 PF12805 FUSC-like inner membrane protein yccS AM481_05945 PF00080 Copper/zinc superoxide dismutase (SODC) AM481_05950 PF01594 AI-2E family transporter AM481_05955 PF13614 AAA domain AM481_05985 PF00324 Amino acid permease AM481_05990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM481_05990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM481_05995 PF00202 Aminotransferase class-III AM481_06000 PF04958 Arginine N-succinyltransferase beta subunit AM481_06005 PF00171 Aldehyde dehydrogenase family AM481_06010 PF04996 Succinylarginine dihydrolase AM481_06015 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM481_06045 PF03466 LysR substrate binding domain AM481_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_06050 PF00892 EamA-like transporter family AM481_06060 PF05746 DALR anticodon binding domain AM481_06060 PF02092 Glycyl-tRNA synthetase beta subunit AM481_06065 PF02091 Glycyl-tRNA synthetase alpha subunit AM481_06090 PF00571 CBS domain AM481_06095 PF04024 PspC domain AM481_06105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_06105 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM481_06105 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_06105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_06115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM481_06115 PF01488 Shikimate / quinate 5-dehydrogenase AM481_06115 PF08501 Shikimate dehydrogenase substrate binding domain AM481_06120 PF01218 Coproporphyrinogen III oxidase AM481_06125 PF00925 GTP cyclohydrolase II AM481_06130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM481_06130 PF02780 Transketolase, C-terminal domain AM481_06130 PF02779 Transketolase, pyrimidine binding domain AM481_06135 PF00459 Inositol monophosphatase family AM481_06140 PF12343 Cold shock protein DEAD box A AM481_06140 PF00270 DEAD/DEAH box helicase AM481_06140 PF00271 Helicase conserved C-terminal domain AM481_06140 PF03880 DbpA RNA binding domain AM481_06145 PF00005 ABC transporter AM481_06150 PF02405 Permease MlaE AM481_06160 PF05494 MlaC protein AM481_06170 PF01544 CorA-like Mg2+ transporter protein AM481_06175 PF03641 Possible lysine decarboxylase AM481_06180 PF00293 NUDIX domain AM481_06185 PF00156 Phosphoribosyl transferase domain AM481_06190 PF17191 RecG wedge domain AM481_06190 PF00270 DEAD/DEAH box helicase AM481_06190 PF00271 Helicase conserved C-terminal domain AM481_06205 PF01553 Acyltransferase AM481_06215 PF00375 Sodium:dicarboxylate symporter family AM481_06225 PF01926 50S ribosome-binding GTPase AM481_06230 PF02082 Transcriptional regulator AM481_06235 PF00042 Globin AM481_06235 PF00175 Oxidoreductase NAD-binding domain AM481_06235 PF00970 Oxidoreductase FAD-binding domain AM481_06240 PF05872 Bacterial protein of unknown function (DUF853) AM481_06245 PF01053 Cys/Met metabolism PLP-dependent enzyme AM481_06250 PF00117 Glutamine amidotransferase class-I AM481_06255 PF00338 Ribosomal protein S10p/S20e AM481_06260 PF00297 Ribosomal protein L3 AM481_06265 PF00573 Ribosomal protein L4/L1 family AM481_06270 PF00276 Ribosomal protein L23 AM481_06275 PF03947 Ribosomal Proteins L2, C-terminal domain AM481_06275 PF00181 Ribosomal Proteins L2, RNA binding domain AM481_06280 PF00203 Ribosomal protein S19 AM481_06285 PF00237 Ribosomal protein L22p/L17e AM481_06290 PF00189 Ribosomal protein S3, C-terminal domain AM481_06290 PF07650 KH domain AM481_06295 PF00252 Ribosomal protein L16p/L10e AM481_06300 PF00831 Ribosomal L29 protein AM481_06305 PF00366 Ribosomal protein S17 AM481_06310 PF00238 Ribosomal protein L14p/L23e AM481_06315 PF00467 KOW motif AM481_06315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM481_06320 PF00281 Ribosomal protein L5 AM481_06320 PF00673 ribosomal L5P family C-terminus AM481_06325 PF00253 Ribosomal protein S14p/S29e AM481_06330 PF00410 Ribosomal protein S8 AM481_06335 PF00347 Ribosomal protein L6 AM481_06340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM481_06345 PF03719 Ribosomal protein S5, C-terminal domain AM481_06345 PF00333 Ribosomal protein S5, N-terminal domain AM481_06350 PF00327 Ribosomal protein L30p/L7e AM481_06355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM481_06360 PF00344 SecY translocase AM481_06365 PF00444 Ribosomal protein L36 AM481_06370 PF00416 Ribosomal protein S13/S18 AM481_06375 PF00411 Ribosomal protein S11 AM481_06380 PF01479 S4 domain AM481_06380 PF00163 Ribosomal protein S4/S9 N-terminal domain AM481_06385 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM481_06385 PF01000 RNA polymerase Rpb3/RpoA insert domain AM481_06385 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM481_06390 PF01196 Ribosomal protein L17 AM481_06395 PF00743 Flavin-binding monooxygenase-like AM481_06400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_06400 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_06400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_06405 PF03937 Flavinator of succinate dehydrogenase AM481_06435 PF09526 Probable metal-binding protein (DUF2387) AM481_06440 PF01432 Peptidase family M3 AM481_06445 PF08206 Ribonuclease B OB domain AM481_06445 PF00773 RNB domain AM481_06445 PF08461 Ribonuclease R winged-helix domain AM481_06445 PF17876 Cold shock domain AM481_06445 PF00575 S1 RNA binding domain AM481_06495 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM481_06500 PF12833 Helix-turn-helix domain AM481_06505 PF00892 EamA-like transporter family AM481_06510 PF03631 Virulence factor BrkB AM481_06515 PF03358 NADPH-dependent FMN reductase AM481_06540 PF02130 Uncharacterized protein family UPF0054 AM481_06545 PF02562 PhoH-like protein AM481_06550 PF04055 Radical SAM superfamily AM481_06550 PF01938 TRAM domain AM481_06550 PF00919 Uncharacterized protein family UPF0004 AM481_06555 PF01551 Peptidase family M23 AM481_06555 PF10145 Phage-related minor tail protein AM481_06555 PF01464 Transglycosylase SLT domain AM481_06565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM481_06565 PF00056 lactate/malate dehydrogenase, NAD binding domain AM481_06585 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM481_06590 PF01066 CDP-alcohol phosphatidyltransferase AM481_06635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_06635 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_06635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_06640 PF00440 Bacterial regulatory proteins, tetR family AM481_06640 PF17932 Tetracyclin repressor-like, C-terminal domain AM481_06655 PF01039 Carboxyl transferase domain AM481_06660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_06660 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_06660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_06670 PF02785 Biotin carboxylase C-terminal domain AM481_06670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM481_06670 PF00364 Biotin-requiring enzyme AM481_06670 PF00289 Biotin carboxylase, N-terminal domain AM481_06680 PF04386 Stringent starvation protein B AM481_06685 PF13417 Glutathione S-transferase, N-terminal domain AM481_06685 PF00043 Glutathione S-transferase, C-terminal domain AM481_06690 PF00380 Ribosomal protein S9/S16 AM481_06695 PF00572 Ribosomal protein L13 AM481_06700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM481_06705 PF00398 Ribosomal RNA adenine dimethylase AM481_06710 PF00149 Calcineurin-like phosphoesterase AM481_06730 PF13167 GTP-binding GTPase N-terminal AM481_06730 PF16360 GTP-binding GTPase Middle Region AM481_06730 PF01926 50S ribosome-binding GTPase AM481_06740 PF13091 PLD-like domain AM481_06745 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM481_06745 PF00149 Calcineurin-like phosphoesterase AM481_06750 PF00691 OmpA family AM481_06750 PF01389 OmpA-like transmembrane domain AM481_06755 PF00990 Diguanylate cyclase, GGDEF domain AM481_06755 PF17152 Periplasmic sensor domain AM481_06790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_06790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM481_06800 PF04273 Putative phosphatase (DUF442) AM481_06800 PF00753 Metallo-beta-lactamase superfamily AM481_06805 PF00561 alpha/beta hydrolase fold AM481_06810 PF00085 Thioredoxin AM481_06815 PF03061 Thioesterase superfamily AM481_06825 PF04461 Protein of unknown function (DUF520) AM481_06835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM481_06835 PF01266 FAD dependent oxidoreductase AM481_06845 PF03795 YCII-related domain AM481_06850 PF04279 Intracellular septation protein A AM481_06855 PF02811 PHP domain AM481_06860 PF01062 Bestrophin, RFP-TM, chloride channel AM481_06865 PF04002 RadC-like JAB domain AM481_06870 PF02441 Flavoprotein AM481_06870 PF04127 DNA / pantothenate metabolism flavoprotein AM481_06875 PF07549 SecD/SecF GG Motif AM481_06875 PF02355 Protein export membrane protein AM481_06880 PF02355 Protein export membrane protein AM481_06880 PF13721 SecD export protein N-terminal TM region AM481_06880 PF07549 SecD/SecF GG Motif AM481_06885 PF02699 Preprotein translocase subunit AM481_06890 PF01702 Queuine tRNA-ribosyltransferase AM481_06905 PF02547 Queuosine biosynthesis protein AM481_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_06935 PF07689 KaiB domain AM481_06935 PF00512 His Kinase A (phospho-acceptor) domain AM481_06940 PF03710 Glutamate-ammonia ligase adenylyltransferase AM481_06940 PF08335 GlnD PII-uridylyltransferase AM481_06945 PF01063 Amino-transferase class IV AM481_06960 PF01522 Polysaccharide deacetylase AM481_06965 PF00535 Glycosyl transferase family 2 AM481_06970 PF00534 Glycosyl transferases group 1 AM481_06970 PF13439 Glycosyltransferase Family 4 AM481_06995 PF11380 Stealth protein CR2, conserved region 2 AM481_06995 PF17101 Stealth protein CR1, conserved region 1 AM481_06995 PF17102 Stealth protein CR3, conserved region 3 AM481_07000 PF01336 OB-fold nucleic acid binding domain AM481_07000 PF00152 tRNA synthetases class II (D, K and N) AM481_07000 PF02938 GAD domain AM481_07010 PF00593 TonB dependent receptor AM481_07010 PF07715 TonB-dependent Receptor Plug Domain AM481_07030 PF06146 Phosphate-starvation-inducible E AM481_07035 PF02798 Glutathione S-transferase, N-terminal domain AM481_07035 PF00043 Glutathione S-transferase, C-terminal domain AM481_07040 PF03466 LysR substrate binding domain AM481_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_07045 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM481_07045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_07045 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_07045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_07050 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_07050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_07050 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM481_07050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_07060 PF00672 HAMP domain AM481_07060 PF00512 His Kinase A (phospho-acceptor) domain AM481_07065 PF00072 Response regulator receiver domain AM481_07065 PF00486 Transcriptional regulatory protein, C terminal AM481_07070 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM481_07090 PF01923 Cobalamin adenosyltransferase AM481_07095 PF07715 TonB-dependent Receptor Plug Domain AM481_07095 PF00593 TonB dependent receptor AM481_07100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM481_07105 PF00291 Pyridoxal-phosphate dependent enzyme AM481_07130 PF00290 Tryptophan synthase alpha chain AM481_07135 PF01039 Carboxyl transferase domain AM481_07140 PF02875 Mur ligase family, glutamate ligase domain AM481_07140 PF08245 Mur ligase middle domain AM481_07155 PF00753 Metallo-beta-lactamase superfamily AM481_07160 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM481_07160 PF00578 AhpC/TSA family AM481_07165 PF01043 SecA preprotein cross-linking domain AM481_07165 PF02810 SEC-C motif AM481_07165 PF07516 SecA Wing and Scaffold domain AM481_07165 PF07517 SecA DEAD-like domain AM481_07175 PF07690 Major Facilitator Superfamily AM481_07175 PF00083 Sugar (and other) transporter AM481_07180 PF03006 Haemolysin-III related AM481_07205 PF00378 Enoyl-CoA hydratase/isomerase AM481_07205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM481_07205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM481_07210 PF02803 Thiolase, C-terminal domain AM481_07210 PF00108 Thiolase, N-terminal domain AM481_07215 PF02311 AraC-like ligand binding domain AM481_07215 PF12833 Helix-turn-helix domain AM481_07220 PF02515 CoA-transferase family III AM481_07225 PF04966 Carbohydrate-selective porin, OprB family AM481_07230 PF01011 PQQ enzyme repeat AM481_07235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM481_07235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM481_07245 PF00893 Small Multidrug Resistance protein AM481_07255 PF02803 Thiolase, C-terminal domain AM481_07255 PF00108 Thiolase, N-terminal domain AM481_07265 PF00691 OmpA family AM481_07265 PF13505 Outer membrane protein beta-barrel domain AM481_07275 PF01139 tRNA-splicing ligase RtcB AM481_07280 PF00324 Amino acid permease AM481_07285 PF05175 Methyltransferase small domain AM481_07285 PF08468 Methyltransferase small domain N-terminal AM481_07290 PF00860 Permease family AM481_07300 PF01741 Large-conductance mechanosensitive channel, MscL AM481_07315 PF06827 Zinc finger found in FPG and IleRS AM481_07315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM481_07315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM481_07320 PF02245 Methylpurine-DNA glycosylase (MPG) AM481_07325 PF00593 TonB dependent receptor AM481_07325 PF07715 TonB-dependent Receptor Plug Domain AM481_07340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_07355 PF10411 Disulfide bond isomerase protein N-terminus AM481_07355 PF13098 Thioredoxin-like domain AM481_07360 PF01571 Aminomethyltransferase folate-binding domain AM481_07370 PF04343 Protein of unknown function, DUF488 AM481_07375 PF03831 PhnA domain AM481_07375 PF08274 PhnA Zinc-Ribbon AM481_07380 PF07411 Domain of unknown function (DUF1508) AM481_07385 PF04073 