locus-tag class description AUO97_00030 PF04076 Bacterial OB fold (BOF) protein AUO97_00060 PF00324 Amino acid permease AUO97_00065 PF00171 Aldehyde dehydrogenase family AUO97_00070 PF00202 Aminotransferase class-III AUO97_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_00075 PF03466 LysR substrate binding domain AUO97_00100 PF03793 PASTA domain AUO97_00100 PF00069 Protein kinase domain AUO97_00120 PF00814 Glycoprotease family AUO97_00125 PF01165 Ribosomal protein S21 AUO97_00130 PF09424 Yqey-like protein AUO97_00135 PF01435 Peptidase family M48 AUO97_00140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUO97_00140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUO97_00155 PF00156 Phosphoribosyl transferase domain AUO97_00160 PF02674 Colicin V production protein AUO97_00165 PF01180 Dihydroorotate dehydrogenase AUO97_00185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AUO97_00185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AUO97_00190 PF00881 Nitroreductase family AUO97_00200 PF00271 Helicase conserved C-terminal domain AUO97_00200 PF00270 DEAD/DEAH box helicase AUO97_00205 PF00313 'Cold-shock' DNA-binding domain AUO97_00215 PF00140 Sigma-70 factor, region 1.2 AUO97_00215 PF04542 Sigma-70 region 2 AUO97_00215 PF04545 Sigma-70, region 4 AUO97_00220 PF04241 Protein of unknown function (DUF423) AUO97_00230 PF05690 Thiazole biosynthesis protein ThiG AUO97_00240 PF03883 Peroxide stress protein YaaA AUO97_00250 PF06956 Regulator of RNA terminal phosphate cyclase AUO97_00250 PF00158 Sigma-54 interaction domain AUO97_00255 PF00753 Metallo-beta-lactamase superfamily AUO97_00260 PF01139 tRNA-splicing ligase RtcB AUO97_00275 PF01137 RNA 3'-terminal phosphate cyclase AUO97_00275 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AUO97_00280 PF01546 Peptidase family M20/M25/M40 AUO97_00280 PF07687 Peptidase dimerisation domain AUO97_00290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUO97_00295 PF00800 Prephenate dehydratase AUO97_00295 PF01817 Chorismate mutase type II AUO97_00295 PF01842 ACT domain AUO97_00300 PF00756 Putative esterase AUO97_00305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_00305 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_00305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_00310 PF00375 Sodium:dicarboxylate symporter family AUO97_00320 PF00591 Glycosyl transferase family, a/b domain AUO97_00320 PF02885 Glycosyl transferase family, helical bundle domain AUO97_00325 PF07023 Protein of unknown function (DUF1315) AUO97_00330 PF01513 ATP-NAD kinase AUO97_00335 PF00905 Penicillin binding protein transpeptidase domain AUO97_00335 PF00912 Transglycosylase AUO97_00335 PF14814 Bifunctional transglycosylase second domain AUO97_00345 PF00293 NUDIX domain AUO97_00355 PF00512 His Kinase A (phospho-acceptor) domain AUO97_00355 PF08521 Two-component sensor kinase N-terminal AUO97_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_00360 PF00486 Transcriptional regulatory protein, C terminal AUO97_00360 PF00072 Response regulator receiver domain AUO97_00370 PF00437 Type II/IV secretion system protein AUO97_00380 PF01980 tRNA-methyltransferase O AUO97_00380 PF18389 TrmO C-terminal domain AUO97_00385 PF00970 Oxidoreductase FAD-binding domain AUO97_00385 PF00175 Oxidoreductase NAD-binding domain AUO97_00390 PF02567 Phenazine biosynthesis-like protein AUO97_00395 PF00392 Bacterial regulatory proteins, gntR family AUO97_00395 PF00155 Aminotransferase class I and II AUO97_00405 PF00037 4Fe-4S binding domain AUO97_00410 PF00893 Small Multidrug Resistance protein AUO97_00415 PF00005 ABC transporter AUO97_00420 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_00425 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_00430 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUO97_00435 PF03466 LysR substrate binding domain AUO97_00435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_00440 PF13533 