locus-tag class description HKO16_00005 PF00308 Bacterial dnaA protein HKO16_00005 PF08299 Bacterial dnaA protein helix-turn-helix HKO16_00005 PF11638 DnaA N-terminal domain HKO16_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HKO16_00010 PF02767 DNA polymerase III beta subunit, central domain HKO16_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HKO16_00015 PF02463 RecF/RecN/SMC N terminal domain HKO16_00020 PF00204 DNA gyrase B HKO16_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HKO16_00020 PF18053 DNA gyrase B subunit insert domain HKO16_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_00020 PF01751 Toprim domain HKO16_00030 PF09335 SNARE associated Golgi protein HKO16_00035 PF12848 ABC transporter HKO16_00035 PF00005 ABC transporter HKO16_00055 PF01521 Iron-sulphur cluster biosynthesis HKO16_00060 PF00561 alpha/beta hydrolase fold HKO16_00065 PF03702 Anhydro-N-acetylmuramic acid kinase HKO16_00070 PF00579 tRNA synthetases class I (W and Y) HKO16_00110 PF00209 Sodium:neurotransmitter symporter family HKO16_00120 PF01029 NusB family HKO16_00120 PF01189 16S rRNA methyltransferase RsmB/F HKO16_00125 PF00551 Formyl transferase HKO16_00125 PF02911 Formyl transferase, C-terminal domain HKO16_00130 PF00920 Dehydratase family HKO16_00145 PF03466 LysR substrate binding domain HKO16_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_00150 PF00860 Permease family HKO16_00155 PF00311 Phosphoenolpyruvate carboxylase HKO16_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region HKO16_00160 PF00440 Bacterial regulatory proteins, tetR family HKO16_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_00170 PF00873 AcrB/AcrD/AcrF family HKO16_00180 PF00226 DnaJ domain HKO16_00180 PF01556 DnaJ C terminal domain HKO16_00180 PF00684 DnaJ central domain HKO16_00190 PF01113 Dihydrodipicolinate reductase, N-terminus HKO16_00190 PF05173 Dihydrodipicolinate reductase, C-terminus HKO16_00200 PF07690 Major Facilitator Superfamily HKO16_00205 PF00248 Aldo/keto reductase family HKO16_00210 PF03466 LysR substrate binding domain HKO16_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_00225 PF00392 Bacterial regulatory proteins, gntR family HKO16_00225 PF00155 Aminotransferase class I and II HKO16_00230 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_00230 PF00107 Zinc-binding dehydrogenase HKO16_00235 PF03352 Methyladenine glycosylase HKO16_00250 PF14815 NUDIX domain HKO16_00250 PF10576 Iron-sulfur binding domain of endonuclease III HKO16_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein HKO16_00250 PF00633 Helix-hairpin-helix motif HKO16_00265 PF07043 Protein of unknown function (DUF1328) HKO16_00270 PF03692 Putative zinc- or iron-chelating domain HKO16_00275 PF07995 Glucose / Sorbosone dehydrogenase HKO16_00280 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_00280 PF16193 AAA C-terminal domain HKO16_00280 PF12002 MgsA AAA+ ATPase C terminal HKO16_00285 PF01226 Formate/nitrite transporter HKO16_00295 PF01259 SAICAR synthetase HKO16_00305 PF00701 Dihydrodipicolinate synthetase family HKO16_00310 PF00857 Isochorismatase family HKO16_00315 PF01758 Sodium Bile acid symporter family HKO16_00320 PF01554 MatE HKO16_00325 PF04463 Protein of unknown function (DUF523) HKO16_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKO16_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKO16_00345 PF14497 Glutathione S-transferase, C-terminal domain HKO16_00345 PF02798 Glutathione S-transferase, N-terminal domain HKO16_00355 PF00324 Amino acid permease HKO16_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKO16_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKO16_00375 PF07702 UTRA domain HKO16_00375 PF00392 Bacterial regulatory proteins, gntR family HKO16_00385 PF17391 Urocanase N-terminal domain HKO16_00385 PF17392 Urocanase C-terminal domain HKO16_00385 PF01175 Urocanase Rossmann-like domain HKO16_00390 PF00221 Aromatic amino acid lyase HKO16_00395 PF00324 Amino acid permease HKO16_00400 PF01979 Amidohydrolase family HKO16_00405 PF00491 Arginase family HKO16_00420 PF01177 Asp/Glu/Hydantoin racemase HKO16_00425 PF01810 LysE type translocator HKO16_00440 PF01380 SIS domain HKO16_00445 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_00445 PF12804 MobA-like NTP transferase domain HKO16_00445 PF14602 Hexapeptide repeat of succinyl-transferase HKO16_00450 PF04608 Phosphatidylglycerophosphatase A HKO16_00455 PF02769 AIR synthase related protein, C-terminal domain HKO16_00455 PF00586 AIR synthase related protein, N-terminal domain HKO16_00460 PF01029 NusB family HKO16_00465 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKO16_00470 PF00925 GTP cyclohydrolase II HKO16_00470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKO16_00495 PF02580 D-Tyr-tRNA(Tyr) deacylase HKO16_00500 PF00199 Catalase HKO16_00500 PF06628 Catalase-related immune-responsive HKO16_00510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKO16_00510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKO16_00515 PF00581 Rhodanese-like domain HKO16_00520 PF02666 Phosphatidylserine decarboxylase HKO16_00530 PF11808 Phosphate regulon sensor protein PhoR HKO16_00530 PF00989 PAS fold HKO16_00530 PF00512 His Kinase A (phospho-acceptor) domain HKO16_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_00535 PF00072 Response regulator receiver domain HKO16_00535 PF00486 Transcriptional regulatory protein, C terminal HKO16_00545 PF00106 short chain dehydrogenase HKO16_00550 PF01554 MatE HKO16_00555 PF00155 Aminotransferase class I and II HKO16_00560 PF04286 Protein of unknown function (DUF445) HKO16_00575 PF04262 Glutamate-cysteine ligase HKO16_00580 PF02600 Disulfide bond formation protein DsbB HKO16_00615 PF07664 Ferrous iron transport protein B C terminus HKO16_00615 PF02421 Ferrous iron transport protein B HKO16_00615 PF07670 Nucleoside recognition HKO16_00635 PF01751 Toprim domain HKO16_00635 PF01131 DNA topoisomerase HKO16_00635 PF01396 Topoisomerase DNA binding C4 zinc finger HKO16_00710 PF00565 Staphylococcal nuclease homologue HKO16_00830 PF00437 Type II/IV secretion system protein HKO16_00830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKO16_00880 PF13614 AAA domain HKO16_00885 PF17762 HTH domain found in ParB protein HKO16_00885 PF02195 ParB-like nuclease domain HKO16_00895 PF11798 IMS family HHH motif HKO16_00895 PF11799 impB/mucB/samB family C-terminal domain HKO16_00895 PF00817 impB/mucB/samB family HKO16_00895 PF13438 Domain of unknown function (DUF4113) HKO16_00900 PF00717 Peptidase S24-like HKO16_00925 PF04225 Opacity-associated protein A LysM-like domain HKO16_00925 PF01551 Peptidase family M23 HKO16_01040 PF13737 Transposase DDE domain HKO16_01095 PF01435 Peptidase family M48 HKO16_01125 PF00665 Integrase core domain HKO16_01155 PF00582 Universal stress protein family HKO16_01160 PF01740 STAS domain HKO16_01160 PF00916 Sulfate permease family HKO16_01170 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKO16_01170 PF01078 Magnesium chelatase, subunit ChlI HKO16_01180 PF00543 Nitrogen regulatory protein P-II HKO16_01185 PF00909 Ammonium Transporter Family HKO16_01190 PF03477 ATP cone domain HKO16_01195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKO16_01195 PF01872 RibD C-terminal domain HKO16_01205 PF00677 Lumazine binding domain HKO16_01225 PF02789 Cytosol aminopeptidase family, N-terminal domain HKO16_01225 PF00883 Cytosol aminopeptidase family, catalytic domain HKO16_01235 PF03739 Lipopolysaccharide export system permease LptF/LptG HKO16_01240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HKO16_01240 PF01676 Metalloenzyme superfamily HKO16_01245 PF00595 PDZ domain HKO16_01245 PF03572 Peptidase family S41 HKO16_01250 PF00158 Sigma-54 interaction domain HKO16_01250 PF02954 Bacterial regulatory protein, Fis family HKO16_01250 PF00072 Response regulator receiver domain HKO16_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_01255 PF00512 His Kinase A (phospho-acceptor) domain HKO16_01260 PF00072 Response regulator receiver domain HKO16_01260 PF00196 Bacterial regulatory proteins, luxR family HKO16_01265 PF00768 D-alanyl-D-alanine carboxypeptidase HKO16_01270 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_01275 PF01842 ACT domain HKO16_01275 PF03447 Homoserine dehydrogenase, NAD binding domain HKO16_01275 PF00742 Homoserine dehydrogenase HKO16_01280 PF10411 Disulfide bond isomerase protein N-terminus HKO16_01280 PF13098 Thioredoxin-like domain HKO16_01285 PF02899 Phage integrase, N-terminal SAM-like domain HKO16_01285 PF00589 Phage integrase family HKO16_01295 PF07664 Ferrous iron transport protein B C terminus HKO16_01295 PF02421 Ferrous iron transport protein B HKO16_01295 PF07670 Nucleoside recognition HKO16_01305 PF08245 Mur ligase middle domain HKO16_01305 PF02875 Mur ligase family, glutamate ligase domain HKO16_01310 PF01098 Cell cycle protein HKO16_01315 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKO16_01320 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKO16_01325 PF00149 Calcineurin-like phosphoesterase HKO16_01330 PF00293 NUDIX domain HKO16_01335 PF01964 Radical SAM ThiC family HKO16_01335 PF13667 ThiC-associated domain HKO16_01350 PF00892 EamA-like transporter family HKO16_01355 PF02321 Outer membrane efflux protein HKO16_01360 PF01895 PhoU domain HKO16_01365 PF04362 Bacterial Fe(2+) trafficking HKO16_01370 PF00206 Lyase HKO16_01370 PF14698 Argininosuccinate lyase C-terminal HKO16_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_01375 PF07694 5TMR of 5TMR-LYT HKO16_01375 PF06580 Histidine kinase HKO16_01380 PF00072 Response regulator receiver domain HKO16_01380 PF04397 LytTr DNA-binding domain HKO16_01385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HKO16_01385 PF03900 Porphobilinogen deaminase, C-terminal domain HKO16_01410 PF13737 Transposase DDE domain HKO16_01415 PF00816 H-NS histone family HKO16_01430 PF03958 Bacterial type II/III secretion system short domain HKO16_01430 PF00263 Bacterial type II and III secretion system protein HKO16_01435 PF00498 FHA domain HKO16_01435 PF12401 Protein of unknown function (DUF2662) HKO16_01440 PF13419 Haloacid dehalogenase-like hydrolase HKO16_01445 PF04715 Anthranilate synthase component I, N terminal region HKO16_01445 PF00425 chorismate binding enzyme HKO16_01470 PF03143 Elongation factor Tu C-terminal domain HKO16_01470 PF03144 Elongation factor Tu domain 2 HKO16_01470 PF00009 Elongation factor Tu GTP binding domain HKO16_01480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HKO16_01485 PF02357 Transcription termination factor nusG HKO16_01485 PF00467 KOW motif HKO16_01490 PF00298 Ribosomal protein L11, RNA binding domain HKO16_01490 PF03946 Ribosomal protein L11, N-terminal domain HKO16_01495 PF00687 Ribosomal protein L1p/L10e family HKO16_01500 PF00466 Ribosomal protein L10 HKO16_01505 PF16320 Ribosomal protein L7/L12 dimerisation domain HKO16_01505 PF00542 Ribosomal protein L7/L12 C-terminal domain HKO16_01510 PF04563 RNA polymerase beta subunit HKO16_01510 PF04561 RNA polymerase Rpb2, domain 2 HKO16_01510 PF04560 RNA polymerase Rpb2, domain 7 HKO16_01510 PF04565 RNA polymerase Rpb2, domain 3 HKO16_01510 PF10385 RNA polymerase beta subunit external 1 domain HKO16_01510 PF00562 RNA polymerase Rpb2, domain 6 HKO16_01515 PF04997 RNA polymerase Rpb1, domain 1 HKO16_01515 PF00623 RNA polymerase Rpb1, domain 2 HKO16_01515 PF05000 RNA polymerase Rpb1, domain 4 HKO16_01515 PF04998 RNA polymerase Rpb1, domain 5 HKO16_01515 PF04983 RNA polymerase Rpb1, domain 3 HKO16_01535 PF00561 alpha/beta hydrolase fold HKO16_01540 PF03553 Na+/H+ antiporter family HKO16_01540 PF13726 Na+-H+ antiporter family HKO16_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_01555 PF00183 Hsp90 protein HKO16_01570 PF01323 DSBA-like thioredoxin domain HKO16_01580 PF00376 MerR family regulatory protein HKO16_01580 PF09278 MerR, DNA binding HKO16_01605 PF00108 Thiolase, N-terminal domain HKO16_01605 PF02803 Thiolase, C-terminal domain HKO16_01610 PF00378 Enoyl-CoA hydratase/isomerase HKO16_01610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKO16_01610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKO16_01625 PF01541 GIY-YIG catalytic domain HKO16_01625 PF08459 UvrC Helix-hairpin-helix N-terminal HKO16_01625 PF02151 UvrB/uvrC motif HKO16_01635 PF01066 CDP-alcohol phosphatidyltransferase HKO16_01640 PF02805 Metal binding domain of Ada HKO16_01640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKO16_01640 PF12833 Helix-turn-helix domain HKO16_01640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKO16_01665 PF13533 Biotin-lipoyl like HKO16_01670 PF03652 Holliday junction resolvase HKO16_01675 PF02622 Uncharacterized ACR, COG1678 HKO16_01680 PF02463 RecF/RecN/SMC N terminal domain HKO16_01690 PF06865 Pyrimidine/purine nucleoside phosphorylase HKO16_01695 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKO16_01695 PF00588 SpoU rRNA Methylase family HKO16_01705 PF01121 Dephospho-CoA kinase HKO16_01710 PF06750 Bacterial Peptidase A24 N-terminal domain HKO16_01710 PF01478 Type IV leader peptidase family HKO16_01715 PF00482 Type II secretion system (T2SS), protein F HKO16_01720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKO16_01720 PF00437 Type II/IV secretion system protein HKO16_01725 PF00121 Triosephosphate isomerase HKO16_01730 PF03840 Preprotein translocase SecG subunit HKO16_01745 PF17384 RimP C-terminal SH3 domain HKO16_01745 PF02576 RimP N-terminal domain HKO16_01750 PF08529 NusA N-terminal domain HKO16_01750 PF00575 S1 RNA binding domain HKO16_01750 PF13184 NusA-like KH domain HKO16_01755 PF04760 Translation initiation factor IF-2, N-terminal region HKO16_01755 PF08364 Bacterial translation initiation factor IF-2 associated region HKO16_01755 PF00009 Elongation factor Tu GTP binding domain HKO16_01755 PF11987 Translation-initiation factor 2 HKO16_01760 PF02033 Ribosome-binding factor A HKO16_01770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HKO16_01780 PF00361 Proton-conducting membrane transporter HKO16_01785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKO16_01790 PF13244 Domain of unknown function (DUF4040) HKO16_01790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HKO16_01790 PF00361 Proton-conducting membrane transporter HKO16_01790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKO16_01805 PF01502 Phosphoribosyl-AMP cyclohydrolase HKO16_01810 PF01494 FAD binding domain HKO16_01815 PF03109 ABC1 family HKO16_01825 PF01209 ubiE/COQ5 methyltransferase family HKO16_01835 PF03976 Polyphosphate kinase 2 (PPK2) HKO16_01845 PF17946 RecC C-terminal domain HKO16_01850 PF13361 UvrD-like helicase C-terminal domain HKO16_01850 PF00580 UvrD/REP helicase N-terminal domain HKO16_01850 PF12705 PD-(D/E)XK nuclease superfamily HKO16_01855 PF13538 UvrD-like helicase C-terminal domain HKO16_01865 PF00312 Ribosomal protein S15 HKO16_01870 PF00013 KH domain HKO16_01870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HKO16_01870 PF01138 3' exoribonuclease family, domain 1 HKO16_01870 PF03725 3' exoribonuclease family, domain 2 HKO16_01870 PF00575 S1 RNA binding domain HKO16_01875 PF01544 CorA-like Mg2+ transporter protein HKO16_01885 PF01556 DnaJ C terminal domain HKO16_01885 PF00226 DnaJ domain HKO16_01895 PF01430 Hsp33 protein HKO16_01900 PF02254 TrkA-N domain HKO16_01900 PF00999 Sodium/hydrogen exchanger family HKO16_01905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HKO16_01905 PF18074 Primosomal protein N C-terminal domain HKO16_01905 PF17764 3′ DNA-binding domain (3′BD) HKO16_01905 PF00271 Helicase conserved C-terminal domain HKO16_01905 PF00270 DEAD/DEAH box helicase HKO16_01910 PF00482 Type II secretion system (T2SS), protein F HKO16_01915 PF08334 Type II secretion system (T2SS), protein G HKO16_01915 PF07963 Prokaryotic N-terminal methylation motif HKO16_01925 PF01588 Putative tRNA binding domain HKO16_01930 PF00795 Carbon-nitrogen hydrolase HKO16_01935 PF03471 Transporter associated domain HKO16_01935 PF00571 CBS domain HKO16_01940 PF01206 Sulfurtransferase TusA HKO16_01960 PF01177 Asp/Glu/Hydantoin racemase HKO16_01970 PF00762 Ferrochelatase HKO16_01975 PF00753 Metallo-beta-lactamase superfamily HKO16_01980 PF03884 DNA gyrase inhibitor YacG HKO16_02000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HKO16_02010 PF01197 Ribosomal protein L31 HKO16_02015 PF03109 ABC1 family HKO16_02020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKO16_02020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_02025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKO16_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_02025 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_02030 PF01554 MatE HKO16_02040 PF04055 Radical SAM superfamily HKO16_02040 PF06969 HemN C-terminal domain HKO16_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_02050 PF03466 LysR substrate binding domain HKO16_02065 PF13193 AMP-binding enzyme C-terminal domain HKO16_02065 PF00501 AMP-binding enzyme HKO16_02070 PF10150 Ribonuclease E/G family HKO16_02070 PF00575 S1 RNA binding domain HKO16_02070 PF12111 Polyribonucleotide phosphorylase C terminal HKO16_02080 PF00849 RNA pseudouridylate synthase HKO16_02080 PF01479 S4 domain HKO16_02085 PF13419 Haloacid dehalogenase-like hydrolase HKO16_02090 PF13280 WYL domain HKO16_02090 PF08279 HTH domain HKO16_02095 PF02798 Glutathione S-transferase, N-terminal domain HKO16_02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_02105 PF03466 LysR substrate binding domain HKO16_02110 PF12706 Beta-lactamase superfamily domain HKO16_02115 PF00141 Peroxidase HKO16_02120 PF01590 GAF domain HKO16_02120 PF05524 PEP-utilising enzyme, N-terminal HKO16_02120 PF00391 PEP-utilising enzyme, mobile domain HKO16_02120 PF02896 PEP-utilising enzyme, TIM barrel domain HKO16_02125 PF00293 NUDIX domain HKO16_02135 PF03466 LysR substrate binding domain HKO16_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_02145 PF00330 Aconitase family (aconitate hydratase) HKO16_02150 PF00694 Aconitase C-terminal domain HKO16_02160 PF00180 Isocitrate/isopropylmalate dehydrogenase HKO16_02175 PF01176 Translation initiation factor 1A / IF-1 HKO16_02185 PF01416 tRNA pseudouridine synthase HKO16_02205 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKO16_02205 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKO16_02215 PF00375 Sodium:dicarboxylate symporter family HKO16_02225 PF03279 Bacterial lipid A biosynthesis acyltransferase HKO16_02230 PF01810 LysE type translocator HKO16_02240 PF04102 SlyX HKO16_02245 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_02245 PF00107 Zinc-binding dehydrogenase HKO16_02250 PF01638 HxlR-like helix-turn-helix HKO16_02260 PF08272 Topoisomerase I zinc-ribbon-like HKO16_02260 PF01396 Topoisomerase DNA binding C4 zinc finger HKO16_02260 PF01131 DNA topoisomerase HKO16_02260 PF01751 Toprim domain HKO16_02275 PF00580 UvrD/REP helicase N-terminal domain HKO16_02275 PF13361 UvrD-like helicase C-terminal domain HKO16_02280 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HKO16_02300 PF02254 TrkA-N domain HKO16_02300 PF00999 Sodium/hydrogen exchanger family HKO16_02305 PF00471 Ribosomal protein L33 HKO16_02310 PF00830 Ribosomal L28 family HKO16_02315 PF00171 Aldehyde dehydrogenase family HKO16_02325 PF00551 Formyl transferase HKO16_02325 PF01842 ACT domain HKO16_02335 PF01618 MotA/TolQ/ExbB proton channel family HKO16_02345 PF01625 Peptide methionine sulfoxide reductase HKO16_02355 PF00186 Dihydrofolate reductase HKO16_02360 PF00303 Thymidylate synthase HKO16_02375 PF01790 Prolipoprotein diacylglyceryl transferase HKO16_02395 PF00902 Sec-independent protein translocase protein (TatC) HKO16_02400 PF02416 mttA/Hcf106 family HKO16_02405 PF02416 mttA/Hcf106 family HKO16_02415 PF01725 Ham1 family HKO16_02425 PF00561 alpha/beta hydrolase fold HKO16_02425 PF07021 Methionine biosynthesis protein MetW HKO16_02430 PF00561 alpha/beta hydrolase fold HKO16_02440 PF18331 PKHD-type hydroxylase C-terminal domain HKO16_02440 PF13640 2OG-Fe(II) oxygenase superfamily HKO16_02445 PF00593 TonB dependent receptor HKO16_02445 PF07715 TonB-dependent Receptor Plug Domain HKO16_02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_02450 PF05698 Bacterial trigger factor protein (TF) C-terminus HKO16_02450 PF05697 Bacterial trigger factor protein (TF) HKO16_02455 PF00574 Clp protease HKO16_02460 PF10431 C-terminal, D2-small domain, of ClpB protein HKO16_02460 PF06689 ClpX C4-type zinc finger HKO16_02460 PF07724 AAA domain (Cdc48 subfamily) HKO16_02475 PF05683 Fumarase C-terminus HKO16_02475 PF05681 Fumarate hydratase (Fumerase) HKO16_02480 PF07085 DRTGG domain HKO16_02480 PF01515 Phosphate acetyl/butaryl transferase HKO16_02485 PF00871 Acetokinase family HKO16_02490 PF00920 Dehydratase family HKO16_02495 PF01081 KDPG and KHG aldolase HKO16_02500 PF02447 GntP family permease HKO16_02505 PF01202 Shikimate kinase HKO16_02510 PF00171 Aldehyde dehydrogenase family HKO16_02515 PF00171 Aldehyde dehydrogenase family HKO16_02520 PF00561 alpha/beta hydrolase fold HKO16_02530 PF00933 Glycosyl hydrolase family 3 N terminal domain HKO16_02535 PF17804 Tail specific protease N-terminal domain HKO16_02535 PF00595 PDZ domain HKO16_02535 PF03572 Peptidase family S41 HKO16_02535 PF11818 C-terminal