Aminoacyl-tRNA editing domain AM481_07385 PF03129 Anticodon binding domain AM481_07385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM481_07390 PF00873 AcrB/AcrD/AcrF family AM481_07405 PF00072 Response regulator receiver domain AM481_07410 PF00072 Response regulator receiver domain AM481_07415 PF01584 CheW-like domain AM481_07420 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM481_07420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM481_07425 PF01627 Hpt domain AM481_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_07425 PF01584 CheW-like domain AM481_07425 PF00072 Response regulator receiver domain AM481_07435 PF01546 Peptidase family M20/M25/M40 AM481_07435 PF07687 Peptidase dimerisation domain AM481_07440 PF08085 Entericidin EcnA/B family AM481_07450 PF04304 Protein of unknown function (DUF454) AM481_07455 PF03734 L,D-transpeptidase catalytic domain AM481_07455 PF17969 L,D-transpeptidase C-terminal domain AM481_07495 PF00175 Oxidoreductase NAD-binding domain AM481_07495 PF00667 FAD binding domain AM481_07495 PF00258 Flavodoxin AM481_07505 PF12805 FUSC-like inner membrane protein yccS AM481_07510 PF07690 Major Facilitator Superfamily AM481_07515 PF00881 Nitroreductase family AM481_07530 PF01235 Sodium:alanine symporter family AM481_07535 PF01734 Patatin-like phospholipase AM481_07540 PF00291 Pyridoxal-phosphate dependent enzyme AM481_07540 PF13291 ACT domain AM481_07545 PF05992 SbmA/BacA-like family AM481_07575 PF02637 GatB domain AM481_07575 PF02934 GatB/GatE catalytic domain AM481_07580 PF01425 Amidase AM481_07585 PF02686 Glu-tRNAGln amidotransferase C subunit AM481_07595 PF04085 rod shape-determining protein MreC AM481_07600 PF04093 rod shape-determining protein MreD AM481_07605 PF02545 Maf-like protein AM481_07610 PF10150 Ribonuclease E/G family AM481_07610 PF00575 S1 RNA binding domain AM481_07620 PF06974 Protein of unknown function (DUF1298) AM481_07620 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AM481_07625 PF01507 Phosphoadenosine phosphosulfate reductase family AM481_07640 PF02525 Flavodoxin-like fold AM481_07660 PF02673 Bacitracin resistance protein BacA AM481_07665 PF06719 AraC-type transcriptional regulator N-terminus AM481_07665 PF12833 Helix-turn-helix domain AM481_07670 PF16197 Ketoacyl-synthetase C-terminal extension AM481_07670 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_07670 PF14765 Polyketide synthase dehydratase AM481_07670 PF09277 Erythronolide synthase, docking AM481_07670 PF08990 Erythronolide synthase docking AM481_07670 PF08240 Alcohol dehydrogenase GroES-like domain AM481_07670 PF08659 KR domain AM481_07670 PF00550 Phosphopantetheine attachment site AM481_07670 PF00698 Acyl transferase domain AM481_07670 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_07675 PF01965 DJ-1/PfpI family AM481_07685 PF00324 Amino acid permease AM481_07690 PF04303 PrpF protein AM481_07695 PF00348 Polyprenyl synthetase AM481_07700 PF04237 YjbR AM481_07705 PF01145 SPFH domain / Band 7 family AM481_07715 PF01734 Patatin-like phospholipase AM481_07735 PF08019 Phosphoethanolamine transferase EptA/EptB AM481_07735 PF00884 Sulfatase AM481_07740 PF00072 Response regulator receiver domain AM481_07740 PF00486 Transcriptional regulatory protein, C terminal AM481_07745 PF08521 Two-component sensor kinase N-terminal AM481_07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_07745 PF00512 His Kinase A (phospho-acceptor) domain AM481_07755 PF00909 Ammonium Transporter Family AM481_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_07765 PF03466 LysR substrate binding domain AM481_07785 PF00133 tRNA synthetases class I (I, L, M and V) AM481_07785 PF10458 Valyl tRNA synthetase tRNA binding arm AM481_07785 PF08264 Anticodon-binding domain of tRNA AM481_07805 PF01906 Putative heavy-metal-binding AM481_07810 PF01906 Putative heavy-metal-binding AM481_07815 PF02321 Outer membrane efflux protein AM481_07820 PF00873 AcrB/AcrD/AcrF family AM481_07825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_07825 PF00529 HlyD membrane-fusion protein of T1SS AM481_07830 PF01569 PAP2 superfamily AM481_07840 PF00348 Polyprenyl synthetase AM481_07850 PF00829 Ribosomal prokaryotic L21 protein AM481_07855 PF01016 Ribosomal L27 protein AM481_07860 PF03548 Outer membrane lipoprotein carrier protein LolA AM481_07870 PF02403 Seryl-tRNA synthetase N-terminal domain AM481_07870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM481_07875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM481_07875 PF10414 Sirohaem synthase dimerisation region AM481_07875 PF14824 Sirohaem biosynthesis protein central AM481_07880 PF00588 SpoU rRNA Methylase family AM481_07885 PF01638 HxlR-like helix-turn-helix AM481_07890 PF03358 NADPH-dependent FMN reductase AM481_07895 PF13520 Amino acid permease AM481_07900 PF00465 Iron-containing alcohol dehydrogenase AM481_07910 PF03099 Biotin/lipoate A/B protein ligase family AM481_07915 PF04359 Protein of unknown function (DUF493) AM481_07920 PF04539 Sigma-70 region 3 AM481_07920 PF04546 Sigma-70, non-essential region AM481_07920 PF00140 Sigma-70 factor, region 1.2 AM481_07920 PF04545 Sigma-70, region 4 AM481_07920 PF04542 Sigma-70 region 2 AM481_07920 PF03979 Sigma-70 factor, region 1.1 AM481_07950 PF00285 Citrate synthase, C-terminal domain AM481_07955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM481_07960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM481_07965 PF00890 FAD binding domain AM481_07965 PF02910 Fumarate reductase flavoprotein C-term AM481_07970 PF13085 2Fe-2S iron-sulfur cluster binding domain AM481_07985 PF16078 2-oxoglutarate dehydrogenase N-terminus AM481_07985 PF16870 2-oxoglutarate dehydrogenase C-terminal AM481_07985 PF02779 Transketolase, pyrimidine binding domain AM481_07985 PF00676 Dehydrogenase E1 component AM481_07990 PF02817 e3 binding domain AM481_07990 PF00364 Biotin-requiring enzyme AM481_07990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM481_07995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_07995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM481_08000 PF08442 ATP-grasp domain AM481_08000 PF00549 CoA-ligase AM481_08005 PF00549 CoA-ligase AM481_08005 PF02629 CoA binding domain AM481_08010 PF00579 tRNA synthetases class I (W and Y) AM481_08015 PF05661 Protein of unknown function (DUF808) AM481_08020 PF04228 Putative neutral zinc metallopeptidase AM481_08025 PF00999 Sodium/hydrogen exchanger family AM481_08055 PF09587 Bacterial capsule synthesis protein PGA_cap AM481_08065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM481_08070 PF00582 Universal stress protein family AM481_08075 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_08080 PF01272 Transcription elongation factor, GreA/GreB, C-term AM481_08080 PF03449 Transcription elongation factor, N-terminal AM481_08085 PF02142 MGS-like domain AM481_08085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM481_08085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM481_08090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM481_08090 PF00117 Glutamine amidotransferase class-I AM481_08105 PF01985 CRS1 / YhbY (CRM) domain AM481_08110 PF01728 FtsJ-like methyltransferase AM481_08115 PF17862 AAA+ lid domain AM481_08115 PF06480 FtsH Extracellular AM481_08115 PF00004 ATPase family associated with various cellular activities (AAA) AM481_08115 PF01434 Peptidase family M41 AM481_08120 PF00809 Pterin binding enzyme AM481_08140 PF16655 PhoD-like phosphatase, N-terminal domain AM481_08140 PF09423 PhoD-like phosphatase AM481_08155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM481_08155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM481_08170 PF00083 Sugar (and other) transporter AM481_08175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM481_08175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM481_08180 PF01266 FAD dependent oxidoreductase AM481_08180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM481_08185 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM481_08185 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM481_08190 PF00781 Diacylglycerol kinase catalytic domain AM481_08195 PF00149 Calcineurin-like phosphoesterase AM481_08205 PF00166 Chaperonin 10 Kd subunit AM481_08210 PF00118 TCP-1/cpn60 chaperonin family AM481_08215 PF01219 Prokaryotic diacylglycerol kinase AM481_08220 PF00753 Metallo-beta-lactamase superfamily AM481_08225 PF03009 Glycerophosphoryl diester phosphodiesterase family AM481_08230 PF00873 AcrB/AcrD/AcrF family AM481_08240 PF01435 Peptidase family M48 AM481_08245 PF01464 Transglycosylase SLT domain AM481_08255 PF01171 PP-loop family AM481_08265 PF01464 Transglycosylase SLT domain AM481_08265 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM481_08270 PF01272 Transcription elongation factor, GreA/GreB, C-term AM481_08270 PF03449 Transcription elongation factor, N-terminal AM481_08285 PF00501 AMP-binding enzyme AM481_08285 PF00975 Thioesterase domain AM481_08285 PF00550 Phosphopantetheine attachment site AM481_08285 PF13193 AMP-binding enzyme C-terminal domain AM481_08285 PF00668 Condensation domain AM481_08315 PF00881 Nitroreductase family AM481_08330 PF02595 Glycerate kinase family AM481_08335 PF00384 Molybdopterin oxidoreductase AM481_08340 PF02634 FdhD/NarQ family AM481_08345 PF06803 Protein of unknown function (DUF1232) AM481_08350 PF11890 Domain of unknown function (DUF3410) AM481_08350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM481_08350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM481_08355 PF00152 tRNA synthetases class II (D, K and N) AM481_08365 PF18073 Rubredoxin metal binding domain AM481_08370 PF00324 Amino acid permease AM481_08380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM481_08380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM481_08385 PF01678 Diaminopimelate epimerase AM481_08390 PF01810 LysE type translocator AM481_08395 PF02899 Phage integrase, N-terminal SAM-like domain AM481_08395 PF00589 Phage integrase family AM481_08400 PF01012 Electron transfer flavoprotein domain AM481_08405 PF00766 Electron transfer flavoprotein FAD-binding domain AM481_08405 PF01012 Electron transfer flavoprotein domain AM481_08410 PF00521 DNA gyrase/topoisomerase IV, subunit A AM481_08410 PF03989 DNA gyrase C-terminal domain, beta-propeller AM481_08425 PF00535 Glycosyl transferase family 2 AM481_08445 PF13533 Biotin-lipoyl like AM481_08455 PF00266 Aminotransferase class-V AM481_08465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM481_08475 PF02687 FtsX-like permease family AM481_08475 PF12704 MacB-like periplasmic core domain AM481_08480 PF00005 ABC transporter AM481_08485 PF00753 Metallo-beta-lactamase superfamily AM481_08485 PF13567 Domain of unknown function (DUF4131) AM481_08485 PF03772 Competence protein AM481_08495 PF01343 Peptidase family S49 AM481_08495 PF06965 Na+/H+ antiporter 1 AM481_08500 PF12697 Alpha/beta hydrolase family AM481_08505 PF00551 Formyl transferase AM481_08510 PF02769 AIR synthase related protein, C-terminal domain AM481_08510 PF00586 AIR synthase related protein, N-terminal domain AM481_08515 PF01594 AI-2E family transporter AM481_08520 PF08299 Bacterial dnaA protein helix-turn-helix AM481_08520 PF00308 Bacterial dnaA protein AM481_08520 PF11638 DnaA N-terminal domain AM481_08550 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM481_08550 PF00588 SpoU rRNA Methylase family AM481_08555 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM481_08565 PF00691 OmpA family AM481_08570 PF04052 TolB amino-terminal domain AM481_08570 PF07676 WD40-like Beta Propeller Repeat AM481_08580 PF02472 Biopolymer transport protein ExbD/TolR AM481_08585 PF01618 MotA/TolQ/ExbB proton channel family AM481_08590 PF03061 Thioesterase superfamily AM481_08595 PF01546 Peptidase family M20/M25/M40 AM481_08595 PF07687 Peptidase dimerisation domain AM481_08600 PF17864 RuvB AAA lid domain AM481_08600 PF05491 RuvB C-terminal winged helix domain AM481_08600 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM481_08605 PF07499 RuvA, C-terminal domain AM481_08605 PF01330 RuvA N terminal domain AM481_08610 PF01966 HD domain AM481_08615 PF02769 AIR synthase related protein, C-terminal domain AM481_08615 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM481_08615 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM481_08620 PF07690 Major Facilitator Superfamily AM481_08625 PF01784 NIF3 (NGG1p interacting factor 3) AM481_08630 PF00378 Enoyl-CoA hydratase/isomerase AM481_08635 PF01467 Cytidylyltransferase-like AM481_08635 PF00293 NUDIX domain AM481_08645 PF00578 AhpC/TSA family AM481_08660 PF06508 Queuosine biosynthesis protein QueC AM481_08670 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM481_08670 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_08670 PF14602 Hexapeptide repeat of succinyl-transferase AM481_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_08680 PF03466 LysR substrate binding domain AM481_08685 PF12857 TOBE-like domain AM481_08685 PF00005 ABC transporter AM481_08690 PF00528 Binding-protein-dependent transport system inner membrane component AM481_08695 PF00528 Binding-protein-dependent transport system inner membrane component AM481_08710 PF01063 Amino-transferase class IV AM481_08715 PF02618 YceG-like family AM481_08720 PF02223 Thymidylate kinase AM481_08730 PF02910 Fumarate reductase flavoprotein C-term AM481_08730 PF00890 FAD binding domain AM481_08735 PF13180 PDZ domain AM481_08745 PF00009 Elongation factor Tu GTP binding domain AM481_08745 PF06421 GTP-binding protein LepA C-terminus AM481_08745 PF00679 Elongation factor G C-terminus AM481_08745 PF03144 Elongation factor Tu domain 2 AM481_08750 PF10502 Signal peptidase, peptidase S26 AM481_08760 PF00035 Double-stranded RNA binding motif AM481_08760 PF14622 Ribonuclease-III-like AM481_08765 PF07650 KH domain AM481_08765 PF01926 50S ribosome-binding GTPase AM481_08775 PF11967 Recombination protein O N terminal AM481_08775 PF02565 