locus-tag class description ACX60_00005 PF11638 DnaA N-terminal domain ACX60_00005 PF08299 Bacterial dnaA protein helix-turn-helix ACX60_00005 PF00308 Bacterial dnaA protein ACX60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACX60_00010 PF02767 DNA polymerase III beta subunit, central domain ACX60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACX60_00015 PF02463 RecF/RecN/SMC N terminal domain ACX60_00020 PF18053 DNA gyrase B subunit insert domain ACX60_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ACX60_00020 PF00204 DNA gyrase B ACX60_00020 PF01751 Toprim domain ACX60_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_00030 PF09335 SNARE associated Golgi protein ACX60_00035 PF12848 ABC transporter ACX60_00035 PF00005 ABC transporter ACX60_00055 PF01521 Iron-sulphur cluster biosynthesis ACX60_00060 PF00561 alpha/beta hydrolase fold ACX60_00065 PF03702 Anhydro-N-acetylmuramic acid kinase ACX60_00070 PF00579 tRNA synthetases class I (W and Y) ACX60_00110 PF00209 Sodium:neurotransmitter symporter family ACX60_00120 PF01189 16S rRNA methyltransferase RsmB/F ACX60_00120 PF01029 NusB family ACX60_00125 PF02911 Formyl transferase, C-terminal domain ACX60_00125 PF00551 Formyl transferase ACX60_00130 PF00920 Dehydratase family ACX60_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_00145 PF03466 LysR substrate binding domain ACX60_00150 PF00860 Permease family ACX60_00155 PF00311 Phosphoenolpyruvate carboxylase ACX60_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region ACX60_00160 PF00440 Bacterial regulatory proteins, tetR family ACX60_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_00170 PF00873 AcrB/AcrD/AcrF family ACX60_00180 PF00226 DnaJ domain ACX60_00180 PF01556 DnaJ C terminal domain ACX60_00180 PF00684 DnaJ central domain ACX60_00190 PF05173 Dihydrodipicolinate reductase, C-terminus ACX60_00190 PF01113 Dihydrodipicolinate reductase, N-terminus ACX60_00200 PF07690 Major Facilitator Superfamily ACX60_00205 PF00248 Aldo/keto reductase family ACX60_00210 PF03466 LysR substrate binding domain ACX60_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_00220 PF00155 Aminotransferase class I and II ACX60_00220 PF00392 Bacterial regulatory proteins, gntR family ACX60_00225 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_00225 PF00107 Zinc-binding dehydrogenase ACX60_00230 PF03352 Methyladenine glycosylase ACX60_00245 PF00730 HhH-GPD superfamily base excision DNA repair protein ACX60_00245 PF00633 Helix-hairpin-helix motif ACX60_00245 PF14815 NUDIX domain ACX60_00245 PF10576 Iron-sulfur binding domain of endonuclease III ACX60_00260 PF07043 Protein of unknown function (DUF1328) ACX60_00265 PF03692 Putative zinc- or iron-chelating domain ACX60_00270 PF07995 Glucose / Sorbosone dehydrogenase ACX60_00275 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_00275 PF16193 AAA C-terminal domain ACX60_00275 PF12002 MgsA AAA+ ATPase C terminal ACX60_00280 PF01226 Formate/nitrite transporter ACX60_00290 PF01259 SAICAR synthetase ACX60_00300 PF00701 Dihydrodipicolinate synthetase family ACX60_00305 PF00857 Isochorismatase family ACX60_00310 PF01758 Sodium Bile acid symporter family ACX60_00315 PF01554 MatE ACX60_00320 PF04463 Protein of unknown function (DUF523) ACX60_00325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACX60_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACX60_00340 PF14497 Glutathione S-transferase, C-terminal domain ACX60_00340 PF02798 Glutathione S-transferase, N-terminal domain ACX60_00350 PF00324 Amino acid permease ACX60_00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACX60_00360 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACX60_00370 PF07702 UTRA domain ACX60_00370 PF00392 Bacterial regulatory proteins, gntR family ACX60_00375 PF05962 HutD ACX60_00380 PF17392 Urocanase C-terminal domain ACX60_00380 PF17391 Urocanase N-terminal domain ACX60_00380 PF01175 Urocanase Rossmann-like domain ACX60_00385 PF00221 Aromatic amino acid lyase ACX60_00390 PF00324 Amino acid permease ACX60_00395 PF01979 Amidohydrolase family ACX60_00400 PF00491 Arginase family ACX60_00415 PF01177 Asp/Glu/Hydantoin racemase ACX60_00420 PF01810 LysE type translocator ACX60_00440 PF01380 SIS domain ACX60_00445 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_00445 PF12804 MobA-like NTP transferase domain ACX60_00445 PF14602 Hexapeptide repeat of succinyl-transferase ACX60_00450 PF04608 Phosphatidylglycerophosphatase A ACX60_00455 PF00586 AIR synthase related protein, N-terminal domain ACX60_00455 PF02769 AIR synthase related protein, C-terminal domain ACX60_00460 PF01029 NusB family ACX60_00465 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACX60_00470 PF00925 GTP cyclohydrolase II ACX60_00470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACX60_00495 PF02580 D-Tyr-tRNA(Tyr) deacylase ACX60_00500 PF06628 Catalase-related immune-responsive ACX60_00500 PF00199 Catalase ACX60_00510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACX60_00510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACX60_00515 PF00581 Rhodanese-like domain ACX60_00520 PF02666 Phosphatidylserine decarboxylase ACX60_00530 PF00989 PAS fold ACX60_00530 PF11808 Phosphate regulon sensor protein PhoR ACX60_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_00530 PF00512 His Kinase A (phospho-acceptor) domain ACX60_00535 PF00072 Response regulator receiver domain ACX60_00535 PF00486 Transcriptional regulatory protein, C terminal ACX60_00545 PF00106 short chain dehydrogenase ACX60_00550 PF01554 MatE ACX60_00555 PF00155 Aminotransferase class I and II ACX60_00560 PF04286 Protein of unknown function (DUF445) ACX60_00575 PF04262 Glutamate-cysteine ligase ACX60_00580 PF02600 Disulfide bond formation protein DsbB ACX60_00590 PF00665 Integrase core domain ACX60_00590 PF13333 Integrase core domain ACX60_00590 PF13276 HTH-like domain ACX60_00595 PF01527 Transposase ACX60_00605 PF01476 LysM domain ACX60_00605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACX60_00645 PF05728 Uncharacterised protein family (UPF0227) ACX60_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_00650 PF01751 Toprim domain ACX60_00650 PF00986 DNA gyrase B subunit, carboxyl terminus ACX60_00650 PF00204 DNA gyrase B ACX60_00655 PF04115 Ureidoglycolate lyase ACX60_00660 PF03561 Allantoicase repeat ACX60_00665 PF01494 FAD binding domain ACX60_00675 PF00860 Permease family ACX60_00680 PF00576 HIUase/Transthyretin family ACX60_00710 PF02683 Cytochrome C biogenesis protein transmembrane region ACX60_00710 PF11412 Disulphide bond corrector protein DsbC ACX60_00715 PF00990 Diguanylate cyclase, GGDEF domain ACX60_00715 PF07694 5TMR of 5TMR-LYT ACX60_00720 PF07859 alpha/beta hydrolase fold ACX60_00730 PF03960 ArsC family ACX60_00735 PF03372 Endonuclease/Exonuclease/phosphatase family ACX60_00740 PF00156 Phosphoribosyl transferase domain ACX60_00750 PF00593 TonB dependent receptor ACX60_00750 PF07715 TonB-dependent Receptor Plug Domain ACX60_00760 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ACX60_00760 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ACX60_00765 PF03033 Glycosyltransferase family 28 N-terminal domain ACX60_00765 PF04101 Glycosyltransferase family 28 C-terminal domain ACX60_00770 PF08245 Mur ligase middle domain ACX60_00770 PF02875 Mur ligase family, glutamate ligase domain ACX60_00770 PF01225 Mur ligase family, catalytic domain ACX60_00775 PF01820 D-ala D-ala ligase N-terminus ACX60_00775 PF07478 D-ala D-ala ligase C-terminus ACX60_00780 PF08478 POTRA domain, FtsQ-type ACX60_00780 PF03799 Cell division protein FtsQ ACX60_00785 PF02491 SHS2 domain inserted in FTSA ACX60_00790 PF00091 Tubulin/FtsZ family, GTPase domain ACX60_00790 PF12327 FtsZ family, C-terminal domain ACX60_00795 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACX60_00805 PF01551 Peptidase family M23 ACX60_00810 PF17831 Pyruvate dehydrogenase E1 component middle domain ACX60_00810 PF00456 Transketolase, thiamine diphosphate binding domain ACX60_00815 PF02817 e3 binding domain ACX60_00815 PF00364 Biotin-requiring enzyme ACX60_00815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACX60_00825 PF01169 Uncharacterized protein family UPF0016 ACX60_00830 PF00593 TonB dependent receptor ACX60_00830 PF07715 TonB-dependent Receptor Plug Domain ACX60_00835 PF00258 Flavodoxin ACX60_00835 PF01613 Flavin reductase like domain ACX60_00840 PF03692 Putative zinc- or iron-chelating domain ACX60_00845 PF00571 CBS domain ACX60_00845 PF00478 IMP dehydrogenase / GMP reductase domain ACX60_00850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACX60_00850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACX60_00850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACX60_00850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACX60_00855 PF01243 Pyridoxamine 5'-phosphate oxidase ACX60_00855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACX60_00860 PF01368 DHH family ACX60_00860 PF02272 DHHA1 domain ACX60_00860 PF17768 RecJ OB domain ACX60_00870 PF03462 PCRF domain ACX60_00870 PF00472 RF-1 domain ACX60_00880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_00885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACX60_00895 PF00924 Mechanosensitive ion channel ACX60_00905 PF16177 Acetyl-coenzyme A synthetase N-terminus ACX60_00905 PF00501 AMP-binding enzyme ACX60_00905 PF13193 AMP-binding enzyme C-terminal domain ACX60_00910 PF00857 Isochorismatase family ACX60_00915 PF01037 Lrp/AsnC ligand binding domain ACX60_00920 PF00296 Luciferase-like monooxygenase ACX60_00925 PF03358 NADPH-dependent FMN reductase ACX60_00930 PF00196 Bacterial regulatory proteins, luxR family ACX60_00930 PF00072 Response regulator receiver domain ACX60_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_00940 PF00672 HAMP domain ACX60_00940 PF01627 Hpt domain ACX60_00940 PF00512 His Kinase A (phospho-acceptor) domain ACX60_00940 PF00072 Response regulator receiver domain ACX60_00945 PF04341 Protein of unknown function, DUF485 ACX60_00950 PF00474 Sodium:solute symporter family ACX60_00960 PF02028 BCCT, betaine/carnitine/choline family transporter ACX60_00970 PF17158 Membrane-associated sensor, integral membrane domain ACX60_00970 PF00990 Diguanylate cyclase, GGDEF domain ACX60_00975 PF00005 ABC transporter ACX60_00975 PF17760 UvrA interaction domain ACX60_00975 PF17755 UvrA DNA-binding domain ACX60_00980 PF00440 Bacterial regulatory proteins, tetR family ACX60_00980 PF16925 Tetracyclin repressor-like, C-terminal domain ACX60_00985 PF00107 Zinc-binding dehydrogenase ACX60_00985 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_00995 PF06942 GlpM protein ACX60_01000 PF08543 Phosphomethylpyrimidine kinase ACX60_01000 PF03070 TENA/THI-4/PQQC family ACX60_01000 PF02581 Thiamine monophosphate synthase ACX60_01010 PF07690 Major Facilitator Superfamily ACX60_01015 PF00436 Single-strand binding protein family ACX60_01025 PF03591 AzlC protein ACX60_01035 PF00324 Amino acid permease ACX60_01040 PF00392 Bacterial regulatory proteins, gntR family ACX60_01040 PF00155 Aminotransferase class I and II ACX60_01045 PF00202 Aminotransferase class-III ACX60_01050 PF00171 Aldehyde dehydrogenase family ACX60_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_01060 PF00857 Isochorismatase family ACX60_01065 PF02678 Pirin ACX60_01065 PF05726 Pirin C-terminal cupin domain ACX60_01070 PF01593 Flavin containing amine oxidoreductase ACX60_01095 PF07690 Major Facilitator Superfamily ACX60_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_01100 PF03466 LysR substrate binding domain ACX60_01125 PF12833 Helix-turn-helix domain ACX60_01125 PF02311 AraC-like ligand binding domain ACX60_01145 PF01638 HxlR-like helix-turn-helix ACX60_01175 PF01638 HxlR-like helix-turn-helix ACX60_01180 PF02525 Flavodoxin-like fold ACX60_01205 PF12833 Helix-turn-helix domain ACX60_01215 PF02705 K+ potassium transporter ACX60_01240 PF00230 Major intrinsic protein ACX60_01255 PF00977 Histidine biosynthesis protein ACX60_01260 PF01636 Phosphotransferase enzyme family ACX60_01275 PF03992 Antibiotic biosynthesis monooxygenase ACX60_01290 PF00977 Histidine biosynthesis protein ACX60_01305 PF00117 Glutamine amidotransferase class-I ACX60_01310 PF00475 Imidazoleglycerol-phosphate dehydratase ACX60_01330 PF00583 Acetyltransferase (GNAT) family ACX60_01335 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACX60_01335 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACX60_01340 PF00672 HAMP domain ACX60_01340 PF00512 His Kinase A (phospho-acceptor) domain ACX60_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_01345 PF00486 Transcriptional regulatory protein, C terminal ACX60_01345 PF00072 Response regulator receiver domain ACX60_01350 PF16921 Tex protein YqgF-like domain ACX60_01350 PF17674 HHH domain ACX60_01350 PF00575 S1 RNA binding domain ACX60_01350 PF09371 Tex-like protein N-terminal domain ACX60_01355 PF00916 Sulfate permease family ACX60_01355 PF01740 STAS domain ACX60_01360 PF00106 short chain dehydrogenase ACX60_01375 PF01965 DJ-1/PfpI family ACX60_01380 PF01053 Cys/Met metabolism PLP-dependent enzyme ACX60_01385 PF00005 ABC transporter ACX60_01385 PF12848 ABC transporter ACX60_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_01410 PF00529 HlyD membrane-fusion protein of T1SS ACX60_01415 PF00873 AcrB/AcrD/AcrF family ACX60_01420 PF01545 Cation efflux family ACX60_01450 PF00324 Amino acid permease ACX60_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACX60_01480 PF01795 MraW methylase family ACX60_01490 PF00905 Penicillin binding protein transpeptidase domain ACX60_01490 PF03717 Penicillin-binding Protein dimerisation domain ACX60_01495 PF08245 Mur ligase middle domain ACX60_01495 PF01225 Mur ligase family, catalytic domain ACX60_01495 PF02875 Mur ligase family, glutamate ligase domain ACX60_01500 PF01225 Mur ligase family, catalytic domain ACX60_01500 PF08245 Mur ligase middle domain ACX60_01500 PF02875 Mur ligase family, glutamate ligase domain ACX60_01505 PF00953 Glycosyl transferase family 4 ACX60_01515 PF13847 Methyltransferase domain ACX60_01520 PF00912 Transglycosylase ACX60_01520 PF00905 Penicillin binding protein transpeptidase domain ACX60_01520 PF17092 Penicillin-binding protein OB-like domain ACX60_01545 PF07660 Secretin and TonB N terminus short domain ACX60_01545 PF03958 Bacterial type II/III secretion system short domain ACX60_01545 PF00263 Bacterial type II and III secretion system protein ACX60_01545 PF11741 AMIN domain ACX60_01550 PF01202 Shikimate kinase ACX60_01555 PF01761 3-dehydroquinate synthase ACX60_01565 PF01645 Conserved region in glutamate synthase ACX60_01565 PF01493 GXGXG motif ACX60_01565 PF04898 Glutamate synthase central domain ACX60_01565 PF00310 Glutamine amidotransferases class-II ACX60_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_01570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACX60_01580 PF04011 LemA family ACX60_01585 PF04536 TPM domain ACX60_01595 PF07963 Prokaryotic N-terminal methylation motif ACX60_01595 PF00114 Pilin (bacterial filament) ACX60_01600 PF11846 Virulence factor membrane-bound polymerase, C-terminal ACX60_01600 PF04932 O-Antigen ligase ACX60_01600 PF15864 Protein glycosylation ligase ACX60_01605 PF00210 Ferritin-like domain ACX60_01610 PF04324 BFD-like [2Fe-2S] binding domain ACX60_01615 PF01042 Endoribonuclease L-PSP ACX60_01620 PF13291 ACT domain ACX60_01620 PF02824 TGS domain ACX60_01620 PF04607 Region found in RelA / SpoT proteins ACX60_01625 PF01192 RNA polymerase Rpb6 ACX60_01630 PF00625 Guanylate kinase ACX60_01635 PF02401 LytB protein ACX60_01675 PF00886 Ribosomal protein S16 ACX60_01680 PF05239 PRC-barrel domain ACX60_01680 PF01782 RimM N-terminal domain ACX60_01685 PF01746 tRNA (Guanine-1)-methyltransferase ACX60_01690 PF01245 Ribosomal protein L19 ACX60_01695 PF00561 alpha/beta hydrolase fold ACX60_01700 PF03280 Proteobacterial lipase chaperone protein ACX60_01705 PF09157 Pseudouridine synthase II TruB, C-terminal ACX60_01705 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACX60_01705 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACX60_01710 PF01925 Sulfite exporter TauE/SafE ACX60_01720 PF00892 EamA-like transporter family ACX60_01725 PF00892 EamA-like transporter family ACX60_01730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACX60_01730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACX60_01735 PF02913 FAD linked oxidases, C-terminal domain ACX60_01735 PF01565 FAD binding domain ACX60_01745 PF03992 Antibiotic biosynthesis monooxygenase ACX60_01750 PF02525 Flavodoxin-like fold ACX60_01760 PF07690 Major Facilitator Superfamily ACX60_01765 PF12805 FUSC-like inner membrane protein yccS ACX60_01770 PF00080 Copper/zinc superoxide dismutase (SODC) ACX60_01775 PF01594 AI-2E family transporter ACX60_01780 PF13614 AAA domain ACX60_01800 PF08241 Methyltransferase domain ACX60_01810 PF00324 Amino acid permease ACX60_01815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACX60_01815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACX60_01820 PF00202 Aminotransferase class-III ACX60_01825 PF04958 Arginine N-succinyltransferase beta subunit ACX60_01830 PF00171 Aldehyde dehydrogenase family ACX60_01835 PF04996 Succinylarginine dihydrolase ACX60_01840 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ACX60_01870 PF03466 LysR substrate binding domain ACX60_01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_01875 PF00892 EamA-like transporter family ACX60_01895 PF05746 DALR anticodon binding domain ACX60_01895 PF02092 Glycyl-tRNA synthetase beta subunit ACX60_01900 PF02091 Glycyl-tRNA synthetase alpha subunit ACX60_01905 PF07690 Major Facilitator Superfamily ACX60_01920 PF00571 CBS domain ACX60_01925 PF04024 PspC domain ACX60_01935 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACX60_01935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_01935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_01935 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_01945 PF08501 Shikimate dehydrogenase substrate binding domain ACX60_01945 PF01488 Shikimate / quinate 5-dehydrogenase ACX60_01945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACX60_01950 PF01218 Coproporphyrinogen III oxidase ACX60_01955 PF00925 GTP cyclohydrolase II ACX60_01960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACX60_01960 PF02780 Transketolase, C-terminal domain ACX60_01960 PF02779 Transketolase, pyrimidine binding domain ACX60_01965 PF00459 Inositol monophosphatase family ACX60_01970 PF00271 Helicase conserved C-terminal domain ACX60_01970 PF12343 Cold shock protein DEAD box A ACX60_01970 PF03880 DbpA RNA binding domain ACX60_01970 PF00270 DEAD/DEAH box helicase ACX60_01980 PF00005 ABC transporter ACX60_01985 PF02405 Permease MlaE ACX60_01995 PF05494 MlaC protein ACX60_02005 PF01544 CorA-like Mg2+ transporter protein ACX60_02010 PF03641 Possible lysine decarboxylase ACX60_02015 PF00293 NUDIX domain ACX60_02020 PF00156 Phosphoribosyl transferase domain ACX60_02025 PF17191 RecG wedge domain ACX60_02025 PF00271 Helicase conserved C-terminal domain ACX60_02025 PF00270 DEAD/DEAH box helicase ACX60_02040 PF01553 Acyltransferase ACX60_02050 PF00375 Sodium:dicarboxylate symporter family ACX60_02060 PF01926 50S ribosome-binding GTPase ACX60_02065 PF02082 Transcriptional regulator ACX60_02070 PF00970 Oxidoreductase FAD-binding domain ACX60_02070 PF00175 Oxidoreductase NAD-binding domain ACX60_02070 PF00042 Globin ACX60_02075 PF05872 Bacterial protein of unknown function (DUF853) ACX60_02080 PF01053 Cys/Met metabolism PLP-dependent enzyme ACX60_02085 PF00117 Glutamine amidotransferase class-I ACX60_02090 PF00338 Ribosomal protein S10p/S20e ACX60_02095 PF00297 Ribosomal protein L3 ACX60_02100 PF00573 Ribosomal protein L4/L1 family ACX60_02105 PF00276 Ribosomal protein L23 ACX60_02110 PF03947 Ribosomal Proteins L2, C-terminal domain ACX60_02110 PF00181 Ribosomal Proteins L2, RNA binding domain ACX60_02115 PF00203 Ribosomal protein S19 ACX60_02120 PF00237 Ribosomal protein L22p/L17e ACX60_02125 PF07650 KH domain ACX60_02125 PF00189 Ribosomal protein S3, C-terminal domain ACX60_02130 PF00252 Ribosomal protein L16p/L10e ACX60_02135 PF00831 Ribosomal L29 protein ACX60_02140 PF00366 Ribosomal protein S17 ACX60_02145 PF00238 Ribosomal protein L14p/L23e ACX60_02150 PF00467 KOW motif ACX60_02150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACX60_02155 PF00281 Ribosomal protein L5 ACX60_02155 PF00673 ribosomal L5P family C-terminus ACX60_02160 PF00253 Ribosomal protein S14p/S29e ACX60_02165 PF00410 Ribosomal protein S8 ACX60_02170 PF00347 Ribosomal protein L6 ACX60_02175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACX60_02180 PF03719 Ribosomal protein S5, C-terminal domain ACX60_02180 PF00333 Ribosomal protein S5, N-terminal domain ACX60_02185 PF00327 Ribosomal protein L30p/L7e ACX60_02190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACX60_02195 PF00344 SecY translocase ACX60_02200 PF00444 Ribosomal protein L36 ACX60_02205 PF00416 Ribosomal protein S13/S18 ACX60_02210 PF00411 Ribosomal protein S11 ACX60_02215 PF00163 Ribosomal protein S4/S9 N-terminal domain ACX60_02215 PF01479 S4 domain