A1S_0001 SM00382 ATPases associated with a variety of cellular activities A1S_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain A1S_0002 SM00480 DNA polymerase III beta subunit A1S_0004 SM00387 Histidine kinase-like ATPases A1S_0004 SM00433 TopoisomeraseII A1S_0007 SM00382 ATPases associated with a variety of cellular activities A1S_0026 SM00382 ATPases associated with a variety of cellular activities A1S_0029 SM00062 Bacterial periplasmic substrate-binding proteins A1S_0030 SM00062 Bacterial periplasmic substrate-binding proteins A1S_0045 SM00644 A1S_0045 A1S_0050 SM00226 Low molecular weight phosphatase family A1S_0052 SM00984 UDP binding domain A1S_0063 SM00984 UDP binding domain A1S_0068 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_0068 SM00895 A1S_0068 A1S_0072 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_0072 SM00895 A1S_0072 A1S_0080 SM00825 Beta-ketoacyl synthase A1S_0081 SM00671 Sel1-like repeats. A1S_0094 SM00344 helix_turn_helix ASNC type A1S_0096 SM01005 Alanine racemase, C-terminal domain A1S_0111 SM00421 helix_turn_helix, Lux Regulon A1S_0114 SM00823 Phosphopantetheine attachment site A1S_0114 SM01294 A1S_0114 A1S_0115 SM00823 Phosphopantetheine attachment site A1S_0115 SM00824 Thioesterase A1S_0140 SM00919 Malic enzyme, NAD binding domain A1S_0140 SM01274 A1S_0140 A1S_0144 SM00382 ATPases associated with a variety of cellular activities A1S_0155 SM00382 ATPases associated with a variety of cellular activities A1S_0160 SM00342 helix_turn_helix, arabinose operon control protein A1S_0181 SM00422 helix_turn_helix, mercury resistance A1S_0183 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_0187 SM00641 Glycosyl hydrolases family 25 A1S_0190 SM01091 Transporter associated domain A1S_0203 SM01130 A1S_0203 A1S_0204 SM01007 Class II Aldolase and Adducin N-terminal domain A1S_0205 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_0211 SM00382 ATPases associated with a variety of cellular activities A1S_0218 SM00938 Nitrogen regulatory protein P-II A1S_0231 SM00245 tail specific protease A1S_0234 SM00448 cheY-homologous receiver domain A1S_0235 SM00387 Histidine kinase-like ATPases A1S_0235 SM00388 His Kinase A (phosphoacceptor) domain A1S_0236 SM00421 helix_turn_helix, Lux Regulon A1S_0236 SM00448 cheY-homologous receiver domain A1S_0242 SM00899 A1S_0242 A1S_0261 SM00448 cheY-homologous receiver domain A1S_0261 SM00850 LytTr DNA-binding domain A1S_0268 SM00528 Domain in histone-like proteins of HNS family A1S_0270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1S_0272 SM00240 Forkhead associated domain A1S_0282 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A1S_0282 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1S_0283 SM00649 Ribosomal protein L11/L12 A1S_0288 SM00663 RNA polymerase I subunit A N-terminus A1S_0300 SM00422 helix_turn_helix, mercury resistance A1S_0310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1S_0310 SM00465 GIY-YIG type nucleases (URI domain) A1S_0316 SM00346 helix_turn_helix isocitrate lyase regulation A1S_0319 SM00732 Likely ribonuclease with RNase H fold. A1S_0322 SM00028 Tetratricopeptide repeats A1S_0324 SM00967 RNA 2'-O ribose methyltransferase substrate binding A1S_0335 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_0358 SM00382 ATPases associated with a variety of cellular activities A1S_0360 SM01387 A1S_0360 A1S_0361 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_0361 SM00322 K homology RNA-binding domain A1S_0364 SM00271 DnaJ molecular chaperone homology domain A1S_0368 SM00487 DEAD-like helicases superfamily A1S_0368 SM00490 helicase superfamily c-terminal domain A1S_0375 SM00116 Domain in cystathionine beta-synthase and other proteins. A1S_0375 SM01091 Transporter associated domain A1S_0383 SM00849 Metallo-beta-lactamase superfamily A1S_0397 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_0403 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_0413 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A1S_0420 SM01329 A1S_0420 A1S_0421 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_0422 SM00342 helix_turn_helix, arabinose operon control protein A1S_0424 SM00870 A1S_0424 A1S_0427 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1S_0433 SM00382 ATPases associated with a variety of cellular activities A1S_0436 SM00829 Enoylreductase A1S_0439 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1S_0439 