AM481_00005 SM00400 zinc finger AM481_00015 SM00028 Tetratricopeptide repeats AM481_00050 SM01400 AM481_00050 AM481_00095 SM00257 Lysin motif AM481_00105 SM00822 AM481_00105 AM481_00110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM481_00145 SM00363 S4 RNA-binding domain AM481_00195 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM481_00195 SM00292 breast cancer carboxy-terminal domain AM481_00195 SM00532 Ligase N family AM481_00200 SM00771 ZipA, C-terminal domain (FtsZ-binding) AM481_00210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_00230 SM00382 ATPases associated with a variety of cellular activities AM481_00230 SM00962 SRP54-type protein, GTPase domain AM481_00230 SM00963 SRP54-type protein, helical bundle domain AM481_00380 SM00357 Cold shock protein domain AM481_00425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM481_00425 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM481_00430 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM481_00455 SM00267 diguanylate cyclase AM481_00465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM481_00465 SM00387 Histidine kinase-like ATPases AM481_00465 SM00388 His Kinase A (phosphoacceptor) domain AM481_00470 SM00448 cheY-homologous receiver domain AM481_00470 SM00862 Transcriptional regulatory protein, C terminal AM481_00500 SM00387 Histidine kinase-like ATPases AM481_00570 SM00564 beta-propeller repeat AM481_00620 SM00903 Flavin reductase like domain AM481_00650 SM00342 helix_turn_helix, arabinose operon control protein AM481_00940 SM00331 Sigma factor PP2C-like phosphatases AM481_00960 SM00347 helix_turn_helix multiple antibiotic resistance protein AM481_00970 SM00382 ATPases associated with a variety of cellular activities AM481_00990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM481_00990 SM00474 3'-5' exonuclease AM481_00990 SM00475 5'-3' exonuclease AM481_00990 SM00482 DNA polymerase A domain AM481_01005 SM00977 TilS substrate C-terminal domain AM481_01025 SM00357 Cold shock protein domain AM481_01025 SM00382 ATPases associated with a variety of cellular activities AM481_01025 SM00959 Rho termination factor, N-terminal domain AM481_01040 SM00411 bacterial (prokaryotic) histone like domain AM481_01045 SM00873 B3/4 domain AM481_01045 SM00874 tRNA synthetase B5 domain AM481_01045 SM00896 Ferredoxin-fold anticodon binding domain AM481_01105 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM481_01150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM481_01165 SM00954 Region found in RelA / SpoT proteins AM481_01185 SM00073 Histidine Phosphotransfer domain AM481_01185 SM00387 Histidine kinase-like ATPases AM481_01185 SM00388 His Kinase A (phosphoacceptor) domain AM481_01185 SM00448 cheY-homologous receiver domain AM481_01225 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AM481_01225 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AM481_01300 SM01236 AM481_01300 AM481_01320 SM00052 Putative diguanylate phosphodiesterase AM481_01320 SM00267 diguanylate cyclase AM481_01365 SM00382 ATPases associated with a variety of cellular activities AM481_01385 SM00479 AM481_01385 AM481_01395 SM00450 Rhodanese Homology Domain AM481_01420 SM00825 Beta-ketoacyl synthase AM481_01425 SM00822 AM481_01425 AM481_01435 SM00825 Beta-ketoacyl synthase AM481_01500 SM00563 Phosphate acyltransferases AM481_01515 SM00564 beta-propeller repeat AM481_01540 SM00028 Tetratricopeptide repeats AM481_01550 SM00562 AM481_01550 AM481_01560 SM00014 Acid phosphatase homologues AM481_01570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM481_01570 SM00245 tail specific protease AM481_01645 SM00382 ATPases associated with a variety of cellular activities AM481_01645 SM00994 ClpX C4-type zinc finger AM481_01645 SM01086 C-terminal, D2-small domain, of ClpB protein AM481_01665 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AM481_01670 SM00917 LeuA allosteric (dimerisation) domain AM481_01685 SM00671 Sel1-like repeats. AM481_01825 SM00360 RNA recognition motif AM481_01845 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM481_01845 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM481_01845 SM00493 AM481_01845 AM481_01860 SM00829 Enoylreductase AM481_01870 SM00382 ATPases associated with a variety of cellular activities AM481_01900 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM481_01915 SM00870 AM481_01915 AM481_01925 SM00342 helix_turn_helix, arabinose operon control protein AM481_01930 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_01945 SM01329 AM481_01945 AM481_01995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM481_02035 SM00363 S4 RNA-binding domain AM481_02045 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_02075 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_02145 SM00849 