Biotin-lipoyl like AUO97_00445 PF00873 AcrB/AcrD/AcrF family AUO97_00450 PF02321 Outer membrane efflux protein AUO97_00455 PF00464 Serine hydroxymethyltransferase AUO97_00480 PF00005 ABC transporter AUO97_00485 PF01061 ABC-2 type transporter AUO97_00490 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AUO97_00490 PF14489 QueF-like protein AUO97_00500 PF01098 Cell cycle protein AUO97_00505 PF13406 Transglycosylase SLT domain AUO97_00510 PF05036 Sporulation related domain AUO97_00510 PF03330 Lytic transglycolase AUO97_00530 PF12833 Helix-turn-helix domain AUO97_00540 PF00889 Elongation factor TS AUO97_00545 PF00318 Ribosomal protein S2 AUO97_00550 PF00557 Metallopeptidase family M24 AUO97_00560 PF07690 Major Facilitator Superfamily AUO97_00570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUO97_00570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_00575 PF04055 Radical SAM superfamily AUO97_00580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_00580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_00580 PF09317 Domain of unknown function (DUF1974) AUO97_00595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AUO97_00595 PF05221 S-adenosyl-L-homocysteine hydrolase AUO97_00600 PF02219 Methylenetetrahydrofolate reductase AUO97_00605 PF04452 RNA methyltransferase AUO97_00610 PF00563 EAL domain AUO97_00610 PF00990 Diguanylate cyclase, GGDEF domain AUO97_00610 PF03707 Bacterial signalling protein N terminal repeat AUO97_00615 PF01515 Phosphate acetyl/butaryl transferase AUO97_00615 PF03949 Malic enzyme, NAD binding domain AUO97_00615 PF00390 Malic enzyme, N-terminal domain AUO97_00620 PF01743 Poly A polymerase head domain AUO97_00620 PF12627 Probable RNA and SrmB- binding site of polymerase A AUO97_00625 PF13180 PDZ domain AUO97_00630 PF01784 NIF3 (NGG1p interacting factor 3) AUO97_00635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AUO97_00635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AUO97_00670 PF01040 UbiA prenyltransferase family AUO97_00675 PF04345 Chorismate lyase AUO97_00685 PF00854 POT family AUO97_00695 PF00117 Glutamine amidotransferase class-I AUO97_00700 PF01433 Peptidase family M1 domain AUO97_00700 PF11838 ERAP1-like C-terminal domain AUO97_00705 PF00593 TonB dependent receptor AUO97_00705 PF07715 TonB-dependent Receptor Plug Domain AUO97_00710 PF02885 Glycosyl transferase family, helical bundle domain AUO97_00710 PF00591 Glycosyl transferase family, a/b domain AUO97_00715 PF00218 Indole-3-glycerol phosphate synthase AUO97_00730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AUO97_00730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AUO97_00735 PF01799 [2Fe-2S] binding domain AUO97_00735 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_00745 PF00144 Beta-lactamase AUO97_00760 PF05675 Protein of unknown function (DUF817) AUO97_00765 PF01208 Uroporphyrinogen decarboxylase (URO-D) AUO97_00775 PF00425 chorismate binding enzyme AUO97_00785 PF00975 Thioesterase domain AUO97_00790 PF00664 ABC transporter transmembrane region AUO97_00790 PF00005 ABC transporter AUO97_00795 PF00664 ABC transporter transmembrane region AUO97_00795 PF00005 ABC transporter AUO97_00800 PF00282 Pyridoxal-dependent decarboxylase conserved domain AUO97_00805 PF00550 Phosphopantetheine attachment site AUO97_00805 PF00857 Isochorismatase family AUO97_00810 PF00501 AMP-binding enzyme AUO97_00810 PF13193 AMP-binding enzyme C-terminal domain AUO97_00815 PF00668 Condensation domain AUO97_00815 PF00501 AMP-binding enzyme AUO97_00815 PF00550 Phosphopantetheine attachment site AUO97_00820 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AUO97_00825 PF07715 TonB-dependent Receptor Plug Domain AUO97_00825 PF00593 TonB dependent receptor AUO97_00830 PF01497 Periplasmic binding protein AUO97_00835 PF00005 ABC transporter AUO97_00840 PF01032 FecCD transport family AUO97_00845 PF01032 FecCD transport family AUO97_00850 PF00975 Thioesterase