locus-tag class description H0N28_00005 PF11638 DnaA N-terminal domain H0N28_00005 PF08299 Bacterial dnaA protein helix-turn-helix H0N28_00005 PF00308 Bacterial dnaA protein H0N28_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H0N28_00010 PF02767 DNA polymerase III beta subunit, central domain H0N28_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H0N28_00015 PF02463 RecF/RecN/SMC N terminal domain H0N28_00020 PF01751 Toprim domain H0N28_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_00020 PF18053 DNA gyrase B subunit insert domain H0N28_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H0N28_00020 PF00204 DNA gyrase B H0N28_00030 PF09335 SNARE associated Golgi protein H0N28_00035 PF00005 ABC transporter H0N28_00035 PF12848 ABC transporter H0N28_00055 PF01521 Iron-sulphur cluster biosynthesis H0N28_00065 PF03702 Anhydro-N-acetylmuramic acid kinase H0N28_00070 PF00579 tRNA synthetases class I (W and Y) H0N28_00110 PF00209 Sodium:neurotransmitter symporter family H0N28_00120 PF01029 NusB family H0N28_00120 PF01189 16S rRNA methyltransferase RsmB/F H0N28_00125 PF02911 Formyl transferase, C-terminal domain H0N28_00125 PF00551 Formyl transferase H0N28_00130 PF00920 Dehydratase family H0N28_00145 PF03466 LysR substrate binding domain H0N28_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_00150 PF00860 Permease family H0N28_00155 PF00311 Phosphoenolpyruvate carboxylase H0N28_00160 PF00440 Bacterial regulatory proteins, tetR family H0N28_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region H0N28_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_00170 PF00873 AcrB/AcrD/AcrF family H0N28_00180 PF01556 DnaJ C terminal domain H0N28_00180 PF00684 DnaJ central domain H0N28_00180 PF00226 DnaJ domain H0N28_00190 PF05173 Dihydrodipicolinate reductase, C-terminus H0N28_00190 PF01113 Dihydrodipicolinate reductase, N-terminus H0N28_00200 PF07690 Major Facilitator Superfamily H0N28_00205 PF00248 Aldo/keto reductase family H0N28_00210 PF03466 LysR substrate binding domain H0N28_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_00225 PF00392 Bacterial regulatory proteins, gntR family H0N28_00225 PF00155 Aminotransferase class I and II H0N28_00230 PF00107 Zinc-binding dehydrogenase H0N28_00230 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_00235 PF03352 Methyladenine glycosylase H0N28_00250 PF10576 Iron-sulfur binding domain of endonuclease III H0N28_00250 PF00633 Helix-hairpin-helix motif H0N28_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein H0N28_00250 PF14815 NUDIX domain H0N28_00265 PF07043 Protein of unknown function (DUF1328) H0N28_00270 PF03692 Putative zinc- or iron-chelating domain H0N28_00275 PF07995 Glucose / Sorbosone dehydrogenase H0N28_00280 PF16193 AAA C-terminal domain H0N28_00280 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_00280 PF12002 MgsA AAA+ ATPase C terminal H0N28_00285 PF01226 Formate/nitrite transporter H0N28_00295 PF01259 SAICAR synthetase H0N28_00305 PF00701 Dihydrodipicolinate synthetase family H0N28_00310 PF00857 Isochorismatase family H0N28_00315 PF01758 Sodium Bile acid symporter family H0N28_00320 PF01554 MatE H0N28_00325 PF04463 Protein of unknown function (DUF523) H0N28_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H0N28_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H0N28_00345 PF02798 Glutathione S-transferase, N-terminal domain H0N28_00345 PF14497 Glutathione S-transferase, C-terminal domain H0N28_00355 PF00324 Amino acid permease H0N28_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain H0N28_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain H0N28_00375 PF07702 UTRA domain H0N28_00375 PF00392 Bacterial regulatory proteins, gntR family H0N28_00380 PF05962 HutD H0N28_00385 PF01175 Urocanase Rossmann-like domain H0N28_00385 PF17392 Urocanase C-terminal domain H0N28_00385 PF17391 Urocanase N-terminal domain H0N28_00390 PF00221 Aromatic amino acid lyase H0N28_00395 PF00324 Amino acid permease H0N28_00400 PF01979 Amidohydrolase family H0N28_00405 PF00491 Arginase family H0N28_00420 PF01177 Asp/Glu/Hydantoin racemase H0N28_00425 PF01810 LysE type translocator H0N28_00440 PF01380 SIS domain H0N28_00445 PF14602 Hexapeptide repeat of succinyl-transferase H0N28_00445 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_00445 PF12804 MobA-like NTP transferase domain H0N28_00450 PF04608 Phosphatidylglycerophosphatase A H0N28_00455 PF00586 AIR synthase related protein, N-terminal domain H0N28_00455 PF02769 AIR synthase related protein, C-terminal domain H0N28_00460 PF01029 NusB family H0N28_00465 PF00885 6,7-dimethyl-8-ribityllumazine synthase H0N28_00470 PF00925 GTP cyclohydrolase II H0N28_00470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H0N28_00495 PF02580 D-Tyr-tRNA(Tyr) deacylase H0N28_00500 PF06628 Catalase-related immune-responsive H0N28_00500 PF00199 Catalase H0N28_00510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H0N28_00510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H0N28_00515 PF00581 Rhodanese-like domain H0N28_00520 PF02666 Phosphatidylserine decarboxylase H0N28_00530 PF11808 Phosphate regulon sensor protein PhoR H0N28_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_00530 PF00989 PAS fold H0N28_00530 PF00512 His Kinase A (phospho-acceptor) domain H0N28_00535 PF00072 Response regulator receiver domain H0N28_00535 PF00486 Transcriptional regulatory protein, C terminal H0N28_00545 PF00106 short chain dehydrogenase H0N28_00550 PF01554 MatE H0N28_00555 PF00155 Aminotransferase class I and II H0N28_00560 PF04286 Protein of unknown function (DUF445) H0N28_00575 PF04262 Glutamate-cysteine ligase H0N28_00580 PF02600 Disulfide bond formation protein DsbB H0N28_00615 PF07664 Ferrous iron transport protein B C terminus H0N28_00615 PF02421 Ferrous iron transport protein B H0N28_00615 PF07670 Nucleoside recognition H0N28_00635 PF01396 Topoisomerase DNA binding C4 zinc finger H0N28_00635 PF01131 DNA topoisomerase H0N28_00635 PF01751 Toprim domain H0N28_00705 PF00565 Staphylococcal nuclease homologue H0N28_00825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H0N28_00825 PF00437 Type II/IV secretion system protein H0N28_00875 PF13614 AAA domain H0N28_00880 PF17762 HTH domain found in ParB protein H0N28_00880 PF02195 ParB-like nuclease domain H0N28_00890 PF00817 impB/mucB/samB family H0N28_00890 PF11799 impB/mucB/samB family C-terminal domain H0N28_00890 PF13438 Domain of unknown function (DUF4113) H0N28_00890 PF11798 IMS family HHH motif H0N28_00895 PF00717 Peptidase S24-like H0N28_00920 PF01551 Peptidase family M23 H0N28_00920 PF04225 Opacity-associated protein A LysM-like domain H0N28_01035 PF13737 Transposase DDE domain H0N28_01100 PF01435 Peptidase family M48 H0N28_01130 PF00665 Integrase core domain H0N28_01160 PF00582 Universal stress protein family H0N28_01165 PF00916 Sulfate permease family H0N28_01165 PF01740 STAS domain H0N28_01175 PF13335 Magnesium chelatase, subunit ChlI C-terminal H0N28_01175 PF01078 Magnesium chelatase, subunit ChlI H0N28_01185 PF00543 Nitrogen regulatory protein P-II H0N28_01190 PF00909 Ammonium Transporter Family H0N28_01195 PF03477 ATP cone domain H0N28_01200 PF01872 RibD C-terminal domain H0N28_01200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H0N28_01210 PF00677 Lumazine binding domain H0N28_01230 PF02789 Cytosol aminopeptidase family, N-terminal domain H0N28_01230 PF00883 Cytosol aminopeptidase family, catalytic domain H0N28_01240 PF03739 Lipopolysaccharide export system permease LptF/LptG H0N28_01245 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H0N28_01245 PF01676 Metalloenzyme superfamily H0N28_01250 PF03572 Peptidase family S41 H0N28_01250 PF00595 PDZ domain H0N28_01255 PF00158 Sigma-54 interaction domain H0N28_01255 PF00072 Response regulator receiver domain H0N28_01255 PF02954 Bacterial regulatory protein, Fis family H0N28_01260 PF00512 His Kinase A (phospho-acceptor) domain H0N28_01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_01265 PF00072 Response regulator receiver domain H0N28_01265 PF00196 Bacterial regulatory proteins, luxR family H0N28_01270 PF00768 D-alanyl-D-alanine carboxypeptidase H0N28_01275 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_01280 PF01842 ACT domain H0N28_01280 PF00742 Homoserine dehydrogenase H0N28_01280 PF03447 Homoserine dehydrogenase, NAD binding domain H0N28_01285 PF10411 Disulfide bond isomerase protein N-terminus H0N28_01285 PF13098 Thioredoxin-like domain H0N28_01290 PF00589 Phage integrase family H0N28_01290 PF02899 Phage integrase, N-terminal SAM-like domain H0N28_01300 PF02421 Ferrous iron transport protein B H0N28_01300 PF07664 Ferrous iron transport protein B C terminus H0N28_01300 PF07670 Nucleoside recognition H0N28_01310 PF08245 Mur ligase middle domain H0N28_01310 PF02875 Mur ligase family, glutamate ligase domain H0N28_01315 PF01098 Cell cycle protein H0N28_01320 PF00749 tRNA synthetases class I (E and Q), catalytic domain H0N28_01325 PF01258 Prokaryotic dksA/traR C4-type zinc finger H0N28_01330 PF00149 Calcineurin-like phosphoesterase H0N28_01335 PF00293 NUDIX domain H0N28_01340 PF01964 Radical SAM ThiC family H0N28_01340 PF13667 ThiC-associated domain H0N28_01355 PF00892 EamA-like transporter family H0N28_01360 PF02321 Outer membrane efflux protein H0N28_01365 PF01895 PhoU domain H0N28_01370 PF04362 Bacterial Fe(2+) trafficking H0N28_01375 PF14698 Argininosuccinate lyase C-terminal H0N28_01375 PF00206 Lyase H0N28_01380 PF06580 Histidine kinase H0N28_01380 PF07694 5TMR of 5TMR-LYT H0N28_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_01385 PF00072 Response regulator receiver domain H0N28_01385 PF04397 LytTr DNA-binding domain H0N28_01390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H0N28_01390 PF03900 Porphobilinogen deaminase, C-terminal domain H0N28_01415 PF00816 H-NS histone family H0N28_01430 PF03958 Bacterial type II/III secretion system short domain H0N28_01430 PF00263 Bacterial type II and III secretion system protein H0N28_01435 PF00498 FHA domain H0N28_01435 PF12401 Protein of unknown function (DUF2662) H0N28_01440 PF13419 Haloacid dehalogenase-like hydrolase H0N28_01445 PF00425 chorismate binding enzyme H0N28_01445 PF04715 Anthranilate synthase component I, N terminal region H0N28_01470 PF03144 Elongation factor Tu domain 2 H0N28_01470 PF00009 Elongation factor Tu GTP binding domain H0N28_01470 PF03143 Elongation factor Tu C-terminal domain H0N28_01480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H0N28_01485 PF00467 KOW motif H0N28_01485 PF02357 Transcription termination factor nusG H0N28_01490 PF03946 Ribosomal protein L11, N-terminal domain H0N28_01490 PF00298 Ribosomal protein L11, RNA binding domain H0N28_01495 PF00687 Ribosomal protein L1p/L10e family H0N28_01500 PF00466 Ribosomal protein L10 H0N28_01505 PF16320 Ribosomal protein L7/L12 dimerisation domain H0N28_01505 PF00542 Ribosomal protein L7/L12 C-terminal domain H0N28_01510 PF04563 RNA polymerase beta subunit H0N28_01510 PF04561 RNA polymerase Rpb2, domain 2 H0N28_01510 PF10385 RNA polymerase beta subunit external 1 domain H0N28_01510 PF04565 RNA polymerase Rpb2, domain 3 H0N28_01510 PF04560 RNA polymerase Rpb2, domain 7 H0N28_01510 PF00562 RNA polymerase Rpb2, domain 6 H0N28_01515 PF00623 RNA polymerase Rpb1, domain 2 H0N28_01515 PF04983 RNA polymerase Rpb1, domain 3 H0N28_01515 PF05000 RNA polymerase Rpb1, domain 4 H0N28_01515 PF04997 RNA polymerase Rpb1, domain 1 H0N28_01515 PF04998 RNA polymerase Rpb1, domain 5 H0N28_01535 PF00561 alpha/beta hydrolase fold H0N28_01540 PF13726 Na+-H+ antiporter family H0N28_01540 PF03553 Na+/H+ antiporter family H0N28_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_01555 PF00183 Hsp90 protein H0N28_01570 PF01323 DSBA-like thioredoxin domain H0N28_01580 PF09278 MerR, DNA binding H0N28_01580 PF00376 MerR family regulatory protein H0N28_01605 PF00108 Thiolase, N-terminal domain H0N28_01605 PF02803 Thiolase, C-terminal domain H0N28_01610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H0N28_01610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H0N28_01610 PF00378 Enoyl-CoA hydratase/isomerase H0N28_01625 PF01541 GIY-YIG catalytic domain H0N28_01625 PF02151 UvrB/uvrC motif H0N28_01625 PF08459 UvrC Helix-hairpin-helix N-terminal H0N28_01635 PF01066 CDP-alcohol phosphatidyltransferase H0N28_01640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H0N28_01640 PF12833 Helix-turn-helix domain H0N28_01640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H0N28_01640 PF02805 Metal binding domain of Ada H0N28_01665 PF13533 Biotin-lipoyl like H0N28_01670 PF03652 Holliday junction resolvase H0N28_01675 PF02622 Uncharacterized ACR, COG1678 H0N28_01680 PF02463 RecF/RecN/SMC N terminal domain H0N28_01690 PF06865 Pyrimidine/purine nucleoside phosphorylase H0N28_01695 PF00588 SpoU rRNA Methylase family H0N28_01695 PF08032 RNA 2'-O ribose methyltransferase substrate binding H0N28_01705 PF01121 Dephospho-CoA kinase H0N28_01710 PF01478 Type IV leader peptidase family H0N28_01710 PF06750 Bacterial Peptidase A24 N-terminal domain H0N28_01715 PF00482 Type II secretion system (T2SS), protein F H0N28_01720 PF00437 Type II/IV secretion system protein H0N28_01720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H0N28_01725 PF00121 Triosephosphate isomerase H0N28_01730 PF03840 Preprotein translocase SecG subunit H0N28_01745 PF02576 RimP N-terminal domain H0N28_01745 PF17384 RimP C-terminal SH3 domain H0N28_01750 PF00575 S1 RNA binding domain H0N28_01750 PF08529 NusA N-terminal domain H0N28_01750 PF13184 NusA-like KH domain H0N28_01755 PF08364 Bacterial translation initiation factor IF-2 associated region H0N28_01755 PF04760 Translation initiation factor IF-2, N-terminal region H0N28_01755 PF11987 Translation-initiation factor 2 H0N28_01755 PF00009 Elongation factor Tu GTP binding domain H0N28_01760 PF02033 Ribosome-binding factor A H0N28_01765 PF03334 Na+/H+ antiporter subunit H0N28_01770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H0N28_01775 PF01899 Na+/H+ ion antiporter subunit H0N28_01780 PF00361 Proton-conducting membrane transporter H0N28_01785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H0N28_01790 PF13244 Domain of unknown function (DUF4040) H0N28_01790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H0N28_01790 PF00361 Proton-conducting membrane transporter H0N28_01790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H0N28_01805 PF01502 Phosphoribosyl-AMP cyclohydrolase H0N28_01810 PF01494 FAD binding domain H0N28_01815 PF03109 ABC1 family H0N28_01825 PF01209 ubiE/COQ5 methyltransferase family H0N28_01835 PF03976 Polyphosphate kinase 2 (PPK2) H0N28_01845 PF17946 RecC C-terminal domain H0N28_01850 PF13361 UvrD-like helicase C-terminal domain H0N28_01850 PF00580 UvrD/REP helicase N-terminal domain H0N28_01850 PF12705 PD-(D/E)XK nuclease superfamily H0N28_01855 PF13538 UvrD-like helicase C-terminal domain H0N28_01860 PF00144 Beta-lactamase H0N28_01865 PF00312 Ribosomal protein S15 H0N28_01870 PF01138 3' exoribonuclease family, domain 1 H0N28_01870 PF00575 S1 RNA binding domain H0N28_01870 PF03725 3' exoribonuclease family, domain 2 H0N28_01870 PF00013 KH domain H0N28_01870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H0N28_01875 PF01544 CorA-like Mg2+ transporter protein H0N28_01885 PF01556 DnaJ C terminal domain H0N28_01885 PF00226 DnaJ domain H0N28_01895 PF01430 Hsp33 protein H0N28_01900 PF00999 Sodium/hydrogen exchanger family H0N28_01900 PF02254 TrkA-N domain H0N28_01905 PF18074 Primosomal protein N C-terminal domain H0N28_01905 PF00270 DEAD/DEAH box helicase H0N28_01905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H0N28_01905 PF00271 Helicase conserved C-terminal domain H0N28_01905 PF17764 3′ DNA-binding domain (3′BD) H0N28_01910 PF00482 Type II secretion system (T2SS), protein F H0N28_01915 PF08334 Type II secretion system (T2SS), protein G H0N28_01915 PF07963 Prokaryotic N-terminal methylation motif H0N28_01925 PF01588 Putative tRNA binding domain H0N28_01930 PF00795 Carbon-nitrogen hydrolase H0N28_01935 PF03471 Transporter associated domain H0N28_01935 PF00571 CBS domain H0N28_01940 PF01206 Sulfurtransferase TusA H0N28_01960 PF01177 Asp/Glu/Hydantoin racemase H0N28_01970 PF00762 Ferrochelatase H0N28_01975 PF00753 Metallo-beta-lactamase superfamily H0N28_01980 PF03884 DNA gyrase inhibitor YacG H0N28_01990 PF13247 4Fe-4S dicluster domain H0N28_01990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H0N28_01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_02000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H0N28_02010 PF01197 Ribosomal protein L31 H0N28_02015 PF03109 ABC1 family H0N28_02020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_02020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H0N28_02025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H0N28_02025 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_02030 PF01554 MatE H0N28_02040 PF06969 HemN C-terminal domain H0N28_02040 PF04055 Radical SAM superfamily H0N28_02050 PF03466 LysR substrate binding domain H0N28_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_02065 PF13193 AMP-binding enzyme C-terminal domain H0N28_02065 PF00501 AMP-binding enzyme H0N28_02070 PF12111 Polyribonucleotide phosphorylase C terminal H0N28_02070 PF00575 S1 RNA binding domain H0N28_02070 PF10150 Ribonuclease E/G family H0N28_02075 PF00849 RNA pseudouridylate synthase H0N28_02075 PF01479 S4 domain H0N28_02080 PF13419 Haloacid dehalogenase-like hydrolase H0N28_02085 PF08279 HTH domain H0N28_02085 PF13280 WYL domain H0N28_02090 PF02798 Glutathione S-transferase, N-terminal domain H0N28_02100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_02100 PF03466 LysR substrate binding domain H0N28_02105 PF12706 Beta-lactamase superfamily domain H0N28_02110 PF00141 Peroxidase H0N28_02115 PF05524 PEP-utilising enzyme, N-terminal H0N28_02115 PF02896 PEP-utilising enzyme, TIM barrel domain H0N28_02115 PF01590 GAF domain H0N28_02115 PF00391 PEP-utilising enzyme, mobile domain H0N28_02120 PF00293 NUDIX domain H0N28_02130 PF03466 LysR substrate binding domain H0N28_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_02140 PF00330 Aconitase family (aconitate hydratase) H0N28_02145 PF00694 Aconitase C-terminal domain H0N28_02155 PF00180 Isocitrate/isopropylmalate dehydrogenase H0N28_02170 PF01176 Translation initiation factor 1A / IF-1 H0N28_02180 PF01416 tRNA pseudouridine synthase H0N28_02200 PF02774 Semialdehyde dehydrogenase, dimerisation domain H0N28_02200 PF01118 Semialdehyde dehydrogenase, NAD binding domain H0N28_02210 PF00375 Sodium:dicarboxylate symporter family H0N28_02220 PF03279 Bacterial lipid A biosynthesis acyltransferase H0N28_02225 PF01810 LysE type translocator H0N28_02230 PF12848 ABC transporter H0N28_02230 PF00005 ABC transporter H0N28_02230 PF16326 ABC transporter C-terminal domain H0N28_02235 PF04102 SlyX H0N28_02240 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_02240 PF00107 Zinc-binding dehydrogenase H0N28_02245 PF01638 HxlR-like helix-turn-helix H0N28_02255 PF01396 Topoisomerase DNA binding C4 zinc finger H0N28_02255 PF01751 Toprim domain H0N28_02255 PF01131 DNA topoisomerase H0N28_02255 PF08272 Topoisomerase I zinc-ribbon-like H0N28_02270 PF13361 UvrD-like helicase C-terminal domain H0N28_02270 PF00580 UvrD/REP helicase N-terminal domain H0N28_02275 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) H0N28_02300 PF00471 Ribosomal protein L33 H0N28_02305 PF00830 Ribosomal L28 family H0N28_02310 PF00171 Aldehyde dehydrogenase family H0N28_02320 PF01842 ACT domain H0N28_02320 PF00551 Formyl transferase H0N28_02330 PF01618 MotA/TolQ/ExbB proton channel family H0N28_02340 PF01625 Peptide methionine sulfoxide reductase H0N28_02350 PF00186 Dihydrofolate reductase H0N28_02355 PF00303 Thymidylate synthase H0N28_02370 PF01790 Prolipoprotein diacylglyceryl transferase H0N28_02390 PF00902 Sec-independent protein translocase protein (TatC) H0N28_02395 PF02416 mttA/Hcf106 family H0N28_02400 PF02416 mttA/Hcf106 family H0N28_02410 PF01725 Ham1 family H0N28_02420 PF07021 Methionine biosynthesis protein MetW H0N28_02420 PF00561 alpha/beta hydrolase fold H0N28_02425 PF00561 alpha/beta hydrolase fold H0N28_02430 PF08502 LeuA allosteric (dimerisation) domain H0N28_02430 PF00682 HMGL-like H0N28_02435 PF18331 PKHD-type hydroxylase C-terminal domain H0N28_02435 PF13640 2OG-Fe(II) oxygenase superfamily H0N28_02440 PF00593 TonB dependent receptor H0N28_02440 PF07715 TonB-dependent Receptor Plug Domain H0N28_02445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_02445 PF05697 Bacterial trigger factor protein (TF) H0N28_02445 PF05698 Bacterial trigger factor protein (TF) C-terminus H0N28_02450 PF00574 Clp protease H0N28_02455 PF07724 AAA domain (Cdc48 subfamily) H0N28_02455 PF10431 C-terminal, D2-small domain, of ClpB protein H0N28_02455 PF06689 ClpX C4-type zinc finger H0N28_02470 PF05681 Fumarate hydratase (Fumerase) H0N28_02470 PF05683 Fumarase C-terminus H0N28_02475 PF07085 DRTGG domain H0N28_02475 PF01515 Phosphate acetyl/butaryl transferase H0N28_02480 PF00871 Acetokinase family H0N28_02485 PF00920 Dehydratase family H0N28_02490 PF01081 KDPG and KHG aldolase H0N28_02495 PF02447 GntP family permease H0N28_02500 PF01202 Shikimate kinase H0N28_02505 PF00171 Aldehyde dehydrogenase family H0N28_02515 PF00561 alpha/beta