domain of tail specific protease (DUF3340) HKO16_02540 PF13439 Glycosyltransferase Family 4 HKO16_02540 PF00534 Glycosyl transferases group 1 HKO16_02545 PF01569 PAP2 superfamily HKO16_02550 PF04384 Iron-sulphur cluster assembly HKO16_02555 PF00334 Nucleoside diphosphate kinase HKO16_02560 PF04055 Radical SAM superfamily HKO16_02570 PF13464 Domain of unknown function (DUF4115) HKO16_02575 PF04551 GcpE protein HKO16_02580 PF13393 Histidyl-tRNA synthetase HKO16_02580 PF03129 Anticodon binding domain HKO16_02590 PF13360 PQQ-like domain HKO16_02595 PF01926 50S ribosome-binding GTPase HKO16_02595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKO16_02610 PF00550 Phosphopantetheine attachment site HKO16_02615 PF00550 Phosphopantetheine attachment site HKO16_02625 PF00501 AMP-binding enzyme HKO16_02625 PF13193 AMP-binding enzyme C-terminal domain HKO16_02630 PF00535 Glycosyl transferase family 2 HKO16_02640 PF00221 Aromatic amino acid lyase HKO16_02660 PF04820 Tryptophan halogenase HKO16_02670 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_02670 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_02685 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_02685 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_02700 PF02556 Preprotein translocase subunit SecB HKO16_02705 PF00462 Glutaredoxin HKO16_02715 PF03193 RsgA GTPase HKO16_02720 PF00929 Exonuclease HKO16_02735 PF02321 Outer membrane efflux protein HKO16_02740 PF02687 FtsX-like permease family HKO16_02740 PF00005 ABC transporter HKO16_02740 PF12704 MacB-like periplasmic core domain HKO16_02745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_02760 PF09334 tRNA synthetases class I (M) HKO16_02760 PF13603 Leucyl-tRNA synthetase, Domain 2 HKO16_02760 PF08264 Anticodon-binding domain of tRNA HKO16_02760 PF00133 tRNA synthetases class I (I, L, M and V) HKO16_02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKO16_02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKO16_02770 PF00205 Thiamine pyrophosphate enzyme, central domain HKO16_02775 PF10369 Small subunit of acetolactate synthase HKO16_02780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HKO16_02780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HKO16_02785 PF00563 EAL domain HKO16_02785 PF00990 Diguanylate cyclase, GGDEF domain HKO16_02785 PF03707 Bacterial signalling protein N terminal repeat HKO16_02805 PF16671 Actin cross-linking domain HKO16_02805 PF04717 Type VI secretion system, phage-baseplate injector HKO16_02825 PF00009 Elongation factor Tu GTP binding domain HKO16_02825 PF03144 Elongation factor Tu domain 2 HKO16_02825 PF16658 Class II release factor RF3, C-terminal domain HKO16_02840 PF01026 TatD related DNase HKO16_02845 PF00694 Aconitase C-terminal domain HKO16_02845 PF00330 Aconitase family (aconitate hydratase) HKO16_02850 PF00899 ThiF family HKO16_02860 PF03466 LysR substrate binding domain HKO16_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_02870 PF01207 Dihydrouridine synthase (Dus) HKO16_02875 PF07690 Major Facilitator Superfamily HKO16_02885 PF00892 EamA-like transporter family HKO16_02890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HKO16_02890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HKO16_02895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HKO16_02900 PF02233 NAD(P) transhydrogenase beta subunit HKO16_02905 PF00106 short chain dehydrogenase HKO16_02915 PF01261 Xylose isomerase-like TIM barrel HKO16_02920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKO16_02920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKO16_02925 PF00378 Enoyl-CoA hydratase/isomerase HKO16_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_02930 PF00512 His Kinase A (phospho-acceptor) domain HKO16_02930 PF01627 Hpt domain HKO16_02930 PF00072 Response regulator receiver domain HKO16_02930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKO16_02930 PF00672 HAMP domain HKO16_02935 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_02945 PF05958 tRNA (Uracil-5-)-methyltransferase HKO16_02950 PF02824 TGS domain HKO16_02950 PF04607 Region found in RelA / SpoT proteins HKO16_02950 PF13291 ACT domain HKO16_02960 PF03819 MazG nucleotide pyrophosphohydrolase domain HKO16_02970 PF12626 Polymerase A arginine-rich C-terminus HKO16_02970 PF01743 Poly A polymerase head domain HKO16_02970 PF12627 Probable RNA and SrmB- binding site of polymerase A HKO16_02975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKO16_02980 PF02548 Ketopantoate hydroxymethyltransferase HKO16_02985 PF02569 Pantoate-beta-alanine ligase HKO16_02990 PF03668 P-loop ATPase protein family HKO16_02995 PF00381 PTS HPr component phosphorylation site HKO16_03000 PF04751 Protein of unknown function (DUF615) HKO16_03005 PF13193 AMP-binding enzyme C-terminal domain HKO16_03005 PF00501 AMP-binding enzyme HKO16_03010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKO16_03010 PF02824 TGS domain HKO16_03010 PF03129 Anticodon binding domain HKO16_03010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKO16_03015 PF05198 Translation initiation factor IF-3, N-terminal domain HKO16_03015 PF00707 Translation initiation factor IF-3, C-terminal domain HKO16_03020 PF00043 Glutathione S-transferase, C-terminal domain HKO16_03020 PF02798 Glutathione S-transferase, N-terminal domain HKO16_03025 PF09335 SNARE associated Golgi protein HKO16_03030 PF07690 Major Facilitator Superfamily HKO16_03035 PF01632 Ribosomal protein L35 HKO16_03040 PF00453 Ribosomal protein L20 HKO16_03060 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HKO16_03060 PF01409 tRNA synthetases class II core domain (F) HKO16_03065 PF03483 B3/4 domain HKO16_03065 PF03484 tRNA synthetase B5 domain HKO16_03065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HKO16_03065 PF03147 Ferredoxin-fold anticodon binding domain HKO16_03065 PF01588 Putative tRNA binding domain HKO16_03070 PF00216 Bacterial DNA-binding protein HKO16_03085 PF07497 Rho termination factor, RNA-binding domain HKO16_03085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKO16_03085 PF07498 Rho termination factor, N-terminal domain HKO16_03090 PF00085 Thioredoxin HKO16_03095 PF02541 Ppx/GppA phosphatase family HKO16_03100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HKO16_03105 PF11734 TilS substrate C-terminal domain HKO16_03105 PF09179 TilS substrate binding domain HKO16_03105 PF01171 PP-loop family HKO16_03110 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKO16_03110 PF03807 NADP oxidoreductase coenzyme F420-dependent HKO16_03115 PF02325 YGGT family HKO16_03120 PF00476 DNA polymerase family A HKO16_03120 PF01367 5'-3' exonuclease, C-terminal SAM fold HKO16_03120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKO16_03120 PF01612 3'-5' exonuclease HKO16_03140 PF00437 Type II/IV secretion system protein HKO16_03145 PF02566 OsmC-like protein HKO16_03150 PF01047 MarR family HKO16_03160 PF00795 Carbon-nitrogen hydrolase HKO16_03205 PF04552 Sigma-54, DNA binding domain HKO16_03205 PF04963 Sigma-54 factor, core binding domain HKO16_03205 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKO16_03210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HKO16_03215 PF01722 BolA-like protein HKO16_03220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKO16_03225 PF01634 ATP phosphoribosyltransferase HKO16_03230 PF00815 Histidinol dehydrogenase HKO16_03235 PF00155 Aminotransferase class I and II HKO16_03240 PF04715 Anthranilate synthase component I, N terminal region HKO16_03240 PF00425 chorismate binding enzyme HKO16_03280 PF00293 NUDIX domain HKO16_03285 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_03290 PF00814 Glycoprotease family HKO16_03295 PF04445 Putative SAM-dependent methyltransferase HKO16_03305 PF00756 Putative esterase HKO16_03315 PF00834 Ribulose-phosphate 3 epimerase family HKO16_03330 PF00394 Multicopper oxidase HKO16_03330 PF07731 Multicopper oxidase HKO16_03330 PF07732 Multicopper oxidase HKO16_03345 PF00893 Small Multidrug Resistance protein HKO16_03350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKO16_03350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKO16_03355 PF01960 ArgJ family HKO16_03360 PF02445 Quinolinate synthetase A protein HKO16_03385 PF00962 Adenosine/AMP deaminase HKO16_03390 PF00107 Zinc-binding dehydrogenase HKO16_03390 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_03395 PF03466 LysR substrate binding domain HKO16_03400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_03400 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_03400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_03405 PF07690 Major Facilitator Superfamily HKO16_03410 PF02515 CoA-transferase family III HKO16_03420 PF14537 Cytochrome c3 HKO16_03420 PF00890 FAD binding domain HKO16_03425 PF03466 LysR substrate binding domain HKO16_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_03435 PF07690 Major Facilitator Superfamily HKO16_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_03440 PF03466 LysR substrate binding domain HKO16_03450 PF01546 Peptidase family M20/M25/M40 HKO16_03450 PF07687 Peptidase dimerisation domain HKO16_03455 PF12833 Helix-turn-helix domain HKO16_03455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKO16_03465 PF01810 LysE type translocator HKO16_03470 PF03466 LysR substrate binding domain HKO16_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_03480 PF08267 Cobalamin-independent synthase, N-terminal domain HKO16_03480 PF01717 Cobalamin-independent synthase, Catalytic domain HKO16_03485 PF01613 Flavin reductase like domain HKO16_03500 PF17074 Darcynin, domain of unknown function HKO16_03510 PF06594 Haemolysin-type calcium binding protein related domain HKO16_03510 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKO16_03515 PF17074 Darcynin, domain of unknown function HKO16_03530 PF00268 Ribonucleotide reductase, small chain HKO16_03540 PF02867 Ribonucleotide reductase, barrel domain HKO16_03540 PF00317 Ribonucleotide reductase, all-alpha domain HKO16_03540 PF03477 ATP cone domain HKO16_03545 PF00072 Response regulator receiver domain HKO16_03545 PF00486 Transcriptional regulatory protein, C terminal HKO16_03550 PF00672 HAMP domain HKO16_03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_03550 PF00512 His Kinase A (phospho-acceptor) domain HKO16_03560 PF00990 Diguanylate cyclase, GGDEF domain HKO16_03560 PF17151 Periplasmic sensor domain HKO16_03565 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HKO16_03570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HKO16_03575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HKO16_03575 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HKO16_03585 PF10531 SLBB domain HKO16_03585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HKO16_03585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HKO16_03590 PF00384 Molybdopterin oxidoreductase HKO16_03590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKO16_03590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HKO16_03595 PF00146 NADH dehydrogenase HKO16_03600 PF12838 4Fe-4S dicluster domain HKO16_03605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HKO16_03610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKO16_03615 PF00361 Proton-conducting membrane transporter HKO16_03615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKO16_03620 PF00361 Proton-conducting membrane transporter HKO16_03625 PF00361 Proton-conducting membrane transporter HKO16_03635 PF00313 'Cold-shock' DNA-binding domain HKO16_03645 PF03466 LysR substrate binding domain HKO16_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_03650 PF00970 Oxidoreductase FAD-binding domain HKO16_03650 PF00175 Oxidoreductase NAD-binding domain HKO16_03665 PF05552 Conserved TM helix HKO16_03680 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_03685 PF13533 Biotin-lipoyl like HKO16_03710 PF09334 tRNA synthetases class I (M) HKO16_03710 PF01588 Putative tRNA binding domain HKO16_03720 PF10609 NUBPL iron-transfer P-loop NTPase HKO16_03725 PF01048 Phosphorylase superfamily HKO16_03740 PF00692 dUTPase HKO16_03770 PF01207 Dihydrouridine synthase (Dus) HKO16_03780 PF02881 SRP54-type protein, helical bundle domain HKO16_03780 PF02978 Signal peptide binding domain HKO16_03780 PF00448 SRP54-type protein, GTPase domain HKO16_03785 PF03309 Type III pantothenate kinase HKO16_03795 PF01925 Sulfite exporter TauE/SafE HKO16_03805 PF02463 RecF/RecN/SMC N terminal domain HKO16_03805 PF06470 SMC proteins Flexible Hinge Domain HKO16_03815 PF12826 Helix-hairpin-helix motif HKO16_03815 PF03120 NAD-dependent DNA ligase OB-fold domain HKO16_03815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HKO16_03815 PF01653 NAD-dependent DNA ligase adenylation domain HKO16_03815 PF00533 BRCA1 C Terminus (BRCT) domain HKO16_03820 PF00210 Ferritin-like domain HKO16_03825 PF07690 Major Facilitator Superfamily HKO16_03830 PF00982 Glycosyltransferase family 20 HKO16_03835 PF02358 Trehalose-phosphatase HKO16_03840 PF12697 Alpha/beta hydrolase family HKO16_03840 PF08241 Methyltransferase domain HKO16_03845 PF04055 Radical SAM superfamily HKO16_03845 PF06968 Biotin and Thiamin Synthesis associated domain HKO16_03845 PF00202 Aminotransferase class-III HKO16_03850 PF00155 Aminotransferase class I and II HKO16_03865 PF01479 S4 domain HKO16_03865 PF00849 RNA pseudouridylate synthase HKO16_03870 PF04079 Segregation and condensation complex subunit ScpB HKO16_03875 PF02616 Segregation and condensation protein ScpA HKO16_03880 PF01300 Telomere recombination HKO16_03885 PF04315 Elongation factor P hydroxylase HKO16_03890 PF02620 Large ribosomal RNA subunit accumulation protein YceD HKO16_03895 PF01783 Ribosomal L32p protein family HKO16_03900 PF00698 Acyl transferase domain HKO16_03910 PF00550 Phosphopantetheine attachment site HKO16_03915 PF04972 BON domain HKO16_03915 PF01476 LysM domain HKO16_03920 PF03070 TENA/THI-4/PQQC family HKO16_03920 PF02581 Thiamine monophosphate synthase HKO16_03920 PF08543 Phosphomethylpyrimidine kinase HKO16_03930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKO16_03945 PF02261 Aspartate decarboxylase HKO16_03950 PF01195 Peptidyl-tRNA hydrolase HKO16_03955 PF01386 Ribosomal L25p family HKO16_03960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKO16_03960 PF14572 Phosphoribosyl synthetase-associated domain HKO16_03985 PF08544 GHMP kinases C terminal HKO16_03985 PF00288 GHMP kinases N terminal domain HKO16_03990 PF03550 Outer membrane lipoprotein LolB HKO16_04000 PF01488 Shikimate / quinate 5-dehydrogenase HKO16_04000 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HKO16_04000 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HKO16_04005 PF01807 CHC2 zinc finger HKO16_04005 PF10410 DnaB-helicase binding domain of primase HKO16_04005 PF08278 DNA primase DnaG DnaB-binding HKO16_04005 PF08275 DNA primase catalytic core, N-terminal domain HKO16_04010 PF13525 Outer membrane lipoprotein HKO16_04015 PF00849 RNA pseudouridylate synthase HKO16_04015 PF01479 S4 domain HKO16_04025 PF03358 NADPH-dependent FMN reductase HKO16_04030 PF01668 SmpB protein HKO16_04035 PF01467 Cytidylyltransferase-like HKO16_04040 PF00037 4Fe-4S binding domain HKO16_04060 PF03466 LysR substrate binding domain HKO16_04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_04065 PF00180 Isocitrate/isopropylmalate dehydrogenase HKO16_04070 PF02028 BCCT, betaine/carnitine/choline family transporter HKO16_04075 PF07859 alpha/beta hydrolase fold HKO16_04080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKO16_04080 PF00355 Rieske [2Fe-2S] domain HKO16_04085 PF00171 Aldehyde dehydrogenase family HKO16_04090 PF00175 Oxidoreductase NAD-binding domain HKO16_04090 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_04090 PF00970 Oxidoreductase FAD-binding domain HKO16_04105 PF02540 NAD synthase HKO16_04105 PF00795 Carbon-nitrogen hydrolase HKO16_04115 PF02678 Pirin HKO16_04115 PF05726 Pirin C-terminal cupin domain HKO16_04125 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_04125 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_04135 PF00164 Ribosomal protein S12/S23 HKO16_04140 PF00177 Ribosomal protein S7p/S5e HKO16_04145 PF14492 Elongation Factor G, domain II HKO16_04145 PF03764 Elongation factor G, domain IV HKO16_04145 PF03144 Elongation factor Tu domain 2 HKO16_04145 PF00679 Elongation factor G C-terminus HKO16_04145 PF00009 Elongation factor Tu GTP binding domain HKO16_04150 PF00009 Elongation factor Tu GTP binding domain HKO16_04150 PF03144 Elongation factor Tu domain 2 HKO16_04150 PF03143 Elongation factor Tu C-terminal domain HKO16_04165 PF00583 Acetyltransferase (GNAT) family HKO16_04170 PF04377 Arginine-tRNA-protein transferase, C terminus HKO16_04170 PF04376 Arginine-tRNA-protein transferase, N terminus HKO16_04175 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HKO16_04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_04185 PF17854 FtsK alpha domain HKO16_04185 PF09397 Ftsk gamma domain HKO16_04185 PF01580 FtsK/SpoIIIE family HKO16_04185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HKO16_04190 PF01810 LysE type translocator HKO16_04200 PF03776 Septum formation topological specificity factor MinE HKO16_04205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKO16_04210 PF03775 Septum formation inhibitor MinC, C-terminal domain HKO16_04220 PF01553 Acyltransferase HKO16_04225 PF00691 OmpA family HKO16_04225 PF13488 Glycine zipper HKO16_04230 PF00580 UvrD/REP helicase N-terminal domain HKO16_04230 PF13361 UvrD-like helicase C-terminal domain HKO16_04235 PF00692 dUTPase HKO16_04240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKO16_04240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKO16_04240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKO16_04240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKO16_04245 PF00696 Amino acid kinase family HKO16_04255 PF13230 Glutamine amidotransferases class-II HKO16_04260 PF01814 Hemerythrin HHE cation binding domain HKO16_04270 PF03658 RnfH family Ubiquitin HKO16_04275 PF04355 SmpA / OmlA family HKO16_04280 PF01475 Ferric uptake regulator family HKO16_04285 PF00437 Type II/IV secretion system protein HKO16_04290 PF00437 Type II/IV secretion system protein HKO16_04295 PF01168 Alanine racemase, N-terminal domain HKO16_04305 PF12320 Type 5 capsule protein repressor C-terminal domain HKO16_04305 PF00149 Calcineurin-like phosphoesterase HKO16_04325 PF08338 Domain of unknown function (DUF1731) HKO16_04325 PF01370 NAD dependent epimerase/dehydratase family HKO16_04330 PF01266 FAD dependent oxidoreductase HKO16_04335 PF00490 Delta-aminolevulinic acid dehydratase HKO16_04340 PF03061 Thioesterase superfamily HKO16_04345 PF13533 Biotin-lipoyl like HKO16_04350 PF07690 Major Facilitator Superfamily HKO16_04395 PF00083 Sugar (and other) transporter HKO16_04400 PF00701 Dihydrodipicolinate synthetase family HKO16_04425 PF13520 Amino acid permease HKO16_04430 PF02574 Homocysteine S-methyltransferase HKO16_04440 PF06039 Malate:quinone oxidoreductase (Mqo) HKO16_04445 PF05199 GMC oxidoreductase HKO16_04445 PF00732 GMC oxidoreductase HKO16_04450 PF00171 Aldehyde dehydrogenase family HKO16_04455 PF00440 Bacterial regulatory proteins, tetR family HKO16_04455 PF13977 BetI-type transcriptional repressor, C-terminal HKO16_04460 PF02028 BCCT, betaine/carnitine/choline family transporter HKO16_04465 PF02028 BCCT, betaine/carnitine/choline family transporter HKO16_04475 PF03061 Thioesterase superfamily HKO16_04485 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKO16_04485 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKO16_04490 PF00375 Sodium:dicarboxylate symporter family HKO16_04495 PF07152 YaeQ protein HKO16_04500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_04505 PF01522 Polysaccharide deacetylase HKO16_04505 PF14883 Hypothetical glycosyl hydrolase family 13 HKO16_04510 PF00535 Glycosyl transferase family 2 HKO16_04520 PF00378 Enoyl-CoA hydratase/isomerase HKO16_04535 PF09339 IclR helix-turn-helix domain HKO16_04535 PF01614 Bacterial transcriptional regulator HKO16_04540 PF00355 Rieske [2Fe-2S] domain HKO16_04550 PF00355 Rieske [2Fe-2S] domain HKO16_04560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKO16_04565 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_04565 PF14759 Reductase C-terminal HKO16_04570 PF07690 Major Facilitator Superfamily HKO16_04580 PF12697 Alpha/beta hydrolase family HKO16_04590 PF01958 Domain of unknown function DUF108 HKO16_04590 PF03447 Homoserine dehydrogenase, NAD binding domain HKO16_04595 PF00171 Aldehyde dehydrogenase family HKO16_04600 PF00205 Thiamine pyrophosphate enzyme, central domain HKO16_04600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKO16_04600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKO16_04610 PF07690 Major Facilitator Superfamily HKO16_04615 PF01327 Polypeptide deformylase HKO16_04620 PF04960 Glutaminase HKO16_04625 PF12833 Helix-turn-helix domain HKO16_04625 PF02311 AraC-like ligand binding domain HKO16_04630 PF07690 Major Facilitator Superfamily HKO16_04640 PF01263 Aldose 1-epimerase HKO16_04650 PF03466 LysR substrate binding domain HKO16_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_04660 PF07690 Major Facilitator Superfamily HKO16_04665 PF00456 Transketolase, thiamine