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1S_0439 SM00493 A1S_0439 A1S_0443 SM00360 RNA recognition motif A1S_0469 SM00671 Sel1-like repeats. A1S_0472 SM00917 LeuA allosteric (dimerisation) domain A1S_0473 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A1S_0477 SM00382 ATPases associated with a variety of cellular activities A1S_0477 SM00994 ClpX C4-type zinc finger A1S_0477 SM01086 C-terminal, D2-small domain, of ClpB protein A1S_0493 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1S_0493 SM00245 tail specific protease A1S_0496 SM00014 Acid phosphatase homologues A1S_0498 SM00562 A1S_0498 A1S_0500 SM00028 Tetratricopeptide repeats A1S_0505 SM00564 beta-propeller repeat A1S_0508 SM00563 Phosphate acyltransferases A1S_0522 SM00825 Beta-ketoacyl synthase A1S_0524 SM00822 A1S_0524 A1S_0525 SM00825 Beta-ketoacyl synthase A1S_0530 SM00450 Rhodanese Homology Domain A1S_0532 SM00479 A1S_0532 A1S_0536 SM00382 ATPases associated with a variety of cellular activities A1S_0546 SM00052 Putative diguanylate phosphodiesterase A1S_0546 SM00267 diguanylate cyclase A1S_0549 SM01236 A1S_0549 A1S_0566 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A1S_0566 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A1S_0574 SM00073 Histidine Phosphotransfer domain A1S_0574 SM00387 Histidine kinase-like ATPases A1S_0574 SM00388 His Kinase A (phosphoacceptor) domain A1S_0574 SM00448 cheY-homologous receiver domain A1S_0579 SM00954 Region found in RelA / SpoT proteins A1S_0582 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1S_0592 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1S_0602 SM00873 B3/4 domain A1S_0602 SM00874 tRNA synthetase B5 domain A1S_0602 SM00896 Ferredoxin-fold anticodon binding domain A1S_0603 SM00411 bacterial (prokaryotic) histone like domain A1S_0609 SM00977 TilS substrate C-terminal domain A1S_0612 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1S_0612 SM00474 3'-5' exonuclease A1S_0612 SM00475 5'-3' exonuclease A1S_0612 SM00482 DNA polymerase A domain A1S_0616 SM00382 ATPases associated with a variety of cellular activities A1S_0618 SM00347 helix_turn_helix multiple antibiotic resistance protein A1S_0621 SM00331 Sigma factor PP2C-like phosphatases A1S_0629 SM00490 helicase superfamily c-terminal domain A1S_0648 SM00318 Staphylococcal nuclease homologues A1S_0651 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1S_0651 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1S_0651 SM00493 A1S_0651 A1S_0652 SM00899 A1S_0652 A1S_0654 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1S_0671 SM00226 Low molecular weight phosphatase family A1S_0672 SM00857 Resolvase, N terminal domain A1S_0732 SM00342 helix_turn_helix, arabinose operon control protein A1S_0738 SM00903 Flavin reductase like domain A1S_0748 SM00448 cheY-homologous receiver domain A1S_0748 SM00862 Transcriptional regulatory protein, C terminal A1S_0749 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1S_0749 SM00387 Histidine kinase-like ATPases A1S_0749 SM00388 His Kinase A (phosphoacceptor) domain A1S_0751 SM00267 diguanylate cyclase A1S_0756 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A1S_0757 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1S_0757 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A1S_0766 SM00357 Cold shock protein domain A1S_0796 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_0798 SM00771 ZipA, C-terminal domain (FtsZ-binding) A1S_0799 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1S_0799 SM00292 breast cancer carboxy-terminal domain A1S_0799 SM00532 Ligase N family A1S_0810 SM00363 S4 RNA-binding domain A1S_0817 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1S_0818 SM00822 A1S_0818 A1S_0820 SM00257 Lysin motif A1S_0829 SM01400 A1S_0829 A1S_0836 SM00028 Tetratricopeptide repeats A1S_0838 SM00493 A1S_0838 A1S_0839 SM00400 zinc finger A1S_0841 SM00363 S4 RNA-binding domain A1S_0849 SM01329 A1S_0849 A1S_0863 SM00825 Beta-ketoacyl synthase A1S_0868 SM00838 Elongation factor G C-terminus A1S_0868 SM00889 Elongation factor G, domain IV A1S_0876 SM00843 A1S_0876 A1S_0883 SM00563 Phosphate acyltransferases A1S_0897 SM00382 ATPases associated with a variety of cellular activities A1S_0906 SM01004 Delta-aminolevulinic acid dehydratase A1S_0916 SM01130 A1S_0916 A1S_0936 SM01322 A1S_0936 A1S_0944 SM00346 helix_turn_helix isocitrate lyase regulation