Recombination protein O C terminal AM481_08780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM481_08785 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM481_08790 PF00106 short chain dehydrogenase AM481_08830 PF17151 Periplasmic sensor domain AM481_08830 PF00990 Diguanylate cyclase, GGDEF domain AM481_08840 PF02151 UvrB/uvrC motif AM481_08840 PF12344 Ultra-violet resistance protein B AM481_08840 PF04851 Type III restriction enzyme, res subunit AM481_08840 PF17757 UvrB interaction domain AM481_08840 PF00271 Helicase conserved C-terminal domain AM481_08850 PF00892 EamA-like transporter family AM481_08855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM481_08855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM481_08870 PF01926 50S ribosome-binding GTPase AM481_08870 PF01018 GTP1/OBG AM481_08875 PF01472 PUA domain AM481_08875 PF00696 Amino acid kinase family AM481_08885 PF07759 Protein of unknown function (DUF1615) AM481_08890 PF01207 Dihydrouridine synthase (Dus) AM481_08895 PF03060 Nitronate monooxygenase AM481_08910 PF02350 UDP-N-acetylglucosamine 2-epimerase AM481_08940 PF03441 FAD binding domain of DNA photolyase AM481_08940 PF00875 DNA photolyase AM481_08945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_08950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_08955 PF07943 Penicillin-binding protein 5, C-terminal domain AM481_08955 PF00768 D-alanyl-D-alanine carboxypeptidase AM481_08965 PF03971 Monomeric isocitrate dehydrogenase AM481_08970 PF00849 RNA pseudouridylate synthase AM481_08975 PF00180 Isocitrate/isopropylmalate dehydrogenase AM481_08995 PF06779 Uncharacterised MFS-type transporter YbfB AM481_09000 PF03466 LysR substrate binding domain AM481_09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_09010 PF02567 Phenazine biosynthesis-like protein AM481_09015 PF05193 Peptidase M16 inactive domain AM481_09015 PF00675 Insulinase (Peptidase family M16) AM481_09040 PF02581 Thiamine monophosphate synthase AM481_09045 PF00202 Aminotransferase class-III AM481_09055 PF00849 RNA pseudouridylate synthase AM481_09060 PF00271 Helicase conserved C-terminal domain AM481_09060 PF18337 RapA N-terminal Tudor like domain AM481_09060 PF12137 RNA polymerase recycling family C-terminal AM481_09060 PF18339 RapA N-terminal Tudor like domain 1 AM481_09060 PF00176 SNF2 family N-terminal domain AM481_09070 PF00440 Bacterial regulatory proteins, tetR family AM481_09075 PF00175 Oxidoreductase NAD-binding domain AM481_09075 PF00970 Oxidoreductase FAD-binding domain AM481_09075 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_09080 PF00487 Fatty acid desaturase AM481_09090 PF17754 MftR C-terminal domain AM481_09090 PF00440 Bacterial regulatory proteins, tetR family AM481_09100 PF00202 Aminotransferase class-III AM481_09105 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM481_09110 PF00171 Aldehyde dehydrogenase family AM481_09115 PF01037 Lrp/AsnC ligand binding domain AM481_09120 PF00205 Thiamine pyrophosphate enzyme, central domain AM481_09120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM481_09120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM481_09125 PF00324 Amino acid permease AM481_09130 PF12849 PBP superfamily domain AM481_09135 PF00528 Binding-protein-dependent transport system inner membrane component AM481_09140 PF00528 Binding-protein-dependent transport system inner membrane component AM481_09145 PF00005 ABC transporter AM481_09150 PF08496 Peptidase family S49 N-terminal AM481_09150 PF01343 Peptidase family S49 AM481_09165 PF08328 Adenylosuccinate lyase C-terminal AM481_09165 PF00206 Lyase AM481_09170 PF04356 Protein of unknown function (DUF489) AM481_09180 PF00293 NUDIX domain AM481_09180 PF13344 Haloacid dehalogenase-like hydrolase AM481_09185 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_09190 PF00768 D-alanyl-D-alanine carboxypeptidase AM481_09190 PF07943 Penicillin-binding protein 5, C-terminal domain AM481_09205 PF01975 Survival protein SurE AM481_09210 PF01476 LysM domain AM481_09210 PF01551 Peptidase family M23 AM481_09215 PF03466 LysR substrate binding domain AM481_09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_09220 PF13654 AAA domain AM481_09220 PF05362 Lon protease (S16) C-terminal proteolytic domain AM481_09225 PF07690 Major Facilitator Superfamily AM481_09230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM481_09235 PF13593 SBF-like CPA transporter family (DUF4137) AM481_09240 PF01197 Ribosomal protein L31 AM481_09255 PF04055 Radical SAM superfamily AM481_09260 PF08207 Elongation factor P (EF-P) KOW-like domain AM481_09260 PF09285 Elongation factor P, C-terminal AM481_09260 PF01132 Elongation factor P (EF-P) OB domain AM481_09265 PF13722 5TM C-terminal transporter carbon starvation CstA AM481_09265 PF02554 Carbon starvation protein CstA AM481_09270 PF04328 Selenoprotein, putative AM481_09305 PF06018 CodY GAF-like domain AM481_09305 PF13556 PucR C-terminal helix-turn-helix domain AM481_09305 PF17853 GGDEF-like domain AM481_09320 PF00171 Aldehyde dehydrogenase family AM481_09325 PF00324 Amino acid permease AM481_09330 PF03466 LysR substrate binding domain AM481_09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_09335 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_09340 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_09345 PF00355 Rieske [2Fe-2S] domain AM481_09345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM481_09355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_09355 PF18113 Rubredoxin binding C-terminal domain AM481_09360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM481_09360 PF01266 FAD dependent oxidoreductase AM481_09380 PF00892 EamA-like transporter family AM481_09390 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM481_09395 PF00083 Sugar (and other) transporter AM481_09400 PF13378 Enolase C-terminal domain-like AM481_09400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM481_09405 PF00698 Acyl transferase domain AM481_09405 PF08659 KR domain AM481_09405 PF00550 Phosphopantetheine attachment site AM481_09405 PF08990 Erythronolide synthase docking AM481_09405 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_09405 PF09277 Erythronolide synthase, docking AM481_09405 PF08240 Alcohol dehydrogenase GroES-like domain AM481_09405 PF16197 Ketoacyl-synthetase C-terminal extension AM481_09405 PF14765 Polyketide synthase dehydratase AM481_09405 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_09410 PF00440 Bacterial regulatory proteins, tetR family AM481_09430 PF17954 Quercetinase C-terminal cupin domain AM481_09430 PF02678 Pirin AM481_09440 PF13309 HTH domain AM481_09440 PF08348 YheO-like PAS domain AM481_09450 PF00668 Condensation domain AM481_09450 PF00501 AMP-binding enzyme AM481_09450 PF13193 AMP-binding enzyme C-terminal domain AM481_09450 PF00550 Phosphopantetheine attachment site AM481_09455 PF00501 AMP-binding enzyme AM481_09455 PF13193 AMP-binding enzyme C-terminal domain AM481_09455 PF00668 Condensation domain AM481_09455 PF00550 Phosphopantetheine attachment site AM481_09455 PF00975 Thioesterase domain AM481_09460 PF01032 FecCD transport family AM481_09465 PF01032 FecCD transport family AM481_09470 PF00005 ABC transporter AM481_09475 PF01497 Periplasmic binding protein AM481_09480 PF00593 TonB dependent receptor AM481_09480 PF07715 TonB-dependent Receptor Plug Domain AM481_09485 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM481_09490 PF00501 AMP-binding enzyme AM481_09490 PF00550 Phosphopantetheine attachment site AM481_09490 PF00668 Condensation domain AM481_09495 PF13193 AMP-binding enzyme C-terminal domain AM481_09495 PF00501 AMP-binding enzyme AM481_09500 PF00550 Phosphopantetheine attachment site AM481_09500 PF00857 Isochorismatase family AM481_09505 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM481_09515 PF00005 ABC transporter AM481_09515 PF00664 ABC transporter transmembrane region AM481_09520 PF00664 ABC transporter transmembrane region AM481_09520 PF00005 ABC transporter AM481_09525 PF00975 Thioesterase domain AM481_09535 PF00425 chorismate binding enzyme AM481_09545 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM481_09550 PF05675 Protein of unknown function (DUF817) AM481_09565 PF00144 Beta-lactamase AM481_09580 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_09580 PF01799 [2Fe-2S] binding domain AM481_09585 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM481_09585 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM481_09600 PF00218 Indole-3-glycerol phosphate synthase AM481_09605 PF00591 Glycosyl transferase family, a/b domain AM481_09605 PF02885 Glycosyl transferase family, helical bundle domain AM481_09610 PF07715 TonB-dependent Receptor Plug Domain AM481_09610 PF00593 TonB dependent receptor AM481_09615 PF01433 Peptidase family M1 domain AM481_09615 PF11838 ERAP1-like C-terminal domain AM481_09620 PF00117 Glutamine amidotransferase class-I AM481_09920 PF01551 Peptidase family M23 AM481_09920 PF01476 LysM domain AM481_09920 PF08525 Opacity-associated protein A N-terminal motif AM481_09995 PF13356 Arm DNA-binding domain AM481_09995 PF00589 Phage integrase family AM481_10010 PF00854 POT family AM481_10020 PF04345 Chorismate lyase AM481_10025 PF01040 UbiA prenyltransferase family AM481_10060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM481_10060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM481_10065 PF01784 NIF3 (NGG1p interacting factor 3) AM481_10070 PF13180 PDZ domain AM481_10075 PF01743 Poly A polymerase head domain AM481_10075 PF12627 Probable RNA and SrmB- binding site of polymerase A AM481_10080 PF00390 Malic enzyme, N-terminal domain AM481_10080 PF03949 Malic enzyme, NAD binding domain AM481_10080 PF01515 Phosphate acetyl/butaryl transferase AM481_10085 PF03707 Bacterial signalling protein N terminal repeat AM481_10085 PF00990 Diguanylate cyclase, GGDEF domain AM481_10085 PF00563 EAL domain AM481_10090 PF04452 RNA methyltransferase AM481_10095 PF02219 Methylenetetrahydrofolate reductase AM481_10100 PF05221 S-adenosyl-L-homocysteine hydrolase AM481_10100 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM481_10115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_10115 PF09317 Domain of unknown function (DUF1974) AM481_10115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_10120 PF04055 Radical SAM superfamily AM481_10125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_10125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM481_10135 PF07690 Major Facilitator Superfamily AM481_10145 PF00557 Metallopeptidase family M24 AM481_10150 PF00318 Ribosomal protein S2 AM481_10155 PF00889 Elongation factor TS AM481_10165 PF12833 Helix-turn-helix domain AM481_10185 PF05036 Sporulation related domain AM481_10185 PF03330 Lytic transglycolase AM481_10190 PF13406 Transglycosylase SLT domain AM481_10195 PF01098 Cell cycle protein AM481_10205 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM481_10205 PF14489 QueF-like protein AM481_10210 PF01061 ABC-2 type transporter AM481_10215 PF00005 ABC transporter AM481_10245 PF00464 Serine hydroxymethyltransferase AM481_10250 PF02321 Outer membrane efflux protein AM481_10255 PF00873 AcrB/AcrD/AcrF family AM481_10260 PF13533 Biotin-lipoyl like AM481_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_10265 PF03466 LysR substrate binding domain AM481_10270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM481_10275 PF00528 Binding-protein-dependent transport system inner membrane component AM481_10280 PF00528 Binding-protein-dependent transport system inner membrane component AM481_10285 PF00005 ABC transporter AM481_10290 PF00893 Small Multidrug Resistance protein AM481_10295 PF00037 4Fe-4S binding domain AM481_10305 PF00392 Bacterial regulatory proteins, gntR family AM481_10305 PF00155 Aminotransferase class I and II AM481_10310 PF02567 Phenazine biosynthesis-like protein AM481_10315 PF00970 Oxidoreductase FAD-binding domain AM481_10315 PF00175 Oxidoreductase NAD-binding domain AM481_10320 PF18389 TrmO C-terminal domain AM481_10320 PF01980 tRNA-methyltransferase O AM481_10330 PF00437 Type II/IV secretion system protein AM481_10340 PF00072 Response regulator receiver domain AM481_10340 PF00486 Transcriptional regulatory protein, C terminal AM481_10345 PF00512 His Kinase A (phospho-acceptor) domain AM481_10345 PF08521 Two-component sensor kinase N-terminal AM481_10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_10355 PF00293 NUDIX domain AM481_10365 PF14814 Bifunctional transglycosylase second domain AM481_10365 PF00912 Transglycosylase AM481_10365 PF00905 Penicillin binding protein transpeptidase domain AM481_10370 PF01513 ATP-NAD kinase AM481_10375 PF07023 Protein of unknown function (DUF1315) AM481_10380 PF00591 Glycosyl transferase family, a/b domain AM481_10380 PF02885 Glycosyl transferase family, helical bundle domain AM481_10390 PF00375 Sodium:dicarboxylate symporter family AM481_10395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_10395 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_10395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_10400 PF00756 Putative esterase AM481_10405 PF00800 Prephenate dehydratase AM481_10405 PF01817 Chorismate mutase type II AM481_10405 PF01842 ACT domain AM481_10410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM481_10420 PF01546 Peptidase family M20/M25/M40 AM481_10420 PF07687 Peptidase dimerisation domain AM481_10425 PF12706 Beta-lactamase superfamily domain AM481_10435 PF03883 Peroxide stress protein YaaA AM481_10445 PF05690 Thiazole biosynthesis protein ThiG AM481_10455 PF04241 Protein of unknown function (DUF423) AM481_10460 PF04542 Sigma-70 region 2 AM481_10460 PF04545 Sigma-70, region 4 AM481_10460 PF00140 Sigma-70 factor, region 1.2 AM481_10470 PF00313 'Cold-shock' DNA-binding domain AM481_10475 PF00270 DEAD/DEAH box helicase AM481_10475 PF00271 Helicase conserved C-terminal domain AM481_10485 PF00881 Nitroreductase family AM481_10490 