Metallo-beta-lactamase superfamily AM481_02180 SM00116 Domain in cystathionine beta-synthase and other proteins. AM481_02180 SM01091 Transporter associated domain AM481_02210 SM00487 DEAD-like helicases superfamily AM481_02210 SM00490 helicase superfamily c-terminal domain AM481_02230 SM00271 DnaJ molecular chaperone homology domain AM481_02245 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_02245 SM00322 K homology RNA-binding domain AM481_02250 SM01387 AM481_02250 AM481_02260 SM00382 ATPases associated with a variety of cellular activities AM481_02365 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_02425 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM481_02450 SM00732 Likely ribonuclease with RNase H fold. AM481_02470 SM00346 helix_turn_helix isocitrate lyase regulation AM481_02480 SM00342 helix_turn_helix, arabinose operon control protein AM481_02495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM481_02495 SM00465 GIY-YIG type nucleases (URI domain) AM481_02545 SM00422 helix_turn_helix, mercury resistance AM481_02570 SM00387 Histidine kinase-like ATPases AM481_02610 SM00663 RNA polymerase I subunit A N-terminus AM481_02635 SM00649 Ribosomal protein L11/L12 AM481_02640 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM481_02640 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM481_02690 SM00240 Forkhead associated domain AM481_02700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM481_02710 SM00528 Domain in histone-like proteins of HNS family AM481_02740 SM00448 cheY-homologous receiver domain AM481_02740 SM00850 LytTr DNA-binding domain AM481_02830 SM00899 AM481_02830 AM481_02860 SM00421 helix_turn_helix, Lux Regulon AM481_02860 SM00448 cheY-homologous receiver domain AM481_02865 SM00387 Histidine kinase-like ATPases AM481_02865 SM00388 His Kinase A (phosphoacceptor) domain AM481_02870 SM00382 ATPases associated with a variety of cellular activities AM481_02870 SM00448 cheY-homologous receiver domain AM481_02875 SM00245 tail specific protease AM481_02940 SM00938 Nitrogen regulatory protein P-II AM481_03025 SM00382 ATPases associated with a variety of cellular activities AM481_03045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_03050 SM01007 Class II Aldolase and Adducin N-terminal domain AM481_03055 SM01130 AM481_03055 AM481_03090 SM00434 DNA Topoisomerase IV AM481_03110 SM01091 Transporter associated domain AM481_03125 SM00641 Glycosyl hydrolases family 25 AM481_03145 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_03155 SM00422 helix_turn_helix, mercury resistance AM481_03270 SM00342 helix_turn_helix, arabinose operon control protein AM481_03290 SM00382 ATPases associated with a variety of cellular activities AM481_03340 SM00382 ATPases associated with a variety of cellular activities AM481_03365 SM00919 Malic enzyme, NAD binding domain AM481_03365 SM01274 AM481_03365 AM481_03370 SM00836 DALR anticodon binding domain AM481_03370 SM01016 Arginyl tRNA synthetase N terminal dom AM481_03490 SM00823 Phosphopantetheine attachment site AM481_03490 SM01294 AM481_03490 AM481_03505 SM00421 helix_turn_helix, Lux Regulon AM481_03575 SM01005 Alanine racemase, C-terminal domain AM481_03585 SM00344 helix_turn_helix ASNC type AM481_03690 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_03690 SM00895 AM481_03690 AM481_03715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_03715 SM00895 AM481_03715 AM481_03740 SM00984 UDP binding domain AM481_03785 SM00858 AM481_03785 AM481_03815 SM00984 UDP binding domain AM481_03825 SM00226 Low molecular weight phosphatase family AM481_03850 SM00644 AM481_03850 AM481_03935 SM00062 Bacterial periplasmic substrate-binding proteins AM481_03940 SM00062 Bacterial periplasmic substrate-binding proteins AM481_03955 SM00382 ATPases associated with a variety of cellular activities AM481_03975 SM00904 Riboflavin kinase AM481_04000 SM00248 ankyrin repeats AM481_04050 SM00849 Metallo-beta-lactamase superfamily AM481_04070 SM00235 Zinc-dependent metalloprotease AM481_04075 SM00235 Zinc-dependent metalloprotease AM481_04095 SM01001 AIR carboxylase AM481_04120 SM00014 Acid phosphatase homologues AM481_04185 SM01234 AM481_04185 AM481_04200 SM00382 ATPases associated with a variety of cellular activities AM481_04200 SM00760 Bacterial dnaA protein helix-turn-helix domain AM481_04205 SM00480 DNA polymerase III beta subunit AM481_04215 SM00387 Histidine kinase-like ATPases AM481_04215 SM00433 TopoisomeraseII AM481_04230 SM00382 ATPases associated with a variety of cellular activities AM481_04380 SM00271 DnaJ molecular chaperone homology domain AM481_04425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_04430 SM00829 Enoylreductase AM481_04450 SM00478 endonuclease III AM481_04450 SM00525 AM481_04450 AM481_04480 SM00382 ATPases