A1S_0948 SM00822 A1S_0948 A1S_0963 SM00342 helix_turn_helix, arabinose operon control protein A1S_0967 SM00822 A1S_0967 A1S_0970 SM00861 Transketolase, pyrimidine binding domain A1S_0971 SM01018 B12 binding domain A1S_0984 SM00947 Carbonic anhydrase A1S_0986 SM00382 ATPases associated with a variety of cellular activities A1S_1005 SM01091 Transporter associated domain A1S_1015 SM00988 UreE urease accessory protein, N-terminal domain A1S_1024 SM00478 endonuclease III A1S_1026 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1S_1030 SM00382 ATPases associated with a variety of cellular activities A1S_1031 SM00464 Found in ATP-dependent protease La (LON) A1S_1039 SM01011 Aminopeptidase P, N-terminal domain A1S_1043 SM00422 helix_turn_helix, mercury resistance A1S_1054 SM00479 A1S_1054 A1S_1055 SM00257 Lysin motif A1S_1065 SM00479 A1S_1065 A1S_1067 SM00267 diguanylate cyclase A1S_1073 SM00235 Zinc-dependent metalloprotease A1S_1073 SM00736 Dystroglycan-type cadherin-like domains. A1S_1087 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1087 SM00895 A1S_1087 A1S_1090 SM00344 helix_turn_helix ASNC type A1S_1096 SM00342 helix_turn_helix, arabinose operon control protein A1S_1098 SM00858 A1S_1098 A1S_1100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1S_1101 SM01130 A1S_1101 A1S_1103 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1103 SM00895 A1S_1103 A1S_1113 SM00347 helix_turn_helix multiple antibiotic resistance protein A1S_1114 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1114 SM00895 A1S_1114 A1S_1124 SM00342 helix_turn_helix, arabinose operon control protein A1S_1144 SM00530 Helix-turn-helix XRE-family like proteins A1S_1170 SM00060 Fibronectin type 3 domain A1S_1176 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1S_1177 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1S_1179 SM00788 Adenylosuccinate synthetase A1S_1182 SM00100 Cyclic nucleotide-monophosphate binding domain A1S_1182 SM00419 helix_turn_helix, cAMP Regulatory protein A1S_1186 SM00382 ATPases associated with a variety of cellular activities A1S_1186 SM01086 C-terminal, D2-small domain, of ClpB protein A1S_1206 SM00487 DEAD-like helicases superfamily A1S_1206 SM00490 helicase superfamily c-terminal domain A1S_1206 SM00847 Helicase associated domain (HA2) Add an annotation A1S_1218 SM00422 helix_turn_helix, mercury resistance A1S_1225 SM00530 Helix-turn-helix XRE-family like proteins A1S_1228 SM00357 Cold shock protein domain A1S_1235 SM00840 A1S_1235 A1S_1236 SM00116 Domain in cystathionine beta-synthase and other proteins. A1S_1240 SM00382 ATPases associated with a variety of cellular activities A1S_1242 SM00382 ATPases associated with a variety of cellular activities A1S_1251 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A1S_1251 SM00534 ATPase domain of DNA mismatch repair MUTS family A1S_1254 SM00052 Putative diguanylate phosphodiesterase A1S_1259 SM00422 helix_turn_helix, mercury resistance A1S_1269 SM00796 Allophanate hydrolase subunit 1 A1S_1269 SM00797 Allophanate hydrolase subunit 2 A1S_1270 SM00878 Biotin carboxylase C-terminal domain A1S_1274 SM00829 Enoylreductase A1S_1277 SM00797 Allophanate hydrolase subunit 2 A1S_1277 SM00878 Biotin carboxylase C-terminal domain A1S_1285 SM00382 ATPases associated with a variety of cellular activities A1S_1307 SM00382 ATPases associated with a variety of cellular activities A1S_1307 SM01086 C-terminal, D2-small domain, of ClpB protein A1S_1314 SM00248 ankyrin repeats A1S_1320 SM00422 helix_turn_helix, mercury resistance A1S_1322 SM01130 A1S_1322 A1S_1324 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1324 SM00895 A1S_1324 A1S_1330 SM00342 helix_turn_helix, arabinose operon control protein A1S_1351 SM01060 A1S_1351 A1S_1355 SM00346 helix_turn_helix isocitrate lyase regulation A1S_1357 SM01005 Alanine racemase, C-terminal domain A1S_1358 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1358 SM00866 A1S_1358 A1S_1373 SM00878 Biotin carboxylase C-terminal domain A1S_1385 SM01236 A1S_1385 A1S_1386 SM01060 A1S_1386 A1S_1391 SM00344 helix_turn_helix ASNC type A1S_1393 SM00387 Histidine kinase-like ATPases A1S_1393 SM00388 His Kinase A (phosphoacceptor) domain A1S_1393 SM00448 cheY-homologous receiver domain A1S_1394 SM00421 helix_turn_helix, Lux Regulon A1S_1394 SM00448 cheY-homologous receiver domain A1S_1398 SM00382 ATPases associated with a variety of cellular