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM481_10490 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM481_10510 PF01180 Dihydroorotate dehydrogenase AM481_10515 PF02674 Colicin V production protein AM481_10520 PF00156 Phosphoribosyl transferase domain AM481_10535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM481_10535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM481_10540 PF01435 Peptidase family M48 AM481_10545 PF09424 Yqey-like protein AM481_10550 PF01165 Ribosomal protein S21 AM481_10555 PF00814 Glycoprotease family AM481_10575 PF00069 Protein kinase domain AM481_10600 PF03466 LysR substrate binding domain AM481_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_10605 PF00202 Aminotransferase class-III AM481_10610 PF00171 Aldehyde dehydrogenase family AM481_10615 PF00324 Amino acid permease AM481_10645 PF04076 Bacterial OB fold (BOF) protein AM481_10670 PF00561 alpha/beta hydrolase fold AM481_10675 PF03616 Sodium/glutamate symporter AM481_10685 PF07729 FCD domain AM481_10685 PF00392 Bacterial regulatory proteins, gntR family AM481_10735 PF00083 Sugar (and other) transporter AM481_10735 PF08946 Osmosensory transporter coiled coil AM481_10760 PF00155 Aminotransferase class I and II AM481_10765 PF06826 Predicted Permease Membrane Region AM481_10765 PF02080 TrkA-C domain AM481_10775 PF04403 Paraquat-inducible protein A AM481_10780 PF02470 MlaD protein AM481_10790 PF01177 Asp/Glu/Hydantoin racemase AM481_10795 PF00892 EamA-like transporter family AM481_10800 PF07995 Glucose / Sorbosone dehydrogenase AM481_10810 PF13610 DDE domain AM481_10820 PF13610 DDE domain AM481_10825 PF00589 Phage integrase family AM481_10825 PF13495 Phage integrase, N-terminal SAM-like domain AM481_10835 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_10840 PF13427 Domain of unknown function (DUF4111) AM481_10840 PF01909 Nucleotidyltransferase domain AM481_10845 PF00893 Small Multidrug Resistance protein AM481_10850 PF00809 Pterin binding enzyme AM481_10870 PF07091 Ribosomal RNA methyltransferase (FmrO) AM481_10895 PF01636 Phosphotransferase enzyme family AM481_10905 PF13007 Transposase C of IS166 homeodomain AM481_10905 PF13817 IS66 C-terminal element AM481_10905 PF03050 Transposase IS66 family AM481_10905 PF13005 zinc-finger binding domain of transposase IS66 AM481_10930 PF13610 DDE domain AM481_10950 PF00375 Sodium:dicarboxylate symporter family AM481_10960 PF00753 Metallo-beta-lactamase superfamily AM481_10960 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM481_10965 PF00528 Binding-protein-dependent transport system inner membrane component AM481_10970 PF00005 ABC transporter AM481_10970 PF09383 NIL domain AM481_10975 PF03180 NLPA lipoprotein AM481_10980 PF02844 Phosphoribosylglycinamide synthetase, N domain AM481_10980 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM481_10980 PF02843 Phosphoribosylglycinamide synthetase, C domain AM481_10985 PF02142 MGS-like domain AM481_10985 PF01808 AICARFT/IMPCHase bienzyme AM481_10990 PF02954 Bacterial regulatory protein, Fis family AM481_11010 PF01134 Glucose inhibited division protein A AM481_11010 PF13932 GidA associated domain AM481_11020 PF14403 Circularly permuted ATP-grasp type 2 AM481_11030 PF01841 Transglutaminase-like superfamily AM481_11030 PF08379 Bacterial transglutaminase-like N-terminal region AM481_11040 PF01168 Alanine racemase, N-terminal domain AM481_11040 PF00842 Alanine racemase, C-terminal domain AM481_11045 PF03796 DnaB-like helicase C terminal domain AM481_11045 PF00772 DnaB-like helicase N terminal domain AM481_11050 PF01281 Ribosomal protein L9, N-terminal domain AM481_11050 PF03948 Ribosomal protein L9, C-terminal domain AM481_11055 PF01084 Ribosomal protein S18 AM481_11060 PF01250 Ribosomal protein S6 AM481_11065 PF01040 UbiA prenyltransferase family AM481_11070 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM481_11075 PF00510 Cytochrome c oxidase subunit III AM481_11080 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM481_11085 PF06481 COX Aromatic Rich Motif AM481_11085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM481_11095 PF02896 PEP-utilising enzyme, TIM barrel domain AM481_11095 PF00391 PEP-utilising enzyme, mobile domain AM481_11095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM481_11100 PF03618 Kinase/pyrophosphorylase AM481_11110 PF14883 Hypothetical glycosyl hydrolase family 13 AM481_11110 PF01522 Polysaccharide deacetylase AM481_11115 PF00535 Glycosyl transferase family 2 AM481_11120 PF13994 PgaD-like protein AM481_11130 PF00296 Luciferase-like monooxygenase AM481_11150 PF03466 LysR substrate binding domain AM481_11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_11160 PF00472 RF-1 domain AM481_11160 PF03462 PCRF domain AM481_11165 PF17827 PrmC N-terminal domain AM481_11165 PF13847 Methyltransferase domain AM481_11170 PF00528 Binding-protein-dependent transport system inner membrane component AM481_11175 PF09084 NMT1/THI5 like AM481_11180 PF12833 Helix-turn-helix domain AM481_11185 PF00106 short chain dehydrogenase AM481_11190 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_11190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_11190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_11195 PF00501 AMP-binding enzyme AM481_11195 PF13193 AMP-binding enzyme C-terminal domain AM481_11200 PF01613 Flavin reductase like domain AM481_11205 PF00899 ThiF family AM481_11210 PF03109 ABC1 family AM481_11225 PF03814 Potassium-transporting ATPase A subunit AM481_11235 PF02669 K+-transporting ATPase, c chain AM481_11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_11240 PF00512 His Kinase A (phospho-acceptor) domain AM481_11240 PF02702 Osmosensitive K+ channel His kinase sensor domain AM481_11240 PF13493 Domain of unknown function (DUF4118) AM481_11245 PF00486 Transcriptional regulatory protein, C terminal AM481_11245 PF00072 Response regulator receiver domain AM481_11250 PF00120 Glutamine synthetase, catalytic domain AM481_11260 PF03232 Ubiquinone biosynthesis protein COQ7 AM481_11265 PF07690 Major Facilitator Superfamily AM481_11270 PF07244 Surface antigen variable number repeat AM481_11270 PF17243 POTRA domain TamA domain 1 AM481_11270 PF01103 Surface antigen AM481_11290 PF06434 Aconitate hydratase 2 N-terminus AM481_11290 PF11791 Aconitate B N-terminal domain AM481_11290 PF00330 Aconitase family (aconitate hydratase) AM481_11300 PF00027 Cyclic nucleotide-binding domain AM481_11300 PF00520 Ion transport protein AM481_11305 PF07690 Major Facilitator Superfamily AM481_11320 PF03466 LysR substrate binding domain AM481_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_11325 PF04284 Protein of unknown function (DUF441) AM481_11335 PF00849 RNA pseudouridylate synthase AM481_11335 PF01479 S4 domain AM481_11350 PF00849 RNA pseudouridylate synthase AM481_11350 PF01479 S4 domain AM481_11355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM481_11360 PF08676 MutL C terminal dimerisation domain AM481_11360 PF01119 DNA mismatch repair protein, C-terminal domain AM481_11370 PF17209 Hfq protein AM481_11380 PF00881 Nitroreductase family AM481_11390 PF00149 Calcineurin-like phosphoesterase AM481_11395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM481_11400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM481_11400 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM481_11405 PF00958 GMP synthase C terminal domain AM481_11405 PF00117 Glutamine amidotransferase class-I AM481_11405 PF02540 NAD synthase AM481_11410 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM481_11415 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM481_11420 PF13520 Amino acid permease AM481_11425 PF00171 Aldehyde dehydrogenase family AM481_11440 PF00465 Iron-containing alcohol dehydrogenase AM481_11445 PF05970 PIF1-like helicase AM481_11445 PF14493 Helix-turn-helix domain AM481_11455 PF06445 GyrI-like small molecule binding domain AM481_11460 PF02110 Hydroxyethylthiazole kinase family AM481_11475 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM481_11475 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM481_11475 PF01433 Peptidase family M1 domain AM481_11485 PF00106 short chain dehydrogenase AM481_11495 PF01817 Chorismate mutase type II AM481_11500 PF01037 Lrp/AsnC ligand binding domain AM481_11515 PF00440 Bacterial regulatory proteins, tetR family AM481_11520 PF00593 TonB dependent receptor AM481_11520 PF07715 TonB-dependent Receptor Plug Domain AM481_11525 PF00924 Mechanosensitive ion channel AM481_11560 PF00593 TonB dependent receptor AM481_11560 PF07715 TonB-dependent Receptor Plug Domain AM481_11580 PF12848 ABC transporter AM481_11580 PF00005 ABC transporter AM481_11585 PF00582 Universal stress protein family AM481_11600 PF00690 Cation transporter/ATPase, N-terminus AM481_11600 PF00689 Cation transporting ATPase, C-terminus AM481_11605 PF02308 MgtC family AM481_11610 PF03594 Benzoate membrane transport protein AM481_11615 PF01037 Lrp/AsnC ligand binding domain AM481_11620 PF01810 LysE type translocator AM481_11630 PF03466 LysR substrate binding domain AM481_11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_11640 PF02803 Thiolase, C-terminal domain AM481_11640 PF00108 Thiolase, N-terminal domain AM481_11665 PF07690 Major Facilitator Superfamily AM481_11670 PF12169 DNA polymerase III subunits gamma and tau domain III AM481_11670 PF12170 DNA polymerase III tau subunit V interacting with alpha AM481_11670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM481_11675 PF05506 Domain of unknown function (DUF756) AM481_11675 PF04185 Phosphoesterase family AM481_11680 PF03061 Thioesterase superfamily AM481_11685 PF00465 Iron-containing alcohol dehydrogenase AM481_11695 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM481_11700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM481_11700 PF01565 FAD binding domain AM481_11715 PF01645 Conserved region in glutamate synthase AM481_12015 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM481_12050 PF01476 LysM domain AM481_12050 PF01551 Peptidase family M23 AM481_12050 PF08525 Opacity-associated protein A N-terminal motif AM481_12145 PF12832 MFS_1 like family AM481_12155 PF02785 Biotin carboxylase C-terminal domain AM481_12155 PF00289 Biotin carboxylase, N-terminal domain AM481_12155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM481_12160 PF00364 Biotin-requiring enzyme AM481_12165 PF01220 Dehydroquinase class II AM481_12170 PF13438 Domain of unknown function (DUF4113) AM481_12170 PF00817 impB/mucB/samB family AM481_12170 PF11799 impB/mucB/samB family C-terminal domain AM481_12180 PF00005 ABC transporter AM481_12185 PF00486 Transcriptional regulatory protein, C terminal AM481_12185 PF00072 Response regulator receiver domain AM481_12195 PF04324 BFD-like [2Fe-2S] binding domain AM481_12195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_12195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM481_12195 PF13806 Rieske-like [2Fe-2S] domain AM481_12195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM481_12195 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM481_12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_12200 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM481_12200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM481_12200 PF04324 BFD-like [2Fe-2S] binding domain AM481_12200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM481_12205 PF00384 Molybdopterin oxidoreductase AM481_12205 PF01568 Molydopterin dinucleotide binding domain AM481_12205 PF04324 BFD-like [2Fe-2S] binding domain AM481_12205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM481_12210 PF12804 MobA-like NTP transferase domain AM481_12215 PF01568 Molydopterin dinucleotide binding domain AM481_12215 PF00384 Molybdopterin oxidoreductase AM481_12215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM481_12220 PF06463 Molybdenum Cofactor Synthesis C AM481_12220 PF04055 Radical SAM superfamily AM481_12230 PF02391 MoaE protein AM481_12235 PF01967 MoaC family AM481_12235 PF00994 Probable molybdopterin binding domain AM481_12240 PF00994 Probable molybdopterin binding domain AM481_12240 PF03454 MoeA C-terminal region (domain IV) AM481_12240 PF03453 MoeA N-terminal region (domain I and II) AM481_12245 PF01638 HxlR-like helix-turn-helix AM481_12250 PF00155 Aminotransferase class I and II AM481_12250 PF00392 Bacterial regulatory proteins, gntR family AM481_12255 PF00892 EamA-like transporter family AM481_12275 PF02635 DsrE/DsrF-like family AM481_12280 PF16363 GDP-mannose 4,6 dehydratase AM481_12285 PF00206 Lyase AM481_12285 PF10415 Fumarase C C-terminus AM481_12315 PF01266 FAD dependent oxidoreductase AM481_12325 PF02542 YgbB family AM481_12335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM481_12335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM481_12355 PF00158 Sigma-54 interaction domain AM481_12355 PF02954 Bacterial regulatory protein, Fis family AM481_12355 PF00072 Response regulator receiver domain AM481_12360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_12360 PF00989 PAS fold AM481_12360 PF00512 His Kinase A (phospho-acceptor) domain AM481_12365 PF04055 Radical SAM superfamily AM481_12365 PF18693 TRAM domain AM481_12365 PF00919 Uncharacterized protein family UPF0004 AM481_12370 PF00696 Amino acid kinase family AM481_12375 PF01765 Ribosome recycling factor AM481_12380 PF01255 Putative undecaprenyl diphosphate synthase AM481_12390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM481_12390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM481_12390 PF13288 DXP reductoisomerase C-terminal domain AM481_12395 PF17820 PDZ domain AM481_12395 PF02163 Peptidase family M50 AM481_12395 PF13180 PDZ domain AM481_12400 PF01103 Surface antigen AM481_12400 PF07244 Surface antigen variable number repeat AM481_12410 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_12410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM481_12415 PF07977 FabA-like domain