diphosphate binding domain HKO16_04670 PF02779 Transketolase, pyrimidine binding domain HKO16_04670 PF02780 Transketolase, C-terminal domain HKO16_04675 PF02607 B12 binding domain HKO16_04675 PF02310 B12 binding domain HKO16_04675 PF00809 Pterin binding enzyme HKO16_04675 PF02574 Homocysteine S-methyltransferase HKO16_04675 PF02965 Vitamin B12 dependent methionine synthase, activation domain HKO16_04680 PF01384 Phosphate transporter family HKO16_04685 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_04700 PF03781 Sulfatase-modifying factor enzyme 1 HKO16_04705 PF00884 Sulfatase HKO16_04715 PF01106 NifU-like domain HKO16_04715 PF01521 Iron-sulphur cluster biosynthesis HKO16_04720 PF07715 TonB-dependent Receptor Plug Domain HKO16_04720 PF00593 TonB dependent receptor HKO16_04730 PF00561 alpha/beta hydrolase fold HKO16_04735 PF00484 Carbonic anhydrase HKO16_04740 PF13472 GDSL-like Lipase/Acylhydrolase family HKO16_04745 PF00005 ABC transporter HKO16_04755 PF01694 Rhomboid family HKO16_04760 PF00912 Transglycosylase HKO16_04765 PF13090 Polyphosphate kinase C-terminal domain 2 HKO16_04765 PF17941 Polyphosphate kinase C-terminal domain 1 HKO16_04765 PF13089 Polyphosphate kinase N-terminal domain HKO16_04765 PF02503 Polyphosphate kinase middle domain HKO16_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_04780 PF03466 LysR substrate binding domain HKO16_04785 PF00561 alpha/beta hydrolase fold HKO16_04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_04790 PF18113 Rubredoxin binding C-terminal domain HKO16_04795 PF00301 Rubredoxin HKO16_04810 PF00152 tRNA synthetases class II (D, K and N) HKO16_04810 PF01336 OB-fold nucleic acid binding domain HKO16_04815 PF14052 Capsule assembly protein Wzi HKO16_04825 PF01507 Phosphoadenosine phosphosulfate reductase family HKO16_04830 PF00009 Elongation factor Tu GTP binding domain HKO16_04845 PF03600 Citrate transporter HKO16_04850 PF00571 CBS domain HKO16_04850 PF01595 Cyclin M transmembrane N-terminal domain HKO16_04850 PF03471 Transporter associated domain HKO16_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_04855 PF03466 LysR substrate binding domain HKO16_04860 PF00463 Isocitrate lyase family HKO16_04875 PF01774 UreD urease accessory protein HKO16_04880 PF00547 Urease, gamma subunit HKO16_04885 PF00699 Urease beta subunit HKO16_04895 PF01979 Amidohydrolase family HKO16_04895 PF00449 Urease alpha-subunit, N-terminal domain HKO16_04900 PF05194 UreE urease accessory protein, C-terminal domain HKO16_04900 PF02814 UreE urease accessory protein, N-terminal domain HKO16_04905 PF01730 UreF HKO16_04910 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKO16_04925 PF03717 Penicillin-binding Protein dimerisation domain HKO16_04925 PF00905 Penicillin binding protein transpeptidase domain HKO16_04940 PF05191 Adenylate kinase, active site lid HKO16_04950 PF10576 Iron-sulfur binding domain of endonuclease III HKO16_04950 PF00730 HhH-GPD superfamily base excision DNA repair protein HKO16_04950 PF00633 Helix-hairpin-helix motif HKO16_04955 PF04060 Putative Fe-S cluster HKO16_04960 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HKO16_04960 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HKO16_04970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HKO16_04975 PF02590 Predicted SPOUT methyltransferase HKO16_04980 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_04980 PF05362 Lon protease (S16) C-terminal proteolytic domain HKO16_04980 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKO16_04985 PF13018 Extended Signal Peptide of Type V secretion system HKO16_04985 PF03895 YadA-like membrane anchor domain HKO16_04985 PF05658 Head domain of trimeric autotransporter adhesin HKO16_04985 PF05662 Coiled stalk of trimeric autotransporter adhesin HKO16_04990 PF01389 OmpA-like transmembrane domain HKO16_04990 PF00691 OmpA family HKO16_04995 PF01812 5-formyltetrahydrofolate cyclo-ligase family HKO16_05035 PF00557 Metallopeptidase family M24 HKO16_05035 PF05195 Aminopeptidase P, N-terminal domain HKO16_05040 PF01494 FAD binding domain HKO16_05045 PF01494 FAD binding domain HKO16_05055 PF13411 MerR HTH family regulatory protein HKO16_05065 PF01810 LysE type translocator HKO16_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_05070 PF03466 LysR substrate binding domain HKO16_05080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKO16_05085 PF02021 Uncharacterised protein family UPF0102 HKO16_05090 PF04972 BON domain HKO16_05100 PF09297 NADH pyrophosphatase zinc ribbon domain HKO16_05100 PF00293 NUDIX domain HKO16_05110 PF00929 Exonuclease HKO16_05115 PF01476 LysM domain HKO16_05115 PF01464 Transglycosylase SLT domain HKO16_05115 PF01476 LysM domain HKO16_05115 PF01464 Transglycosylase SLT domain HKO16_05120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKO16_05125 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_05130 PF12911 N-terminal TM domain of oligopeptide transport permease C HKO16_05130 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_05135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKO16_05135 PF00005 ABC transporter HKO16_05140 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_05140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_05145 PF07715 TonB-dependent Receptor Plug Domain HKO16_05145 PF00593 TonB dependent receptor HKO16_05155 PF00929 Exonuclease HKO16_05160 PF01979 Amidohydrolase family HKO16_05165 PF00990 Diguanylate cyclase, GGDEF domain HKO16_05165 PF01590 GAF domain HKO16_05165 PF00360 Phytochrome region HKO16_05165 PF00563 EAL domain HKO16_05170 PF00764 Arginosuccinate synthase HKO16_05180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_05215 PF01042 Endoribonuclease L-PSP HKO16_05220 PF01266 FAD dependent oxidoreductase HKO16_05225 PF03466 LysR substrate binding domain HKO16_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_05240 PF01494 FAD binding domain HKO16_05245 PF03180 NLPA lipoprotein HKO16_05270 PF00324 Amino acid permease HKO16_05275 PF01266 FAD dependent oxidoreductase HKO16_05280 PF00324 Amino acid permease HKO16_05290 PF07729 FCD domain HKO16_05290 PF00392 Bacterial regulatory proteins, gntR family HKO16_05300 PF00171 Aldehyde dehydrogenase family HKO16_05310 PF00202 Aminotransferase class-III HKO16_05315 PF04958 Arginine N-succinyltransferase beta subunit HKO16_05320 PF00324 Amino acid permease HKO16_05340 PF00171 Aldehyde dehydrogenase family HKO16_05345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKO16_05345 PF12833 Helix-turn-helix domain HKO16_05350 PF00892 EamA-like transporter family HKO16_05355 PF08666 SAF domain HKO16_05355 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HKO16_05360 PF07690 Major Facilitator Superfamily HKO16_05365 PF13378 Enolase C-terminal domain-like HKO16_05370 PF00701 Dihydrodipicolinate synthetase family HKO16_05375 PF00171 Aldehyde dehydrogenase family HKO16_05380 PF00392 Bacterial regulatory proteins, gntR family HKO16_05380 PF07729 FCD domain HKO16_05385 PF07519 Tannase and feruloyl esterase HKO16_05400 PF03573 outer membrane porin, OprD family HKO16_05405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_05405 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_05405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_05415 PF00171 Aldehyde dehydrogenase family HKO16_05420 PF00378 Enoyl-CoA hydratase/isomerase HKO16_05425 PF07690 Major Facilitator Superfamily HKO16_05440 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_05440 PF00175 Oxidoreductase NAD-binding domain HKO16_05445 PF00355 Rieske [2Fe-2S] domain HKO16_05450 PF07690 Major Facilitator Superfamily HKO16_05455 PF03573 outer membrane porin, OprD family HKO16_05460 PF05199 GMC oxidoreductase HKO16_05465 PF07859 alpha/beta hydrolase fold HKO16_05470 PF00106 short chain dehydrogenase HKO16_05475 PF00743 Flavin-binding monooxygenase-like HKO16_05480 PF12833 Helix-turn-helix domain HKO16_05480 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKO16_05485 PF04072 Leucine carboxyl methyltransferase HKO16_05490 PF00743 Flavin-binding monooxygenase-like HKO16_05495 PF00106 short chain dehydrogenase HKO16_05505 PF00440 Bacterial regulatory proteins, tetR family HKO16_05505 PF17932 Tetracyclin repressor-like, C-terminal domain HKO16_05510 PF17954 Quercetinase C-terminal cupin domain HKO16_05510 PF02678 Pirin HKO16_05520 PF00106 short chain dehydrogenase HKO16_05525 PF00743 Flavin-binding monooxygenase-like HKO16_05535 PF00860 Permease family HKO16_05540 PF00962 Adenosine/AMP deaminase HKO16_05545 PF01292 Prokaryotic cytochrome b561 HKO16_05555 PF01351 Ribonuclease HII HKO16_05560 PF02599 Global regulator protein family HKO16_05565 PF13840 ACT domain HKO16_05565 PF01842 ACT domain HKO16_05565 PF00696 Amino acid kinase family HKO16_05615 PF01726 LexA DNA binding domain HKO16_05615 PF00717 Peptidase S24-like HKO16_05620 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HKO16_05635 PF00145 C-5 cytosine-specific DNA methylase HKO16_05705 PF06381 Protein of unknown function (DUF1073) HKO16_05725 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) HKO16_05840 PF11799 impB/mucB/samB family C-terminal domain HKO16_05840 PF00817 impB/mucB/samB family HKO16_05840 PF13438 Domain of unknown function (DUF4113) HKO16_05845 PF00717 Peptidase S24-like HKO16_05860 PF00589 Phage integrase family HKO16_05860 PF13356 Arm DNA-binding domain HKO16_05865 PF02272 DHHA1 domain HKO16_05865 PF01411 tRNA synthetases class II (A) HKO16_05865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKO16_05870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKO16_05870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKO16_05875 PF13393 Histidyl-tRNA synthetase HKO16_05880 PF00709 Adenylosuccinate synthetase HKO16_05895 PF00248 Aldo/keto reductase family HKO16_05900 PF00027 Cyclic nucleotide-binding domain HKO16_05900 PF13545 Crp-like helix-turn-helix domain HKO16_05905 PF02566 OsmC-like protein HKO16_05920 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_05920 PF07724 AAA domain (Cdc48 subfamily) HKO16_05920 PF17871 AAA lid domain HKO16_05920 PF02861 Clp amino terminal domain, pathogenicity island component HKO16_05920 PF10431 C-terminal, D2-small domain, of ClpB protein HKO16_05935 PF10672 S-adenosylmethionine-dependent methyltransferase HKO16_05935 PF02926 THUMP domain HKO16_05935 PF01170 Putative RNA methylase family UPF0020 HKO16_05945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKO16_05945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKO16_05950 PF01979 Amidohydrolase family HKO16_05955 PF00691 OmpA family HKO16_05955 PF13488 Glycine zipper HKO16_05965 PF13417 Glutathione S-transferase, N-terminal domain HKO16_05965 PF00043 Glutathione S-transferase, C-terminal domain HKO16_05970 PF02390 Putative methyltransferase HKO16_05980 PF02798 Glutathione S-transferase, N-terminal domain HKO16_05980 PF00043 Glutathione S-transferase, C-terminal domain HKO16_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_05990 PF13192 Thioredoxin domain HKO16_06010 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKO16_06010 PF00578 AhpC/TSA family HKO16_06015 PF00270 DEAD/DEAH box helicase HKO16_06015 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HKO16_06015 PF11898 Domain of unknown function (DUF3418) HKO16_06015 PF04408 Helicase associated domain (HA2) HKO16_06015 PF00271 Helicase conserved C-terminal domain HKO16_06020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKO16_06020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKO16_06030 PF07690 Major Facilitator Superfamily HKO16_06035 PF03594 Benzoate membrane transport protein HKO16_06040 PF00106 short chain dehydrogenase HKO16_06045 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_06045 PF00175 Oxidoreductase NAD-binding domain HKO16_06045 PF00970 Oxidoreductase FAD-binding domain HKO16_06050 PF00866 Ring hydroxylating beta subunit HKO16_06055 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKO16_06055 PF00355 Rieske [2Fe-2S] domain HKO16_06060 PF03466 LysR substrate binding domain HKO16_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_06070 PF00403 Heavy-metal-associated domain HKO16_06075 PF09278 MerR, DNA binding HKO16_06075 PF00376 MerR family regulatory protein HKO16_06110 PF02601 Exonuclease VII, large subunit HKO16_06110 PF13742 OB-fold nucleic acid binding domain HKO16_06145 PF01810 LysE type translocator HKO16_06150 PF00313 'Cold-shock' DNA-binding domain HKO16_06160 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKO16_06160 PF03807 NADP oxidoreductase coenzyme F420-dependent HKO16_06185 PF07690 Major Facilitator Superfamily HKO16_06190 PF01638 HxlR-like helix-turn-helix HKO16_06220 PF09190 DALR domain HKO16_06220 PF01406 tRNA synthetases class I (C) catalytic domain HKO16_06225 PF01380 SIS domain HKO16_06225 PF00571 CBS domain HKO16_06240 PF03968 OstA-like protein HKO16_06245 PF00005 ABC transporter HKO16_06245 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKO16_06255 PF02321 Outer membrane efflux protein HKO16_06260 PF00005 ABC transporter HKO16_06260 PF03412 Peptidase C39 family HKO16_06260 PF00664 ABC transporter transmembrane region HKO16_06270 PF01205 Uncharacterized protein family UPF0029 HKO16_06275 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_06285 PF01596 O-methyltransferase HKO16_06295 PF00037 4Fe-4S binding domain HKO16_06295 PF11953 Domain of unknown function (DUF3470) HKO16_06305 PF05188 MutS domain II HKO16_06305 PF00488 MutS domain V HKO16_06305 PF01624 MutS domain I HKO16_06305 PF05190 MutS family domain IV HKO16_06305 PF05192 MutS domain III HKO16_06310 PF01037 Lrp/AsnC ligand binding domain HKO16_06315 PF00892 EamA-like transporter family HKO16_06320 PF03707 Bacterial signalling protein N terminal repeat HKO16_06320 PF00563 EAL domain HKO16_06320 PF00990 Diguanylate cyclase, GGDEF domain HKO16_06325 PF03279 Bacterial lipid A biosynthesis acyltransferase HKO16_06330 PF01544 CorA-like Mg2+ transporter protein HKO16_06345 PF07690 Major Facilitator Superfamily HKO16_06365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKO16_06365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKO16_06385 PF13419 Haloacid dehalogenase-like hydrolase HKO16_06400 PF03466 LysR substrate binding domain HKO16_06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_06405 PF01566 Natural resistance-associated macrophage protein HKO16_06410 PF03746 LamB/YcsF family HKO16_06415 PF07286 Protein of unknown function (DUF1445) HKO16_06425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_06425 PF00289 Biotin carboxylase, N-terminal domain HKO16_06425 PF00364 Biotin-requiring enzyme HKO16_06425 PF02785 Biotin carboxylase C-terminal domain HKO16_06430 PF00654 Voltage gated chloride channel HKO16_06435 PF00226 DnaJ domain HKO16_06435 PF01556 DnaJ C terminal domain HKO16_06435 PF00684 DnaJ central domain HKO16_06440 PF00440 Bacterial regulatory proteins, tetR family HKO16_06450 PF13823 Alcohol dehydrogenase GroES-associated HKO16_06450 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_06450 PF00107 Zinc-binding dehydrogenase HKO16_06465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_06465 PF00289 Biotin carboxylase, N-terminal domain HKO16_06465 PF02785 Biotin carboxylase C-terminal domain HKO16_06470 PF02525 Flavodoxin-like fold HKO16_06475 PF01638 HxlR-like helix-turn-helix HKO16_06490 PF01402 Ribbon-helix-helix protein, copG family HKO16_06490 PF08753 NikR C terminal nickel binding domain HKO16_06495 PF01425 Amidase HKO16_06500 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKO16_06505 PF00005 ABC transporter HKO16_06530 PF03781 Sulfatase-modifying factor enzyme 1 HKO16_06585 PF01389 OmpA-like transmembrane domain HKO16_06585 PF00691 OmpA family HKO16_06595 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_06595 PF07724 AAA domain (Cdc48 subfamily) HKO16_06595 PF17871 AAA lid domain HKO16_06595 PF10431 C-terminal, D2-small domain, of ClpB protein HKO16_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_06625 PF03466 LysR substrate binding domain HKO16_06635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKO16_06640 PF07690 Major Facilitator Superfamily HKO16_06655 PF02677 Epoxyqueuosine reductase QueH HKO16_06665 PF00376 MerR family regulatory protein HKO16_06665 PF09278 MerR, DNA binding HKO16_06675 PF00701 Dihydrodipicolinate synthetase family HKO16_06685 PF00392 Bacterial regulatory proteins, gntR family HKO16_06690 PF05544 Proline racemase HKO16_06695 PF01266 FAD dependent oxidoreductase HKO16_06705 PF04324 BFD-like [2Fe-2S] binding domain HKO16_06705 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_06715 PF00083 Sugar (and other) transporter HKO16_06720 PF00171 Aldehyde dehydrogenase family HKO16_06725 PF13520 Amino acid permease HKO16_06730 PF03315 Serine dehydratase beta chain HKO16_06730 PF03313 Serine dehydratase alpha chain HKO16_06735 PF00171 Aldehyde dehydrogenase family HKO16_06735 PF01575 MaoC like domain HKO16_06740 PF05138 Phenylacetic acid catabolic protein HKO16_06745 PF06243 Phenylacetic acid degradation B HKO16_06750 PF05138 Phenylacetic acid catabolic protein HKO16_06755 PF01883 Iron-sulfur cluster assembly protein HKO16_06760 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_06760 PF00175 Oxidoreductase NAD-binding domain HKO16_06760 PF00970 Oxidoreductase FAD-binding domain HKO16_06765 PF00378 Enoyl-CoA hydratase/isomerase HKO16_06770 PF00378 Enoyl-CoA hydratase/isomerase HKO16_06775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKO16_06775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKO16_06775 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HKO16_06780 PF00108 Thiolase, N-terminal domain HKO16_06780 PF02803 Thiolase, C-terminal domain HKO16_06785 PF14535 AMP-binding enzyme C-terminal domain HKO16_06785 PF00501 AMP-binding enzyme HKO16_06790 PF07848 PaaX-like protein HKO16_06790 PF08223 PaaX-like protein C-terminal domain HKO16_06795 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_06800 PF03061 Thioesterase superfamily HKO16_06830 PF00199 Catalase HKO16_06835 PF01292 Prokaryotic cytochrome b561 HKO16_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_06840 PF03466 LysR substrate binding domain HKO16_06845 PF02525 Flavodoxin-like fold HKO16_06850 PF01614 Bacterial transcriptional regulator HKO16_06850 PF09339 IclR helix-turn-helix domain HKO16_06855 PF01494 FAD binding domain HKO16_06860 PF01168 Alanine racemase, N-terminal domain HKO16_06860 PF00842 Alanine racemase, C-terminal domain HKO16_06865 PF07702 UTRA domain HKO16_06865 PF00392 Bacterial regulatory proteins, gntR family HKO16_06875 PF00005 ABC transporter HKO16_06875 PF08402 TOBE domain HKO16_06880 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_06885 PF01266 FAD dependent oxidoreductase HKO16_06890 PF00266 Aminotransferase class-V HKO16_06895 PF13419 Haloacid dehalogenase-like hydrolase HKO16_06900 PF01810 LysE type translocator HKO16_06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_06915 PF03466 LysR substrate binding domain HKO16_06920 PF00682 HMGL-like HKO16_06925 PF02785 Biotin carboxylase C-terminal domain HKO16_06925 PF18140 Propionyl-coenzyme A carboxylase BT domain HKO16_06925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_06925 PF00364 Biotin-requiring enzyme HKO16_06925 PF00289 Biotin carboxylase, N-terminal domain HKO16_06930 PF00378 Enoyl-CoA hydratase/isomerase HKO16_06935 PF01039 Carboxyl transferase domain HKO16_06940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_06940 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_06940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_06945 PF00440 Bacterial regulatory proteins, tetR family HKO16_06950 PF13193 AMP-binding enzyme C-terminal domain HKO16_06950 PF00501 AMP-binding enzyme HKO16_06970 PF03466 LysR substrate binding domain HKO16_06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07005 PF00994 Probable molybdopterin binding domain HKO16_07005 PF18146 Damage-inducible protein CinA KH domain HKO16_07005 PF02464 Competence-damaged protein HKO16_07015 PF06628 Catalase-related immune-responsive HKO16_07015 PF18011 C-terminal domain found in long catalases HKO16_07015 PF00199 Catalase HKO16_07040 PF00717 Peptidase S24-like HKO16_07050 PF01037 Lrp/AsnC ligand binding domain HKO16_07050 PF13404 AsnC-type helix-turn-helix domain HKO16_07060 PF00072 Response regulator receiver domain HKO16_07060 PF09308 LuxQ, periplasmic HKO16_07060 PF00512 His Kinase A (phospho-acceptor) domain HKO16_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_07065 PF00072 Response regulator receiver domain HKO16_07080 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07085 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07090 PF00005 ABC transporter HKO16_07095 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKO16_07100 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKO16_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07110 PF03466 LysR substrate binding domain HKO16_07115 PF01810 LysE type translocator HKO16_07125 PF00266 Aminotransferase class-V HKO16_07135 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_07140 PF00581 Rhodanese-like domain HKO16_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07150 PF03466 LysR substrate binding domain HKO16_07155 