activities A1S_1399 SM00062 Bacterial periplasmic substrate-binding proteins A1S_1400 SM00062 Bacterial periplasmic substrate-binding proteins A1S_1408 SM00450 Rhodanese Homology Domain A1S_1409 SM00822 A1S_1409 A1S_1415 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1427 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1S_1432 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1442 SM00062 Bacterial periplasmic substrate-binding proteins A1S_1443 SM00382 ATPases associated with a variety of cellular activities A1S_1448 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1448 SM00895 A1S_1448 A1S_1453 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1S_1465 SM00481 DNA polymerase alpha chain like domain A1S_1466 SM00870 A1S_1466 A1S_1471 SM00342 helix_turn_helix, arabinose operon control protein A1S_1474 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1S_1479 SM00100 Cyclic nucleotide-monophosphate binding domain A1S_1479 SM00419 helix_turn_helix, cAMP Regulatory protein A1S_1483 SM00382 ATPases associated with a variety of cellular activities A1S_1483 SM00930 A1S_1483 A1S_1490 SM00062 Bacterial periplasmic substrate-binding proteins A1S_1493 SM00382 ATPases associated with a variety of cellular activities A1S_1495 SM00344 helix_turn_helix ASNC type A1S_1497 SM00563 Phosphate acyltransferases A1S_1499 SM01236 A1S_1499 A1S_1511 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_1511 SM00876 Biotin and Thiamin Synthesis associated domain A1S_1515 SM00530 Helix-turn-helix XRE-family like proteins A1S_1521 SM00861 Transketolase, pyrimidine binding domain A1S_1523 SM00867 YceI-like domain A1S_1529 SM00344 helix_turn_helix ASNC type A1S_1533 SM00342 helix_turn_helix, arabinose operon control protein A1S_1535 SM00382 ATPases associated with a variety of cellular activities A1S_1539 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1S_1541 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A1S_1552 SM00470 ParB-like nuclease domain A1S_1555 SM00382 ATPases associated with a variety of cellular activities A1S_1567 SM00986 Uracil DNA glycosylase superfamily A1S_1567 SM00987 UreE urease accessory protein, C-terminal domain A1S_1572 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_1573 SM00411 bacterial (prokaryotic) histone like domain A1S_1575 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A1S_1578 SM00342 helix_turn_helix, arabinose operon control protein A1S_1582 SM00530 Helix-turn-helix XRE-family like proteins A1S_1585 SM00382 ATPases associated with a variety of cellular activities A1S_1586 SM00507 HNH nucleases A1S_1613 SM00382 ATPases associated with a variety of cellular activities A1S_1623 SM00487 DEAD-like helicases superfamily A1S_1623 SM00490 helicase superfamily c-terminal domain A1S_1623 SM00982 A1S_1623 A1S_1623 SM01058 CarD-like/TRCF domain A1S_1629 SM00271 DnaJ molecular chaperone homology domain A1S_1637 SM00411 bacterial (prokaryotic) histone like domain A1S_1640 SM00342 helix_turn_helix, arabinose operon control protein A1S_1657 SM01006 Siderophore biosynthesis protein domain A1S_1661 SM00855 Phosphoglycerate mutase family A1S_1671 SM00382 ATPases associated with a variety of cellular activities A1S_1679 SM01324 A1S_1679 A1S_1685 SM00493 A1S_1685 A1S_1686 SM00341 Helicase and RNase D C-terminal A1S_1686 SM00474 3'-5' exonuclease A1S_1690 SM00382 ATPases associated with a variety of cellular activities A1S_1695 SM00267 diguanylate cyclase A1S_1698 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_1700 SM00861 Transketolase, pyrimidine binding domain A1S_1704 SM00822 A1S_1704 A1S_1705 SM00829 Enoylreductase A1S_1707 SM00382 ATPases associated with a variety of cellular activities A1S_1708 SM00849 Metallo-beta-lactamase superfamily A1S_1713 SM00342 helix_turn_helix, arabinose operon control protein A1S_1717 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1717 SM00866 A1S_1717 A1S_1722 SM00382 ATPases associated with a variety of cellular activities A1S_1723 SM00567 E-Z type HEAT repeats A1S_1731 SM00882 Coenzyme A transferase A1S_1732 SM00882 Coenzyme A transferase A1S_1738 SM00342 helix_turn_helix, arabinose operon control protein A1S_1744 SM00903 Flavin reductase like domain A1S_1746 SM00342 helix_turn_helix, arabinose operon control protein A1S_1749 SM00382 ATPases associated with a variety of cellular activities A1S_1753 SM00448 cheY-homologous receiver