AM481_12420 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_12420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM481_12435 PF02631 RecX family AM481_12440 PF00154 recA bacterial DNA recombination protein AM481_12445 PF01479 S4 domain AM481_12450 PF13419 Haloacid dehalogenase-like hydrolase AM481_12475 PF01037 Lrp/AsnC ligand binding domain AM481_12480 PF00266 Aminotransferase class-V AM481_12485 PF00324 Amino acid permease AM481_12495 PF00082 Subtilase family AM481_12495 PF05922 Peptidase inhibitor I9 AM481_12500 PF01740 STAS domain AM481_12500 PF00916 Sulfate permease family AM481_12505 PF02586 SOS response associated peptidase (SRAP) AM481_12510 PF07995 Glucose / Sorbosone dehydrogenase AM481_12520 PF03707 Bacterial signalling protein N terminal repeat AM481_12520 PF00990 Diguanylate cyclase, GGDEF domain AM481_12520 PF00563 EAL domain AM481_12540 PF02378 Phosphotransferase system, EIIC AM481_12540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM481_12545 PF00294 pfkB family carbohydrate kinase AM481_12550 PF00391 PEP-utilising enzyme, mobile domain AM481_12550 PF02896 PEP-utilising enzyme, TIM barrel domain AM481_12550 PF00381 PTS HPr component phosphorylation site AM481_12550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM481_12550 PF05524 PEP-utilising enzyme, N-terminal AM481_12575 PF05525 Branched-chain amino acid transport protein AM481_12580 PF00557 Metallopeptidase family M24 AM481_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_12585 PF03466 LysR substrate binding domain AM481_12595 PF00462 Glutaredoxin AM481_12600 PF00202 Aminotransferase class-III AM481_12605 PF00478 IMP dehydrogenase / GMP reductase domain AM481_12605 PF00571 CBS domain AM481_12630 PF02881 SRP54-type protein, helical bundle domain AM481_12630 PF00448 SRP54-type protein, GTPase domain AM481_12640 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM481_12655 PF08173 Membrane bound YbgT-like protein AM481_12660 PF02322 Cytochrome bd terminal oxidase subunit II AM481_12665 PF01654 Cytochrome bd terminal oxidase subunit I AM481_12675 PF07290 Protein of unknown function (DUF1449) AM481_12685 PF00294 pfkB family carbohydrate kinase AM481_12690 PF07715 TonB-dependent Receptor Plug Domain AM481_12690 PF00593 TonB dependent receptor AM481_12695 PF05193 Peptidase M16 inactive domain AM481_12695 PF00675 Insulinase (Peptidase family M16) AM481_12695 PF08367 Peptidase M16C associated AM481_12700 PF02253 Phospholipase A1 AM481_12705 PF02386 Cation transport protein AM481_12710 PF02080 TrkA-C domain AM481_12710 PF02254 TrkA-N domain AM481_12715 PF00291 Pyridoxal-phosphate dependent enzyme AM481_12715 PF00585 C-terminal regulatory domain of Threonine dehydratase AM481_12720 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM481_12735 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM481_12735 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM481_12745 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM481_12750 PF02861 Clp amino terminal domain, pathogenicity island component AM481_12750 PF17871 AAA lid domain AM481_12750 PF10431 C-terminal, D2-small domain, of ClpB protein AM481_12750 PF07724 AAA domain (Cdc48 subfamily) AM481_12750 PF00004 ATPase family associated with various cellular activities (AAA) AM481_12755 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM481_12760 PF00793 DAHP synthetase I family AM481_12775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_12775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_12805 PF06418 CTP synthase N-terminus AM481_12805 PF00117 Glutamine amidotransferase class-I AM481_12810 PF00793 DAHP synthetase I family AM481_12815 PF00113 Enolase, C-terminal TIM barrel domain AM481_12815 PF03952 Enolase, N-terminal domain AM481_12820 PF04239 Protein of unknown function (DUF421) AM481_12825 PF04977 Septum formation initiator AM481_12830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM481_12835 PF01144 Coenzyme A transferase AM481_12840 PF01144 Coenzyme A transferase AM481_12845 PF02803 Thiolase, C-terminal domain AM481_12845 PF00108 Thiolase, N-terminal domain AM481_12850 PF00206 Lyase AM481_12850 PF10397 Adenylosuccinate lyase C-terminus AM481_12855 PF00561 alpha/beta hydrolase fold AM481_12860 PF07690 Major Facilitator Superfamily AM481_12865 PF02627 Carboxymuconolactone decarboxylase family AM481_12870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM481_12870 PF00775 Dioxygenase AM481_12875 PF00775 Dioxygenase AM481_12880 PF01487 Type I 3-dehydroquinase AM481_12885 PF05048 Periplasmic copper-binding protein (NosD) AM481_12890 PF04966 Carbohydrate-selective porin, OprB family AM481_12895 PF13360 PQQ-like domain AM481_12895 PF01011 PQQ enzyme repeat AM481_12905 PF04143 Sulphur transport AM481_12915 PF00753 Metallo-beta-lactamase superfamily AM481_12920 PF09339 IclR helix-turn-helix domain AM481_12920 PF01614 Bacterial transcriptional regulator AM481_12925 PF03466 LysR substrate binding domain AM481_12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_12930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_12930 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_12930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_12945 PF00106 short chain dehydrogenase AM481_12955 PF07690 Major Facilitator Superfamily AM481_12965 PF01425 Amidase AM481_12970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM481_12985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM481_12985 PF00355 Rieske [2Fe-2S] domain AM481_13000 PF00175 Oxidoreductase NAD-binding domain AM481_13000 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_13005 PF01613 Flavin reductase like domain AM481_13010 PF12833 Helix-turn-helix domain AM481_13010 PF02311 AraC-like ligand binding domain AM481_13015 PF07833 Copper amine oxidase N-terminal domain AM481_13015 PF01179 Copper amine oxidase, enzyme domain AM481_13015 PF02727 Copper amine oxidase, N2 domain AM481_13015 PF02728 Copper amine oxidase, N3 domain AM481_13025 PF00171 Aldehyde dehydrogenase family AM481_13030 PF01804 Penicillin amidase AM481_13035 PF12146 Serine aminopeptidase, S33 AM481_13040 PF02803 Thiolase, C-terminal domain AM481_13040 PF00108 Thiolase, N-terminal domain AM481_13045 PF01144 Coenzyme A transferase AM481_13050 PF01144 Coenzyme A transferase AM481_13055 PF00775 Dioxygenase AM481_13055 PF04444 Catechol dioxygenase N terminus AM481_13060 PF02426 Muconolactone delta-isomerase AM481_13065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM481_13065 PF13378 Enolase C-terminal domain-like AM481_13070 PF03466 LysR substrate binding domain AM481_13070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13080 PF07729 FCD domain AM481_13080 PF00392 Bacterial regulatory proteins, gntR family AM481_13085 PF00920 Dehydratase family AM481_13090 PF07690 Major Facilitator Superfamily AM481_13100 PF00171 Aldehyde dehydrogenase family AM481_13120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_13120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_13120 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_13130 PF06506 Propionate catabolism activator AM481_13130 PF02954 Bacterial regulatory protein, Fis family AM481_13130 PF00158 Sigma-54 interaction domain AM481_13135 PF13193 AMP-binding enzyme C-terminal domain AM481_13135 PF00501 AMP-binding enzyme AM481_13140 PF04341 Protein of unknown function, DUF485 AM481_13145 PF00474 Sodium:solute symporter family AM481_13150 PF00107 Zinc-binding dehydrogenase AM481_13150 PF08240 Alcohol dehydrogenase GroES-like domain AM481_13155 PF00171 Aldehyde dehydrogenase family AM481_13165 PF00561 alpha/beta hydrolase fold AM481_13170 PF00199 Catalase AM481_13170 PF06628 Catalase-related immune-responsive AM481_13190 PF07859 alpha/beta hydrolase fold AM481_13195 PF01047 MarR family AM481_13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_13200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_13205 PF00106 short chain dehydrogenase AM481_13210 PF01872 RibD C-terminal domain AM481_13215 PF00376 MerR family regulatory protein AM481_13215 PF09278 MerR, DNA binding AM481_13225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_13235 PF12706 Beta-lactamase superfamily domain AM481_13240 PF00440 Bacterial regulatory proteins, tetR family AM481_13240 PF08359 YsiA-like protein, C-terminal region AM481_13250 PF00857 Isochorismatase family AM481_13255 PF03466 LysR substrate binding domain AM481_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13260 PF07995 Glucose / Sorbosone dehydrogenase AM481_13265 PF02254 TrkA-N domain AM481_13265 PF00999 Sodium/hydrogen exchanger family AM481_13275 PF07687 Peptidase dimerisation domain AM481_13275 PF01546 Peptidase family M20/M25/M40 AM481_13290 PF17287 POTRA domain AM481_13290 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM481_13290 PF08479 POTRA domain, ShlB-type AM481_13295 PF04829 Pre-toxin domain with VENN motif AM481_13295 PF13018 Extended Signal Peptide of Type V secretion system AM481_13295 PF05860 haemagglutination activity domain AM481_13295 PF13332 Hemagglutinin repeat AM481_13310 PF07690 Major Facilitator Superfamily AM481_13315 PF04909 Amidohydrolase AM481_13330 PF08450 SMP-30/Gluconolactonase/LRE-like region AM481_13340 PF03466 LysR substrate binding domain AM481_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13360 PF07690 Major Facilitator Superfamily AM481_13365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM481_13365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM481_13365 PF01842 ACT domain AM481_13370 PF03737 Aldolase/RraA AM481_13390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_13390 PF00529 HlyD membrane-fusion protein of T1SS AM481_13405 PF00171 Aldehyde dehydrogenase family AM481_13410 PF00920 Dehydratase family AM481_13420 PF03466 LysR substrate binding domain AM481_13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13425 PF01370 NAD dependent epimerase/dehydratase family AM481_13430 PF07690 Major Facilitator Superfamily AM481_13435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM481_13435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM481_13440 PF12833 Helix-turn-helix domain AM481_13440 PF06719 AraC-type transcriptional regulator N-terminus AM481_13455 PF08240 Alcohol dehydrogenase GroES-like domain AM481_13455 PF00107 Zinc-binding dehydrogenase AM481_13470 PF00005 ABC transporter AM481_13490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM481_13490 PF14572 Phosphoribosyl synthetase-associated domain AM481_13495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM481_13570 PF00196 Bacterial regulatory proteins, luxR family AM481_13575 PF01425 Amidase AM481_13580 PF13533 Biotin-lipoyl like AM481_13585 PF07690 Major Facilitator Superfamily AM481_13610 PF01975 Survival protein SurE AM481_13620 PF02824 TGS domain AM481_13620 PF13291 ACT domain AM481_13620 PF04607 Region found in RelA / SpoT proteins AM481_13675 PF12146 Serine aminopeptidase, S33 AM481_13680 PF02311 AraC-like ligand binding domain AM481_13680 PF12833 Helix-turn-helix domain AM481_13690 PF00672 HAMP domain AM481_13690 PF16527 Two-component sensor protein CpxA, periplasmic domain AM481_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_13690 PF00512 His Kinase A (phospho-acceptor) domain AM481_13695 PF00486 Transcriptional regulatory protein, C terminal AM481_13695 PF00072 Response regulator receiver domain AM481_13700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_13700 PF00529 HlyD membrane-fusion protein of T1SS AM481_13705 PF00873 AcrB/AcrD/AcrF family AM481_13710 PF02321 Outer membrane efflux protein AM481_13715 PF12146 Serine aminopeptidase, S33 AM481_13720 PF00743 Flavin-binding monooxygenase-like AM481_13725 PF01593 Flavin containing amine oxidoreductase AM481_13740 PF01266 FAD dependent oxidoreductase AM481_13760 PF16970 Type-1 fimbrial protein, A AM481_13770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM481_13770 PF02753 Pili assembly chaperone PapD, C-terminal domain AM481_13775 PF13954 PapC N-terminal domain AM481_13775 PF13953 PapC C-terminal domain AM481_13775 PF00577 Outer membrane usher protein AM481_13780 PF00419 Fimbrial protein AM481_13790 PF00107 Zinc-binding dehydrogenase AM481_13790 PF08240 Alcohol dehydrogenase GroES-like domain AM481_13800 PF00199 Catalase AM481_13815 PF13091 PLD-like domain AM481_13835 PF01244 Membrane dipeptidase (Peptidase family M19) AM481_13840 PF04055 Radical SAM superfamily AM481_13840 PF13186 Iron-sulfur cluster-binding domain AM481_13845 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM481_13850 PF03070 TENA/THI-4/PQQC family AM481_13855 PF12706 Beta-lactamase superfamily domain AM481_13860 PF08042 PqqA family AM481_13865 PF17941 Polyphosphate kinase C-terminal domain 1 AM481_13865 PF02503 Polyphosphate kinase middle domain AM481_13865 PF13089 Polyphosphate kinase N-terminal domain AM481_13865 PF13090 Polyphosphate kinase C-terminal domain 2 AM481_13870 PF00149 Calcineurin-like phosphoesterase AM481_13880 PF00857 Isochorismatase family AM481_13880 PF00550 Phosphopantetheine attachment site AM481_13885 PF00106 short chain dehydrogenase AM481_13890 PF03459 TOBE domain AM481_13890 PF00005 ABC transporter AM481_13895 PF00528 Binding-protein-dependent transport system inner membrane component AM481_13905 PF03459 TOBE domain AM481_13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13910 PF00355 Rieske [2Fe-2S] domain AM481_13910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM481_13915 PF00866 Ring hydroxylating beta subunit AM481_13920 PF00175 Oxidoreductase NAD-binding domain AM481_13920 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_13920 PF00970 Oxidoreductase FAD-binding domain AM481_13925 PF12833 Helix-turn-helix domain AM481_13925 PF14525 AraC-binding-like domain AM481_13935 PF01613 Flavin reductase like domain AM481_13950 PF01738 Dienelactone hydrolase family AM481_13955 PF07690 Major Facilitator Superfamily AM481_13960 PF12833 Helix-turn-helix domain AM481_13960 