ACX60_02220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACX60_02220 PF01000 RNA polymerase Rpb3/RpoA insert domain ACX60_02220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACX60_02225 PF01196 Ribosomal protein L17 ACX60_02230 PF00743 Flavin-binding monooxygenase-like ACX60_02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_02235 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_02240 PF03937 Flavinator of succinate dehydrogenase ACX60_02270 PF09526 Probable metal-binding protein (DUF2387) ACX60_02275 PF01432 Peptidase family M3 ACX60_02280 PF08206 Ribonuclease B OB domain ACX60_02280 PF17876 Cold shock domain ACX60_02280 PF00773 RNB domain ACX60_02280 PF08461 Ribonuclease R winged-helix domain ACX60_02280 PF00575 S1 RNA binding domain ACX60_02325 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACX60_02330 PF12833 Helix-turn-helix domain ACX60_02335 PF00892 EamA-like transporter family ACX60_02340 PF03631 Virulence factor BrkB ACX60_02345 PF03358 NADPH-dependent FMN reductase ACX60_02370 PF02130 Uncharacterized protein family UPF0054 ACX60_02375 PF02562 PhoH-like protein ACX60_02380 PF01938 TRAM domain ACX60_02380 PF04055 Radical SAM superfamily ACX60_02380 PF00919 Uncharacterized protein family UPF0004 ACX60_02385 PF01464 Transglycosylase SLT domain ACX60_02385 PF01551 Peptidase family M23 ACX60_02385 PF10145 Phage-related minor tail protein ACX60_02395 PF00056 lactate/malate dehydrogenase, NAD binding domain ACX60_02395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACX60_02415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ACX60_02420 PF01066 CDP-alcohol phosphatidyltransferase ACX60_02465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_02465 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_02465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_02470 PF17932 Tetracyclin repressor-like, C-terminal domain ACX60_02470 PF00440 Bacterial regulatory proteins, tetR family ACX60_02485 PF01039 Carboxyl transferase domain ACX60_02490 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_02490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_02490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_02500 PF00364 Biotin-requiring enzyme ACX60_02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_02500 PF00289 Biotin carboxylase, N-terminal domain ACX60_02500 PF02785 Biotin carboxylase C-terminal domain ACX60_02510 PF04386 Stringent starvation protein B ACX60_02515 PF13417 Glutathione S-transferase, N-terminal domain ACX60_02515 PF00043 Glutathione S-transferase, C-terminal domain ACX60_02520 PF00380 Ribosomal protein S9/S16 ACX60_02525 PF00572 Ribosomal protein L13 ACX60_02530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACX60_02535 PF00398 Ribosomal RNA adenine dimethylase ACX60_02540 PF00149 Calcineurin-like phosphoesterase ACX60_02560 PF01926 50S ribosome-binding GTPase ACX60_02560 PF16360 GTP-binding GTPase Middle Region ACX60_02560 PF13167 GTP-binding GTPase N-terminal ACX60_02570 PF13091 PLD-like domain ACX60_02575 PF00149 Calcineurin-like phosphoesterase ACX60_02575 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACX60_02580 PF00691 OmpA family ACX60_02580 PF01389 OmpA-like transmembrane domain ACX60_02585 PF17152 Periplasmic sensor domain ACX60_02585 PF00990 Diguanylate cyclase, GGDEF domain ACX60_02620 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_02620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACX60_02630 PF00753 Metallo-beta-lactamase superfamily ACX60_02630 PF04273 Putative phosphatase (DUF442) ACX60_02635 PF00561 alpha/beta hydrolase fold ACX60_02640 PF00085 Thioredoxin ACX60_02645 PF03061 Thioesterase superfamily ACX60_02680 PF03887 YfbU domain ACX60_02750 PF04945 YHS domain ACX60_02755 PF00672 HAMP domain ACX60_02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_02755 PF00512 His Kinase A (phospho-acceptor) domain ACX60_02760 PF00486 Transcriptional regulatory protein, C terminal ACX60_02760 PF00072 Response regulator receiver domain ACX60_02770 PF07731 Multicopper oxidase ACX60_02770 PF00394 Multicopper oxidase ACX60_02770 PF07732 Multicopper oxidase ACX60_02790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_02795 PF00873 AcrB/AcrD/AcrF family ACX60_02805 PF07670 Nucleoside recognition ACX60_02805 PF02421 Ferrous iron transport protein B ACX60_02805 PF07664 Ferrous iron transport protein B C terminus ACX60_02820 PF13411 MerR HTH family regulatory protein ACX60_02840 PF00589 Phage integrase family ACX60_02840 PF13356 Arm DNA-binding domain ACX60_02845 PF04461 Protein of unknown function (DUF520) ACX60_02855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACX60_02855 PF01266 FAD dependent oxidoreductase ACX60_02865 PF03795 YCII-related domain ACX60_02870 PF04279 Intracellular septation protein A ACX60_02875 PF02811 PHP domain ACX60_02880 PF01062 Bestrophin, RFP-TM, chloride channel ACX60_02885 PF04002 RadC-like JAB domain ACX60_02890 PF02441 Flavoprotein ACX60_02890 PF04127 DNA / pantothenate metabolism flavoprotein ACX60_02895 PF07549 SecD/SecF GG Motif ACX60_02895 PF02355 Protein export membrane protein ACX60_02900 PF13721 SecD export protein N-terminal TM region ACX60_02900 PF07549 SecD/SecF GG Motif ACX60_02900 PF02355 Protein export membrane protein ACX60_02905 PF02699 Preprotein translocase subunit ACX60_02910 PF01702 Queuine tRNA-ribosyltransferase ACX60_02925 PF02547 Queuosine biosynthesis protein ACX60_02935 PF00589 Phage integrase family ACX60_02935 PF13356 Arm DNA-binding domain ACX60_02950 PF01381 Helix-turn-helix ACX60_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_02975 PF07689 KaiB domain ACX60_02975 PF00512 His Kinase A (phospho-acceptor) domain ACX60_02980 PF03710 Glutamate-ammonia ligase adenylyltransferase ACX60_02980 PF08335 GlnD PII-uridylyltransferase ACX60_02985 PF01063 Amino-transferase class IV ACX60_03000 PF01522 Polysaccharide deacetylase ACX60_03005 PF00535 Glycosyl transferase family 2 ACX60_03010 PF00534 Glycosyl transferases group 1 ACX60_03010 PF13439 Glycosyltransferase Family 4 ACX60_03025 PF02350 UDP-N-acetylglucosamine 2-epimerase ACX60_03040 PF00152 tRNA synthetases class II (D, K and N) ACX60_03040 PF02938 GAD domain ACX60_03040 PF01336 OB-fold nucleic acid binding domain ACX60_03050 PF07715 TonB-dependent Receptor Plug Domain ACX60_03050 PF00593 TonB dependent receptor ACX60_03070 PF06146 Phosphate-starvation-inducible E ACX60_03075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_03075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_03075 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACX60_03075 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_03080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_03080 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_03080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_03080 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACX60_03090 PF00672 HAMP domain ACX60_03090 PF00512 His Kinase A (phospho-acceptor) domain ACX60_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_03095 PF00072 Response regulator receiver domain ACX60_03095 PF00486 Transcriptional regulatory protein, C terminal ACX60_03100 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACX60_03120 PF01923 Cobalamin adenosyltransferase ACX60_03125 PF07715 TonB-dependent Receptor Plug Domain ACX60_03125 PF00593 TonB dependent receptor ACX60_03130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACX60_03135 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_03160 PF00290 Tryptophan synthase alpha chain ACX60_03165 PF01039 Carboxyl transferase domain ACX60_03170 PF02875 Mur ligase family, glutamate ligase domain ACX60_03170 PF08245 Mur ligase middle domain ACX60_03185 PF00753 Metallo-beta-lactamase superfamily ACX60_03190 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACX60_03190 PF00578 AhpC/TSA family ACX60_03195 PF02810 SEC-C motif ACX60_03195 PF07516 SecA Wing and Scaffold domain ACX60_03195 PF01043 SecA preprotein cross-linking domain ACX60_03195 PF07517 SecA DEAD-like domain ACX60_03205 PF07690 Major Facilitator Superfamily ACX60_03205 PF00083 Sugar (and other) transporter ACX60_03210 PF03006 Haemolysin-III related ACX60_03220 PF13673 Acetyltransferase (GNAT) domain ACX60_03235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACX60_03235 PF00378 Enoyl-CoA hydratase/isomerase ACX60_03235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACX60_03240 PF00108 Thiolase, N-terminal domain ACX60_03240 PF02803 Thiolase, C-terminal domain ACX60_03245 PF12833 Helix-turn-helix domain ACX60_03245 PF02311 AraC-like ligand binding domain ACX60_03250 PF02515 CoA-transferase family III ACX60_03255 PF04966 Carbohydrate-selective porin, OprB family ACX60_03260 PF01011 PQQ enzyme repeat ACX60_03265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACX60_03265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACX60_03275 PF00893 Small Multidrug Resistance protein ACX60_03285 PF02803 Thiolase, C-terminal domain ACX60_03285 PF00108 Thiolase, N-terminal domain ACX60_03295 PF00691 OmpA family ACX60_03295 PF13505 Outer membrane protein beta-barrel domain ACX60_03305 PF01139 tRNA-splicing ligase RtcB ACX60_03310 PF00324 Amino acid permease ACX60_03315 PF08468 Methyltransferase small domain N-terminal ACX60_03315 PF05175 Methyltransferase small domain ACX60_03320 PF00860 Permease family ACX60_03330 PF01741 Large-conductance mechanosensitive channel, MscL ACX60_03345 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACX60_03345 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACX60_03345 PF06827 Zinc finger found in FPG and IleRS ACX60_03350 PF02245 Methylpurine-DNA glycosylase (MPG) ACX60_03355 PF00593 TonB dependent receptor ACX60_03355 PF07715 TonB-dependent Receptor Plug Domain ACX60_03360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_03365 PF03547 Membrane transport protein ACX60_03375 PF10411 Disulfide bond isomerase protein N-terminus ACX60_03375 PF13098 Thioredoxin-like domain ACX60_03380 PF01571 Aminomethyltransferase folate-binding domain ACX60_03390 PF04343 Protein of unknown function, DUF488 ACX60_03395 PF03831 PhnA domain ACX60_03395 PF08274 PhnA Zinc-Ribbon ACX60_03400 PF07411 Domain of unknown function (DUF1508) ACX60_03405 PF03129 Anticodon binding domain ACX60_03405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACX60_03405 PF04073 Aminoacyl-tRNA editing domain ACX60_03410 PF00873 AcrB/AcrD/AcrF family ACX60_03425 PF00072 Response regulator receiver domain ACX60_03430 PF00072 Response regulator receiver domain ACX60_03435 PF01584 CheW-like domain ACX60_03440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACX60_03440 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACX60_03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_03445 PF01584 CheW-like domain ACX60_03445 PF01627 Hpt domain ACX60_03445 PF00072 Response regulator receiver domain ACX60_03455 PF01546 Peptidase family M20/M25/M40 ACX60_03455 PF07687 Peptidase dimerisation domain ACX60_03460 PF08085 Entericidin EcnA/B family ACX60_03470 PF04304 Protein of unknown function (DUF454) ACX60_03475 PF17969 L,D-transpeptidase C-terminal domain ACX60_03475 PF03734 L,D-transpeptidase catalytic domain ACX60_03515 PF00258 Flavodoxin ACX60_03515 PF00175 Oxidoreductase NAD-binding domain ACX60_03515 PF00667 FAD binding domain ACX60_03525 PF12805 FUSC-like inner membrane protein yccS ACX60_03530 PF07690 Major Facilitator Superfamily ACX60_03535 PF00881 Nitroreductase family ACX60_03545 PF01235 Sodium:alanine symporter family ACX60_03550 PF01734 Patatin-like phospholipase ACX60_03555 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_03555 PF13291 ACT domain ACX60_03560 PF05992 SbmA/BacA-like family ACX60_03565 PF01431 Peptidase family M13 ACX60_03565 PF05649 Peptidase family M13 ACX60_03590 PF02934 GatB/GatE catalytic domain ACX60_03590 PF02637 GatB domain ACX60_03595 PF01425 Amidase ACX60_03600 PF02686 Glu-tRNAGln amidotransferase C subunit ACX60_03610 PF04085 rod shape-determining protein MreC ACX60_03615 PF04093 rod shape-determining protein MreD ACX60_03620 PF02545 Maf-like protein ACX60_03625 PF00575 S1 RNA binding domain ACX60_03625 PF10150 Ribonuclease E/G family ACX60_03635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ACX60_03635 PF06974 Protein of unknown function (DUF1298) ACX60_03640 PF01507 Phosphoadenosine phosphosulfate reductase family ACX60_03655 PF02525 Flavodoxin-like fold ACX60_03675 PF02673 Bacitracin resistance protein BacA ACX60_03680 PF12833 Helix-turn-helix domain ACX60_03680 PF06719 AraC-type transcriptional regulator N-terminus ACX60_03685 PF00698 Acyl transferase domain ACX60_03685 PF16197 Ketoacyl-synthetase C-terminal extension ACX60_03685 PF08990 Erythronolide synthase docking ACX60_03685 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_03685 PF08659 KR domain ACX60_03685 PF00550 Phosphopantetheine attachment site ACX60_03685 PF14765 Polyketide synthase dehydratase ACX60_03685 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_03685 PF09277 Erythronolide synthase, docking ACX60_03685 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_03690 PF01965 DJ-1/PfpI family ACX60_03700 PF00324 Amino acid permease ACX60_03705 PF04303 PrpF protein ACX60_03710 PF00348 Polyprenyl synthetase ACX60_03715 PF04237 YjbR ACX60_03720 PF01145 SPFH domain / Band 7 family ACX60_03730 PF01734 Patatin-like phospholipase ACX60_03750 PF08019 Phosphoethanolamine transferase EptA/EptB ACX60_03750 PF00884 Sulfatase ACX60_03755 PF00486 Transcriptional regulatory protein, C terminal ACX60_03755 PF00072 Response regulator receiver domain ACX60_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_03760 PF08521 Two-component sensor kinase N-terminal ACX60_03760 PF00512 His Kinase A (phospho-acceptor) domain ACX60_03770 PF00909 Ammonium Transporter Family ACX60_03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_03775 PF03466 LysR substrate binding domain ACX60_03795 PF08264 Anticodon-binding domain of tRNA ACX60_03795 PF10458 Valyl tRNA synthetase tRNA binding arm ACX60_03795 PF00133 tRNA synthetases class I (I, L, M and V) ACX60_03815 PF01906 Putative heavy-metal-binding ACX60_03820 PF01906 Putative heavy-metal-binding ACX60_03825 PF02321 Outer membrane efflux protein ACX60_03830 PF00873 AcrB/AcrD/AcrF family ACX60_03835 PF00529 HlyD membrane-fusion protein of T1SS ACX60_03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_03840 PF01569 PAP2 superfamily ACX60_03850 PF00348 Polyprenyl synthetase ACX60_03860 PF00829 Ribosomal prokaryotic L21 protein ACX60_03865 PF01016 Ribosomal L27 protein ACX60_03870 PF03548 Outer membrane lipoprotein carrier protein LolA ACX60_03880 PF02403 Seryl-tRNA synthetase N-terminal domain ACX60_03880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACX60_03885 PF10414 Sirohaem synthase dimerisation region ACX60_03885 PF14824 Sirohaem biosynthesis protein central ACX60_03885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACX60_03890 PF00588 SpoU rRNA Methylase family ACX60_03895 PF01638 HxlR-like helix-turn-helix ACX60_03900 PF03358 NADPH-dependent FMN reductase ACX60_03905 PF13520 Amino acid permease ACX60_03910 PF00465 Iron-containing alcohol dehydrogenase ACX60_03920 PF03099 Biotin/lipoate A/B protein ligase family ACX60_03925 PF04359 Protein of unknown function (DUF493) ACX60_03930 PF00140 Sigma-70 factor, region 1.2 ACX60_03930 PF03979 Sigma-70 factor, region 1.1 ACX60_03930 PF04542 Sigma-70 region 2 ACX60_03930 PF04546 Sigma-70, non-essential region ACX60_03930 PF04545 Sigma-70, region 4 ACX60_03930 PF04539 Sigma-70 region 3 ACX60_03960 PF00285 Citrate synthase, C-terminal domain ACX60_03965 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACX60_03970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACX60_03975 PF00890 FAD binding domain ACX60_03975 PF02910 Fumarate reductase flavoprotein C-term ACX60_03980 PF13085 2Fe-2S iron-sulfur cluster binding domain ACX60_03985 PF02779 Transketolase, pyrimidine binding domain ACX60_03985 PF16870 2-oxoglutarate dehydrogenase C-terminal ACX60_03985 PF00676 Dehydrogenase E1 component ACX60_03985 PF16078 2-oxoglutarate dehydrogenase N-terminus ACX60_03990 PF00364 Biotin-requiring enzyme ACX60_03990 PF02817 e3 binding domain ACX60_03990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACX60_03995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACX60_03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_04000 PF08442 ATP-grasp domain ACX60_04000 PF00549 CoA-ligase ACX60_04005 PF00549 CoA-ligase ACX60_04005 PF02629 CoA binding domain ACX60_04010 PF00579 tRNA synthetases class I (W and Y) ACX60_04015 PF05661 Protein of unknown function (DUF808) ACX60_04020 PF04228 Putative neutral zinc metallopeptidase ACX60_04025 PF00999 Sodium/hydrogen exchanger family ACX60_04040 PF09587 Bacterial capsule synthesis protein PGA_cap ACX60_04050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACX60_04055 PF00582 Universal stress protein family ACX60_04060 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_04065 PF01042 Endoribonuclease L-PSP ACX60_04070 PF00440 Bacterial regulatory proteins, tetR family ACX60_04075 PF03449 Transcription elongation factor, N-terminal ACX60_04075 PF01272 Transcription elongation factor, GreA/GreB, C-term ACX60_04080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_04080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACX60_04080 PF02142 MGS-like domain ACX60_04085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACX60_04085 PF00117 Glutamine amidotransferase class-I ACX60_04100 PF01985 CRS1 / YhbY (CRM) domain ACX60_04105 PF01728 FtsJ-like methyltransferase ACX60_04110 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_04110 PF01434 Peptidase family M41 ACX60_04110 PF17862 AAA+ lid domain ACX60_04110 PF06480 FtsH Extracellular ACX60_04115 PF00809 Pterin binding enzyme ACX60_04135 PF16655 PhoD-like phosphatase, N-terminal domain ACX60_04135 PF09423 PhoD-like phosphatase ACX60_04150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACX60_04150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACX60_04165 PF00083 Sugar (and other) transporter ACX60_04170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACX60_04170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACX60_04175 PF01266 FAD dependent oxidoreductase ACX60_04175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACX60_04180 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ACX60_04180 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ACX60_04185 PF00781 Diacylglycerol kinase catalytic domain ACX60_04190 PF00149 Calcineurin-like phosphoesterase ACX60_04195 PF00166 Chaperonin 10 Kd subunit ACX60_04200 PF00118 TCP-1/cpn60 chaperonin family ACX60_04205 PF01219 Prokaryotic diacylglycerol kinase ACX60_04210 PF00753 Metallo-beta-lactamase superfamily ACX60_04215 PF03009 Glycerophosphoryl diester phosphodiesterase family ACX60_04220 PF00873 AcrB/AcrD/AcrF family ACX60_04230 PF01435 Peptidase family M48 ACX60_04235 PF01464 Transglycosylase SLT domain ACX60_04240 PF01171 PP-loop family ACX60_04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACX60_04250 PF01464 Transglycosylase SLT domain ACX60_04255 PF01272 Transcription elongation factor, GreA/GreB, C-term ACX60_04255 PF03449 Transcription elongation factor, N-terminal ACX60_04270 PF13193 AMP-binding enzyme C-terminal domain ACX60_04270 PF00501 AMP-binding enzyme ACX60_04270 PF00550 Phosphopantetheine attachment site ACX60_04270 PF00975 Thioesterase domain ACX60_04270 PF00668 Condensation domain ACX60_04280 PF09857 Putative toxin of bacterial toxin-antitoxin pair ACX60_04335 PF00881 Nitroreductase family ACX60_04350 PF02595 Glycerate kinase family ACX60_04355 PF00384 Molybdopterin oxidoreductase ACX60_04360 PF02634 FdhD/NarQ family ACX60_04365 PF06803 Protein of unknown function (DUF1232) ACX60_04370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACX60_04370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACX60_04370 PF11890 Domain of unknown function (DUF3410) ACX60_04375 PF00152 tRNA synthetases class II (D, K and N) ACX60_04385 PF18073 Rubredoxin metal binding domain ACX60_04390 PF00324 Amino acid permease ACX60_04400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACX60_04400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACX60_04405 PF01678 Diaminopimelate epimerase ACX60_04410 PF01810 LysE type translocator ACX60_04415 PF02899 Phage integrase, N-terminal SAM-like domain ACX60_04415 PF00589 Phage integrase family ACX60_04420 PF01012 Electron transfer flavoprotein domain ACX60_04425 PF01012 Electron transfer flavoprotein domain ACX60_04425 PF00766 Electron transfer flavoprotein FAD-binding domain ACX60_04430 PF03989 DNA gyrase C-terminal domain, beta-propeller ACX60_04430 PF00521 DNA gyrase/topoisomerase IV, subunit A ACX60_04445 PF00535 Glycosyl transferase family 2 ACX60_04465 PF13533 Biotin-lipoyl like ACX60_04475 PF00266 Aminotransferase class-V ACX60_04485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACX60_04495 PF12704 MacB-like periplasmic core domain ACX60_04495 PF02687 FtsX-like permease family ACX60_04500 PF00005 ABC transporter ACX60_04505 PF03772 