PF02798 Glutathione S-transferase, N-terminal domain HKO16_07160 PF02798 Glutathione S-transferase, N-terminal domain HKO16_07160 PF14834 Glutathione S-transferase, C-terminal domain HKO16_07165 PF03466 LysR substrate binding domain HKO16_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07170 PF03788 LrgA family HKO16_07175 PF04172 LrgB-like family HKO16_07180 PF00392 Bacterial regulatory proteins, gntR family HKO16_07195 PF07690 Major Facilitator Superfamily HKO16_07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07205 PF03466 LysR substrate binding domain HKO16_07210 PF16957 Malonate decarboxylase, alpha subunit, transporter HKO16_07215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HKO16_07220 PF06857 Malonate decarboxylase delta subunit (MdcD) HKO16_07225 PF01039 Carboxyl transferase domain HKO16_07235 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HKO16_07240 PF00698 Acyl transferase domain HKO16_07255 PF03466 LysR substrate binding domain HKO16_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07260 PF00155 Aminotransferase class I and II HKO16_07260 PF00392 Bacterial regulatory proteins, gntR family HKO16_07270 PF02322 Cytochrome bd terminal oxidase subunit II HKO16_07275 PF01654 Cytochrome bd terminal oxidase subunit I HKO16_07290 PF00296 Luciferase-like monooxygenase HKO16_07295 PF00083 Sugar (and other) transporter HKO16_07305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKO16_07310 PF00005 ABC transporter HKO16_07315 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKO16_07325 PF01177 Asp/Glu/Hydantoin racemase HKO16_07330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKO16_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07340 PF03466 LysR substrate binding domain HKO16_07350 PF13382 Adenine deaminase C-terminal domain HKO16_07350 PF01979 Amidohydrolase family HKO16_07360 PF03960 ArsC family HKO16_07365 PF01022 Bacterial regulatory protein, arsR family HKO16_07370 PF01758 Sodium Bile acid symporter family HKO16_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07375 PF03466 LysR substrate binding domain HKO16_07390 PF13192 Thioredoxin domain HKO16_07390 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_07405 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_07410 PF00588 SpoU rRNA Methylase family HKO16_07415 PF14579 Helix-hairpin-helix motif HKO16_07415 PF01336 OB-fold nucleic acid binding domain HKO16_07415 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKO16_07415 PF02811 PHP domain HKO16_07415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKO16_07420 PF00710 Asparaginase, N-terminal HKO16_07420 PF17763 Glutaminase/Asparaginase C-terminal domain HKO16_07425 PF00375 Sodium:dicarboxylate symporter family HKO16_07430 PF00155 Aminotransferase class I and II HKO16_07435 PF01641 SelR domain HKO16_07440 PF00255 Glutathione peroxidase HKO16_07445 PF12852 Cupin HKO16_07445 PF12833 Helix-turn-helix domain HKO16_07455 PF00155 Aminotransferase class I and II HKO16_07460 PF01909 Nucleotidyltransferase domain HKO16_07460 PF08335 GlnD PII-uridylyltransferase HKO16_07460 PF01966 HD domain HKO16_07465 PF02222 ATP-grasp domain HKO16_07475 PF05437 Branched-chain amino acid transport protein (AzlD) HKO16_07480 PF03591 AzlC protein HKO16_07505 PF06071 Protein of unknown function (DUF933) HKO16_07505 PF01926 50S ribosome-binding GTPase HKO16_07510 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07515 PF09383 NIL domain HKO16_07515 PF00005 ABC transporter HKO16_07520 PF03180 NLPA lipoprotein HKO16_07525 PF03180 NLPA lipoprotein HKO16_07530 PF00296 Luciferase-like monooxygenase HKO16_07540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKO16_07540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_07555 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07560 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_07565 PF00005 ABC transporter HKO16_07575 PF01037 Lrp/AsnC ligand binding domain HKO16_07580 PF01709 Transcriptional regulator HKO16_07590 PF00440 Bacterial regulatory proteins, tetR family HKO16_07610 PF03466 LysR substrate binding domain HKO16_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_07620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKO16_07630 PF00892 EamA-like transporter family HKO16_07650 PF13954 PapC N-terminal domain HKO16_07650 PF00577 Outer membrane usher protein HKO16_07650 PF13953 PapC C-terminal domain HKO16_07655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKO16_07655 PF02753 Pili assembly chaperone PapD, C-terminal domain HKO16_07660 PF16970 Type-1 fimbrial protein, A HKO16_07675 PF04055 Radical SAM superfamily HKO16_07675 PF06968 Biotin and Thiamin Synthesis associated domain HKO16_07680 PF08331 Domain of unknown function (DUF1730) HKO16_07685 PF03853 YjeF-related protein N-terminus HKO16_07685 PF01256 Carbohydrate kinase HKO16_07690 PF02075 Crossover junction endodeoxyribonuclease RuvC HKO16_07705 PF00905 Penicillin binding protein transpeptidase domain HKO16_07725 PF00438 S-adenosylmethionine synthetase, N-terminal domain HKO16_07725 PF02772 S-adenosylmethionine synthetase, central domain HKO16_07725 PF02773 S-adenosylmethionine synthetase, C-terminal domain HKO16_07730 PF02779 Transketolase, pyrimidine binding domain HKO16_07730 PF02780 Transketolase, C-terminal domain HKO16_07730 PF00456 Transketolase, thiamine diphosphate binding domain HKO16_07740 PF04264 YceI-like domain HKO16_07750 PF09992 Phosphodiester glycosidase HKO16_07760 PF05958 tRNA (Uracil-5-)-methyltransferase HKO16_07765 PF04229 GrpB protein HKO16_07770 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HKO16_07770 PF14850 DNA-binding domain of Proline dehydrogenase HKO16_07770 PF01619 Proline dehydrogenase HKO16_07770 PF00171 Aldehyde dehydrogenase family HKO16_07775 PF01037 Lrp/AsnC ligand binding domain HKO16_07780 PF00474 Sodium:solute symporter family HKO16_07785 PF02146 Sir2 family HKO16_07790 PF01597 Glycine cleavage H-protein HKO16_07795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKO16_07795 PF12833 Helix-turn-helix domain HKO16_07805 PF00664 ABC transporter transmembrane region HKO16_07805 PF00005 ABC transporter HKO16_07810 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HKO16_07815 PF06912 Protein of unknown function (DUF1275) HKO16_07820 PF00375 Sodium:dicarboxylate symporter family HKO16_07835 PF08007 Cupin superfamily protein HKO16_07840 PF02545 Maf-like protein HKO16_07850 PF00162 Phosphoglycerate kinase HKO16_07860 PF01116 Fructose-bisphosphate aldolase class-II HKO16_07865 PF00639 PPIC-type PPIASE domain HKO16_07865 PF09312 SurA N-terminal domain HKO16_07870 PF04453 LPS transport system D HKO16_07870 PF03968 OstA-like protein HKO16_07875 PF01636 Phosphotransferase enzyme family HKO16_07880 PF00483 Nucleotidyl transferase HKO16_07885 PF02527 rRNA small subunit methyltransferase G HKO16_07890 PF13614 AAA domain HKO16_07895 PF17762 HTH domain found in ParB protein HKO16_07895 PF02195 ParB-like nuclease domain HKO16_07900 PF01618 MotA/TolQ/ExbB proton channel family HKO16_07910 PF00005 ABC transporter HKO16_07910 PF00664 ABC transporter transmembrane region HKO16_07915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HKO16_07920 PF02348 Cytidylyltransferase HKO16_07925 PF09115 DNA polymerase III, delta subunit, C terminal HKO16_07935 PF01026 TatD related DNase HKO16_07950 PF02501 Type II secretion system (T2SS), protein I HKO16_07950 PF07963 Prokaryotic N-terminal methylation motif HKO16_07955 PF07963 Prokaryotic N-terminal methylation motif HKO16_07955 PF11612 Type II secretion system (T2SS), protein J HKO16_07960 PF03934 Type II secretion system (T2SS), protein K HKO16_07970 PF03167 Uracil DNA glycosylase superfamily HKO16_07980 PF14437 MafB19-like deaminase HKO16_07990 PF02224 Cytidylate kinase HKO16_07995 PF00575 S1 RNA binding domain HKO16_08000 PF00216 Bacterial DNA-binding protein HKO16_08010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HKO16_08020 PF00743 Flavin-binding monooxygenase-like HKO16_08030 PF03969 AFG1-like ATPase HKO16_08035 PF00589 Phage integrase family HKO16_08035 PF02899 Phage integrase, N-terminal SAM-like domain HKO16_08100 PF00772 DnaB-like helicase N terminal domain HKO16_08100 PF03796 DnaB-like helicase C terminal domain HKO16_08190 PF04860 Phage portal protein HKO16_08300 PF01274 Malate synthase HKO16_08310 PF02472 Biopolymer transport protein ExbD/TolR HKO16_08315 PF02472 Biopolymer transport protein ExbD/TolR HKO16_08320 PF01618 MotA/TolQ/ExbB proton channel family HKO16_08330 PF00593 TonB dependent receptor HKO16_08330 PF07715 TonB-dependent Receptor Plug Domain HKO16_08350 PF01432 Peptidase family M3 HKO16_08355 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_08360 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_08365 PF00005 ABC transporter HKO16_08365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKO16_08380 PF00459 Inositol monophosphatase family HKO16_08390 PF01649 Ribosomal protein S20 HKO16_08395 PF13460 NAD(P)H-binding HKO16_08400 PF03737 Aldolase/RraA HKO16_08420 PF03461 TRCF domain HKO16_08420 PF02559 CarD-like/TRCF domain HKO16_08420 PF00270 DEAD/DEAH box helicase HKO16_08420 PF00271 Helicase conserved C-terminal domain HKO16_08420 PF17757 UvrB interaction domain HKO16_08430 PF00211 Adenylate and Guanylate cyclase catalytic domain HKO16_08435 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_08440 PF00012 Hsp70 protein HKO16_08445 PF07743 HSCB C-terminal oligomerisation domain HKO16_08445 PF00226 DnaJ domain HKO16_08450 PF01521 Iron-sulphur cluster biosynthesis HKO16_08455 PF01592 NifU-like N terminal domain HKO16_08460 PF00266 Aminotransferase class-V HKO16_08465 PF02082 Transcriptional regulator HKO16_08480 PF00216 Bacterial DNA-binding protein HKO16_08490 PF12852 Cupin HKO16_08490 PF12833 Helix-turn-helix domain HKO16_08495 PF00487 Fatty acid desaturase HKO16_08500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_08500 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_08500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_08505 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_08505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_08505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_08510 PF03109 ABC1 family HKO16_08520 PF04073 Aminoacyl-tRNA editing domain HKO16_08525 PF06276 Ferric iron reductase FhuF-like transporter HKO16_08525 PF04183 IucA / IucC family HKO16_08530 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HKO16_08535 PF07690 Major Facilitator Superfamily HKO16_08540 PF04183 IucA / IucC family HKO16_08540 PF06276 Ferric iron reductase FhuF-like transporter HKO16_08545 PF06276 Ferric iron reductase FhuF-like transporter HKO16_08545 PF04183 IucA / IucC family HKO16_08555 PF03737 Aldolase/RraA HKO16_08560 PF07715 TonB-dependent Receptor Plug Domain HKO16_08560 PF00593 TonB dependent receptor HKO16_08595 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HKO16_08600 PF02277 Phosphoribosyltransferase HKO16_08605 PF00300 Histidine phosphatase superfamily (branch 1) HKO16_08615 PF02654 Cobalamin-5-phosphate synthase HKO16_08620 PF00793 DAHP synthetase I family HKO16_08625 PF01925 Sulfite exporter TauE/SafE HKO16_08645 PF00593 TonB dependent receptor HKO16_08645 PF07715 TonB-dependent Receptor Plug Domain HKO16_08650 PF02684 Lipid-A-disaccharide synthetase HKO16_08660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_08665 PF00005 ABC transporter HKO16_08700 PF01230 HIT domain HKO16_08730 PF08241 Methyltransferase domain HKO16_08735 PF00561 alpha/beta hydrolase fold HKO16_08740 PF01053 Cys/Met metabolism PLP-dependent enzyme HKO16_08750 PF02575 YbaB/EbfC DNA-binding family HKO16_08755 PF13662 Toprim domain HKO16_08755 PF02132 RecR protein HKO16_08760 PF00570 HRDC domain HKO16_08760 PF01612 3'-5' exonuclease HKO16_08780 PF05166 YcgL domain HKO16_08790 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_08790 PF17862 AAA+ lid domain HKO16_08790 PF01434 Peptidase family M41 HKO16_08800 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_08805 PF05175 Methyltransferase small domain HKO16_08810 PF01264 Chorismate synthase HKO16_08815 PF00990 Diguanylate cyclase, GGDEF domain HKO16_08815 PF08448 PAS fold HKO16_08830 PF04055 Radical SAM superfamily HKO16_08835 PF00676 Dehydrogenase E1 component HKO16_08840 PF02779 Transketolase, pyrimidine binding domain HKO16_08840 PF02780 Transketolase, C-terminal domain HKO16_08845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKO16_08845 PF00364 Biotin-requiring enzyme HKO16_08845 PF02817 e3 binding domain HKO16_08850 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_08850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKO16_08855 PF00106 short chain dehydrogenase HKO16_08860 PF00107 Zinc-binding dehydrogenase HKO16_08860 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_08865 PF01062 Bestrophin, RFP-TM, chloride channel HKO16_08870 PF00072 Response regulator receiver domain HKO16_08870 PF02954 Bacterial regulatory protein, Fis family HKO16_08870 PF00158 Sigma-54 interaction domain HKO16_08875 PF04273 Putative phosphatase (DUF442) HKO16_08875 PF00753 Metallo-beta-lactamase superfamily HKO16_08880 PF00753 Metallo-beta-lactamase superfamily HKO16_08880 PF04273 Putative phosphatase (DUF442) HKO16_08885 PF01925 Sulfite exporter TauE/SafE HKO16_08900 PF06445 GyrI-like small molecule binding domain HKO16_08900 PF12833 Helix-turn-helix domain HKO16_08905 PF01638 HxlR-like helix-turn-helix HKO16_08910 PF02525 Flavodoxin-like fold HKO16_08915 PF02417 Chromate transporter HKO16_08920 PF00392 Bacterial regulatory proteins, gntR family HKO16_08920 PF07702 UTRA domain HKO16_08935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKO16_08940 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_08945 PF00005 ABC transporter HKO16_08960 PF00083 Sugar (and other) transporter HKO16_08965 PF00593 TonB dependent receptor HKO16_08965 PF07715 TonB-dependent Receptor Plug Domain HKO16_08970 PF00206 Lyase HKO16_08970 PF10415 Fumarase C C-terminus HKO16_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_08985 PF03466 LysR substrate binding domain HKO16_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_08990 PF03466 LysR substrate binding domain HKO16_08995 PF02803 Thiolase, C-terminal domain HKO16_08995 PF00108 Thiolase, N-terminal domain HKO16_09000 PF02667 Short chain fatty acid transporter HKO16_09005 PF01144 Coenzyme A transferase HKO16_09010 PF01144 Coenzyme A transferase HKO16_09015 PF03466 LysR substrate binding domain HKO16_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09035 PF00440 Bacterial regulatory proteins, tetR family HKO16_09055 PF12833 Helix-turn-helix domain HKO16_09055 PF06719 AraC-type transcriptional regulator N-terminus HKO16_09060 PF07690 Major Facilitator Superfamily HKO16_09065 PF01738 Dienelactone hydrolase family HKO16_09080 PF01613 Flavin reductase like domain HKO16_09090 PF12833 Helix-turn-helix domain HKO16_09090 PF14525 AraC-binding-like domain HKO16_09110 PF17755 UvrA DNA-binding domain HKO16_09110 PF17760 UvrA interaction domain HKO16_09110 PF00005 ABC transporter HKO16_09115 PF00873 AcrB/AcrD/AcrF family HKO16_09120 PF00529 HlyD membrane-fusion protein of T1SS HKO16_09120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_09125 PF00486 Transcriptional regulatory protein, C terminal HKO16_09125 PF00072 Response regulator receiver domain HKO16_09130 PF00512 His Kinase A (phospho-acceptor) domain HKO16_09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_09130 PF00672 HAMP domain HKO16_09130 PF16527 Two-component sensor protein CpxA, periplasmic domain HKO16_09145 PF12833 Helix-turn-helix domain HKO16_09145 PF02311 AraC-like ligand binding domain HKO16_09150 PF12146 Serine aminopeptidase, S33 HKO16_09160 PF00106 short chain dehydrogenase HKO16_09185 PF13673 Acetyltransferase (GNAT) domain HKO16_09195 PF06114 IrrE N-terminal-like domain HKO16_09220 PF02824 TGS domain HKO16_09220 PF04607 Region found in RelA / SpoT proteins HKO16_09220 PF13291 ACT domain HKO16_09230 PF01975 Survival protein SurE HKO16_09255 PF07690 Major Facilitator Superfamily HKO16_09265 PF01425 Amidase HKO16_09270 PF03472 Autoinducer binding domain HKO16_09270 PF00196 Bacterial regulatory proteins, luxR family HKO16_09300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKO16_09305 PF14572 Phosphoribosyl synthetase-associated domain HKO16_09305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKO16_09325 PF00005 ABC transporter HKO16_09340 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_09340 PF00107 Zinc-binding dehydrogenase HKO16_09345 PF12833 Helix-turn-helix domain HKO16_09345 PF06719 AraC-type transcriptional regulator N-terminus HKO16_09350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKO16_09350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKO16_09355 PF07690 Major Facilitator Superfamily HKO16_09360 PF01370 NAD dependent epimerase/dehydratase family HKO16_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09365 PF03466 LysR substrate binding domain HKO16_09375 PF00920 Dehydratase family HKO16_09380 PF00171 Aldehyde dehydrogenase family HKO16_09395 PF00529 HlyD membrane-fusion protein of T1SS HKO16_09395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_09410 PF03466 LysR substrate binding domain HKO16_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09420 PF08450 SMP-30/Gluconolactonase/LRE-like region HKO16_09425 PF00392 Bacterial regulatory proteins, gntR family HKO16_09425 PF07702 UTRA domain HKO16_09435 PF04909 Amidohydrolase HKO16_09440 PF07690 Major Facilitator Superfamily HKO16_09445 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) HKO16_09500 PF13193 AMP-binding enzyme C-terminal domain HKO16_09500 PF00501 AMP-binding enzyme HKO16_09510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_09510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_09510 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKO16_09510 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_09515 PF01575 MaoC like domain HKO16_09520 PF00106 short chain dehydrogenase HKO16_09535 PF03466 LysR substrate binding domain HKO16_09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09540 PF00440 Bacterial regulatory proteins, tetR family HKO16_09540 PF08359 YsiA-like protein, C-terminal region HKO16_09545 PF12706 Beta-lactamase superfamily domain HKO16_09555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_09565 PF13411 MerR HTH family regulatory protein HKO16_09575 PF01872 RibD C-terminal domain HKO16_09580 PF00106 short chain dehydrogenase HKO16_09585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_09590 PF00561 alpha/beta hydrolase fold HKO16_09600 PF00171 Aldehyde dehydrogenase family HKO16_09610 PF07690 Major Facilitator Superfamily HKO16_09615 PF00920 Dehydratase family HKO16_09620 PF07729 FCD domain HKO16_09620 PF00392 Bacterial regulatory proteins, gntR family HKO16_09630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09630 PF03466 LysR substrate binding domain HKO16_09635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKO16_09635 PF13378 Enolase C-terminal domain-like HKO16_09640 PF02426 Muconolactone delta-isomerase HKO16_09645 PF00775 Dioxygenase HKO16_09645 PF04444 Catechol dioxygenase N terminus HKO16_09650 PF01144 Coenzyme A transferase HKO16_09655 PF01144 Coenzyme A transferase HKO16_09660 PF00108 Thiolase, N-terminal domain HKO16_09660 PF02803 Thiolase, C-terminal domain HKO16_09665 PF12146 Serine aminopeptidase, S33 HKO16_09670 PF01804 Penicillin amidase HKO16_09675 PF00171 Aldehyde dehydrogenase family HKO16_09685 PF01179 Copper amine oxidase, enzyme domain HKO16_09685 PF07833 Copper amine oxidase N-terminal domain HKO16_09685 PF02728 Copper amine oxidase, N3 domain HKO16_09685 PF02727 Copper amine oxidase, N2 domain HKO16_09690 PF12833 Helix-turn-helix domain HKO16_09690 PF02311 AraC-like ligand binding domain HKO16_09695 PF01613 Flavin reductase like domain HKO16_09700 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_09700 PF00175 Oxidoreductase NAD-binding domain HKO16_09715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKO16_09715 PF00355 Rieske [2Fe-2S] domain HKO16_09730 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKO16_09735 PF01425 Amidase HKO16_09745 PF07690 Major Facilitator Superfamily HKO16_09755 PF00106 short chain dehydrogenase HKO16_09770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_09770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_09770 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_09775 PF03466 LysR substrate binding domain HKO16_09780 PF09339 IclR helix-turn-helix domain HKO16_09780 PF01614 Bacterial transcriptional regulator HKO16_09785 PF00753 Metallo-beta-lactamase superfamily HKO16_09795 PF04143 Sulphur transport HKO16_09805 PF01011 PQQ enzyme repeat HKO16_09805 PF13360 PQQ-like domain HKO16_09810 PF04966 Carbohydrate-selective porin, OprB family HKO16_09815 PF05048 Periplasmic copper-binding protein (NosD) HKO16_09820 PF01487 Type I 3-dehydroquinase HKO16_09825 PF00775 Dioxygenase HKO16_09830 PF00775 Dioxygenase HKO16_09830 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HKO16_09835 PF02627 Carboxymuconolactone decarboxylase family HKO16_09840 PF07690 Major Facilitator Superfamily HKO16_09845 PF00561 alpha/beta hydrolase fold