PF06719 AraC-type transcriptional regulator N-terminus AM481_13985 PF03466 LysR substrate binding domain AM481_13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_13995 PF01144 Coenzyme A transferase AM481_14000 PF01144 Coenzyme A transferase AM481_14005 PF02667 Short chain fatty acid transporter AM481_14010 PF00108 Thiolase, N-terminal domain AM481_14010 PF02803 Thiolase, C-terminal domain AM481_14015 PF03466 LysR substrate binding domain AM481_14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_14020 PF03466 LysR substrate binding domain AM481_14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_14035 PF00206 Lyase AM481_14035 PF10415 Fumarase C C-terminus AM481_14040 PF07715 TonB-dependent Receptor Plug Domain AM481_14040 PF00593 TonB dependent receptor AM481_14045 PF00083 Sugar (and other) transporter AM481_14060 PF00005 ABC transporter AM481_14065 PF00528 Binding-protein-dependent transport system inner membrane component AM481_14070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM481_14095 PF02525 Flavodoxin-like fold AM481_14100 PF01638 HxlR-like helix-turn-helix AM481_14105 PF06445 GyrI-like small molecule binding domain AM481_14105 PF12833 Helix-turn-helix domain AM481_14120 PF01925 Sulfite exporter TauE/SafE AM481_14125 PF04273 Putative phosphatase (DUF442) AM481_14125 PF00753 Metallo-beta-lactamase superfamily AM481_14130 PF04273 Putative phosphatase (DUF442) AM481_14130 PF00753 Metallo-beta-lactamase superfamily AM481_14135 PF02954 Bacterial regulatory protein, Fis family AM481_14135 PF00072 Response regulator receiver domain AM481_14135 PF00158 Sigma-54 interaction domain AM481_14140 PF01062 Bestrophin, RFP-TM, chloride channel AM481_14145 PF08240 Alcohol dehydrogenase GroES-like domain AM481_14145 PF00107 Zinc-binding dehydrogenase AM481_14150 PF00106 short chain dehydrogenase AM481_14155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_14155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM481_14160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM481_14160 PF00364 Biotin-requiring enzyme AM481_14160 PF02817 e3 binding domain AM481_14165 PF02780 Transketolase, C-terminal domain AM481_14165 PF02779 Transketolase, pyrimidine binding domain AM481_14170 PF00676 Dehydrogenase E1 component AM481_14175 PF04055 Radical SAM superfamily AM481_14190 PF00990 Diguanylate cyclase, GGDEF domain AM481_14190 PF08448 PAS fold AM481_14195 PF01264 Chorismate synthase AM481_14200 PF05175 Methyltransferase small domain AM481_14205 PF00291 Pyridoxal-phosphate dependent enzyme AM481_14215 PF17862 AAA+ lid domain AM481_14215 PF01434 Peptidase family M41 AM481_14215 PF00004 ATPase family associated with various cellular activities (AAA) AM481_14225 PF05166 YcgL domain AM481_14245 PF00570 HRDC domain AM481_14245 PF01612 3'-5' exonuclease AM481_14250 PF13662 Toprim domain AM481_14250 PF02132 RecR protein AM481_14255 PF02575 YbaB/EbfC DNA-binding family AM481_14265 PF01053 Cys/Met metabolism PLP-dependent enzyme AM481_14270 PF00561 alpha/beta hydrolase fold AM481_14275 PF08241 Methyltransferase domain AM481_14310 PF01230 HIT domain AM481_14345 PF00005 ABC transporter AM481_14350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM481_14360 PF02684 Lipid-A-disaccharide synthetase AM481_14365 PF07715 TonB-dependent Receptor Plug Domain AM481_14365 PF00593 TonB dependent receptor AM481_14385 PF01925 Sulfite exporter TauE/SafE AM481_14390 PF00793 DAHP synthetase I family AM481_14395 PF02654 Cobalamin-5-phosphate synthase AM481_14410 PF02277 Phosphoribosyltransferase AM481_14415 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM481_14455 PF00593 TonB dependent receptor AM481_14455 PF07715 TonB-dependent Receptor Plug Domain AM481_14470 PF06276 Ferric iron reductase FhuF-like transporter AM481_14470 PF04183 IucA / IucC family AM481_14475 PF06276 Ferric iron reductase FhuF-like transporter AM481_14475 PF04183 IucA / IucC family AM481_14480 PF07690 Major Facilitator Superfamily AM481_14485 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM481_14490 PF06276 Ferric iron reductase FhuF-like transporter AM481_14490 PF04183 IucA / IucC family AM481_14495 PF04073 Aminoacyl-tRNA editing domain AM481_14505 PF03109 ABC1 family AM481_14510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_14510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_14510 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_14515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_14515 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_14515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_14520 PF00487 Fatty acid desaturase AM481_14525 PF12833 Helix-turn-helix domain AM481_14525 PF12852 Cupin AM481_14530 PF00639 PPIC-type PPIASE domain AM481_14530 PF09312 SurA N-terminal domain AM481_14535 PF00216 Bacterial DNA-binding protein AM481_14550 PF02082 Transcriptional regulator AM481_14555 PF00266 Aminotransferase class-V AM481_14560 PF01592 NifU-like N terminal domain AM481_14565 PF01521 Iron-sulphur cluster biosynthesis AM481_14570 PF07743 HSCB C-terminal oligomerisation domain AM481_14570 PF00226 DnaJ domain AM481_14575 PF00012 Hsp70 protein AM481_14580 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_14585 PF00211 Adenylate and Guanylate cyclase catalytic domain AM481_14595 PF02559 CarD-like/TRCF domain AM481_14595 PF00271 Helicase conserved C-terminal domain AM481_14595 PF03461 TRCF domain AM481_14595 PF17757 UvrB interaction domain AM481_14595 PF00270 DEAD/DEAH box helicase AM481_14615 PF03737 Aldolase/RraA AM481_14620 PF13460 NAD(P)H-binding AM481_14625 PF01649 Ribosomal protein S20 AM481_14635 PF00459 Inositol monophosphatase family AM481_14650 PF00005 ABC transporter AM481_14650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM481_14655 PF00528 Binding-protein-dependent transport system inner membrane component AM481_14660 PF00528 Binding-protein-dependent transport system inner membrane component AM481_14665 PF01432 Peptidase family M3 AM481_14685 PF00593 TonB dependent receptor AM481_14685 PF07715 TonB-dependent Receptor Plug Domain AM481_14695 PF01618 MotA/TolQ/ExbB proton channel family AM481_14700 PF02472 Biopolymer transport protein ExbD/TolR AM481_14705 PF02472 Biopolymer transport protein ExbD/TolR AM481_14715 PF01274 Malate synthase AM481_14720 PF03969 AFG1-like ATPase AM481_14730 PF00743 Flavin-binding monooxygenase-like AM481_14740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM481_14750 PF00216 Bacterial DNA-binding protein AM481_14755 PF00575 S1 RNA binding domain AM481_14760 PF02224 Cytidylate kinase AM481_14770 PF14437 MafB19-like deaminase AM481_14780 PF03167 Uracil DNA glycosylase superfamily AM481_14790 PF03934 Type II secretion system (T2SS), protein K AM481_14795 PF07963 Prokaryotic N-terminal methylation motif AM481_14795 PF11612 Type II secretion system (T2SS), protein J AM481_14800 PF07963 Prokaryotic N-terminal methylation motif AM481_14800 PF02501 Type II secretion system (T2SS), protein I AM481_14815 PF01026 TatD related DNase AM481_14825 PF09115 DNA polymerase III, delta subunit, C terminal AM481_14830 PF02348 Cytidylyltransferase AM481_14835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM481_14840 PF00664 ABC transporter transmembrane region AM481_14840 PF00005 ABC transporter AM481_14850 PF01618 MotA/TolQ/ExbB proton channel family AM481_14855 PF17762 HTH domain found in ParB protein AM481_14855 PF02195 ParB-like nuclease domain AM481_14860 PF13614 AAA domain AM481_14865 PF02527 rRNA small subunit methyltransferase G AM481_14870 PF00483 Nucleotidyl transferase AM481_14875 PF01636 Phosphotransferase enzyme family AM481_14880 PF03968 OstA-like protein AM481_14880 PF04453 LPS transport system D AM481_14885 PF09312 SurA N-terminal domain AM481_14885 PF00639 PPIC-type PPIASE domain AM481_14890 PF01116 Fructose-bisphosphate aldolase class-II AM481_14900 PF00162 Phosphoglycerate kinase AM481_14910 PF02545 Maf-like protein AM481_14915 PF08007 Cupin superfamily protein AM481_14930 PF00375 Sodium:dicarboxylate symporter family AM481_14935 PF06912 Protein of unknown function (DUF1275) AM481_14940 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM481_14945 PF00664 ABC transporter transmembrane region AM481_14945 PF00005 ABC transporter AM481_14955 PF12833 Helix-turn-helix domain AM481_14955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM481_14960 PF01597 Glycine cleavage H-protein AM481_14965 PF02146 Sir2 family AM481_14970 PF00474 Sodium:solute symporter family AM481_14975 PF01037 Lrp/AsnC ligand binding domain AM481_14980 PF00171 Aldehyde dehydrogenase family AM481_14980 PF01619 Proline dehydrogenase AM481_14980 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM481_14980 PF14850 DNA-binding domain of Proline dehydrogenase AM481_14985 PF04229 GrpB protein AM481_14990 PF05958 tRNA (Uracil-5-)-methyltransferase AM481_15000 PF09992 Phosphodiester glycosidase AM481_15010 PF04264 YceI-like domain AM481_15020 PF00456 Transketolase, thiamine diphosphate binding domain AM481_15020 PF02780 Transketolase, C-terminal domain AM481_15020 PF02779 Transketolase, pyrimidine binding domain AM481_15025 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM481_15025 PF02772 S-adenosylmethionine synthetase, central domain AM481_15025 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM481_15050 PF00905 Penicillin binding protein transpeptidase domain AM481_15065 PF02075 Crossover junction endodeoxyribonuclease RuvC AM481_15070 PF03853 YjeF-related protein N-terminus AM481_15070 PF01256 Carbohydrate kinase AM481_15075 PF08331 Domain of unknown function (DUF1730) AM481_15080 PF06968 Biotin and Thiamin Synthesis associated domain AM481_15080 PF04055 Radical SAM superfamily AM481_15095 PF16970 Type-1 fimbrial protein, A AM481_15100 PF02753 Pili assembly chaperone PapD, C-terminal domain AM481_15100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM481_15105 PF13954 PapC N-terminal domain AM481_15105 PF13953 PapC C-terminal domain AM481_15105 PF00577 Outer membrane usher protein AM481_15130 PF00892 EamA-like transporter family AM481_15140 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM481_15150 PF03466 LysR substrate binding domain AM481_15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15170 PF00440 Bacterial regulatory proteins, tetR family AM481_15180 PF01709 Transcriptional regulator AM481_15185 PF01037 Lrp/AsnC ligand binding domain AM481_15195 PF00005 ABC transporter AM481_15200 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15205 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM481_15230 PF00296 Luciferase-like monooxygenase AM481_15235 PF03180 NLPA lipoprotein AM481_15240 PF03180 NLPA lipoprotein AM481_15245 PF00005 ABC transporter AM481_15245 PF09383 NIL domain AM481_15250 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15255 PF06071 Protein of unknown function (DUF933) AM481_15255 PF01926 50S ribosome-binding GTPase AM481_15280 PF03591 AzlC protein AM481_15285 PF05437 Branched-chain amino acid transport protein (AzlD) AM481_15295 PF02222 ATP-grasp domain AM481_15300 PF08335 GlnD PII-uridylyltransferase AM481_15300 PF01909 Nucleotidyltransferase domain AM481_15300 PF01966 HD domain AM481_15305 PF00155 Aminotransferase class I and II AM481_15315 PF12852 Cupin AM481_15315 PF12833 Helix-turn-helix domain AM481_15320 PF00255 Glutathione peroxidase AM481_15325 PF01641 SelR domain AM481_15330 PF00155 Aminotransferase class I and II AM481_15335 PF00375 Sodium:dicarboxylate symporter family AM481_15340 PF00710 Asparaginase, N-terminal AM481_15340 PF17763 Glutaminase/Asparaginase C-terminal domain AM481_15345 PF14579 Helix-hairpin-helix motif AM481_15345 PF02811 PHP domain AM481_15345 PF01336 OB-fold nucleic acid binding domain AM481_15345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM481_15345 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM481_15350 PF00588 SpoU rRNA Methylase family AM481_15355 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_15370 PF13192 Thioredoxin domain AM481_15370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_15385 PF03466 LysR substrate binding domain AM481_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15390 PF01758 Sodium Bile acid symporter family AM481_15395 PF01022 Bacterial regulatory protein, arsR family AM481_15400 PF03960 ArsC family AM481_15410 PF01979 Amidohydrolase family AM481_15410 PF13382 Adenine deaminase C-terminal domain AM481_15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15420 PF03466 LysR substrate binding domain AM481_15430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM481_15435 PF01177 Asp/Glu/Hydantoin racemase AM481_15440 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM481_15445 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15450 PF00005 ABC transporter AM481_15455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM481_15465 PF00083 Sugar (and other) transporter AM481_15470 PF00296 Luciferase-like monooxygenase AM481_15475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15475 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_15475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM481_15490 PF01654 Cytochrome bd terminal oxidase subunit I AM481_15495 PF02322 Cytochrome bd terminal oxidase subunit II AM481_15505 PF00155 Aminotransferase class I and II AM481_15505 PF00392 Bacterial regulatory proteins, gntR family AM481_15510 PF03466 LysR substrate binding domain AM481_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15525 PF00698 Acyl transferase domain AM481_15530 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM481_15540 PF01039 Carboxyl transferase domain AM481_15545 PF06857 Malonate decarboxylase delta subunit (MdcD) AM481_15550 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM481_15555 PF16957 Malonate decarboxylase, alpha subunit, transporter AM481_15560 PF07690 Major Facilitator Superfamily AM481_15575 PF00155 Aminotransferase class I and II AM481_15575 PF00392 Bacterial