Competence protein ACX60_04505 PF13567 Domain of unknown function (DUF4131) ACX60_04505 PF00753 Metallo-beta-lactamase superfamily ACX60_04515 PF06965 Na+/H+ antiporter 1 ACX60_04515 PF01343 Peptidase family S49 ACX60_04520 PF12697 Alpha/beta hydrolase family ACX60_04525 PF00551 Formyl transferase ACX60_04530 PF02769 AIR synthase related protein, C-terminal domain ACX60_04530 PF00586 AIR synthase related protein, N-terminal domain ACX60_04535 PF01594 AI-2E family transporter ACX60_04540 PF00308 Bacterial dnaA protein ACX60_04540 PF11638 DnaA N-terminal domain ACX60_04540 PF08299 Bacterial dnaA protein helix-turn-helix ACX60_04570 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACX60_04570 PF00588 SpoU rRNA Methylase family ACX60_04575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACX60_04585 PF00691 OmpA family ACX60_04590 PF07676 WD40-like Beta Propeller Repeat ACX60_04590 PF04052 TolB amino-terminal domain ACX60_04600 PF02472 Biopolymer transport protein ExbD/TolR ACX60_04605 PF01618 MotA/TolQ/ExbB proton channel family ACX60_04610 PF03061 Thioesterase superfamily ACX60_04615 PF01546 Peptidase family M20/M25/M40 ACX60_04615 PF07687 Peptidase dimerisation domain ACX60_04620 PF05491 RuvB C-terminal winged helix domain ACX60_04620 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACX60_04620 PF17864 RuvB AAA lid domain ACX60_04625 PF07499 RuvA, C-terminal domain ACX60_04625 PF01330 RuvA N terminal domain ACX60_04630 PF01966 HD domain ACX60_04635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACX60_04635 PF02769 AIR synthase related protein, C-terminal domain ACX60_04635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ACX60_04660 PF00425 chorismate binding enzyme ACX60_04670 PF00106 short chain dehydrogenase ACX60_04675 PF00668 Condensation domain ACX60_04675 PF00501 AMP-binding enzyme ACX60_04675 PF00550 Phosphopantetheine attachment site ACX60_04680 PF08242 Methyltransferase domain ACX60_04680 PF00668 Condensation domain ACX60_04680 PF00501 AMP-binding enzyme ACX60_04680 PF00550 Phosphopantetheine attachment site ACX60_04685 PF13193 AMP-binding enzyme C-terminal domain ACX60_04685 PF00501 AMP-binding enzyme ACX60_04685 PF00668 Condensation domain ACX60_04685 PF00550 Phosphopantetheine attachment site ACX60_04685 PF00975 Thioesterase domain ACX60_04690 PF13193 AMP-binding enzyme C-terminal domain ACX60_04690 PF00501 AMP-binding enzyme ACX60_04695 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACX60_04700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACX60_04700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACX60_04710 PF13340 Putative transposase of IS4/5 family (DUF4096) ACX60_04720 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ACX60_04720 PF01648 4'-phosphopantetheinyl transferase superfamily ACX60_04725 PF00975 Thioesterase domain ACX60_04730 PF07715 TonB-dependent Receptor Plug Domain ACX60_04730 PF00593 TonB dependent receptor ACX60_04745 PF01554 MatE ACX60_04750 PF00005 ABC transporter ACX60_04750 PF03412 Peptidase C39 family ACX60_04750 PF00664 ABC transporter transmembrane region ACX60_04780 PF00665 Integrase core domain ACX60_04780 PF13333 Integrase core domain ACX60_04780 PF13276 HTH-like domain ACX60_04795 PF13737 Transposase DDE domain ACX60_04805 PF11426 Tn7 transposition regulator TnsC ACX60_04805 PF13401 AAA domain ACX60_04810 PF00665 Integrase core domain ACX60_04815 PF08722 TnsA endonuclease N terminal ACX60_04815 PF08721 TnsA endonuclease C terminal ACX60_04825 PF01784 NIF3 (NGG1p interacting factor 3) ACX60_04830 PF00378 Enoyl-CoA hydratase/isomerase ACX60_04835 PF01467 Cytidylyltransferase-like ACX60_04835 PF00293 NUDIX domain ACX60_04845 PF00578 AhpC/TSA family ACX60_04860 PF06508 Queuosine biosynthesis protein QueC ACX60_04870 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ACX60_04870 PF14602 Hexapeptide repeat of succinyl-transferase ACX60_04870 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_04880 PF03466 LysR substrate binding domain ACX60_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_04885 PF12857 TOBE-like domain ACX60_04885 PF00005 ABC transporter ACX60_04890 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_04895 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_04910 PF01063 Amino-transferase class IV ACX60_04915 PF02618 YceG-like family ACX60_04920 PF02223 Thymidylate kinase ACX60_04930 PF02910 Fumarate reductase flavoprotein C-term ACX60_04930 PF00890 FAD binding domain ACX60_04935 PF13180 PDZ domain ACX60_04945 PF13302 Acetyltransferase (GNAT) domain ACX60_04950 PF03144 Elongation factor Tu domain 2 ACX60_04950 PF00009 Elongation factor Tu GTP binding domain ACX60_04950 PF00679 Elongation factor G C-terminus ACX60_04950 PF06421 GTP-binding protein LepA C-terminus ACX60_04955 PF10502 Signal peptidase, peptidase S26 ACX60_04965 PF00035 Double-stranded RNA binding motif ACX60_04965 PF14622 Ribonuclease-III-like ACX60_04970 PF07650 KH domain ACX60_04970 PF01926 50S ribosome-binding GTPase ACX60_04980 PF02565 Recombination protein O C terminal ACX60_04980 PF11967 Recombination protein O N terminal ACX60_04985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACX60_04990 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ACX60_04995 PF00106 short chain dehydrogenase ACX60_05020 PF00012 Hsp70 protein ACX60_05040 PF00990 Diguanylate cyclase, GGDEF domain ACX60_05040 PF17151 Periplasmic sensor domain ACX60_05050 PF04851 Type III restriction enzyme, res subunit ACX60_05050 PF02151 UvrB/uvrC motif ACX60_05050 PF12344 Ultra-violet resistance protein B ACX60_05050 PF00271 Helicase conserved C-terminal domain ACX60_05050 PF17757 UvrB interaction domain ACX60_05060 PF00892 EamA-like transporter family ACX60_05065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACX60_05065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACX60_05080 PF01018 GTP1/OBG ACX60_05080 PF01926 50S ribosome-binding GTPase ACX60_05085 PF00696 Amino acid kinase family ACX60_05085 PF01472 PUA domain ACX60_05095 PF07759 Protein of unknown function (DUF1615) ACX60_05100 PF01207 Dihydrouridine synthase (Dus) ACX60_05105 PF03060 Nitronate monooxygenase ACX60_05150 PF00875 DNA photolyase ACX60_05150 PF03441 FAD binding domain of DNA photolyase ACX60_05155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_05165 PF07943 Penicillin-binding protein 5, C-terminal domain ACX60_05165 PF00768 D-alanyl-D-alanine carboxypeptidase ACX60_05175 PF03971 Monomeric isocitrate dehydrogenase ACX60_05180 PF00849 RNA pseudouridylate synthase ACX60_05185 PF00180 Isocitrate/isopropylmalate dehydrogenase ACX60_05200 PF06779 Uncharacterised MFS-type transporter YbfB ACX60_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_05205 PF03466 LysR substrate binding domain ACX60_05215 PF02567 Phenazine biosynthesis-like protein ACX60_05220 PF05193 Peptidase M16 inactive domain ACX60_05220 PF00675 Insulinase (Peptidase family M16) ACX60_05245 PF02581 Thiamine monophosphate synthase ACX60_05250 PF00202 Aminotransferase class-III ACX60_05260 PF00849 RNA pseudouridylate synthase ACX60_05265 PF12137 RNA polymerase recycling family C-terminal ACX60_05265 PF00271 Helicase conserved C-terminal domain ACX60_05265 PF18337 RapA N-terminal Tudor like domain ACX60_05265 PF00176 SNF2 family N-terminal domain ACX60_05265 PF18339 RapA N-terminal Tudor like domain 1 ACX60_05275 PF00440 Bacterial regulatory proteins, tetR family ACX60_05280 PF00175 Oxidoreductase NAD-binding domain ACX60_05280 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_05280 PF00970 Oxidoreductase FAD-binding domain ACX60_05285 PF00487 Fatty acid desaturase ACX60_05290 PF02525 Flavodoxin-like fold ACX60_05305 PF00202 Aminotransferase class-III ACX60_05310 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACX60_05315 PF00171 Aldehyde dehydrogenase family ACX60_05320 PF01037 Lrp/AsnC ligand binding domain ACX60_05325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACX60_05325 PF00205 Thiamine pyrophosphate enzyme, central domain ACX60_05325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACX60_05330 PF00324 Amino acid permease ACX60_05335 PF12849 PBP superfamily domain ACX60_05340 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_05345 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_05350 PF00005 ABC transporter ACX60_05355 PF08496 Peptidase family S49 N-terminal ACX60_05355 PF01343 Peptidase family S49 ACX60_05370 PF00206 Lyase ACX60_05370 PF08328 Adenylosuccinate lyase C-terminal ACX60_05375 PF04356 Protein of unknown function (DUF489) ACX60_05390 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_05395 PF07943 Penicillin-binding protein 5, C-terminal domain ACX60_05395 PF00768 D-alanyl-D-alanine carboxypeptidase ACX60_05410 PF01975 Survival protein SurE ACX60_05415 PF01476 LysM domain ACX60_05415 PF01551 Peptidase family M23 ACX60_05420 PF03466 LysR substrate binding domain ACX60_05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_05425 PF13654 AAA domain ACX60_05425 PF05362 Lon protease (S16) C-terminal proteolytic domain ACX60_05430 PF07690 Major Facilitator Superfamily ACX60_05435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACX60_05440 PF13593 SBF-like CPA transporter family (DUF4137) ACX60_05445 PF01197 Ribosomal protein L31 ACX60_05450 PF00563 EAL domain ACX60_05450 PF12792 CSS motif domain associated with EAL ACX60_05460 PF04055 Radical SAM superfamily ACX60_05465 PF01132 Elongation factor P (EF-P) OB domain ACX60_05465 PF08207 Elongation factor P (EF-P) KOW-like domain ACX60_05465 PF09285 Elongation factor P, C-terminal ACX60_05470 PF02554 Carbon starvation protein CstA ACX60_05470 PF13722 5TM C-terminal transporter carbon starvation CstA ACX60_05475 PF04328 Selenoprotein, putative ACX60_05515 PF00857 Isochorismatase family ACX60_05520 PF03466 LysR substrate binding domain ACX60_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_05530 PF00743 Flavin-binding monooxygenase-like ACX60_05535 PF00561 alpha/beta hydrolase fold ACX60_05545 PF01370 NAD dependent epimerase/dehydratase family ACX60_05550 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACX60_05550 PF12833 Helix-turn-helix domain ACX60_05575 PF02678 Pirin ACX60_05575 PF17954 Quercetinase C-terminal cupin domain ACX60_05580 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_05585 PF08348 YheO-like PAS domain ACX60_05585 PF13309 HTH domain ACX60_05595 PF00550 Phosphopantetheine attachment site ACX60_05595 PF13193 AMP-binding enzyme C-terminal domain ACX60_05595 PF00501 AMP-binding enzyme ACX60_05595 PF00668 Condensation domain ACX60_05600 PF13193 AMP-binding enzyme C-terminal domain ACX60_05600 PF00668 Condensation domain ACX60_05600 PF00975 Thioesterase domain ACX60_05600 PF00550 Phosphopantetheine attachment site ACX60_05600 PF00501 AMP-binding enzyme ACX60_05605 PF01032 FecCD transport family ACX60_05610 PF01032 FecCD transport family ACX60_05615 PF00005 ABC transporter ACX60_05620 PF01497 Periplasmic binding protein ACX60_05625 PF07715 TonB-dependent Receptor Plug Domain ACX60_05625 PF00593 TonB dependent receptor ACX60_05630 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACX60_05635 PF00668 Condensation domain ACX60_05635 PF00550 Phosphopantetheine attachment site ACX60_05635 PF00501 AMP-binding enzyme ACX60_05640 PF13193 AMP-binding enzyme C-terminal domain ACX60_05640 PF00501 AMP-binding enzyme ACX60_05645 PF00857 Isochorismatase family ACX60_05645 PF00550 Phosphopantetheine attachment site ACX60_05650 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACX60_05660 PF00005 ABC transporter ACX60_05660 PF00664 ABC transporter transmembrane region ACX60_05665 PF00005 ABC transporter ACX60_05665 PF00664 ABC transporter transmembrane region ACX60_05670 PF00975 Thioesterase domain ACX60_05680 PF00425 chorismate binding enzyme ACX60_05690 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACX60_05695 PF05675 Protein of unknown function (DUF817) ACX60_05710 PF00144 Beta-lactamase ACX60_05720 PF01799 [2Fe-2S] binding domain ACX60_05720 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_05725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ACX60_05725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACX60_05740 PF00218 Indole-3-glycerol phosphate synthase ACX60_05745 PF02885 Glycosyl transferase family, helical bundle domain ACX60_05745 PF00591 Glycosyl transferase family, a/b domain ACX60_05750 PF00593 TonB dependent receptor ACX60_05750 PF07715 TonB-dependent Receptor Plug Domain ACX60_05755 PF11838 ERAP1-like C-terminal domain ACX60_05755 PF01433 Peptidase family M1 domain ACX60_05760 PF00117 Glutamine amidotransferase class-I ACX60_05770 PF00854 POT family ACX60_05780 PF04345 Chorismate lyase ACX60_05785 PF01040 UbiA prenyltransferase family ACX60_05820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACX60_05820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACX60_05825 PF01784 NIF3 (NGG1p interacting factor 3) ACX60_05830 PF13180 PDZ domain ACX60_05835 PF12627 Probable RNA and SrmB- binding site of polymerase A ACX60_05835 PF01743 Poly A polymerase head domain ACX60_05840 PF00390 Malic enzyme, N-terminal domain ACX60_05840 PF01515 Phosphate acetyl/butaryl transferase ACX60_05840 PF03949 Malic enzyme, NAD binding domain ACX60_05845 PF03707 Bacterial signalling protein N terminal repeat ACX60_05845 PF00990 Diguanylate cyclase, GGDEF domain ACX60_05845 PF00563 EAL domain ACX60_05850 PF04452 RNA methyltransferase ACX60_05855 PF02219 Methylenetetrahydrofolate reductase ACX60_05860 PF05221 S-adenosyl-L-homocysteine hydrolase ACX60_05860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACX60_05875 PF09317 Domain of unknown function (DUF1974) ACX60_05875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_05875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_05880 PF04055 Radical SAM superfamily ACX60_05885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACX60_05885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_05900 PF07690 Major Facilitator Superfamily ACX60_05910 PF00557 Metallopeptidase family M24 ACX60_05915 PF00318 Ribosomal protein S2 ACX60_05920 PF00889 Elongation factor TS ACX60_05930 PF12833 Helix-turn-helix domain ACX60_05950 PF05036 Sporulation related domain ACX60_05950 PF03330 Lytic transglycolase ACX60_05955 PF13406 Transglycosylase SLT domain ACX60_05960 PF01098 Cell cycle protein ACX60_05970 PF14489 QueF-like protein ACX60_05970 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ACX60_05975 PF01061 ABC-2 type transporter ACX60_05980 PF00005 ABC transporter ACX60_06005 PF00464 Serine hydroxymethyltransferase ACX60_06010 PF02321 Outer membrane efflux protein ACX60_06015 PF00873 AcrB/AcrD/AcrF family ACX60_06020 PF13533 Biotin-lipoyl like ACX60_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_06025 PF03466 LysR substrate binding domain ACX60_06030 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACX60_06035 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_06040 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_06045 PF00005 ABC transporter ACX60_06050 PF00893 Small Multidrug Resistance protein ACX60_06055 PF00037 4Fe-4S binding domain ACX60_06065 PF00155 Aminotransferase class I and II ACX60_06065 PF00392 Bacterial regulatory proteins, gntR family ACX60_06070 PF02567 Phenazine biosynthesis-like protein ACX60_06075 PF00175 Oxidoreductase NAD-binding domain ACX60_06075 PF00970 Oxidoreductase FAD-binding domain ACX60_06080 PF01980 tRNA-methyltransferase O ACX60_06080 PF18389 TrmO C-terminal domain ACX60_06090 PF00437 Type II/IV secretion system protein ACX60_06100 PF00486 Transcriptional regulatory protein, C terminal ACX60_06100 PF00072 Response regulator receiver domain ACX60_06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_06105 PF08521 Two-component sensor kinase N-terminal ACX60_06105 PF00512 His Kinase A (phospho-acceptor) domain ACX60_06115 PF00293 NUDIX domain ACX60_06125 PF14814 Bifunctional transglycosylase second domain ACX60_06125 PF00905 Penicillin binding protein transpeptidase domain ACX60_06125 PF00912 Transglycosylase ACX60_06130 PF01513 ATP-NAD kinase ACX60_06135 PF07023 Protein of unknown function (DUF1315) ACX60_06140 PF02885 Glycosyl transferase family, helical bundle domain ACX60_06140 PF00591 Glycosyl transferase family, a/b domain ACX60_06145 PF00375 Sodium:dicarboxylate symporter family ACX60_06150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_06150 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_06150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_06155 PF00756 Putative esterase ACX60_06160 PF00800 Prephenate dehydratase ACX60_06160 PF01842 ACT domain ACX60_06160 PF01817 Chorismate mutase type II ACX60_06165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACX60_06175 PF07687 Peptidase dimerisation domain ACX60_06175 PF01546 Peptidase family M20/M25/M40 ACX60_06180 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ACX60_06180 PF01137 RNA 3'-terminal phosphate cyclase ACX60_06195 PF01139 tRNA-splicing ligase RtcB ACX60_06200 PF00753 Metallo-beta-lactamase superfamily ACX60_06205 PF00158 Sigma-54 interaction domain ACX60_06205 PF06956 Regulator of RNA terminal phosphate cyclase ACX60_06215 PF03883 Peroxide stress protein YaaA ACX60_06225 PF05690 Thiazole biosynthesis protein ThiG ACX60_06235 PF04241 Protein of unknown function (DUF423) ACX60_06240 PF04545 Sigma-70, region 4 ACX60_06240 PF00140 Sigma-70 factor, region 1.2 ACX60_06240 PF04542 Sigma-70 region 2 ACX60_06250 PF00313 'Cold-shock' DNA-binding domain ACX60_06255 PF00271 Helicase conserved C-terminal domain ACX60_06255 PF00270 DEAD/DEAH box helicase ACX60_06265 PF00881 Nitroreductase family ACX60_06270 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACX60_06270 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACX60_06290 PF01180 Dihydroorotate dehydrogenase ACX60_06295 PF02674 Colicin V production protein ACX60_06300 PF00156 Phosphoribosyl transferase domain ACX60_06315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACX60_06315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACX60_06320 PF01435 Peptidase family M48 ACX60_06325 PF09424 Yqey-like protein ACX60_06330 PF01165 Ribosomal protein S21 ACX60_06335 PF00814 Glycoprotease family ACX60_06355 PF03793 PASTA domain ACX60_06355 PF00069 Protein kinase domain ACX60_06380 PF03466 LysR substrate binding domain ACX60_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_06385 PF00202 Aminotransferase class-III ACX60_06390 PF00171 Aldehyde dehydrogenase family ACX60_06395 PF00324 Amino acid permease ACX60_06425 PF04076 Bacterial OB fold (BOF) protein ACX60_06450 PF00561 alpha/beta hydrolase fold ACX60_06455 PF03616 Sodium/glutamate symporter ACX60_06465 PF00392 Bacterial regulatory proteins, gntR family ACX60_06465 PF07729 FCD domain ACX60_06515 PF00083 Sugar (and other) transporter ACX60_06515 PF08946 Osmosensory transporter coiled coil ACX60_06520 PF00293 NUDIX domain ACX60_06550 PF04403 Paraquat-inducible protein A ACX60_06555 PF02470 MlaD protein ACX60_06570 PF01177 Asp/Glu/Hydantoin racemase ACX60_06575 PF00892 EamA-like transporter family ACX60_06580 PF07995 Glucose / Sorbosone dehydrogenase ACX60_06600 PF00375 Sodium:dicarboxylate symporter family ACX60_06610 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACX60_06610 PF00753 Metallo-beta-lactamase superfamily ACX60_06615 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_06620 PF00005 ABC transporter ACX60_06620 PF09383 NIL domain ACX60_06625 PF03180 NLPA lipoprotein ACX60_06630 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACX60_06630 PF02844 Phosphoribosylglycinamide synthetase, N domain ACX60_06630 PF02843 Phosphoribosylglycinamide synthetase, C domain ACX60_06635 PF02142 MGS-like domain ACX60_06635 PF01808 AICARFT/IMPCHase bienzyme ACX60_06640 PF02954 Bacterial regulatory protein, Fis family ACX60_06660 PF13932 GidA associated domain ACX60_06660 PF01134 Glucose inhibited division protein A ACX60_06670 PF14403 Circularly permuted ATP-grasp type 2 ACX60_06680 PF08379 Bacterial transglutaminase-like N-terminal region ACX60_06680 PF01841 Transglutaminase-like superfamily ACX60_06690 PF00842 Alanine racemase, C-terminal domain ACX60_06690 PF01168 Alanine racemase, N-terminal domain ACX60_06695 PF00772 DnaB-like helicase N terminal domain ACX60_06695 PF03796 DnaB-like helicase C terminal domain ACX60_06700 PF03948 Ribosomal protein L9, C-terminal domain ACX60_06700 PF01281 Ribosomal protein L9, N-terminal domain ACX60_06705 PF01084 Ribosomal protein S18 ACX60_06710 PF01250 Ribosomal protein S6 ACX60_06715 PF01040 UbiA prenyltransferase family ACX60_06720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACX60_06725 PF00510 Cytochrome c oxidase subunit III ACX60_06730 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACX60_06735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACX60_06735 PF06481 COX Aromatic Rich Motif ACX60_06745 PF02896 PEP-utilising enzyme, TIM barrel domain ACX60_06745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACX60_06745 PF00391 PEP-utilising enzyme, mobile domain ACX60_06750 PF03618 Kinase/pyrophosphorylase ACX60_06760 PF14883 Hypothetical glycosyl hydrolase family 