associated with a variety of cellular activities AM481_04505 SM01130 AM481_04505 AM481_04535 SM00346 helix_turn_helix isocitrate lyase regulation AM481_04565 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM481_04575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_04575 SM00866 AM481_04575 AM481_04695 SM00450 Rhodanese Homology Domain AM481_04725 SM00387 Histidine kinase-like ATPases AM481_04725 SM00388 His Kinase A (phosphoacceptor) domain AM481_04730 SM00448 cheY-homologous receiver domain AM481_04730 SM00862 Transcriptional regulatory protein, C terminal AM481_04785 SM00257 Lysin motif AM481_04810 SM00387 Histidine kinase-like ATPases AM481_04810 SM00433 TopoisomeraseII AM481_04880 SM00267 diguanylate cyclase AM481_04955 SM00842 Cell division protein FtsA AM481_04960 SM00864 Tubulin/FtsZ family, GTPase domain AM481_04960 SM00865 Tubulin/FtsZ family, C-terminal domain AM481_05015 SM00849 Metallo-beta-lactamase superfamily AM481_05025 SM00116 Domain in cystathionine beta-synthase and other proteins. AM481_05025 SM01240 AM481_05025 AM481_05055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM481_05095 SM00344 helix_turn_helix ASNC type AM481_05115 SM00421 helix_turn_helix, Lux Regulon AM481_05115 SM00448 cheY-homologous receiver domain AM481_05125 SM00387 Histidine kinase-like ATPases AM481_05125 SM00388 His Kinase A (phosphoacceptor) domain AM481_05125 SM00448 cheY-homologous receiver domain AM481_05155 SM00267 diguanylate cyclase AM481_05175 SM00829 Enoylreductase AM481_05220 SM00530 Helix-turn-helix XRE-family like proteins AM481_05230 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_05310 SM00342 helix_turn_helix, arabinose operon control protein AM481_05325 SM00671 Sel1-like repeats. AM481_05380 SM00477 DNA/RNA non-specific endonuclease AM481_05380 SM00892 DNA/RNA non-specific endonuclease AM481_05400 SM00342 helix_turn_helix, arabinose operon control protein AM481_05420 SM00357 Cold shock protein domain AM481_05440 SM00530 Helix-turn-helix XRE-family like proteins AM481_05450 SM00474 3'-5' exonuclease AM481_05500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM481_05500 SM00387 Histidine kinase-like ATPases AM481_05500 SM00388 His Kinase A (phosphoacceptor) domain AM481_05505 SM00448 cheY-homologous receiver domain AM481_05505 SM00862 Transcriptional regulatory protein, C terminal AM481_05510 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_05510 SM00732 Likely ribonuclease with RNase H fold. AM481_05515 SM00947 Carbonic anhydrase AM481_05530 SM00382 ATPases associated with a variety of cellular activities AM481_05535 SM00671 Sel1-like repeats. AM481_05690 SM00842 Cell division protein FtsA AM481_05710 SM00965 Secretin and TonB N terminus short domain AM481_05790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM481_05790 SM00954 Region found in RelA / SpoT proteins AM481_05800 SM01409 AM481_05800 AM481_05805 SM00072 Guanylate kinase homologues. AM481_05990 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM481_06090 SM00116 Domain in cystathionine beta-synthase and other proteins. AM481_06130 SM00861 Transketolase, pyrimidine binding domain AM481_06140 SM00487 DEAD-like helicases superfamily AM481_06140 SM00490 helicase superfamily c-terminal domain AM481_06145 SM00382 ATPases associated with a variety of cellular activities AM481_06190 SM00487 DEAD-like helicases superfamily AM481_06190 SM00490 helicase superfamily c-terminal domain AM481_06205 SM00563 Phosphate acyltransferases AM481_06255 SM01403 AM481_06255 AM481_06275 SM01382 AM481_06275 AM481_06275 SM01383 AM481_06275 AM481_06290 SM00322 K homology RNA-binding domain AM481_06310 SM01374 AM481_06310 AM481_06315 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM481_06380 SM00363 S4 RNA-binding domain AM481_06380 SM01390 AM481_06380 AM481_06385 SM00662 RNA polymerases D AM481_06445 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_06445 SM00955 AM481_06445 AM481_06500 SM00342 helix_turn_helix, arabinose operon control protein AM481_06550 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_06580 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AM481_06670 SM00878 Biotin carboxylase C-terminal domain AM481_06705 SM00650 Ribosomal RNA adenine dimethylases AM481_06735 SM00563 Phosphate acyltransferases AM481_06740 SM00155 Phospholipase D. Active site motifs. AM481_06755 SM00267 diguanylate cyclase AM481_06830 SM00450 Rhodanese Homology Domain AM481_06855 SM00481 DNA polymerase alpha chain like domain AM481_06885 SM01323 AM481_06885 AM481_06935 SM00387 Histidine kinase-like ATPases AM481_06935 SM00388 His Kinase A (phosphoacceptor) domain AM481_07060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM481_07060 SM00387 Histidine kinase-like ATPases AM481_07060 SM00388 His Kinase A (phosphoacceptor) domain AM481_07065 SM00448 cheY-homologous receiver domain AM481_07065 SM00862 Transcriptional regulatory protein, C terminal AM481_07125 SM00342 helix_turn_helix, arabinose operon control protein AM481_07155 SM00849 Metallo-beta-lactamase superfamily AM481_07165 SM00957 SecA DEAD-like domain AM481_07165 SM00958 SecA preprotein cross-linking domain AM481_07215 SM00342 helix_turn_helix, arabinose operon control protein AM481_07230 SM00564 beta-propeller repeat AM481_07295 SM00838 Elongation factor G C-terminus AM481_07315 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM481_07315 SM01232 AM481_07315 AM481_07350 SM00671 Sel1-like repeats. AM481_07405 SM00448 cheY-homologous receiver domain AM481_07410 SM00448 cheY-homologous receiver domain AM481_07415 SM00260 Two component signalling adaptor domain AM481_07420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM481_07425 SM00073 Histidine Phosphotransfer domain AM481_07425 SM00260 Two component signalling adaptor domain AM481_07425 SM00387 Histidine kinase-like ATPases AM481_07425 SM00448 cheY-homologous receiver domain AM481_07425 SM01231 AM481_07425 AM481_07575 SM00845 GatB domain AM481_07610 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_07645 SM00342 helix_turn_helix, arabinose operon control protein AM481_07665 SM00342 helix_turn_helix, arabinose operon control protein AM481_07670 SM00829 Enoylreductase AM481_07705 SM00244 prohibitin homologues AM481_07720 SM00563 Phosphate acyltransferases AM481_07740 SM00448 cheY-homologous receiver domain AM481_07740 SM00862 Transcriptional regulatory protein, C terminal AM481_07745 SM00387 Histidine kinase-like ATPases AM481_07745 SM00388 His Kinase A (phosphoacceptor) domain AM481_07795 SM00822 AM481_07795 AM481_07830 SM00014 Acid phosphatase homologues AM481_07940 SM00450 Rhodanese Homology Domain AM481_07985 SM00861 Transketolase, pyrimidine binding domain AM481_08005 SM00881 CoA binding domain AM481_08055 SM00854 Bacterial capsule synthesis protein PGA_cap AM481_08085 SM00851 MGS-like domain AM481_08085 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM481_08090 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AM481_08105 SM01103 AM481_08105 AM481_08115 SM00382 ATPases associated with a variety of cellular activities AM481_08190 SM00046 Diacylglycerol kinase catalytic domain (presumed) AM481_08205 SM00883 Chaperonin 10 Kd subunit AM481_08220 SM00849 Metallo-beta-lactamase superfamily AM481_08360 SM00978 AM481_08360 AM481_08365 SM00382 ATPases associated with a variety of cellular activities AM481_08400 SM00893 Electron transfer flavoprotein domain AM481_08405 SM00893 Electron transfer flavoprotein domain AM481_08410 SM00434 DNA Topoisomerase IV AM481_08480 SM00382 ATPases associated with a variety of cellular activities AM481_08485 SM00849 Metallo-beta-lactamase superfamily AM481_08600 SM00382 ATPases associated with a variety of cellular activities AM481_08605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM481_08610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM481_08615 SM01211 AM481_08615 AM481_08685 SM00382 ATPases associated with a variety of cellular activities AM481_08735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM481_08745 SM00838 Elongation factor G C-terminus AM481_08760 SM00358 Double-stranded RNA binding motif AM481_08760 SM00535 Ribonuclease III family AM481_08830 SM00267 diguanylate cyclase AM481_08840 SM00487 DEAD-like helicases superfamily AM481_08840 SM00490 helicase superfamily c-terminal domain AM481_08855 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM481_08875 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM481_08975 SM01329 AM481_08975 AM481_09030 SM00880 AM481_09030 AM481_09030 SM01118 AM481_09030 AM481_09060 SM00487 DEAD-like helicases superfamily AM481_09060 SM00490 helicase superfamily c-terminal domain AM481_09115 SM00344 helix_turn_helix ASNC type AM481_09145 SM00382 ATPases associated with a variety of cellular activities AM481_09190 SM00936 Penicillin-binding protein 5, C-terminal domain AM481_09210 SM00257 Lysin motif AM481_09245 SM00052 Putative diguanylate phosphodiesterase AM481_09260 SM00841 Elongation factor P, C-terminal AM481_09260 SM01185 AM481_09260 AM481_09400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM481_09405 SM00829 Enoylreductase AM481_09470 SM00382 ATPases associated with a variety of cellular activities AM481_09515 SM00382 ATPases associated with a variety of cellular activities AM481_09520 SM00382 ATPases associated with a variety of cellular activities AM481_09580 SM01092 CO dehydrogenase flavoprotein C-terminal domain AM481_09585 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM481_09595 SM00463 Small MutS-related domain AM481_09980 SM01040 BRO family, N-terminal domain