hydrolase fold H0N28_02525 PF00933 Glycosyl hydrolase family 3 N terminal domain H0N28_02530 PF17804 Tail specific protease N-terminal domain H0N28_02530 PF00595 PDZ domain H0N28_02530 PF11818 C-terminal domain of tail specific protease (DUF3340) H0N28_02530 PF03572 Peptidase family S41 H0N28_02535 PF13439 Glycosyltransferase Family 4 H0N28_02535 PF00534 Glycosyl transferases group 1 H0N28_02540 PF01569 PAP2 superfamily H0N28_02545 PF04384 Iron-sulphur cluster assembly H0N28_02550 PF00334 Nucleoside diphosphate kinase H0N28_02555 PF04055 Radical SAM superfamily H0N28_02565 PF13464 Domain of unknown function (DUF4115) H0N28_02570 PF04551 GcpE protein H0N28_02575 PF13393 Histidyl-tRNA synthetase H0N28_02575 PF03129 Anticodon binding domain H0N28_02585 PF13360 PQQ-like domain H0N28_02590 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H0N28_02590 PF01926 50S ribosome-binding GTPase H0N28_02605 PF00550 Phosphopantetheine attachment site H0N28_02610 PF00550 Phosphopantetheine attachment site H0N28_02620 PF13193 AMP-binding enzyme C-terminal domain H0N28_02620 PF00501 AMP-binding enzyme H0N28_02625 PF00535 Glycosyl transferase family 2 H0N28_02635 PF00221 Aromatic amino acid lyase H0N28_02655 PF04820 Tryptophan halogenase H0N28_02665 PF02801 Beta-ketoacyl synthase, C-terminal domain H0N28_02665 PF00109 Beta-ketoacyl synthase, N-terminal domain H0N28_02680 PF00109 Beta-ketoacyl synthase, N-terminal domain H0N28_02680 PF02801 Beta-ketoacyl synthase, C-terminal domain H0N28_02695 PF02556 Preprotein translocase subunit SecB H0N28_02700 PF00462 Glutaredoxin H0N28_02710 PF03193 RsgA GTPase H0N28_02715 PF00929 Exonuclease H0N28_02730 PF02321 Outer membrane efflux protein H0N28_02735 PF00005 ABC transporter H0N28_02735 PF02687 FtsX-like permease family H0N28_02735 PF12704 MacB-like periplasmic core domain H0N28_02740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_02755 PF08264 Anticodon-binding domain of tRNA H0N28_02755 PF09334 tRNA synthetases class I (M) H0N28_02755 PF13603 Leucyl-tRNA synthetase, Domain 2 H0N28_02755 PF00133 tRNA synthetases class I (I, L, M and V) H0N28_02765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H0N28_02765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H0N28_02765 PF00205 Thiamine pyrophosphate enzyme, central domain H0N28_02770 PF10369 Small subunit of acetolactate synthase H0N28_02775 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H0N28_02775 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H0N28_02780 PF00563 EAL domain H0N28_02780 PF00990 Diguanylate cyclase, GGDEF domain H0N28_02780 PF03707 Bacterial signalling protein N terminal repeat H0N28_02800 PF04717 Type VI secretion system, phage-baseplate injector H0N28_02800 PF13296 Putative type VI secretion system Rhs element Vgr H0N28_02800 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H0N28_02820 PF00009 Elongation factor Tu GTP binding domain H0N28_02820 PF03144 Elongation factor Tu domain 2 H0N28_02820 PF16658 Class II release factor RF3, C-terminal domain H0N28_02835 PF01026 TatD related DNase H0N28_02840 PF00330 Aconitase family (aconitate hydratase) H0N28_02840 PF00694 Aconitase C-terminal domain H0N28_02845 PF00899 ThiF family H0N28_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_02855 PF03466 LysR substrate binding domain H0N28_02865 PF01207 Dihydrouridine synthase (Dus) H0N28_02870 PF07690 Major Facilitator Superfamily H0N28_02880 PF00892 EamA-like transporter family H0N28_02885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H0N28_02885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H0N28_02890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H0N28_02895 PF02233 NAD(P) transhydrogenase beta subunit H0N28_02900 PF00106 short chain dehydrogenase H0N28_02910 PF01261 Xylose isomerase-like TIM barrel H0N28_02915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H0N28_02915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H0N28_02920 PF00378 Enoyl-CoA hydratase/isomerase H0N28_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_02925 PF00672 HAMP domain H0N28_02925 PF01627 Hpt domain H0N28_02925 PF00512 His Kinase A (phospho-acceptor) domain H0N28_02925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H0N28_02925 PF00072 Response regulator receiver domain H0N28_02930 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_02940 PF05958 tRNA (Uracil-5-)-methyltransferase H0N28_02945 PF13291 ACT domain H0N28_02945 PF04607 Region found in RelA / SpoT proteins H0N28_02945 PF02824 TGS domain H0N28_02955 PF03819 MazG nucleotide pyrophosphohydrolase domain H0N28_02965 PF12626 Polymerase A arginine-rich C-terminus H0N28_02965 PF12627 Probable RNA and SrmB- binding site of polymerase A H0N28_02965 PF01743 Poly A polymerase head domain H0N28_02970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H0N28_02975 PF02548 Ketopantoate hydroxymethyltransferase H0N28_02980 PF02569 Pantoate-beta-alanine ligase H0N28_02985 PF03668 P-loop ATPase protein family H0N28_02990 PF00381 PTS HPr component phosphorylation site H0N28_02995 PF04751 Protein of unknown function (DUF615) H0N28_03000 PF13193 AMP-binding enzyme C-terminal domain H0N28_03000 PF00501 AMP-binding enzyme H0N28_03005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H0N28_03005 PF03129 Anticodon binding domain H0N28_03005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H0N28_03005 PF02824 TGS domain H0N28_03010 PF00707 Translation initiation factor IF-3, C-terminal domain H0N28_03010 PF05198 Translation initiation factor IF-3, N-terminal domain H0N28_03015 PF00043 Glutathione S-transferase, C-terminal domain H0N28_03015 PF02798 Glutathione S-transferase, N-terminal domain H0N28_03020 PF09335 SNARE associated Golgi protein H0N28_03025 PF07690 Major Facilitator Superfamily H0N28_03030 PF01632 Ribosomal protein L35 H0N28_03035 PF00453 Ribosomal protein L20 H0N28_03055 PF01409 tRNA synthetases class II core domain (F) H0N28_03055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H0N28_03060 PF03147 Ferredoxin-fold anticodon binding domain H0N28_03060 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H0N28_03060 PF03484 tRNA synthetase B5 domain H0N28_03060 PF01588 Putative tRNA binding domain H0N28_03060 PF03483 B3/4 domain H0N28_03065 PF00216 Bacterial DNA-binding protein H0N28_03080 PF07497 Rho termination factor, RNA-binding domain H0N28_03080 PF07498 Rho termination factor, N-terminal domain H0N28_03080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H0N28_03085 PF00085 Thioredoxin H0N28_03090 PF02541 Ppx/GppA phosphatase family H0N28_03095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H0N28_03100 PF01171 PP-loop family H0N28_03100 PF09179 TilS substrate binding domain H0N28_03100 PF11734 TilS substrate C-terminal domain H0N28_03105 PF14748 Pyrroline-5-carboxylate reductase dimerisation H0N28_03105 PF03807 NADP oxidoreductase coenzyme F420-dependent H0N28_03110 PF02325 YGGT family H0N28_03115 PF00476 DNA polymerase family A H0N28_03115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H0N28_03115 PF01612 3'-5' exonuclease H0N28_03115 PF01367 5'-3' exonuclease, C-terminal SAM fold H0N28_03135 PF00437 Type II/IV secretion system protein H0N28_03140 PF02566 OsmC-like protein H0N28_03145 PF01047 MarR family H0N28_03155 PF00795 Carbon-nitrogen hydrolase H0N28_03200 PF04963 Sigma-54 factor, core binding domain H0N28_03200 PF04552 Sigma-54, DNA binding domain H0N28_03200 PF00309 Sigma-54 factor, Activator interacting domain (AID) H0N28_03205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H0N28_03210 PF01722 BolA-like protein H0N28_03215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H0N28_03220 PF01634 ATP phosphoribosyltransferase H0N28_03225 PF00815 Histidinol dehydrogenase H0N28_03230 PF00155 Aminotransferase class I and II H0N28_03235 PF00425 chorismate binding enzyme H0N28_03235 PF04715 Anthranilate synthase component I, N terminal region H0N28_03275 PF00293 NUDIX domain H0N28_03280 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_03285 PF00814 Glycoprotease family H0N28_03290 PF04445 Putative SAM-dependent methyltransferase H0N28_03300 PF00756 Putative esterase H0N28_03310 PF00834 Ribulose-phosphate 3 epimerase family H0N28_03325 PF00394 Multicopper oxidase H0N28_03325 PF07731 Multicopper oxidase H0N28_03325 PF07732 Multicopper oxidase H0N28_03340 PF00893 Small Multidrug Resistance protein H0N28_03345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H0N28_03345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H0N28_03350 PF01960 ArgJ family H0N28_03355 PF02445 Quinolinate synthetase A protein H0N28_03380 PF00962 Adenosine/AMP deaminase H0N28_03385 PF00107 Zinc-binding dehydrogenase H0N28_03385 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_03390 PF03466 LysR substrate binding domain H0N28_03395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_03395 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_03395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_03400 PF07690 Major Facilitator Superfamily H0N28_03405 PF02515 CoA-transferase family III H0N28_03415 PF14537 Cytochrome c3 H0N28_03415 PF00890 FAD binding domain H0N28_03420 PF03466 LysR substrate binding domain H0N28_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_03430 PF07690 Major Facilitator Superfamily H0N28_03435 PF03466 LysR substrate binding domain H0N28_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_03445 PF01546 Peptidase family M20/M25/M40 H0N28_03445 PF07687 Peptidase dimerisation domain H0N28_03450 PF12833 Helix-turn-helix domain H0N28_03450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H0N28_03460 PF01810 LysE type translocator H0N28_03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_03465 PF03466 LysR substrate binding domain H0N28_03475 PF01717 Cobalamin-independent synthase, Catalytic domain H0N28_03475 PF08267 Cobalamin-independent synthase, N-terminal domain H0N28_03480 PF01613 Flavin reductase like domain H0N28_03495 PF17074 Darcynin, domain of unknown function H0N28_03505 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) H0N28_03505 PF06594 Haemolysin-type calcium binding protein related domain H0N28_03510 PF17074 Darcynin, domain of unknown function H0N28_03525 PF00268 Ribonucleotide reductase, small chain H0N28_03535 PF02867 Ribonucleotide reductase, barrel domain H0N28_03535 PF00317 Ribonucleotide reductase, all-alpha domain H0N28_03535 PF03477 ATP cone domain H0N28_03540 PF00486 Transcriptional regulatory protein, C terminal H0N28_03540 PF00072 Response regulator receiver domain H0N28_03545 PF00512 His Kinase A (phospho-acceptor) domain H0N28_03545 PF00672 HAMP domain H0N28_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_03555 PF00990 Diguanylate cyclase, GGDEF domain H0N28_03555 PF17151 Periplasmic sensor domain H0N28_03560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H0N28_03565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H0N28_03570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H0N28_03570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H0N28_03580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H0N28_03580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H0N28_03580 PF10531 SLBB domain H0N28_03585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H0N28_03585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H0N28_03585 PF00384 Molybdopterin oxidoreductase H0N28_03590 PF00146 NADH dehydrogenase H0N28_03595 PF12838 4Fe-4S dicluster domain H0N28_03600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H0N28_03605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H0N28_03610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H0N28_03610 PF00361 Proton-conducting membrane transporter H0N28_03615 PF00361 Proton-conducting membrane transporter H0N28_03620 PF00361 Proton-conducting membrane transporter H0N28_03630 PF00313 'Cold-shock' DNA-binding domain H0N28_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_03640 PF03466 LysR substrate binding domain H0N28_03645 PF00175 Oxidoreductase NAD-binding domain H0N28_03645 PF00970 Oxidoreductase FAD-binding domain H0N28_03660 PF05552 Conserved TM helix H0N28_03675 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_03680 PF13533 Biotin-lipoyl like H0N28_03715 PF10609 NUBPL iron-transfer P-loop NTPase H0N28_03720 PF01048 Phosphorylase superfamily H0N28_03735 PF00692 dUTPase H0N28_03765 PF01207 Dihydrouridine synthase (Dus) H0N28_03775 PF00448 SRP54-type protein, GTPase domain H0N28_03775 PF02978 Signal peptide binding domain H0N28_03775 PF02881 SRP54-type protein, helical bundle domain H0N28_03780 PF03309 Type III pantothenate kinase H0N28_03790 PF01925 Sulfite exporter TauE/SafE H0N28_03800 PF06470 SMC proteins Flexible Hinge Domain H0N28_03800 PF02463 RecF/RecN/SMC N terminal domain H0N28_03810 PF00533 BRCA1 C Terminus (BRCT) domain H0N28_03810 PF01653 NAD-dependent DNA ligase adenylation domain H0N28_03810 PF03120 NAD-dependent DNA ligase OB-fold domain H0N28_03810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H0N28_03810 PF12826 Helix-hairpin-helix motif H0N28_03815 PF00210 Ferritin-like domain H0N28_03820 PF07690 Major Facilitator Superfamily H0N28_03825 PF00982 Glycosyltransferase family 20 H0N28_03830 PF02358 Trehalose-phosphatase H0N28_03835 PF08241 Methyltransferase domain H0N28_03835 PF12697 Alpha/beta hydrolase family H0N28_03840 PF04055 Radical SAM superfamily H0N28_03840 PF06968 Biotin and Thiamin Synthesis associated domain H0N28_03840 PF00202 Aminotransferase class-III H0N28_03845 PF00155 Aminotransferase class I and II H0N28_03860 PF01479 S4 domain H0N28_03860 PF00849 RNA pseudouridylate synthase H0N28_03865 PF04079 Segregation and condensation complex subunit ScpB H0N28_03870 PF02616 Segregation and condensation protein ScpA H0N28_03875 PF01300 Telomere recombination H0N28_03880 PF04315 Elongation factor P hydroxylase H0N28_03885 PF02620 Large ribosomal RNA subunit accumulation protein YceD H0N28_03890 PF01783 Ribosomal L32p protein family H0N28_03895 PF00698 Acyl transferase domain H0N28_03905 PF00550 Phosphopantetheine attachment site H0N28_03910 PF04972 BON domain H0N28_03910 PF01476 LysM domain H0N28_03915 PF03070 TENA/THI-4/PQQC family H0N28_03915 PF02581 Thiamine monophosphate synthase H0N28_03915 PF08543 Phosphomethylpyrimidine kinase H0N28_03925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H0N28_03940 PF02261 Aspartate decarboxylase H0N28_03945 PF01195 Peptidyl-tRNA hydrolase H0N28_03950 PF01386 Ribosomal L25p family H0N28_03955 PF14572 Phosphoribosyl synthetase-associated domain H0N28_03955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H0N28_03980 PF08544 GHMP kinases C terminal H0N28_03980 PF00288 GHMP kinases N terminal domain H0N28_03985 PF03550 Outer membrane lipoprotein LolB H0N28_03995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H0N28_03995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H0N28_03995 PF01488 Shikimate / quinate 5-dehydrogenase H0N28_04000 PF01807 CHC2 zinc finger H0N28_04000 PF08275 DNA primase catalytic core, N-terminal domain H0N28_04000 PF10410 DnaB-helicase binding domain of primase H0N28_04000 PF08278 DNA primase DnaG DnaB-binding H0N28_04005 PF13525 Outer membrane lipoprotein H0N28_04010 PF01479 S4 domain H0N28_04010 PF00849 RNA pseudouridylate synthase H0N28_04015 PF02578 Multi-copper polyphenol oxidoreductase laccase H0N28_04020 PF03358 NADPH-dependent FMN reductase H0N28_04025 PF01668 SmpB protein H0N28_04030 PF01467 Cytidylyltransferase-like H0N28_04035 PF00037 4Fe-4S binding domain H0N28_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_04055 PF03466 LysR substrate binding domain H0N28_04060 PF00180 Isocitrate/isopropylmalate dehydrogenase H0N28_04065 PF02028 BCCT, betaine/carnitine/choline family transporter H0N28_04070 PF07859 alpha/beta hydrolase fold H0N28_04075 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H0N28_04075 PF00355 Rieske [2Fe-2S] domain H0N28_04080 PF00171 Aldehyde dehydrogenase family H0N28_04085 PF00970 Oxidoreductase FAD-binding domain H0N28_04085 PF00175 Oxidoreductase NAD-binding domain H0N28_04085 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_04100 PF00795 Carbon-nitrogen hydrolase H0N28_04100 PF02540 NAD synthase H0N28_04110 PF02678 Pirin H0N28_04110 PF05726 Pirin C-terminal cupin domain H0N28_04115 PF03653 Uncharacterised protein family (UPF0093) H0N28_04120 PF00109 Beta-ketoacyl synthase, N-terminal domain H0N28_04120 PF02801 Beta-ketoacyl synthase, C-terminal domain H0N28_04130 PF00164 Ribosomal protein S12/S23 H0N28_04135 PF00177 Ribosomal protein S7p/S5e H0N28_04140 PF03144 Elongation factor Tu domain 2 H0N28_04140 PF00679 Elongation factor G C-terminus H0N28_04140 PF03764 Elongation factor G, domain IV H0N28_04140 PF14492 Elongation Factor G, domain II H0N28_04140 PF00009 Elongation factor Tu GTP binding domain H0N28_04145 PF03143 Elongation factor Tu C-terminal domain H0N28_04145 PF03144 Elongation factor Tu domain 2 H0N28_04145 PF00009 Elongation factor Tu GTP binding domain H0N28_04160 PF00583 Acetyltransferase (GNAT) family H0N28_04165 PF04377 Arginine-tRNA-protein transferase, C terminus H0N28_04165 PF04376 Arginine-tRNA-protein transferase, N terminus H0N28_04170 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H0N28_04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_04180 PF01580 FtsK/SpoIIIE family H0N28_04180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H0N28_04180 PF17854 FtsK alpha domain H0N28_04180 PF09397 Ftsk gamma domain H0N28_04185 PF01810 LysE type translocator H0N28_04195 PF03776 Septum formation topological specificity factor MinE H0N28_04200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H0N28_04205 PF03775 Septum formation inhibitor MinC, C-terminal domain H0N28_04215 PF01553 Acyltransferase H0N28_04220 PF13488 Glycine zipper H0N28_04220 PF00691 OmpA family H0N28_04225 PF13361 UvrD-like helicase C-terminal domain H0N28_04225 PF00580 UvrD/REP helicase N-terminal domain H0N28_04230 PF00692 dUTPase H0N28_04235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H0N28_04235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H0N28_04235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H0N28_04235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H0N28_04240 PF00696 Amino acid kinase family H0N28_04250 PF13230 Glutamine amidotransferases class-II H0N28_04255 PF01814 Hemerythrin HHE cation binding domain H0N28_04265 PF03658 RnfH family Ubiquitin H0N28_04270 PF04355 SmpA / OmlA family H0N28_04275 PF01475 Ferric uptake regulator family H0N28_04280 PF00437 Type II/IV secretion system protein H0N28_04285 PF00437 Type II/IV secretion system protein H0N28_04290 PF01168 Alanine racemase, N-terminal domain H0N28_04300 PF00149 Calcineurin-like phosphoesterase H0N28_04300 PF12320 Type 5 capsule protein repressor C-terminal domain H0N28_04320 PF01370 NAD dependent epimerase/dehydratase family H0N28_04320 PF08338 Domain of unknown function (DUF1731) H0N28_04325 PF01266 FAD dependent oxidoreductase H0N28_04330 PF00490 Delta-aminolevulinic acid dehydratase H0N28_04335 PF03061 Thioesterase superfamily H0N28_04340 PF13533 Biotin-lipoyl like H0N28_04345 PF07690 Major Facilitator Superfamily H0N28_04390 PF00083 Sugar (and other) transporter H0N28_04395 PF00701 Dihydrodipicolinate synthetase family H0N28_04425 PF02574 Homocysteine S-methyltransferase H0N28_04435 PF06039 Malate:quinone oxidoreductase (Mqo) H0N28_04440 PF00732 GMC oxidoreductase H0N28_04440 PF05199 GMC oxidoreductase H0N28_04445 PF00171 Aldehyde dehydrogenase family H0N28_04450 PF00440 Bacterial regulatory proteins, tetR family H0N28_04450 PF13977 BetI-type transcriptional repressor, C-terminal H0N28_04455 PF02028 BCCT, betaine/carnitine/choline family transporter H0N28_04460 PF02028 BCCT, betaine/carnitine/choline family transporter H0N28_04470 PF03061 Thioesterase superfamily H0N28_04480 PF07683 Cobalamin synthesis protein cobW C-terminal domain H0N28_04480 PF02492 CobW/HypB/UreG, nucleotide-binding domain H0N28_04485 PF00375 Sodium:dicarboxylate symporter family H0N28_04490 PF07152 YaeQ protein H0N28_04495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_04500 PF01522 Polysaccharide deacetylase H0N28_04500 PF14883 Hypothetical glycosyl hydrolase family 13 H0N28_04505 PF00535 Glycosyl transferase family 2 H0N28_04515 PF00378 Enoyl-CoA hydratase/isomerase H0N28_04530 PF09339 IclR helix-turn-helix domain H0N28_04530 PF01614 Bacterial transcriptional regulator H0N28_04535 PF00355 Rieske [2Fe-2S] domain H0N28_04545 PF00355 Rieske [2Fe-2S] domain H0N28_04555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H0N28_04560 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_04560 PF14759 Reductase C-terminal H0N28_04565 PF07690 Major Facilitator Superfamily H0N28_04575 PF12697 Alpha/beta hydrolase family H0N28_04585 PF03447 Homoserine dehydrogenase, NAD binding domain H0N28_04585 PF01958 Domain of unknown function DUF108 H0N28_04590 PF00171 Aldehyde dehydrogenase family H0N28_04595 PF00205 Thiamine pyrophosphate enzyme, central domain H0N28_04595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H0N28_04595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H0N28_04605 PF07690 Major Facilitator Superfamily H0N28_04610 PF01327 Polypeptide deformylase H0N28_04615 PF04960 Glutaminase H0N28_04620 PF12833 Helix-turn-helix