13 ACX60_06760 PF01522 Polysaccharide deacetylase ACX60_06765 PF00535 Glycosyl transferase family 2 ACX60_06770 PF13994 PgaD-like protein ACX60_06780 PF00296 Luciferase-like monooxygenase ACX60_06795 PF03466 LysR substrate binding domain ACX60_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_06805 PF00472 RF-1 domain ACX60_06805 PF03462 PCRF domain ACX60_06810 PF13847 Methyltransferase domain ACX60_06810 PF17827 PrmC N-terminal domain ACX60_06815 PF12833 Helix-turn-helix domain ACX60_06820 PF00106 short chain dehydrogenase ACX60_06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_06825 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_06830 PF00501 AMP-binding enzyme ACX60_06830 PF13193 AMP-binding enzyme C-terminal domain ACX60_06835 PF01613 Flavin reductase like domain ACX60_06840 PF00899 ThiF family ACX60_06845 PF03109 ABC1 family ACX60_06850 PF02152 Dihydroneopterin aldolase ACX60_06860 PF03814 Potassium-transporting ATPase A subunit ACX60_06870 PF02669 K+-transporting ATPase, c chain ACX60_06875 PF02702 Osmosensitive K+ channel His kinase sensor domain ACX60_06875 PF13493 Domain of unknown function (DUF4118) ACX60_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_06875 PF00512 His Kinase A (phospho-acceptor) domain ACX60_06880 PF00072 Response regulator receiver domain ACX60_06880 PF00486 Transcriptional regulatory protein, C terminal ACX60_06885 PF00120 Glutamine synthetase, catalytic domain ACX60_06895 PF03232 Ubiquinone biosynthesis protein COQ7 ACX60_06900 PF07690 Major Facilitator Superfamily ACX60_06905 PF07244 Surface antigen variable number repeat ACX60_06905 PF17243 POTRA domain TamA domain 1 ACX60_06905 PF01103 Surface antigen ACX60_06920 PF11791 Aconitate B N-terminal domain ACX60_06920 PF06434 Aconitate hydratase 2 N-terminus ACX60_06920 PF00330 Aconitase family (aconitate hydratase) ACX60_06930 PF00520 Ion transport protein ACX60_06930 PF00027 Cyclic nucleotide-binding domain ACX60_06935 PF07690 Major Facilitator Superfamily ACX60_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_06950 PF03466 LysR substrate binding domain ACX60_06955 PF04284 Protein of unknown function (DUF441) ACX60_06965 PF01479 S4 domain ACX60_06965 PF00849 RNA pseudouridylate synthase ACX60_06980 PF01479 S4 domain ACX60_06980 PF00849 RNA pseudouridylate synthase ACX60_06985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACX60_06990 PF01119 DNA mismatch repair protein, C-terminal domain ACX60_06990 PF08676 MutL C terminal dimerisation domain ACX60_07000 PF17209 Hfq protein ACX60_07010 PF00881 Nitroreductase family ACX60_07020 PF00149 Calcineurin-like phosphoesterase ACX60_07025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACX60_07030 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACX60_07030 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACX60_07035 PF02540 NAD synthase ACX60_07035 PF00117 Glutamine amidotransferase class-I ACX60_07035 PF00958 GMP synthase C terminal domain ACX60_07040 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ACX60_07045 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ACX60_07050 PF13520 Amino acid permease ACX60_07055 PF00171 Aldehyde dehydrogenase family ACX60_07070 PF00465 Iron-containing alcohol dehydrogenase ACX60_07075 PF05970 PIF1-like helicase ACX60_07075 PF14493 Helix-turn-helix domain ACX60_07085 PF02110 Hydroxyethylthiazole kinase family ACX60_07100 PF01433 Peptidase family M1 domain ACX60_07100 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ACX60_07100 PF11940 Domain of unknown function (DUF3458) Ig-like fold ACX60_07115 PF13954 PapC N-terminal domain ACX60_07115 PF00577 Outer membrane usher protein ACX60_07115 PF13953 PapC C-terminal domain ACX60_07140 PF01817 Chorismate mutase type II ACX60_07145 PF01037 Lrp/AsnC ligand binding domain ACX60_07155 PF00440 Bacterial regulatory proteins, tetR family ACX60_07160 PF07715 TonB-dependent Receptor Plug Domain ACX60_07160 PF00593 TonB dependent receptor ACX60_07165 PF00924 Mechanosensitive ion channel ACX60_07195 PF07715 TonB-dependent Receptor Plug Domain ACX60_07195 PF00593 TonB dependent receptor ACX60_07215 PF12848 ABC transporter ACX60_07215 PF00005 ABC transporter ACX60_07220 PF00582 Universal stress protein family ACX60_07240 PF00689 Cation transporting ATPase, C-terminus ACX60_07240 PF00690 Cation transporter/ATPase, N-terminus ACX60_07245 PF02308 MgtC family ACX60_07250 PF03594 Benzoate membrane transport protein ACX60_07255 PF01037 Lrp/AsnC ligand binding domain ACX60_07260 PF01810 LysE type translocator ACX60_07270 PF03466 LysR substrate binding domain ACX60_07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_07280 PF00108 Thiolase, N-terminal domain ACX60_07280 PF02803 Thiolase, C-terminal domain ACX60_07305 PF07690 Major Facilitator Superfamily ACX60_07310 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACX60_07310 PF12170 DNA polymerase III tau subunit V interacting with alpha ACX60_07310 PF12169 DNA polymerase III subunits gamma and tau domain III ACX60_07315 PF05506 Domain of unknown function (DUF756) ACX60_07315 PF04185 Phosphoesterase family ACX60_07320 PF03061 Thioesterase superfamily ACX60_07325 PF00465 Iron-containing alcohol dehydrogenase ACX60_07335 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACX60_07340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACX60_07340 PF01565 FAD binding domain ACX60_07355 PF01645 Conserved region in glutamate synthase ACX60_07455 PF00145 C-5 cytosine-specific DNA methylase ACX60_07500 PF02498 BRO family, N-terminal domain ACX60_07500 PF10548 P22AR C-terminal domain ACX60_07640 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ACX60_07700 PF00817 impB/mucB/samB family ACX60_07700 PF11798 IMS family HHH motif ACX60_07700 PF11799 impB/mucB/samB family C-terminal domain ACX60_07700 PF13438 Domain of unknown function (DUF4113) ACX60_07715 PF12832 MFS_1 like family ACX60_07725 PF00289 Biotin carboxylase, N-terminal domain ACX60_07725 PF02785 Biotin carboxylase C-terminal domain ACX60_07725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_07730 PF00364 Biotin-requiring enzyme ACX60_07735 PF01220 Dehydroquinase class II ACX60_07740 PF00817 impB/mucB/samB family ACX60_07740 PF13438 Domain of unknown function (DUF4113) ACX60_07740 PF11799 impB/mucB/samB family C-terminal domain ACX60_07745 PF00005 ABC transporter ACX60_07750 PF00072 Response regulator receiver domain ACX60_07750 PF00486 Transcriptional regulatory protein, C terminal ACX60_07760 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACX60_07760 PF04324 BFD-like [2Fe-2S] binding domain ACX60_07760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACX60_07760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACX60_07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_07760 PF13806 Rieske-like [2Fe-2S] domain ACX60_07765 PF04324 BFD-like [2Fe-2S] binding domain ACX60_07765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACX60_07765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACX60_07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_07765 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACX60_07770 PF01568 Molydopterin dinucleotide binding domain ACX60_07770 PF00384 Molybdopterin oxidoreductase ACX60_07770 PF04324 BFD-like [2Fe-2S] binding domain ACX60_07770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACX60_07775 PF12804 MobA-like NTP transferase domain ACX60_07780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACX60_07780 PF00384 Molybdopterin oxidoreductase ACX60_07780 PF01568 Molydopterin dinucleotide binding domain ACX60_07785 PF04055 Radical SAM superfamily ACX60_07785 PF06463 Molybdenum Cofactor Synthesis C ACX60_07795 PF02391 MoaE protein ACX60_07800 PF00994 Probable molybdopterin binding domain ACX60_07800 PF01967 MoaC family ACX60_07805 PF03454 MoeA C-terminal region (domain IV) ACX60_07805 PF00994 Probable molybdopterin binding domain ACX60_07805 PF03453 MoeA N-terminal region (domain I and II) ACX60_07810 PF01638 HxlR-like helix-turn-helix ACX60_07815 PF00155 Aminotransferase class I and II ACX60_07815 PF00392 Bacterial regulatory proteins, gntR family ACX60_07820 PF00892 EamA-like transporter family ACX60_07840 PF02635 DsrE/DsrF-like family ACX60_07845 PF16363 GDP-mannose 4,6 dehydratase ACX60_07850 PF00206 Lyase ACX60_07850 PF10415 Fumarase C C-terminus ACX60_07870 PF01266 FAD dependent oxidoreductase ACX60_07880 PF02542 YgbB family ACX60_07890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACX60_07890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACX60_07895 PF00440 Bacterial regulatory proteins, tetR family ACX60_07900 PF00158 Sigma-54 interaction domain ACX60_07900 PF00072 Response regulator receiver domain ACX60_07900 PF02954 Bacterial regulatory protein, Fis family ACX60_07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_07905 PF00989 PAS fold ACX60_07905 PF00512 His Kinase A (phospho-acceptor) domain ACX60_07910 PF18693 TRAM domain ACX60_07910 PF00919 Uncharacterized protein family UPF0004 ACX60_07910 PF04055 Radical SAM superfamily ACX60_07915 PF00696 Amino acid kinase family ACX60_07920 PF01765 Ribosome recycling factor ACX60_07925 PF01255 Putative undecaprenyl diphosphate synthase ACX60_07935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACX60_07935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACX60_07935 PF13288 DXP reductoisomerase C-terminal domain ACX60_07940 PF02163 Peptidase family M50 ACX60_07940 PF17820 PDZ domain ACX60_07940 PF13180 PDZ domain ACX60_07945 PF07244 Surface antigen variable number repeat ACX60_07945 PF01103 Surface antigen ACX60_07955 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_07955 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACX60_07960 PF07977 FabA-like domain ACX60_07965 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_07965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACX60_07975 PF02631 RecX family ACX60_07980 PF00154 recA bacterial DNA recombination protein ACX60_07985 PF01479 S4 domain ACX60_07990 PF13419 Haloacid dehalogenase-like hydrolase ACX60_08015 PF01037 Lrp/AsnC ligand binding domain ACX60_08020 PF00266 Aminotransferase class-V ACX60_08025 PF00324 Amino acid permease ACX60_08035 PF05922 Peptidase inhibitor I9 ACX60_08035 PF00082 Subtilase family ACX60_08040 PF01740 STAS domain ACX60_08040 PF00916 Sulfate permease family ACX60_08045 PF02586 SOS response associated peptidase (SRAP) ACX60_08050 PF07995 Glucose / Sorbosone dehydrogenase ACX60_08060 PF00563 EAL domain ACX60_08060 PF00990 Diguanylate cyclase, GGDEF domain ACX60_08060 PF03707 Bacterial signalling protein N terminal repeat ACX60_08075 PF02378 Phosphotransferase system, EIIC ACX60_08075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACX60_08080 PF00294 pfkB family carbohydrate kinase ACX60_08085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACX60_08085 PF00381 PTS HPr component phosphorylation site ACX60_08085 PF05524 PEP-utilising enzyme, N-terminal ACX60_08085 PF00391 PEP-utilising enzyme, mobile domain ACX60_08085 PF02896 PEP-utilising enzyme, TIM barrel domain ACX60_08110 PF05525 Branched-chain amino acid transport protein ACX60_08115 PF00557 Metallopeptidase family M24 ACX60_08120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08120 PF03466 LysR substrate binding domain ACX60_08130 PF00462 Glutaredoxin ACX60_08135 PF00202 Aminotransferase class-III ACX60_08140 PF00478 IMP dehydrogenase / GMP reductase domain ACX60_08140 PF00571 CBS domain ACX60_08165 PF02881 SRP54-type protein, helical bundle domain ACX60_08165 PF00448 SRP54-type protein, GTPase domain ACX60_08175 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ACX60_08190 PF08173 Membrane bound YbgT-like protein ACX60_08195 PF02322 Cytochrome bd terminal oxidase subunit II ACX60_08200 PF01654 Cytochrome bd terminal oxidase subunit I ACX60_08210 PF07290 Protein of unknown function (DUF1449) ACX60_08220 PF00294 pfkB family carbohydrate kinase ACX60_08225 PF00593 TonB dependent receptor ACX60_08225 PF07715 TonB-dependent Receptor Plug Domain ACX60_08230 PF05193 Peptidase M16 inactive domain ACX60_08230 PF00675 Insulinase (Peptidase family M16) ACX60_08230 PF08367 Peptidase M16C associated ACX60_08235 PF02253 Phospholipase A1 ACX60_08240 PF02386 Cation transport protein ACX60_08245 PF02080 TrkA-C domain ACX60_08245 PF02254 TrkA-N domain ACX60_08250 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_08250 PF00585 C-terminal regulatory domain of Threonine dehydratase ACX60_08255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACX60_08270 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACX60_08270 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACX60_08280 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACX60_08285 PF10431 C-terminal, D2-small domain, of ClpB protein ACX60_08285 PF02861 Clp amino terminal domain, pathogenicity island component ACX60_08285 PF07724 AAA domain (Cdc48 subfamily) ACX60_08285 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_08285 PF17871 AAA lid domain ACX60_08290 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACX60_08295 PF00793 DAHP synthetase I family ACX60_08310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_08310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_08340 PF06418 CTP synthase N-terminus ACX60_08340 PF00117 Glutamine amidotransferase class-I ACX60_08345 PF00793 DAHP synthetase I family ACX60_08350 PF03952 Enolase, N-terminal domain ACX60_08350 PF00113 Enolase, C-terminal TIM barrel domain ACX60_08355 PF04239 Protein of unknown function (DUF421) ACX60_08360 PF04977 Septum formation initiator ACX60_08365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACX60_08370 PF01144 Coenzyme A transferase ACX60_08375 PF01144 Coenzyme A transferase ACX60_08380 PF00108 Thiolase, N-terminal domain ACX60_08380 PF02803 Thiolase, C-terminal domain ACX60_08385 PF10397 Adenylosuccinate lyase C-terminus ACX60_08385 PF00206 Lyase ACX60_08390 PF00561 alpha/beta hydrolase fold ACX60_08395 PF07690 Major Facilitator Superfamily ACX60_08400 PF02627 Carboxymuconolactone decarboxylase family ACX60_08405 PF00775 Dioxygenase ACX60_08405 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACX60_08410 PF00775 Dioxygenase ACX60_08415 PF01487 Type I 3-dehydroquinase ACX60_08420 PF05048 Periplasmic copper-binding protein (NosD) ACX60_08425 PF04966 Carbohydrate-selective porin, OprB family ACX60_08430 PF13360 PQQ-like domain ACX60_08430 PF01011 PQQ enzyme repeat ACX60_08440 PF04143 Sulphur transport ACX60_08450 PF00753 Metallo-beta-lactamase superfamily ACX60_08455 PF09339 IclR helix-turn-helix domain ACX60_08455 PF01614 Bacterial transcriptional regulator ACX60_08460 PF03466 LysR substrate binding domain ACX60_08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_08465 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_08465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_08480 PF00106 short chain dehydrogenase ACX60_08490 PF07690 Major Facilitator Superfamily ACX60_08500 PF01425 Amidase ACX60_08505 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACX60_08520 PF00355 Rieske [2Fe-2S] domain ACX60_08520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACX60_08535 PF00175 Oxidoreductase NAD-binding domain ACX60_08535 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_08540 PF01613 Flavin reductase like domain ACX60_08545 PF02311 AraC-like ligand binding domain ACX60_08545 PF12833 Helix-turn-helix domain ACX60_08550 PF02728 Copper amine oxidase, N3 domain ACX60_08550 PF02727 Copper amine oxidase, N2 domain ACX60_08550 PF07833 Copper amine oxidase N-terminal domain ACX60_08550 PF01179 Copper amine oxidase, enzyme domain ACX60_08560 PF00171 Aldehyde dehydrogenase family ACX60_08565 PF01804 Penicillin amidase ACX60_08570 PF12146 Serine aminopeptidase, S33 ACX60_08575 PF02803 Thiolase, C-terminal domain ACX60_08575 PF00108 Thiolase, N-terminal domain ACX60_08580 PF01144 Coenzyme A transferase ACX60_08585 PF01144 Coenzyme A transferase ACX60_08590 PF00775 Dioxygenase ACX60_08590 PF04444 Catechol dioxygenase N terminus ACX60_08595 PF02426 Muconolactone delta-isomerase ACX60_08600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACX60_08600 PF13378 Enolase C-terminal domain-like ACX60_08605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08605 PF03466 LysR substrate binding domain ACX60_08615 PF00392 Bacterial regulatory proteins, gntR family ACX60_08615 PF07729 FCD domain ACX60_08620 PF00920 Dehydratase family ACX60_08625 PF07690 Major Facilitator Superfamily ACX60_08635 PF00171 Aldehyde dehydrogenase family ACX60_08645 PF00561 alpha/beta hydrolase fold ACX60_08650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_08650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_08655 PF00106 short chain dehydrogenase ACX60_08660 PF01872 RibD C-terminal domain ACX60_08670 PF13411 MerR HTH family regulatory protein ACX60_08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_08690 PF12706 Beta-lactamase superfamily domain ACX60_08695 PF00440 Bacterial regulatory proteins, tetR family ACX60_08695 PF08359 YsiA-like protein, C-terminal region ACX60_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08700 PF03466 LysR substrate binding domain ACX60_08715 PF00106 short chain dehydrogenase ACX60_08720 PF01575 MaoC like domain ACX60_08725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_08725 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACX60_08725 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_08725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_08735 PF00501 AMP-binding enzyme ACX60_08735 PF13193 AMP-binding enzyme C-terminal domain ACX60_08800 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ACX60_08805 PF07690 Major Facilitator Superfamily ACX60_08810 PF04909 Amidohydrolase ACX60_08825 PF08450 SMP-30/Gluconolactonase/LRE-like region ACX60_08835 PF03466 LysR substrate binding domain ACX60_08835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_08850 PF00529 HlyD membrane-fusion protein of T1SS ACX60_08865 PF00171 Aldehyde dehydrogenase family ACX60_08870 PF00920 Dehydratase family ACX60_08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_08880 PF03466 LysR substrate binding domain ACX60_08885 PF01370 NAD dependent epimerase/dehydratase family ACX60_08890 PF07690 Major Facilitator Superfamily ACX60_08895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACX60_08895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACX60_08900 PF12833 Helix-turn-helix domain ACX60_08900 PF06719 AraC-type transcriptional regulator N-terminus ACX60_08905 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_08905 PF00107 Zinc-binding dehydrogenase ACX60_08920 PF00005 ABC transporter ACX60_08940 PF14572 Phosphoribosyl synthetase-associated domain ACX60_08940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACX60_08945 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACX60_08975 PF03472 Autoinducer binding domain ACX60_08975 PF00196 Bacterial regulatory proteins, luxR family ACX60_08980 PF01425 Amidase ACX60_08990 PF07690 Major Facilitator Superfamily ACX60_09015 PF01975 Survival protein SurE ACX60_09025 PF02824 TGS domain ACX60_09025 PF04607 Region found in RelA / SpoT proteins ACX60_09025 PF13291 ACT domain ACX60_09050 PF06114 IrrE N-terminal-like domain ACX60_09060 PF13673 Acetyltransferase (GNAT) domain ACX60_09085 PF00106 short chain dehydrogenase ACX60_09095 PF12146 Serine aminopeptidase, S33 ACX60_09100 PF02311 AraC-like ligand binding domain ACX60_09100 PF12833 Helix-turn-helix domain ACX60_09115 PF00512 His Kinase A (phospho-acceptor) domain ACX60_09115 PF16527 Two-component sensor protein CpxA, periplasmic domain ACX60_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_09115 PF00672 HAMP domain ACX60_09120 PF00486 Transcriptional regulatory protein, C terminal ACX60_09120 PF00072 Response regulator receiver domain ACX60_09125 PF00529 HlyD membrane-fusion protein of T1SS ACX60_09125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_09130 PF00873 AcrB/AcrD/AcrF family ACX60_09135 PF17760 UvrA interaction domain ACX60_09135 PF00005 ABC transporter ACX60_09135 PF17755 UvrA DNA-binding domain ACX60_09155 PF12833 Helix-turn-helix domain ACX60_09155 PF14525 AraC-binding-like domain ACX60_09165 PF01613 Flavin reductase like domain ACX60_09180 PF01738 Dienelactone hydrolase family ACX60_09185 PF07690 Major Facilitator Superfamily ACX60_09190 PF06719 AraC-type transcriptional regulator N-terminus ACX60_09190 PF12833 Helix-turn-helix domain ACX60_09210 PF00440 Bacterial regulatory proteins, tetR family ACX60_09230 PF03466 LysR substrate binding domain ACX60_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_09235 PF01144 Coenzyme A transferase ACX60_09240 PF01144 Coenzyme A transferase ACX60_09245 PF02667 Short chain fatty acid transporter ACX60_09250 PF00108 Thiolase, N-terminal domain ACX60_09250 PF02803 Thiolase, C-terminal domain ACX60_09255 PF03466 LysR substrate binding domain ACX60_09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_09260 PF03466 LysR substrate binding domain ACX60_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_09275 PF00206 Lyase ACX60_09275 PF10415 