domain A1S_1753 SM00862 Transcriptional regulatory protein, C terminal A1S_1754 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1S_1754 SM00387 Histidine kinase-like ATPases A1S_1754 SM00388 His Kinase A (phosphoacceptor) domain A1S_1756 SM00342 helix_turn_helix, arabinose operon control protein A1S_1758 SM00822 A1S_1758 A1S_1759 SM00822 A1S_1759 A1S_1762 SM00530 Helix-turn-helix XRE-family like proteins A1S_1764 SM00530 Helix-turn-helix XRE-family like proteins A1S_1775 SM00421 helix_turn_helix, Lux Regulon A1S_1781 SM01400 A1S_1781 A1S_1783 SM00342 helix_turn_helix, arabinose operon control protein A1S_1785 SM00382 ATPases associated with a variety of cellular activities A1S_1788 SM00829 Enoylreductase A1S_1789 SM00342 helix_turn_helix, arabinose operon control protein A1S_1807 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1807 SM00866 A1S_1807 A1S_1819 SM00822 A1S_1819 A1S_1820 SM00822 A1S_1820 A1S_1828 SM00422 helix_turn_helix, mercury resistance A1S_1840 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1840 SM00895 A1S_1840 A1S_1843 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1S_1846 SM00882 Coenzyme A transferase A1S_1847 SM00882 Coenzyme A transferase A1S_1855 SM00342 helix_turn_helix, arabinose operon control protein A1S_1856 SM00903 Flavin reductase like domain A1S_1866 SM00347 helix_turn_helix multiple antibiotic resistance protein A1S_1871 SM00855 Phosphoglycerate mutase family A1S_1875 SM00346 helix_turn_helix isocitrate lyase regulation A1S_1876 SM00849 Metallo-beta-lactamase superfamily A1S_1880 SM00564 beta-propeller repeat A1S_1882 SM00710 Parallel beta-helix repeats A1S_1890 SM00998 Adenylosuccinate lyase C-terminus A1S_1893 SM00882 Coenzyme A transferase A1S_1894 SM00882 Coenzyme A transferase A1S_1898 SM01192 A1S_1898 A1S_1898 SM01193 A1S_1898 A1S_1910 SM00382 ATPases associated with a variety of cellular activities A1S_1910 SM01086 C-terminal, D2-small domain, of ClpB protein A1S_1913 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1S_1920 SM01264 A1S_1920 A1S_1930 SM00382 ATPases associated with a variety of cellular activities A1S_1930 SM00962 SRP54-type protein, GTPase domain A1S_1930 SM00963 SRP54-type protein, helical bundle domain A1S_1935 SM00116 Domain in cystathionine beta-synthase and other proteins. A1S_1948 SM00347 helix_turn_helix multiple antibiotic resistance protein A1S_1949 SM00052 Putative diguanylate phosphodiesterase A1S_1949 SM00091 PAS domain A1S_1949 SM00267 diguanylate cyclase A1S_1958 SM00344 helix_turn_helix ASNC type A1S_1962 SM00382 ATPases associated with a variety of cellular activities A1S_1968 SM00935 Outer membrane protein (OmpH-like) A1S_1970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1S_1976 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_1977 SM00091 PAS domain A1S_1977 SM00387 Histidine kinase-like ATPases A1S_1977 SM00388 His Kinase A (phosphoacceptor) domain A1S_1978 SM00382 ATPases associated with a variety of cellular activities A1S_1978 SM00448 cheY-homologous receiver domain A1S_1993 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_1995 SM00852 Probable molybdopterin binding domain A1S_1996 SM00852 Probable molybdopterin binding domain A1S_2000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1S_2002 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1S_2006 SM00448 cheY-homologous receiver domain A1S_2006 SM01012 A1S_2006 A1S_2011 SM00878 Biotin carboxylase C-terminal domain A1S_2034 SM01040 BRO family, N-terminal domain A1S_2035 SM00507 HNH nucleases A1S_2041 SM01236 A1S_2041 A1S_2051 SM00226 Low molecular weight phosphatase family A1S_2056 SM00382 ATPases associated with a variety of cellular activities A1S_2061 SM00822 A1S_2061 A1S_2067 SM00344 helix_turn_helix ASNC type A1S_2070 SM00831 Cation transporter/ATPase, N-terminus A1S_2073 SM00382 ATPases associated with a variety of cellular activities A1S_2083 SM00344 helix_turn_helix ASNC type A1S_2084 SM00830 Chorismate mutase type II A1S_2088 SM00972 Spore Coat Protein U domain A1S_2091 SM00972 Spore Coat Protein U domain A1S_2097 SM00382 ATPases associated with a variety of cellular activities A1S_2101 SM00862 Transcriptional regulatory protein, C terminal A1S_2114 SM00853 MutL C terminal dimerisation domain A1S_2114 SM01340 A1S_2114 A1S_2120 SM00363 S4 RNA-binding domain A1S_2136 SM01230 A1S_2136 A1S_2137 SM00448 cheY-homologous receiver domain