domain H0N28_04620 PF02311 AraC-like ligand binding domain H0N28_04625 PF07690 Major Facilitator Superfamily H0N28_04635 PF01263 Aldose 1-epimerase H0N28_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_04645 PF03466 LysR substrate binding domain H0N28_04655 PF07690 Major Facilitator Superfamily H0N28_04660 PF00456 Transketolase, thiamine diphosphate binding domain H0N28_04665 PF02779 Transketolase, pyrimidine binding domain H0N28_04665 PF02780 Transketolase, C-terminal domain H0N28_04670 PF00809 Pterin binding enzyme H0N28_04670 PF02574 Homocysteine S-methyltransferase H0N28_04670 PF02310 B12 binding domain H0N28_04670 PF02607 B12 binding domain H0N28_04670 PF02965 Vitamin B12 dependent methionine synthase, activation domain H0N28_04675 PF01384 Phosphate transporter family H0N28_04680 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_04695 PF03781 Sulfatase-modifying factor enzyme 1 H0N28_04700 PF00884 Sulfatase H0N28_04710 PF01521 Iron-sulphur cluster biosynthesis H0N28_04710 PF01106 NifU-like domain H0N28_04715 PF00593 TonB dependent receptor H0N28_04715 PF07715 TonB-dependent Receptor Plug Domain H0N28_04725 PF00561 alpha/beta hydrolase fold H0N28_04730 PF00484 Carbonic anhydrase H0N28_04735 PF13472 GDSL-like Lipase/Acylhydrolase family H0N28_04740 PF00005 ABC transporter H0N28_04750 PF01694 Rhomboid family H0N28_04755 PF00912 Transglycosylase H0N28_04760 PF13090 Polyphosphate kinase C-terminal domain 2 H0N28_04760 PF02503 Polyphosphate kinase middle domain H0N28_04760 PF13089 Polyphosphate kinase N-terminal domain H0N28_04760 PF17941 Polyphosphate kinase C-terminal domain 1 H0N28_04775 PF03466 LysR substrate binding domain H0N28_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_04780 PF00561 alpha/beta hydrolase fold H0N28_04785 PF18113 Rubredoxin binding C-terminal domain H0N28_04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_04790 PF00301 Rubredoxin H0N28_04805 PF01336 OB-fold nucleic acid binding domain H0N28_04805 PF00152 tRNA synthetases class II (D, K and N) H0N28_04810 PF14052 Capsule assembly protein Wzi H0N28_04820 PF01507 Phosphoadenosine phosphosulfate reductase family H0N28_04825 PF00009 Elongation factor Tu GTP binding domain H0N28_04840 PF03600 Citrate transporter H0N28_04845 PF01595 Cyclin M transmembrane N-terminal domain H0N28_04845 PF03471 Transporter associated domain H0N28_04845 PF00571 CBS domain H0N28_04850 PF03466 LysR substrate binding domain H0N28_04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_04855 PF00463 Isocitrate lyase family H0N28_04870 PF01774 UreD urease accessory protein H0N28_04875 PF00547 Urease, gamma subunit H0N28_04880 PF00699 Urease beta subunit H0N28_04890 PF00449 Urease alpha-subunit, N-terminal domain H0N28_04890 PF01979 Amidohydrolase family H0N28_04895 PF02814 UreE urease accessory protein, N-terminal domain H0N28_04895 PF05194 UreE urease accessory protein, C-terminal domain H0N28_04900 PF01730 UreF H0N28_04905 PF02492 CobW/HypB/UreG, nucleotide-binding domain H0N28_04920 PF00905 Penicillin binding protein transpeptidase domain H0N28_04920 PF03717 Penicillin-binding Protein dimerisation domain H0N28_04935 PF05191 Adenylate kinase, active site lid H0N28_04945 PF10576 Iron-sulfur binding domain of endonuclease III H0N28_04945 PF00730 HhH-GPD superfamily base excision DNA repair protein H0N28_04945 PF00633 Helix-hairpin-helix motif H0N28_04950 PF04060 Putative Fe-S cluster H0N28_04955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H0N28_04955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H0N28_04965 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H0N28_04970 PF02590 Predicted SPOUT methyltransferase H0N28_04975 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_04975 PF02190 ATP-dependent protease La (LON) substrate-binding domain H0N28_04975 PF05362 Lon protease (S16) C-terminal proteolytic domain H0N28_04980 PF05662 Coiled stalk of trimeric autotransporter adhesin H0N28_04980 PF05658 Head domain of trimeric autotransporter adhesin H0N28_04980 PF03895 YadA-like membrane anchor domain H0N28_04980 PF13018 Extended Signal Peptide of Type V secretion system H0N28_04985 PF04355 SmpA / OmlA family H0N28_04985 PF00691 OmpA family H0N28_04990 PF01812 5-formyltetrahydrofolate cyclo-ligase family H0N28_05030 PF05195 Aminopeptidase P, N-terminal domain H0N28_05030 PF00557 Metallopeptidase family M24 H0N28_05035 PF01494 FAD binding domain H0N28_05040 PF01494 FAD binding domain H0N28_05050 PF13411 MerR HTH family regulatory protein H0N28_05060 PF01810 LysE type translocator H0N28_05065 PF03466 LysR substrate binding domain H0N28_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_05075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H0N28_05080 PF02021 Uncharacterised protein family UPF0102 H0N28_05085 PF04972 BON domain H0N28_05095 PF09297 NADH pyrophosphatase zinc ribbon domain H0N28_05095 PF00293 NUDIX domain H0N28_05105 PF00929 Exonuclease H0N28_05110 PF01476 LysM domain H0N28_05110 PF01464 Transglycosylase SLT domain H0N28_05110 PF01464 Transglycosylase SLT domain H0N28_05110 PF01476 LysM domain H0N28_05115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H0N28_05120 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_05125 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_05125 PF12911 N-terminal TM domain of oligopeptide transport permease C H0N28_05130 PF00005 ABC transporter H0N28_05130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H0N28_05135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_05140 PF07715 TonB-dependent Receptor Plug Domain H0N28_05140 PF00593 TonB dependent receptor H0N28_05150 PF00929 Exonuclease H0N28_05155 PF01979 Amidohydrolase family H0N28_05160 PF00990 Diguanylate cyclase, GGDEF domain H0N28_05160 PF01590 GAF domain H0N28_05160 PF00563 EAL domain H0N28_05160 PF00360 Phytochrome region H0N28_05165 PF00764 Arginosuccinate synthase H0N28_05175 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_05175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_05210 PF01042 Endoribonuclease L-PSP H0N28_05215 PF01266 FAD dependent oxidoreductase H0N28_05220 PF03466 LysR substrate binding domain H0N28_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_05235 PF01494 FAD binding domain H0N28_05240 PF03180 NLPA lipoprotein H0N28_05265 PF00324 Amino acid permease H0N28_05270 PF01266 FAD dependent oxidoreductase H0N28_05275 PF00324 Amino acid permease H0N28_05285 PF00392 Bacterial regulatory proteins, gntR family H0N28_05285 PF07729 FCD domain H0N28_05295 PF00171 Aldehyde dehydrogenase family H0N28_05305 PF00202 Aminotransferase class-III H0N28_05310 PF04958 Arginine N-succinyltransferase beta subunit H0N28_05315 PF00324 Amino acid permease H0N28_05335 PF00171 Aldehyde dehydrogenase family H0N28_05340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H0N28_05340 PF12833 Helix-turn-helix domain H0N28_05345 PF00892 EamA-like transporter family H0N28_05350 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H0N28_05350 PF08666 SAF domain H0N28_05355 PF07690 Major Facilitator Superfamily H0N28_05360 PF13378 Enolase C-terminal domain-like H0N28_05365 PF00701 Dihydrodipicolinate synthetase family H0N28_05370 PF00171 Aldehyde dehydrogenase family H0N28_05375 PF07729 FCD domain H0N28_05375 PF00392 Bacterial regulatory proteins, gntR family H0N28_05380 PF07519 Tannase and feruloyl esterase H0N28_05395 PF03573 outer membrane porin, OprD family H0N28_05400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_05400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_05400 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_05410 PF00171 Aldehyde dehydrogenase family H0N28_05415 PF00378 Enoyl-CoA hydratase/isomerase H0N28_05420 PF07690 Major Facilitator Superfamily H0N28_05435 PF00175 Oxidoreductase NAD-binding domain H0N28_05435 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_05440 PF00355 Rieske [2Fe-2S] domain H0N28_05445 PF07690 Major Facilitator Superfamily H0N28_05455 PF05199 GMC oxidoreductase H0N28_05460 PF07859 alpha/beta hydrolase fold H0N28_05465 PF00106 short chain dehydrogenase H0N28_05470 PF00743 Flavin-binding monooxygenase-like H0N28_05475 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H0N28_05475 PF12833 Helix-turn-helix domain H0N28_05480 PF04072 Leucine carboxyl methyltransferase H0N28_05485 PF00743 Flavin-binding monooxygenase-like H0N28_05490 PF00106 short chain dehydrogenase H0N28_05500 PF17932 Tetracyclin repressor-like, C-terminal domain H0N28_05500 PF00440 Bacterial regulatory proteins, tetR family H0N28_05505 PF02678 Pirin H0N28_05505 PF17954 Quercetinase C-terminal cupin domain H0N28_05515 PF00106 short chain dehydrogenase H0N28_05520 PF00743 Flavin-binding monooxygenase-like H0N28_05530 PF00860 Permease family H0N28_05535 PF00962 Adenosine/AMP deaminase H0N28_05540 PF01292 Prokaryotic cytochrome b561 H0N28_05550 PF01351 Ribonuclease HII H0N28_05555 PF02599 Global regulator protein family H0N28_05560 PF00696 Amino acid kinase family H0N28_05560 PF13840 ACT domain H0N28_05560 PF01842 ACT domain H0N28_05610 PF01726 LexA DNA binding domain H0N28_05610 PF00717 Peptidase S24-like H0N28_05615 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT H0N28_05630 PF00145 C-5 cytosine-specific DNA methylase H0N28_05700 PF06381 Protein of unknown function (DUF1073) H0N28_05720 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) H0N28_05835 PF11799 impB/mucB/samB family C-terminal domain H0N28_05835 PF13438 Domain of unknown function (DUF4113) H0N28_05835 PF00817 impB/mucB/samB family H0N28_05840 PF00717 Peptidase S24-like H0N28_05855 PF13356 Arm DNA-binding domain H0N28_05855 PF00589 Phage integrase family H0N28_05860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H0N28_05860 PF01411 tRNA synthetases class II (A) H0N28_05860 PF02272 DHHA1 domain H0N28_05865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H0N28_05865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H0N28_05870 PF13393 Histidyl-tRNA synthetase H0N28_05875 PF00709 Adenylosuccinate synthetase H0N28_05890 PF00248 Aldo/keto reductase family H0N28_05895 PF13545 Crp-like helix-turn-helix domain H0N28_05895 PF00027 Cyclic nucleotide-binding domain H0N28_05900 PF02566 OsmC-like protein H0N28_05915 PF10431 C-terminal, D2-small domain, of ClpB protein H0N28_05915 PF02861 Clp amino terminal domain, pathogenicity island component H0N28_05915 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_05915 PF07724 AAA domain (Cdc48 subfamily) H0N28_05915 PF17871 AAA lid domain H0N28_05930 PF10672 S-adenosylmethionine-dependent methyltransferase H0N28_05930 PF02926 THUMP domain H0N28_05930 PF01170 Putative RNA methylase family UPF0020 H0N28_05940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H0N28_05940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H0N28_05945 PF01979 Amidohydrolase family H0N28_05950 PF00691 OmpA family H0N28_05950 PF13488 Glycine zipper H0N28_05960 PF13417 Glutathione S-transferase, N-terminal domain H0N28_05960 PF00043 Glutathione S-transferase, C-terminal domain H0N28_05965 PF02390 Putative methyltransferase H0N28_05975 PF02798 Glutathione S-transferase, N-terminal domain H0N28_05975 PF00043 Glutathione S-transferase, C-terminal domain H0N28_05985 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_05985 PF13192 Thioredoxin domain H0N28_06005 PF10417 C-terminal domain of 1-Cys peroxiredoxin H0N28_06005 PF00578 AhpC/TSA family H0N28_06010 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H0N28_06010 PF00270 DEAD/DEAH box helicase H0N28_06010 PF11898 Domain of unknown function (DUF3418) H0N28_06010 PF04408 Helicase associated domain (HA2) H0N28_06010 PF00271 Helicase conserved C-terminal domain H0N28_06015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H0N28_06015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H0N28_06025 PF07690 Major Facilitator Superfamily H0N28_06035 PF00106 short chain dehydrogenase H0N28_06040 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_06040 PF00175 Oxidoreductase NAD-binding domain H0N28_06040 PF00970 Oxidoreductase FAD-binding domain H0N28_06045 PF00866 Ring hydroxylating beta subunit H0N28_06050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H0N28_06050 PF00355 Rieske [2Fe-2S] domain H0N28_06055 PF03466 LysR substrate binding domain H0N28_06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06065 PF00403 Heavy-metal-associated domain H0N28_06070 PF00376 MerR family regulatory protein H0N28_06070 PF09278 MerR, DNA binding H0N28_06105 PF13742 OB-fold nucleic acid binding domain H0N28_06105 PF02601 Exonuclease VII, large subunit H0N28_06135 PF01810 LysE type translocator H0N28_06140 PF00313 'Cold-shock' DNA-binding domain H0N28_06150 PF14748 Pyrroline-5-carboxylate reductase dimerisation H0N28_06150 PF03807 NADP oxidoreductase coenzyme F420-dependent H0N28_06175 PF07690 Major Facilitator Superfamily H0N28_06180 PF01638 HxlR-like helix-turn-helix H0N28_06205 PF09190 DALR domain H0N28_06205 PF01406 tRNA synthetases class I (C) catalytic domain H0N28_06210 PF00571 CBS domain H0N28_06210 PF01380 SIS domain H0N28_06225 PF03968 OstA-like protein H0N28_06230 PF12399 Branched-chain amino acid ATP-binding cassette transporter H0N28_06230 PF00005 ABC transporter H0N28_06235 PF02321 Outer membrane efflux protein H0N28_06240 PF00664 ABC transporter transmembrane region H0N28_06240 PF00005 ABC transporter H0N28_06240 PF03412 Peptidase C39 family H0N28_06250 PF01205 Uncharacterized protein family UPF0029 H0N28_06255 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_06265 PF01596 O-methyltransferase H0N28_06275 PF11953 Domain of unknown function (DUF3470) H0N28_06275 PF00037 4Fe-4S binding domain H0N28_06285 PF00488 MutS domain V H0N28_06285 PF01624 MutS domain I H0N28_06285 PF05188 MutS domain II H0N28_06285 PF05192 MutS domain III H0N28_06285 PF05190 MutS family domain IV H0N28_06290 PF01037 Lrp/AsnC ligand binding domain H0N28_06295 PF00892 EamA-like transporter family H0N28_06300 PF00563 EAL domain H0N28_06300 PF03707 Bacterial signalling protein N terminal repeat H0N28_06300 PF00990 Diguanylate cyclase, GGDEF domain H0N28_06305 PF03279 Bacterial lipid A biosynthesis acyltransferase H0N28_06310 PF01544 CorA-like Mg2+ transporter protein H0N28_06325 PF07690 Major Facilitator Superfamily H0N28_06345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H0N28_06345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H0N28_06365 PF13419 Haloacid dehalogenase-like hydrolase H0N28_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06380 PF03466 LysR substrate binding domain H0N28_06385 PF01566 Natural resistance-associated macrophage protein H0N28_06390 PF03746 LamB/YcsF family H0N28_06395 PF07286 Protein of unknown function (DUF1445) H0N28_06405 PF00289 Biotin carboxylase, N-terminal domain H0N28_06405 PF02785 Biotin carboxylase C-terminal domain H0N28_06405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_06405 PF00364 Biotin-requiring enzyme H0N28_06410 PF00654 Voltage gated chloride channel H0N28_06415 PF00684 DnaJ central domain H0N28_06415 PF01556 DnaJ C terminal domain H0N28_06415 PF00226 DnaJ domain H0N28_06420 PF00440 Bacterial regulatory proteins, tetR family H0N28_06430 PF00107 Zinc-binding dehydrogenase H0N28_06430 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_06430 PF13823 Alcohol dehydrogenase GroES-associated H0N28_06445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_06445 PF02785 Biotin carboxylase C-terminal domain H0N28_06445 PF00289 Biotin carboxylase, N-terminal domain H0N28_06450 PF02525 Flavodoxin-like fold H0N28_06455 PF01638 HxlR-like helix-turn-helix H0N28_06475 PF08753 NikR C terminal nickel binding domain H0N28_06475 PF01402 Ribbon-helix-helix protein, copG family H0N28_06480 PF01425 Amidase H0N28_06485 PF00497 Bacterial extracellular solute-binding proteins, family 3 H0N28_06490 PF00005 ABC transporter H0N28_06505 PF04717 Type VI secretion system, phage-baseplate injector H0N28_06505 PF13296 Putative type VI secretion system Rhs element Vgr H0N28_06505 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H0N28_06515 PF03781 Sulfatase-modifying factor enzyme 1 H0N28_06530 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H0N28_06545 PF05947 Type VI secretion system, TssF H0N28_06560 PF06744 Type VI secretion protein IcmF C-terminal H0N28_06560 PF06761 Intracellular multiplication and human macrophage-killing H0N28_06560 PF14331 ImcF-related N-terminal domain H0N28_06570 PF01389 OmpA-like transmembrane domain H0N28_06570 PF00691 OmpA family H0N28_06580 PF07724 AAA domain (Cdc48 subfamily) H0N28_06580 PF10431 C-terminal, D2-small domain, of ClpB protein H0N28_06580 PF17871 AAA lid domain H0N28_06580 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_06585 PF06812 ImpA, N-terminal, type VI secretion system H0N28_06590 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H0N28_06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06610 PF03466 LysR substrate binding domain H0N28_06620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H0N28_06625 PF07690 Major Facilitator Superfamily H0N28_06640 PF02677 Epoxyqueuosine reductase QueH H0N28_06650 PF00376 MerR family regulatory protein H0N28_06650 PF09278 MerR, DNA binding H0N28_06660 PF00701 Dihydrodipicolinate synthetase family H0N28_06670 PF00392 Bacterial regulatory proteins, gntR family H0N28_06675 PF05544 Proline racemase H0N28_06680 PF01266 FAD dependent oxidoreductase H0N28_06690 PF04324 BFD-like [2Fe-2S] binding domain H0N28_06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_06700 PF00083 Sugar (and other) transporter H0N28_06705 PF00171 Aldehyde dehydrogenase family H0N28_06710 PF13520 Amino acid permease H0N28_06715 PF03315 Serine dehydratase beta chain H0N28_06715 PF03313 Serine dehydratase alpha chain H0N28_06720 PF00171 Aldehyde dehydrogenase family H0N28_06720 PF01575 MaoC like domain H0N28_06725 PF05138 Phenylacetic acid catabolic protein H0N28_06730 PF06243 Phenylacetic acid degradation B H0N28_06735 PF05138 Phenylacetic acid catabolic protein H0N28_06740 PF01883 Iron-sulfur cluster assembly protein H0N28_06745 PF00175 Oxidoreductase NAD-binding domain H0N28_06745 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_06745 PF00970 Oxidoreductase FAD-binding domain H0N28_06750 PF00378 Enoyl-CoA hydratase/isomerase H0N28_06755 PF00378 Enoyl-CoA hydratase/isomerase H0N28_06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H0N28_06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H0N28_06760 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H0N28_06765 PF02803 Thiolase, C-terminal domain H0N28_06765 PF00108 Thiolase, N-terminal domain H0N28_06770 PF14535 AMP-binding enzyme C-terminal domain H0N28_06770 PF00501 AMP-binding enzyme H0N28_06775 PF08223 PaaX-like protein C-terminal domain H0N28_06775 PF07848 PaaX-like protein H0N28_06780 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_06785 PF03061 Thioesterase superfamily H0N28_06815 PF00199 Catalase H0N28_06820 PF01292 Prokaryotic cytochrome b561 H0N28_06825 PF03466 LysR substrate binding domain H0N28_06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06835 PF01614 Bacterial transcriptional regulator H0N28_06835 PF09339 IclR helix-turn-helix domain H0N28_06840 PF01494 FAD binding domain H0N28_06845 PF00842 Alanine racemase, C-terminal domain H0N28_06845 PF01168 Alanine racemase, N-terminal domain H0N28_06850 PF07702 UTRA domain H0N28_06850 PF00392 Bacterial regulatory proteins, gntR family H0N28_06860 PF08402 TOBE domain H0N28_06860 PF00005 ABC transporter H0N28_06865 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_06870 PF01266 FAD dependent oxidoreductase H0N28_06875 PF00266 Aminotransferase class-V H0N28_06880 PF13419 Haloacid dehalogenase-like hydrolase H0N28_06885 PF01810 LysE type translocator H0N28_06900 PF03466 LysR substrate binding domain H0N28_06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06905 PF00682 HMGL-like H0N28_06910 PF00289 Biotin carboxylase, N-terminal domain H0N28_06910 PF00364 Biotin-requiring enzyme H0N28_06910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_06910 PF02785 Biotin carboxylase C-terminal domain H0N28_06910 PF18140 Propionyl-coenzyme A carboxylase BT domain H0N28_06915 PF00378 Enoyl-CoA hydratase/isomerase H0N28_06920 PF01039 Carboxyl transferase domain H0N28_06925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_06925 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_06925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_06930 PF00440 Bacterial regulatory proteins, tetR family H0N28_06935 PF13193 AMP-binding enzyme C-terminal domain H0N28_06935 PF00501 AMP-binding enzyme H0N28_06955 PF03466 LysR substrate binding domain H0N28_06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_06990 PF02464 Competence-damaged protein H0N28_06990 PF18146 Damage-inducible protein CinA KH domain H0N28_06990 PF00994 Probable molybdopterin binding domain H0N28_07000 PF18011 C-terminal domain found in long catalases H0N28_07000 PF06628 Catalase-related immune-responsive H0N28_07000 PF00199 Catalase H0N28_07025 PF00717 Peptidase S24-like H0N28_07035 PF01037 Lrp/AsnC ligand binding domain H0N28_07035 PF13404 AsnC-type helix-turn-helix domain H0N28_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_07045 PF00072 Response regulator receiver domain H0N28_07045 PF00512 His Kinase