AM481_10015 SM01230 AM481_10015 AM481_10070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM481_10080 SM00919 Malic enzyme, NAD binding domain AM481_10080 SM01274 AM481_10080 AM481_10085 SM00052 Putative diguanylate phosphodiesterase AM481_10085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM481_10085 SM00091 PAS domain AM481_10085 SM00267 diguanylate cyclase AM481_10100 SM00996 S-adenosyl-L-homocysteine hydrolase AM481_10100 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM481_10120 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_10165 SM00342 helix_turn_helix, arabinose operon control protein AM481_10215 SM00382 ATPases associated with a variety of cellular activities AM481_10230 SM00479 AM481_10230 AM481_10270 SM00062 Bacterial periplasmic substrate-binding proteins AM481_10285 SM00382 ATPases associated with a variety of cellular activities AM481_10305 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_10330 SM00382 ATPases associated with a variety of cellular activities AM481_10340 SM00448 cheY-homologous receiver domain AM481_10340 SM00862 Transcriptional regulatory protein, C terminal AM481_10345 SM00387 Histidine kinase-like ATPases AM481_10345 SM00388 His Kinase A (phosphoacceptor) domain AM481_10405 SM00830 Chorismate mutase type II AM481_10470 SM00357 Cold shock protein domain AM481_10475 SM00487 DEAD-like helicases superfamily AM481_10475 SM00490 helicase superfamily c-terminal domain AM481_10495 SM00855 Phosphoglycerate mutase family AM481_10575 SM00220 Serine/Threonine protein kinases, catalytic domain AM481_10650 SM01034 Sensors of blue-light using FAD AM481_10665 SM00342 helix_turn_helix, arabinose operon control protein AM481_10685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_10685 SM00895 AM481_10685 AM481_10700 SM00972 Spore Coat Protein U domain AM481_10725 SM00972 Spore Coat Protein U domain AM481_10890 SM00382 ATPases associated with a variety of cellular activities AM481_10960 SM00849 Metallo-beta-lactamase superfamily AM481_10970 SM00382 ATPases associated with a variety of cellular activities AM481_10970 SM00930 AM481_10970 AM481_10980 SM01209 AM481_10980 AM481_10980 SM01210 AM481_10980 AM481_10985 SM00798 AICARFT/IMPCHase bienzyme AM481_10985 SM00851 MGS-like domain AM481_11010 SM01228 AM481_11010 AM481_11030 SM00460 Transglutaminase/protease-like homologues AM481_11040 SM01005 Alanine racemase, C-terminal domain AM481_11160 SM00937 AM481_11160 AM481_11175 SM00062 Bacterial periplasmic substrate-binding proteins AM481_11180 SM00342 helix_turn_helix, arabinose operon control protein AM481_11185 SM00822 AM481_11185 AM481_11200 SM00903 Flavin reductase like domain AM481_11215 SM00905 Dihydroneopterin aldolase AM481_11240 SM00387 Histidine kinase-like ATPases AM481_11240 SM00388 His Kinase A (phosphoacceptor) domain AM481_11245 SM00448 cheY-homologous receiver domain AM481_11245 SM00862 Transcriptional regulatory protein, C terminal AM481_11250 SM01230 AM481_11250 AM481_11335 SM00363 S4 RNA-binding domain AM481_11360 SM00853 MutL C terminal dimerisation domain AM481_11360 SM01340 AM481_11360 AM481_11430 SM00862 Transcriptional regulatory protein, C terminal AM481_11445 SM00382 ATPases associated with a variety of cellular activities AM481_11455 SM00342 helix_turn_helix, arabinose operon control protein AM481_11455 SM00871 Bacterial transcription activator, effector binding domain AM481_11495 SM00830 Chorismate mutase type II AM481_11500 SM00344 helix_turn_helix ASNC type AM481_11580 SM00382 ATPases associated with a variety of cellular activities AM481_11600 SM00831 Cation transporter/ATPase, N-terminus AM481_11615 SM00344 helix_turn_helix ASNC type AM481_11645 SM00822 AM481_11645 AM481_11670 SM00382 ATPases associated with a variety of cellular activities AM481_11695 SM00226 Low molecular weight phosphatase family AM481_11730 SM01236 AM481_11730 AM481_11800 SM00530 Helix-turn-helix XRE-family like proteins AM481_12045 SM01252 AM481_12045 AM481_12110 SM01040 BRO family, N-terminal domain AM481_12155 SM00878 Biotin carboxylase C-terminal domain AM481_12185 SM00448 cheY-homologous receiver domain AM481_12185 SM01012 AM481_12185 AM481_12205 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM481_12215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM481_12220 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_12235 SM00852 Probable molybdopterin binding domain AM481_12240 SM00852 Probable molybdopterin binding domain AM481_12250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_12355 SM00382 ATPases associated with a variety of cellular activities AM481_12355 SM00448 cheY-homologous receiver domain AM481_12360 SM00091 PAS domain AM481_12360 SM00387 Histidine kinase-like ATPases AM481_12360 SM00388 His Kinase A (phosphoacceptor) domain