A1S_2137 SM00862 Transcriptional regulatory protein, C terminal A1S_2138 SM00387 Histidine kinase-like ATPases A1S_2138 SM00388 His Kinase A (phosphoacceptor) domain A1S_2144 SM00905 Dihydroneopterin aldolase A1S_2147 SM00903 Flavin reductase like domain A1S_2150 SM00822 A1S_2150 A1S_2152 SM00342 helix_turn_helix, arabinose operon control protein A1S_2154 SM00937 A1S_2154 A1S_2176 SM01005 Alanine racemase, C-terminal domain A1S_2178 SM00460 Transglutaminase/protease-like homologues A1S_2182 SM01228 A1S_2182 A1S_2187 SM00798 AICARFT/IMPCHase bienzyme A1S_2187 SM00851 MGS-like domain A1S_2189 SM01209 A1S_2189 A1S_2189 SM01210 A1S_2189 A1S_2192 SM00382 ATPases associated with a variety of cellular activities A1S_2192 SM00930 A1S_2192 A1S_2194 SM00849 Metallo-beta-lactamase superfamily A1S_2213 SM00972 Spore Coat Protein U domain A1S_2218 SM00972 Spore Coat Protein U domain A1S_2219 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_2219 SM00895 A1S_2219 A1S_2223 SM00342 helix_turn_helix, arabinose operon control protein A1S_2225 SM01034 Sensors of blue-light using FAD A1S_2256 SM00855 Phosphoglycerate mutase family A1S_2260 SM00487 DEAD-like helicases superfamily A1S_2260 SM00490 helicase superfamily c-terminal domain A1S_2261 SM00357 Cold shock protein domain A1S_2269 SM00382 ATPases associated with a variety of cellular activities A1S_2277 SM00830 Chorismate mutase type II A1S_2287 SM00387 Histidine kinase-like ATPases A1S_2287 SM00388 His Kinase A (phosphoacceptor) domain A1S_2288 SM00448 cheY-homologous receiver domain A1S_2288 SM00862 Transcriptional regulatory protein, C terminal A1S_2290 SM00382 ATPases associated with a variety of cellular activities A1S_2295 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_2299 SM00382 ATPases associated with a variety of cellular activities A1S_2302 SM00062 Bacterial periplasmic substrate-binding proteins A1S_2309 SM00479 A1S_2309 A1S_2311 SM00382 ATPases associated with a variety of cellular activities A1S_2320 SM00342 helix_turn_helix, arabinose operon control protein A1S_2329 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_2334 SM00996 S-adenosyl-L-homocysteine hydrolase A1S_2334 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A1S_2337 SM00052 Putative diguanylate phosphodiesterase A1S_2337 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1S_2337 SM00091 PAS domain A1S_2337 SM00267 diguanylate cyclase A1S_2338 SM00919 Malic enzyme, NAD binding domain A1S_2338 SM01274 A1S_2338 A1S_2340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1S_2352 SM01230 A1S_2352 A1S_2361 SM00463 Small MutS-related domain A1S_2364 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A1S_2365 SM01092 CO dehydrogenase flavoprotein C-terminal domain A1S_2375 SM00382 ATPases associated with a variety of cellular activities A1S_2387 SM00382 ATPases associated with a variety of cellular activities A1S_2398 SM00342 helix_turn_helix, arabinose operon control protein A1S_2404 SM00020 Trypsin-like serine protease A1S_2419 SM00841 Elongation factor P, C-terminal A1S_2419 SM01185 A1S_2419 A1S_2422 SM00052 Putative diguanylate phosphodiesterase A1S_2432 SM00257 Lysin motif A1S_2435 SM00936 Penicillin-binding protein 5, C-terminal domain A1S_2445 SM00382 ATPases associated with a variety of cellular activities A1S_2451 SM00344 helix_turn_helix ASNC type A1S_2462 SM00487 DEAD-like helicases superfamily A1S_2462 SM00490 helicase superfamily c-terminal domain A1S_2467 SM00880 A1S_2467 A1S_2467 SM01118 A1S_2467 A1S_2475 SM01329 A1S_2475 A1S_2497 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1S_2501 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1S_2504 SM00487 DEAD-like helicases superfamily A1S_2504 SM00490 helicase superfamily c-terminal domain A1S_2506 SM00267 diguanylate cyclase A1S_2519 SM00358 Double-stranded RNA binding motif A1S_2519 SM00535 Ribonuclease III family A1S_2522 SM00838 Elongation factor G C-terminus A1S_2525 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1S_2536 SM00382 ATPases associated with a variety of cellular activities A1S_2552 SM00382 ATPases associated with a variety of cellular activities A1S_2559 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A1S_2561 SM00382 ATPases associated with a variety of cellular activities A1S_2570 SM01006 Siderophore biosynthesis protein domain A1S_2575 SM00823 Phosphopantetheine attachment site A1S_2582 