A (phospho-acceptor) domain H0N28_07045 PF09308 LuxQ, periplasmic H0N28_07050 PF00072 Response regulator receiver domain H0N28_07065 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07070 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07075 PF00005 ABC transporter H0N28_07080 PF00497 Bacterial extracellular solute-binding proteins, family 3 H0N28_07085 PF00497 Bacterial extracellular solute-binding proteins, family 3 H0N28_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07095 PF03466 LysR substrate binding domain H0N28_07100 PF01810 LysE type translocator H0N28_07110 PF00266 Aminotransferase class-V H0N28_07120 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_07125 PF00581 Rhodanese-like domain H0N28_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07135 PF03466 LysR substrate binding domain H0N28_07140 PF02798 Glutathione S-transferase, N-terminal domain H0N28_07145 PF14834 Glutathione S-transferase, C-terminal domain H0N28_07145 PF02798 Glutathione S-transferase, N-terminal domain H0N28_07150 PF03466 LysR substrate binding domain H0N28_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07155 PF03788 LrgA family H0N28_07160 PF04172 LrgB-like family H0N28_07165 PF00392 Bacterial regulatory proteins, gntR family H0N28_07180 PF07690 Major Facilitator Superfamily H0N28_07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07190 PF03466 LysR substrate binding domain H0N28_07195 PF16957 Malonate decarboxylase, alpha subunit, transporter H0N28_07200 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase H0N28_07205 PF06857 Malonate decarboxylase delta subunit (MdcD) H0N28_07210 PF01039 Carboxyl transferase domain H0N28_07220 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG H0N28_07225 PF00698 Acyl transferase domain H0N28_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07240 PF03466 LysR substrate binding domain H0N28_07245 PF00155 Aminotransferase class I and II H0N28_07245 PF00392 Bacterial regulatory proteins, gntR family H0N28_07255 PF02322 Cytochrome bd terminal oxidase subunit II H0N28_07260 PF01654 Cytochrome bd terminal oxidase subunit I H0N28_07275 PF00296 Luciferase-like monooxygenase H0N28_07280 PF00083 Sugar (and other) transporter H0N28_07290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H0N28_07295 PF00005 ABC transporter H0N28_07300 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H0N28_07310 PF01177 Asp/Glu/Hydantoin racemase H0N28_07315 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H0N28_07325 PF03466 LysR substrate binding domain H0N28_07325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07335 PF13382 Adenine deaminase C-terminal domain H0N28_07335 PF01979 Amidohydrolase family H0N28_07345 PF03960 ArsC family H0N28_07350 PF01022 Bacterial regulatory protein, arsR family H0N28_07355 PF01758 Sodium Bile acid symporter family H0N28_07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07360 PF03466 LysR substrate binding domain H0N28_07375 PF13192 Thioredoxin domain H0N28_07375 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_07390 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_07395 PF00588 SpoU rRNA Methylase family H0N28_07400 PF14579 Helix-hairpin-helix motif H0N28_07400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H0N28_07400 PF01336 OB-fold nucleic acid binding domain H0N28_07400 PF07733 Bacterial DNA polymerase III alpha NTPase domain H0N28_07400 PF02811 PHP domain H0N28_07405 PF00710 Asparaginase, N-terminal H0N28_07405 PF17763 Glutaminase/Asparaginase C-terminal domain H0N28_07410 PF00375 Sodium:dicarboxylate symporter family H0N28_07415 PF00155 Aminotransferase class I and II H0N28_07420 PF01641 SelR domain H0N28_07425 PF00255 Glutathione peroxidase H0N28_07430 PF12833 Helix-turn-helix domain H0N28_07430 PF12852 Cupin H0N28_07440 PF00155 Aminotransferase class I and II H0N28_07445 PF01909 Nucleotidyltransferase domain H0N28_07445 PF01966 HD domain H0N28_07445 PF08335 GlnD PII-uridylyltransferase H0N28_07450 PF02222 ATP-grasp domain H0N28_07460 PF05437 Branched-chain amino acid transport protein (AzlD) H0N28_07465 PF03591 AzlC protein H0N28_07490 PF06071 Protein of unknown function (DUF933) H0N28_07490 PF01926 50S ribosome-binding GTPase H0N28_07495 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07500 PF09383 NIL domain H0N28_07500 PF00005 ABC transporter H0N28_07505 PF03180 NLPA lipoprotein H0N28_07510 PF03180 NLPA lipoprotein H0N28_07515 PF00296 Luciferase-like monooxygenase H0N28_07525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H0N28_07525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_07540 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07545 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_07550 PF00005 ABC transporter H0N28_07560 PF01037 Lrp/AsnC ligand binding domain H0N28_07565 PF01709 Transcriptional regulator H0N28_07575 PF00440 Bacterial regulatory proteins, tetR family H0N28_07595 PF03466 LysR substrate binding domain H0N28_07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_07605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H0N28_07615 PF00892 EamA-like transporter family H0N28_07635 PF00577 Outer membrane usher protein H0N28_07635 PF13954 PapC N-terminal domain H0N28_07635 PF13953 PapC C-terminal domain H0N28_07640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H0N28_07640 PF02753 Pili assembly chaperone PapD, C-terminal domain H0N28_07645 PF16970 Type-1 fimbrial protein, A H0N28_07660 PF06968 Biotin and Thiamin Synthesis associated domain H0N28_07660 PF04055 Radical SAM superfamily H0N28_07665 PF08331 Domain of unknown function (DUF1730) H0N28_07670 PF03853 YjeF-related protein N-terminus H0N28_07670 PF01256 Carbohydrate kinase H0N28_07675 PF02075 Crossover junction endodeoxyribonuclease RuvC H0N28_07690 PF00905 Penicillin binding protein transpeptidase domain H0N28_07710 PF00438 S-adenosylmethionine synthetase, N-terminal domain H0N28_07710 PF02772 S-adenosylmethionine synthetase, central domain H0N28_07710 PF02773 S-adenosylmethionine synthetase, C-terminal domain H0N28_07715 PF02780 Transketolase, C-terminal domain H0N28_07715 PF02779 Transketolase, pyrimidine binding domain H0N28_07715 PF00456 Transketolase, thiamine diphosphate binding domain H0N28_07725 PF04264 YceI-like domain H0N28_07735 PF09992 Phosphodiester glycosidase H0N28_07745 PF05958 tRNA (Uracil-5-)-methyltransferase H0N28_07750 PF04229 GrpB protein H0N28_07755 PF00171 Aldehyde dehydrogenase family H0N28_07755 PF01619 Proline dehydrogenase H0N28_07755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H0N28_07755 PF14850 DNA-binding domain of Proline dehydrogenase H0N28_07760 PF01037 Lrp/AsnC ligand binding domain H0N28_07765 PF00474 Sodium:solute symporter family H0N28_07770 PF02146 Sir2 family H0N28_07775 PF01597 Glycine cleavage H-protein H0N28_07780 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H0N28_07780 PF12833 Helix-turn-helix domain H0N28_07790 PF00664 ABC transporter transmembrane region H0N28_07790 PF00005 ABC transporter H0N28_07795 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H0N28_07800 PF06912 Protein of unknown function (DUF1275) H0N28_07805 PF00375 Sodium:dicarboxylate symporter family H0N28_07820 PF08007 Cupin superfamily protein H0N28_07825 PF02545 Maf-like protein H0N28_07835 PF00162 Phosphoglycerate kinase H0N28_07845 PF01116 Fructose-bisphosphate aldolase class-II H0N28_07850 PF09312 SurA N-terminal domain H0N28_07850 PF00639 PPIC-type PPIASE domain H0N28_07855 PF03968 OstA-like protein H0N28_07855 PF04453 LPS transport system D H0N28_07860 PF01636 Phosphotransferase enzyme family H0N28_07865 PF00483 Nucleotidyl transferase H0N28_07870 PF02527 rRNA small subunit methyltransferase G H0N28_07875 PF13614 AAA domain H0N28_07880 PF02195 ParB-like nuclease domain H0N28_07880 PF17762 HTH domain found in ParB protein H0N28_07885 PF01618 MotA/TolQ/ExbB proton channel family H0N28_07895 PF00005 ABC transporter H0N28_07895 PF00664 ABC transporter transmembrane region H0N28_07900 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H0N28_07905 PF02348 Cytidylyltransferase H0N28_07910 PF09115 DNA polymerase III, delta subunit, C terminal H0N28_07920 PF01026 TatD related DNase H0N28_07935 PF02501 Type II secretion system (T2SS), protein I H0N28_07935 PF07963 Prokaryotic N-terminal methylation motif H0N28_07940 PF07963 Prokaryotic N-terminal methylation motif H0N28_07940 PF11612 Type II secretion system (T2SS), protein J H0N28_07945 PF03934 Type II secretion system (T2SS), protein K H0N28_07955 PF03167 Uracil DNA glycosylase superfamily H0N28_07965 PF14437 MafB19-like deaminase H0N28_07975 PF02224 Cytidylate kinase H0N28_07980 PF00575 S1 RNA binding domain H0N28_07985 PF00216 Bacterial DNA-binding protein H0N28_07995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H0N28_08005 PF00743 Flavin-binding monooxygenase-like H0N28_08015 PF03969 AFG1-like ATPase H0N28_08020 PF00589 Phage integrase family H0N28_08020 PF02899 Phage integrase, N-terminal SAM-like domain H0N28_08085 PF03796 DnaB-like helicase C terminal domain H0N28_08085 PF00772 DnaB-like helicase N terminal domain H0N28_08175 PF04860 Phage portal protein H0N28_08280 PF01274 Malate synthase H0N28_08290 PF02472 Biopolymer transport protein ExbD/TolR H0N28_08295 PF02472 Biopolymer transport protein ExbD/TolR H0N28_08300 PF01618 MotA/TolQ/ExbB proton channel family H0N28_08310 PF07715 TonB-dependent Receptor Plug Domain H0N28_08310 PF00593 TonB dependent receptor H0N28_08330 PF01432 Peptidase family M3 H0N28_08335 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_08340 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_08345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H0N28_08345 PF00005 ABC transporter H0N28_08360 PF00459 Inositol monophosphatase family H0N28_08370 PF01649 Ribosomal protein S20 H0N28_08375 PF13460 NAD(P)H-binding H0N28_08380 PF03737 Aldolase/RraA H0N28_08400 PF00271 Helicase conserved C-terminal domain H0N28_08400 PF00270 DEAD/DEAH box helicase H0N28_08400 PF03461 TRCF domain H0N28_08400 PF17757 UvrB interaction domain H0N28_08400 PF02559 CarD-like/TRCF domain H0N28_08410 PF00211 Adenylate and Guanylate cyclase catalytic domain H0N28_08415 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_08420 PF00012 Hsp70 protein H0N28_08425 PF00226 DnaJ domain H0N28_08425 PF07743 HSCB C-terminal oligomerisation domain H0N28_08430 PF01521 Iron-sulphur cluster biosynthesis H0N28_08435 PF01592 NifU-like N terminal domain H0N28_08440 PF00266 Aminotransferase class-V H0N28_08445 PF02082 Transcriptional regulator H0N28_08460 PF00216 Bacterial DNA-binding protein H0N28_08470 PF12852 Cupin H0N28_08470 PF12833 Helix-turn-helix domain H0N28_08475 PF00487 Fatty acid desaturase H0N28_08480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_08480 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_08480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_08485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_08485 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_08485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_08490 PF03109 ABC1 family H0N28_08500 PF04073 Aminoacyl-tRNA editing domain H0N28_08505 PF06276 Ferric iron reductase FhuF-like transporter H0N28_08505 PF04183 IucA / IucC family H0N28_08510 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H0N28_08515 PF07690 Major Facilitator Superfamily H0N28_08520 PF06276 Ferric iron reductase FhuF-like transporter H0N28_08520 PF04183 IucA / IucC family H0N28_08525 PF04183 IucA / IucC family H0N28_08525 PF06276 Ferric iron reductase FhuF-like transporter H0N28_08535 PF03737 Aldolase/RraA H0N28_08540 PF00593 TonB dependent receptor H0N28_08540 PF07715 TonB-dependent Receptor Plug Domain H0N28_08565 PF13419 Haloacid dehalogenase-like hydrolase H0N28_08575 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H0N28_08580 PF02277 Phosphoribosyltransferase H0N28_08585 PF00300 Histidine phosphatase superfamily (branch 1) H0N28_08595 PF02654 Cobalamin-5-phosphate synthase H0N28_08600 PF00793 DAHP synthetase I family H0N28_08605 PF01925 Sulfite exporter TauE/SafE H0N28_08625 PF07715 TonB-dependent Receptor Plug Domain H0N28_08625 PF00593 TonB dependent receptor H0N28_08630 PF02684 Lipid-A-disaccharide synthetase H0N28_08640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_08645 PF00005 ABC transporter H0N28_08680 PF01230 HIT domain H0N28_08710 PF08241 Methyltransferase domain H0N28_08715 PF00561 alpha/beta hydrolase fold H0N28_08720 PF01053 Cys/Met metabolism PLP-dependent enzyme H0N28_08730 PF02575 YbaB/EbfC DNA-binding family H0N28_08735 PF13662 Toprim domain H0N28_08735 PF02132 RecR protein H0N28_08740 PF00570 HRDC domain H0N28_08740 PF01612 3'-5' exonuclease H0N28_08760 PF05166 YcgL domain H0N28_08770 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_08770 PF01434 Peptidase family M41 H0N28_08770 PF17862 AAA+ lid domain H0N28_08780 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_08785 PF05175 Methyltransferase small domain H0N28_08790 PF01264 Chorismate synthase H0N28_08795 PF08448 PAS fold H0N28_08795 PF00990 Diguanylate cyclase, GGDEF domain H0N28_08810 PF04055 Radical SAM superfamily H0N28_08815 PF00676 Dehydrogenase E1 component H0N28_08820 PF02779 Transketolase, pyrimidine binding domain H0N28_08820 PF02780 Transketolase, C-terminal domain H0N28_08825 PF00364 Biotin-requiring enzyme H0N28_08825 PF02817 e3 binding domain H0N28_08825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H0N28_08830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H0N28_08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_08835 PF00106 short chain dehydrogenase H0N28_08840 PF00107 Zinc-binding dehydrogenase H0N28_08840 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_08845 PF01062 Bestrophin, RFP-TM, chloride channel H0N28_08850 PF00072 Response regulator receiver domain H0N28_08850 PF00158 Sigma-54 interaction domain H0N28_08850 PF02954 Bacterial regulatory protein, Fis family H0N28_08855 PF04273 Putative phosphatase (DUF442) H0N28_08855 PF00753 Metallo-beta-lactamase superfamily H0N28_08860 PF00753 Metallo-beta-lactamase superfamily H0N28_08860 PF04273 Putative phosphatase (DUF442) H0N28_08880 PF12833 Helix-turn-helix domain H0N28_08880 PF06445 GyrI-like small molecule binding domain H0N28_08885 PF01638 HxlR-like helix-turn-helix H0N28_08890 PF02525 Flavodoxin-like fold H0N28_08895 PF02417 Chromate transporter H0N28_08900 PF00392 Bacterial regulatory proteins, gntR family H0N28_08900 PF07702 UTRA domain H0N28_08915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H0N28_08920 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_08925 PF00005 ABC transporter H0N28_08940 PF00083 Sugar (and other) transporter H0N28_08945 PF00593 TonB dependent receptor H0N28_08945 PF07715 TonB-dependent Receptor Plug Domain H0N28_08950 PF00206 Lyase H0N28_08950 PF10415 Fumarase C C-terminus H0N28_08965 PF03466 LysR substrate binding domain H0N28_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_08970 PF03466 LysR substrate binding domain H0N28_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_08975 PF00108 Thiolase, N-terminal domain H0N28_08975 PF02803 Thiolase, C-terminal domain H0N28_08980 PF02667 Short chain fatty acid transporter H0N28_08985 PF01144 Coenzyme A transferase H0N28_08990 PF01144 Coenzyme A transferase H0N28_08995 PF03466 LysR substrate binding domain H0N28_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09015 PF00440 Bacterial regulatory proteins, tetR family H0N28_09035 PF06719 AraC-type transcriptional regulator N-terminus H0N28_09035 PF12833 Helix-turn-helix domain H0N28_09040 PF07690 Major Facilitator Superfamily H0N28_09045 PF01738 Dienelactone hydrolase family H0N28_09060 PF01613 Flavin reductase like domain H0N28_09070 PF12833 Helix-turn-helix domain H0N28_09070 PF14525 AraC-binding-like domain H0N28_09090 PF00005 ABC transporter H0N28_09090 PF17755 UvrA DNA-binding domain H0N28_09090 PF17760 UvrA interaction domain H0N28_09095 PF00873 AcrB/AcrD/AcrF family H0N28_09100 PF00529 HlyD membrane-fusion protein of T1SS H0N28_09100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_09105 PF00072 Response regulator receiver domain H0N28_09105 PF00486 Transcriptional regulatory protein, C terminal H0N28_09110 PF00512 His Kinase A (phospho-acceptor) domain H0N28_09110 PF00672 HAMP domain H0N28_09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_09110 PF16527 Two-component sensor protein CpxA, periplasmic domain H0N28_09125 PF02311 AraC-like ligand binding domain H0N28_09125 PF12833 Helix-turn-helix domain H0N28_09130 PF12146 Serine aminopeptidase, S33 H0N28_09140 PF00106 short chain dehydrogenase H0N28_09165 PF13673 Acetyltransferase (GNAT) domain H0N28_09175 PF06114 IrrE N-terminal-like domain H0N28_09200 PF04607 Region found in RelA / SpoT proteins H0N28_09200 PF02824 TGS domain H0N28_09200 PF13291 ACT domain H0N28_09210 PF01975 Survival protein SurE H0N28_09235 PF07690 Major Facilitator Superfamily H0N28_09245 PF01425 Amidase H0N28_09250 PF03472 Autoinducer binding domain H0N28_09250 PF00196 Bacterial regulatory proteins, luxR family H0N28_09280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H0N28_09285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H0N28_09285 PF14572 Phosphoribosyl synthetase-associated domain H0N28_09305 PF00005 ABC transporter H0N28_09310 PF01032 FecCD transport family H0N28_09320 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_09320 PF00107 Zinc-binding dehydrogenase H0N28_09325 PF06719 AraC-type transcriptional regulator N-terminus H0N28_09325 PF12833 Helix-turn-helix domain H0N28_09330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H0N28_09330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H0N28_09335 PF07690 Major Facilitator Superfamily H0N28_09340 PF01370 NAD dependent epimerase/dehydratase family H0N28_09345 PF03466 LysR substrate binding domain H0N28_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09355 PF00920 Dehydratase family H0N28_09360 PF00171 Aldehyde dehydrogenase family H0N28_09375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_09375 PF00529 HlyD membrane-fusion protein of T1SS H0N28_09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09390 PF03466 LysR substrate binding domain H0N28_09400 PF08450 SMP-30/Gluconolactonase/LRE-like region H0N28_09405 PF07702 UTRA domain H0N28_09405 PF00392 Bacterial regulatory proteins, gntR family H0N28_09415 PF04909 Amidohydrolase H0N28_09420 PF07690 Major Facilitator Superfamily H0N28_09425 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) H0N28_09485 PF13193 AMP-binding enzyme C-terminal domain H0N28_09485 PF00501 AMP-binding enzyme H0N28_09495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_09495 PF12806 Acetyl-CoA dehydrogenase C-terminal like H0N28_09495 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_09495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_09500 PF01575 MaoC like domain H0N28_09505 PF00106 short chain dehydrogenase H0N28_09520 PF03466 LysR substrate binding domain H0N28_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09525 PF00440 Bacterial regulatory proteins, tetR family H0N28_09525 PF08359 YsiA-like protein, C-terminal region H0N28_09530 PF12706 Beta-lactamase superfamily domain H0N28_09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_09550 PF13411 MerR HTH family regulatory protein H0N28_09560 PF01872 RibD C-terminal domain H0N28_09565 PF00106 short chain dehydrogenase H0N28_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_09570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_09575 PF00561 alpha/beta hydrolase fold H0N28_09585 PF00171 Aldehyde dehydrogenase family H0N28_09595 PF07690 Major Facilitator Superfamily H0N28_09600 PF00920 Dehydratase family H0N28_09605 PF07729 FCD domain H0N28_09605 PF00392 Bacterial regulatory proteins, gntR family H0N28_09615 PF03466 LysR substrate binding domain H0N28_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H0N28_09620 PF13378 Enolase C-terminal domain-like H0N28_09625 PF02426 Muconolactone delta-isomerase H0N28_09630 PF04444 Catechol dioxygenase N terminus H0N28_09630 PF00775 Dioxygenase H0N28_09635 PF01144 Coenzyme A transferase H0N28_09640 PF01144 Coenzyme A transferase H0N28_09645 PF00108 Thiolase, N-terminal domain H0N28_09645 PF02803 Thiolase, C-terminal domain H0N28_09650 PF12146 Serine aminopeptidase, S33 H0N28_09655 PF01804 Penicillin amidase H0N28_09660 PF00171 Aldehyde dehydrogenase family H0N28_09675 PF12833 Helix-turn-helix domain H0N28_09675 PF02311 AraC-like ligand binding domain H0N28_09680 PF01613 Flavin reductase like domain H0N28_09685 PF00175 Oxidoreductase NAD-binding domain H0N28_09685 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_09700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H0N28_09700 PF00355 Rieske [2Fe-2S] domain H0N28_09715 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H0N28_09720 PF01425 Amidase H0N28_09730 PF07690 Major Facilitator Superfamily H0N28_09740 PF00106 short chain dehydrogenase H0N28_09755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_09755 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_09755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_09760 PF03466 LysR substrate binding domain H0N28_09765 PF09339 IclR helix-turn-helix domain H0N28_09765 PF01614 Bacterial transcriptional