domain AUO97_00850 PF00550 Phosphopantetheine attachment site AUO97_00850 PF00668 Condensation domain AUO97_00850 PF13193 AMP-binding enzyme C-terminal domain AUO97_00850 PF00501 AMP-binding enzyme AUO97_00855 PF13193 AMP-binding enzyme C-terminal domain AUO97_00855 PF00668 Condensation domain AUO97_00855 PF00550 Phosphopantetheine attachment site AUO97_00855 PF00501 AMP-binding enzyme AUO97_00865 PF13309 HTH domain AUO97_00865 PF08348 YheO-like PAS domain AUO97_00870 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_00875 PF02678 Pirin AUO97_00875 PF17954 Quercetinase C-terminal cupin domain AUO97_00910 PF12833 Helix-turn-helix domain AUO97_00910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AUO97_00915 PF01370 NAD dependent epimerase/dehydratase family AUO97_00925 PF00561 alpha/beta hydrolase fold AUO97_00930 PF00743 Flavin-binding monooxygenase-like AUO97_00940 PF03466 LysR substrate binding domain AUO97_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_00945 PF00857 Isochorismatase family AUO97_00985 PF04328 Selenoprotein, putative AUO97_00990 PF13722 5TM C-terminal transporter carbon starvation CstA AUO97_00990 PF02554 Carbon starvation protein CstA AUO97_00995 PF08207 Elongation factor P (EF-P) KOW-like domain AUO97_00995 PF01132 Elongation factor P (EF-P) OB domain AUO97_00995 PF09285 Elongation factor P, C-terminal AUO97_01000 PF04055 Radical SAM superfamily AUO97_01010 PF00563 EAL domain AUO97_01010 PF12792 CSS motif domain associated with EAL AUO97_01015 PF01197 Ribosomal protein L31 AUO97_01020 PF13593 SBF-like CPA transporter family (DUF4137) AUO97_01025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUO97_01030 PF07690 Major Facilitator Superfamily AUO97_01035 PF13654 AAA domain AUO97_01035 PF05362 Lon protease (S16) C-terminal proteolytic domain AUO97_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_01040 PF03466 LysR substrate binding domain AUO97_01045 PF01476 LysM domain AUO97_01045 PF01551 Peptidase family M23 AUO97_01050 PF01975 Survival protein SurE AUO97_01065 PF00768 D-alanyl-D-alanine carboxypeptidase AUO97_01065 PF07943 Penicillin-binding protein 5, C-terminal domain AUO97_01070 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_01085 PF04356 Protein of unknown function (DUF489) AUO97_01090 PF08328 Adenylosuccinate lyase C-terminal AUO97_01090 PF00206 Lyase AUO97_01105 PF01343 Peptidase family S49 AUO97_01105 PF08496 Peptidase family S49 N-terminal AUO97_01110 PF00005 ABC transporter AUO97_01115 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_01120 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_01125 PF12849 PBP superfamily domain AUO97_01130 PF00324 Amino acid permease AUO97_01135 PF00205 Thiamine pyrophosphate enzyme, central domain AUO97_01135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUO97_01135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUO97_01140 PF01037 Lrp/AsnC ligand binding domain AUO97_01145 PF00171 Aldehyde dehydrogenase family AUO97_01150 PF00282 Pyridoxal-dependent decarboxylase conserved domain AUO97_01155 PF00202 Aminotransferase class-III AUO97_01170 PF02525 Flavodoxin-like fold AUO97_01175 PF00487 Fatty acid desaturase AUO97_01180 PF00970 Oxidoreductase FAD-binding domain AUO97_01180 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_01180 PF00175 Oxidoreductase NAD-binding domain AUO97_01185 PF00440 Bacterial regulatory proteins, tetR family AUO97_01195 PF00271 Helicase conserved C-terminal domain AUO97_01195 PF00176 SNF2 family N-terminal domain AUO97_01195 PF12137 RNA polymerase recycling family C-terminal AUO97_01195 PF18339 RapA N-terminal Tudor like domain 1 AUO97_01195 PF18337 RapA N-terminal Tudor like domain AUO97_01200 PF00849 RNA pseudouridylate synthase AUO97_01210 PF00202 Aminotransferase class-III AUO97_01215 PF02581 Thiamine monophosphate synthase AUO97_01240 PF05193 Peptidase M16 inactive domain AUO97_01240 PF00675 Insulinase (Peptidase family