HKO16_09850 PF10397 Adenylosuccinate lyase C-terminus HKO16_09850 PF00206 Lyase HKO16_09855 PF02803 Thiolase, C-terminal domain HKO16_09855 PF00108 Thiolase, N-terminal domain HKO16_09860 PF01144 Coenzyme A transferase HKO16_09865 PF01144 Coenzyme A transferase HKO16_09870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HKO16_09875 PF04977 Septum formation initiator HKO16_09880 PF04239 Protein of unknown function (DUF421) HKO16_09885 PF00113 Enolase, C-terminal TIM barrel domain HKO16_09885 PF03952 Enolase, N-terminal domain HKO16_09890 PF00793 DAHP synthetase I family HKO16_09895 PF06418 CTP synthase N-terminus HKO16_09895 PF00117 Glutamine amidotransferase class-I HKO16_09925 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_09925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_09940 PF00793 DAHP synthetase I family HKO16_09945 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HKO16_09950 PF07724 AAA domain (Cdc48 subfamily) HKO16_09950 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_09950 PF02861 Clp amino terminal domain, pathogenicity island component HKO16_09950 PF17871 AAA lid domain HKO16_09950 PF10431 C-terminal, D2-small domain, of ClpB protein HKO16_09955 PF02617 ATP-dependent Clp protease adaptor protein ClpS HKO16_09965 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKO16_09965 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKO16_09980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HKO16_09985 PF00585 C-terminal regulatory domain of Threonine dehydratase HKO16_09985 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_09990 PF02254 TrkA-N domain HKO16_09990 PF02080 TrkA-C domain HKO16_09995 PF02386 Cation transport protein HKO16_10000 PF02253 Phospholipase A1 HKO16_10005 PF00675 Insulinase (Peptidase family M16) HKO16_10005 PF05193 Peptidase M16 inactive domain HKO16_10005 PF08367 Peptidase M16C associated HKO16_10010 PF07715 TonB-dependent Receptor Plug Domain HKO16_10010 PF00593 TonB dependent receptor HKO16_10015 PF00294 pfkB family carbohydrate kinase HKO16_10025 PF07290 Protein of unknown function (DUF1449) HKO16_10035 PF01654 Cytochrome bd terminal oxidase subunit I HKO16_10040 PF02322 Cytochrome bd terminal oxidase subunit II HKO16_10045 PF08173 Membrane bound YbgT-like protein HKO16_10060 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HKO16_10070 PF00448 SRP54-type protein, GTPase domain HKO16_10070 PF02881 SRP54-type protein, helical bundle domain HKO16_10095 PF00478 IMP dehydrogenase / GMP reductase domain HKO16_10095 PF00571 CBS domain HKO16_10100 PF00202 Aminotransferase class-III HKO16_10105 PF00462 Glutaredoxin HKO16_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_10115 PF03466 LysR substrate binding domain HKO16_10120 PF00557 Metallopeptidase family M24 HKO16_10125 PF05525 Branched-chain amino acid transport protein HKO16_10150 PF00391 PEP-utilising enzyme, mobile domain HKO16_10150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKO16_10150 PF05524 PEP-utilising enzyme, N-terminal HKO16_10150 PF02896 PEP-utilising enzyme, TIM barrel domain HKO16_10150 PF00381 PTS HPr component phosphorylation site HKO16_10155 PF00294 pfkB family carbohydrate kinase HKO16_10160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HKO16_10160 PF02378 Phosphotransferase system, EIIC HKO16_10175 PF03707 Bacterial signalling protein N terminal repeat HKO16_10175 PF00990 Diguanylate cyclase, GGDEF domain HKO16_10175 PF00563 EAL domain HKO16_10185 PF07995 Glucose / Sorbosone dehydrogenase HKO16_10190 PF02586 SOS response associated peptidase (SRAP) HKO16_10195 PF00916 Sulfate permease family HKO16_10195 PF01740 STAS domain HKO16_10200 PF05922 Peptidase inhibitor I9 HKO16_10200 PF00082 Subtilase family HKO16_10210 PF00324 Amino acid permease HKO16_10215 PF00266 Aminotransferase class-V HKO16_10220 PF01037 Lrp/AsnC ligand binding domain HKO16_10245 PF13419 Haloacid dehalogenase-like hydrolase HKO16_10250 PF01479 S4 domain HKO16_10255 PF00154 recA bacterial DNA recombination protein HKO16_10260 PF02631 RecX family HKO16_10275 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HKO16_10275 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_10280 PF07977 FabA-like domain HKO16_10285 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_10285 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HKO16_10295 PF07244 Surface antigen variable number repeat HKO16_10295 PF01103 Surface antigen HKO16_10300 PF13180 PDZ domain HKO16_10300 PF17820 PDZ domain HKO16_10300 PF02163 Peptidase family M50 HKO16_10305 PF13288 DXP reductoisomerase C-terminal domain HKO16_10305 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HKO16_10305 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HKO16_10315 PF01255 Putative undecaprenyl diphosphate synthase HKO16_10320 PF01765 Ribosome recycling factor HKO16_10325 PF00696 Amino acid kinase family HKO16_10330 PF00919 Uncharacterized protein family UPF0004 HKO16_10330 PF04055 Radical SAM superfamily HKO16_10330 PF18693 TRAM domain HKO16_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_10340 PF00512 His Kinase A (phospho-acceptor) domain HKO16_10340 PF00989 PAS fold HKO16_10345 PF00072 Response regulator receiver domain HKO16_10345 PF00158 Sigma-54 interaction domain HKO16_10345 PF02954 Bacterial regulatory protein, Fis family HKO16_10350 PF00440 Bacterial regulatory proteins, tetR family HKO16_10355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKO16_10355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKO16_10365 PF02542 YgbB family HKO16_10375 PF01266 FAD dependent oxidoreductase HKO16_10395 PF00206 Lyase HKO16_10395 PF10415 Fumarase C C-terminus HKO16_10400 PF16363 GDP-mannose 4,6 dehydratase HKO16_10405 PF02635 DsrE/DsrF-like family HKO16_10425 PF00892 EamA-like transporter family HKO16_10430 PF00155 Aminotransferase class I and II HKO16_10430 PF00392 Bacterial regulatory proteins, gntR family HKO16_10435 PF01638 HxlR-like helix-turn-helix HKO16_10440 PF00994 Probable molybdopterin binding domain HKO16_10440 PF03453 MoeA N-terminal region (domain I and II) HKO16_10440 PF03454 MoeA C-terminal region (domain IV) HKO16_10445 PF01967 MoaC family HKO16_10445 PF00994 Probable molybdopterin binding domain HKO16_10450 PF02391 MoaE protein HKO16_10460 PF06463 Molybdenum Cofactor Synthesis C HKO16_10460 PF04055 Radical SAM superfamily HKO16_10465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKO16_10465 PF00384 Molybdopterin oxidoreductase HKO16_10465 PF01568 Molydopterin dinucleotide binding domain HKO16_10470 PF12804 MobA-like NTP transferase domain HKO16_10475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKO16_10475 PF00384 Molybdopterin oxidoreductase HKO16_10475 PF01568 Molydopterin dinucleotide binding domain HKO16_10475 PF04324 BFD-like [2Fe-2S] binding domain HKO16_10480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKO16_10480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKO16_10480 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_10480 PF04324 BFD-like [2Fe-2S] binding domain HKO16_10480 PF18267 Rubredoxin NAD+ reductase C-terminal domain HKO16_10485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKO16_10485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKO16_10485 PF04324 BFD-like [2Fe-2S] binding domain HKO16_10485 PF13806 Rieske-like [2Fe-2S] domain HKO16_10485 PF18267 Rubredoxin NAD+ reductase C-terminal domain HKO16_10485 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_10495 PF00486 Transcriptional regulatory protein, C terminal HKO16_10495 PF00072 Response regulator receiver domain HKO16_10500 PF00005 ABC transporter HKO16_10510 PF00817 impB/mucB/samB family HKO16_10510 PF11799 impB/mucB/samB family C-terminal domain HKO16_10510 PF13438 Domain of unknown function (DUF4113) HKO16_10515 PF01220 Dehydroquinase class II HKO16_10520 PF00364 Biotin-requiring enzyme HKO16_10525 PF00289 Biotin carboxylase, N-terminal domain HKO16_10525 PF02785 Biotin carboxylase C-terminal domain HKO16_10525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_10535 PF12832 MFS_1 like family HKO16_10550 PF00817 impB/mucB/samB family HKO16_10550 PF13438 Domain of unknown function (DUF4113) HKO16_10550 PF11799 impB/mucB/samB family C-terminal domain HKO16_10550 PF11798 IMS family HHH motif HKO16_10620 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HKO16_10765 PF02498 BRO family, N-terminal domain HKO16_10765 PF10548 P22AR C-terminal domain HKO16_10805 PF00145 C-5 cytosine-specific DNA methylase HKO16_10910 PF01645 Conserved region in glutamate synthase HKO16_10925 PF01565 FAD binding domain HKO16_10925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HKO16_10930 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKO16_10940 PF00465 Iron-containing alcohol dehydrogenase HKO16_10945 PF03061 Thioesterase superfamily HKO16_10950 PF04185 Phosphoesterase family HKO16_10950 PF05506 Domain of unknown function (DUF756) HKO16_10955 PF12169 DNA polymerase III subunits gamma and tau domain III HKO16_10955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HKO16_10955 PF12170 DNA polymerase III tau subunit V interacting with alpha HKO16_10960 PF07690 Major Facilitator Superfamily HKO16_10975 PF01575 MaoC like domain HKO16_10985 PF02803 Thiolase, C-terminal domain HKO16_10985 PF00108 Thiolase, N-terminal domain HKO16_10995 PF03466 LysR substrate binding domain HKO16_10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_11000 PF00923 Transaldolase/Fructose-6-phosphate aldolase HKO16_11005 PF01810 LysE type translocator HKO16_11010 PF01037 Lrp/AsnC ligand binding domain HKO16_11015 PF03594 Benzoate membrane transport protein HKO16_11020 PF02308 MgtC family HKO16_11025 PF00689 Cation transporting ATPase, C-terminus HKO16_11025 PF00690 Cation transporter/ATPase, N-terminus HKO16_11050 PF00582 Universal stress protein family HKO16_11055 PF00005 ABC transporter HKO16_11055 PF12848 ABC transporter HKO16_11075 PF07715 TonB-dependent Receptor Plug Domain HKO16_11075 PF00593 TonB dependent receptor HKO16_11105 PF00924 Mechanosensitive ion channel HKO16_11110 PF00593 TonB dependent receptor HKO16_11110 PF07715 TonB-dependent Receptor Plug Domain HKO16_11115 PF00440 Bacterial regulatory proteins, tetR family HKO16_11125 PF01037 Lrp/AsnC ligand binding domain HKO16_11130 PF01817 Chorismate mutase type II HKO16_11155 PF00577 Outer membrane usher protein HKO16_11155 PF13953 PapC C-terminal domain HKO16_11155 PF13954 PapC N-terminal domain HKO16_11170 PF01433 Peptidase family M1 domain HKO16_11170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HKO16_11170 PF11940 Domain of unknown function (DUF3458) Ig-like fold HKO16_11185 PF02110 Hydroxyethylthiazole kinase family HKO16_11195 PF05970 PIF1-like helicase HKO16_11195 PF14493 Helix-turn-helix domain HKO16_11200 PF00465 Iron-containing alcohol dehydrogenase HKO16_11215 PF00171 Aldehyde dehydrogenase family HKO16_11220 PF13520 Amino acid permease HKO16_11225 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HKO16_11230 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HKO16_11235 PF00958 GMP synthase C terminal domain HKO16_11235 PF00117 Glutamine amidotransferase class-I HKO16_11235 PF02540 NAD synthase HKO16_11240 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKO16_11240 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HKO16_11245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKO16_11250 PF00149 Calcineurin-like phosphoesterase HKO16_11260 PF00881 Nitroreductase family HKO16_11270 PF17209 Hfq protein HKO16_11280 PF01119 DNA mismatch repair protein, C-terminal domain HKO16_11280 PF08676 MutL C terminal dimerisation domain HKO16_11285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HKO16_11290 PF01479 S4 domain HKO16_11290 PF00849 RNA pseudouridylate synthase HKO16_11305 PF00849 RNA pseudouridylate synthase HKO16_11305 PF01479 S4 domain HKO16_11315 PF04284 Protein of unknown function (DUF441) HKO16_11320 PF03466 LysR substrate binding domain HKO16_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_11335 PF07690 Major Facilitator Superfamily HKO16_11340 PF00520 Ion transport protein HKO16_11340 PF00027 Cyclic nucleotide-binding domain HKO16_11350 PF11791 Aconitate B N-terminal domain HKO16_11350 PF06434 Aconitate hydratase 2 N-terminus HKO16_11350 PF00330 Aconitase family (aconitate hydratase) HKO16_11365 PF01103 Surface antigen HKO16_11365 PF07244 Surface antigen variable number repeat HKO16_11365 PF17243 POTRA domain TamA domain 1 HKO16_11370 PF07690 Major Facilitator Superfamily HKO16_11375 PF03232 Ubiquinone biosynthesis protein COQ7 HKO16_11385 PF00120 Glutamine synthetase, catalytic domain HKO16_11390 PF00072 Response regulator receiver domain HKO16_11390 PF00486 Transcriptional regulatory protein, C terminal HKO16_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_11395 PF13493 Domain of unknown function (DUF4118) HKO16_11395 PF00512 His Kinase A (phospho-acceptor) domain HKO16_11395 PF02702 Osmosensitive K+ channel His kinase sensor domain HKO16_11400 PF02669 K+-transporting ATPase, c chain HKO16_11410 PF03814 Potassium-transporting ATPase A subunit HKO16_11420 PF02152 Dihydroneopterin aldolase HKO16_11425 PF03109 ABC1 family HKO16_11430 PF00899 ThiF family HKO16_11435 PF01613 Flavin reductase like domain HKO16_11440 PF13193 AMP-binding enzyme C-terminal domain HKO16_11440 PF00501 AMP-binding enzyme HKO16_11445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_11445 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_11445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_11450 PF00106 short chain dehydrogenase HKO16_11455 PF12833 Helix-turn-helix domain HKO16_11460 PF13847 Methyltransferase domain HKO16_11460 PF17827 PrmC N-terminal domain HKO16_11465 PF00472 RF-1 domain HKO16_11465 PF03462 PCRF domain HKO16_11475 PF03466 LysR substrate binding domain HKO16_11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_11490 PF00296 Luciferase-like monooxygenase HKO16_11500 PF13994 PgaD-like protein HKO16_11505 PF00535 Glycosyl transferase family 2 HKO16_11510 PF01522 Polysaccharide deacetylase HKO16_11510 PF14883 Hypothetical glycosyl hydrolase family 13 HKO16_11520 PF03618 Kinase/pyrophosphorylase HKO16_11525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HKO16_11525 PF02896 PEP-utilising enzyme, TIM barrel domain HKO16_11525 PF00391 PEP-utilising enzyme, mobile domain HKO16_11535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKO16_11535 PF06481 COX Aromatic Rich Motif HKO16_11540 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKO16_11545 PF00510 Cytochrome c oxidase subunit III HKO16_11550 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKO16_11555 PF01040 UbiA prenyltransferase family HKO16_11560 PF01250 Ribosomal protein S6 HKO16_11565 PF01084 Ribosomal protein S18 HKO16_11570 PF01281 Ribosomal protein L9, N-terminal domain HKO16_11570 PF03948 Ribosomal protein L9, C-terminal domain HKO16_11575 PF00772 DnaB-like helicase N terminal domain HKO16_11575 PF03796 DnaB-like helicase C terminal domain HKO16_11580 PF00842 Alanine racemase, C-terminal domain HKO16_11580 PF01168 Alanine racemase, N-terminal domain HKO16_11590 PF01841 Transglutaminase-like superfamily HKO16_11590 PF08379 Bacterial transglutaminase-like N-terminal region HKO16_11600 PF14403 Circularly permuted ATP-grasp type 2 HKO16_11610 PF01134 Glucose inhibited division protein A HKO16_11610 PF13932 GidA associated domain HKO16_11630 PF02954 Bacterial regulatory protein, Fis family HKO16_11635 PF02142 MGS-like domain HKO16_11635 PF01808 AICARFT/IMPCHase bienzyme HKO16_11640 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HKO16_11640 PF02843 Phosphoribosylglycinamide synthetase, C domain HKO16_11640 PF02844 Phosphoribosylglycinamide synthetase, N domain HKO16_11645 PF03180 NLPA lipoprotein HKO16_11650 PF00005 ABC transporter HKO16_11650 PF09383 NIL domain HKO16_11655 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_11660 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKO16_11660 PF00753 Metallo-beta-lactamase superfamily HKO16_11670 PF00375 Sodium:dicarboxylate symporter family HKO16_11690 PF07995 Glucose / Sorbosone dehydrogenase HKO16_11695 PF00892 EamA-like transporter family HKO16_11700 PF01177 Asp/Glu/Hydantoin racemase HKO16_11715 PF02470 MlaD protein HKO16_11720 PF04403 Paraquat-inducible protein A HKO16_11750 PF00293 NUDIX domain HKO16_11755 PF08946 Osmosensory transporter coiled coil HKO16_11755 PF00083 Sugar (and other) transporter HKO16_11805 PF07729 FCD domain HKO16_11805 PF00392 Bacterial regulatory proteins, gntR family HKO16_11815 PF03616 Sodium/glutamate symporter HKO16_11820 PF00561 alpha/beta hydrolase fold HKO16_11845 PF04076 Bacterial OB fold (BOF) protein HKO16_11875 PF00324 Amino acid permease HKO16_11880 PF00171 Aldehyde dehydrogenase family HKO16_11885 PF00202 Aminotransferase class-III HKO16_11890 PF03466 LysR substrate binding domain HKO16_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_11915 PF00069 Protein kinase domain HKO16_11915 PF03793 PASTA domain HKO16_11935 PF00814 Glycoprotease family HKO16_11940 PF01165 Ribosomal protein S21 HKO16_11945 PF09424 Yqey-like protein HKO16_11950 PF01435 Peptidase family M48 HKO16_11955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKO16_11955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKO16_11970 PF00156 Phosphoribosyl transferase domain HKO16_11975 PF02674 Colicin V production protein HKO16_11980 PF01180 Dihydroorotate dehydrogenase HKO16_12000 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HKO16_12000 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HKO16_12005 PF00881 Nitroreductase family HKO16_12015 PF00271 Helicase conserved C-terminal domain HKO16_12015 PF00270 DEAD/DEAH box helicase HKO16_12020 PF00313 'Cold-shock' DNA-binding domain HKO16_12030 PF04545 Sigma-70, region 4 HKO16_12030 PF04542 Sigma-70 region 2 HKO16_12030 PF00140 Sigma-70 factor, region 1.2 HKO16_12035 PF04241 Protein of unknown function (DUF423) HKO16_12045 PF05690 Thiazole biosynthesis protein ThiG HKO16_12055 PF03883 Peroxide stress protein YaaA HKO16_12065 PF06956 Regulator of RNA terminal phosphate cyclase HKO16_12065 PF00158 Sigma-54 interaction domain HKO16_12070 PF00753 Metallo-beta-lactamase superfamily HKO16_12075 PF01139 tRNA-splicing ligase RtcB HKO16_12090 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HKO16_12090 PF01137 RNA 3'-terminal phosphate cyclase HKO16_12095 PF01546 Peptidase family M20/M25/M40 HKO16_12095 PF07687 Peptidase dimerisation domain HKO16_12105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKO16_12110 PF00800 Prephenate dehydratase HKO16_12110 PF01842 ACT domain HKO16_12110 PF01817 Chorismate mutase type II HKO16_12115 PF00756 Putative esterase HKO16_12120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_12120 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_12120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_12125 PF00375 Sodium:dicarboxylate symporter family HKO16_12130 PF02885 Glycosyl transferase family, helical bundle domain HKO16_12130 PF00591 Glycosyl transferase family, a/b domain HKO16_12135 PF07023 Protein of unknown function (DUF1315) HKO16_12140 PF01513 ATP-NAD kinase HKO16_12145 PF14814 Bifunctional transglycosylase second domain HKO16_12145 PF00912 Transglycosylase HKO16_12145 PF00905 Penicillin binding protein transpeptidase domain HKO16_12155 PF00293 NUDIX domain HKO16_12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_12165 PF00512 His Kinase A (phospho-acceptor) domain HKO16_12165 PF08521 Two-component sensor kinase N-terminal HKO16_12170 PF00072 Response regulator receiver domain HKO16_12170 PF00486 Transcriptional regulatory protein, C terminal HKO16_12180 PF00437 Type II/IV secretion system protein HKO16_12190 PF01980 tRNA-methyltransferase O HKO16_12190 PF18389 TrmO C-terminal domain HKO16_12195 PF00175 Oxidoreductase NAD-binding domain HKO16_12195 PF00970 Oxidoreductase FAD-binding domain HKO16_12200 PF02567 Phenazine biosynthesis-like protein HKO16_12205 PF00155 Aminotransferase class I and II HKO16_12205 PF00392 Bacterial regulatory proteins, gntR family HKO16_12215 PF00037 4Fe-4S binding domain HKO16_12220 PF00893 Small Multidrug Resistance protein HKO16_12225 PF00005 ABC transporter HKO16_12230 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_12235 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_12240 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKO16_12245 PF03466 LysR substrate binding domain HKO16_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_12250 PF13533 Biotin-lipoyl like HKO16_12255 PF00873 AcrB/AcrD/AcrF family HKO16_12260 PF02321 Outer membrane efflux protein HKO16_12265 PF00464 Serine hydroxymethyltransferase HKO16_12295 PF00005 ABC transporter HKO16_12300 PF01061 ABC-2 type transporter HKO16_12305 PF14489 QueF-like protein HKO16_12305 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HKO16_12315 PF01098 Cell cycle protein HKO16_12320 PF13406 Transglycosylase SLT domain HKO16_12325 PF05036 Sporulation related domain HKO16_12325 PF03330 Lytic transglycolase HKO16_12345 PF12833 Helix-turn-helix domain HKO16_12355 PF00889 Elongation factor TS HKO16_12360 PF00318 Ribosomal protein S2 HKO16_12365 PF00557 Metallopeptidase family M24 HKO16_12375 PF07690 