regulator H0N28_09770 PF00753 Metallo-beta-lactamase superfamily H0N28_09780 PF04143 Sulphur transport H0N28_09790 PF01011 PQQ enzyme repeat H0N28_09790 PF13360 PQQ-like domain H0N28_09795 PF04966 Carbohydrate-selective porin, OprB family H0N28_09800 PF05048 Periplasmic copper-binding protein (NosD) H0N28_09805 PF01487 Type I 3-dehydroquinase H0N28_09810 PF00775 Dioxygenase H0N28_09815 PF00775 Dioxygenase H0N28_09815 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal H0N28_09820 PF02627 Carboxymuconolactone decarboxylase family H0N28_09825 PF07690 Major Facilitator Superfamily H0N28_09830 PF00561 alpha/beta hydrolase fold H0N28_09835 PF00206 Lyase H0N28_09835 PF10397 Adenylosuccinate lyase C-terminus H0N28_09840 PF00108 Thiolase, N-terminal domain H0N28_09840 PF02803 Thiolase, C-terminal domain H0N28_09845 PF01144 Coenzyme A transferase H0N28_09850 PF01144 Coenzyme A transferase H0N28_09855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H0N28_09860 PF04977 Septum formation initiator H0N28_09865 PF04239 Protein of unknown function (DUF421) H0N28_09870 PF00113 Enolase, C-terminal TIM barrel domain H0N28_09870 PF03952 Enolase, N-terminal domain H0N28_09875 PF00793 DAHP synthetase I family H0N28_09880 PF06418 CTP synthase N-terminus H0N28_09880 PF00117 Glutamine amidotransferase class-I H0N28_09910 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_09910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_09925 PF00793 DAHP synthetase I family H0N28_09930 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H0N28_09935 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_09935 PF07724 AAA domain (Cdc48 subfamily) H0N28_09935 PF17871 AAA lid domain H0N28_09935 PF02861 Clp amino terminal domain, pathogenicity island component H0N28_09935 PF10431 C-terminal, D2-small domain, of ClpB protein H0N28_09940 PF02617 ATP-dependent Clp protease adaptor protein ClpS H0N28_09950 PF02774 Semialdehyde dehydrogenase, dimerisation domain H0N28_09950 PF01118 Semialdehyde dehydrogenase, NAD binding domain H0N28_09965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H0N28_09970 PF00585 C-terminal regulatory domain of Threonine dehydratase H0N28_09970 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_09975 PF02254 TrkA-N domain H0N28_09975 PF02080 TrkA-C domain H0N28_09980 PF02386 Cation transport protein H0N28_09985 PF02253 Phospholipase A1 H0N28_09995 PF07715 TonB-dependent Receptor Plug Domain H0N28_09995 PF00593 TonB dependent receptor H0N28_10000 PF00294 pfkB family carbohydrate kinase H0N28_10010 PF07290 Protein of unknown function (DUF1449) H0N28_10020 PF01654 Cytochrome bd terminal oxidase subunit I H0N28_10025 PF02322 Cytochrome bd terminal oxidase subunit II H0N28_10030 PF08173 Membrane bound YbgT-like protein H0N28_10045 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H0N28_10055 PF02881 SRP54-type protein, helical bundle domain H0N28_10055 PF00448 SRP54-type protein, GTPase domain H0N28_10080 PF00478 IMP dehydrogenase / GMP reductase domain H0N28_10080 PF00571 CBS domain H0N28_10085 PF00202 Aminotransferase class-III H0N28_10090 PF00462 Glutaredoxin H0N28_10100 PF03466 LysR substrate binding domain H0N28_10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_10105 PF00557 Metallopeptidase family M24 H0N28_10110 PF05525 Branched-chain amino acid transport protein H0N28_10135 PF02896 PEP-utilising enzyme, TIM barrel domain H0N28_10135 PF00381 PTS HPr component phosphorylation site H0N28_10135 PF05524 PEP-utilising enzyme, N-terminal H0N28_10135 PF00391 PEP-utilising enzyme, mobile domain H0N28_10135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H0N28_10140 PF00294 pfkB family carbohydrate kinase H0N28_10145 PF02378 Phosphotransferase system, EIIC H0N28_10145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H0N28_10160 PF00990 Diguanylate cyclase, GGDEF domain H0N28_10160 PF00563 EAL domain H0N28_10160 PF03707 Bacterial signalling protein N terminal repeat H0N28_10170 PF07995 Glucose / Sorbosone dehydrogenase H0N28_10175 PF02586 SOS response associated peptidase (SRAP) H0N28_10180 PF00916 Sulfate permease family H0N28_10180 PF01740 STAS domain H0N28_10185 PF00082 Subtilase family H0N28_10185 PF05922 Peptidase inhibitor I9 H0N28_10195 PF00324 Amino acid permease H0N28_10200 PF00266 Aminotransferase class-V H0N28_10205 PF01037 Lrp/AsnC ligand binding domain H0N28_10230 PF13419 Haloacid dehalogenase-like hydrolase H0N28_10235 PF01479 S4 domain H0N28_10240 PF00154 recA bacterial DNA recombination protein H0N28_10245 PF02631 RecX family H0N28_10260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H0N28_10260 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_10265 PF07977 FabA-like domain H0N28_10270 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_10270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H0N28_10280 PF07244 Surface antigen variable number repeat H0N28_10280 PF01103 Surface antigen H0N28_10285 PF13180 PDZ domain H0N28_10285 PF02163 Peptidase family M50 H0N28_10285 PF17820 PDZ domain H0N28_10290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H0N28_10290 PF13288 DXP reductoisomerase C-terminal domain H0N28_10290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H0N28_10300 PF01255 Putative undecaprenyl diphosphate synthase H0N28_10305 PF01765 Ribosome recycling factor H0N28_10310 PF00696 Amino acid kinase family H0N28_10315 PF04055 Radical SAM superfamily H0N28_10315 PF00919 Uncharacterized protein family UPF0004 H0N28_10315 PF18693 TRAM domain H0N28_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_10325 PF00512 His Kinase A (phospho-acceptor) domain H0N28_10325 PF00989 PAS fold H0N28_10330 PF02954 Bacterial regulatory protein, Fis family H0N28_10330 PF00072 Response regulator receiver domain H0N28_10330 PF00158 Sigma-54 interaction domain H0N28_10335 PF00440 Bacterial regulatory proteins, tetR family H0N28_10340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H0N28_10340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H0N28_10350 PF02542 YgbB family H0N28_10360 PF01266 FAD dependent oxidoreductase H0N28_10380 PF10415 Fumarase C C-terminus H0N28_10380 PF00206 Lyase H0N28_10385 PF16363 GDP-mannose 4,6 dehydratase H0N28_10390 PF02635 DsrE/DsrF-like family H0N28_10410 PF00892 EamA-like transporter family H0N28_10415 PF00155 Aminotransferase class I and II H0N28_10415 PF00392 Bacterial regulatory proteins, gntR family H0N28_10420 PF01638 HxlR-like helix-turn-helix H0N28_10425 PF03453 MoeA N-terminal region (domain I and II) H0N28_10425 PF03454 MoeA C-terminal region (domain IV) H0N28_10425 PF00994 Probable molybdopterin binding domain H0N28_10430 PF01967 MoaC family H0N28_10430 PF00994 Probable molybdopterin binding domain H0N28_10435 PF02391 MoaE protein H0N28_10445 PF04055 Radical SAM superfamily H0N28_10445 PF06463 Molybdenum Cofactor Synthesis C H0N28_10450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H0N28_10450 PF00384 Molybdopterin oxidoreductase H0N28_10450 PF01568 Molydopterin dinucleotide binding domain H0N28_10455 PF12804 MobA-like NTP transferase domain H0N28_10460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H0N28_10460 PF04324 BFD-like [2Fe-2S] binding domain H0N28_10460 PF00384 Molybdopterin oxidoreductase H0N28_10460 PF01568 Molydopterin dinucleotide binding domain H0N28_10465 PF04324 BFD-like [2Fe-2S] binding domain H0N28_10465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H0N28_10465 PF18267 Rubredoxin NAD+ reductase C-terminal domain H0N28_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_10465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H0N28_10470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H0N28_10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_10470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H0N28_10470 PF13806 Rieske-like [2Fe-2S] domain H0N28_10470 PF18267 Rubredoxin NAD+ reductase C-terminal domain H0N28_10470 PF04324 BFD-like [2Fe-2S] binding domain H0N28_10480 PF00072 Response regulator receiver domain H0N28_10480 PF00486 Transcriptional regulatory protein, C terminal H0N28_10485 PF00005 ABC transporter H0N28_10495 PF11799 impB/mucB/samB family C-terminal domain H0N28_10495 PF13438 Domain of unknown function (DUF4113) H0N28_10495 PF00817 impB/mucB/samB family H0N28_10500 PF01220 Dehydroquinase class II H0N28_10505 PF00364 Biotin-requiring enzyme H0N28_10510 PF02785 Biotin carboxylase C-terminal domain H0N28_10510 PF00289 Biotin carboxylase, N-terminal domain H0N28_10510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_10520 PF12832 MFS_1 like family H0N28_10535 PF11799 impB/mucB/samB family C-terminal domain H0N28_10535 PF00817 impB/mucB/samB family H0N28_10535 PF11798 IMS family HHH motif H0N28_10535 PF13438 Domain of unknown function (DUF4113) H0N28_10605 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system H0N28_10750 PF10548 P22AR C-terminal domain H0N28_10750 PF02498 BRO family, N-terminal domain H0N28_10790 PF00145 C-5 cytosine-specific DNA methylase H0N28_10895 PF01645 Conserved region in glutamate synthase H0N28_10910 PF01565 FAD binding domain H0N28_10910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H0N28_10915 PF01451 Low molecular weight phosphotyrosine protein phosphatase H0N28_10925 PF00465 Iron-containing alcohol dehydrogenase H0N28_10930 PF03061 Thioesterase superfamily H0N28_10935 PF04185 Phosphoesterase family H0N28_10935 PF05506 Domain of unknown function (DUF756) H0N28_10940 PF12170 DNA polymerase III tau subunit V interacting with alpha H0N28_10940 PF12169 DNA polymerase III subunits gamma and tau domain III H0N28_10940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H0N28_10945 PF07690 Major Facilitator Superfamily H0N28_10955 PF00144 Beta-lactamase H0N28_10960 PF01575 MaoC like domain H0N28_10970 PF00108 Thiolase, N-terminal domain H0N28_10970 PF02803 Thiolase, C-terminal domain H0N28_10980 PF03466 LysR substrate binding domain H0N28_10980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_10985 PF00923 Transaldolase/Fructose-6-phosphate aldolase H0N28_10990 PF01810 LysE type translocator H0N28_10995 PF01037 Lrp/AsnC ligand binding domain H0N28_11000 PF03594 Benzoate membrane transport protein H0N28_11005 PF02308 MgtC family H0N28_11010 PF00690 Cation transporter/ATPase, N-terminus H0N28_11010 PF00689 Cation transporting ATPase, C-terminus H0N28_11030 PF00582 Universal stress protein family H0N28_11035 PF12848 ABC transporter H0N28_11035 PF00005 ABC transporter H0N28_11055 PF00593 TonB dependent receptor H0N28_11055 PF07715 TonB-dependent Receptor Plug Domain H0N28_11085 PF00924 Mechanosensitive ion channel H0N28_11090 PF07715 TonB-dependent Receptor Plug Domain H0N28_11090 PF00593 TonB dependent receptor H0N28_11095 PF00440 Bacterial regulatory proteins, tetR family H0N28_11105 PF01037 Lrp/AsnC ligand binding domain H0N28_11110 PF01817 Chorismate mutase type II H0N28_11135 PF13954 PapC N-terminal domain H0N28_11135 PF13953 PapC C-terminal domain H0N28_11135 PF00577 Outer membrane usher protein H0N28_11150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H0N28_11150 PF11940 Domain of unknown function (DUF3458) Ig-like fold H0N28_11150 PF01433 Peptidase family M1 domain H0N28_11165 PF02110 Hydroxyethylthiazole kinase family H0N28_11175 PF14493 Helix-turn-helix domain H0N28_11175 PF05970 PIF1-like helicase H0N28_11180 PF00465 Iron-containing alcohol dehydrogenase H0N28_11195 PF00171 Aldehyde dehydrogenase family H0N28_11200 PF13520 Amino acid permease H0N28_11205 PF06751 Ethanolamine ammonia lyase large subunit (EutB) H0N28_11210 PF05985 Ethanolamine ammonia-lyase light chain (EutC) H0N28_11215 PF00958 GMP synthase C terminal domain H0N28_11215 PF02540 NAD synthase H0N28_11215 PF00117 Glutamine amidotransferase class-I H0N28_11220 PF00749 tRNA synthetases class I (E and Q), catalytic domain H0N28_11220 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H0N28_11225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H0N28_11230 PF00149 Calcineurin-like phosphoesterase H0N28_11240 PF00881 Nitroreductase family H0N28_11250 PF17209 Hfq protein H0N28_11260 PF01119 DNA mismatch repair protein, C-terminal domain H0N28_11260 PF08676 MutL C terminal dimerisation domain H0N28_11265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H0N28_11270 PF01479 S4 domain H0N28_11270 PF00849 RNA pseudouridylate synthase H0N28_11285 PF00849 RNA pseudouridylate synthase H0N28_11285 PF01479 S4 domain H0N28_11295 PF04284 Protein of unknown function (DUF441) H0N28_11300 PF03466 LysR substrate binding domain H0N28_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_11315 PF07690 Major Facilitator Superfamily H0N28_11320 PF00520 Ion transport protein H0N28_11320 PF00027 Cyclic nucleotide-binding domain H0N28_11330 PF00330 Aconitase family (aconitate hydratase) H0N28_11330 PF06434 Aconitate hydratase 2 N-terminus H0N28_11330 PF11791 Aconitate B N-terminal domain H0N28_11345 PF01103 Surface antigen H0N28_11345 PF07244 Surface antigen variable number repeat H0N28_11345 PF17243 POTRA domain TamA domain 1 H0N28_11350 PF07690 Major Facilitator Superfamily H0N28_11355 PF03232 Ubiquinone biosynthesis protein COQ7 H0N28_11365 PF00120 Glutamine synthetase, catalytic domain H0N28_11370 PF00072 Response regulator receiver domain H0N28_11370 PF00486 Transcriptional regulatory protein, C terminal H0N28_11375 PF00512 His Kinase A (phospho-acceptor) domain H0N28_11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_11375 PF13493 Domain of unknown function (DUF4118) H0N28_11375 PF02702 Osmosensitive K+ channel His kinase sensor domain H0N28_11380 PF02669 K+-transporting ATPase, c chain H0N28_11390 PF03814 Potassium-transporting ATPase A subunit H0N28_11400 PF02152 Dihydroneopterin aldolase H0N28_11405 PF03109 ABC1 family H0N28_11410 PF00899 ThiF family H0N28_11415 PF01613 Flavin reductase like domain H0N28_11420 PF00501 AMP-binding enzyme H0N28_11420 PF13193 AMP-binding enzyme C-terminal domain H0N28_11425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_11425 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_11425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_11430 PF00106 short chain dehydrogenase H0N28_11435 PF12833 Helix-turn-helix domain H0N28_11440 PF13847 Methyltransferase domain H0N28_11440 PF17827 PrmC N-terminal domain H0N28_11445 PF00472 RF-1 domain H0N28_11445 PF03462 PCRF domain H0N28_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_11455 PF03466 LysR substrate binding domain H0N28_11470 PF00296 Luciferase-like monooxygenase H0N28_11480 PF13994 PgaD-like protein H0N28_11485 PF00535 Glycosyl transferase family 2 H0N28_11490 PF14883 Hypothetical glycosyl hydrolase family 13 H0N28_11490 PF01522 Polysaccharide deacetylase H0N28_11500 PF03618 Kinase/pyrophosphorylase H0N28_11505 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H0N28_11505 PF02896 PEP-utilising enzyme, TIM barrel domain H0N28_11505 PF00391 PEP-utilising enzyme, mobile domain H0N28_11515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H0N28_11515 PF06481 COX Aromatic Rich Motif H0N28_11520 PF00115 Cytochrome C and Quinol oxidase polypeptide I H0N28_11525 PF00510 Cytochrome c oxidase subunit III H0N28_11530 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H0N28_11535 PF01040 UbiA prenyltransferase family H0N28_11540 PF01250 Ribosomal protein S6 H0N28_11545 PF01084 Ribosomal protein S18 H0N28_11550 PF03948 Ribosomal protein L9, C-terminal domain H0N28_11550 PF01281 Ribosomal protein L9, N-terminal domain H0N28_11555 PF00772 DnaB-like helicase N terminal domain H0N28_11555 PF03796 DnaB-like helicase C terminal domain H0N28_11560 PF01168 Alanine racemase, N-terminal domain H0N28_11560 PF00842 Alanine racemase, C-terminal domain H0N28_11570 PF01841 Transglutaminase-like superfamily H0N28_11570 PF08379 Bacterial transglutaminase-like N-terminal region H0N28_11580 PF14403 Circularly permuted ATP-grasp type 2 H0N28_11590 PF13932 GidA associated domain H0N28_11590 PF01134 Glucose inhibited division protein A H0N28_11610 PF02954 Bacterial regulatory protein, Fis family H0N28_11615 PF02142 MGS-like domain H0N28_11615 PF01808 AICARFT/IMPCHase bienzyme H0N28_11620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H0N28_11620 PF02843 Phosphoribosylglycinamide synthetase, C domain H0N28_11620 PF02844 Phosphoribosylglycinamide synthetase, N domain H0N28_11630 PF00005 ABC transporter H0N28_11630 PF09383 NIL domain H0N28_11635 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_11640 PF00753 Metallo-beta-lactamase superfamily H0N28_11640 PF16123 Hydroxyacylglutathione hydrolase C-terminus H0N28_11650 PF00375 Sodium:dicarboxylate symporter family H0N28_11670 PF07995 Glucose / Sorbosone dehydrogenase H0N28_11675 PF00892 EamA-like transporter family H0N28_11680 PF01177 Asp/Glu/Hydantoin racemase H0N28_11695 PF02470 MlaD protein H0N28_11700 PF04403 Paraquat-inducible protein A H0N28_11730 PF00293 NUDIX domain H0N28_11735 PF08946 Osmosensory transporter coiled coil H0N28_11735 PF00083 Sugar (and other) transporter H0N28_11785 PF00392 Bacterial regulatory proteins, gntR family H0N28_11785 PF07729 FCD domain H0N28_11795 PF03616 Sodium/glutamate symporter H0N28_11800 PF00561 alpha/beta hydrolase fold H0N28_11825 PF04076 Bacterial OB fold (BOF) protein H0N28_11855 PF00324 Amino acid permease H0N28_11860 PF00171 Aldehyde dehydrogenase family H0N28_11865 PF00202 Aminotransferase class-III H0N28_11870 PF03466 LysR substrate binding domain H0N28_11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_11895 PF03793 PASTA domain H0N28_11895 PF00069 Protein kinase domain H0N28_11915 PF00814 Glycoprotease family H0N28_11920 PF01165 Ribosomal protein S21 H0N28_11925 PF09424 Yqey-like protein H0N28_11930 PF01435 Peptidase family M48 H0N28_11935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H0N28_11935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H0N28_11950 PF00156 Phosphoribosyl transferase domain H0N28_11955 PF02674 Colicin V production protein H0N28_11960 PF01180 Dihydroorotate dehydrogenase H0N28_11980 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H0N28_11980 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H0N28_11985 PF00881 Nitroreductase family H0N28_11995 PF00271 Helicase conserved C-terminal domain H0N28_11995 PF00270 DEAD/DEAH box helicase H0N28_12000 PF00313 'Cold-shock' DNA-binding domain H0N28_12010 PF04545 Sigma-70, region 4 H0N28_12010 PF04542 Sigma-70 region 2 H0N28_12010 PF00140 Sigma-70 factor, region 1.2 H0N28_12015 PF04241 Protein of unknown function (DUF423) H0N28_12025 PF05690 Thiazole biosynthesis protein ThiG H0N28_12035 PF03883 Peroxide stress protein YaaA H0N28_12045 PF06956 Regulator of RNA terminal phosphate cyclase H0N28_12045 PF00158 Sigma-54 interaction domain H0N28_12050 PF00753 Metallo-beta-lactamase superfamily H0N28_12055 PF01139 tRNA-splicing ligase RtcB H0N28_12070 PF01137 RNA 3'-terminal phosphate cyclase H0N28_12070 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain H0N28_12075 PF01546 Peptidase family M20/M25/M40 H0N28_12075 PF07687 Peptidase dimerisation domain H0N28_12085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H0N28_12090 PF01842 ACT domain H0N28_12090 PF01817 Chorismate mutase type II H0N28_12090 PF00800 Prephenate dehydratase H0N28_12095 PF00756 Putative esterase H0N28_12100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_12100 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_12100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_12105 PF00375 Sodium:dicarboxylate symporter family H0N28_12110 PF02885 Glycosyl transferase family, helical bundle domain H0N28_12110 PF00591 Glycosyl transferase family, a/b domain H0N28_12115 PF07023 Protein of unknown function (DUF1315) H0N28_12120 PF01513 ATP-NAD kinase H0N28_12125 PF14814 Bifunctional transglycosylase second domain H0N28_12125 PF00912 Transglycosylase H0N28_12125 PF00905 Penicillin binding protein transpeptidase domain H0N28_12135 PF00293 NUDIX domain H0N28_12145 PF00512 His Kinase A (phospho-acceptor) domain H0N28_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_12145 PF08521 Two-component sensor kinase N-terminal H0N28_12150 PF00486 Transcriptional regulatory protein, C terminal H0N28_12150 PF00072 Response regulator receiver domain H0N28_12170 PF18389 TrmO C-terminal domain H0N28_12170 PF01980 tRNA-methyltransferase O H0N28_12175 PF00175 Oxidoreductase NAD-binding domain H0N28_12175 PF00970 Oxidoreductase FAD-binding domain H0N28_12180 PF02567 Phenazine biosynthesis-like protein H0N28_12185 PF00392 Bacterial regulatory proteins, gntR family H0N28_12185 PF00155 Aminotransferase class I and II H0N28_12190 PF01136 Peptidase family U32 H0N28_12190 PF16325 Peptidase family U32 C-terminal domain H0N28_12195 PF00037 4Fe-4S binding domain H0N28_12200 PF00893 Small Multidrug Resistance protein H0N28_12205 PF00005 ABC transporter H0N28_12210 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_12215 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_12220 PF00497 Bacterial extracellular solute-binding proteins, family 3 H0N28_12225 PF03466 LysR substrate binding domain H0N28_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_12230 PF13533 Biotin-lipoyl like H0N28_12235 PF00873 AcrB/AcrD/AcrF family H0N28_12240 PF02321 Outer membrane efflux protein H0N28_12245 PF00464 Serine hydroxymethyltransferase