M16) AUO97_01245 PF02567 Phenazine biosynthesis-like protein AUO97_01255 PF03466 LysR substrate binding domain AUO97_01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_01260 PF06779 Uncharacterised MFS-type transporter YbfB AUO97_01275 PF00180 Isocitrate/isopropylmalate dehydrogenase AUO97_01280 PF00849 RNA pseudouridylate synthase AUO97_01285 PF03971 Monomeric isocitrate dehydrogenase AUO97_01295 PF07943 Penicillin-binding protein 5, C-terminal domain AUO97_01295 PF00768 D-alanyl-D-alanine carboxypeptidase AUO97_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_01305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_01310 PF00875 DNA photolyase AUO97_01310 PF03441 FAD binding domain of DNA photolyase AUO97_01355 PF03060 Nitronate monooxygenase AUO97_01360 PF01207 Dihydrouridine synthase (Dus) AUO97_01365 PF07759 Protein of unknown function (DUF1615) AUO97_01375 PF01472 PUA domain AUO97_01375 PF00696 Amino acid kinase family AUO97_01380 PF01018 GTP1/OBG AUO97_01380 PF01926 50S ribosome-binding GTPase AUO97_01395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AUO97_01395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AUO97_01400 PF00892 EamA-like transporter family AUO97_01410 PF17757 UvrB interaction domain AUO97_01410 PF02151 UvrB/uvrC motif AUO97_01410 PF12344 Ultra-violet resistance protein B AUO97_01410 PF04851 Type III restriction enzyme, res subunit AUO97_01410 PF00271 Helicase conserved C-terminal domain AUO97_01420 PF17151 Periplasmic sensor domain AUO97_01420 PF00990 Diguanylate cyclase, GGDEF domain AUO97_01440 PF00012 Hsp70 protein AUO97_01465 PF00106 short chain dehydrogenase AUO97_01470 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AUO97_01475 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AUO97_01480 PF11967 Recombination protein O N terminal AUO97_01480 PF02565 Recombination protein O C terminal AUO97_01490 PF07650 KH domain AUO97_01490 PF01926 50S ribosome-binding GTPase AUO97_01495 PF00035 Double-stranded RNA binding motif AUO97_01495 PF14622 Ribonuclease-III-like AUO97_01505 PF10502 Signal peptidase, peptidase S26 AUO97_01510 PF06421 GTP-binding protein LepA C-terminus AUO97_01510 PF03144 Elongation factor Tu domain 2 AUO97_01510 PF00009 Elongation factor Tu GTP binding domain AUO97_01510 PF00679 Elongation factor G C-terminus AUO97_01515 PF13302 Acetyltransferase (GNAT) domain AUO97_01525 PF13180 PDZ domain AUO97_01530 PF02910 Fumarate reductase flavoprotein C-term AUO97_01530 PF00890 FAD binding domain AUO97_01540 PF02223 Thymidylate kinase AUO97_01545 PF02618 YceG-like family AUO97_01550 PF01063 Amino-transferase class IV AUO97_01565 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_01570 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_01575 PF12857 TOBE-like domain AUO97_01575 PF00005 ABC transporter AUO97_01580 PF03466 LysR substrate binding domain AUO97_01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_01590 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AUO97_01590 PF14602 Hexapeptide repeat of succinyl-transferase AUO97_01590 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_01600 PF06508 Queuosine biosynthesis protein QueC AUO97_01615 PF00578 AhpC/TSA family AUO97_01625 PF00293 NUDIX domain AUO97_01625 PF01467 Cytidylyltransferase-like AUO97_01630 PF00378 Enoyl-CoA hydratase/isomerase AUO97_01635 PF01784 NIF3 (NGG1p interacting factor 3) AUO97_01645 PF08721 TnsA endonuclease C terminal AUO97_01645 PF08722 TnsA endonuclease N terminal AUO97_01650 PF00665 Integrase core domain AUO97_01655 PF11426 Tn7 transposition regulator TnsC AUO97_01655 PF13401 AAA domain AUO97_01665 PF13737 Transposase DDE domain AUO97_01670 PF15978 Tn7-like transposition protein D AUO97_01670 PF06527 TniQ AUO97_01685 PF01527 Transposase AUO97_01715 PF00005 ABC transporter AUO97_01715 PF00664 ABC transporter transmembrane region AUO97_01715 PF03412 Peptidase C39 family AUO97_01720 PF01554 MatE