SM00342 helix_turn_helix, arabinose operon control protein A1S_2585 SM01211 A1S_2585 A1S_2586 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1S_2587 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1S_2588 SM00382 ATPases associated with a variety of cellular activities A1S_2610 SM00849 Metallo-beta-lactamase superfamily A1S_2611 SM00382 ATPases associated with a variety of cellular activities A1S_2626 SM00434 DNA Topoisomerase IV A1S_2627 SM00893 Electron transfer flavoprotein domain A1S_2628 SM00893 Electron transfer flavoprotein domain A1S_2634 SM00382 ATPases associated with a variety of cellular activities A1S_2635 SM00978 A1S_2635 A1S_2662 SM00849 Metallo-beta-lactamase superfamily A1S_2665 SM00883 Chaperonin 10 Kd subunit A1S_2667 SM00046 Diacylglycerol kinase catalytic domain (presumed) A1S_2681 SM00382 ATPases associated with a variety of cellular activities A1S_2683 SM01103 A1S_2683 A1S_2686 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A1S_2687 SM00851 MGS-like domain A1S_2687 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A1S_2694 SM00854 Bacterial capsule synthesis protein PGA_cap A1S_2708 SM00450 Rhodanese Homology Domain A1S_2715 SM00861 Transketolase, pyrimidine binding domain A1S_2719 SM00881 CoA binding domain A1S_2734 SM00014 Acid phosphatase homologues A1S_2740 SM00822 A1S_2740 A1S_2750 SM00387 Histidine kinase-like ATPases A1S_2750 SM00388 His Kinase A (phosphoacceptor) domain A1S_2751 SM00448 cheY-homologous receiver domain A1S_2751 SM00862 Transcriptional regulatory protein, C terminal A1S_2755 SM00563 Phosphate acyltransferases A1S_2758 SM00244 prohibitin homologues A1S_2766 SM00829 Enoylreductase A1S_2767 SM00342 helix_turn_helix, arabinose operon control protein A1S_2771 SM00342 helix_turn_helix, arabinose operon control protein A1S_2777 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_2784 SM00845 GatB domain A1S_2811 SM00073 Histidine Phosphotransfer domain A1S_2811 SM00260 Two component signalling adaptor domain A1S_2811 SM00387 Histidine kinase-like ATPases A1S_2811 SM00448 cheY-homologous receiver domain A1S_2811 SM01231 A1S_2811 A1S_2812 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1S_2813 SM00260 Two component signalling adaptor domain A1S_2814 SM00448 cheY-homologous receiver domain A1S_2815 SM00448 cheY-homologous receiver domain A1S_2826 SM00671 Sel1-like repeats. A1S_2831 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A1S_2831 SM01232 A1S_2831 A1S_2835 SM00838 Elongation factor G C-terminus A1S_2847 SM00564 beta-propeller repeat A1S_2848 SM00564 beta-propeller repeat A1S_2851 SM00342 helix_turn_helix, arabinose operon control protein A1S_2862 SM00957 SecA DEAD-like domain A1S_2862 SM00958 SecA preprotein cross-linking domain A1S_2871 SM00342 helix_turn_helix, arabinose operon control protein A1S_2883 SM00448 cheY-homologous receiver domain A1S_2883 SM00862 Transcriptional regulatory protein, C terminal A1S_2884 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1S_2884 SM00387 Histidine kinase-like ATPases A1S_2884 SM00388 His Kinase A (phosphoacceptor) domain A1S_2906 SM00387 Histidine kinase-like ATPases A1S_2906 SM00388 His Kinase A (phosphoacceptor) domain A1S_2913 SM01323 A1S_2913 A1S_2920 SM00481 DNA polymerase alpha chain like domain A1S_2924 SM00450 Rhodanese Homology Domain A1S_2937 SM00448 cheY-homologous receiver domain A1S_2937 SM00862 Transcriptional regulatory protein, C terminal A1S_2938 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1S_2938 SM00387 Histidine kinase-like ATPases A1S_2938 SM00388 His Kinase A (phosphoacceptor) domain A1S_2939 SM00746 metallochaperone-like domain A1S_2957 SM00849 Metallo-beta-lactamase superfamily A1S_2964 SM01001 AIR carboxylase A1S_2968 SM00014 Acid phosphatase homologues A1S_2982 SM01234 A1S_2982 A1S_2986 SM00267 diguanylate cyclase A1S_2989 SM00155 Phospholipase D. Active site motifs. A1S_2990 SM00563 Phosphate acyltransferases A1S_2998 SM00650 Ribosomal RNA adenine dimethylases A1S_3005 SM00878 Biotin carboxylase C-terminal domain A1S_3022 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A1S_3029 SM00729 Elongator protein 3, MiaB family, Radical SAM A1S_3039 SM00342 helix_turn_helix, arabinose operon control protein A1S_3045 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_3045 SM00955 A1S_3045 A1S_3056 SM00662 RNA polymerases D A1S_3057 SM00363 S4 RNA-binding domain