Major Facilitator Superfamily HKO16_12385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKO16_12385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_12390 PF04055 Radical SAM superfamily HKO16_12395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_12395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_12395 PF09317 Domain of unknown function (DUF1974) HKO16_12410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HKO16_12410 PF05221 S-adenosyl-L-homocysteine hydrolase HKO16_12415 PF02219 Methylenetetrahydrofolate reductase HKO16_12420 PF04452 RNA methyltransferase HKO16_12425 PF00563 EAL domain HKO16_12425 PF03707 Bacterial signalling protein N terminal repeat HKO16_12425 PF00990 Diguanylate cyclase, GGDEF domain HKO16_12430 PF00390 Malic enzyme, N-terminal domain HKO16_12430 PF01515 Phosphate acetyl/butaryl transferase HKO16_12430 PF03949 Malic enzyme, NAD binding domain HKO16_12435 PF12627 Probable RNA and SrmB- binding site of polymerase A HKO16_12435 PF01743 Poly A polymerase head domain HKO16_12440 PF13180 PDZ domain HKO16_12445 PF01784 NIF3 (NGG1p interacting factor 3) HKO16_12450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKO16_12450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKO16_12485 PF01040 UbiA prenyltransferase family HKO16_12490 PF04345 Chorismate lyase HKO16_12495 PF03951 Glutamine synthetase, beta-Grasp domain HKO16_12495 PF00120 Glutamine synthetase, catalytic domain HKO16_12500 PF00854 POT family HKO16_12510 PF00117 Glutamine amidotransferase class-I HKO16_12515 PF01433 Peptidase family M1 domain HKO16_12515 PF11838 ERAP1-like C-terminal domain HKO16_12520 PF07715 TonB-dependent Receptor Plug Domain HKO16_12520 PF00593 TonB dependent receptor HKO16_12525 PF02885 Glycosyl transferase family, helical bundle domain HKO16_12525 PF00591 Glycosyl transferase family, a/b domain HKO16_12530 PF00218 Indole-3-glycerol phosphate synthase HKO16_12545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HKO16_12545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKO16_12550 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_12550 PF01799 [2Fe-2S] binding domain HKO16_12560 PF00144 Beta-lactamase HKO16_12575 PF05675 Protein of unknown function (DUF817) HKO16_12580 PF01208 Uroporphyrinogen decarboxylase (URO-D) HKO16_12590 PF00425 chorismate binding enzyme HKO16_12600 PF00975 Thioesterase domain HKO16_12605 PF00005 ABC transporter HKO16_12605 PF00664 ABC transporter transmembrane region HKO16_12610 PF00664 ABC transporter transmembrane region HKO16_12610 PF00005 ABC transporter HKO16_12620 PF00282 Pyridoxal-dependent decarboxylase conserved domain HKO16_12625 PF00550 Phosphopantetheine attachment site HKO16_12625 PF00857 Isochorismatase family HKO16_12630 PF00501 AMP-binding enzyme HKO16_12630 PF13193 AMP-binding enzyme C-terminal domain HKO16_12635 PF00550 Phosphopantetheine attachment site HKO16_12635 PF00668 Condensation domain HKO16_12635 PF00501 AMP-binding enzyme HKO16_12640 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HKO16_12645 PF07715 TonB-dependent Receptor Plug Domain HKO16_12645 PF00593 TonB dependent receptor HKO16_12650 PF01497 Periplasmic binding protein HKO16_12655 PF00005 ABC transporter HKO16_12660 PF01032 FecCD transport family HKO16_12665 PF01032 FecCD transport family HKO16_12670 PF00975 Thioesterase domain HKO16_12670 PF00501 AMP-binding enzyme HKO16_12670 PF00550 Phosphopantetheine attachment site HKO16_12670 PF00668 Condensation domain HKO16_12670 PF13193 AMP-binding enzyme C-terminal domain HKO16_12675 PF13193 AMP-binding enzyme C-terminal domain HKO16_12675 PF00550 Phosphopantetheine attachment site HKO16_12675 PF00668 Condensation domain HKO16_12675 PF00501 AMP-binding enzyme HKO16_12685 PF08348 YheO-like PAS domain HKO16_12685 PF13309 HTH domain HKO16_12690 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_12695 PF02678 Pirin HKO16_12695 PF17954 Quercetinase C-terminal cupin domain HKO16_12730 PF12833 Helix-turn-helix domain HKO16_12730 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKO16_12735 PF01370 NAD dependent epimerase/dehydratase family HKO16_12745 PF00561 alpha/beta hydrolase fold HKO16_12750 PF00743 Flavin-binding monooxygenase-like HKO16_12760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_12760 PF03466 LysR substrate binding domain HKO16_12765 PF00857 Isochorismatase family HKO16_12805 PF04328 Selenoprotein, putative HKO16_12810 PF02554 Carbon starvation protein CstA HKO16_12810 PF13722 5TM C-terminal transporter carbon starvation CstA HKO16_12815 PF08207 Elongation factor P (EF-P) KOW-like domain HKO16_12815 PF01132 Elongation factor P (EF-P) OB domain HKO16_12815 PF09285 Elongation factor P, C-terminal HKO16_12820 PF04055 Radical SAM superfamily HKO16_12830 PF12792 CSS motif domain associated with EAL HKO16_12830 PF00563 EAL domain HKO16_12835 PF01197 Ribosomal protein L31 HKO16_12840 PF13593 SBF-like CPA transporter family (DUF4137) HKO16_12845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKO16_12850 PF07690 Major Facilitator Superfamily HKO16_12855 PF13654 AAA domain HKO16_12855 PF05362 Lon protease (S16) C-terminal proteolytic domain HKO16_12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_12860 PF03466 LysR substrate binding domain HKO16_12865 PF01551 Peptidase family M23 HKO16_12865 PF01476 LysM domain HKO16_12870 PF01975 Survival protein SurE HKO16_12885 PF07943 Penicillin-binding protein 5, C-terminal domain HKO16_12885 PF00768 D-alanyl-D-alanine carboxypeptidase HKO16_12890 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_12905 PF04356 Protein of unknown function (DUF489) HKO16_12910 PF00206 Lyase HKO16_12910 PF08328 Adenylosuccinate lyase C-terminal HKO16_12925 PF01343 Peptidase family S49 HKO16_12925 PF08496 Peptidase family S49 N-terminal HKO16_12930 PF00005 ABC transporter HKO16_12935 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_12940 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_12945 PF12849 PBP superfamily domain HKO16_12950 PF00324 Amino acid permease HKO16_12955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKO16_12955 PF00205 Thiamine pyrophosphate enzyme, central domain HKO16_12955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKO16_12960 PF01037 Lrp/AsnC ligand binding domain HKO16_12965 PF00171 Aldehyde dehydrogenase family HKO16_12970 PF00282 Pyridoxal-dependent decarboxylase conserved domain HKO16_12975 PF00202 Aminotransferase class-III HKO16_12990 PF02525 Flavodoxin-like fold HKO16_12995 PF00487 Fatty acid desaturase HKO16_13000 PF00175 Oxidoreductase NAD-binding domain HKO16_13000 PF00111 2Fe-2S iron-sulfur cluster binding domain HKO16_13000 PF00970 Oxidoreductase FAD-binding domain HKO16_13005 PF00440 Bacterial regulatory proteins, tetR family HKO16_13015 PF12137 RNA polymerase recycling family C-terminal HKO16_13015 PF18339 RapA N-terminal Tudor like domain 1 HKO16_13015 PF00176 SNF2 family N-terminal domain HKO16_13015 PF00271 Helicase conserved C-terminal domain HKO16_13015 PF18337 RapA N-terminal Tudor like domain HKO16_13020 PF00849 RNA pseudouridylate synthase HKO16_13030 PF00202 Aminotransferase class-III HKO16_13035 PF02581 Thiamine monophosphate synthase HKO16_13060 PF05193 Peptidase M16 inactive domain HKO16_13060 PF00675 Insulinase (Peptidase family M16) HKO16_13065 PF02567 Phenazine biosynthesis-like protein HKO16_13075 PF03466 LysR substrate binding domain HKO16_13075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_13080 PF06779 Uncharacterised MFS-type transporter YbfB HKO16_13100 PF00180 Isocitrate/isopropylmalate dehydrogenase HKO16_13105 PF00849 RNA pseudouridylate synthase HKO16_13110 PF03971 Monomeric isocitrate dehydrogenase HKO16_13120 PF07943 Penicillin-binding protein 5, C-terminal domain HKO16_13120 PF00768 D-alanyl-D-alanine carboxypeptidase HKO16_13125 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_13130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_13135 PF00875 DNA photolyase HKO16_13135 PF03441 FAD binding domain of DNA photolyase HKO16_13180 PF03060 Nitronate monooxygenase HKO16_13185 PF01207 Dihydrouridine synthase (Dus) HKO16_13190 PF07759 Protein of unknown function (DUF1615) HKO16_13200 PF01472 PUA domain HKO16_13200 PF00696 Amino acid kinase family HKO16_13205 PF01926 50S ribosome-binding GTPase HKO16_13205 PF01018 GTP1/OBG HKO16_13220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKO16_13220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKO16_13225 PF00892 EamA-like transporter family HKO16_13235 PF12344 Ultra-violet resistance protein B HKO16_13235 PF02151 UvrB/uvrC motif HKO16_13235 PF00271 Helicase conserved C-terminal domain HKO16_13235 PF17757 UvrB interaction domain HKO16_13235 PF04851 Type III restriction enzyme, res subunit HKO16_13245 PF17151 Periplasmic sensor domain HKO16_13245 PF00990 Diguanylate cyclase, GGDEF domain HKO16_13255 PF00155 Aminotransferase class I and II HKO16_13265 PF00012 Hsp70 protein HKO16_13295 PF00106 short chain dehydrogenase HKO16_13300 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HKO16_13305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HKO16_13310 PF02565 Recombination protein O C terminal HKO16_13310 PF11967 Recombination protein O N terminal HKO16_13320 PF07650 KH domain HKO16_13320 PF01926 50S ribosome-binding GTPase HKO16_13325 PF00035 Double-stranded RNA binding motif HKO16_13325 PF14622 Ribonuclease-III-like HKO16_13335 PF10502 Signal peptidase, peptidase S26 HKO16_13340 PF00679 Elongation factor G C-terminus HKO16_13340 PF00009 Elongation factor Tu GTP binding domain HKO16_13340 PF03144 Elongation factor Tu domain 2 HKO16_13340 PF06421 GTP-binding protein LepA C-terminus HKO16_13345 PF13302 Acetyltransferase (GNAT) domain HKO16_13355 PF13180 PDZ domain HKO16_13360 PF00890 FAD binding domain HKO16_13360 PF02910 Fumarate reductase flavoprotein C-term HKO16_13370 PF02223 Thymidylate kinase HKO16_13375 PF02618 YceG-like family HKO16_13380 PF01063 Amino-transferase class IV HKO16_13395 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_13400 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_13405 PF00005 ABC transporter HKO16_13405 PF12857 TOBE-like domain HKO16_13410 PF03466 LysR substrate binding domain HKO16_13410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_13420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HKO16_13420 PF14602 Hexapeptide repeat of succinyl-transferase HKO16_13420 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_13430 PF06508 Queuosine biosynthesis protein QueC HKO16_13445 PF00578 AhpC/TSA family HKO16_13455 PF00293 NUDIX domain HKO16_13455 PF01467 Cytidylyltransferase-like HKO16_13460 PF00378 Enoyl-CoA hydratase/isomerase HKO16_13465 PF01784 NIF3 (NGG1p interacting factor 3) HKO16_13475 PF08722 TnsA endonuclease N terminal HKO16_13475 PF08721 TnsA endonuclease C terminal HKO16_13480 PF00665 Integrase core domain HKO16_13485 PF11426 Tn7 transposition regulator TnsC HKO16_13485 PF13401 AAA domain HKO16_13495 PF13737 Transposase DDE domain HKO16_13535 PF00664 ABC transporter transmembrane region HKO16_13535 PF03412 Peptidase C39 family HKO16_13535 PF00005 ABC transporter HKO16_13540 PF01554 MatE HKO16_13555 PF07715 TonB-dependent Receptor Plug Domain HKO16_13555 PF00593 TonB dependent receptor HKO16_13560 PF00975 Thioesterase domain HKO16_13565 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HKO16_13565 PF01648 4'-phosphopantetheinyl transferase superfamily HKO16_13580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKO16_13580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKO16_13585 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HKO16_13590 PF00501 AMP-binding enzyme HKO16_13590 PF13193 AMP-binding enzyme C-terminal domain HKO16_13595 PF00501 AMP-binding enzyme HKO16_13595 PF00550 Phosphopantetheine attachment site HKO16_13595 PF00975 Thioesterase domain HKO16_13595 PF13193 AMP-binding enzyme C-terminal domain HKO16_13595 PF00668 Condensation domain HKO16_13600 PF00501 AMP-binding enzyme HKO16_13600 PF08242 Methyltransferase domain HKO16_13600 PF00668 Condensation domain HKO16_13600 PF00550 Phosphopantetheine attachment site HKO16_13605 PF00668 Condensation domain HKO16_13605 PF00501 AMP-binding enzyme HKO16_13605 PF00550 Phosphopantetheine attachment site HKO16_13610 PF00106 short chain dehydrogenase HKO16_13615 PF00857 Isochorismatase family HKO16_13615 PF00550 Phosphopantetheine attachment site HKO16_13620 PF00425 chorismate binding enzyme HKO16_13645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HKO16_13645 PF02769 AIR synthase related protein, C-terminal domain HKO16_13645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HKO16_13650 PF01966 HD domain HKO16_13655 PF07499 RuvA, C-terminal domain HKO16_13655 PF01330 RuvA N terminal domain HKO16_13660 PF17864 RuvB AAA lid domain HKO16_13660 PF05491 RuvB C-terminal winged helix domain HKO16_13660 PF05496 Holliday junction DNA helicase RuvB P-loop domain HKO16_13665 PF01546 Peptidase family M20/M25/M40 HKO16_13665 PF07687 Peptidase dimerisation domain HKO16_13670 PF03061 Thioesterase superfamily HKO16_13675 PF01618 MotA/TolQ/ExbB proton channel family HKO16_13680 PF02472 Biopolymer transport protein ExbD/TolR HKO16_13690 PF07676 WD40-like Beta Propeller Repeat HKO16_13690 PF04052 TolB amino-terminal domain HKO16_13695 PF00691 OmpA family HKO16_13705 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HKO16_13710 PF00588 SpoU rRNA Methylase family HKO16_13710 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKO16_13740 PF00308 Bacterial dnaA protein HKO16_13740 PF08299 Bacterial dnaA protein helix-turn-helix HKO16_13740 PF11638 DnaA N-terminal domain HKO16_13745 PF01594 AI-2E family transporter HKO16_13750 PF02769 AIR synthase related protein, C-terminal domain HKO16_13750 PF00586 AIR synthase related protein, N-terminal domain HKO16_13755 PF00551 Formyl transferase HKO16_13760 PF12697 Alpha/beta hydrolase family HKO16_13765 PF06965 Na+/H+ antiporter 1 HKO16_13765 PF01343 Peptidase family S49 HKO16_13775 PF00753 Metallo-beta-lactamase superfamily HKO16_13775 PF13567 Domain of unknown function (DUF4131) HKO16_13775 PF03772 Competence protein HKO16_13780 PF00005 ABC transporter HKO16_13785 PF12704 MacB-like periplasmic core domain HKO16_13785 PF02687 FtsX-like permease family HKO16_13795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HKO16_13810 PF00266 Aminotransferase class-V HKO16_13820 PF13533 Biotin-lipoyl like HKO16_13840 PF00535 Glycosyl transferase family 2 HKO16_13855 PF03989 DNA gyrase C-terminal domain, beta-propeller HKO16_13855 PF00521 DNA gyrase/topoisomerase IV, subunit A HKO16_13860 PF00766 Electron transfer flavoprotein FAD-binding domain HKO16_13860 PF01012 Electron transfer flavoprotein domain HKO16_13865 PF01012 Electron transfer flavoprotein domain HKO16_13870 PF02899 Phage integrase, N-terminal SAM-like domain HKO16_13870 PF00589 Phage integrase family HKO16_13875 PF01810 LysE type translocator HKO16_13880 PF01678 Diaminopimelate epimerase HKO16_13885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKO16_13885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKO16_13895 PF00324 Amino acid permease HKO16_13900 PF18073 Rubredoxin metal binding domain HKO16_13910 PF00152 tRNA synthetases class II (D, K and N) HKO16_13915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKO16_13915 PF11890 Domain of unknown function (DUF3410) HKO16_13915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKO16_13920 PF06803 Protein of unknown function (DUF1232) HKO16_13925 PF02634 FdhD/NarQ family HKO16_13930 PF00384 Molybdopterin oxidoreductase HKO16_13935 PF02595 Glycerate kinase family HKO16_13950 PF00881 Nitroreductase family HKO16_14005 PF09857 Putative toxin of bacterial toxin-antitoxin pair HKO16_14015 PF00550 Phosphopantetheine attachment site HKO16_14015 PF00975 Thioesterase domain HKO16_14015 PF00668 Condensation domain HKO16_14015 PF13193 AMP-binding enzyme C-terminal domain HKO16_14015 PF00501 AMP-binding enzyme HKO16_14030 PF01272 Transcription elongation factor, GreA/GreB, C-term HKO16_14030 PF03449 Transcription elongation factor, N-terminal HKO16_14035 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKO16_14035 PF01464 Transglycosylase SLT domain HKO16_14045 PF01171 PP-loop family HKO16_14050 PF01464 Transglycosylase SLT domain HKO16_14055 PF01435 Peptidase family M48 HKO16_14065 PF00873 AcrB/AcrD/AcrF family HKO16_14070 PF03009 Glycerophosphoryl diester phosphodiesterase family HKO16_14075 PF00753 Metallo-beta-lactamase superfamily HKO16_14080 PF01219 Prokaryotic diacylglycerol kinase HKO16_14085 PF00118 TCP-1/cpn60 chaperonin family HKO16_14090 PF00166 Chaperonin 10 Kd subunit HKO16_14095 PF00149 Calcineurin-like phosphoesterase HKO16_14100 PF00781 Diacylglycerol kinase catalytic domain HKO16_14105 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HKO16_14105 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HKO16_14110 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKO16_14110 PF01266 FAD dependent oxidoreductase HKO16_14115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKO16_14115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKO16_14120 PF00083 Sugar (and other) transporter HKO16_14135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HKO16_14135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HKO16_14150 PF16655 PhoD-like phosphatase, N-terminal domain HKO16_14150 PF09423 PhoD-like phosphatase HKO16_14170 PF00809 Pterin binding enzyme HKO16_14175 PF00004 ATPase family associated with various cellular activities (AAA) HKO16_14175 PF06480 FtsH Extracellular HKO16_14175 PF01434 Peptidase family M41 HKO16_14175 PF17862 AAA+ lid domain HKO16_14180 PF01728 FtsJ-like methyltransferase HKO16_14185 PF01985 CRS1 / YhbY (CRM) domain HKO16_14200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HKO16_14200 PF00117 Glutamine amidotransferase class-I HKO16_14205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_14205 PF02142 MGS-like domain HKO16_14205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HKO16_14210 PF03449 Transcription elongation factor, N-terminal HKO16_14210 PF01272 Transcription elongation factor, GreA/GreB, C-term HKO16_14215 PF00440 Bacterial regulatory proteins, tetR family HKO16_14220 PF01042 Endoribonuclease L-PSP HKO16_14225 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_14230 PF00582 Universal stress protein family HKO16_14235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKO16_14245 PF09587 Bacterial capsule synthesis protein PGA_cap HKO16_14260 PF00999 Sodium/hydrogen exchanger family HKO16_14265 PF04228 Putative neutral zinc metallopeptidase HKO16_14270 PF05661 Protein of unknown function (DUF808) HKO16_14275 PF00579 tRNA synthetases class I (W and Y) HKO16_14280 PF02629 CoA binding domain HKO16_14280 PF00549 CoA-ligase HKO16_14285 PF00549 CoA-ligase HKO16_14285 PF08442 ATP-grasp domain HKO16_14290 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_14290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKO16_14295 PF02817 e3 binding domain HKO16_14295 PF00364 Biotin-requiring enzyme HKO16_14295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKO16_14300 PF00676 Dehydrogenase E1 component HKO16_14300 PF16078 2-oxoglutarate dehydrogenase N-terminus HKO16_14300 PF02779 Transketolase, pyrimidine binding domain HKO16_14300 PF16870 2-oxoglutarate dehydrogenase C-terminal HKO16_14315 PF13085 2Fe-2S iron-sulfur cluster binding domain HKO16_14320 PF02910 Fumarate reductase flavoprotein C-term HKO16_14320 PF00890 FAD binding domain HKO16_14325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKO16_14330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKO16_14335 PF00285 Citrate synthase, C-terminal domain HKO16_14365 PF04539 Sigma-70 region 3 HKO16_14365 PF03979 Sigma-70 factor, region 1.1 HKO16_14365 PF00140 Sigma-70 factor, region 1.2 HKO16_14365 PF04545 Sigma-70, region 4 HKO16_14365 PF04542 Sigma-70 region 2 HKO16_14365 PF04546 Sigma-70, non-essential region HKO16_14370 PF04359 Protein of unknown function (DUF493) HKO16_14375 PF03099 Biotin/lipoate A/B protein ligase family HKO16_14385 PF00465 Iron-containing alcohol dehydrogenase HKO16_14390 PF13520 Amino acid permease HKO16_14395 PF03358 NADPH-dependent FMN reductase HKO16_14400 PF01638 HxlR-like helix-turn-helix HKO16_14405 PF00588 SpoU rRNA Methylase family HKO16_14410 PF14824 Sirohaem biosynthesis protein central HKO16_14410 PF10414 Sirohaem synthase dimerisation region HKO16_14410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKO16_14415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKO16_14415 PF02403 Seryl-tRNA synthetase N-terminal domain HKO16_14425 PF03548 Outer membrane lipoprotein carrier protein LolA HKO16_14430 PF01016 Ribosomal L27 protein HKO16_14435 PF00829 Ribosomal prokaryotic L21 protein HKO16_14445 PF00348 Polyprenyl synthetase HKO16_14455 PF01569 PAP2 superfamily HKO16_14460 PF00529 HlyD membrane-fusion protein of T1SS HKO16_14460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_14465 PF00873 AcrB/AcrD/AcrF family HKO16_14470 PF02321 Outer membrane efflux protein HKO16_14475 PF01906 Putative heavy-metal-binding HKO16_14480 PF01906 Putative heavy-metal-binding HKO16_14500 PF08264 Anticodon-binding domain of tRNA HKO16_14500 