AM481_12365 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_12395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM481_12405 SM00935 Outer membrane protein (OmpH-like) AM481_12440 SM00382 ATPases associated with a variety of cellular activities AM481_12445 SM00363 S4 RNA-binding domain AM481_12475 SM00344 helix_turn_helix ASNC type AM481_12520 SM00052 Putative diguanylate phosphodiesterase AM481_12520 SM00091 PAS domain AM481_12520 SM00267 diguanylate cyclase AM481_12530 SM00347 helix_turn_helix multiple antibiotic resistance protein AM481_12605 SM00116 Domain in cystathionine beta-synthase and other proteins. AM481_12630 SM00382 ATPases associated with a variety of cellular activities AM481_12630 SM00962 SRP54-type protein, GTPase domain AM481_12630 SM00963 SRP54-type protein, helical bundle domain AM481_12695 SM01264 AM481_12695 AM481_12735 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM481_12750 SM00382 ATPases associated with a variety of cellular activities AM481_12750 SM01086 C-terminal, D2-small domain, of ClpB protein AM481_12815 SM01192 AM481_12815 AM481_12815 SM01193 AM481_12815 AM481_12835 SM00882 Coenzyme A transferase AM481_12840 SM00882 Coenzyme A transferase AM481_12850 SM00998 Adenylosuccinate lyase C-terminus AM481_12885 SM00710 Parallel beta-helix repeats AM481_12895 SM00564 beta-propeller repeat AM481_12915 SM00849 Metallo-beta-lactamase superfamily AM481_12920 SM00346 helix_turn_helix isocitrate lyase regulation AM481_12940 SM00855 Phosphoglycerate mutase family AM481_12960 SM00347 helix_turn_helix multiple antibiotic resistance protein AM481_13005 SM00903 Flavin reductase like domain AM481_13010 SM00342 helix_turn_helix, arabinose operon control protein AM481_13045 SM00882 Coenzyme A transferase AM481_13050 SM00882 Coenzyme A transferase AM481_13065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM481_13080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_13080 SM00895 AM481_13080 AM481_13115 SM00855 Phosphoglycerate mutase family AM481_13130 SM00091 PAS domain AM481_13130 SM00382 ATPases associated with a variety of cellular activities AM481_13150 SM00829 Enoylreductase AM481_13170 SM01060 AM481_13170 AM481_13195 SM00347 helix_turn_helix multiple antibiotic resistance protein AM481_13215 SM00422 helix_turn_helix, mercury resistance AM481_13295 SM00912 haemagglutination activity domain AM481_13325 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_13325 SM00866 AM481_13325 AM481_13355 SM00346 helix_turn_helix isocitrate lyase regulation AM481_13440 SM00342 helix_turn_helix, arabinose operon control protein AM481_13455 SM00829 Enoylreductase AM481_13470 SM00382 ATPases associated with a variety of cellular activities AM481_13480 SM00342 helix_turn_helix, arabinose operon control protein AM481_13490 SM01400 AM481_13490 AM481_13570 SM00421 helix_turn_helix, Lux Regulon AM481_13625 SM00530 Helix-turn-helix XRE-family like proteins AM481_13665 SM00822 AM481_13665 AM481_13670 SM00822 AM481_13670 AM481_13680 SM00342 helix_turn_helix, arabinose operon control protein AM481_13690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM481_13690 SM00387 Histidine kinase-like ATPases AM481_13690 SM00388 His Kinase A (phosphoacceptor) domain AM481_13695 SM00448 cheY-homologous receiver domain AM481_13695 SM00862 Transcriptional regulatory protein, C terminal AM481_13790 SM00829 Enoylreductase AM481_13815 SM00155 Phospholipase D. Active site motifs. AM481_13840 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_13890 SM00382 ATPases associated with a variety of cellular activities AM481_13925 SM00342 helix_turn_helix, arabinose operon control protein AM481_13935 SM00903 Flavin reductase like domain AM481_13960 SM00342 helix_turn_helix, arabinose operon control protein AM481_13995 SM00882 Coenzyme A transferase AM481_14000 SM00882 Coenzyme A transferase AM481_14055 SM00567 E-Z type HEAT repeats AM481_14060 SM00382 ATPases associated with a variety of cellular activities AM481_14085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_14085 SM00866 AM481_14085 AM481_14105 SM00342 helix_turn_helix, arabinose operon control protein AM481_14130 SM00849 Metallo-beta-lactamase superfamily AM481_14135 SM00382 ATPases associated with a variety of cellular activities AM481_14145 SM00829 Enoylreductase AM481_14165 SM00861 Transketolase, pyrimidine binding domain AM481_14175 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_14190 SM00267 diguanylate cyclase AM481_14215 SM00382 ATPases associated with a variety of cellular activities AM481_14245 SM00341 Helicase and RNase D C-terminal AM481_14245 SM00474 3'-5' exonuclease AM481_14250 SM00493 AM481_14250 AM481_14305 SM01324 AM481_14305 AM481_14345 SM00382 ATPases associated with a variety of cellular activities