Fumarase C C-terminus ACX60_09280 PF07715 TonB-dependent Receptor Plug Domain ACX60_09280 PF00593 TonB dependent receptor ACX60_09285 PF00083 Sugar (and other) transporter ACX60_09300 PF00005 ABC transporter ACX60_09305 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_09310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ACX60_09330 PF02417 Chromate transporter ACX60_09335 PF02525 Flavodoxin-like fold ACX60_09340 PF01638 HxlR-like helix-turn-helix ACX60_09345 PF06445 GyrI-like small molecule binding domain ACX60_09345 PF12833 Helix-turn-helix domain ACX60_09360 PF01925 Sulfite exporter TauE/SafE ACX60_09365 PF04273 Putative phosphatase (DUF442) ACX60_09365 PF00753 Metallo-beta-lactamase superfamily ACX60_09370 PF04273 Putative phosphatase (DUF442) ACX60_09370 PF00753 Metallo-beta-lactamase superfamily ACX60_09375 PF02954 Bacterial regulatory protein, Fis family ACX60_09375 PF00158 Sigma-54 interaction domain ACX60_09375 PF00072 Response regulator receiver domain ACX60_09380 PF01062 Bestrophin, RFP-TM, chloride channel ACX60_09385 PF00107 Zinc-binding dehydrogenase ACX60_09385 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_09390 PF00106 short chain dehydrogenase ACX60_09395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACX60_09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_09400 PF02817 e3 binding domain ACX60_09400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACX60_09400 PF00364 Biotin-requiring enzyme ACX60_09405 PF02779 Transketolase, pyrimidine binding domain ACX60_09405 PF02780 Transketolase, C-terminal domain ACX60_09410 PF00676 Dehydrogenase E1 component ACX60_09415 PF04055 Radical SAM superfamily ACX60_09430 PF08448 PAS fold ACX60_09430 PF00990 Diguanylate cyclase, GGDEF domain ACX60_09435 PF01264 Chorismate synthase ACX60_09440 PF05175 Methyltransferase small domain ACX60_09445 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_09455 PF01434 Peptidase family M41 ACX60_09455 PF17862 AAA+ lid domain ACX60_09455 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_09465 PF05166 YcgL domain ACX60_09485 PF01612 3'-5' exonuclease ACX60_09485 PF00570 HRDC domain ACX60_09490 PF13662 Toprim domain ACX60_09490 PF02132 RecR protein ACX60_09495 PF02575 YbaB/EbfC DNA-binding family ACX60_09505 PF01053 Cys/Met metabolism PLP-dependent enzyme ACX60_09510 PF00561 alpha/beta hydrolase fold ACX60_09515 PF08241 Methyltransferase domain ACX60_09545 PF01230 HIT domain ACX60_09580 PF00005 ABC transporter ACX60_09585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_09595 PF02684 Lipid-A-disaccharide synthetase ACX60_09600 PF07715 TonB-dependent Receptor Plug Domain ACX60_09600 PF00593 TonB dependent receptor ACX60_09620 PF01925 Sulfite exporter TauE/SafE ACX60_09625 PF00793 DAHP synthetase I family ACX60_09630 PF02654 Cobalamin-5-phosphate synthase ACX60_09640 PF00300 Histidine phosphatase superfamily (branch 1) ACX60_09645 PF02277 Phosphoribosyltransferase ACX60_09650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ACX60_09660 PF13419 Haloacid dehalogenase-like hydrolase ACX60_09685 PF07715 TonB-dependent Receptor Plug Domain ACX60_09685 PF00593 TonB dependent receptor ACX60_09690 PF03737 Aldolase/RraA ACX60_09700 PF06276 Ferric iron reductase FhuF-like transporter ACX60_09700 PF04183 IucA / IucC family ACX60_09705 PF06276 Ferric iron reductase FhuF-like transporter ACX60_09705 PF04183 IucA / IucC family ACX60_09710 PF07690 Major Facilitator Superfamily ACX60_09715 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACX60_09720 PF06276 Ferric iron reductase FhuF-like transporter ACX60_09720 PF04183 IucA / IucC family ACX60_09725 PF04073 Aminoacyl-tRNA editing domain ACX60_09735 PF03109 ABC1 family ACX60_09740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_09740 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_09740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_09745 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_09745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_09750 PF00487 Fatty acid desaturase ACX60_09755 PF12852 Cupin ACX60_09755 PF12833 Helix-turn-helix domain ACX60_09765 PF00216 Bacterial DNA-binding protein ACX60_09780 PF02082 Transcriptional regulator ACX60_09785 PF00266 Aminotransferase class-V ACX60_09790 PF01592 NifU-like N terminal domain ACX60_09795 PF01521 Iron-sulphur cluster biosynthesis ACX60_09800 PF00226 DnaJ domain ACX60_09800 PF07743 HSCB C-terminal oligomerisation domain ACX60_09805 PF00012 Hsp70 protein ACX60_09810 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_09815 PF00211 Adenylate and Guanylate cyclase catalytic domain ACX60_09825 PF00270 DEAD/DEAH box helicase ACX60_09825 PF17757 UvrB interaction domain ACX60_09825 PF03461 TRCF domain ACX60_09825 PF00271 Helicase conserved C-terminal domain ACX60_09825 PF02559 CarD-like/TRCF domain ACX60_09845 PF03737 Aldolase/RraA ACX60_09850 PF13460 NAD(P)H-binding ACX60_09855 PF01649 Ribosomal protein S20 ACX60_09865 PF00459 Inositol monophosphatase family ACX60_09880 PF00005 ABC transporter ACX60_09880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACX60_09885 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_09890 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_09895 PF01432 Peptidase family M3 ACX60_09910 PF07715 TonB-dependent Receptor Plug Domain ACX60_09910 PF00593 TonB dependent receptor ACX60_09920 PF01618 MotA/TolQ/ExbB proton channel family ACX60_09925 PF02472 Biopolymer transport protein ExbD/TolR ACX60_09930 PF02472 Biopolymer transport protein ExbD/TolR ACX60_09940 PF01274 Malate synthase ACX60_10050 PF04860 Phage portal protein ACX60_10130 PF03796 DnaB-like helicase C terminal domain ACX60_10130 PF00772 DnaB-like helicase N terminal domain ACX60_10200 PF02899 Phage integrase, N-terminal SAM-like domain ACX60_10200 PF00589 Phage integrase family ACX60_10205 PF03969 AFG1-like ATPase ACX60_10215 PF00743 Flavin-binding monooxygenase-like ACX60_10225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACX60_10235 PF00216 Bacterial DNA-binding protein ACX60_10240 PF00575 S1 RNA binding domain ACX60_10245 PF02224 Cytidylate kinase ACX60_10255 PF14437 MafB19-like deaminase ACX60_10265 PF03167 Uracil DNA glycosylase superfamily ACX60_10275 PF03934 Type II secretion system (T2SS), protein K ACX60_10280 PF07963 Prokaryotic N-terminal methylation motif ACX60_10280 PF11612 Type II secretion system (T2SS), protein J ACX60_10285 PF02501 Type II secretion system (T2SS), protein I ACX60_10285 PF07963 Prokaryotic N-terminal methylation motif ACX60_10300 PF01026 TatD related DNase ACX60_10310 PF09115 DNA polymerase III, delta subunit, C terminal ACX60_10315 PF02348 Cytidylyltransferase ACX60_10320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACX60_10325 PF00664 ABC transporter transmembrane region ACX60_10325 PF00005 ABC transporter ACX60_10335 PF01618 MotA/TolQ/ExbB proton channel family ACX60_10340 PF17762 HTH domain found in ParB protein ACX60_10340 PF02195 ParB-like nuclease domain ACX60_10345 PF13614 AAA domain ACX60_10350 PF02527 rRNA small subunit methyltransferase G ACX60_10355 PF00483 Nucleotidyl transferase ACX60_10360 PF01636 Phosphotransferase enzyme family ACX60_10365 PF03968 OstA-like protein ACX60_10365 PF04453 LPS transport system D ACX60_10370 PF09312 SurA N-terminal domain ACX60_10370 PF00639 PPIC-type PPIASE domain ACX60_10375 PF01116 Fructose-bisphosphate aldolase class-II ACX60_10385 PF00162 Phosphoglycerate kinase ACX60_10395 PF02545 Maf-like protein ACX60_10400 PF08007 Cupin superfamily protein ACX60_10415 PF00375 Sodium:dicarboxylate symporter family ACX60_10420 PF06912 Protein of unknown function (DUF1275) ACX60_10425 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ACX60_10430 PF00664 ABC transporter transmembrane region ACX60_10430 PF00005 ABC transporter ACX60_10440 PF12833 Helix-turn-helix domain ACX60_10440 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACX60_10445 PF01597 Glycine cleavage H-protein ACX60_10450 PF02146 Sir2 family ACX60_10455 PF00474 Sodium:solute symporter family ACX60_10460 PF01037 Lrp/AsnC ligand binding domain ACX60_10465 PF00171 Aldehyde dehydrogenase family ACX60_10465 PF01619 Proline dehydrogenase ACX60_10465 PF14850 DNA-binding domain of Proline dehydrogenase ACX60_10465 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ACX60_10470 PF04229 GrpB protein ACX60_10475 PF05958 tRNA (Uracil-5-)-methyltransferase ACX60_10485 PF09992 Phosphodiester glycosidase ACX60_10495 PF04264 YceI-like domain ACX60_10505 PF00456 Transketolase, thiamine diphosphate binding domain ACX60_10505 PF02780 Transketolase, C-terminal domain ACX60_10505 PF02779 Transketolase, pyrimidine binding domain ACX60_10510 PF02772 S-adenosylmethionine synthetase, central domain ACX60_10510 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACX60_10510 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACX60_10530 PF00905 Penicillin binding protein transpeptidase domain ACX60_10545 PF02075 Crossover junction endodeoxyribonuclease RuvC ACX60_10550 PF01256 Carbohydrate kinase ACX60_10550 PF03853 YjeF-related protein N-terminus ACX60_10555 PF08331 Domain of unknown function (DUF1730) ACX60_10560 PF06968 Biotin and Thiamin Synthesis associated domain ACX60_10560 PF04055 Radical SAM superfamily ACX60_10575 PF16970 Type-1 fimbrial protein, A ACX60_10580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ACX60_10580 PF02753 Pili assembly chaperone PapD, C-terminal domain ACX60_10585 PF00577 Outer membrane usher protein ACX60_10585 PF13953 PapC C-terminal domain ACX60_10585 PF13954 PapC N-terminal domain ACX60_10605 PF00892 EamA-like transporter family ACX60_10615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ACX60_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_10625 PF03466 LysR substrate binding domain ACX60_10645 PF00440 Bacterial regulatory proteins, tetR family ACX60_10655 PF01709 Transcriptional regulator ACX60_10660 PF01037 Lrp/AsnC ligand binding domain ACX60_10670 PF00005 ABC transporter ACX60_10675 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_10680 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_10695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACX60_10695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_10705 PF00296 Luciferase-like monooxygenase ACX60_10710 PF03180 NLPA lipoprotein ACX60_10715 PF03180 NLPA lipoprotein ACX60_10720 PF09383 NIL domain ACX60_10720 PF00005 ABC transporter ACX60_10725 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_10730 PF06071 Protein of unknown function (DUF933) ACX60_10730 PF01926 50S ribosome-binding GTPase ACX60_10755 PF03591 AzlC protein ACX60_10760 PF05437 Branched-chain amino acid transport protein (AzlD) ACX60_10770 PF02222 ATP-grasp domain ACX60_10775 PF01909 Nucleotidyltransferase domain ACX60_10775 PF01966 HD domain ACX60_10775 PF08335 GlnD PII-uridylyltransferase ACX60_10780 PF00155 Aminotransferase class I and II ACX60_10790 PF12852 Cupin ACX60_10790 PF12833 Helix-turn-helix domain ACX60_10795 PF00255 Glutathione peroxidase ACX60_10800 PF01641 SelR domain ACX60_10805 PF00155 Aminotransferase class I and II ACX60_10810 PF00375 Sodium:dicarboxylate symporter family ACX60_10815 PF17763 Glutaminase/Asparaginase C-terminal domain ACX60_10815 PF00710 Asparaginase, N-terminal ACX60_10820 PF01336 OB-fold nucleic acid binding domain ACX60_10820 PF02811 PHP domain ACX60_10820 PF14579 Helix-hairpin-helix motif ACX60_10820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACX60_10820 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACX60_10825 PF00588 SpoU rRNA Methylase family ACX60_10830 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_10845 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_10845 PF13192 Thioredoxin domain ACX60_10860 PF03466 LysR substrate binding domain ACX60_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_10865 PF01758 Sodium Bile acid symporter family ACX60_10870 PF01022 Bacterial regulatory protein, arsR family ACX60_10875 PF03960 ArsC family ACX60_10885 PF13382 Adenine deaminase C-terminal domain ACX60_10885 PF01979 Amidohydrolase family ACX60_10895 PF03466 LysR substrate binding domain ACX60_10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_10905 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ACX60_10910 PF01177 Asp/Glu/Hydantoin racemase ACX60_10915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACX60_10920 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_10925 PF00005 ABC transporter ACX60_10930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ACX60_10940 PF00083 Sugar (and other) transporter ACX60_10945 PF00296 Luciferase-like monooxygenase ACX60_10960 PF01654 Cytochrome bd terminal oxidase subunit I ACX60_10965 PF02322 Cytochrome bd terminal oxidase subunit II ACX60_10975 PF00392 Bacterial regulatory proteins, gntR family ACX60_10975 PF00155 Aminotransferase class I and II ACX60_10980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_10980 PF03466 LysR substrate binding domain ACX60_10995 PF00698 Acyl transferase domain ACX60_11000 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ACX60_11010 PF01039 Carboxyl transferase domain ACX60_11015 PF06857 Malonate decarboxylase delta subunit (MdcD) ACX60_11020 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ACX60_11025 PF16957 Malonate decarboxylase, alpha subunit, transporter ACX60_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11030 PF03466 LysR substrate binding domain ACX60_11040 PF07690 Major Facilitator Superfamily ACX60_11055 PF00392 Bacterial regulatory proteins, gntR family ACX60_11060 PF04172 LrgB-like family ACX60_11065 PF03788 LrgA family ACX60_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11070 PF03466 LysR substrate binding domain ACX60_11075 PF02798 Glutathione S-transferase, N-terminal domain ACX60_11075 PF14834 Glutathione S-transferase, C-terminal domain ACX60_11080 PF02798 Glutathione S-transferase, N-terminal domain ACX60_11085 PF03466 LysR substrate binding domain ACX60_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11095 PF00581 Rhodanese-like domain ACX60_11100 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_11110 PF00266 Aminotransferase class-V ACX60_11115 PF01810 LysE type translocator ACX60_11120 PF03466 LysR substrate binding domain ACX60_11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11125 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACX60_11130 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACX60_11135 PF00005 ABC transporter ACX60_11140 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_11145 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_11155 PF00072 Response regulator receiver domain ACX60_11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_11160 PF00512 His Kinase A (phospho-acceptor) domain ACX60_11160 PF00072 Response regulator receiver domain ACX60_11160 PF09308 LuxQ, periplasmic ACX60_11170 PF01037 Lrp/AsnC ligand binding domain ACX60_11170 PF13404 AsnC-type helix-turn-helix domain ACX60_11180 PF00717 Peptidase S24-like ACX60_11205 PF06628 Catalase-related immune-responsive ACX60_11205 PF18011 C-terminal domain found in long catalases ACX60_11205 PF00199 Catalase ACX60_11215 PF00994 Probable molybdopterin binding domain ACX60_11215 PF18146 Damage-inducible protein CinA KH domain ACX60_11215 PF02464 Competence-damaged protein ACX60_11250 PF03466 LysR substrate binding domain ACX60_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11270 PF13193 AMP-binding enzyme C-terminal domain ACX60_11270 PF00501 AMP-binding enzyme ACX60_11275 PF00440 Bacterial regulatory proteins, tetR family ACX60_11280 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_11280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_11280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_11285 PF01039 Carboxyl transferase domain ACX60_11290 PF00378 Enoyl-CoA hydratase/isomerase ACX60_11295 PF02785 Biotin carboxylase C-terminal domain ACX60_11295 PF00289 Biotin carboxylase, N-terminal domain ACX60_11295 PF00364 Biotin-requiring enzyme ACX60_11295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_11300 PF00682 HMGL-like ACX60_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11305 PF03466 LysR substrate binding domain ACX60_11320 PF01810 LysE type translocator ACX60_11325 PF13419 Haloacid dehalogenase-like hydrolase ACX60_11330 PF00266 Aminotransferase class-V ACX60_11335 PF01266 FAD dependent oxidoreductase ACX60_11340 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_11345 PF08402 TOBE domain ACX60_11345 PF00005 ABC transporter ACX60_11355 PF00392 Bacterial regulatory proteins, gntR family ACX60_11355 PF07702 UTRA domain ACX60_11360 PF00842 Alanine racemase, C-terminal domain ACX60_11360 PF01168 Alanine racemase, N-terminal domain ACX60_11365 PF01494 FAD binding domain ACX60_11370 PF09339 IclR helix-turn-helix domain ACX60_11370 PF01614 Bacterial transcriptional regulator ACX60_11375 PF02525 Flavodoxin-like fold ACX60_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11380 PF03466 LysR substrate binding domain ACX60_11385 PF01292 Prokaryotic cytochrome b561 ACX60_11390 PF00199 Catalase ACX60_11420 PF03061 Thioesterase superfamily ACX60_11425 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_11430 PF07848 PaaX-like protein ACX60_11430 PF08223 PaaX-like protein C-terminal domain ACX60_11435 PF00501 AMP-binding enzyme ACX60_11435 PF14535 AMP-binding enzyme C-terminal domain ACX60_11440 PF00108 Thiolase, N-terminal domain ACX60_11440 PF02803 Thiolase, C-terminal domain ACX60_11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACX60_11445 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ACX60_11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACX60_11450 PF00378 Enoyl-CoA hydratase/isomerase ACX60_11455 PF00378 Enoyl-CoA hydratase/isomerase ACX60_11460 PF00175 Oxidoreductase NAD-binding domain ACX60_11460 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_11460 PF00970 Oxidoreductase FAD-binding domain ACX60_11465 PF01883 Iron-sulfur cluster assembly protein ACX60_11470 PF05138 Phenylacetic acid catabolic protein ACX60_11475 PF06243 Phenylacetic acid degradation B ACX60_11480 PF05138 Phenylacetic acid catabolic protein ACX60_11485 PF00171 Aldehyde dehydrogenase family ACX60_11485 PF01575 MaoC like domain ACX60_11490 PF03315 Serine dehydratase beta chain ACX60_11490 PF03313 Serine dehydratase alpha chain ACX60_11495 PF13520 Amino acid permease ACX60_11500 PF00171 Aldehyde dehydrogenase family ACX60_11505 PF00083 Sugar (and other) transporter ACX60_11515 PF04324 BFD-like [2Fe-2S] binding domain ACX60_11515 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_11525 PF01266 FAD dependent oxidoreductase ACX60_11530 PF05544 Proline racemase ACX60_11535 PF00392 Bacterial regulatory proteins, gntR family ACX60_11545 PF00701 Dihydrodipicolinate synthetase family ACX60_11555 PF09278 MerR, DNA binding ACX60_11555 PF00376 MerR family regulatory protein ACX60_11565 PF02677 Epoxyqueuosine reductase QueH ACX60_11580 PF07690 Major Facilitator Superfamily ACX60_11585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACX60_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11595 PF03466 LysR substrate binding domain ACX60_11625 PF07724 AAA domain (Cdc48 subfamily) ACX60_11625 PF17871 AAA lid domain ACX60_11625 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_11625 PF10431 C-terminal, D2-small domain, of ClpB protein ACX60_11635 PF01389 OmpA-like transmembrane domain ACX60_11635 PF00691 OmpA family ACX60_11690 PF03781 Sulfatase-modifying factor enzyme 1 ACX60_11715 PF00005 ABC transporter ACX60_11720 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACX60_11725 PF01425 Amidase ACX60_11730 PF08753 NikR C terminal nickel binding domain ACX60_11730 PF01402 Ribbon-helix-helix protein, copG family ACX60_11745 PF01638 HxlR-like helix-turn-helix ACX60_11750 PF02525 Flavodoxin-like fold ACX60_11755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_11755 PF00289 Biotin carboxylase, N-terminal domain ACX60_11755 PF02785 Biotin carboxylase C-terminal domain ACX60_11770 PF00107 Zinc-binding dehydrogenase ACX60_11770 PF13823 Alcohol dehydrogenase GroES-associated ACX60_11770 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_11780 PF00440 Bacterial regulatory proteins, tetR family ACX60_11785 PF00226 DnaJ domain ACX60_11785 PF00684 DnaJ central domain ACX60_11785 PF01556 DnaJ C terminal domain ACX60_11790 PF00654 Voltage gated chloride channel ACX60_11795 PF00289 Biotin carboxylase, N-terminal domain ACX60_11795 PF02785 Biotin carboxylase C-terminal domain ACX60_11795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACX60_11795 PF00364 Biotin-requiring enzyme ACX60_11805 PF07286 Protein of unknown function (DUF1445) ACX60_11810 PF03746 LamB/YcsF family ACX60_11815 PF01566 Natural resistance-associated macrophage protein ACX60_11820 PF03466 LysR substrate binding domain ACX60_11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_11835 PF13419 Haloacid dehalogenase-like hydrolase ACX60_11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACX60_11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACX60_11870 PF07690 Major Facilitator Superfamily