PF00133 tRNA synthetases class I (I, L, M and V) HKO16_14500 PF10458 Valyl tRNA synthetase tRNA binding arm HKO16_14520 PF03466 LysR substrate binding domain HKO16_14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_14525 PF00909 Ammonium Transporter Family HKO16_14535 PF08521 Two-component sensor kinase N-terminal HKO16_14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_14535 PF00512 His Kinase A (phospho-acceptor) domain HKO16_14540 PF00486 Transcriptional regulatory protein, C terminal HKO16_14540 PF00072 Response regulator receiver domain HKO16_14545 PF00884 Sulfatase HKO16_14545 PF08019 Phosphoethanolamine transferase EptA/EptB HKO16_14565 PF01734 Patatin-like phospholipase HKO16_14575 PF01145 SPFH domain / Band 7 family HKO16_14580 PF04237 YjbR HKO16_14585 PF00348 Polyprenyl synthetase HKO16_14590 PF04303 PrpF protein HKO16_14595 PF00324 Amino acid permease HKO16_14605 PF01965 DJ-1/PfpI family HKO16_14610 PF08990 Erythronolide synthase docking HKO16_14610 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_14610 PF00698 Acyl transferase domain HKO16_14610 PF09277 Erythronolide synthase, docking HKO16_14610 PF16197 Ketoacyl-synthetase C-terminal extension HKO16_14610 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_14610 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_14610 PF08659 KR domain HKO16_14610 PF00550 Phosphopantetheine attachment site HKO16_14610 PF14765 Polyketide synthase dehydratase HKO16_14615 PF06719 AraC-type transcriptional regulator N-terminus HKO16_14615 PF12833 Helix-turn-helix domain HKO16_14620 PF02673 Bacitracin resistance protein BacA HKO16_14640 PF02525 Flavodoxin-like fold HKO16_14655 PF01507 Phosphoadenosine phosphosulfate reductase family HKO16_14660 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HKO16_14660 PF06974 Protein of unknown function (DUF1298) HKO16_14670 PF00575 S1 RNA binding domain HKO16_14670 PF10150 Ribonuclease E/G family HKO16_14675 PF02545 Maf-like protein HKO16_14680 PF04093 rod shape-determining protein MreD HKO16_14685 PF04085 rod shape-determining protein MreC HKO16_14695 PF02686 Glu-tRNAGln amidotransferase C subunit HKO16_14700 PF01425 Amidase HKO16_14705 PF02637 GatB domain HKO16_14705 PF02934 GatB/GatE catalytic domain HKO16_14730 PF01431 Peptidase family M13 HKO16_14730 PF05649 Peptidase family M13 HKO16_14735 PF05992 SbmA/BacA-like family HKO16_14740 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_14740 PF13291 ACT domain HKO16_14745 PF01734 Patatin-like phospholipase HKO16_14750 PF01235 Sodium:alanine symporter family HKO16_14765 PF00881 Nitroreductase family HKO16_14770 PF07690 Major Facilitator Superfamily HKO16_14775 PF12805 FUSC-like inner membrane protein yccS HKO16_14785 PF00175 Oxidoreductase NAD-binding domain HKO16_14785 PF00258 Flavodoxin HKO16_14785 PF00667 FAD binding domain HKO16_14825 PF03734 L,D-transpeptidase catalytic domain HKO16_14825 PF17969 L,D-transpeptidase C-terminal domain HKO16_14830 PF04304 Protein of unknown function (DUF454) HKO16_14840 PF08085 Entericidin EcnA/B family HKO16_14845 PF07687 Peptidase dimerisation domain HKO16_14845 PF01546 Peptidase family M20/M25/M40 HKO16_14855 PF01584 CheW-like domain HKO16_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_14855 PF01627 Hpt domain HKO16_14855 PF00072 Response regulator receiver domain HKO16_14860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKO16_14860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKO16_14865 PF01584 CheW-like domain HKO16_14870 PF00072 Response regulator receiver domain HKO16_14875 PF00072 Response regulator receiver domain HKO16_14890 PF00873 AcrB/AcrD/AcrF family HKO16_14895 PF03129 Anticodon binding domain HKO16_14895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKO16_14895 PF04073 Aminoacyl-tRNA editing domain HKO16_14900 PF07411 Domain of unknown function (DUF1508) HKO16_14905 PF03831 PhnA domain HKO16_14905 PF08274 PhnA Zinc-Ribbon HKO16_14910 PF04343 Protein of unknown function, DUF488 HKO16_14920 PF01571 Aminomethyltransferase folate-binding domain HKO16_14925 PF13098 Thioredoxin-like domain HKO16_14925 PF10411 Disulfide bond isomerase protein N-terminus HKO16_14935 PF03547 Membrane transport protein HKO16_14940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_14945 PF07715 TonB-dependent Receptor Plug Domain HKO16_14945 PF00593 TonB dependent receptor HKO16_14950 PF02245 Methylpurine-DNA glycosylase (MPG) HKO16_14955 PF06827 Zinc finger found in FPG and IleRS HKO16_14955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKO16_14955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKO16_14970 PF01741 Large-conductance mechanosensitive channel, MscL HKO16_14980 PF00860 Permease family HKO16_14985 PF05175 Methyltransferase small domain HKO16_14985 PF08468 Methyltransferase small domain N-terminal HKO16_14990 PF00324 Amino acid permease HKO16_14995 PF01139 tRNA-splicing ligase RtcB HKO16_15005 PF00691 OmpA family HKO16_15005 PF13505 Outer membrane protein beta-barrel domain HKO16_15015 PF00108 Thiolase, N-terminal domain HKO16_15015 PF02803 Thiolase, C-terminal domain HKO16_15025 PF00893 Small Multidrug Resistance protein HKO16_15035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKO16_15035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKO16_15040 PF01011 PQQ enzyme repeat HKO16_15045 PF04966 Carbohydrate-selective porin, OprB family HKO16_15050 PF02515 CoA-transferase family III HKO16_15055 PF02311 AraC-like ligand binding domain HKO16_15055 PF12833 Helix-turn-helix domain HKO16_15060 PF00108 Thiolase, N-terminal domain HKO16_15060 PF02803 Thiolase, C-terminal domain HKO16_15065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKO16_15065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKO16_15065 PF00378 Enoyl-CoA hydratase/isomerase HKO16_15080 PF13673 Acetyltransferase (GNAT) domain HKO16_15090 PF03006 Haemolysin-III related HKO16_15095 PF00083 Sugar (and other) transporter HKO16_15095 PF07690 Major Facilitator Superfamily HKO16_15105 PF02810 SEC-C motif HKO16_15105 PF01043 SecA preprotein cross-linking domain HKO16_15105 PF07516 SecA Wing and Scaffold domain HKO16_15105 PF07517 SecA DEAD-like domain HKO16_15110 PF00578 AhpC/TSA family HKO16_15110 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKO16_15115 PF00753 Metallo-beta-lactamase superfamily HKO16_15130 PF08245 Mur ligase middle domain HKO16_15130 PF02875 Mur ligase family, glutamate ligase domain HKO16_15135 PF01039 Carboxyl transferase domain HKO16_15140 PF00290 Tryptophan synthase alpha chain HKO16_15165 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_15170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HKO16_15175 PF00593 TonB dependent receptor HKO16_15175 PF07715 TonB-dependent Receptor Plug Domain HKO16_15180 PF01923 Cobalamin adenosyltransferase HKO16_15200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HKO16_15205 PF00072 Response regulator receiver domain HKO16_15205 PF00486 Transcriptional regulatory protein, C terminal HKO16_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_15210 PF00672 HAMP domain HKO16_15210 PF00512 His Kinase A (phospho-acceptor) domain HKO16_15220 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_15220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_15220 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKO16_15220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_15225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_15225 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKO16_15225 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_15225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_15230 PF06146 Phosphate-starvation-inducible E HKO16_15250 PF00593 TonB dependent receptor HKO16_15250 PF07715 TonB-dependent Receptor Plug Domain HKO16_15260 PF01336 OB-fold nucleic acid binding domain HKO16_15260 PF02938 GAD domain HKO16_15260 PF00152 tRNA synthetases class II (D, K and N) HKO16_15275 PF02350 UDP-N-acetylglucosamine 2-epimerase HKO16_15290 PF13439 Glycosyltransferase Family 4 HKO16_15290 PF00534 Glycosyl transferases group 1 HKO16_15295 PF00535 Glycosyl transferase family 2 HKO16_15300 PF01522 Polysaccharide deacetylase HKO16_15315 PF01063 Amino-transferase class IV HKO16_15320 PF08335 GlnD PII-uridylyltransferase HKO16_15320 PF03710 Glutamate-ammonia ligase adenylyltransferase HKO16_15325 PF00512 His Kinase A (phospho-acceptor) domain HKO16_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_15325 PF07689 KaiB domain HKO16_15340 PF01272 Transcription elongation factor, GreA/GreB, C-term HKO16_15340 PF03449 Transcription elongation factor, N-terminal HKO16_15350 PF01381 Helix-turn-helix HKO16_15365 PF13356 Arm DNA-binding domain HKO16_15365 PF00589 Phage integrase family HKO16_15375 PF02547 Queuosine biosynthesis protein HKO16_15390 PF01702 Queuine tRNA-ribosyltransferase HKO16_15395 PF02699 Preprotein translocase subunit HKO16_15400 PF13721 SecD export protein N-terminal TM region HKO16_15400 PF07549 SecD/SecF GG Motif HKO16_15400 PF02355 Protein export membrane protein HKO16_15405 PF02355 Protein export membrane protein HKO16_15405 PF07549 SecD/SecF GG Motif HKO16_15410 PF04127 DNA / pantothenate metabolism flavoprotein HKO16_15410 PF02441 Flavoprotein HKO16_15415 PF04002 RadC-like JAB domain HKO16_15420 PF01062 Bestrophin, RFP-TM, chloride channel HKO16_15425 PF02811 PHP domain HKO16_15430 PF04279 Intracellular septation protein A HKO16_15435 PF03795 YCII-related domain HKO16_15445 PF01266 FAD dependent oxidoreductase HKO16_15445 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HKO16_15455 PF04461 Protein of unknown function (DUF520) HKO16_15460 PF13356 Arm DNA-binding domain HKO16_15460 PF00589 Phage integrase family HKO16_15485 PF13411 MerR HTH family regulatory protein HKO16_15500 PF07670 Nucleoside recognition HKO16_15500 PF02421 Ferrous iron transport protein B HKO16_15500 PF07664 Ferrous iron transport protein B C terminus HKO16_15510 PF00873 AcrB/AcrD/AcrF family HKO16_15515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_15535 PF00394 Multicopper oxidase HKO16_15535 PF07732 Multicopper oxidase HKO16_15535 PF07731 Multicopper oxidase HKO16_15545 PF00486 Transcriptional regulatory protein, C terminal HKO16_15545 PF00072 Response regulator receiver domain HKO16_15550 PF00512 His Kinase A (phospho-acceptor) domain HKO16_15550 PF00672 HAMP domain HKO16_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_15555 PF04945 YHS domain HKO16_15635 PF03887 YfbU domain HKO16_15670 PF03061 Thioesterase superfamily HKO16_15675 PF00085 Thioredoxin HKO16_15680 PF00561 alpha/beta hydrolase fold HKO16_15685 PF04273 Putative phosphatase (DUF442) HKO16_15685 PF00753 Metallo-beta-lactamase superfamily HKO16_15695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKO16_15695 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_15730 PF00990 Diguanylate cyclase, GGDEF domain HKO16_15730 PF17152 Periplasmic sensor domain HKO16_15735 PF00691 OmpA family HKO16_15735 PF01389 OmpA-like transmembrane domain HKO16_15740 PF00149 Calcineurin-like phosphoesterase HKO16_15740 PF10518 TAT (twin-arginine translocation) pathway signal sequence HKO16_15745 PF13091 PLD-like domain HKO16_15755 PF16360 GTP-binding GTPase Middle Region HKO16_15755 PF13167 GTP-binding GTPase N-terminal HKO16_15755 PF01926 50S ribosome-binding GTPase HKO16_15775 PF00149 Calcineurin-like phosphoesterase HKO16_15780 PF00398 Ribosomal RNA adenine dimethylase HKO16_15785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HKO16_15790 PF00572 Ribosomal protein L13 HKO16_15795 PF00380 Ribosomal protein S9/S16 HKO16_15800 PF00043 Glutathione S-transferase, C-terminal domain HKO16_15800 PF13417 Glutathione S-transferase, N-terminal domain HKO16_15805 PF04386 Stringent starvation protein B HKO16_15815 PF02785 Biotin carboxylase C-terminal domain HKO16_15815 PF00289 Biotin carboxylase, N-terminal domain HKO16_15815 PF00364 Biotin-requiring enzyme HKO16_15815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKO16_15825 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_15825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_15825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_15830 PF01039 Carboxyl transferase domain HKO16_15845 PF17932 Tetracyclin repressor-like, C-terminal domain HKO16_15845 PF00440 Bacterial regulatory proteins, tetR family HKO16_15850 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_15895 PF01066 CDP-alcohol phosphatidyltransferase HKO16_15900 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HKO16_15920 PF00056 lactate/malate dehydrogenase, NAD binding domain HKO16_15920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HKO16_15930 PF01551 Peptidase family M23 HKO16_15930 PF10145 Phage-related minor tail protein HKO16_15930 PF01464 Transglycosylase SLT domain HKO16_15935 PF00919 Uncharacterized protein family UPF0004 HKO16_15935 PF01938 TRAM domain HKO16_15935 PF04055 Radical SAM superfamily HKO16_15940 PF02562 PhoH-like protein HKO16_15945 PF02130 Uncharacterized protein family UPF0054 HKO16_15970 PF03358 NADPH-dependent FMN reductase HKO16_15975 PF03631 Virulence factor BrkB HKO16_15980 PF00892 EamA-like transporter family HKO16_15985 PF12833 Helix-turn-helix domain HKO16_15990 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKO16_16035 PF00773 RNB domain HKO16_16035 PF08206 Ribonuclease B OB domain HKO16_16035 PF08461 Ribonuclease R winged-helix domain HKO16_16035 PF17876 Cold shock domain HKO16_16035 PF00575 S1 RNA binding domain HKO16_16040 PF01432 Peptidase family M3 HKO16_16045 PF09526 Probable metal-binding protein (DUF2387) HKO16_16075 PF03937 Flavinator of succinate dehydrogenase HKO16_16080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_16080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_16080 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_16085 PF00743 Flavin-binding monooxygenase-like HKO16_16090 PF01196 Ribosomal protein L17 HKO16_16095 PF01000 RNA polymerase Rpb3/RpoA insert domain HKO16_16095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HKO16_16095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HKO16_16100 PF01479 S4 domain HKO16_16100 PF00163 Ribosomal protein S4/S9 N-terminal domain HKO16_16105 PF00411 Ribosomal protein S11 HKO16_16110 PF00416 Ribosomal protein S13/S18 HKO16_16115 PF00444 Ribosomal protein L36 HKO16_16120 PF00344 SecY translocase HKO16_16125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HKO16_16130 PF00327 Ribosomal protein L30p/L7e HKO16_16135 PF00333 Ribosomal protein S5, N-terminal domain HKO16_16135 PF03719 Ribosomal protein S5, C-terminal domain HKO16_16140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HKO16_16145 PF00347 Ribosomal protein L6 HKO16_16150 PF00410 Ribosomal protein S8 HKO16_16155 PF00253 Ribosomal protein S14p/S29e HKO16_16160 PF00673 ribosomal L5P family C-terminus HKO16_16160 PF00281 Ribosomal protein L5 HKO16_16165 PF00467 KOW motif HKO16_16165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HKO16_16170 PF00238 Ribosomal protein L14p/L23e HKO16_16175 PF00366 Ribosomal protein S17 HKO16_16180 PF00831 Ribosomal L29 protein HKO16_16185 PF00252 Ribosomal protein L16p/L10e HKO16_16190 PF00189 Ribosomal protein S3, C-terminal domain HKO16_16190 PF07650 KH domain HKO16_16195 PF00237 Ribosomal protein L22p/L17e HKO16_16200 PF00203 Ribosomal protein S19 HKO16_16205 PF03947 Ribosomal Proteins L2, C-terminal domain HKO16_16205 PF00181 Ribosomal Proteins L2, RNA binding domain HKO16_16210 PF00276 Ribosomal protein L23 HKO16_16215 PF00573 Ribosomal protein L4/L1 family HKO16_16220 PF00297 Ribosomal protein L3 HKO16_16225 PF00338 Ribosomal protein S10p/S20e HKO16_16230 PF00117 Glutamine amidotransferase class-I HKO16_16235 PF01053 Cys/Met metabolism PLP-dependent enzyme HKO16_16240 PF05872 Bacterial protein of unknown function (DUF853) HKO16_16250 PF00175 Oxidoreductase NAD-binding domain HKO16_16250 PF00042 Globin HKO16_16250 PF00970 Oxidoreductase FAD-binding domain HKO16_16255 PF02082 Transcriptional regulator HKO16_16260 PF01926 50S ribosome-binding GTPase HKO16_16270 PF00375 Sodium:dicarboxylate symporter family HKO16_16280 PF01553 Acyltransferase HKO16_16295 PF17191 RecG wedge domain HKO16_16295 PF00270 DEAD/DEAH box helicase HKO16_16295 PF00271 Helicase conserved C-terminal domain HKO16_16300 PF00156 Phosphoribosyl transferase domain HKO16_16305 PF00293 NUDIX domain HKO16_16310 PF03641 Possible lysine decarboxylase HKO16_16315 PF01544 CorA-like Mg2+ transporter protein HKO16_16325 PF05494 MlaC protein HKO16_16335 PF02405 Permease MlaE HKO16_16340 PF00005 ABC transporter HKO16_16350 PF00271 Helicase conserved C-terminal domain HKO16_16350 PF03880 DbpA RNA binding domain HKO16_16350 PF12343 Cold shock protein DEAD box A HKO16_16350 PF00270 DEAD/DEAH box helicase HKO16_16355 PF00459 Inositol monophosphatase family HKO16_16360 PF02779 Transketolase, pyrimidine binding domain HKO16_16360 PF02780 Transketolase, C-terminal domain HKO16_16360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKO16_16365 PF00925 GTP cyclohydrolase II HKO16_16370 PF01218 Coproporphyrinogen III oxidase HKO16_16375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKO16_16375 PF01488 Shikimate / quinate 5-dehydrogenase HKO16_16375 PF08501 Shikimate dehydrogenase substrate binding domain HKO16_16385 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_16385 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKO16_16385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_16385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_16395 PF04024 PspC domain HKO16_16400 PF00571 CBS domain HKO16_16415 PF07690 Major Facilitator Superfamily HKO16_16420 PF02091 Glycyl-tRNA synthetase alpha subunit HKO16_16425 PF05746 DALR anticodon binding domain HKO16_16425 PF02092 Glycyl-tRNA synthetase beta subunit HKO16_16445 PF00892 EamA-like transporter family HKO16_16450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_16450 PF03466 LysR substrate binding domain HKO16_16465 PF05922 Peptidase inhibitor I9 HKO16_16465 PF00082 Subtilase family HKO16_16480 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HKO16_16485 PF04996 Succinylarginine dihydrolase HKO16_16490 PF00171 Aldehyde dehydrogenase family HKO16_16495 PF04958 Arginine N-succinyltransferase beta subunit HKO16_16500 PF00202 Aminotransferase class-III HKO16_16505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HKO16_16505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HKO16_16510 PF00324 Amino acid permease HKO16_16520 PF08241 Methyltransferase domain HKO16_16540 PF13614 AAA domain HKO16_16545 PF01594 AI-2E family transporter HKO16_16550 PF00080 Copper/zinc superoxide dismutase (SODC) HKO16_16555 PF12805 FUSC-like inner membrane protein yccS HKO16_16560 PF07690 Major Facilitator Superfamily HKO16_16570 PF02525 Flavodoxin-like fold HKO16_16575 PF03992 Antibiotic biosynthesis monooxygenase HKO16_16585 PF02913 FAD linked oxidases, C-terminal domain HKO16_16585 PF01565 FAD binding domain HKO16_16590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKO16_16590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKO16_16595 PF00892 EamA-like transporter family HKO16_16600 PF00892 EamA-like transporter family HKO16_16610 PF01925 Sulfite exporter TauE/SafE HKO16_16615 PF09157 Pseudouridine synthase II TruB, C-terminal HKO16_16615 PF01509 TruB family pseudouridylate synthase (N terminal domain) HKO16_16615 PF16198 tRNA pseudouridylate synthase B C-terminal domain HKO16_16620 PF03280 Proteobacterial lipase chaperone protein HKO16_16625 PF00561 alpha/beta hydrolase fold HKO16_16630 PF01245 Ribosomal protein L19 HKO16_16635 PF01746 tRNA (Guanine-1)-methyltransferase HKO16_16640 PF05239 PRC-barrel domain HKO16_16640 PF01782 RimM N-terminal domain HKO16_16645 PF00886 Ribosomal protein S16 HKO16_16685 PF02401 LytB protein HKO16_16690 PF00625 Guanylate kinase HKO16_16695 PF01192 RNA polymerase Rpb6 HKO16_16705 PF13291 ACT domain HKO16_16705 PF02824 TGS domain HKO16_16705 PF04607 Region found in RelA / SpoT proteins HKO16_16710 PF01042 Endoribonuclease L-PSP HKO16_16715 PF04324 BFD-like [2Fe-2S] binding domain HKO16_16720 PF00210 Ferritin-like domain HKO16_16725 PF04932 O-Antigen ligase HKO16_16725 PF11846 Virulence factor membrane-bound polymerase, C-terminal HKO16_16725 PF15864 Protein glycosylation ligase HKO16_16730 PF00114 Pilin (bacterial filament) HKO16_16730 PF07963 Prokaryotic N-terminal methylation motif HKO16_16740 PF04536 TPM domain HKO16_16745 PF04011 LemA family HKO16_16755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKO16_16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKO16_16760 PF00310 Glutamine amidotransferases class-II HKO16_16760 PF04898 Glutamate synthase central domain HKO16_16760 PF01493 GXGXG motif HKO16_16760 PF01645 Conserved region in glutamate synthase HKO16_16770 PF01761 3-dehydroquinate synthase HKO16_16775 PF01202 Shikimate kinase HKO16_16780 PF07660 Secretin and TonB N terminus short domain HKO16_16780 PF03958 Bacterial type II/III secretion system short domain HKO16_16780 PF00263 Bacterial type II and III secretion system protein HKO16_16780 PF11741 AMIN domain HKO16_16805 PF17092 Penicillin-binding protein OB-like domain HKO16_16805 PF00912 Transglycosylase HKO16_16805 PF00905 