regulatory proteins, gntR family AM481_15580 PF04172 LrgB-like family AM481_15585 PF03788 LrgA family AM481_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15590 PF03466 LysR substrate binding domain AM481_15595 PF14834 Glutathione S-transferase, C-terminal domain AM481_15595 PF02798 Glutathione S-transferase, N-terminal domain AM481_15600 PF02798 Glutathione S-transferase, N-terminal domain AM481_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15605 PF03466 LysR substrate binding domain AM481_15615 PF00581 Rhodanese-like domain AM481_15620 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_15630 PF00266 Aminotransferase class-V AM481_15640 PF01810 LysE type translocator AM481_15645 PF03466 LysR substrate binding domain AM481_15645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15655 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM481_15660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM481_15665 PF00005 ABC transporter AM481_15670 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15675 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15690 PF00072 Response regulator receiver domain AM481_15695 PF00072 Response regulator receiver domain AM481_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM481_15695 PF09308 LuxQ, periplasmic AM481_15695 PF00512 His Kinase A (phospho-acceptor) domain AM481_15705 PF13404 AsnC-type helix-turn-helix domain AM481_15705 PF01037 Lrp/AsnC ligand binding domain AM481_15715 PF00717 Peptidase S24-like AM481_15740 PF00199 Catalase AM481_15740 PF18011 C-terminal domain found in long catalases AM481_15740 PF06628 Catalase-related immune-responsive AM481_15750 PF02464 Competence-damaged protein AM481_15750 PF00994 Probable molybdopterin binding domain AM481_15750 PF18146 Damage-inducible protein CinA KH domain AM481_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15780 PF03466 LysR substrate binding domain AM481_15800 PF13193 AMP-binding enzyme C-terminal domain AM481_15800 PF00501 AMP-binding enzyme AM481_15805 PF00440 Bacterial regulatory proteins, tetR family AM481_15810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_15810 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_15810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15815 PF01039 Carboxyl transferase domain AM481_15820 PF00378 Enoyl-CoA hydratase/isomerase AM481_15825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM481_15825 PF02785 Biotin carboxylase C-terminal domain AM481_15825 PF00364 Biotin-requiring enzyme AM481_15825 PF00289 Biotin carboxylase, N-terminal domain AM481_15830 PF00682 HMGL-like AM481_15835 PF03466 LysR substrate binding domain AM481_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_15850 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_15850 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM481_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15860 PF07690 Major Facilitator Superfamily AM481_15870 PF01144 Coenzyme A transferase AM481_15875 PF01144 Coenzyme A transferase AM481_15880 PF07690 Major Facilitator Superfamily AM481_15885 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_15885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_15885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15890 PF00378 Enoyl-CoA hydratase/isomerase AM481_15900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM481_15900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM481_15900 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM481_15905 PF02803 Thiolase, C-terminal domain AM481_15905 PF00108 Thiolase, N-terminal domain AM481_15910 PF09339 IclR helix-turn-helix domain AM481_15915 PF07690 Major Facilitator Superfamily AM481_15920 PF03060 Nitronate monooxygenase AM481_15925 PF00378 Enoyl-CoA hydratase/isomerase AM481_15930 PF09339 IclR helix-turn-helix domain AM481_15935 PF02515 CoA-transferase family III AM481_15940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM481_15940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM481_15940 PF02770 Acyl-CoA dehydrogenase, middle domain AM481_15945 PF07690 Major Facilitator Superfamily AM481_15950 PF13419 Haloacid dehalogenase-like hydrolase AM481_15955 PF00266 Aminotransferase class-V AM481_15960 PF01266 FAD dependent oxidoreductase AM481_15965 PF00528 Binding-protein-dependent transport system inner membrane component AM481_15970 PF00005 ABC transporter AM481_15970 PF08402 TOBE domain AM481_15980 PF00392 Bacterial regulatory proteins, gntR family AM481_15980 PF07702 UTRA domain AM481_15985 PF01494 FAD binding domain AM481_15990 PF09339 IclR helix-turn-helix domain AM481_15990 PF01614 Bacterial transcriptional regulator AM481_15995 PF02525 Flavodoxin-like fold AM481_16000 PF03466 LysR substrate binding domain AM481_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_16005 PF02627 Carboxymuconolactone decarboxylase family AM481_16010 PF00171 Aldehyde dehydrogenase family AM481_16020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM481_16030 PF00171 Aldehyde dehydrogenase family AM481_16035 PF00296 Luciferase-like monooxygenase AM481_16040 PF01613 Flavin reductase like domain AM481_16045 PF12697 Alpha/beta hydrolase family AM481_16065 PF01292 Prokaryotic cytochrome b561 AM481_16070 PF00199 Catalase AM481_16110 PF03061 Thioesterase superfamily AM481_16115 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_16120 PF07848 PaaX-like protein AM481_16120 PF08223 PaaX-like protein C-terminal domain AM481_16125 PF00501 AMP-binding enzyme AM481_16125 PF14535 AMP-binding enzyme C-terminal domain AM481_16130 PF02803 Thiolase, C-terminal domain AM481_16130 PF00108 Thiolase, N-terminal domain AM481_16135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM481_16135 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM481_16135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM481_16140 PF00378 Enoyl-CoA hydratase/isomerase AM481_16145 PF00378 Enoyl-CoA hydratase/isomerase AM481_16150 PF00970 Oxidoreductase FAD-binding domain AM481_16150 PF00175 Oxidoreductase NAD-binding domain AM481_16150 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_16155 PF01883 Iron-sulfur cluster assembly protein AM481_16160 PF05138 Phenylacetic acid catabolic protein AM481_16165 PF06243 Phenylacetic acid degradation B AM481_16170 PF05138 Phenylacetic acid catabolic protein AM481_16175 PF01575 MaoC like domain AM481_16175 PF00171 Aldehyde dehydrogenase family AM481_16180 PF03313 Serine dehydratase alpha chain AM481_16180 PF03315 Serine dehydratase beta chain AM481_16185 PF13520 Amino acid permease AM481_16190 PF00171 Aldehyde dehydrogenase family AM481_16195 PF00083 Sugar (and other) transporter AM481_16205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_16205 PF04324 BFD-like [2Fe-2S] binding domain AM481_16215 PF01266 FAD dependent oxidoreductase AM481_16220 PF05544 Proline racemase AM481_16225 PF00392 Bacterial regulatory proteins, gntR family AM481_16235 PF00701 Dihydrodipicolinate synthetase family AM481_16250 PF00376 MerR family regulatory protein AM481_16250 PF09278 MerR, DNA binding AM481_16280 PF00654 Voltage gated chloride channel AM481_16285 PF02785 Biotin carboxylase C-terminal domain AM481_16285 PF00364 Biotin-requiring enzyme AM481_16285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM481_16285 PF00289 Biotin carboxylase, N-terminal domain AM481_16295 PF07286 Protein of unknown function (DUF1445) AM481_16300 PF03746 LamB/YcsF family AM481_16305 PF01566 Natural resistance-associated macrophage protein AM481_16310 PF03466 LysR substrate binding domain AM481_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_16340 PF04717 Type VI secretion system, phage-baseplate injector AM481_16340 PF16671 Actin cross-linking domain AM481_16355 PF13419 Haloacid dehalogenase-like hydrolase AM481_16375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM481_16375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM481_16395 PF07690 Major Facilitator Superfamily AM481_16405 PF03279 Bacterial lipid A biosynthesis acyltransferase AM481_16410 PF00563 EAL domain AM481_16410 PF03707 Bacterial signalling protein N terminal repeat AM481_16410 PF00990 Diguanylate cyclase, GGDEF domain AM481_16415 PF00892 EamA-like transporter family AM481_16420 PF01037 Lrp/AsnC ligand binding domain AM481_16425 PF05190 MutS family domain IV AM481_16425 PF00488 MutS domain V AM481_16425 PF05188 MutS domain II AM481_16425 PF05192 MutS domain III AM481_16425 PF01624 MutS domain I AM481_16435 PF11953 Domain of unknown function (DUF3470) AM481_16435 PF00037 4Fe-4S binding domain AM481_16445 PF01596 O-methyltransferase AM481_16455 PF00132 Bacterial transferase hexapeptide (six repeats) AM481_16460 PF01205 Uncharacterized protein family UPF0029 AM481_16470 PF00005 ABC transporter AM481_16470 PF00664 ABC transporter transmembrane region AM481_16470 PF03412 Peptidase C39 family AM481_16475 PF02321 Outer membrane efflux protein AM481_16480 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM481_16480 PF00005 ABC transporter AM481_16485 PF03968 OstA-like protein AM481_16500 PF01380 SIS domain AM481_16500 PF00571 CBS domain AM481_16505 PF09190 DALR domain AM481_16505 PF01406 tRNA synthetases class I (C) catalytic domain AM481_16535 PF01638 HxlR-like helix-turn-helix AM481_16540 PF07690 Major Facilitator Superfamily AM481_16570 PF03807 NADP oxidoreductase coenzyme F420-dependent AM481_16570 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM481_16585 PF00313 'Cold-shock' DNA-binding domain AM481_16590 PF01810 LysE type translocator AM481_16625 PF02601 Exonuclease VII, large subunit AM481_16625 PF13742 OB-fold nucleic acid binding domain AM481_16665 PF00376 MerR family regulatory protein AM481_16665 PF09278 MerR, DNA binding AM481_16670 PF00403 Heavy-metal-associated domain AM481_16675 PF00403 Heavy-metal-associated domain AM481_16680 PF03466 LysR substrate binding domain AM481_16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_16685 PF00355 Rieske [2Fe-2S] domain AM481_16685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM481_16690 PF00866 Ring hydroxylating beta subunit AM481_16695 PF00970 Oxidoreductase FAD-binding domain AM481_16695 PF00175 Oxidoreductase NAD-binding domain AM481_16695 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_16700 PF00106 short chain dehydrogenase AM481_16705 PF03594 Benzoate membrane transport protein AM481_16710 PF07690 Major Facilitator Superfamily AM481_16720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM481_16720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM481_16725 PF00271 Helicase conserved C-terminal domain AM481_16725 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM481_16725 PF00270 DEAD/DEAH box helicase AM481_16725 PF11898 Domain of unknown function (DUF3418) AM481_16725 PF04408 Helicase associated domain (HA2) AM481_16730 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM481_16730 PF00578 AhpC/TSA family AM481_16750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_16750 PF13192 Thioredoxin domain AM481_16760 PF02798 Glutathione S-transferase, N-terminal domain AM481_16760 PF00043 Glutathione S-transferase, C-terminal domain AM481_16770 PF02390 Putative methyltransferase AM481_16775 PF13417 Glutathione S-transferase, N-terminal domain AM481_16775 PF00043 Glutathione S-transferase, C-terminal domain AM481_16785 PF00691 OmpA family AM481_16785 PF13488 Glycine zipper AM481_16790 PF01979 Amidohydrolase family AM481_16795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM481_16795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM481_16805 PF01170 Putative RNA methylase family UPF0020 AM481_16805 PF10672 S-adenosylmethionine-dependent methyltransferase AM481_16805 PF02926 THUMP domain AM481_16820 PF10431 C-terminal, D2-small domain, of ClpB protein AM481_16820 PF02861 Clp amino terminal domain, pathogenicity island component AM481_16820 PF00004 ATPase family associated with various cellular activities (AAA) AM481_16820 PF07724 AAA domain (Cdc48 subfamily) AM481_16820 PF17871 AAA lid domain AM481_16840 PF02566 OsmC-like protein AM481_16845 PF00027 Cyclic nucleotide-binding domain AM481_16845 PF13545 Crp-like helix-turn-helix domain AM481_16855 PF00248 Aldo/keto reductase family AM481_16870 PF00709 Adenylosuccinate synthetase AM481_16875 PF13393 Histidyl-tRNA synthetase AM481_16880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM481_16880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM481_16885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM481_16885 PF01411 tRNA synthetases class II (A) AM481_16885 PF02272 DHHA1 domain AM481_16890 PF13840 ACT domain AM481_16890 PF00696 Amino acid kinase family AM481_16890 PF01842 ACT domain AM481_16895 PF02599 Global regulator protein family AM481_16900 PF01351 Ribonuclease HII AM481_16910 PF01292 Prokaryotic cytochrome b561 AM481_16915 PF00962 Adenosine/AMP deaminase AM481_16920 PF00860 Permease family AM481_16930 PF00743 Flavin-binding monooxygenase-like AM481_16935 PF00106 short chain dehydrogenase AM481_16945 PF17954 Quercetinase C-terminal cupin domain AM481_16945 PF02678 Pirin AM481_16950 PF17932 Tetracyclin repressor-like, C-terminal domain AM481_16950 PF00440 Bacterial regulatory proteins, tetR family AM481_16960 PF00106 short chain dehydrogenase AM481_16975 PF13610 DDE domain AM481_16980 PF00324 Amino acid permease AM481_16985 PF04958 Arginine N-succinyltransferase beta subunit AM481_16990 PF00202 Aminotransferase class-III AM481_17000 PF00171 Aldehyde dehydrogenase family AM481_17010 PF00392 Bacterial regulatory proteins, gntR family AM481_17010 PF07729 FCD domain AM481_17020 PF00324 Amino acid permease AM481_17025 PF01266 FAD dependent oxidoreductase AM481_17030 PF00324 Amino acid permease AM481_17075 PF05593 RHS Repeat AM481_17075 PF03527 RHS protein AM481_17080 PF04717 Type VI secretion system, phage-baseplate injector AM481_17080 PF16671 Actin cross-linking domain AM481_17100 PF03180 NLPA lipoprotein AM481_17105 PF05987 Bacterial protein