ACX60_11885 PF01544 CorA-like Mg2+ transporter protein ACX60_11890 PF03279 Bacterial lipid A biosynthesis acyltransferase ACX60_11895 PF00563 EAL domain ACX60_11895 PF00990 Diguanylate cyclase, GGDEF domain ACX60_11895 PF03707 Bacterial signalling protein N terminal repeat ACX60_11900 PF00892 EamA-like transporter family ACX60_11905 PF01037 Lrp/AsnC ligand binding domain ACX60_11910 PF00488 MutS domain V ACX60_11910 PF05190 MutS family domain IV ACX60_11910 PF05192 MutS domain III ACX60_11910 PF01624 MutS domain I ACX60_11910 PF05188 MutS domain II ACX60_11920 PF11953 Domain of unknown function (DUF3470) ACX60_11920 PF00037 4Fe-4S binding domain ACX60_11930 PF01596 O-methyltransferase ACX60_11940 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_11945 PF01205 Uncharacterized protein family UPF0029 ACX60_11955 PF03412 Peptidase C39 family ACX60_11955 PF00005 ABC transporter ACX60_11955 PF00664 ABC transporter transmembrane region ACX60_11960 PF02321 Outer membrane efflux protein ACX60_11965 PF00005 ABC transporter ACX60_11965 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACX60_11970 PF03968 OstA-like protein ACX60_11985 PF00571 CBS domain ACX60_11985 PF01380 SIS domain ACX60_11990 PF01406 tRNA synthetases class I (C) catalytic domain ACX60_11990 PF09190 DALR domain ACX60_12020 PF01638 HxlR-like helix-turn-helix ACX60_12025 PF07690 Major Facilitator Superfamily ACX60_12045 PF03807 NADP oxidoreductase coenzyme F420-dependent ACX60_12045 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACX60_12055 PF00313 'Cold-shock' DNA-binding domain ACX60_12060 PF01810 LysE type translocator ACX60_12095 PF02601 Exonuclease VII, large subunit ACX60_12095 PF13742 OB-fold nucleic acid binding domain ACX60_12135 PF00376 MerR family regulatory protein ACX60_12135 PF09278 MerR, DNA binding ACX60_12140 PF00403 Heavy-metal-associated domain ACX60_12145 PF00403 Heavy-metal-associated domain ACX60_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_12150 PF03466 LysR substrate binding domain ACX60_12155 PF00355 Rieske [2Fe-2S] domain ACX60_12155 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACX60_12160 PF00866 Ring hydroxylating beta subunit ACX60_12165 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_12165 PF00970 Oxidoreductase FAD-binding domain ACX60_12165 PF00175 Oxidoreductase NAD-binding domain ACX60_12170 PF00106 short chain dehydrogenase ACX60_12175 PF03594 Benzoate membrane transport protein ACX60_12180 PF07690 Major Facilitator Superfamily ACX60_12190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACX60_12190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACX60_12195 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACX60_12195 PF04408 Helicase associated domain (HA2) ACX60_12195 PF11898 Domain of unknown function (DUF3418) ACX60_12195 PF00270 DEAD/DEAH box helicase ACX60_12195 PF00271 Helicase conserved C-terminal domain ACX60_12200 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACX60_12200 PF00578 AhpC/TSA family ACX60_12220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_12220 PF13192 Thioredoxin domain ACX60_12230 PF00043 Glutathione S-transferase, C-terminal domain ACX60_12230 PF02798 Glutathione S-transferase, N-terminal domain ACX60_12240 PF02390 Putative methyltransferase ACX60_12245 PF00043 Glutathione S-transferase, C-terminal domain ACX60_12245 PF13417 Glutathione S-transferase, N-terminal domain ACX60_12255 PF13488 Glycine zipper ACX60_12255 PF00691 OmpA family ACX60_12260 PF01979 Amidohydrolase family ACX60_12265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACX60_12265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACX60_12275 PF01170 Putative RNA methylase family UPF0020 ACX60_12275 PF02926 THUMP domain ACX60_12275 PF10672 S-adenosylmethionine-dependent methyltransferase ACX60_12290 PF10431 C-terminal, D2-small domain, of ClpB protein ACX60_12290 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_12290 PF07724 AAA domain (Cdc48 subfamily) ACX60_12290 PF17871 AAA lid domain ACX60_12290 PF02861 Clp amino terminal domain, pathogenicity island component ACX60_12305 PF02566 OsmC-like protein ACX60_12310 PF00027 Cyclic nucleotide-binding domain ACX60_12310 PF13545 Crp-like helix-turn-helix domain ACX60_12315 PF00248 Aldo/keto reductase family ACX60_12330 PF00709 Adenylosuccinate synthetase ACX60_12335 PF13393 Histidyl-tRNA synthetase ACX60_12340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACX60_12340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACX60_12345 PF02272 DHHA1 domain ACX60_12345 PF01411 tRNA synthetases class II (A) ACX60_12345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACX60_12350 PF00589 Phage integrase family ACX60_12350 PF13356 Arm DNA-binding domain ACX60_12365 PF00717 Peptidase S24-like ACX60_12370 PF11799 impB/mucB/samB family C-terminal domain ACX60_12370 PF00817 impB/mucB/samB family ACX60_12370 PF13438 Domain of unknown function (DUF4113) ACX60_12485 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) ACX60_12510 PF06381 Protein of unknown function (DUF1073) ACX60_12580 PF00145 C-5 cytosine-specific DNA methylase ACX60_12595 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ACX60_12600 PF00717 Peptidase S24-like ACX60_12600 PF01726 LexA DNA binding domain ACX60_12650 PF13840 ACT domain ACX60_12650 PF01842 ACT domain ACX60_12650 PF00696 Amino acid kinase family ACX60_12655 PF02599 Global regulator protein family ACX60_12660 PF01351 Ribonuclease HII ACX60_12670 PF01292 Prokaryotic cytochrome b561 ACX60_12675 PF00962 Adenosine/AMP deaminase ACX60_12680 PF00860 Permease family ACX60_12690 PF00743 Flavin-binding monooxygenase-like ACX60_12695 PF00106 short chain dehydrogenase ACX60_12705 PF17954 Quercetinase C-terminal cupin domain ACX60_12705 PF02678 Pirin ACX60_12710 PF00440 Bacterial regulatory proteins, tetR family ACX60_12710 PF17932 Tetracyclin repressor-like, C-terminal domain ACX60_12720 PF00106 short chain dehydrogenase ACX60_12725 PF00743 Flavin-binding monooxygenase-like ACX60_12730 PF04072 Leucine carboxyl methyltransferase ACX60_12735 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACX60_12735 PF12833 Helix-turn-helix domain ACX60_12740 PF00743 Flavin-binding monooxygenase-like ACX60_12745 PF00106 short chain dehydrogenase ACX60_12750 PF07859 alpha/beta hydrolase fold ACX60_12755 PF05199 GMC oxidoreductase ACX60_12760 PF03573 outer membrane porin, OprD family ACX60_12765 PF07690 Major Facilitator Superfamily ACX60_12770 PF00355 Rieske [2Fe-2S] domain ACX60_12775 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_12775 PF00175 Oxidoreductase NAD-binding domain ACX60_12790 PF07690 Major Facilitator Superfamily ACX60_12795 PF00378 Enoyl-CoA hydratase/isomerase ACX60_12800 PF00171 Aldehyde dehydrogenase family ACX60_12810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_12810 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_12810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_12815 PF03573 outer membrane porin, OprD family ACX60_12830 PF07519 Tannase and feruloyl esterase ACX60_12835 PF07729 FCD domain ACX60_12835 PF00392 Bacterial regulatory proteins, gntR family ACX60_12840 PF00171 Aldehyde dehydrogenase family ACX60_12845 PF00701 Dihydrodipicolinate synthetase family ACX60_12850 PF13378 Enolase C-terminal domain-like ACX60_12855 PF07690 Major Facilitator Superfamily ACX60_12860 PF08666 SAF domain ACX60_12860 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ACX60_12865 PF00892 EamA-like transporter family ACX60_12870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACX60_12870 PF12833 Helix-turn-helix domain ACX60_12875 PF00171 Aldehyde dehydrogenase family ACX60_12895 PF00324 Amino acid permease ACX60_12900 PF04958 Arginine N-succinyltransferase beta subunit ACX60_12905 PF00202 Aminotransferase class-III ACX60_12915 PF00171 Aldehyde dehydrogenase family ACX60_12925 PF00392 Bacterial regulatory proteins, gntR family ACX60_12925 PF07729 FCD domain ACX60_12935 PF00324 Amino acid permease ACX60_12940 PF01266 FAD dependent oxidoreductase ACX60_12945 PF00324 Amino acid permease ACX60_12970 PF03180 NLPA lipoprotein ACX60_12975 PF01494 FAD binding domain ACX60_12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_12990 PF03466 LysR substrate binding domain ACX60_12995 PF01266 FAD dependent oxidoreductase ACX60_13000 PF01042 Endoribonuclease L-PSP ACX60_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_13040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_13050 PF00764 Arginosuccinate synthase ACX60_13055 PF00360 Phytochrome region ACX60_13055 PF01590 GAF domain ACX60_13055 PF00563 EAL domain ACX60_13055 PF00990 Diguanylate cyclase, GGDEF domain ACX60_13060 PF01979 Amidohydrolase family ACX60_13065 PF00929 Exonuclease ACX60_13075 PF00593 TonB dependent receptor ACX60_13075 PF07715 TonB-dependent Receptor Plug Domain ACX60_13080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACX60_13080 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_13085 PF00005 ABC transporter ACX60_13085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACX60_13090 PF12911 N-terminal TM domain of oligopeptide transport permease C ACX60_13090 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_13095 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_13100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACX60_13105 PF01476 LysM domain ACX60_13105 PF01476 LysM domain ACX60_13105 PF01464 Transglycosylase SLT domain ACX60_13105 PF01464 Transglycosylase SLT domain ACX60_13110 PF00929 Exonuclease ACX60_13120 PF09297 NADH pyrophosphatase zinc ribbon domain ACX60_13120 PF00293 NUDIX domain ACX60_13130 PF04972 BON domain ACX60_13135 PF02021 Uncharacterised protein family UPF0102 ACX60_13140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACX60_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_13150 PF03466 LysR substrate binding domain ACX60_13155 PF01810 LysE type translocator ACX60_13165 PF13411 MerR HTH family regulatory protein ACX60_13175 PF01494 FAD binding domain ACX60_13180 PF01494 FAD binding domain ACX60_13185 PF00557 Metallopeptidase family M24 ACX60_13185 PF05195 Aminopeptidase P, N-terminal domain ACX60_13215 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACX60_13220 PF01389 OmpA-like transmembrane domain ACX60_13220 PF00691 OmpA family ACX60_13225 PF05662 Coiled stalk of trimeric autotransporter adhesin ACX60_13225 PF13018 Extended Signal Peptide of Type V secretion system ACX60_13225 PF03895 YadA-like membrane anchor domain ACX60_13225 PF05658 Head domain of trimeric autotransporter adhesin ACX60_13230 PF00004 ATPase family associated with various cellular activities (AAA) ACX60_13230 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACX60_13230 PF05362 Lon protease (S16) C-terminal proteolytic domain ACX60_13235 PF02590 Predicted SPOUT methyltransferase ACX60_13240 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACX60_13250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACX60_13250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACX60_13255 PF04060 Putative Fe-S cluster ACX60_13260 PF00730 HhH-GPD superfamily base excision DNA repair protein ACX60_13260 PF10576 Iron-sulfur binding domain of endonuclease III ACX60_13260 PF00633 Helix-hairpin-helix motif ACX60_13265 PF05191 Adenylate kinase, active site lid ACX60_13280 PF03717 Penicillin-binding Protein dimerisation domain ACX60_13280 PF00905 Penicillin binding protein transpeptidase domain ACX60_13295 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACX60_13300 PF01730 UreF ACX60_13305 PF05194 UreE urease accessory protein, C-terminal domain ACX60_13305 PF02814 UreE urease accessory protein, N-terminal domain ACX60_13310 PF01979 Amidohydrolase family ACX60_13310 PF00449 Urease alpha-subunit, N-terminal domain ACX60_13320 PF00699 Urease beta subunit ACX60_13325 PF00547 Urease, gamma subunit ACX60_13330 PF01774 UreD urease accessory protein ACX60_13345 PF00463 Isocitrate lyase family ACX60_13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_13350 PF03466 LysR substrate binding domain ACX60_13355 PF01595 Cyclin M transmembrane N-terminal domain ACX60_13355 PF00571 CBS domain ACX60_13355 PF03471 Transporter associated domain ACX60_13360 PF03600 Citrate transporter ACX60_13375 PF00009 Elongation factor Tu GTP binding domain ACX60_13380 PF01507 Phosphoadenosine phosphosulfate reductase family ACX60_13385 PF14052 Capsule assembly protein Wzi ACX60_13390 PF01336 OB-fold nucleic acid binding domain ACX60_13390 PF00152 tRNA synthetases class II (D, K and N) ACX60_13405 PF00301 Rubredoxin ACX60_13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_13410 PF18113 Rubredoxin binding C-terminal domain ACX60_13415 PF00561 alpha/beta hydrolase fold ACX60_13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_13420 PF03466 LysR substrate binding domain ACX60_13430 PF13089 Polyphosphate kinase N-terminal domain ACX60_13430 PF17941 Polyphosphate kinase C-terminal domain 1 ACX60_13430 PF13090 Polyphosphate kinase C-terminal domain 2 ACX60_13430 PF02503 Polyphosphate kinase middle domain ACX60_13435 PF00912 Transglycosylase ACX60_13440 PF01694 Rhomboid family ACX60_13450 PF00005 ABC transporter ACX60_13455 PF13472 GDSL-like Lipase/Acylhydrolase family ACX60_13460 PF00484 Carbonic anhydrase ACX60_13465 PF00561 alpha/beta hydrolase fold ACX60_13475 PF07715 TonB-dependent Receptor Plug Domain ACX60_13475 PF00593 TonB dependent receptor ACX60_13480 PF01106 NifU-like domain ACX60_13480 PF01521 Iron-sulphur cluster biosynthesis ACX60_13490 PF00884 Sulfatase ACX60_13495 PF03781 Sulfatase-modifying factor enzyme 1 ACX60_13510 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_13515 PF01384 Phosphate transporter family ACX60_13520 PF02574 Homocysteine S-methyltransferase ACX60_13520 PF00809 Pterin binding enzyme ACX60_13520 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACX60_13520 PF02607 B12 binding domain ACX60_13520 PF02310 B12 binding domain ACX60_13525 PF02780 Transketolase, C-terminal domain ACX60_13525 PF02779 Transketolase, pyrimidine binding domain ACX60_13530 PF00456 Transketolase, thiamine diphosphate binding domain ACX60_13535 PF07690 Major Facilitator Superfamily ACX60_13545 PF03466 LysR substrate binding domain ACX60_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_13555 PF01263 Aldose 1-epimerase ACX60_13565 PF07690 Major Facilitator Superfamily ACX60_13570 PF12833 Helix-turn-helix domain ACX60_13570 PF02311 AraC-like ligand binding domain ACX60_13575 PF04960 Glutaminase ACX60_13580 PF01327 Polypeptide deformylase ACX60_13585 PF07690 Major Facilitator Superfamily ACX60_13595 PF00205 Thiamine pyrophosphate enzyme, central domain ACX60_13595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACX60_13595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACX60_13600 PF00171 Aldehyde dehydrogenase family ACX60_13605 PF03447 Homoserine dehydrogenase, NAD binding domain ACX60_13605 PF01958 Domain of unknown function DUF108 ACX60_13615 PF12697 Alpha/beta hydrolase family ACX60_13625 PF07690 Major Facilitator Superfamily ACX60_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_13630 PF14759 Reductase C-terminal ACX60_13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACX60_13645 PF00355 Rieske [2Fe-2S] domain ACX60_13655 PF00355 Rieske [2Fe-2S] domain ACX60_13660 PF01614 Bacterial transcriptional regulator ACX60_13660 PF09339 IclR helix-turn-helix domain ACX60_13675 PF00378 Enoyl-CoA hydratase/isomerase ACX60_13685 PF00535 Glycosyl transferase family 2 ACX60_13690 PF01522 Polysaccharide deacetylase ACX60_13690 PF14883 Hypothetical glycosyl hydrolase family 13 ACX60_13695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_13700 PF07152 YaeQ protein ACX60_13705 PF00375 Sodium:dicarboxylate symporter family ACX60_13710 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACX60_13710 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACX60_13720 PF03061 Thioesterase superfamily ACX60_13730 PF02028 BCCT, betaine/carnitine/choline family transporter ACX60_13735 PF02028 BCCT, betaine/carnitine/choline family transporter ACX60_13740 PF00440 Bacterial regulatory proteins, tetR family ACX60_13740 PF13977 BetI-type transcriptional repressor, C-terminal ACX60_13745 PF00171 Aldehyde dehydrogenase family ACX60_13750 PF00732 GMC oxidoreductase ACX60_13750 PF05199 GMC oxidoreductase ACX60_13755 PF06039 Malate:quinone oxidoreductase (Mqo) ACX60_13765 PF02574 Homocysteine S-methyltransferase ACX60_13770 PF13520 Amino acid permease ACX60_13795 PF00701 Dihydrodipicolinate synthetase family ACX60_13800 PF00083 Sugar (and other) transporter ACX60_13840 PF07690 Major Facilitator Superfamily ACX60_13845 PF13533 Biotin-lipoyl like ACX60_13850 PF03061 Thioesterase superfamily ACX60_13855 PF00490 Delta-aminolevulinic acid dehydratase ACX60_13860 PF01266 FAD dependent oxidoreductase ACX60_13865 PF01370 NAD dependent epimerase/dehydratase family ACX60_13865 PF08338 Domain of unknown function (DUF1731) ACX60_13885 PF12320 Type 5 capsule protein repressor C-terminal domain ACX60_13885 PF00149 Calcineurin-like phosphoesterase ACX60_13895 PF01168 Alanine racemase, N-terminal domain ACX60_13900 PF00437 Type II/IV secretion system protein ACX60_13905 PF00437 Type II/IV secretion system protein ACX60_13910 PF01475 Ferric uptake regulator family ACX60_13915 PF04355 SmpA / OmlA family ACX60_13920 PF03658 RnfH family Ubiquitin ACX60_13930 PF01814 Hemerythrin HHE cation binding domain ACX60_13935 PF13230 Glutamine amidotransferases class-II ACX60_13945 PF00696 Amino acid kinase family ACX60_13950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACX60_13950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACX60_13950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACX60_13950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACX60_13955 PF00692 dUTPase ACX60_13960 PF13361 UvrD-like helicase C-terminal domain ACX60_13960 PF00580 UvrD/REP helicase N-terminal domain ACX60_13965 PF13488 Glycine zipper ACX60_13965 PF00691 OmpA family ACX60_13970 PF01553 Acyltransferase ACX60_13980 PF03775 Septum formation inhibitor MinC, C-terminal domain ACX60_13985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACX60_13990 PF03776 Septum formation topological specificity factor MinE ACX60_14000 PF01810 LysE type translocator ACX60_14005 PF17854 FtsK alpha domain ACX60_14005 PF01580 FtsK/SpoIIIE family ACX60_14005 PF09397 Ftsk gamma domain ACX60_14005 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACX60_14010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACX60_14015 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACX60_14020 PF04376 Arginine-tRNA-protein transferase, N terminus ACX60_14020 PF04377 Arginine-tRNA-protein transferase, C terminus ACX60_14025 PF00583 Acetyltransferase (GNAT) family ACX60_14040 PF03143 Elongation factor Tu C-terminal domain ACX60_14040 PF03144 Elongation factor Tu domain 2 ACX60_14040 PF00009 Elongation factor Tu GTP binding domain ACX60_14045 PF00009 Elongation factor Tu GTP binding domain ACX60_14045 PF03764 Elongation factor G, domain IV ACX60_14045 PF00679 Elongation factor G C-terminus ACX60_14045 PF03144 Elongation factor Tu domain 2 ACX60_14045 PF14492 Elongation Factor G, domain II ACX60_14050 PF00177 Ribosomal protein S7p/S5e ACX60_14055 PF00164 Ribosomal protein S12/S23 ACX60_14065 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_14065 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_14075 PF05726 Pirin C-terminal cupin domain ACX60_14075 PF02678 Pirin ACX60_14085 PF02540 NAD synthase ACX60_14085 PF00795 Carbon-nitrogen hydrolase ACX60_14100 PF00111 2Fe-2S iron-sulfur cluster binding domain ACX60_14100 PF00175 Oxidoreductase NAD-binding domain ACX60_14100 PF00970 Oxidoreductase FAD-binding domain ACX60_14105 PF00171 Aldehyde dehydrogenase family ACX60_14110 PF00355 Rieske [2Fe-2S] domain ACX60_14110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACX60_14115 PF07859 alpha/beta hydrolase fold ACX60_14120 PF02028 BCCT, betaine/carnitine/choline family transporter ACX60_14125 PF00180 Isocitrate/isopropylmalate dehydrogenase ACX60_14130 PF03466 LysR substrate binding domain ACX60_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14145 PF00037 4Fe-4S binding domain ACX60_14150 PF01467 Cytidylyltransferase-like ACX60_14155 PF01668 SmpB protein ACX60_14160 PF03358 NADPH-dependent FMN reductase ACX60_14170 PF01479 S4 domain ACX60_14170 PF00849 RNA pseudouridylate synthase ACX60_14175 PF13525 Outer membrane lipoprotein ACX60_14180 PF01807 CHC2 zinc finger ACX60_14180 PF08275 DNA primase catalytic core, N-terminal domain ACX60_14180 PF08278 DNA primase DnaG DnaB-binding ACX60_14180 PF10410 DnaB-helicase binding domain of primase ACX60_14185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACX60_14185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACX60_14185 PF01488 Shikimate / quinate 5-dehydrogenase ACX60_14195 PF03550 Outer membrane lipoprotein LolB ACX60_14200 PF00288 GHMP kinases N terminal domain ACX60_14200 PF08544 GHMP kinases C terminal ACX60_14225 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACX60_14225 PF14572 Phosphoribosyl synthetase-associated