Penicillin binding protein transpeptidase domain HKO16_16810 PF13847 Methyltransferase domain HKO16_16820 PF00953 Glycosyl transferase family 4 HKO16_16825 PF02875 Mur ligase family, glutamate ligase domain HKO16_16825 PF01225 Mur ligase family, catalytic domain HKO16_16825 PF08245 Mur ligase middle domain HKO16_16830 PF01225 Mur ligase family, catalytic domain HKO16_16830 PF02875 Mur ligase family, glutamate ligase domain HKO16_16830 PF08245 Mur ligase middle domain HKO16_16835 PF03717 Penicillin-binding Protein dimerisation domain HKO16_16835 PF00905 Penicillin binding protein transpeptidase domain HKO16_16845 PF01795 MraW methylase family HKO16_16860 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKO16_16875 PF00324 Amino acid permease HKO16_16905 PF01545 Cation efflux family HKO16_16910 PF00873 AcrB/AcrD/AcrF family HKO16_16915 PF00529 HlyD membrane-fusion protein of T1SS HKO16_16915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKO16_16940 PF00005 ABC transporter HKO16_16940 PF12848 ABC transporter HKO16_16945 PF01053 Cys/Met metabolism PLP-dependent enzyme HKO16_16950 PF01965 DJ-1/PfpI family HKO16_16965 PF00106 short chain dehydrogenase HKO16_16970 PF01740 STAS domain HKO16_16970 PF00916 Sulfate permease family HKO16_16975 PF00575 S1 RNA binding domain HKO16_16975 PF16921 Tex protein YqgF-like domain HKO16_16975 PF17674 HHH domain HKO16_16975 PF09371 Tex-like protein N-terminal domain HKO16_16980 PF00072 Response regulator receiver domain HKO16_16980 PF00486 Transcriptional regulatory protein, C terminal HKO16_16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_16985 PF00672 HAMP domain HKO16_16985 PF00512 His Kinase A (phospho-acceptor) domain HKO16_16995 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HKO16_16995 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HKO16_17000 PF00583 Acetyltransferase (GNAT) family HKO16_17020 PF00475 Imidazoleglycerol-phosphate dehydratase HKO16_17025 PF00117 Glutamine amidotransferase class-I HKO16_17040 PF00977 Histidine biosynthesis protein HKO16_17055 PF03992 Antibiotic biosynthesis monooxygenase HKO16_17070 PF01636 Phosphotransferase enzyme family HKO16_17075 PF00977 Histidine biosynthesis protein HKO16_17090 PF00230 Major intrinsic protein HKO16_17115 PF02705 K+ potassium transporter HKO16_17125 PF12833 Helix-turn-helix domain HKO16_17150 PF02525 Flavodoxin-like fold HKO16_17155 PF01638 HxlR-like helix-turn-helix HKO16_17185 PF01638 HxlR-like helix-turn-helix HKO16_17205 PF12833 Helix-turn-helix domain HKO16_17205 PF02311 AraC-like ligand binding domain HKO16_17230 PF03466 LysR substrate binding domain HKO16_17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_17235 PF07690 Major Facilitator Superfamily HKO16_17265 PF01593 Flavin containing amine oxidoreductase HKO16_17270 PF05726 Pirin C-terminal cupin domain HKO16_17270 PF02678 Pirin HKO16_17275 PF00857 Isochorismatase family HKO16_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_17285 PF00171 Aldehyde dehydrogenase family HKO16_17290 PF00202 Aminotransferase class-III HKO16_17295 PF00392 Bacterial regulatory proteins, gntR family HKO16_17295 PF00155 Aminotransferase class I and II HKO16_17300 PF00324 Amino acid permease HKO16_17310 PF03591 AzlC protein HKO16_17320 PF00436 Single-strand binding protein family HKO16_17325 PF07690 Major Facilitator Superfamily HKO16_17335 PF02581 Thiamine monophosphate synthase HKO16_17335 PF08543 Phosphomethylpyrimidine kinase HKO16_17335 PF03070 TENA/THI-4/PQQC family HKO16_17340 PF06942 GlpM protein HKO16_17350 PF00107 Zinc-binding dehydrogenase HKO16_17350 PF08240 Alcohol dehydrogenase GroES-like domain HKO16_17355 PF00440 Bacterial regulatory proteins, tetR family HKO16_17355 PF16925 Tetracyclin repressor-like, C-terminal domain HKO16_17360 PF00005 ABC transporter HKO16_17360 PF17760 UvrA interaction domain HKO16_17360 PF17755 UvrA DNA-binding domain HKO16_17365 PF17158 Membrane-associated sensor, integral membrane domain HKO16_17365 PF00990 Diguanylate cyclase, GGDEF domain HKO16_17375 PF02028 BCCT, betaine/carnitine/choline family transporter HKO16_17385 PF00474 Sodium:solute symporter family HKO16_17390 PF04341 Protein of unknown function, DUF485 HKO16_17395 PF00072 Response regulator receiver domain HKO16_17395 PF00512 His Kinase A (phospho-acceptor) domain HKO16_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_17395 PF00672 HAMP domain HKO16_17395 PF01627 Hpt domain HKO16_17405 PF00196 Bacterial regulatory proteins, luxR family HKO16_17405 PF00072 Response regulator receiver domain HKO16_17410 PF03358 NADPH-dependent FMN reductase HKO16_17415 PF00296 Luciferase-like monooxygenase HKO16_17420 PF01037 Lrp/AsnC ligand binding domain HKO16_17425 PF00857 Isochorismatase family HKO16_17430 PF00501 AMP-binding enzyme HKO16_17430 PF16177 Acetyl-coenzyme A synthetase N-terminus HKO16_17430 PF13193 AMP-binding enzyme C-terminal domain HKO16_17440 PF00924 Mechanosensitive ion channel HKO16_17450 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HKO16_17455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKO16_17475 PF02272 DHHA1 domain HKO16_17475 PF17768 RecJ OB domain HKO16_17475 PF01368 DHH family HKO16_17480 PF01243 Pyridoxamine 5'-phosphate oxidase HKO16_17480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKO16_17485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKO16_17485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKO16_17485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKO16_17485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKO16_17490 PF00571 CBS domain HKO16_17490 PF00478 IMP dehydrogenase / GMP reductase domain HKO16_17495 PF03692 Putative zinc- or iron-chelating domain HKO16_17500 PF01613 Flavin reductase like domain HKO16_17500 PF00258 Flavodoxin HKO16_17505 PF07715 TonB-dependent Receptor Plug Domain HKO16_17505 PF00593 TonB dependent receptor HKO16_17510 PF01169 Uncharacterized protein family UPF0016 HKO16_17520 PF02817 e3 binding domain HKO16_17520 PF00364 Biotin-requiring enzyme HKO16_17520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKO16_17525 PF00456 Transketolase, thiamine diphosphate binding domain HKO16_17525 PF17831 Pyruvate dehydrogenase E1 component middle domain HKO16_17530 PF01551 Peptidase family M23 HKO16_17540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HKO16_17545 PF12327 FtsZ family, C-terminal domain HKO16_17545 PF00091 Tubulin/FtsZ family, GTPase domain HKO16_17550 PF02491 SHS2 domain inserted in FTSA HKO16_17555 PF03799 Cell division protein FtsQ HKO16_17555 PF08478 POTRA domain, FtsQ-type HKO16_17560 PF07478 D-ala D-ala ligase C-terminus HKO16_17560 PF01820 D-ala D-ala ligase N-terminus HKO16_17565 PF08245 Mur ligase middle domain HKO16_17565 PF02875 Mur ligase family, glutamate ligase domain HKO16_17565 PF01225 Mur ligase family, catalytic domain HKO16_17570 PF03033 Glycosyltransferase family 28 N-terminal domain HKO16_17570 PF04101 Glycosyltransferase family 28 C-terminal domain HKO16_17575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HKO16_17575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HKO16_17585 PF07715 TonB-dependent Receptor Plug Domain HKO16_17585 PF00593 TonB dependent receptor HKO16_17595 PF00156 Phosphoribosyl transferase domain HKO16_17600 PF03372 Endonuclease/Exonuclease/phosphatase family HKO16_17605 PF03960 ArsC family HKO16_17615 PF07859 alpha/beta hydrolase fold HKO16_17620 PF07694 5TMR of 5TMR-LYT HKO16_17620 PF00990 Diguanylate cyclase, GGDEF domain HKO16_17625 PF11412 Disulphide bond corrector protein DsbC HKO16_17625 PF02683 Cytochrome C biogenesis protein transmembrane region HKO16_17655 PF00576 HIUase/Transthyretin family HKO16_17660 PF00860 Permease family HKO16_17670 PF01494 FAD binding domain HKO16_17675 PF03561 Allantoicase repeat HKO16_17680 PF04115 Ureidoglycolate lyase HKO16_17685 PF00204 DNA gyrase B HKO16_17685 PF01751 Toprim domain HKO16_17685 PF00986 DNA gyrase B subunit, carboxyl terminus HKO16_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKO16_17690 PF05728 Uncharacterised protein family (UPF0227) HKO16_17725 PF01476 LysM domain HKO16_17725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HKO16_17805 PF01758 Sodium Bile acid symporter family HKO16_17815 PF03358 NADPH-dependent FMN reductase HKO16_17825 PF02796 Helix-turn-helix domain of resolvase HKO16_17825 PF00239 Resolvase, N terminal domain HKO16_17845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKO16_17845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKO16_17845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKO16_17845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKO16_17850 PF00809 Pterin binding enzyme HKO16_17870 PF00665 Integrase core domain HKO16_17895 PF02899 Phage integrase, N-terminal SAM-like domain HKO16_17895 PF00589 Phage integrase family HKO16_17925 PF01740 STAS domain HKO16_17925 PF00916 Sulfate permease family HKO16_17930 PF00582 Universal stress protein family HKO16_17960 PF00665 Integrase core domain HKO16_17980 PF01078 Magnesium chelatase, subunit ChlI HKO16_17980 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKO16_17985 PF00155 Aminotransferase class I and II HKO16_17985 PF00392 Bacterial regulatory proteins, gntR family HKO16_17995 PF00701 Dihydrodipicolinate synthetase family HKO16_18005 PF03573 outer membrane porin, OprD family HKO16_18010 PF00719 Inorganic pyrophosphatase HKO16_18025 PF13193 AMP-binding enzyme C-terminal domain HKO16_18025 PF00501 AMP-binding enzyme HKO16_18030 PF00521 DNA gyrase/topoisomerase IV, subunit A HKO16_18030 PF03989 DNA gyrase C-terminal domain, beta-propeller HKO16_18035 PF07690 Major Facilitator Superfamily HKO16_18040 PF03458 UPF0126 domain HKO16_18045 PF02810 SEC-C motif HKO16_18050 PF03741 Integral membrane protein TerC family HKO16_18050 PF03471 Transporter associated domain HKO16_18055 PF03641 Possible lysine decarboxylase HKO16_18060 PF07690 Major Facilitator Superfamily HKO16_18070 PF00817 impB/mucB/samB family HKO16_18070 PF11798 IMS family HHH motif HKO16_18070 PF11799 impB/mucB/samB family C-terminal domain HKO16_18085 PF11842 Domain of unknown function (DUF3362) HKO16_18085 PF04055 Radical SAM superfamily HKO16_18085 PF08497 Radical SAM N-terminal HKO16_18105 PF03358 NADPH-dependent FMN reductase HKO16_18115 PF00291 Pyridoxal-phosphate dependent enzyme HKO16_18150 PF00440 Bacterial regulatory proteins, tetR family HKO16_18175 PF01327 Polypeptide deformylase HKO16_18185 PF17782 DprA winged helix domain HKO16_18185 PF02481 DNA recombination-mediator protein A HKO16_18190 PF01300 Telomere recombination HKO16_18195 PF00892 EamA-like transporter family HKO16_18200 PF00440 Bacterial regulatory proteins, tetR family HKO16_18205 PF07690 Major Facilitator Superfamily HKO16_18215 PF00255 Glutathione peroxidase HKO16_18225 PF11008 Protein of unknown function (DUF2846) HKO16_18230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HKO16_18235 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKO16_18235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKO16_18240 PF00231 ATP synthase HKO16_18245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKO16_18245 PF00306 ATP synthase alpha/beta chain, C terminal domain HKO16_18245 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKO16_18250 PF00213 ATP synthase delta (OSCP) subunit HKO16_18255 PF00430 ATP synthase B/B' CF(0) HKO16_18260 PF00137 ATP synthase subunit C HKO16_18265 PF00119 ATP synthase A chain HKO16_18285 PF00005 ABC transporter HKO16_18290 PF00950 ABC 3 transport family HKO16_18295 PF01810 LysE type translocator HKO16_18300 PF04261 Dyp-type peroxidase family HKO16_18305 PF03949 Malic enzyme, NAD binding domain HKO16_18305 PF00390 Malic enzyme, N-terminal domain HKO16_18310 PF05746 DALR anticodon binding domain HKO16_18310 PF00750 tRNA synthetases class I (R) HKO16_18310 PF03485 Arginyl tRNA synthetase N terminal domain HKO16_18330 PF05726 Pirin C-terminal cupin domain HKO16_18330 PF02678 Pirin HKO16_18340 PF03551 Transcriptional regulator PadR-like family HKO16_18345 PF13427 Domain of unknown function (DUF4111) HKO16_18345 PF01909 Nucleotidyltransferase domain HKO16_18350 PF02540 NAD synthase HKO16_18350 PF00958 GMP synthase C terminal domain HKO16_18350 PF00117 Glutamine amidotransferase class-I HKO16_18355 PF04286 Protein of unknown function (DUF445) HKO16_18360 PF07681 DoxX HKO16_18365 PF09335 SNARE associated Golgi protein HKO16_18380 PF13614 AAA domain HKO16_18390 PF01722 BolA-like protein HKO16_18405 PF01648 4'-phosphopantetheinyl transferase superfamily HKO16_18410 PF16363 GDP-mannose 4,6 dehydratase HKO16_18425 PF13193 AMP-binding enzyme C-terminal domain HKO16_18425 PF00501 AMP-binding enzyme HKO16_18425 PF00975 Thioesterase domain HKO16_18425 PF00668 Condensation domain HKO16_18425 PF00550 Phosphopantetheine attachment site HKO16_18430 PF16197 Ketoacyl-synthetase C-terminal extension HKO16_18430 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_18430 PF00975 Thioesterase domain HKO16_18430 PF14765 Polyketide synthase dehydratase HKO16_18430 PF00550 Phosphopantetheine attachment site HKO16_18430 PF08242 Methyltransferase domain HKO16_18430 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_18435 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_18435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_18435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_18440 PF00501 AMP-binding enzyme HKO16_18445 PF03472 Autoinducer binding domain HKO16_18445 PF00196 Bacterial regulatory proteins, luxR family HKO16_18455 PF00765 Autoinducer synthase HKO16_18460 PF07690 Major Facilitator Superfamily HKO16_18460 PF00083 Sugar (and other) transporter HKO16_18465 PF00378 Enoyl-CoA hydratase/isomerase HKO16_18470 PF00378 Enoyl-CoA hydratase/isomerase HKO16_18475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKO16_18475 PF02770 Acyl-CoA dehydrogenase, middle domain HKO16_18475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKO16_18480 PF13193 AMP-binding enzyme C-terminal domain HKO16_18480 PF00501 AMP-binding enzyme HKO16_18485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKO16_18485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKO16_18490 PF00171 Aldehyde dehydrogenase family HKO16_18500 PF00324 Amino acid permease HKO16_18505 PF00324 Amino acid permease HKO16_18510 PF01042 Endoribonuclease L-PSP HKO16_18515 PF01168 Alanine racemase, N-terminal domain HKO16_18515 PF00842 Alanine racemase, C-terminal domain HKO16_18520 PF01266 FAD dependent oxidoreductase HKO16_18525 PF01037 Lrp/AsnC ligand binding domain HKO16_18535 PF07715 TonB-dependent Receptor Plug Domain HKO16_18535 PF00593 TonB dependent receptor HKO16_18550 PF00849 RNA pseudouridylate synthase HKO16_18600 PF00109 Beta-ketoacyl synthase, N-terminal domain HKO16_18600 PF02801 Beta-ketoacyl synthase, C-terminal domain HKO16_18630 PF00694 Aconitase C-terminal domain HKO16_18630 PF00330 Aconitase family (aconitate hydratase) HKO16_18635 PF00285 Citrate synthase, C-terminal domain HKO16_18645 PF07729 FCD domain HKO16_18645 PF00392 Bacterial regulatory proteins, gntR family HKO16_18655 PF00155 Aminotransferase class I and II HKO16_18660 PF09330 D-lactate dehydrogenase, membrane binding HKO16_18660 PF01565 FAD binding domain HKO16_18665 PF01070 FMN-dependent dehydrogenase HKO16_18670 PF07729 FCD domain HKO16_18670 PF00392 Bacterial regulatory proteins, gntR family HKO16_18675 PF02652 L-lactate permease HKO16_18680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKO16_18680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKO16_18680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKO16_18680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKO16_18685 PF16363 GDP-mannose 4,6 dehydratase HKO16_18690 PF00342 Phosphoglucose isomerase HKO16_18695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKO16_18695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKO16_18695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKO16_18700 PF00483 Nucleotidyl transferase HKO16_18705 PF02397 Bacterial sugar transferase HKO16_18710 PF00535 Glycosyl transferase family 2 HKO16_18715 PF00534 Glycosyl transferases group 1 HKO16_18730 PF13439 Glycosyltransferase Family 4 HKO16_18730 PF00534 Glycosyl transferases group 1 HKO16_18735 PF14602 Hexapeptide repeat of succinyl-transferase HKO16_18735 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_18735 PF12464 Maltose acetyltransferase HKO16_18745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKO16_18750 PF00132 Bacterial transferase hexapeptide (six repeats) HKO16_18755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKO16_18755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKO16_18760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKO16_18760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKO16_18760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKO16_18765 PF02563 Polysaccharide biosynthesis/export protein HKO16_18765 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HKO16_18765 PF10531 SLBB domain HKO16_18770 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKO16_18775 PF13614 AAA domain HKO16_18775 PF13807 G-rich domain on putative tyrosine kinase HKO16_18775 PF02706 Chain length determinant protein HKO16_18780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_18780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKO16_18785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKO16_18785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_18790 PF03023 Lipid II flippase MurJ HKO16_18795 PF01510 N-acetylmuramoyl-L-alanine amidase HKO16_18800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HKO16_18800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HKO16_18810 PF04185 Phosphoesterase family HKO16_18810 PF05506 Domain of unknown function (DUF756) HKO16_18820 PF03725 3' exoribonuclease family, domain 2 HKO16_18820 PF01138 3' exoribonuclease family, domain 1 HKO16_18825 PF00487 Fatty acid desaturase HKO16_18830 PF00175 Oxidoreductase NAD-binding domain HKO16_18835 PF00440 Bacterial regulatory proteins, tetR family HKO16_18840 PF08360 QacR-like protein, C-terminal region HKO16_18840 PF00440 Bacterial regulatory proteins, tetR family HKO16_18845 PF01323 DSBA-like thioredoxin domain HKO16_18855 PF13419 Haloacid dehalogenase-like hydrolase HKO16_18860 PF00106 short chain dehydrogenase HKO16_18875 PF00696 Amino acid kinase family HKO16_18875 PF00583 Acetyltransferase (GNAT) family HKO16_18880 PF09084 NMT1/THI5 like HKO16_18885 PF09084 NMT1/THI5 like HKO16_18890 PF00296 Luciferase-like monooxygenase HKO16_18895 PF00528 Binding-protein-dependent transport system inner membrane component HKO16_18900 PF00005 ABC transporter HKO16_18905 PF00440 Bacterial regulatory proteins, tetR family HKO16_18905 PF08362 YcdC-like protein, C-terminal region HKO16_18910 PF01048 Phosphorylase superfamily HKO16_18920 PF01687 Riboflavin kinase HKO16_18920 PF06574 FAD synthetase HKO16_18925 PF08264 Anticodon-binding domain of tRNA HKO16_18925 PF06827 Zinc finger found in FPG and IleRS HKO16_18925 PF00133 tRNA synthetases class I (I, L, M and V) HKO16_18930 PF01252 Signal peptidase (SPase) II HKO16_18935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKO16_18975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKO16_18980 PF07859 alpha/beta hydrolase fold HKO16_19005 PF01025 GrpE HKO16_19010 PF00012 Hsp70 protein HKO16_19030 PF13406 Transglycosylase SLT domain HKO16_19035 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HKO16_19035 PF02222 ATP-grasp domain HKO16_19040 PF00731 AIR carboxylase HKO16_19050 PF08245 Mur ligase middle domain HKO16_19050 PF01225 Mur ligase family, catalytic domain HKO16_19050 PF02875 Mur ligase family, glutamate ligase domain HKO16_19060 PF01569 PAP2 superfamily HKO16_19065 PF03741 Integral membrane protein TerC family HKO16_19075 PF03738 Glutathionylspermidine synthase preATP-grasp HKO16_19080 PF00355 Rieske [2Fe-2S] domain HKO16_19085 PF01979 Amidohydrolase family HKO16_19090 PF00156 Phosphoribosyl transferase domain HKO16_19100 PF10411 Disulfide bond isomerase protein N-terminus HKO16_19100 PF13098 Thioredoxin-like domain HKO16_19105 PF01545 Cation efflux family HKO16_19105 PF16916 Dimerisation domain of Zinc Transporter HKO16_19110 PF02583 Metal-sensitive transcriptional repressor HKO16_19115 PF10396 GTP-binding protein TrmE N-terminus HKO16_19115 PF12631 MnmE helical domain HKO16_19115 PF01926 50S ribosome-binding GTPase HKO16_19120 PF14849 YidC periplasmic domain HKO16_19120 PF02096 60Kd inner membrane protein HKO16_19125 PF01809 Putative membrane protein insertion efficiency factor HKO16_19130 PF00825 Ribonuclease P HKO16_19135 PF00468 Ribosomal protein L34 HKO16_19145 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKO16_19145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKO16_19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKO16_19150 PF03466 LysR substrate binding domain HKO16_19170 PF01051 Initiator Replication protein HKO16_19185 PF05973 Phage derived protein Gp49-like (DUF891) HKO16_19210 PF00239 Resolvase, N terminal domain HKO16_19210 PF02796 Helix-turn-helix domain of resolvase HKO16_19245 PF04221 RelB antitoxin HKO16_19275 PF00593 TonB dependent receptor HKO16_19275 PF07715 TonB-dependent Receptor Plug Domain