of unknown function (DUF898) AM481_17120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_17125 PF00764 Arginosuccinate synthase AM481_17130 PF00360 Phytochrome region AM481_17130 PF00990 Diguanylate cyclase, GGDEF domain AM481_17130 PF01590 GAF domain AM481_17130 PF00563 EAL domain AM481_17135 PF01979 Amidohydrolase family AM481_17140 PF00929 Exonuclease AM481_17150 PF07715 TonB-dependent Receptor Plug Domain AM481_17150 PF00593 TonB dependent receptor AM481_17155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM481_17155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_17160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM481_17160 PF00005 ABC transporter AM481_17165 PF12911 N-terminal TM domain of oligopeptide transport permease C AM481_17165 PF00528 Binding-protein-dependent transport system inner membrane component AM481_17170 PF00528 Binding-protein-dependent transport system inner membrane component AM481_17175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM481_17180 PF01464 Transglycosylase SLT domain AM481_17180 PF01464 Transglycosylase SLT domain AM481_17180 PF01476 LysM domain AM481_17180 PF01476 LysM domain AM481_17185 PF00929 Exonuclease AM481_17195 PF00293 NUDIX domain AM481_17195 PF09297 NADH pyrophosphatase zinc ribbon domain AM481_17205 PF04972 BON domain AM481_17210 PF02021 Uncharacterised protein family UPF0102 AM481_17215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM481_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_17225 PF03466 LysR substrate binding domain AM481_17230 PF01810 LysE type translocator AM481_17240 PF13411 MerR HTH family regulatory protein AM481_17250 PF01494 FAD binding domain AM481_17255 PF01494 FAD binding domain AM481_17260 PF00557 Metallopeptidase family M24 AM481_17260 PF05195 Aminopeptidase P, N-terminal domain AM481_17295 PF00884 Sulfatase AM481_17295 PF08019 Phosphoethanolamine transferase EptA/EptB AM481_17340 PF01551 Peptidase family M23 AM481_17340 PF08525 Opacity-associated protein A N-terminal motif AM481_17340 PF01476 LysM domain AM481_17665 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM481_17675 PF05662 Coiled stalk of trimeric autotransporter adhesin AM481_17675 PF05658 Head domain of trimeric autotransporter adhesin AM481_17675 PF03895 YadA-like membrane anchor domain AM481_17675 PF13018 Extended Signal Peptide of Type V secretion system AM481_17680 PF05362 Lon protease (S16) C-terminal proteolytic domain AM481_17680 PF00004 ATPase family associated with various cellular activities (AAA) AM481_17680 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM481_17685 PF02590 Predicted SPOUT methyltransferase AM481_17690 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM481_17700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM481_17700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM481_17705 PF04060 Putative Fe-S cluster AM481_17710 PF00633 Helix-hairpin-helix motif AM481_17710 PF10576 Iron-sulfur binding domain of endonuclease III AM481_17710 PF00730 HhH-GPD superfamily base excision DNA repair protein AM481_17720 PF05191 Adenylate kinase, active site lid AM481_17735 PF03717 Penicillin-binding Protein dimerisation domain AM481_17735 PF00905 Penicillin binding protein transpeptidase domain AM481_17750 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM481_17755 PF01730 UreF AM481_17760 PF02814 UreE urease accessory protein, N-terminal domain AM481_17760 PF05194 UreE urease accessory protein, C-terminal domain AM481_17765 PF01979 Amidohydrolase family AM481_17765 PF00449 Urease alpha-subunit, N-terminal domain AM481_17770 PF00699 Urease beta subunit AM481_17775 PF00547 Urease, gamma subunit AM481_17780 PF01774 UreD urease accessory protein AM481_17795 PF00463 Isocitrate lyase family AM481_17800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_17800 PF03466 LysR substrate binding domain AM481_17805 PF03471 Transporter associated domain AM481_17805 PF00571 CBS domain AM481_17805 PF01595 Cyclin M transmembrane N-terminal domain AM481_17815 PF03600 Citrate transporter AM481_17830 PF00009 Elongation factor Tu GTP binding domain AM481_17835 PF01507 Phosphoadenosine phosphosulfate reductase family AM481_17845 PF14052 Capsule assembly protein Wzi AM481_17850 PF00152 tRNA synthetases class II (D, K and N) AM481_17850 PF01336 OB-fold nucleic acid binding domain AM481_17865 PF00301 Rubredoxin AM481_17870 PF18113 Rubredoxin binding C-terminal domain AM481_17870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_17875 PF00561 alpha/beta hydrolase fold AM481_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_17880 PF03466 LysR substrate binding domain AM481_17890 PF02503 Polyphosphate kinase middle domain AM481_17890 PF13090 Polyphosphate kinase C-terminal domain 2 AM481_17890 PF17941 Polyphosphate kinase C-terminal domain 1 AM481_17890 PF13089 Polyphosphate kinase N-terminal domain AM481_17895 PF00912 Transglycosylase AM481_17900 PF01694 Rhomboid family AM481_17910 PF00005 ABC transporter AM481_17915 PF13472 GDSL-like Lipase/Acylhydrolase family AM481_17920 PF00484 Carbonic anhydrase AM481_17925 PF00561 alpha/beta hydrolase fold AM481_17935 PF07715 TonB-dependent Receptor Plug Domain AM481_17935 PF00593 TonB dependent receptor AM481_17940 PF01521 Iron-sulphur cluster biosynthesis AM481_17940 PF01106 NifU-like domain AM481_17950 PF00884 Sulfatase AM481_17955 PF03781 Sulfatase-modifying factor enzyme 1 AM481_17970 PF00291 Pyridoxal-phosphate dependent enzyme AM481_17975 PF01384 Phosphate transporter family AM481_17980 PF02310 B12 binding domain AM481_17980 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM481_17980 PF00809 Pterin binding enzyme AM481_17980 PF02574 Homocysteine S-methyltransferase AM481_17980 PF02607 B12 binding domain AM481_17985 PF02779 Transketolase, pyrimidine binding domain AM481_17985 PF02780 Transketolase, C-terminal domain AM481_17990 PF00456 Transketolase, thiamine diphosphate binding domain AM481_17995 PF07690 Major Facilitator Superfamily AM481_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_18005 PF03466 LysR substrate binding domain AM481_18020 PF01263 Aldose 1-epimerase AM481_18025 PF07690 Major Facilitator Superfamily AM481_18030 PF12833 Helix-turn-helix domain AM481_18030 PF02311 AraC-like ligand binding domain AM481_18035 PF04960 Glutaminase AM481_18040 PF01327 Polypeptide deformylase AM481_18045 PF07690 Major Facilitator Superfamily AM481_18055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM481_18055 PF00205 Thiamine pyrophosphate enzyme, central domain AM481_18055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM481_18060 PF00171 Aldehyde dehydrogenase family AM481_18065 PF03447 Homoserine dehydrogenase, NAD binding domain AM481_18065 PF01958 Domain of unknown function DUF108 AM481_18075 PF12697 Alpha/beta hydrolase family AM481_18085 PF07690 Major Facilitator Superfamily AM481_18090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_18090 PF14759 Reductase C-terminal AM481_18095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM481_18105 PF00355 Rieske [2Fe-2S] domain AM481_18115 PF00355 Rieske [2Fe-2S] domain AM481_18125 PF01614 Bacterial transcriptional regulator AM481_18125 PF09339 IclR helix-turn-helix domain AM481_18140 PF00378 Enoyl-CoA hydratase/isomerase AM481_18150 PF00535 Glycosyl transferase family 2 AM481_18155 PF14883 Hypothetical glycosyl hydrolase family 13 AM481_18155 PF01522 Polysaccharide deacetylase AM481_18160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM481_18165 PF07152 YaeQ protein AM481_18170 PF00375 Sodium:dicarboxylate symporter family AM481_18175 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM481_18175 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM481_18185 PF03061 Thioesterase superfamily AM481_18195 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_18200 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_18205 PF13977 BetI-type transcriptional repressor, C-terminal AM481_18205 PF00440 Bacterial regulatory proteins, tetR family AM481_18210 PF00171 Aldehyde dehydrogenase family AM481_18215 PF05199 GMC oxidoreductase AM481_18215 PF00732 GMC oxidoreductase AM481_18220 PF06039 Malate:quinone oxidoreductase (Mqo) AM481_18230 PF02574 Homocysteine S-methyltransferase AM481_18235 PF13520 Amino acid permease AM481_18260 PF00701 Dihydrodipicolinate synthetase family AM481_18265 PF00083 Sugar (and other) transporter AM481_18385 PF00712 DNA polymerase III beta subunit, N-terminal domain AM481_18385 PF02767 DNA polymerase III beta subunit, central domain AM481_18385 PF02768 DNA polymerase III beta subunit, C-terminal domain AM481_18425 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM481_18575 PF07007 Lysozyme inhibitor LprI AM481_18620 PF01695 IstB-like ATP binding protein AM481_18630 PF00145 C-5 cytosine-specific DNA methylase AM481_18675 PF01381 Helix-turn-helix AM481_18675 PF00717 Peptidase S24-like AM481_18710 PF00929 Exonuclease AM481_18780 PF07690 Major Facilitator Superfamily AM481_18785 PF13533 Biotin-lipoyl like AM481_18790 PF03061 Thioesterase superfamily AM481_18795 PF00490 Delta-aminolevulinic acid dehydratase AM481_18800 PF01266 FAD dependent oxidoreductase AM481_18805 PF01370 NAD dependent epimerase/dehydratase family AM481_18805 PF08338 Domain of unknown function (DUF1731) AM481_18825 PF00149 Calcineurin-like phosphoesterase AM481_18825 PF12320 Type 5 capsule protein repressor C-terminal domain AM481_18835 PF01168 Alanine racemase, N-terminal domain AM481_18840 PF00437 Type II/IV secretion system protein AM481_18845 PF00437 Type II/IV secretion system protein AM481_18850 PF01475 Ferric uptake regulator family AM481_18855 PF04355 SmpA / OmlA family AM481_18860 PF03658 RnfH family Ubiquitin AM481_18875 PF01814 Hemerythrin HHE cation binding domain AM481_18880 PF13230 Glutamine amidotransferases class-II AM481_18890 PF00696 Amino acid kinase family AM481_18895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM481_18895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM481_18895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM481_18895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM481_18900 PF00692 dUTPase AM481_18905 PF00580 UvrD/REP helicase N-terminal domain AM481_18905 PF13361 UvrD-like helicase C-terminal domain AM481_18910 PF13488 Glycine zipper AM481_18910 PF00691 OmpA family AM481_18915 PF01553 Acyltransferase AM481_18925 PF03775 Septum formation inhibitor MinC, C-terminal domain AM481_18930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM481_18935 PF03776 Septum formation topological specificity factor MinE AM481_18950 PF01810 LysE type translocator AM481_18955 PF17854 FtsK alpha domain AM481_18955 PF09397 Ftsk gamma domain AM481_18955 PF01580 FtsK/SpoIIIE family AM481_18955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM481_18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM481_18965 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM481_18970 PF04377 Arginine-tRNA-protein transferase, C terminus AM481_18970 PF04376 Arginine-tRNA-protein transferase, N terminus AM481_18975 PF00583 Acetyltransferase (GNAT) family AM481_18990 PF00009 Elongation factor Tu GTP binding domain AM481_18990 PF03144 Elongation factor Tu domain 2 AM481_18990 PF03143 Elongation factor Tu C-terminal domain AM481_18995 PF03144 Elongation factor Tu domain 2 AM481_18995 PF14492 Elongation Factor G, domain II AM481_18995 PF03764 Elongation factor G, domain IV AM481_18995 PF00679 Elongation factor G C-terminus AM481_18995 PF00009 Elongation factor Tu GTP binding domain AM481_19000 PF00177 Ribosomal protein S7p/S5e AM481_19005 PF00164 Ribosomal protein S12/S23 AM481_19015 PF02801 Beta-ketoacyl synthase, C-terminal domain AM481_19015 PF00109 Beta-ketoacyl synthase, N-terminal domain AM481_19025 PF05726 Pirin C-terminal cupin domain AM481_19025 PF02678 Pirin AM481_19035 PF02540 NAD synthase AM481_19035 PF00795 Carbon-nitrogen hydrolase AM481_19050 PF00111 2Fe-2S iron-sulfur cluster binding domain AM481_19050 PF00970 Oxidoreductase FAD-binding domain AM481_19050 PF00175 Oxidoreductase NAD-binding domain AM481_19055 PF00171 Aldehyde dehydrogenase family AM481_19060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM481_19060 PF00355 Rieske [2Fe-2S] domain AM481_19065 PF07859 alpha/beta hydrolase fold AM481_19070 PF02028 BCCT, betaine/carnitine/choline family transporter AM481_19075 PF00180 Isocitrate/isopropylmalate dehydrogenase AM481_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM481_19080 PF03466 LysR substrate binding domain AM481_19100 PF00037 4Fe-4S binding domain AM481_19105 PF01467 Cytidylyltransferase-like AM481_19110 PF01668 SmpB protein AM481_19115 PF03358 NADPH-dependent FMN reductase AM481_19125 PF00849 RNA pseudouridylate synthase AM481_19125 PF01479 S4 domain AM481_19130 PF13525 Outer membrane lipoprotein AM481_19150 PF08275 DNA primase catalytic core, N-terminal domain AM481_19150 PF01807 CHC2 zinc finger AM481_19150 PF10410 DnaB-helicase binding domain of primase AM481_19190 PF00625 Guanylate kinase AM481_19215 PF02899 Phage integrase, N-terminal SAM-like domain AM481_19215 PF00589 Phage integrase family AM481_19250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM481_19250 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM481_19250 PF14579 Helix-hairpin-helix motif AM481_19250 PF02811 PHP domain AM481_19270 PF00154 recA bacterial DNA recombination protein AM481_19315 PF13476 AAA domain AM481_19340 PF00317 Ribonucleotide reductase, all-alpha domain AM481_19340 PF03477 ATP cone domain AM481_19340 PF02867 Ribonucleotide reductase, barrel domain AM481_19345 PF00268 Ribonucleotide reductase, small chain AM481_19370 PF00692 dUTPase AM481_19470 PF00929 Exonuclease AM481_19615 PF02195 ParB-like nuclease domain AM481_19620 PF09383 NIL domain AM481_19620 PF00005 ABC transporter AM481_19730 PF00877 NlpC/P60 family AM481_19790 PF07715 TonB-dependent Receptor Plug Domain AM481_19790 PF00593 TonB dependent receptor