AUO97_01735 PF07715 TonB-dependent Receptor Plug Domain AUO97_01735 PF00593 TonB dependent receptor AUO97_01740 PF00975 Thioesterase domain AUO97_01745 PF01648 4'-phosphopantetheinyl transferase superfamily AUO97_01745 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AUO97_01755 PF13340 Putative transposase of IS4/5 family (DUF4096) AUO97_01765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AUO97_01765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AUO97_01770 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AUO97_01775 PF00501 AMP-binding enzyme AUO97_01775 PF13193 AMP-binding enzyme C-terminal domain AUO97_01780 PF13193 AMP-binding enzyme C-terminal domain AUO97_01780 PF00975 Thioesterase domain AUO97_01780 PF00550 Phosphopantetheine attachment site AUO97_01780 PF00668 Condensation domain AUO97_01780 PF00501 AMP-binding enzyme AUO97_01785 PF00550 Phosphopantetheine attachment site AUO97_01785 PF08242 Methyltransferase domain AUO97_01785 PF00501 AMP-binding enzyme AUO97_01785 PF00668 Condensation domain AUO97_01790 PF00501 AMP-binding enzyme AUO97_01790 PF00668 Condensation domain AUO97_01790 PF00550 Phosphopantetheine attachment site AUO97_01795 PF00106 short chain dehydrogenase AUO97_01800 PF00550 Phosphopantetheine attachment site AUO97_01800 PF00857 Isochorismatase family AUO97_01805 PF00425 chorismate binding enzyme AUO97_01835 PF02769 AIR synthase related protein, C-terminal domain AUO97_01835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AUO97_01835 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AUO97_01840 PF01966 HD domain AUO97_01845 PF01330 RuvA N terminal domain AUO97_01845 PF07499 RuvA, C-terminal domain AUO97_01850 PF05496 Holliday junction DNA helicase RuvB P-loop domain AUO97_01850 PF05491 RuvB C-terminal winged helix domain AUO97_01850 PF17864 RuvB AAA lid domain AUO97_01855 PF07687 Peptidase dimerisation domain AUO97_01855 PF01546 Peptidase family M20/M25/M40 AUO97_01860 PF03061 Thioesterase superfamily AUO97_01865 PF01618 MotA/TolQ/ExbB proton channel family AUO97_01870 PF02472 Biopolymer transport protein ExbD/TolR AUO97_01880 PF07676 WD40-like Beta Propeller Repeat AUO97_01880 PF04052 TolB amino-terminal domain AUO97_01885 PF00691 OmpA family AUO97_01895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AUO97_01900 PF00588 SpoU rRNA Methylase family AUO97_01900 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUO97_01930 PF08299 Bacterial dnaA protein helix-turn-helix AUO97_01930 PF00308 Bacterial dnaA protein AUO97_01930 PF11638 DnaA N-terminal domain AUO97_01935 PF01594 AI-2E family transporter AUO97_01940 PF02769 AIR synthase related protein, C-terminal domain AUO97_01940 PF00586 AIR synthase related protein, N-terminal domain AUO97_01945 PF00551 Formyl transferase AUO97_01950 PF12697 Alpha/beta hydrolase family AUO97_01955 PF06965 Na+/H+ antiporter 1 AUO97_01955 PF01343 Peptidase family S49 AUO97_01965 PF13567 Domain of unknown function (DUF4131) AUO97_01965 PF00753 Metallo-beta-lactamase superfamily AUO97_01965 PF03772 Competence protein AUO97_01970 PF00005 ABC transporter AUO97_01975 PF02687 FtsX-like permease family AUO97_01975 PF12704 MacB-like periplasmic core domain AUO97_01985 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AUO97_01995 PF00266 Aminotransferase class-V AUO97_02005 PF13533 Biotin-lipoyl like AUO97_02025 PF00535 Glycosyl transferase family 2 AUO97_02040 PF03989 DNA gyrase C-terminal domain, beta-propeller AUO97_02040 PF00521 DNA gyrase/topoisomerase IV, subunit A AUO97_02045 PF00766 Electron transfer flavoprotein FAD-binding domain AUO97_02045 PF01012 Electron transfer flavoprotein domain AUO97_02050 PF01012 Electron transfer flavoprotein domain AUO97_02055 PF02899 Phage integrase, N-terminal SAM-like domain AUO97_02055 PF00589 Phage integrase family AUO97_02060 PF01810 LysE type translocator AUO97_02065 PF01678 Diaminopimelate epimerase