domain ACX60_14230 PF01386 Ribosomal L25p family ACX60_14235 PF01195 Peptidyl-tRNA hydrolase ACX60_14240 PF02261 Aspartate decarboxylase ACX60_14255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACX60_14265 PF02581 Thiamine monophosphate synthase ACX60_14265 PF08543 Phosphomethylpyrimidine kinase ACX60_14265 PF03070 TENA/THI-4/PQQC family ACX60_14270 PF01476 LysM domain ACX60_14270 PF04972 BON domain ACX60_14275 PF00550 Phosphopantetheine attachment site ACX60_14285 PF00698 Acyl transferase domain ACX60_14290 PF01783 Ribosomal L32p protein family ACX60_14295 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACX60_14300 PF04315 Elongation factor P hydroxylase ACX60_14305 PF01300 Telomere recombination ACX60_14310 PF02616 Segregation and condensation protein ScpA ACX60_14315 PF04079 Segregation and condensation complex subunit ScpB ACX60_14320 PF01479 S4 domain ACX60_14320 PF00849 RNA pseudouridylate synthase ACX60_14335 PF00155 Aminotransferase class I and II ACX60_14340 PF00202 Aminotransferase class-III ACX60_14340 PF06968 Biotin and Thiamin Synthesis associated domain ACX60_14340 PF04055 Radical SAM superfamily ACX60_14345 PF12697 Alpha/beta hydrolase family ACX60_14345 PF08241 Methyltransferase domain ACX60_14350 PF02358 Trehalose-phosphatase ACX60_14355 PF00982 Glycosyltransferase family 20 ACX60_14360 PF07690 Major Facilitator Superfamily ACX60_14365 PF00210 Ferritin-like domain ACX60_14370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACX60_14370 PF03120 NAD-dependent DNA ligase OB-fold domain ACX60_14370 PF01653 NAD-dependent DNA ligase adenylation domain ACX60_14370 PF00533 BRCA1 C Terminus (BRCT) domain ACX60_14370 PF12826 Helix-hairpin-helix motif ACX60_14380 PF02463 RecF/RecN/SMC N terminal domain ACX60_14380 PF06470 SMC proteins Flexible Hinge Domain ACX60_14390 PF01925 Sulfite exporter TauE/SafE ACX60_14400 PF03309 Type III pantothenate kinase ACX60_14405 PF02978 Signal peptide binding domain ACX60_14405 PF02881 SRP54-type protein, helical bundle domain ACX60_14405 PF00448 SRP54-type protein, GTPase domain ACX60_14415 PF01207 Dihydrouridine synthase (Dus) ACX60_14445 PF00692 dUTPase ACX60_14460 PF01048 Phosphorylase superfamily ACX60_14465 PF10609 NUBPL iron-transfer P-loop NTPase ACX60_14475 PF01588 Putative tRNA binding domain ACX60_14475 PF09334 tRNA synthetases class I (M) ACX60_14500 PF13533 Biotin-lipoyl like ACX60_14505 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_14520 PF05552 Conserved TM helix ACX60_14535 PF00970 Oxidoreductase FAD-binding domain ACX60_14535 PF00175 Oxidoreductase NAD-binding domain ACX60_14540 PF03466 LysR substrate binding domain ACX60_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14550 PF00313 'Cold-shock' DNA-binding domain ACX60_14560 PF00361 Proton-conducting membrane transporter ACX60_14565 PF00361 Proton-conducting membrane transporter ACX60_14570 PF00361 Proton-conducting membrane transporter ACX60_14570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACX60_14575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACX60_14580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACX60_14585 PF12838 4Fe-4S dicluster domain ACX60_14590 PF00146 NADH dehydrogenase ACX60_14595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACX60_14595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACX60_14595 PF00384 Molybdopterin oxidoreductase ACX60_14600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACX60_14600 PF10531 SLBB domain ACX60_14600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACX60_14610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACX60_14610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACX60_14615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACX60_14620 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACX60_14625 PF00990 Diguanylate cyclase, GGDEF domain ACX60_14625 PF17151 Periplasmic sensor domain ACX60_14635 PF00512 His Kinase A (phospho-acceptor) domain ACX60_14635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_14635 PF00672 HAMP domain ACX60_14640 PF00072 Response regulator receiver domain ACX60_14640 PF00486 Transcriptional regulatory protein, C terminal ACX60_14645 PF00317 Ribonucleotide reductase, all-alpha domain ACX60_14645 PF03477 ATP cone domain ACX60_14645 PF02867 Ribonucleotide reductase, barrel domain ACX60_14655 PF00268 Ribonucleotide reductase, small chain ACX60_14670 PF17074 Darcynin, domain of unknown function ACX60_14685 PF17074 Darcynin, domain of unknown function ACX60_14700 PF01613 Flavin reductase like domain ACX60_14705 PF08267 Cobalamin-independent synthase, N-terminal domain ACX60_14705 PF01717 Cobalamin-independent synthase, Catalytic domain ACX60_14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14715 PF03466 LysR substrate binding domain ACX60_14720 PF01810 LysE type translocator ACX60_14730 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACX60_14730 PF12833 Helix-turn-helix domain ACX60_14735 PF01546 Peptidase family M20/M25/M40 ACX60_14735 PF07687 Peptidase dimerisation domain ACX60_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14745 PF03466 LysR substrate binding domain ACX60_14750 PF07690 Major Facilitator Superfamily ACX60_14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14760 PF03466 LysR substrate binding domain ACX60_14765 PF14537 Cytochrome c3 ACX60_14765 PF00890 FAD binding domain ACX60_14775 PF02515 CoA-transferase family III ACX60_14780 PF07690 Major Facilitator Superfamily ACX60_14785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_14785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_14785 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_14790 PF03466 LysR substrate binding domain ACX60_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_14795 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_14795 PF00107 Zinc-binding dehydrogenase ACX60_14800 PF00962 Adenosine/AMP deaminase ACX60_14825 PF02445 Quinolinate synthetase A protein ACX60_14830 PF01960 ArgJ family ACX60_14835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACX60_14835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACX60_14840 PF00893 Small Multidrug Resistance protein ACX60_14855 PF07732 Multicopper oxidase ACX60_14855 PF07731 Multicopper oxidase ACX60_14855 PF00394 Multicopper oxidase ACX60_14870 PF00834 Ribulose-phosphate 3 epimerase family ACX60_14880 PF00756 Putative esterase ACX60_14890 PF04445 Putative SAM-dependent methyltransferase ACX60_14895 PF00814 Glycoprotease family ACX60_14900 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_14905 PF00293 NUDIX domain ACX60_14945 PF00425 chorismate binding enzyme ACX60_14945 PF04715 Anthranilate synthase component I, N terminal region ACX60_14950 PF00155 Aminotransferase class I and II ACX60_14955 PF00815 Histidinol dehydrogenase ACX60_14960 PF01634 ATP phosphoribosyltransferase ACX60_14965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACX60_14970 PF01722 BolA-like protein ACX60_14975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACX60_14980 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACX60_14980 PF04552 Sigma-54, DNA binding domain ACX60_14980 PF04963 Sigma-54 factor, core binding domain ACX60_15025 PF00795 Carbon-nitrogen hydrolase ACX60_15035 PF01047 MarR family ACX60_15040 PF02566 OsmC-like protein ACX60_15045 PF00437 Type II/IV secretion system protein ACX60_15065 PF01367 5'-3' exonuclease, C-terminal SAM fold ACX60_15065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACX60_15065 PF00476 DNA polymerase family A ACX60_15065 PF01612 3'-5' exonuclease ACX60_15070 PF02325 YGGT family ACX60_15075 PF03807 NADP oxidoreductase coenzyme F420-dependent ACX60_15075 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACX60_15080 PF11734 TilS substrate C-terminal domain ACX60_15080 PF09179 TilS substrate binding domain ACX60_15080 PF01171 PP-loop family ACX60_15085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACX60_15090 PF02541 Ppx/GppA phosphatase family ACX60_15095 PF00085 Thioredoxin ACX60_15100 PF07498 Rho termination factor, N-terminal domain ACX60_15100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACX60_15100 PF07497 Rho termination factor, RNA-binding domain ACX60_15110 PF00216 Bacterial DNA-binding protein ACX60_15115 PF03483 B3/4 domain ACX60_15115 PF03484 tRNA synthetase B5 domain ACX60_15115 PF03147 Ferredoxin-fold anticodon binding domain ACX60_15115 PF01588 Putative tRNA binding domain ACX60_15115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACX60_15120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACX60_15120 PF01409 tRNA synthetases class II core domain (F) ACX60_15140 PF00453 Ribosomal protein L20 ACX60_15145 PF01632 Ribosomal protein L35 ACX60_15150 PF07690 Major Facilitator Superfamily ACX60_15155 PF09335 SNARE associated Golgi protein ACX60_15160 PF00043 Glutathione S-transferase, C-terminal domain ACX60_15160 PF02798 Glutathione S-transferase, N-terminal domain ACX60_15165 PF05198 Translation initiation factor IF-3, N-terminal domain ACX60_15165 PF00707 Translation initiation factor IF-3, C-terminal domain ACX60_15170 PF02824 TGS domain ACX60_15170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACX60_15170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACX60_15170 PF03129 Anticodon binding domain ACX60_15175 PF00501 AMP-binding enzyme ACX60_15175 PF13193 AMP-binding enzyme C-terminal domain ACX60_15180 PF04751 Protein of unknown function (DUF615) ACX60_15185 PF00381 PTS HPr component phosphorylation site ACX60_15190 PF03668 P-loop ATPase protein family ACX60_15195 PF02569 Pantoate-beta-alanine ligase ACX60_15200 PF02548 Ketopantoate hydroxymethyltransferase ACX60_15205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACX60_15210 PF12627 Probable RNA and SrmB- binding site of polymerase A ACX60_15210 PF12626 Polymerase A arginine-rich C-terminus ACX60_15210 PF01743 Poly A polymerase head domain ACX60_15220 PF03819 MazG nucleotide pyrophosphohydrolase domain ACX60_15230 PF13291 ACT domain ACX60_15230 PF02824 TGS domain ACX60_15230 PF04607 Region found in RelA / SpoT proteins ACX60_15235 PF05958 tRNA (Uracil-5-)-methyltransferase ACX60_15245 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_15250 PF00072 Response regulator receiver domain ACX60_15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_15250 PF00672 HAMP domain ACX60_15250 PF01627 Hpt domain ACX60_15250 PF00512 His Kinase A (phospho-acceptor) domain ACX60_15250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACX60_15255 PF00378 Enoyl-CoA hydratase/isomerase ACX60_15260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACX60_15260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACX60_15265 PF01261 Xylose isomerase-like TIM barrel ACX60_15275 PF00106 short chain dehydrogenase ACX60_15280 PF02233 NAD(P) transhydrogenase beta subunit ACX60_15285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACX60_15290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACX60_15290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACX60_15295 PF00892 EamA-like transporter family ACX60_15305 PF07690 Major Facilitator Superfamily ACX60_15310 PF01207 Dihydrouridine synthase (Dus) ACX60_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_15320 PF03466 LysR substrate binding domain ACX60_15325 PF00899 ThiF family ACX60_15330 PF00694 Aconitase C-terminal domain ACX60_15330 PF00330 Aconitase family (aconitate hydratase) ACX60_15335 PF01026 TatD related DNase ACX60_15350 PF00009 Elongation factor Tu GTP binding domain ACX60_15350 PF16658 Class II release factor RF3, C-terminal domain ACX60_15350 PF03144 Elongation factor Tu domain 2 ACX60_15370 PF04717 Type VI secretion system, phage-baseplate injector ACX60_15370 PF16671 Actin cross-linking domain ACX60_15390 PF00563 EAL domain ACX60_15390 PF03707 Bacterial signalling protein N terminal repeat ACX60_15390 PF00990 Diguanylate cyclase, GGDEF domain ACX60_15395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACX60_15395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACX60_15400 PF10369 Small subunit of acetolactate synthase ACX60_15405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACX60_15405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACX60_15405 PF00205 Thiamine pyrophosphate enzyme, central domain ACX60_15415 PF09334 tRNA synthetases class I (M) ACX60_15415 PF13603 Leucyl-tRNA synthetase, Domain 2 ACX60_15415 PF00133 tRNA synthetases class I (I, L, M and V) ACX60_15415 PF08264 Anticodon-binding domain of tRNA ACX60_15430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACX60_15435 PF12704 MacB-like periplasmic core domain ACX60_15435 PF00005 ABC transporter ACX60_15435 PF02687 FtsX-like permease family ACX60_15440 PF02321 Outer membrane efflux protein ACX60_15455 PF00929 Exonuclease ACX60_15460 PF03193 RsgA GTPase ACX60_15470 PF00462 Glutaredoxin ACX60_15475 PF02556 Preprotein translocase subunit SecB ACX60_15490 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_15490 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_15505 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_15505 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_15515 PF04820 Tryptophan halogenase ACX60_15535 PF00221 Aromatic amino acid lyase ACX60_15545 PF00535 Glycosyl transferase family 2 ACX60_15550 PF00501 AMP-binding enzyme ACX60_15550 PF13193 AMP-binding enzyme C-terminal domain ACX60_15560 PF00550 Phosphopantetheine attachment site ACX60_15565 PF00550 Phosphopantetheine attachment site ACX60_15580 PF01926 50S ribosome-binding GTPase ACX60_15580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACX60_15585 PF13360 PQQ-like domain ACX60_15595 PF13393 Histidyl-tRNA synthetase ACX60_15595 PF03129 Anticodon binding domain ACX60_15600 PF04551 GcpE protein ACX60_15605 PF13464 Domain of unknown function (DUF4115) ACX60_15615 PF04055 Radical SAM superfamily ACX60_15620 PF00334 Nucleoside diphosphate kinase ACX60_15625 PF04384 Iron-sulphur cluster assembly ACX60_15630 PF01569 PAP2 superfamily ACX60_15635 PF13439 Glycosyltransferase Family 4 ACX60_15635 PF00534 Glycosyl transferases group 1 ACX60_15640 PF17804 Tail specific protease N-terminal domain ACX60_15640 PF00595 PDZ domain ACX60_15640 PF11818 C-terminal domain of tail specific protease (DUF3340) ACX60_15640 PF03572 Peptidase family S41 ACX60_15645 PF00933 Glycosyl hydrolase family 3 N terminal domain ACX60_15655 PF00561 alpha/beta hydrolase fold ACX60_15660 PF00171 Aldehyde dehydrogenase family ACX60_15665 PF00171 Aldehyde dehydrogenase family ACX60_15670 PF01202 Shikimate kinase ACX60_15675 PF02447 GntP family permease ACX60_15680 PF01081 KDPG and KHG aldolase ACX60_15685 PF00920 Dehydratase family ACX60_15690 PF00871 Acetokinase family ACX60_15695 PF01515 Phosphate acetyl/butaryl transferase ACX60_15695 PF07085 DRTGG domain ACX60_15700 PF05681 Fumarate hydratase (Fumerase) ACX60_15700 PF05683 Fumarase C-terminus ACX60_15715 PF06689 ClpX C4-type zinc finger ACX60_15715 PF07724 AAA domain (Cdc48 subfamily) ACX60_15715 PF10431 C-terminal, D2-small domain, of ClpB protein ACX60_15720 PF00574 Clp protease ACX60_15725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_15725 PF05698 Bacterial trigger factor protein (TF) C-terminus ACX60_15725 PF05697 Bacterial trigger factor protein (TF) ACX60_15730 PF07715 TonB-dependent Receptor Plug Domain ACX60_15730 PF00593 TonB dependent receptor ACX60_15735 PF18331 PKHD-type hydroxylase C-terminal domain ACX60_15735 PF13640 2OG-Fe(II) oxygenase superfamily ACX60_15740 PF00682 HMGL-like ACX60_15740 PF08502 LeuA allosteric (dimerisation) domain ACX60_15745 PF00561 alpha/beta hydrolase fold ACX60_15750 PF00561 alpha/beta hydrolase fold ACX60_15750 PF07021 Methionine biosynthesis protein MetW ACX60_15760 PF01725 Ham1 family ACX60_15770 PF02416 mttA/Hcf106 family ACX60_15775 PF02416 mttA/Hcf106 family ACX60_15780 PF00902 Sec-independent protein translocase protein (TatC) ACX60_15800 PF01790 Prolipoprotein diacylglyceryl transferase ACX60_15815 PF00303 Thymidylate synthase ACX60_15820 PF00186 Dihydrofolate reductase ACX60_15830 PF01625 Peptide methionine sulfoxide reductase ACX60_15840 PF01618 MotA/TolQ/ExbB proton channel family ACX60_15850 PF00551 Formyl transferase ACX60_15850 PF01842 ACT domain ACX60_15860 PF00171 Aldehyde dehydrogenase family ACX60_15865 PF00830 Ribosomal L28 family ACX60_15870 PF00471 Ribosomal protein L33 ACX60_15875 PF02254 TrkA-N domain ACX60_15875 PF00999 Sodium/hydrogen exchanger family ACX60_15895 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ACX60_15900 PF00580 UvrD/REP helicase N-terminal domain ACX60_15900 PF13361 UvrD-like helicase C-terminal domain ACX60_15915 PF01131 DNA topoisomerase ACX60_15915 PF01396 Topoisomerase DNA binding C4 zinc finger ACX60_15915 PF08272 Topoisomerase I zinc-ribbon-like ACX60_15915 PF01751 Toprim domain ACX60_15925 PF01638 HxlR-like helix-turn-helix ACX60_15930 PF00107 Zinc-binding dehydrogenase ACX60_15930 PF08240 Alcohol dehydrogenase GroES-like domain ACX60_15945 PF01810 LysE type translocator ACX60_15950 PF03279 Bacterial lipid A biosynthesis acyltransferase ACX60_15960 PF00375 Sodium:dicarboxylate symporter family ACX60_15970 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACX60_15970 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACX60_15990 PF01416 tRNA pseudouridine synthase ACX60_16000 PF01176 Translation initiation factor 1A / IF-1 ACX60_16015 PF00180 Isocitrate/isopropylmalate dehydrogenase ACX60_16025 PF00694 Aconitase C-terminal domain ACX60_16030 PF00330 Aconitase family (aconitate hydratase) ACX60_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_16040 PF03466 LysR substrate binding domain ACX60_16050 PF00293 NUDIX domain ACX60_16055 PF02896 PEP-utilising enzyme, TIM barrel domain ACX60_16055 PF01590 GAF domain ACX60_16055 PF05524 PEP-utilising enzyme, N-terminal ACX60_16055 PF00391 PEP-utilising enzyme, mobile domain ACX60_16060 PF00141 Peroxidase ACX60_16065 PF12706 Beta-lactamase superfamily domain ACX60_16070 PF03466 LysR substrate binding domain ACX60_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_16080 PF02798 Glutathione S-transferase, N-terminal domain ACX60_16085 PF13280 WYL domain ACX60_16085 PF08279 HTH domain ACX60_16090 PF13419 Haloacid dehalogenase-like hydrolase ACX60_16095 PF00849 RNA pseudouridylate synthase ACX60_16095 PF01479 S4 domain ACX60_16100 PF00575 S1 RNA binding domain ACX60_16100 PF10150 Ribonuclease E/G family ACX60_16100 PF12111 Polyribonucleotide phosphorylase C terminal ACX60_16105 PF13193 AMP-binding enzyme C-terminal domain ACX60_16105 PF00501 AMP-binding enzyme ACX60_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_16120 PF03466 LysR substrate binding domain ACX60_16130 PF04055 Radical SAM superfamily ACX60_16130 PF06969 HemN C-terminal domain ACX60_16140 PF01554 MatE ACX60_16145 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_16145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACX60_16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_16150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_16150 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACX60_16155 PF03109 ABC1 family ACX60_16160 PF01197 Ribosomal protein L31 ACX60_16170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACX60_16190 PF03884 DNA gyrase inhibitor YacG ACX60_16195 PF00753 Metallo-beta-lactamase superfamily ACX60_16200 PF00762 Ferrochelatase ACX60_16210 PF01177 Asp/Glu/Hydantoin racemase ACX60_16230 PF01206 Sulfurtransferase TusA ACX60_16235 PF00571 CBS domain ACX60_16235 PF03471 Transporter associated domain ACX60_16240 PF00795 Carbon-nitrogen hydrolase ACX60_16245 PF01588 Putative tRNA binding domain ACX60_16255 PF07963 Prokaryotic N-terminal methylation motif ACX60_16255 PF08334 Type II secretion system (T2SS), protein G ACX60_16260 PF00482 Type II secretion system (T2SS), protein F ACX60_16265 PF00270 DEAD/DEAH box helicase ACX60_16265 PF18074 Primosomal protein N C-terminal domain ACX60_16265 PF17764 3′ DNA-binding domain (3′BD) ACX60_16265 PF00271 Helicase conserved C-terminal domain ACX60_16265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACX60_16270 PF00999 Sodium/hydrogen exchanger family ACX60_16270 PF02254 TrkA-N domain ACX60_16275 PF01430 Hsp33 protein ACX60_16285 PF01556 DnaJ C terminal domain ACX60_16285 PF00226 DnaJ domain ACX60_16295 PF01544 CorA-like Mg2+ transporter protein ACX60_16300 PF00575 S1 RNA binding domain ACX60_16300 PF01138 3' exoribonuclease family, domain 1 ACX60_16300 PF03725 3' exoribonuclease family, domain 2 ACX60_16300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACX60_16300 PF00013 KH domain ACX60_16305 PF00312 Ribosomal protein S15 ACX60_16315 PF13538 UvrD-like helicase C-terminal domain ACX60_16320 PF12705 PD-(D/E)XK nuclease superfamily ACX60_16320 PF00580 UvrD/REP helicase N-terminal domain ACX60_16320 PF13361 UvrD-like helicase C-terminal domain ACX60_16325 PF17946 RecC C-terminal domain ACX60_16335 PF03976 Polyphosphate kinase 2 (PPK2) ACX60_16345 PF01209 ubiE/COQ5 methyltransferase family ACX60_16355 PF03109 ABC1 family ACX60_16360 PF01494 FAD binding domain ACX60_16365 PF01502 Phosphoribosyl-AMP cyclohydrolase