H0N28_12275 PF00005 ABC transporter H0N28_12280 PF01061 ABC-2 type transporter H0N28_12285 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H0N28_12285 PF14489 QueF-like protein H0N28_12295 PF01098 Cell cycle protein H0N28_12300 PF13406 Transglycosylase SLT domain H0N28_12305 PF05036 Sporulation related domain H0N28_12305 PF03330 Lytic transglycolase H0N28_12325 PF12833 Helix-turn-helix domain H0N28_12335 PF00889 Elongation factor TS H0N28_12340 PF00318 Ribosomal protein S2 H0N28_12345 PF00557 Metallopeptidase family M24 H0N28_12355 PF07690 Major Facilitator Superfamily H0N28_12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_12365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H0N28_12370 PF04055 Radical SAM superfamily H0N28_12375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_12375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_12375 PF09317 Domain of unknown function (DUF1974) H0N28_12390 PF05221 S-adenosyl-L-homocysteine hydrolase H0N28_12390 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H0N28_12395 PF02219 Methylenetetrahydrofolate reductase H0N28_12400 PF04452 RNA methyltransferase H0N28_12405 PF03707 Bacterial signalling protein N terminal repeat H0N28_12405 PF00563 EAL domain H0N28_12405 PF00990 Diguanylate cyclase, GGDEF domain H0N28_12410 PF00390 Malic enzyme, N-terminal domain H0N28_12410 PF01515 Phosphate acetyl/butaryl transferase H0N28_12410 PF03949 Malic enzyme, NAD binding domain H0N28_12415 PF01743 Poly A polymerase head domain H0N28_12415 PF12627 Probable RNA and SrmB- binding site of polymerase A H0N28_12420 PF13180 PDZ domain H0N28_12425 PF01784 NIF3 (NGG1p interacting factor 3) H0N28_12430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H0N28_12430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H0N28_12465 PF01040 UbiA prenyltransferase family H0N28_12470 PF04345 Chorismate lyase H0N28_12475 PF03951 Glutamine synthetase, beta-Grasp domain H0N28_12475 PF00120 Glutamine synthetase, catalytic domain H0N28_12480 PF00854 POT family H0N28_12490 PF00117 Glutamine amidotransferase class-I H0N28_12495 PF11838 ERAP1-like C-terminal domain H0N28_12495 PF01433 Peptidase family M1 domain H0N28_12500 PF07715 TonB-dependent Receptor Plug Domain H0N28_12500 PF00593 TonB dependent receptor H0N28_12505 PF02885 Glycosyl transferase family, helical bundle domain H0N28_12505 PF00591 Glycosyl transferase family, a/b domain H0N28_12510 PF00218 Indole-3-glycerol phosphate synthase H0N28_12525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H0N28_12525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H0N28_12530 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_12530 PF01799 [2Fe-2S] binding domain H0N28_12535 PF01227 GTP cyclohydrolase I H0N28_12540 PF00144 Beta-lactamase H0N28_12555 PF05675 Protein of unknown function (DUF817) H0N28_12560 PF01208 Uroporphyrinogen decarboxylase (URO-D) H0N28_12570 PF00425 chorismate binding enzyme H0N28_12580 PF00975 Thioesterase domain H0N28_12585 PF00005 ABC transporter H0N28_12590 PF00005 ABC transporter H0N28_12590 PF00664 ABC transporter transmembrane region H0N28_12595 PF00282 Pyridoxal-dependent decarboxylase conserved domain H0N28_12600 PF00857 Isochorismatase family H0N28_12600 PF00550 Phosphopantetheine attachment site H0N28_12605 PF00501 AMP-binding enzyme H0N28_12605 PF13193 AMP-binding enzyme C-terminal domain H0N28_12610 PF00550 Phosphopantetheine attachment site H0N28_12610 PF00668 Condensation domain H0N28_12610 PF00501 AMP-binding enzyme H0N28_12615 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H0N28_12620 PF07715 TonB-dependent Receptor Plug Domain H0N28_12620 PF00593 TonB dependent receptor H0N28_12625 PF01497 Periplasmic binding protein H0N28_12630 PF00005 ABC transporter H0N28_12635 PF01032 FecCD transport family H0N28_12640 PF01032 FecCD transport family H0N28_12645 PF00501 AMP-binding enzyme H0N28_12645 PF00550 Phosphopantetheine attachment site H0N28_12645 PF00975 Thioesterase domain H0N28_12645 PF00668 Condensation domain H0N28_12645 PF13193 AMP-binding enzyme C-terminal domain H0N28_12650 PF13193 AMP-binding enzyme C-terminal domain H0N28_12650 PF00668 Condensation domain H0N28_12650 PF00550 Phosphopantetheine attachment site H0N28_12650 PF00501 AMP-binding enzyme H0N28_12660 PF08348 YheO-like PAS domain H0N28_12660 PF13309 HTH domain H0N28_12665 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_12670 PF17954 Quercetinase C-terminal cupin domain H0N28_12670 PF02678 Pirin H0N28_12705 PF12833 Helix-turn-helix domain H0N28_12705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H0N28_12710 PF01370 NAD dependent epimerase/dehydratase family H0N28_12720 PF00561 alpha/beta hydrolase fold H0N28_12725 PF00743 Flavin-binding monooxygenase-like H0N28_12735 PF03466 LysR substrate binding domain H0N28_12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_12740 PF00857 Isochorismatase family H0N28_12780 PF04328 Selenoprotein, putative H0N28_12785 PF02554 Carbon starvation protein CstA H0N28_12785 PF13722 5TM C-terminal transporter carbon starvation CstA H0N28_12790 PF01132 Elongation factor P (EF-P) OB domain H0N28_12790 PF09285 Elongation factor P, C-terminal H0N28_12790 PF08207 Elongation factor P (EF-P) KOW-like domain H0N28_12795 PF04055 Radical SAM superfamily H0N28_12805 PF00563 EAL domain H0N28_12805 PF12792 CSS motif domain associated with EAL H0N28_12810 PF01197 Ribosomal protein L31 H0N28_12815 PF13593 SBF-like CPA transporter family (DUF4137) H0N28_12820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H0N28_12825 PF07690 Major Facilitator Superfamily H0N28_12830 PF13654 AAA domain H0N28_12830 PF05362 Lon protease (S16) C-terminal proteolytic domain H0N28_12835 PF03466 LysR substrate binding domain H0N28_12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_12840 PF01551 Peptidase family M23 H0N28_12840 PF01476 LysM domain H0N28_12845 PF01975 Survival protein SurE H0N28_12860 PF07943 Penicillin-binding protein 5, C-terminal domain H0N28_12860 PF00768 D-alanyl-D-alanine carboxypeptidase H0N28_12865 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_12880 PF04356 Protein of unknown function (DUF489) H0N28_12885 PF00206 Lyase H0N28_12885 PF08328 Adenylosuccinate lyase C-terminal H0N28_12900 PF01343 Peptidase family S49 H0N28_12900 PF08496 Peptidase family S49 N-terminal H0N28_12905 PF00005 ABC transporter H0N28_12910 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_12915 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_12920 PF12849 PBP superfamily domain H0N28_12925 PF00324 Amino acid permease H0N28_12930 PF00205 Thiamine pyrophosphate enzyme, central domain H0N28_12930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H0N28_12930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H0N28_12935 PF01037 Lrp/AsnC ligand binding domain H0N28_12940 PF00171 Aldehyde dehydrogenase family H0N28_12945 PF00282 Pyridoxal-dependent decarboxylase conserved domain H0N28_12950 PF00202 Aminotransferase class-III H0N28_12965 PF02525 Flavodoxin-like fold H0N28_12970 PF00487 Fatty acid desaturase H0N28_12975 PF00970 Oxidoreductase FAD-binding domain H0N28_12975 PF00111 2Fe-2S iron-sulfur cluster binding domain H0N28_12975 PF00175 Oxidoreductase NAD-binding domain H0N28_12980 PF00440 Bacterial regulatory proteins, tetR family H0N28_12990 PF18337 RapA N-terminal Tudor like domain H0N28_12990 PF00271 Helicase conserved C-terminal domain H0N28_12990 PF12137 RNA polymerase recycling family C-terminal H0N28_12990 PF18339 RapA N-terminal Tudor like domain 1 H0N28_12990 PF00176 SNF2 family N-terminal domain H0N28_12995 PF00849 RNA pseudouridylate synthase H0N28_13005 PF00202 Aminotransferase class-III H0N28_13010 PF02581 Thiamine monophosphate synthase H0N28_13035 PF00675 Insulinase (Peptidase family M16) H0N28_13035 PF05193 Peptidase M16 inactive domain H0N28_13040 PF02567 Phenazine biosynthesis-like protein H0N28_13045 PF00375 Sodium:dicarboxylate symporter family H0N28_13050 PF03466 LysR substrate binding domain H0N28_13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_13055 PF06779 Uncharacterised MFS-type transporter YbfB H0N28_13075 PF00180 Isocitrate/isopropylmalate dehydrogenase H0N28_13080 PF00849 RNA pseudouridylate synthase H0N28_13085 PF03971 Monomeric isocitrate dehydrogenase H0N28_13095 PF07943 Penicillin-binding protein 5, C-terminal domain H0N28_13095 PF00768 D-alanyl-D-alanine carboxypeptidase H0N28_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_13105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_13110 PF00875 DNA photolyase H0N28_13110 PF03441 FAD binding domain of DNA photolyase H0N28_13155 PF03060 Nitronate monooxygenase H0N28_13160 PF01207 Dihydrouridine synthase (Dus) H0N28_13165 PF07759 Protein of unknown function (DUF1615) H0N28_13175 PF01472 PUA domain H0N28_13175 PF00696 Amino acid kinase family H0N28_13180 PF01926 50S ribosome-binding GTPase H0N28_13180 PF01018 GTP1/OBG H0N28_13195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H0N28_13195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H0N28_13200 PF00892 EamA-like transporter family H0N28_13210 PF17757 UvrB interaction domain H0N28_13210 PF12344 Ultra-violet resistance protein B H0N28_13210 PF02151 UvrB/uvrC motif H0N28_13210 PF04851 Type III restriction enzyme, res subunit H0N28_13210 PF00271 Helicase conserved C-terminal domain H0N28_13220 PF00990 Diguanylate cyclase, GGDEF domain H0N28_13220 PF17151 Periplasmic sensor domain H0N28_13230 PF00155 Aminotransferase class I and II H0N28_13240 PF00012 Hsp70 protein H0N28_13270 PF00106 short chain dehydrogenase H0N28_13275 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H0N28_13280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H0N28_13285 PF02565 Recombination protein O C terminal H0N28_13285 PF11967 Recombination protein O N terminal H0N28_13295 PF07650 KH domain H0N28_13295 PF01926 50S ribosome-binding GTPase H0N28_13300 PF14622 Ribonuclease-III-like H0N28_13300 PF00035 Double-stranded RNA binding motif H0N28_13310 PF10502 Signal peptidase, peptidase S26 H0N28_13315 PF06421 GTP-binding protein LepA C-terminus H0N28_13315 PF00679 Elongation factor G C-terminus H0N28_13315 PF00009 Elongation factor Tu GTP binding domain H0N28_13315 PF03144 Elongation factor Tu domain 2 H0N28_13320 PF13302 Acetyltransferase (GNAT) domain H0N28_13330 PF13180 PDZ domain H0N28_13335 PF00890 FAD binding domain H0N28_13335 PF02910 Fumarate reductase flavoprotein C-term H0N28_13345 PF02223 Thymidylate kinase H0N28_13350 PF02618 YceG-like family H0N28_13355 PF01063 Amino-transferase class IV H0N28_13370 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_13375 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_13380 PF12857 TOBE-like domain H0N28_13380 PF00005 ABC transporter H0N28_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_13385 PF03466 LysR substrate binding domain H0N28_13395 PF14602 Hexapeptide repeat of succinyl-transferase H0N28_13395 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_13395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H0N28_13405 PF06508 Queuosine biosynthesis protein QueC H0N28_13420 PF00578 AhpC/TSA family H0N28_13430 PF01467 Cytidylyltransferase-like H0N28_13430 PF00293 NUDIX domain H0N28_13435 PF00378 Enoyl-CoA hydratase/isomerase H0N28_13440 PF01784 NIF3 (NGG1p interacting factor 3) H0N28_13450 PF08722 TnsA endonuclease N terminal H0N28_13450 PF08721 TnsA endonuclease C terminal H0N28_13455 PF00665 Integrase core domain H0N28_13460 PF13401 AAA domain H0N28_13460 PF11426 Tn7 transposition regulator TnsC H0N28_13470 PF13737 Transposase DDE domain H0N28_13510 PF00664 ABC transporter transmembrane region H0N28_13510 PF00005 ABC transporter H0N28_13510 PF03412 Peptidase C39 family H0N28_13515 PF01554 MatE H0N28_13530 PF07715 TonB-dependent Receptor Plug Domain H0N28_13530 PF00593 TonB dependent receptor H0N28_13535 PF00975 Thioesterase domain H0N28_13540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain H0N28_13540 PF01648 4'-phosphopantetheinyl transferase superfamily H0N28_13555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H0N28_13555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H0N28_13560 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H0N28_13565 PF13193 AMP-binding enzyme C-terminal domain H0N28_13565 PF00501 AMP-binding enzyme H0N28_13570 PF13193 AMP-binding enzyme C-terminal domain H0N28_13570 PF00668 Condensation domain H0N28_13570 PF00501 AMP-binding enzyme H0N28_13570 PF00975 Thioesterase domain H0N28_13570 PF00550 Phosphopantetheine attachment site H0N28_13575 PF00501 AMP-binding enzyme H0N28_13575 PF08242 Methyltransferase domain H0N28_13575 PF00550 Phosphopantetheine attachment site H0N28_13575 PF00668 Condensation domain H0N28_13580 PF00550 Phosphopantetheine attachment site H0N28_13580 PF00668 Condensation domain H0N28_13580 PF00501 AMP-binding enzyme H0N28_13585 PF00106 short chain dehydrogenase H0N28_13590 PF00857 Isochorismatase family H0N28_13590 PF00550 Phosphopantetheine attachment site H0N28_13595 PF00425 chorismate binding enzyme H0N28_13620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H0N28_13620 PF02769 AIR synthase related protein, C-terminal domain H0N28_13620 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H0N28_13625 PF01966 HD domain H0N28_13630 PF07499 RuvA, C-terminal domain H0N28_13630 PF01330 RuvA N terminal domain H0N28_13635 PF05496 Holliday junction DNA helicase RuvB P-loop domain H0N28_13635 PF17864 RuvB AAA lid domain H0N28_13635 PF05491 RuvB C-terminal winged helix domain H0N28_13640 PF01546 Peptidase family M20/M25/M40 H0N28_13640 PF07687 Peptidase dimerisation domain H0N28_13645 PF03061 Thioesterase superfamily H0N28_13650 PF01618 MotA/TolQ/ExbB proton channel family H0N28_13655 PF02472 Biopolymer transport protein ExbD/TolR H0N28_13665 PF04052 TolB amino-terminal domain H0N28_13665 PF07676 WD40-like Beta Propeller Repeat H0N28_13670 PF00691 OmpA family H0N28_13680 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H0N28_13685 PF00588 SpoU rRNA Methylase family H0N28_13685 PF08032 RNA 2'-O ribose methyltransferase substrate binding H0N28_13715 PF11638 DnaA N-terminal domain H0N28_13715 PF08299 Bacterial dnaA protein helix-turn-helix H0N28_13715 PF00308 Bacterial dnaA protein H0N28_13720 PF01594 AI-2E family transporter H0N28_13725 PF02769 AIR synthase related protein, C-terminal domain H0N28_13725 PF00586 AIR synthase related protein, N-terminal domain H0N28_13730 PF00551 Formyl transferase H0N28_13735 PF12697 Alpha/beta hydrolase family H0N28_13740 PF06965 Na+/H+ antiporter 1 H0N28_13740 PF01343 Peptidase family S49 H0N28_13750 PF00753 Metallo-beta-lactamase superfamily H0N28_13750 PF13567 Domain of unknown function (DUF4131) H0N28_13750 PF03772 Competence protein H0N28_13755 PF00005 ABC transporter H0N28_13760 PF12704 MacB-like periplasmic core domain H0N28_13760 PF02687 FtsX-like permease family H0N28_13770 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H0N28_13785 PF00266 Aminotransferase class-V H0N28_13795 PF13533 Biotin-lipoyl like H0N28_13815 PF00535 Glycosyl transferase family 2 H0N28_13830 PF00521 DNA gyrase/topoisomerase IV, subunit A H0N28_13830 PF03989 DNA gyrase C-terminal domain, beta-propeller H0N28_13835 PF01012 Electron transfer flavoprotein domain H0N28_13835 PF00766 Electron transfer flavoprotein FAD-binding domain H0N28_13840 PF01012 Electron transfer flavoprotein domain H0N28_13845 PF02899 Phage integrase, N-terminal SAM-like domain H0N28_13845 PF00589 Phage integrase family H0N28_13850 PF01810 LysE type translocator H0N28_13855 PF01678 Diaminopimelate epimerase H0N28_13860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H0N28_13860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H0N28_13870 PF00324 Amino acid permease H0N28_13875 PF18073 Rubredoxin metal binding domain H0N28_13885 PF00152 tRNA synthetases class II (D, K and N) H0N28_13890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H0N28_13890 PF11890 Domain of unknown function (DUF3410) H0N28_13890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H0N28_13895 PF06803 Protein of unknown function (DUF1232) H0N28_13900 PF02634 FdhD/NarQ family H0N28_13905 PF00384 Molybdopterin oxidoreductase H0N28_13910 PF02595 Glycerate kinase family H0N28_13925 PF00881 Nitroreductase family H0N28_13980 PF09857 Putative toxin of bacterial toxin-antitoxin pair H0N28_13990 PF00550 Phosphopantetheine attachment site H0N28_13990 PF00975 Thioesterase domain H0N28_13990 PF00668 Condensation domain H0N28_13990 PF13193 AMP-binding enzyme C-terminal domain H0N28_13990 PF00501 AMP-binding enzyme H0N28_14005 PF01272 Transcription elongation factor, GreA/GreB, C-term H0N28_14005 PF03449 Transcription elongation factor, N-terminal H0N28_14010 PF00497 Bacterial extracellular solute-binding proteins, family 3 H0N28_14010 PF01464 Transglycosylase SLT domain H0N28_14020 PF01171 PP-loop family H0N28_14025 PF01464 Transglycosylase SLT domain H0N28_14030 PF01435 Peptidase family M48 H0N28_14040 PF00873 AcrB/AcrD/AcrF family H0N28_14045 PF03009 Glycerophosphoryl diester phosphodiesterase family H0N28_14050 PF00753 Metallo-beta-lactamase superfamily H0N28_14055 PF01219 Prokaryotic diacylglycerol kinase H0N28_14060 PF00118 TCP-1/cpn60 chaperonin family H0N28_14065 PF00166 Chaperonin 10 Kd subunit H0N28_14070 PF00149 Calcineurin-like phosphoesterase H0N28_14075 PF00781 Diacylglycerol kinase catalytic domain H0N28_14080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H0N28_14080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H0N28_14085 PF01266 FAD dependent oxidoreductase H0N28_14085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H0N28_14090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H0N28_14090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H0N28_14095 PF00083 Sugar (and other) transporter H0N28_14110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H0N28_14110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H0N28_14125 PF09423 PhoD-like phosphatase H0N28_14125 PF16655 PhoD-like phosphatase, N-terminal domain H0N28_14145 PF00809 Pterin binding enzyme H0N28_14150 PF17862 AAA+ lid domain H0N28_14150 PF06480 FtsH Extracellular H0N28_14150 PF01434 Peptidase family M41 H0N28_14150 PF00004 ATPase family associated with various cellular activities (AAA) H0N28_14155 PF01728 FtsJ-like methyltransferase H0N28_14160 PF01985 CRS1 / YhbY (CRM) domain H0N28_14175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H0N28_14175 PF00117 Glutamine amidotransferase class-I H0N28_14180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_14180 PF02142 MGS-like domain H0N28_14180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H0N28_14185 PF01272 Transcription elongation factor, GreA/GreB, C-term H0N28_14185 PF03449 Transcription elongation factor, N-terminal H0N28_14190 PF00440 Bacterial regulatory proteins, tetR family H0N28_14195 PF01042 Endoribonuclease L-PSP H0N28_14200 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_14205 PF00582 Universal stress protein family H0N28_14210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H0N28_14220 PF09587 Bacterial capsule synthesis protein PGA_cap H0N28_14235 PF00999 Sodium/hydrogen exchanger family H0N28_14240 PF04228 Putative neutral zinc metallopeptidase H0N28_14245 PF05661 Protein of unknown function (DUF808) H0N28_14250 PF00579 tRNA synthetases class I (W and Y) H0N28_14255 PF02629 CoA binding domain H0N28_14255 PF00549 CoA-ligase H0N28_14260 PF00549 CoA-ligase H0N28_14260 PF08442 ATP-grasp domain H0N28_14265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H0N28_14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_14270 PF02817 e3 binding domain H0N28_14270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H0N28_14270 PF00364 Biotin-requiring enzyme H0N28_14275 PF02779 Transketolase, pyrimidine binding domain H0N28_14275 PF16078 2-oxoglutarate dehydrogenase N-terminus H0N28_14275 PF00676 Dehydrogenase E1 component H0N28_14275 PF16870 2-oxoglutarate dehydrogenase C-terminal H0N28_14290 PF13085 2Fe-2S iron-sulfur cluster binding domain H0N28_14295 PF00890 FAD binding domain H0N28_14295 PF02910 Fumarate reductase flavoprotein C-term H0N28_14300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H0N28_14305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H0N28_14310 PF00285 Citrate synthase, C-terminal domain H0N28_14320 PF17773 UPF0176 acylphosphatase like domain H0N28_14320 PF00581 Rhodanese-like domain H0N28_14340 PF03979 Sigma-70 factor, region 1.1 H0N28_14340 PF00140 Sigma-70 factor, region 1.2 H0N28_14340 PF04539 Sigma-70 region 3 H0N28_14340 PF04542 Sigma-70 region 2 H0N28_14340 PF04545 Sigma-70, region 4 H0N28_14340 PF04546 Sigma-70, non-essential region H0N28_14345 PF04359 Protein of unknown function (DUF493) H0N28_14350 PF03099 Biotin/lipoate A/B protein ligase family H0N28_14360 PF00465 Iron-containing alcohol dehydrogenase H0N28_14365 PF13520 Amino acid permease H0N28_14370 PF03358 NADPH-dependent FMN reductase H0N28_14375 PF01638 HxlR-like helix-turn-helix H0N28_14380 PF00588 SpoU rRNA Methylase family H0N28_14385 PF10414 Sirohaem synthase dimerisation region H0N28_14385 PF14824 Sirohaem biosynthesis protein central H0N28_14385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H0N28_14390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H0N28_14390 