AUO97_02070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AUO97_02070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AUO97_02080 PF00324 Amino acid permease AUO97_02085 PF18073 Rubredoxin metal binding domain AUO97_02095 PF00152 tRNA synthetases class II (D, K and N) AUO97_02100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUO97_02100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUO97_02100 PF11890 Domain of unknown function (DUF3410) AUO97_02105 PF06803 Protein of unknown function (DUF1232) AUO97_02110 PF02634 FdhD/NarQ family AUO97_02115 PF00384 Molybdopterin oxidoreductase AUO97_02120 PF02595 Glycerate kinase family AUO97_02135 PF00881 Nitroreductase family AUO97_02195 PF09857 Putative toxin of bacterial toxin-antitoxin pair AUO97_02205 PF00550 Phosphopantetheine attachment site AUO97_02205 PF00975 Thioesterase domain AUO97_02205 PF00501 AMP-binding enzyme AUO97_02205 PF13193 AMP-binding enzyme C-terminal domain AUO97_02205 PF00668 Condensation domain AUO97_02220 PF03449 Transcription elongation factor, N-terminal AUO97_02220 PF01272 Transcription elongation factor, GreA/GreB, C-term AUO97_02225 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUO97_02225 PF01464 Transglycosylase SLT domain AUO97_02235 PF01171 PP-loop family AUO97_02245 PF01464 Transglycosylase SLT domain AUO97_02250 PF01435 Peptidase family M48 AUO97_02260 PF00873 AcrB/AcrD/AcrF family AUO97_02265 PF03009 Glycerophosphoryl diester phosphodiesterase family AUO97_02270 PF00753 Metallo-beta-lactamase superfamily AUO97_02275 PF01219 Prokaryotic diacylglycerol kinase AUO97_02280 PF00118 TCP-1/cpn60 chaperonin family AUO97_02285 PF00166 Chaperonin 10 Kd subunit AUO97_02290 PF00149 Calcineurin-like phosphoesterase AUO97_02295 PF00781 Diacylglycerol kinase catalytic domain AUO97_02300 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AUO97_02300 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AUO97_02305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AUO97_02305 PF01266 FAD dependent oxidoreductase AUO97_02310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUO97_02310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUO97_02315 PF00083 Sugar (and other) transporter AUO97_02330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AUO97_02330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AUO97_02345 PF16655 PhoD-like phosphatase, N-terminal domain AUO97_02345 PF09423 PhoD-like phosphatase AUO97_02365 PF00809 Pterin binding enzyme AUO97_02370 PF01434 Peptidase family M41 AUO97_02370 PF06480 FtsH Extracellular AUO97_02370 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_02370 PF17862 AAA+ lid domain AUO97_02375 PF01728 FtsJ-like methyltransferase AUO97_02380 PF01985 CRS1 / YhbY (CRM) domain AUO97_02400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AUO97_02400 PF00117 Glutamine amidotransferase class-I AUO97_02405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_02405 PF02142 MGS-like domain AUO97_02405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUO97_02410 PF03449 Transcription elongation factor, N-terminal AUO97_02410 PF01272 Transcription elongation factor, GreA/GreB, C-term AUO97_02415 PF00440 Bacterial regulatory proteins, tetR family AUO97_02420 PF01042 Endoribonuclease L-PSP AUO97_02425 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_02430 PF00582 Universal stress protein family AUO97_02435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AUO97_02445 PF09587 Bacterial capsule synthesis protein PGA_cap AUO97_02460 PF00999 Sodium/hydrogen exchanger family AUO97_02465 PF04228 Putative neutral zinc metallopeptidase AUO97_02470 PF05661 Protein of unknown function (DUF808) AUO97_02475 PF00579 tRNA synthetases class I (W and Y) AUO97_02480 PF00549 CoA-ligase AUO97_02480 PF02629 CoA binding domain AUO97_02485 PF00549 CoA-ligase AUO97_02485 PF08442 ATP-grasp domain