AM481_14405 SM00855 Phosphoglycerate mutase family AM481_14435 SM01006 Siderophore biosynthesis protein domain AM481_14525 SM00342 helix_turn_helix, arabinose operon control protein AM481_14535 SM00411 bacterial (prokaryotic) histone like domain AM481_14570 SM00271 DnaJ molecular chaperone homology domain AM481_14585 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AM481_14595 SM00487 DEAD-like helicases superfamily AM481_14595 SM00490 helicase superfamily c-terminal domain AM481_14595 SM00982 AM481_14595 AM481_14595 SM01058 CarD-like/TRCF domain AM481_14650 SM00382 ATPases associated with a variety of cellular activities AM481_14725 SM00342 helix_turn_helix, arabinose operon control protein AM481_14740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM481_14750 SM00411 bacterial (prokaryotic) histone like domain AM481_14755 SM00316 Ribosomal protein S1-like RNA-binding domain AM481_14780 SM00986 Uracil DNA glycosylase superfamily AM481_14780 SM00987 UreE urease accessory protein, C-terminal domain AM481_14840 SM00382 ATPases associated with a variety of cellular activities AM481_14855 SM00470 ParB-like nuclease domain AM481_14915 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AM481_14925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM481_14945 SM00382 ATPases associated with a variety of cellular activities AM481_14955 SM00342 helix_turn_helix, arabinose operon control protein AM481_14975 SM00344 helix_turn_helix ASNC type AM481_15010 SM00867 YceI-like domain AM481_15020 SM00861 Transketolase, pyrimidine binding domain AM481_15060 SM00530 Helix-turn-helix XRE-family like proteins AM481_15080 SM00729 Elongator protein 3, MiaB family, Radical SAM AM481_15080 SM00876 Biotin and Thiamin Synthesis associated domain AM481_15165 SM01236 AM481_15165 AM481_15175 SM00563 Phosphate acyltransferases AM481_15185 SM00344 helix_turn_helix ASNC type AM481_15195 SM00382 ATPases associated with a variety of cellular activities AM481_15210 SM00062 Bacterial periplasmic substrate-binding proteins AM481_15245 SM00382 ATPases associated with a variety of cellular activities AM481_15245 SM00930 AM481_15245 AM481_15265 SM00100 Cyclic nucleotide-monophosphate binding domain AM481_15265 SM00419 helix_turn_helix, cAMP Regulatory protein AM481_15300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM481_15315 SM00342 helix_turn_helix, arabinose operon control protein AM481_15340 SM00870 AM481_15340 AM481_15345 SM00481 DNA polymerase alpha chain like domain AM481_15395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM481_15425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_15425 SM00895 AM481_15425 AM481_15450 SM00382 ATPases associated with a variety of cellular activities AM481_15455 SM00062 Bacterial periplasmic substrate-binding proteins AM481_15505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_15525 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM481_15575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_15610 SM00822 AM481_15610 AM481_15615 SM00450 Rhodanese Homology Domain AM481_15655 SM00062 Bacterial periplasmic substrate-binding proteins AM481_15660 SM00062 Bacterial periplasmic substrate-binding proteins AM481_15665 SM00382 ATPases associated with a variety of cellular activities AM481_15690 SM00421 helix_turn_helix, Lux Regulon AM481_15690 SM00448 cheY-homologous receiver domain AM481_15695 SM00387 Histidine kinase-like ATPases AM481_15695 SM00388 His Kinase A (phosphoacceptor) domain AM481_15695 SM00448 cheY-homologous receiver domain AM481_15705 SM00344 helix_turn_helix ASNC type AM481_15725 SM00384 DNA binding domain with preference for A/T rich regions AM481_15740 SM01060 AM481_15740 AM481_15745 SM01236 AM481_15745 AM481_15825 SM00878 Biotin carboxylase C-terminal domain AM481_15870 SM00882 Coenzyme A transferase AM481_15875 SM00882 Coenzyme A transferase AM481_15910 SM00346 helix_turn_helix isocitrate lyase regulation AM481_15930 SM00346 helix_turn_helix isocitrate lyase regulation AM481_15970 SM00382 ATPases associated with a variety of cellular activities AM481_15980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_15980 SM00866 AM481_15980 AM481_15990 SM00346 helix_turn_helix isocitrate lyase regulation AM481_16040 SM00903 Flavin reductase like domain AM481_16055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_16055 SM00895 AM481_16055 AM481_16070 SM01060 AM481_16070 AM481_16200 SM00342 helix_turn_helix, arabinose operon control protein AM481_16225 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_16225 SM00895 AM481_16225 AM481_16235 SM01130 AM481_16235 AM481_16250 SM00422 helix_turn_helix, mercury resistance AM481_16275 SM00671 Sel1-like repeats. AM481_16285 SM00878 Biotin carboxylase C-terminal domain AM481_16290 SM00796 Allophanate hydrolase