PF02403 Seryl-tRNA synthetase N-terminal domain H0N28_14400 PF03548 Outer membrane lipoprotein carrier protein LolA H0N28_14405 PF01016 Ribosomal L27 protein H0N28_14410 PF00829 Ribosomal prokaryotic L21 protein H0N28_14420 PF00348 Polyprenyl synthetase H0N28_14430 PF01569 PAP2 superfamily H0N28_14435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_14435 PF00529 HlyD membrane-fusion protein of T1SS H0N28_14440 PF00873 AcrB/AcrD/AcrF family H0N28_14445 PF02321 Outer membrane efflux protein H0N28_14450 PF01906 Putative heavy-metal-binding H0N28_14455 PF01906 Putative heavy-metal-binding H0N28_14475 PF10458 Valyl tRNA synthetase tRNA binding arm H0N28_14475 PF00133 tRNA synthetases class I (I, L, M and V) H0N28_14475 PF08264 Anticodon-binding domain of tRNA H0N28_14495 PF03466 LysR substrate binding domain H0N28_14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_14500 PF00909 Ammonium Transporter Family H0N28_14510 PF08521 Two-component sensor kinase N-terminal H0N28_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_14510 PF00512 His Kinase A (phospho-acceptor) domain H0N28_14515 PF00072 Response regulator receiver domain H0N28_14515 PF00486 Transcriptional regulatory protein, C terminal H0N28_14520 PF00884 Sulfatase H0N28_14520 PF08019 Phosphoethanolamine transferase EptA/EptB H0N28_14540 PF01734 Patatin-like phospholipase H0N28_14550 PF01145 SPFH domain / Band 7 family H0N28_14555 PF04237 YjbR H0N28_14560 PF00348 Polyprenyl synthetase H0N28_14565 PF04303 PrpF protein H0N28_14570 PF00324 Amino acid permease H0N28_14580 PF01965 DJ-1/PfpI family H0N28_14585 PF14765 Polyketide synthase dehydratase H0N28_14585 PF08990 Erythronolide synthase docking H0N28_14585 PF16197 Ketoacyl-synthetase C-terminal extension H0N28_14585 PF00109 Beta-ketoacyl synthase, N-terminal domain H0N28_14585 PF02801 Beta-ketoacyl synthase, C-terminal domain H0N28_14585 PF09277 Erythronolide synthase, docking H0N28_14585 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_14585 PF08659 KR domain H0N28_14585 PF00698 Acyl transferase domain H0N28_14585 PF00550 Phosphopantetheine attachment site H0N28_14590 PF06719 AraC-type transcriptional regulator N-terminus H0N28_14590 PF12833 Helix-turn-helix domain H0N28_14595 PF02673 Bacitracin resistance protein BacA H0N28_14615 PF02525 Flavodoxin-like fold H0N28_14630 PF01507 Phosphoadenosine phosphosulfate reductase family H0N28_14635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain H0N28_14635 PF06974 Protein of unknown function (DUF1298) H0N28_14645 PF00575 S1 RNA binding domain H0N28_14645 PF10150 Ribonuclease E/G family H0N28_14650 PF02545 Maf-like protein H0N28_14655 PF04093 rod shape-determining protein MreD H0N28_14660 PF04085 rod shape-determining protein MreC H0N28_14670 PF02686 Glu-tRNAGln amidotransferase C subunit H0N28_14675 PF01425 Amidase H0N28_14680 PF02637 GatB domain H0N28_14680 PF02934 GatB/GatE catalytic domain H0N28_14705 PF01431 Peptidase family M13 H0N28_14705 PF05649 Peptidase family M13 H0N28_14710 PF05992 SbmA/BacA-like family H0N28_14715 PF13291 ACT domain H0N28_14715 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_14720 PF01734 Patatin-like phospholipase H0N28_14725 PF01235 Sodium:alanine symporter family H0N28_14740 PF00881 Nitroreductase family H0N28_14745 PF07690 Major Facilitator Superfamily H0N28_14750 PF12805 FUSC-like inner membrane protein yccS H0N28_14760 PF00667 FAD binding domain H0N28_14760 PF00258 Flavodoxin H0N28_14760 PF00175 Oxidoreductase NAD-binding domain H0N28_14800 PF17969 L,D-transpeptidase C-terminal domain H0N28_14800 PF03734 L,D-transpeptidase catalytic domain H0N28_14805 PF04304 Protein of unknown function (DUF454) H0N28_14815 PF08085 Entericidin EcnA/B family H0N28_14820 PF07687 Peptidase dimerisation domain H0N28_14820 PF01546 Peptidase family M20/M25/M40 H0N28_14830 PF01584 CheW-like domain H0N28_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_14830 PF00072 Response regulator receiver domain H0N28_14830 PF01627 Hpt domain H0N28_14835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H0N28_14835 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H0N28_14840 PF01584 CheW-like domain H0N28_14845 PF00072 Response regulator receiver domain H0N28_14850 PF00072 Response regulator receiver domain H0N28_14865 PF00873 AcrB/AcrD/AcrF family H0N28_14870 PF03129 Anticodon binding domain H0N28_14870 PF04073 Aminoacyl-tRNA editing domain H0N28_14870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H0N28_14875 PF07411 Domain of unknown function (DUF1508) H0N28_14880 PF08274 PhnA Zinc-Ribbon H0N28_14880 PF03831 PhnA domain H0N28_14885 PF04343 Protein of unknown function, DUF488 H0N28_14895 PF01571 Aminomethyltransferase folate-binding domain H0N28_14900 PF10411 Disulfide bond isomerase protein N-terminus H0N28_14900 PF13098 Thioredoxin-like domain H0N28_14910 PF03547 Membrane transport protein H0N28_14915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_14920 PF07715 TonB-dependent Receptor Plug Domain H0N28_14920 PF00593 TonB dependent receptor H0N28_14925 PF02245 Methylpurine-DNA glycosylase (MPG) H0N28_14930 PF06827 Zinc finger found in FPG and IleRS H0N28_14930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H0N28_14930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H0N28_14945 PF01741 Large-conductance mechanosensitive channel, MscL H0N28_14950 PF00679 Elongation factor G C-terminus H0N28_14950 PF03144 Elongation factor Tu domain 2 H0N28_14950 PF00009 Elongation factor Tu GTP binding domain H0N28_14955 PF00860 Permease family H0N28_14960 PF05175 Methyltransferase small domain H0N28_14960 PF08468 Methyltransferase small domain N-terminal H0N28_14965 PF00324 Amino acid permease H0N28_14970 PF01139 tRNA-splicing ligase RtcB H0N28_14980 PF13505 Outer membrane protein beta-barrel domain H0N28_14980 PF00691 OmpA family H0N28_14990 PF00108 Thiolase, N-terminal domain H0N28_14990 PF02803 Thiolase, C-terminal domain H0N28_15000 PF00893 Small Multidrug Resistance protein H0N28_15010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H0N28_15010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H0N28_15015 PF01011 PQQ enzyme repeat H0N28_15020 PF04966 Carbohydrate-selective porin, OprB family H0N28_15025 PF02515 CoA-transferase family III H0N28_15030 PF02311 AraC-like ligand binding domain H0N28_15030 PF12833 Helix-turn-helix domain H0N28_15035 PF02803 Thiolase, C-terminal domain H0N28_15035 PF00108 Thiolase, N-terminal domain H0N28_15040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H0N28_15040 PF00378 Enoyl-CoA hydratase/isomerase H0N28_15040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H0N28_15055 PF13673 Acetyltransferase (GNAT) domain H0N28_15065 PF03006 Haemolysin-III related H0N28_15070 PF07690 Major Facilitator Superfamily H0N28_15070 PF00083 Sugar (and other) transporter H0N28_15080 PF07516 SecA Wing and Scaffold domain H0N28_15080 PF01043 SecA preprotein cross-linking domain H0N28_15080 PF07517 SecA DEAD-like domain H0N28_15080 PF02810 SEC-C motif H0N28_15085 PF00578 AhpC/TSA family H0N28_15085 PF10417 C-terminal domain of 1-Cys peroxiredoxin H0N28_15090 PF00753 Metallo-beta-lactamase superfamily H0N28_15105 PF02875 Mur ligase family, glutamate ligase domain H0N28_15105 PF08245 Mur ligase middle domain H0N28_15110 PF01039 Carboxyl transferase domain H0N28_15115 PF00290 Tryptophan synthase alpha chain H0N28_15140 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_15145 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H0N28_15150 PF00593 TonB dependent receptor H0N28_15150 PF07715 TonB-dependent Receptor Plug Domain H0N28_15155 PF01923 Cobalamin adenosyltransferase H0N28_15175 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H0N28_15180 PF00072 Response regulator receiver domain H0N28_15180 PF00486 Transcriptional regulatory protein, C terminal H0N28_15185 PF00672 HAMP domain H0N28_15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_15185 PF00512 His Kinase A (phospho-acceptor) domain H0N28_15195 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_15195 PF12806 Acetyl-CoA dehydrogenase C-terminal like H0N28_15195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_15195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_15200 PF12806 Acetyl-CoA dehydrogenase C-terminal like H0N28_15200 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_15200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_15205 PF06146 Phosphate-starvation-inducible E H0N28_15225 PF00593 TonB dependent receptor H0N28_15225 PF07715 TonB-dependent Receptor Plug Domain H0N28_15235 PF01336 OB-fold nucleic acid binding domain H0N28_15235 PF02938 GAD domain H0N28_15235 PF00152 tRNA synthetases class II (D, K and N) H0N28_15265 PF00534 Glycosyl transferases group 1 H0N28_15265 PF13439 Glycosyltransferase Family 4 H0N28_15270 PF00535 Glycosyl transferase family 2 H0N28_15275 PF01522 Polysaccharide deacetylase H0N28_15290 PF01063 Amino-transferase class IV H0N28_15295 PF08335 GlnD PII-uridylyltransferase H0N28_15295 PF03710 Glutamate-ammonia ligase adenylyltransferase H0N28_15300 PF00512 His Kinase A (phospho-acceptor) domain H0N28_15300 PF07689 KaiB domain H0N28_15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_15315 PF01272 Transcription elongation factor, GreA/GreB, C-term H0N28_15315 PF03449 Transcription elongation factor, N-terminal H0N28_15325 PF01381 Helix-turn-helix H0N28_15340 PF13356 Arm DNA-binding domain H0N28_15340 PF00589 Phage integrase family H0N28_15350 PF02547 Queuosine biosynthesis protein H0N28_15365 PF01702 Queuine tRNA-ribosyltransferase H0N28_15370 PF02699 Preprotein translocase subunit H0N28_15375 PF07549 SecD/SecF GG Motif H0N28_15375 PF13721 SecD export protein N-terminal TM region H0N28_15375 PF02355 Protein export membrane protein H0N28_15380 PF07549 SecD/SecF GG Motif H0N28_15380 PF02355 Protein export membrane protein H0N28_15385 PF04127 DNA / pantothenate metabolism flavoprotein H0N28_15385 PF02441 Flavoprotein H0N28_15390 PF04002 RadC-like JAB domain H0N28_15395 PF01062 Bestrophin, RFP-TM, chloride channel H0N28_15400 PF02811 PHP domain H0N28_15405 PF04279 Intracellular septation protein A H0N28_15410 PF03795 YCII-related domain H0N28_15420 PF01266 FAD dependent oxidoreductase H0N28_15420 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H0N28_15435 PF13356 Arm DNA-binding domain H0N28_15435 PF00589 Phage integrase family H0N28_15460 PF13411 MerR HTH family regulatory protein H0N28_15475 PF02421 Ferrous iron transport protein B H0N28_15475 PF07664 Ferrous iron transport protein B C terminus H0N28_15475 PF07670 Nucleoside recognition H0N28_15485 PF00873 AcrB/AcrD/AcrF family H0N28_15490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_15510 PF07731 Multicopper oxidase H0N28_15510 PF00394 Multicopper oxidase H0N28_15510 PF07732 Multicopper oxidase H0N28_15520 PF00486 Transcriptional regulatory protein, C terminal H0N28_15520 PF00072 Response regulator receiver domain H0N28_15525 PF00512 His Kinase A (phospho-acceptor) domain H0N28_15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_15525 PF00672 HAMP domain H0N28_15530 PF04945 YHS domain H0N28_15605 PF03887 YfbU domain H0N28_15635 PF03061 Thioesterase superfamily H0N28_15640 PF00085 Thioredoxin H0N28_15645 PF00561 alpha/beta hydrolase fold H0N28_15650 PF04273 Putative phosphatase (DUF442) H0N28_15650 PF00753 Metallo-beta-lactamase superfamily H0N28_15660 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_15660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H0N28_15695 PF17152 Periplasmic sensor domain H0N28_15695 PF00990 Diguanylate cyclase, GGDEF domain H0N28_15700 PF01389 OmpA-like transmembrane domain H0N28_15700 PF00691 OmpA family H0N28_15705 PF00149 Calcineurin-like phosphoesterase H0N28_15705 PF10518 TAT (twin-arginine translocation) pathway signal sequence H0N28_15710 PF13091 PLD-like domain H0N28_15720 PF13167 GTP-binding GTPase N-terminal H0N28_15720 PF01926 50S ribosome-binding GTPase H0N28_15720 PF16360 GTP-binding GTPase Middle Region H0N28_15740 PF00149 Calcineurin-like phosphoesterase H0N28_15745 PF00398 Ribosomal RNA adenine dimethylase H0N28_15750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H0N28_15755 PF00572 Ribosomal protein L13 H0N28_15760 PF00380 Ribosomal protein S9/S16 H0N28_15765 PF00043 Glutathione S-transferase, C-terminal domain H0N28_15765 PF13417 Glutathione S-transferase, N-terminal domain H0N28_15770 PF04386 Stringent starvation protein B H0N28_15780 PF02785 Biotin carboxylase C-terminal domain H0N28_15780 PF00289 Biotin carboxylase, N-terminal domain H0N28_15780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H0N28_15780 PF00364 Biotin-requiring enzyme H0N28_15790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_15790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_15790 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_15795 PF01039 Carboxyl transferase domain H0N28_15810 PF00440 Bacterial regulatory proteins, tetR family H0N28_15810 PF17932 Tetracyclin repressor-like, C-terminal domain H0N28_15815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_15815 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_15815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_15860 PF01066 CDP-alcohol phosphatidyltransferase H0N28_15865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H0N28_15885 PF00056 lactate/malate dehydrogenase, NAD binding domain H0N28_15885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H0N28_15895 PF01464 Transglycosylase SLT domain H0N28_15895 PF10145 Phage-related minor tail protein H0N28_15895 PF01551 Peptidase family M23 H0N28_15900 PF00919 Uncharacterized protein family UPF0004 H0N28_15900 PF01938 TRAM domain H0N28_15900 PF04055 Radical SAM superfamily H0N28_15905 PF02562 PhoH-like protein H0N28_15910 PF02130 Uncharacterized protein family UPF0054 H0N28_15935 PF03358 NADPH-dependent FMN reductase H0N28_15940 PF03631 Virulence factor BrkB H0N28_15945 PF00892 EamA-like transporter family H0N28_15950 PF12833 Helix-turn-helix domain H0N28_15955 PF01557 Fumarylacetoacetate (FAA) hydrolase family H0N28_16000 PF17876 Cold shock domain H0N28_16000 PF08461 Ribonuclease R winged-helix domain H0N28_16000 PF08206 Ribonuclease B OB domain H0N28_16000 PF00773 RNB domain H0N28_16000 PF00575 S1 RNA binding domain H0N28_16005 PF01432 Peptidase family M3 H0N28_16010 PF09526 Probable metal-binding protein (DUF2387) H0N28_16040 PF03937 Flavinator of succinate dehydrogenase H0N28_16045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_16045 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_16045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_16050 PF00743 Flavin-binding monooxygenase-like H0N28_16055 PF01196 Ribosomal protein L17 H0N28_16060 PF01000 RNA polymerase Rpb3/RpoA insert domain H0N28_16060 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H0N28_16060 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H0N28_16065 PF01479 S4 domain H0N28_16065 PF00163 Ribosomal protein S4/S9 N-terminal domain H0N28_16070 PF00411 Ribosomal protein S11 H0N28_16075 PF00416 Ribosomal protein S13/S18 H0N28_16080 PF00444 Ribosomal protein L36 H0N28_16085 PF00344 SecY translocase H0N28_16090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H0N28_16095 PF00327 Ribosomal protein L30p/L7e H0N28_16100 PF00333 Ribosomal protein S5, N-terminal domain H0N28_16100 PF03719 Ribosomal protein S5, C-terminal domain H0N28_16105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H0N28_16110 PF00347 Ribosomal protein L6 H0N28_16115 PF00410 Ribosomal protein S8 H0N28_16120 PF00253 Ribosomal protein S14p/S29e H0N28_16125 PF00281 Ribosomal protein L5 H0N28_16125 PF00673 ribosomal L5P family C-terminus H0N28_16130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H0N28_16130 PF00467 KOW motif H0N28_16135 PF00238 Ribosomal protein L14p/L23e H0N28_16140 PF00366 Ribosomal protein S17 H0N28_16145 PF00831 Ribosomal L29 protein H0N28_16150 PF00252 Ribosomal protein L16p/L10e H0N28_16155 PF00189 Ribosomal protein S3, C-terminal domain H0N28_16155 PF07650 KH domain H0N28_16160 PF00237 Ribosomal protein L22p/L17e H0N28_16165 PF00203 Ribosomal protein S19 H0N28_16170 PF00181 Ribosomal Proteins L2, RNA binding domain H0N28_16170 PF03947 Ribosomal Proteins L2, C-terminal domain H0N28_16175 PF00276 Ribosomal protein L23 H0N28_16180 PF00573 Ribosomal protein L4/L1 family H0N28_16185 PF00297 Ribosomal protein L3 H0N28_16190 PF00338 Ribosomal protein S10p/S20e H0N28_16195 PF00117 Glutamine amidotransferase class-I H0N28_16200 PF01053 Cys/Met metabolism PLP-dependent enzyme H0N28_16205 PF05872 Bacterial protein of unknown function (DUF853) H0N28_16215 PF00970 Oxidoreductase FAD-binding domain H0N28_16215 PF00175 Oxidoreductase NAD-binding domain H0N28_16215 PF00042 Globin H0N28_16220 PF02082 Transcriptional regulator H0N28_16225 PF01926 50S ribosome-binding GTPase H0N28_16235 PF00375 Sodium:dicarboxylate symporter family H0N28_16245 PF01553 Acyltransferase H0N28_16260 PF00271 Helicase conserved C-terminal domain H0N28_16260 PF17191 RecG wedge domain H0N28_16260 PF00270 DEAD/DEAH box helicase H0N28_16265 PF00156 Phosphoribosyl transferase domain H0N28_16270 PF00293 NUDIX domain H0N28_16275 PF03641 Possible lysine decarboxylase H0N28_16280 PF01544 CorA-like Mg2+ transporter protein H0N28_16290 PF05494 MlaC protein H0N28_16300 PF02405 Permease MlaE H0N28_16305 PF00005 ABC transporter H0N28_16315 PF03880 DbpA RNA binding domain H0N28_16315 PF00270 DEAD/DEAH box helicase H0N28_16315 PF00271 Helicase conserved C-terminal domain H0N28_16315 PF12343 Cold shock protein DEAD box A H0N28_16320 PF00459 Inositol monophosphatase family H0N28_16325 PF02780 Transketolase, C-terminal domain H0N28_16325 PF02779 Transketolase, pyrimidine binding domain H0N28_16325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H0N28_16330 PF00925 GTP cyclohydrolase II H0N28_16335 PF01218 Coproporphyrinogen III oxidase H0N28_16340 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H0N28_16340 PF01488 Shikimate / quinate 5-dehydrogenase H0N28_16340 PF08501 Shikimate dehydrogenase substrate binding domain H0N28_16350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_16350 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_16350 PF12806 Acetyl-CoA dehydrogenase C-terminal like H0N28_16350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_16360 PF04024 PspC domain H0N28_16365 PF00571 CBS domain H0N28_16380 PF07690 Major Facilitator Superfamily H0N28_16385 PF02091 Glycyl-tRNA synthetase alpha subunit H0N28_16390 PF02092 Glycyl-tRNA synthetase beta subunit H0N28_16390 PF05746 DALR anticodon binding domain H0N28_16410 PF00892 EamA-like transporter family H0N28_16415 PF03466 LysR substrate binding domain H0N28_16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_16430 PF00082 Subtilase family H0N28_16430 PF05922 Peptidase inhibitor I9 H0N28_16445 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H0N28_16450 PF04996 Succinylarginine dihydrolase H0N28_16455 PF00171 Aldehyde dehydrogenase family H0N28_16460 PF04958 Arginine N-succinyltransferase beta subunit H0N28_16465 PF00202 Aminotransferase class-III H0N28_16470 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H0N28_16470 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H0N28_16475 PF00324 Amino acid permease H0N28_16485 PF08241 Methyltransferase domain H0N28_16505 PF13614 AAA domain H0N28_16510 PF01594 AI-2E family transporter H0N28_16515 PF00080 Copper/zinc superoxide dismutase (SODC) H0N28_16520 PF12805 FUSC-like inner membrane protein yccS H0N28_16525 PF07690 Major Facilitator Superfamily H0N28_16535 PF02525 Flavodoxin-like fold H0N28_16540 PF03992 Antibiotic biosynthesis monooxygenase H0N28_16550 PF02913 FAD linked oxidases, C-terminal domain H0N28_16550 PF01565 FAD binding domain H0N28_16555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H0N28_16555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H0N28_16560 PF00892 EamA-like transporter family H0N28_16565 PF00892 EamA-like transporter family H0N28_16575 PF01925 Sulfite exporter TauE/SafE H0N28_16580 PF09157 Pseudouridine synthase II TruB, C-terminal H0N28_16580 PF16198 tRNA pseudouridylate synthase B C-terminal domain H0N28_16580 PF01509 TruB family pseudouridylate synthase (N terminal domain) H0N28_16585 PF03280 Proteobacterial lipase chaperone protein H0N28_16590 PF00561 alpha/beta hydrolase fold H0N28_16595 PF01245 Ribosomal protein L19 H0N28_16600 PF01746 tRNA (Guanine-1)-methyltransferase H0N28_16605 PF05239 PRC-barrel domain H0N28_16605 PF01782 RimM N-terminal domain H0N28_16610 PF00886 Ribosomal protein S16 H0N28_16650 PF02401 LytB protein H0N28_16655 PF00625 Guanylate kinase H0N28_16660 PF01192 RNA polymerase Rpb6 H0N28_16670 PF04607 Region found in RelA / SpoT proteins H0N28_16670 PF02824 TGS domain H0N28_16670 PF13291 ACT domain H0N28_16675 PF01042 Endoribonuclease L-PSP H0N28_16680 PF04324 BFD-like [2Fe-2S] binding domain H0N28_16685 PF00210 Ferritin-like domain H0N28_16690 PF15864 Protein glycosylation ligase H0N28_16690 PF04932 O-Antigen ligase H0N28_16690 PF11846 Virulence factor membrane-bound polymerase, C-terminal H0N28_16695 PF00114 Pilin (bacterial filament) H0N28_16695 PF07963 Prokaryotic N-terminal methylation motif H0N28_16705 PF04536 TPM domain H0N28_16710 PF04011 LemA family H0N28_16720 PF07992 Pyridine nucleotide-disulphide