A1S_3057 SM01390 A1S_3057 A1S_3070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1S_3071 SM01374 A1S_3071 A1S_3075 SM00322 K homology RNA-binding domain A1S_3077 SM01382 A1S_3077 A1S_3077 SM01383 A1S_3077 A1S_3081 SM01403 A1S_3081 A1S_3091 SM00563 Phosphate acyltransferases A1S_3095 SM00487 DEAD-like helicases superfamily A1S_3095 SM00490 helicase superfamily c-terminal domain A1S_3103 SM00382 ATPases associated with a variety of cellular activities A1S_3104 SM00487 DEAD-like helicases superfamily A1S_3104 SM00490 helicase superfamily c-terminal domain A1S_3106 SM00861 Transketolase, pyrimidine binding domain A1S_3114 SM00116 Domain in cystathionine beta-synthase and other proteins. A1S_3134 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1S_3170 SM00072 Guanylate kinase homologues. A1S_3171 SM01409 A1S_3171 A1S_3172 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1S_3172 SM00954 Region found in RelA / SpoT proteins A1S_3191 SM00965 Secretin and TonB N terminus short domain A1S_3195 SM00842 Cell division protein FtsA A1S_3221 SM00382 ATPases associated with a variety of cellular activities A1S_3223 SM00342 helix_turn_helix, arabinose operon control protein A1S_3225 SM00947 Carbonic anhydrase A1S_3227 SM00316 Ribosomal protein S1-like RNA-binding domain A1S_3227 SM00732 Likely ribonuclease with RNase H fold. A1S_3229 SM00448 cheY-homologous receiver domain A1S_3229 SM00862 Transcriptional regulatory protein, C terminal A1S_3230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1S_3230 SM00387 Histidine kinase-like ATPases A1S_3230 SM00388 His Kinase A (phosphoacceptor) domain A1S_3237 SM00474 3'-5' exonuclease A1S_3239 SM00530 Helix-turn-helix XRE-family like proteins A1S_3243 SM00357 Cold shock protein domain A1S_3247 SM00342 helix_turn_helix, arabinose operon control protein A1S_3252 SM00477 DNA/RNA non-specific endonuclease A1S_3252 SM00892 DNA/RNA non-specific endonuclease A1S_3255 SM00342 helix_turn_helix, arabinose operon control protein A1S_3265 SM00342 helix_turn_helix, arabinose operon control protein A1S_3282 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_3284 SM00530 Helix-turn-helix XRE-family like proteins A1S_3293 SM00829 Enoylreductase A1S_3296 SM00267 diguanylate cyclase A1S_3302 SM00387 Histidine kinase-like ATPases A1S_3302 SM00388 His Kinase A (phosphoacceptor) domain A1S_3302 SM00448 cheY-homologous receiver domain A1S_3304 SM00421 helix_turn_helix, Lux Regulon A1S_3304 SM00448 cheY-homologous receiver domain A1S_3307 SM00344 helix_turn_helix ASNC type A1S_3315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1S_3316 SM00937 A1S_3316 A1S_3321 SM00116 Domain in cystathionine beta-synthase and other proteins. A1S_3321 SM01240 A1S_3321 A1S_3323 SM00849 Metallo-beta-lactamase superfamily A1S_3331 SM00864 Tubulin/FtsZ family, GTPase domain A1S_3331 SM00865 Tubulin/FtsZ family, C-terminal domain A1S_3332 SM00842 Cell division protein FtsA A1S_3345 SM00267 diguanylate cyclase A1S_3359 SM00387 Histidine kinase-like ATPases A1S_3359 SM00433 TopoisomeraseII A1S_3363 SM00257 Lysin motif A1S_3375 SM00862 Transcriptional regulatory protein, C terminal A1S_3376 SM00387 Histidine kinase-like ATPases A1S_3376 SM00388 His Kinase A (phosphoacceptor) domain A1S_3379 SM00450 Rhodanese Homology Domain A1S_3381 SM00248 ankyrin repeats A1S_3382 SM01060 A1S_3382 A1S_3409 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_3409 SM00866 A1S_3409 A1S_3411 SM00833 Cobalamin synthesis protein cobW C-terminal domain A1S_3417 SM00346 helix_turn_helix isocitrate lyase regulation A1S_3423 SM01130 A1S_3423 A1S_3427 SM00382 ATPases associated with a variety of cellular activities A1S_3432 SM00478 endonuclease III A1S_3432 SM00525 A1S_3432 A1S_3436 SM00829 Enoylreductase A1S_3437 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1S_3443 SM00271 DnaJ molecular chaperone homology domain A1S_3465 SM00671 Sel1-like repeats. A1S_3466 SM00857 Resolvase, N terminal domain A1S_3468 SM00530 Helix-turn-helix XRE-family like proteins A1S_3529 SM00470 ParB-like nuclease domain A1S_3544 SM00507 HNH nucleases A1S_3612 SM00507 HNH nucleases A1S_3643 SM00271 DnaJ molecular chaperone homology domain A1S_3686 SM00530 Helix-turn-helix XRE-family like proteins A1S_3850 SM00899 A1S_3850 A1S_3854 SM00271 DnaJ molecular chaperone homology domain A1S_3866 SM00235 Zinc-dependent metalloprotease A1S_3887 SM00671 Sel1-like repeats.