subunit 1 AM481_16290 SM00797 Allophanate hydrolase subunit 2 AM481_16385 SM00422 helix_turn_helix, mercury resistance AM481_16410 SM00052 Putative diguanylate phosphodiesterase AM481_16420 SM00344 helix_turn_helix ASNC type AM481_16425 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AM481_16425 SM00534 ATPase domain of DNA mismatch repair MUTS family AM481_16470 SM00382 ATPases associated with a variety of cellular activities AM481_16480 SM00382 ATPases associated with a variety of cellular activities AM481_16500 SM00116 Domain in cystathionine beta-synthase and other proteins. AM481_16505 SM00840 AM481_16505 AM481_16585 SM00357 Cold shock protein domain AM481_16610 SM00530 Helix-turn-helix XRE-family like proteins AM481_16665 SM00422 helix_turn_helix, mercury resistance AM481_16725 SM00382 ATPases associated with a variety of cellular activities AM481_16725 SM00487 DEAD-like helicases superfamily AM481_16725 SM00490 helicase superfamily c-terminal domain AM481_16725 SM00847 Helicase associated domain (HA2) Add an annotation AM481_16805 SM00981 AM481_16805 AM481_16820 SM00382 ATPases associated with a variety of cellular activities AM481_16820 SM01086 C-terminal, D2-small domain, of ClpB protein AM481_16845 SM00100 Cyclic nucleotide-monophosphate binding domain AM481_16845 SM00419 helix_turn_helix, cAMP Regulatory protein AM481_16870 SM00788 Adenylosuccinate synthetase AM481_16880 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM481_16885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM481_16995 SM00344 helix_turn_helix ASNC type AM481_17010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM481_17010 SM00895 AM481_17010 AM481_17060 SM00671 Sel1-like repeats. AM481_17065 SM00671 Sel1-like repeats. AM481_17070 SM00671 Sel1-like repeats. AM481_17130 SM00267 diguanylate cyclase AM481_17140 SM00479 AM481_17140 AM481_17160 SM00382 ATPases associated with a variety of cellular activities AM481_17180 SM00257 Lysin motif AM481_17185 SM00479 AM481_17185 AM481_17240 SM00422 helix_turn_helix, mercury resistance AM481_17260 SM01011 Aminopeptidase P, N-terminal domain AM481_17355 SM00530 Helix-turn-helix XRE-family like proteins AM481_17390 SM00287 Bacterial SH3 domain homologues AM481_17575 SM00530 Helix-turn-helix XRE-family like proteins AM481_17680 SM00382 ATPases associated with a variety of cellular activities AM481_17680 SM00464 Found in ATP-dependent protease La (LON) AM481_17700 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM481_17710 SM00478 endonuclease III AM481_17760 SM00988 UreE urease accessory protein, N-terminal domain AM481_17805 SM01091 Transporter associated domain AM481_17910 SM00382 ATPases associated with a variety of cellular activities AM481_17920 SM00947 Carbonic anhydrase AM481_17980 SM01018 B12 binding domain AM481_17985 SM00861 Transketolase, pyrimidine binding domain AM481_18000 SM00822 AM481_18000 AM481_18030 SM00342 helix_turn_helix, arabinose operon control protein AM481_18100 SM00822 AM481_18100 AM481_18125 SM00346 helix_turn_helix isocitrate lyase regulation AM481_18165 SM01322 AM481_18165 AM481_18260 SM01130 AM481_18260 AM481_18305 SM00382 ATPases associated with a variety of cellular activities AM481_18365 SM00487 DEAD-like helicases superfamily AM481_18600 SM00530 Helix-turn-helix XRE-family like proteins AM481_18620 SM00382 ATPases associated with a variety of cellular activities AM481_18675 SM00530 Helix-turn-helix XRE-family like proteins AM481_18710 SM00479 AM481_18710 AM481_18750 SM00901 AM481_18750 AM481_18795 SM01004 Delta-aminolevulinic acid dehydratase AM481_18840 SM00382 ATPases associated with a variety of cellular activities AM481_18915 SM00563 Phosphate acyltransferases AM481_18955 SM00843 AM481_18955 AM481_18995 SM00838 Elongation factor G C-terminus AM481_18995 SM00889 Elongation factor G, domain IV AM481_19015 SM00825 Beta-ketoacyl synthase AM481_19075 SM01329 AM481_19075 AM481_19125 SM00363 S4 RNA-binding domain AM481_19190 SM00072 Guanylate kinase homologues. AM481_19230 SM00327 von Willebrand factor (vWF) type A domain AM481_19250 SM00481 DNA polymerase alpha chain like domain AM481_19265 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM481_19265 SM00475 5'-3' exonuclease AM481_19270 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AM481_19270 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AM481_19470 SM00479 AM481_19470 AM481_19505 SM00382 ATPases associated with a variety of cellular activities AM481_19600 SM00487 DEAD-like helicases superfamily AM481_19600 SM00490 helicase superfamily c-terminal domain AM481_19605 SM00470 ParB-like nuclease domain AM481_19615 SM00470 ParB-like nuclease domain AM481_19620 SM00382 ATPases associated with a variety of cellular activities AM481_19805 SM00671 Sel1-like repeats.