AUO97_02490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_02490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUO97_02495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUO97_02495 PF00364 Biotin-requiring enzyme AUO97_02495 PF02817 e3 binding domain AUO97_02500 PF02779 Transketolase, pyrimidine binding domain AUO97_02500 PF16870 2-oxoglutarate dehydrogenase C-terminal AUO97_02500 PF00676 Dehydrogenase E1 component AUO97_02500 PF16078 2-oxoglutarate dehydrogenase N-terminus AUO97_02510 PF13085 2Fe-2S iron-sulfur cluster binding domain AUO97_02515 PF00890 FAD binding domain AUO97_02515 PF02910 Fumarate reductase flavoprotein C-term AUO97_02520 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AUO97_02525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AUO97_02530 PF00285 Citrate synthase, C-terminal domain AUO97_02560 PF04539 Sigma-70 region 3 AUO97_02560 PF04542 Sigma-70 region 2 AUO97_02560 PF04545 Sigma-70, region 4 AUO97_02560 PF04546 Sigma-70, non-essential region AUO97_02560 PF03979 Sigma-70 factor, region 1.1 AUO97_02560 PF00140 Sigma-70 factor, region 1.2 AUO97_02565 PF04359 Protein of unknown function (DUF493) AUO97_02570 PF03099 Biotin/lipoate A/B protein ligase family AUO97_02580 PF00465 Iron-containing alcohol dehydrogenase AUO97_02585 PF13520 Amino acid permease AUO97_02590 PF03358 NADPH-dependent FMN reductase AUO97_02595 PF01638 HxlR-like helix-turn-helix AUO97_02600 PF00588 SpoU rRNA Methylase family AUO97_02605 PF10414 Sirohaem synthase dimerisation region AUO97_02605 PF14824 Sirohaem biosynthesis protein central AUO97_02605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AUO97_02610 PF02403 Seryl-tRNA synthetase N-terminal domain AUO97_02610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUO97_02620 PF03548 Outer membrane lipoprotein carrier protein LolA AUO97_02625 PF01016 Ribosomal L27 protein AUO97_02630 PF00829 Ribosomal prokaryotic L21 protein AUO97_02640 PF00348 Polyprenyl synthetase AUO97_02650 PF01569 PAP2 superfamily AUO97_02655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_02655 PF00529 HlyD membrane-fusion protein of T1SS AUO97_02660 PF00873 AcrB/AcrD/AcrF family AUO97_02665 PF02321 Outer membrane efflux protein AUO97_02670 PF01906 Putative heavy-metal-binding AUO97_02675 PF01906 Putative heavy-metal-binding AUO97_02695 PF10458 Valyl tRNA synthetase tRNA binding arm AUO97_02695 PF00133 tRNA synthetases class I (I, L, M and V) AUO97_02695 PF08264 Anticodon-binding domain of tRNA AUO97_02715 PF03466 LysR substrate binding domain AUO97_02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_02725 PF00909 Ammonium Transporter Family AUO97_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_02735 PF08521 Two-component sensor kinase N-terminal AUO97_02735 PF00512 His Kinase A (phospho-acceptor) domain AUO97_02740 PF00486 Transcriptional regulatory protein, C terminal AUO97_02740 PF00072 Response regulator receiver domain AUO97_02745 PF08019 Phosphoethanolamine transferase EptA/EptB AUO97_02745 PF00884 Sulfatase AUO97_02765 PF01734 Patatin-like phospholipase AUO97_02775 PF01145 SPFH domain / Band 7 family AUO97_02780 PF04237 YjbR AUO97_02785 PF00348 Polyprenyl synthetase AUO97_02790 PF04303 PrpF protein AUO97_02795 PF00324 Amino acid permease AUO97_02805 PF01965 DJ-1/PfpI family AUO97_02810 PF09277 Erythronolide synthase, docking AUO97_02810 PF00698 Acyl transferase domain AUO97_02810 PF16197 Ketoacyl-synthetase C-terminal extension AUO97_02810 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_02810 PF08659 KR domain AUO97_02810 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_02810 PF14765 Polyketide synthase dehydratase AUO97_02810 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_02810 PF00550 Phosphopantetheine attachment site AUO97_02810 PF08990 Erythronolide synthase docking AUO97_02815 PF12833 Helix-turn-helix domain AUO97_02815 PF06719 AraC-type transcriptional regulator N-terminus AUO97_02820 PF02673 Bacitracin resistance protein BacA AUO97_02840 PF02525 Flavodoxin-like