ACX60_16380 PF00361 Proton-conducting membrane transporter ACX60_16380 PF13244 Domain of unknown function (DUF4040) ACX60_16380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACX60_16380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACX60_16385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACX60_16390 PF00361 Proton-conducting membrane transporter ACX60_16400 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACX60_16410 PF02033 Ribosome-binding factor A ACX60_16415 PF00009 Elongation factor Tu GTP binding domain ACX60_16415 PF08364 Bacterial translation initiation factor IF-2 associated region ACX60_16415 PF04760 Translation initiation factor IF-2, N-terminal region ACX60_16415 PF11987 Translation-initiation factor 2 ACX60_16420 PF08529 NusA N-terminal domain ACX60_16420 PF13184 NusA-like KH domain ACX60_16420 PF00575 S1 RNA binding domain ACX60_16425 PF17384 RimP C-terminal SH3 domain ACX60_16425 PF02576 RimP N-terminal domain ACX60_16440 PF03840 Preprotein translocase SecG subunit ACX60_16445 PF00121 Triosephosphate isomerase ACX60_16450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACX60_16450 PF00437 Type II/IV secretion system protein ACX60_16455 PF00482 Type II secretion system (T2SS), protein F ACX60_16460 PF06750 Bacterial Peptidase A24 N-terminal domain ACX60_16460 PF01478 Type IV leader peptidase family ACX60_16465 PF01121 Dephospho-CoA kinase ACX60_16475 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACX60_16475 PF00588 SpoU rRNA Methylase family ACX60_16480 PF06865 Pyrimidine/purine nucleoside phosphorylase ACX60_16490 PF02463 RecF/RecN/SMC N terminal domain ACX60_16495 PF02622 Uncharacterized ACR, COG1678 ACX60_16500 PF03652 Holliday junction resolvase ACX60_16505 PF13533 Biotin-lipoyl like ACX60_16530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACX60_16530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACX60_16530 PF12833 Helix-turn-helix domain ACX60_16530 PF02805 Metal binding domain of Ada ACX60_16535 PF01066 CDP-alcohol phosphatidyltransferase ACX60_16545 PF01541 GIY-YIG catalytic domain ACX60_16545 PF08459 UvrC Helix-hairpin-helix N-terminal ACX60_16545 PF02151 UvrB/uvrC motif ACX60_16560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACX60_16560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACX60_16560 PF00378 Enoyl-CoA hydratase/isomerase ACX60_16565 PF02803 Thiolase, C-terminal domain ACX60_16565 PF00108 Thiolase, N-terminal domain ACX60_16590 PF09278 MerR, DNA binding ACX60_16590 PF00376 MerR family regulatory protein ACX60_16600 PF01323 DSBA-like thioredoxin domain ACX60_16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_16615 PF00183 Hsp90 protein ACX60_16630 PF13726 Na+-H+ antiporter family ACX60_16630 PF03553 Na+/H+ antiporter family ACX60_16635 PF00561 alpha/beta hydrolase fold ACX60_16655 PF00623 RNA polymerase Rpb1, domain 2 ACX60_16655 PF04983 RNA polymerase Rpb1, domain 3 ACX60_16655 PF05000 RNA polymerase Rpb1, domain 4 ACX60_16655 PF04998 RNA polymerase Rpb1, domain 5 ACX60_16655 PF04997 RNA polymerase Rpb1, domain 1 ACX60_16660 PF04560 RNA polymerase Rpb2, domain 7 ACX60_16660 PF04561 RNA polymerase Rpb2, domain 2 ACX60_16660 PF04565 RNA polymerase Rpb2, domain 3 ACX60_16660 PF10385 RNA polymerase beta subunit external 1 domain ACX60_16660 PF04563 RNA polymerase beta subunit ACX60_16660 PF00562 RNA polymerase Rpb2, domain 6 ACX60_16665 PF16320 Ribosomal protein L7/L12 dimerisation domain ACX60_16665 PF00542 Ribosomal protein L7/L12 C-terminal domain ACX60_16670 PF00466 Ribosomal protein L10 ACX60_16675 PF00687 Ribosomal protein L1p/L10e family ACX60_16680 PF00298 Ribosomal protein L11, RNA binding domain ACX60_16680 PF03946 Ribosomal protein L11, N-terminal domain ACX60_16685 PF00467 KOW motif ACX60_16685 PF02357 Transcription termination factor nusG ACX60_16690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACX60_16700 PF00009 Elongation factor Tu GTP binding domain ACX60_16700 PF03143 Elongation factor Tu C-terminal domain ACX60_16700 PF03144 Elongation factor Tu domain 2 ACX60_16725 PF04715 Anthranilate synthase component I, N terminal region ACX60_16725 PF00425 chorismate binding enzyme ACX60_16730 PF13419 Haloacid dehalogenase-like hydrolase ACX60_16735 PF12401 Protein of unknown function (DUF2662) ACX60_16735 PF00498 FHA domain ACX60_16740 PF00263 Bacterial type II and III secretion system protein ACX60_16740 PF03958 Bacterial type II/III secretion system short domain ACX60_16755 PF00816 H-NS histone family ACX60_16780 PF03900 Porphobilinogen deaminase, C-terminal domain ACX60_16780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACX60_16785 PF00072 Response regulator receiver domain ACX60_16785 PF04397 LytTr DNA-binding domain ACX60_16790 PF07694 5TMR of 5TMR-LYT ACX60_16790 PF06580 Histidine kinase ACX60_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_16795 PF14698 Argininosuccinate lyase C-terminal ACX60_16795 PF00206 Lyase ACX60_16800 PF04362 Bacterial Fe(2+) trafficking ACX60_16805 PF01895 PhoU domain ACX60_16810 PF02321 Outer membrane efflux protein ACX60_16815 PF00892 EamA-like transporter family ACX60_16830 PF01964 Radical SAM ThiC family ACX60_16830 PF13667 ThiC-associated domain ACX60_16835 PF00293 NUDIX domain ACX60_16840 PF00149 Calcineurin-like phosphoesterase ACX60_16845 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACX60_16850 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACX60_16855 PF01098 Cell cycle protein ACX60_16860 PF08245 Mur ligase middle domain ACX60_16860 PF02875 Mur ligase family, glutamate ligase domain ACX60_16870 PF07670 Nucleoside recognition ACX60_16870 PF07664 Ferrous iron transport protein B C terminus ACX60_16870 PF02421 Ferrous iron transport protein B ACX60_16880 PF00589 Phage integrase family ACX60_16880 PF02899 Phage integrase, N-terminal SAM-like domain ACX60_16885 PF10411 Disulfide bond isomerase protein N-terminus ACX60_16885 PF13098 Thioredoxin-like domain ACX60_16890 PF00742 Homoserine dehydrogenase ACX60_16890 PF01842 ACT domain ACX60_16890 PF03447 Homoserine dehydrogenase, NAD binding domain ACX60_16895 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_16900 PF00768 D-alanyl-D-alanine carboxypeptidase ACX60_16905 PF00196 Bacterial regulatory proteins, luxR family ACX60_16905 PF00072 Response regulator receiver domain ACX60_16910 PF00512 His Kinase A (phospho-acceptor) domain ACX60_16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACX60_16915 PF00158 Sigma-54 interaction domain ACX60_16915 PF00072 Response regulator receiver domain ACX60_16915 PF02954 Bacterial regulatory protein, Fis family ACX60_16920 PF03572 Peptidase family S41 ACX60_16920 PF00595 PDZ domain ACX60_16925 PF01676 Metalloenzyme superfamily ACX60_16925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ACX60_16930 PF03739 Lipopolysaccharide export system permease LptF/LptG ACX60_16940 PF00883 Cytosol aminopeptidase family, catalytic domain ACX60_16940 PF02789 Cytosol aminopeptidase family, N-terminal domain ACX60_16960 PF00677 Lumazine binding domain ACX60_16970 PF01872 RibD C-terminal domain ACX60_16970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACX60_16975 PF03477 ATP cone domain ACX60_16980 PF00909 Ammonium Transporter Family ACX60_16985 PF00543 Nitrogen regulatory protein P-II ACX60_17005 PF01740 STAS domain ACX60_17005 PF00916 Sulfate permease family ACX60_17010 PF00582 Universal stress protein family ACX60_17040 PF00665 Integrase core domain ACX60_17060 PF00155 Aminotransferase class I and II ACX60_17060 PF00392 Bacterial regulatory proteins, gntR family ACX60_17070 PF00701 Dihydrodipicolinate synthetase family ACX60_17080 PF03573 outer membrane porin, OprD family ACX60_17085 PF00719 Inorganic pyrophosphatase ACX60_17100 PF13193 AMP-binding enzyme C-terminal domain ACX60_17100 PF00501 AMP-binding enzyme ACX60_17105 PF03989 DNA gyrase C-terminal domain, beta-propeller ACX60_17105 PF00521 DNA gyrase/topoisomerase IV, subunit A ACX60_17110 PF07690 Major Facilitator Superfamily ACX60_17115 PF03458 UPF0126 domain ACX60_17120 PF02810 SEC-C motif ACX60_17125 PF03741 Integral membrane protein TerC family ACX60_17125 PF03471 Transporter associated domain ACX60_17130 PF03641 Possible lysine decarboxylase ACX60_17135 PF07690 Major Facilitator Superfamily ACX60_17145 PF00817 impB/mucB/samB family ACX60_17145 PF11799 impB/mucB/samB family C-terminal domain ACX60_17145 PF11798 IMS family HHH motif ACX60_17160 PF04055 Radical SAM superfamily ACX60_17160 PF08497 Radical SAM N-terminal ACX60_17160 PF11842 Domain of unknown function (DUF3362) ACX60_17180 PF03358 NADPH-dependent FMN reductase ACX60_17190 PF00291 Pyridoxal-phosphate dependent enzyme ACX60_17225 PF00440 Bacterial regulatory proteins, tetR family ACX60_17250 PF01327 Polypeptide deformylase ACX60_17260 PF02481 DNA recombination-mediator protein A ACX60_17260 PF17782 DprA winged helix domain ACX60_17265 PF01300 Telomere recombination ACX60_17270 PF00892 EamA-like transporter family ACX60_17275 PF00440 Bacterial regulatory proteins, tetR family ACX60_17280 PF07690 Major Facilitator Superfamily ACX60_17290 PF00255 Glutathione peroxidase ACX60_17300 PF11008 Protein of unknown function (DUF2846) ACX60_17305 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACX60_17310 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACX60_17310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACX60_17315 PF00231 ATP synthase ACX60_17320 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACX60_17320 PF00306 ATP synthase alpha/beta chain, C terminal domain ACX60_17320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACX60_17325 PF00213 ATP synthase delta (OSCP) subunit ACX60_17330 PF00430 ATP synthase B/B' CF(0) ACX60_17335 PF00137 ATP synthase subunit C ACX60_17340 PF00119 ATP synthase A chain ACX60_17360 PF00005 ABC transporter ACX60_17365 PF00950 ABC 3 transport family ACX60_17370 PF01810 LysE type translocator ACX60_17375 PF04261 Dyp-type peroxidase family ACX60_17380 PF03949 Malic enzyme, NAD binding domain ACX60_17380 PF00390 Malic enzyme, N-terminal domain ACX60_17385 PF00750 tRNA synthetases class I (R) ACX60_17385 PF03485 Arginyl tRNA synthetase N terminal domain ACX60_17385 PF05746 DALR anticodon binding domain ACX60_17405 PF02678 Pirin ACX60_17405 PF05726 Pirin C-terminal cupin domain ACX60_17415 PF03551 Transcriptional regulator PadR-like family ACX60_17420 PF13427 Domain of unknown function (DUF4111) ACX60_17420 PF01909 Nucleotidyltransferase domain ACX60_17425 PF00958 GMP synthase C terminal domain ACX60_17425 PF00117 Glutamine amidotransferase class-I ACX60_17425 PF02540 NAD synthase ACX60_17430 PF04286 Protein of unknown function (DUF445) ACX60_17435 PF07681 DoxX ACX60_17440 PF09335 SNARE associated Golgi protein ACX60_17455 PF13614 AAA domain ACX60_17465 PF01722 BolA-like protein ACX60_17480 PF01648 4'-phosphopantetheinyl transferase superfamily ACX60_17485 PF16363 GDP-mannose 4,6 dehydratase ACX60_17500 PF00550 Phosphopantetheine attachment site ACX60_17500 PF00668 Condensation domain ACX60_17500 PF13193 AMP-binding enzyme C-terminal domain ACX60_17500 PF00501 AMP-binding enzyme ACX60_17500 PF00975 Thioesterase domain ACX60_17505 PF14765 Polyketide synthase dehydratase ACX60_17505 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_17505 PF16197 Ketoacyl-synthetase C-terminal extension ACX60_17505 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_17505 PF00975 Thioesterase domain ACX60_17505 PF08242 Methyltransferase domain ACX60_17505 PF00550 Phosphopantetheine attachment site ACX60_17510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_17510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_17510 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_17515 PF00501 AMP-binding enzyme ACX60_17520 PF00196 Bacterial regulatory proteins, luxR family ACX60_17520 PF03472 Autoinducer binding domain ACX60_17530 PF00765 Autoinducer synthase ACX60_17535 PF00083 Sugar (and other) transporter ACX60_17535 PF07690 Major Facilitator Superfamily ACX60_17540 PF00378 Enoyl-CoA hydratase/isomerase ACX60_17545 PF00378 Enoyl-CoA hydratase/isomerase ACX60_17550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACX60_17550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACX60_17550 PF02770 Acyl-CoA dehydrogenase, middle domain ACX60_17555 PF13193 AMP-binding enzyme C-terminal domain ACX60_17555 PF00501 AMP-binding enzyme ACX60_17560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACX60_17560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACX60_17565 PF00171 Aldehyde dehydrogenase family ACX60_17575 PF00324 Amino acid permease ACX60_17580 PF00324 Amino acid permease ACX60_17585 PF01042 Endoribonuclease L-PSP ACX60_17590 PF00842 Alanine racemase, C-terminal domain ACX60_17590 PF01168 Alanine racemase, N-terminal domain ACX60_17595 PF01266 FAD dependent oxidoreductase ACX60_17600 PF01037 Lrp/AsnC ligand binding domain ACX60_17610 PF00593 TonB dependent receptor ACX60_17610 PF07715 TonB-dependent Receptor Plug Domain ACX60_17625 PF00849 RNA pseudouridylate synthase ACX60_17675 PF02801 Beta-ketoacyl synthase, C-terminal domain ACX60_17675 PF00109 Beta-ketoacyl synthase, N-terminal domain ACX60_17695 PF00694 Aconitase C-terminal domain ACX60_17695 PF00330 Aconitase family (aconitate hydratase) ACX60_17700 PF00285 Citrate synthase, C-terminal domain ACX60_17710 PF00392 Bacterial regulatory proteins, gntR family ACX60_17710 PF07729 FCD domain ACX60_17715 PF00155 Aminotransferase class I and II ACX60_17720 PF09330 D-lactate dehydrogenase, membrane binding ACX60_17720 PF01565 FAD binding domain ACX60_17725 PF01070 FMN-dependent dehydrogenase ACX60_17730 PF07729 FCD domain ACX60_17730 PF00392 Bacterial regulatory proteins, gntR family ACX60_17735 PF02652 L-lactate permease ACX60_17740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACX60_17740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACX60_17740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACX60_17740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACX60_17745 PF16363 GDP-mannose 4,6 dehydratase ACX60_17750 PF00342 Phosphoglucose isomerase ACX60_17755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACX60_17755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACX60_17755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACX60_17760 PF00483 Nucleotidyl transferase ACX60_17765 PF02397 Bacterial sugar transferase ACX60_17770 PF00535 Glycosyl transferase family 2 ACX60_17775 PF00534 Glycosyl transferases group 1 ACX60_17790 PF13439 Glycosyltransferase Family 4 ACX60_17790 PF00534 Glycosyl transferases group 1 ACX60_17795 PF12464 Maltose acetyltransferase ACX60_17795 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_17795 PF14602 Hexapeptide repeat of succinyl-transferase ACX60_17805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACX60_17810 PF00132 Bacterial transferase hexapeptide (six repeats) ACX60_17815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACX60_17815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACX60_17820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACX60_17820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACX60_17820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACX60_17825 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ACX60_17825 PF10531 SLBB domain ACX60_17825 PF02563 Polysaccharide biosynthesis/export protein ACX60_17830 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACX60_17835 PF02706 Chain length determinant protein ACX60_17835 PF13614 AAA domain ACX60_17835 PF13807 G-rich domain on putative tyrosine kinase ACX60_17840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_17840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACX60_17845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_17845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACX60_17850 PF03023 Lipid II flippase MurJ ACX60_17855 PF01510 N-acetylmuramoyl-L-alanine amidase ACX60_17860 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACX60_17860 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACX60_17870 PF04185 Phosphoesterase family ACX60_17870 PF05506 Domain of unknown function (DUF756) ACX60_17875 PF03725 3' exoribonuclease family, domain 2 ACX60_17875 PF01138 3' exoribonuclease family, domain 1 ACX60_17880 PF00487 Fatty acid desaturase ACX60_17885 PF00175 Oxidoreductase NAD-binding domain ACX60_17890 PF00440 Bacterial regulatory proteins, tetR family ACX60_17895 PF00440 Bacterial regulatory proteins, tetR family ACX60_17895 PF08360 QacR-like protein, C-terminal region ACX60_17900 PF01323 DSBA-like thioredoxin domain ACX60_17910 PF13419 Haloacid dehalogenase-like hydrolase ACX60_17915 PF00106 short chain dehydrogenase ACX60_17930 PF00696 Amino acid kinase family ACX60_17930 PF00583 Acetyltransferase (GNAT) family ACX60_17935 PF09084 NMT1/THI5 like ACX60_17940 PF09084 NMT1/THI5 like ACX60_17945 PF00296 Luciferase-like monooxygenase ACX60_17950 PF00528 Binding-protein-dependent transport system inner membrane component ACX60_17955 PF00005 ABC transporter ACX60_17960 PF00440 Bacterial regulatory proteins, tetR family ACX60_17960 PF08362 YcdC-like protein, C-terminal region ACX60_17965 PF01048 Phosphorylase superfamily ACX60_17975 PF06574 FAD synthetase ACX60_17975 PF01687 Riboflavin kinase ACX60_17980 PF00133 tRNA synthetases class I (I, L, M and V) ACX60_17980 PF06827 Zinc finger found in FPG and IleRS ACX60_17980 PF08264 Anticodon-binding domain of tRNA ACX60_17985 PF01252 Signal peptidase (SPase) II ACX60_17990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACX60_18030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACX60_18035 PF07859 alpha/beta hydrolase fold ACX60_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACX60_18055 PF03466 LysR substrate binding domain ACX60_18060 PF01025 GrpE ACX60_18065 PF00012 Hsp70 protein ACX60_18085 PF13406 Transglycosylase SLT domain ACX60_18090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACX60_18090 PF02222 ATP-grasp domain ACX60_18095 PF00731 AIR carboxylase ACX60_18105 PF01225 Mur ligase family, catalytic domain ACX60_18105 PF02875 Mur ligase family, glutamate ligase domain ACX60_18105 PF08245 Mur ligase middle domain ACX60_18115 PF01569 PAP2 superfamily ACX60_18120 PF03741 Integral membrane protein TerC family ACX60_18130 PF03738 Glutathionylspermidine synthase preATP-grasp ACX60_18135 PF00355 Rieske [2Fe-2S] domain ACX60_18140 PF01979 Amidohydrolase family ACX60_18150 PF00156 Phosphoribosyl transferase domain ACX60_18160 PF13098 Thioredoxin-like domain ACX60_18160 PF10411 Disulfide bond isomerase protein N-terminus ACX60_18165 PF16916 Dimerisation domain of Zinc Transporter ACX60_18165 PF01545 Cation efflux family ACX60_18170 PF02583 Metal-sensitive transcriptional repressor ACX60_18175 PF12631 MnmE helical domain ACX60_18175 PF01926 50S ribosome-binding GTPase ACX60_18175 PF10396 GTP-binding protein TrmE N-terminus ACX60_18180 PF14849 YidC periplasmic domain ACX60_18180 PF02096 60Kd inner membrane protein ACX60_18185 PF01809 Putative membrane protein insertion efficiency factor ACX60_18190 PF00825 Ribonuclease P ACX60_18195 PF00468 Ribosomal protein L34 ACX60_18265 PF04225 Opacity-associated protein A LysM-like domain ACX60_18265 PF01551 Peptidase family M23 ACX60_18290 PF00717 Peptidase S24-like ACX60_18295 PF11798 IMS family HHH motif ACX60_18295 PF00817 impB/mucB/samB family ACX60_18295 PF13438 Domain of unknown function (DUF4113) ACX60_18295 PF11799 impB/mucB/samB family C-terminal domain ACX60_18305 PF02195 ParB-like nuclease domain ACX60_18305 PF17762 HTH domain found in ParB protein ACX60_18310 PF13614 AAA domain ACX60_18360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACX60_18360 PF00437 Type II/IV secretion system protein ACX60_18495 PF00565 Staphylococcal nuclease homologue ACX60_18575 PF01396 Topoisomerase DNA binding C4 zinc finger ACX60_18575 PF01751 Toprim domain ACX60_18575 PF01131 DNA topoisomerase ACX60_18600 PF07664 Ferrous iron transport protein B C terminus ACX60_18600 PF02421 Ferrous iron transport protein B ACX60_18600 PF07670 Nucleoside recognition ACX60_18620 PF01527 Transposase ACX60_18625 PF00665 Integrase core domain ACX60_18625 PF13333 Integrase core domain ACX60_18625 PF13276 HTH-like domain ACX60_18695 PF01758 Sodium Bile acid symporter family ACX60_18705 PF03358 NADPH-dependent FMN reductase ACX60_18715 PF02796 Helix-turn-helix domain of resolvase ACX60_18715 PF00239 Resolvase, N terminal domain ACX60_18730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACX60_18730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACX60_18730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACX60_18730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACX60_18735 PF00809 Pterin binding enzyme ACX60_18755 PF00665 Integrase core domain ACX60_18780 PF02899 Phage integrase, N-terminal SAM-like domain ACX60_18780 PF00589 Phage integrase family ACX60_18810 PF01740 STAS domain ACX60_18810 PF00916 Sulfate permease family ACX60_18815 PF00582 Universal stress protein family ACX60_18845 PF00665 Integrase core domain ACX60_18870 PF01435 Peptidase family M48 ACX60_18935 PF13737 Transposase DDE domain