oxidoreductase H0N28_16720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H0N28_16725 PF04898 Glutamate synthase central domain H0N28_16725 PF00310 Glutamine amidotransferases class-II H0N28_16725 PF01645 Conserved region in glutamate synthase H0N28_16725 PF01493 GXGXG motif H0N28_16735 PF01761 3-dehydroquinate synthase H0N28_16740 PF01202 Shikimate kinase H0N28_16745 PF00263 Bacterial type II and III secretion system protein H0N28_16745 PF07660 Secretin and TonB N terminus short domain H0N28_16745 PF03958 Bacterial type II/III secretion system short domain H0N28_16745 PF11741 AMIN domain H0N28_16755 PF04350 Pilus assembly protein, PilO H0N28_16760 PF05137 Fimbrial assembly protein (PilN) H0N28_16765 PF11104 Type IV pilus assembly protein PilM; H0N28_16770 PF00912 Transglycosylase H0N28_16770 PF00905 Penicillin binding protein transpeptidase domain H0N28_16770 PF17092 Penicillin-binding protein OB-like domain H0N28_16775 PF13847 Methyltransferase domain H0N28_16785 PF00953 Glycosyl transferase family 4 H0N28_16790 PF08245 Mur ligase middle domain H0N28_16790 PF01225 Mur ligase family, catalytic domain H0N28_16790 PF02875 Mur ligase family, glutamate ligase domain H0N28_16795 PF08245 Mur ligase middle domain H0N28_16795 PF01225 Mur ligase family, catalytic domain H0N28_16795 PF02875 Mur ligase family, glutamate ligase domain H0N28_16800 PF00905 Penicillin binding protein transpeptidase domain H0N28_16800 PF03717 Penicillin-binding Protein dimerisation domain H0N28_16810 PF01795 MraW methylase family H0N28_16825 PF00749 tRNA synthetases class I (E and Q), catalytic domain H0N28_16840 PF00324 Amino acid permease H0N28_16870 PF01545 Cation efflux family H0N28_16875 PF00873 AcrB/AcrD/AcrF family H0N28_16880 PF00529 HlyD membrane-fusion protein of T1SS H0N28_16880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H0N28_16905 PF12848 ABC transporter H0N28_16905 PF00005 ABC transporter H0N28_16910 PF01053 Cys/Met metabolism PLP-dependent enzyme H0N28_16915 PF01965 DJ-1/PfpI family H0N28_16930 PF00106 short chain dehydrogenase H0N28_16935 PF01740 STAS domain H0N28_16935 PF00916 Sulfate permease family H0N28_16940 PF16921 Tex protein YqgF-like domain H0N28_16940 PF09371 Tex-like protein N-terminal domain H0N28_16940 PF00575 S1 RNA binding domain H0N28_16940 PF17674 HHH domain H0N28_16945 PF00486 Transcriptional regulatory protein, C terminal H0N28_16945 PF00072 Response regulator receiver domain H0N28_16950 PF00512 His Kinase A (phospho-acceptor) domain H0N28_16950 PF00672 HAMP domain H0N28_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_16960 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H0N28_16960 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H0N28_16965 PF00583 Acetyltransferase (GNAT) family H0N28_16985 PF00475 Imidazoleglycerol-phosphate dehydratase H0N28_16990 PF00117 Glutamine amidotransferase class-I H0N28_17005 PF00977 Histidine biosynthesis protein H0N28_17020 PF03992 Antibiotic biosynthesis monooxygenase H0N28_17035 PF01636 Phosphotransferase enzyme family H0N28_17040 PF00977 Histidine biosynthesis protein H0N28_17055 PF00230 Major intrinsic protein H0N28_17080 PF02705 K+ potassium transporter H0N28_17090 PF12833 Helix-turn-helix domain H0N28_17115 PF02525 Flavodoxin-like fold H0N28_17120 PF01638 HxlR-like helix-turn-helix H0N28_17150 PF01638 HxlR-like helix-turn-helix H0N28_17170 PF02311 AraC-like ligand binding domain H0N28_17170 PF12833 Helix-turn-helix domain H0N28_17195 PF03466 LysR substrate binding domain H0N28_17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_17200 PF07690 Major Facilitator Superfamily H0N28_17230 PF01593 Flavin containing amine oxidoreductase H0N28_17235 PF05726 Pirin C-terminal cupin domain H0N28_17235 PF02678 Pirin H0N28_17240 PF00857 Isochorismatase family H0N28_17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H0N28_17250 PF00171 Aldehyde dehydrogenase family H0N28_17255 PF00202 Aminotransferase class-III H0N28_17260 PF00155 Aminotransferase class I and II H0N28_17260 PF00392 Bacterial regulatory proteins, gntR family H0N28_17265 PF00324 Amino acid permease H0N28_17275 PF03591 AzlC protein H0N28_17285 PF00436 Single-strand binding protein family H0N28_17290 PF07690 Major Facilitator Superfamily H0N28_17300 PF03070 TENA/THI-4/PQQC family H0N28_17300 PF08543 Phosphomethylpyrimidine kinase H0N28_17300 PF02581 Thiamine monophosphate synthase H0N28_17305 PF06942 GlpM protein H0N28_17315 PF00107 Zinc-binding dehydrogenase H0N28_17315 PF08240 Alcohol dehydrogenase GroES-like domain H0N28_17320 PF16925 Tetracyclin repressor-like, C-terminal domain H0N28_17320 PF00440 Bacterial regulatory proteins, tetR family H0N28_17325 PF17760 UvrA interaction domain H0N28_17325 PF00005 ABC transporter H0N28_17325 PF17755 UvrA DNA-binding domain H0N28_17330 PF00990 Diguanylate cyclase, GGDEF domain H0N28_17340 PF02028 BCCT, betaine/carnitine/choline family transporter H0N28_17350 PF00474 Sodium:solute symporter family H0N28_17355 PF04341 Protein of unknown function, DUF485 H0N28_17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_17360 PF00512 His Kinase A (phospho-acceptor) domain H0N28_17360 PF01627 Hpt domain H0N28_17360 PF00072 Response regulator receiver domain H0N28_17360 PF00672 HAMP domain H0N28_17370 PF00196 Bacterial regulatory proteins, luxR family H0N28_17370 PF00072 Response regulator receiver domain H0N28_17375 PF03358 NADPH-dependent FMN reductase H0N28_17380 PF00296 Luciferase-like monooxygenase H0N28_17385 PF01037 Lrp/AsnC ligand binding domain H0N28_17390 PF00857 Isochorismatase family H0N28_17395 PF13193 AMP-binding enzyme C-terminal domain H0N28_17395 PF00501 AMP-binding enzyme H0N28_17395 PF16177 Acetyl-coenzyme A synthetase N-terminus H0N28_17405 PF00924 Mechanosensitive ion channel H0N28_17415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H0N28_17420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H0N28_17440 PF02272 DHHA1 domain H0N28_17440 PF01368 DHH family H0N28_17440 PF17768 RecJ OB domain H0N28_17445 PF01243 Pyridoxamine 5'-phosphate oxidase H0N28_17445 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H0N28_17450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H0N28_17450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H0N28_17450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H0N28_17450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H0N28_17455 PF00571 CBS domain H0N28_17455 PF00478 IMP dehydrogenase / GMP reductase domain H0N28_17460 PF03692 Putative zinc- or iron-chelating domain H0N28_17465 PF01613 Flavin reductase like domain H0N28_17465 PF00258 Flavodoxin H0N28_17470 PF07715 TonB-dependent Receptor Plug Domain H0N28_17470 PF00593 TonB dependent receptor H0N28_17475 PF01169 Uncharacterized protein family UPF0016 H0N28_17485 PF00364 Biotin-requiring enzyme H0N28_17485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H0N28_17485 PF02817 e3 binding domain H0N28_17490 PF00456 Transketolase, thiamine diphosphate binding domain H0N28_17490 PF17831 Pyruvate dehydrogenase E1 component middle domain H0N28_17495 PF01551 Peptidase family M23 H0N28_17505 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H0N28_17510 PF12327 FtsZ family, C-terminal domain H0N28_17510 PF00091 Tubulin/FtsZ family, GTPase domain H0N28_17515 PF02491 SHS2 domain inserted in FTSA H0N28_17520 PF08478 POTRA domain, FtsQ-type H0N28_17520 PF03799 Cell division protein FtsQ H0N28_17525 PF07478 D-ala D-ala ligase C-terminus H0N28_17525 PF01820 D-ala D-ala ligase N-terminus H0N28_17530 PF02875 Mur ligase family, glutamate ligase domain H0N28_17530 PF08245 Mur ligase middle domain H0N28_17530 PF01225 Mur ligase family, catalytic domain H0N28_17535 PF04101 Glycosyltransferase family 28 C-terminal domain H0N28_17535 PF03033 Glycosyltransferase family 28 N-terminal domain H0N28_17540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H0N28_17540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H0N28_17550 PF07715 TonB-dependent Receptor Plug Domain H0N28_17550 PF00593 TonB dependent receptor H0N28_17560 PF00156 Phosphoribosyl transferase domain H0N28_17565 PF03372 Endonuclease/Exonuclease/phosphatase family H0N28_17570 PF03960 ArsC family H0N28_17580 PF07859 alpha/beta hydrolase fold H0N28_17585 PF00990 Diguanylate cyclase, GGDEF domain H0N28_17585 PF07694 5TMR of 5TMR-LYT H0N28_17590 PF11412 Disulphide bond corrector protein DsbC H0N28_17590 PF02683 Cytochrome C biogenesis protein transmembrane region H0N28_17620 PF00576 HIUase/Transthyretin family H0N28_17625 PF00860 Permease family H0N28_17635 PF01494 FAD binding domain H0N28_17640 PF03561 Allantoicase repeat H0N28_17645 PF04115 Ureidoglycolate lyase H0N28_17650 PF00986 DNA gyrase B subunit, carboxyl terminus H0N28_17650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H0N28_17650 PF01751 Toprim domain H0N28_17650 PF00204 DNA gyrase B H0N28_17655 PF05728 Uncharacterised protein family (UPF0227) H0N28_17770 PF01758 Sodium Bile acid symporter family H0N28_17780 PF03358 NADPH-dependent FMN reductase H0N28_17790 PF02796 Helix-turn-helix domain of resolvase H0N28_17790 PF00239 Resolvase, N terminal domain H0N28_17815 PF00809 Pterin binding enzyme H0N28_17855 PF02899 Phage integrase, N-terminal SAM-like domain H0N28_17855 PF00589 Phage integrase family H0N28_17885 PF00916 Sulfate permease family H0N28_17885 PF01740 STAS domain H0N28_17890 PF00582 Universal stress protein family H0N28_17920 PF00665 Integrase core domain H0N28_17940 PF13335 Magnesium chelatase, subunit ChlI C-terminal H0N28_17940 PF01078 Magnesium chelatase, subunit ChlI H0N28_17945 PF00392 Bacterial regulatory proteins, gntR family H0N28_17945 PF00155 Aminotransferase class I and II H0N28_17955 PF00701 Dihydrodipicolinate synthetase family H0N28_17965 PF03573 outer membrane porin, OprD family H0N28_17970 PF00719 Inorganic pyrophosphatase H0N28_17985 PF00501 AMP-binding enzyme H0N28_17985 PF13193 AMP-binding enzyme C-terminal domain H0N28_17990 PF00521 DNA gyrase/topoisomerase IV, subunit A H0N28_17990 PF03989 DNA gyrase C-terminal domain, beta-propeller H0N28_17995 PF07690 Major Facilitator Superfamily H0N28_18000 PF03458 UPF0126 domain H0N28_18005 PF02810 SEC-C motif H0N28_18010 PF03741 Integral membrane protein TerC family H0N28_18010 PF03471 Transporter associated domain H0N28_18015 PF03641 Possible lysine decarboxylase H0N28_18020 PF07690 Major Facilitator Superfamily H0N28_18030 PF11799 impB/mucB/samB family C-terminal domain H0N28_18030 PF00817 impB/mucB/samB family H0N28_18030 PF11798 IMS family HHH motif H0N28_18045 PF08497 Radical SAM N-terminal H0N28_18045 PF11842 Domain of unknown function (DUF3362) H0N28_18045 PF04055 Radical SAM superfamily H0N28_18065 PF03358 NADPH-dependent FMN reductase H0N28_18075 PF00291 Pyridoxal-phosphate dependent enzyme H0N28_18135 PF01327 Polypeptide deformylase H0N28_18145 PF17782 DprA winged helix domain H0N28_18145 PF02481 DNA recombination-mediator protein A H0N28_18150 PF01300 Telomere recombination H0N28_18155 PF00892 EamA-like transporter family H0N28_18160 PF00440 Bacterial regulatory proteins, tetR family H0N28_18165 PF07690 Major Facilitator Superfamily H0N28_18175 PF00255 Glutathione peroxidase H0N28_18185 PF11008 Protein of unknown function (DUF2846) H0N28_18190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H0N28_18195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H0N28_18195 PF02874 ATP synthase alpha/beta family, beta-barrel domain H0N28_18200 PF00231 ATP synthase H0N28_18205 PF02874 ATP synthase alpha/beta family, beta-barrel domain H0N28_18205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H0N28_18205 PF00306 ATP synthase alpha/beta chain, C terminal domain H0N28_18210 PF00213 ATP synthase delta (OSCP) subunit H0N28_18215 PF00430 ATP synthase B/B' CF(0) H0N28_18220 PF00137 ATP synthase subunit C H0N28_18225 PF00119 ATP synthase A chain H0N28_18245 PF00005 ABC transporter H0N28_18250 PF00950 ABC 3 transport family H0N28_18255 PF01810 LysE type translocator H0N28_18260 PF04261 Dyp-type peroxidase family H0N28_18265 PF03949 Malic enzyme, NAD binding domain H0N28_18265 PF00390 Malic enzyme, N-terminal domain H0N28_18270 PF03485 Arginyl tRNA synthetase N terminal domain H0N28_18270 PF05746 DALR anticodon binding domain H0N28_18270 PF00750 tRNA synthetases class I (R) H0N28_18290 PF05726 Pirin C-terminal cupin domain H0N28_18290 PF02678 Pirin H0N28_18300 PF03551 Transcriptional regulator PadR-like family H0N28_18305 PF01909 Nucleotidyltransferase domain H0N28_18305 PF13427 Domain of unknown function (DUF4111) H0N28_18310 PF02540 NAD synthase H0N28_18310 PF00117 Glutamine amidotransferase class-I H0N28_18310 PF00958 GMP synthase C terminal domain H0N28_18315 PF04286 Protein of unknown function (DUF445) H0N28_18320 PF07681 DoxX H0N28_18325 PF09335 SNARE associated Golgi protein H0N28_18340 PF13614 AAA domain H0N28_18350 PF01722 BolA-like protein H0N28_18365 PF01648 4'-phosphopantetheinyl transferase superfamily H0N28_18370 PF16363 GDP-mannose 4,6 dehydratase H0N28_18385 PF13193 AMP-binding enzyme C-terminal domain H0N28_18385 PF00501 AMP-binding enzyme H0N28_18385 PF00668 Condensation domain H0N28_18385 PF00550 Phosphopantetheine attachment site H0N28_18385 PF00975 Thioesterase domain H0N28_18390 PF00550 Phosphopantetheine attachment site H0N28_18390 PF00501 AMP-binding enzyme H0N28_18390 PF13193 AMP-binding enzyme C-terminal domain H0N28_18390 PF00668 Condensation domain H0N28_18390 PF14765 Polyketide synthase dehydratase H0N28_18390 PF16197 Ketoacyl-synthetase C-terminal extension H0N28_18390 PF00109 Beta-ketoacyl synthase, N-terminal domain H0N28_18390 PF02801 Beta-ketoacyl synthase, C-terminal domain H0N28_18390 PF08659 KR domain H0N28_18395 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_18395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_18395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_18400 PF00501 AMP-binding enzyme H0N28_18405 PF00196 Bacterial regulatory proteins, luxR family H0N28_18405 PF03472 Autoinducer binding domain H0N28_18415 PF00765 Autoinducer synthase H0N28_18420 PF07690 Major Facilitator Superfamily H0N28_18420 PF00083 Sugar (and other) transporter H0N28_18425 PF00378 Enoyl-CoA hydratase/isomerase H0N28_18430 PF00378 Enoyl-CoA hydratase/isomerase H0N28_18435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H0N28_18435 PF02770 Acyl-CoA dehydrogenase, middle domain H0N28_18435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H0N28_18440 PF00501 AMP-binding enzyme H0N28_18440 PF13193 AMP-binding enzyme C-terminal domain H0N28_18445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H0N28_18445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H0N28_18450 PF00171 Aldehyde dehydrogenase family H0N28_18460 PF00324 Amino acid permease H0N28_18465 PF00324 Amino acid permease H0N28_18470 PF01042 Endoribonuclease L-PSP H0N28_18475 PF01168 Alanine racemase, N-terminal domain H0N28_18475 PF00842 Alanine racemase, C-terminal domain H0N28_18480 PF01266 FAD dependent oxidoreductase H0N28_18485 PF01037 Lrp/AsnC ligand binding domain H0N28_18495 PF00593 TonB dependent receptor H0N28_18495 PF07715 TonB-dependent Receptor Plug Domain H0N28_18510 PF00849 RNA pseudouridylate synthase H0N28_18550 PF04717 Type VI secretion system, phage-baseplate injector H0N28_18550 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H0N28_18550 PF13296 Putative type VI secretion system Rhs element Vgr H0N28_18590 PF00694 Aconitase C-terminal domain H0N28_18590 PF00330 Aconitase family (aconitate hydratase) H0N28_18595 PF00285 Citrate synthase, C-terminal domain H0N28_18605 PF00392 Bacterial regulatory proteins, gntR family H0N28_18605 PF07729 FCD domain H0N28_18615 PF00155 Aminotransferase class I and II H0N28_18620 PF09330 D-lactate dehydrogenase, membrane binding H0N28_18620 PF01565 FAD binding domain H0N28_18625 PF01070 FMN-dependent dehydrogenase H0N28_18630 PF07729 FCD domain H0N28_18630 PF00392 Bacterial regulatory proteins, gntR family H0N28_18635 PF02652 L-lactate permease H0N28_18640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H0N28_18640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H0N28_18640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H0N28_18640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H0N28_18645 PF16363 GDP-mannose 4,6 dehydratase H0N28_18650 PF00342 Phosphoglucose isomerase H0N28_18655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H0N28_18655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H0N28_18655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H0N28_18660 PF00483 Nucleotidyl transferase H0N28_18665 PF02397 Bacterial sugar transferase H0N28_18670 PF00535 Glycosyl transferase family 2 H0N28_18675 PF00534 Glycosyl transferases group 1 H0N28_18690 PF00534 Glycosyl transferases group 1 H0N28_18690 PF13439 Glycosyltransferase Family 4 H0N28_18695 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_18695 PF14602 Hexapeptide repeat of succinyl-transferase H0N28_18695 PF12464 Maltose acetyltransferase H0N28_18705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H0N28_18710 PF00132 Bacterial transferase hexapeptide (six repeats) H0N28_18715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H0N28_18715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H0N28_18720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H0N28_18720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H0N28_18720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H0N28_18725 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H0N28_18725 PF02563 Polysaccharide biosynthesis/export protein H0N28_18725 PF10531 SLBB domain H0N28_18730 PF01451 Low molecular weight phosphotyrosine protein phosphatase H0N28_18735 PF02706 Chain length determinant protein H0N28_18735 PF13807 G-rich domain on putative tyrosine kinase H0N28_18735 PF13614 AAA domain H0N28_18740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H0N28_18740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_18745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_18745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H0N28_18750 PF03023 Lipid II flippase MurJ H0N28_18755 PF01510 N-acetylmuramoyl-L-alanine amidase H0N28_18760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H0N28_18760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H0N28_18770 PF05506 Domain of unknown function (DUF756) H0N28_18770 PF04185 Phosphoesterase family H0N28_18780 PF01138 3' exoribonuclease family, domain 1 H0N28_18780 PF03725 3' exoribonuclease family, domain 2 H0N28_18785 PF00487 Fatty acid desaturase H0N28_18790 PF00175 Oxidoreductase NAD-binding domain H0N28_18795 PF00440 Bacterial regulatory proteins, tetR family H0N28_18800 PF08360 QacR-like protein, C-terminal region H0N28_18800 PF00440 Bacterial regulatory proteins, tetR family H0N28_18805 PF01323 DSBA-like thioredoxin domain H0N28_18815 PF13419 Haloacid dehalogenase-like hydrolase H0N28_18820 PF00106 short chain dehydrogenase H0N28_18835 PF00583 Acetyltransferase (GNAT) family H0N28_18835 PF00696 Amino acid kinase family H0N28_18840 PF09084 NMT1/THI5 like H0N28_18845 PF09084 NMT1/THI5 like H0N28_18850 PF00296 Luciferase-like monooxygenase H0N28_18855 PF00528 Binding-protein-dependent transport system inner membrane component H0N28_18860 PF00005 ABC transporter H0N28_18865 PF08362 YcdC-like protein, C-terminal region H0N28_18865 PF00440 Bacterial regulatory proteins, tetR family H0N28_18870 PF01048 Phosphorylase superfamily H0N28_18880 PF01687 Riboflavin kinase H0N28_18880 PF06574 FAD synthetase H0N28_18885 PF08264 Anticodon-binding domain of tRNA H0N28_18885 PF00133 tRNA synthetases class I (I, L, M and V) H0N28_18885 PF06827 Zinc finger found in FPG and IleRS H0N28_18890 PF01252 Signal peptidase (SPase) II H0N28_18895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H0N28_18935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H0N28_18940 PF07859 alpha/beta hydrolase fold H0N28_18965 PF01025 GrpE H0N28_18970 PF00012 Hsp70 protein H0N28_18990 PF13406 Transglycosylase SLT domain H0N28_18995 PF02222 ATP-grasp domain H0N28_18995 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H0N28_19000 PF00731 AIR carboxylase H0N28_19010 PF02875 Mur ligase family, glutamate ligase domain H0N28_19010 PF08245 Mur ligase middle domain H0N28_19010 PF01225 Mur ligase family, catalytic domain H0N28_19020 PF01569 PAP2 superfamily H0N28_19025 PF03741 Integral membrane protein TerC family H0N28_19035 PF03738 Glutathionylspermidine synthase preATP-grasp H0N28_19040 PF00355 Rieske [2Fe-2S] domain H0N28_19045 PF01979 Amidohydrolase family H0N28_19050 PF00156 Phosphoribosyl transferase domain H0N28_19060 PF10411 Disulfide bond isomerase protein N-terminus H0N28_19060 PF13098 Thioredoxin-like domain H0N28_19065 PF01545 Cation efflux family H0N28_19065 PF16916 Dimerisation domain of Zinc Transporter H0N28_19070 PF02583 Metal-sensitive transcriptional repressor H0N28_19075 PF10396 GTP-binding protein TrmE N-terminus H0N28_19075 PF12631 MnmE helical domain H0N28_19075 PF01926 50S ribosome-binding GTPase H0N28_19080 PF02096 60Kd inner membrane protein H0N28_19080 PF14849 YidC periplasmic domain H0N28_19085 PF01809 Putative membrane protein insertion efficiency factor H0N28_19090 PF00825 Ribonuclease P H0N28_19095 PF00468 Ribosomal protein L34 H0N28_19120 PF04221 RelB antitoxin