fold AUO97_02855 PF01507 Phosphoadenosine phosphosulfate reductase family AUO97_02860 PF06974 Protein of unknown function (DUF1298) AUO97_02860 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AUO97_02865 PF10150 Ribonuclease E/G family AUO97_02865 PF00575 S1 RNA binding domain AUO97_02870 PF02545 Maf-like protein AUO97_02875 PF04093 rod shape-determining protein MreD AUO97_02880 PF04085 rod shape-determining protein MreC AUO97_02890 PF02686 Glu-tRNAGln amidotransferase C subunit AUO97_02895 PF01425 Amidase AUO97_02900 PF02637 GatB domain AUO97_02900 PF02934 GatB/GatE catalytic domain AUO97_02925 PF01431 Peptidase family M13 AUO97_02925 PF05649 Peptidase family M13 AUO97_02930 PF05992 SbmA/BacA-like family AUO97_02935 PF13291 ACT domain AUO97_02935 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_02940 PF01734 Patatin-like phospholipase AUO97_02945 PF01235 Sodium:alanine symporter family AUO97_02955 PF00881 Nitroreductase family AUO97_02960 PF07690 Major Facilitator Superfamily AUO97_02965 PF12805 FUSC-like inner membrane protein yccS AUO97_02975 PF00175 Oxidoreductase NAD-binding domain AUO97_02975 PF00667 FAD binding domain AUO97_02975 PF00258 Flavodoxin AUO97_03015 PF03734 L,D-transpeptidase catalytic domain AUO97_03015 PF17969 L,D-transpeptidase C-terminal domain AUO97_03020 PF04304 Protein of unknown function (DUF454) AUO97_03030 PF08085 Entericidin EcnA/B family AUO97_03035 PF01546 Peptidase family M20/M25/M40 AUO97_03035 PF07687 Peptidase dimerisation domain AUO97_03045 PF00072 Response regulator receiver domain AUO97_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_03045 PF01584 CheW-like domain AUO97_03045 PF01627 Hpt domain AUO97_03050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AUO97_03050 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AUO97_03055 PF01584 CheW-like domain AUO97_03060 PF00072 Response regulator receiver domain AUO97_03065 PF00072 Response regulator receiver domain AUO97_03080 PF00873 AcrB/AcrD/AcrF family AUO97_03085 PF03129 Anticodon binding domain AUO97_03085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUO97_03085 PF04073 Aminoacyl-tRNA editing domain AUO97_03090 PF07411 Domain of unknown function (DUF1508) AUO97_03095 PF08274 PhnA Zinc-Ribbon AUO97_03095 PF03831 PhnA domain AUO97_03100 PF04343 Protein of unknown function, DUF488 AUO97_03110 PF01571 Aminomethyltransferase folate-binding domain AUO97_03115 PF13098 Thioredoxin-like domain AUO97_03115 PF10411 Disulfide bond isomerase protein N-terminus AUO97_03130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_03135 PF07715 TonB-dependent Receptor Plug Domain AUO97_03135 PF00593 TonB dependent receptor AUO97_03140 PF02245 Methylpurine-DNA glycosylase (MPG) AUO97_03145 PF06827 Zinc finger found in FPG and IleRS AUO97_03145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AUO97_03145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AUO97_03160 PF01741 Large-conductance mechanosensitive channel, MscL AUO97_03170 PF00860 Permease family AUO97_03175 PF05175 Methyltransferase small domain AUO97_03175 PF08468 Methyltransferase small domain N-terminal AUO97_03180 PF00324 Amino acid permease AUO97_03185 PF01139 tRNA-splicing ligase RtcB AUO97_03195 PF00691 OmpA family AUO97_03195 PF13505 Outer membrane protein beta-barrel domain AUO97_03205 PF02803 Thiolase, C-terminal domain AUO97_03205 PF00108 Thiolase, N-terminal domain AUO97_03215 PF00893 Small Multidrug Resistance protein AUO97_03225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AUO97_03225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AUO97_03230 PF01011 PQQ enzyme repeat AUO97_03235 PF04966 Carbohydrate-selective porin, OprB family AUO97_03240 PF02515 CoA-transferase family III AUO97_03245 PF02311 AraC-like ligand binding domain AUO97_03245 PF12833 Helix-turn-helix domain AUO97_03250 PF00108 Thiolase, N-terminal domain AUO97_03250 PF02803 Thiolase, C-terminal domain AUO97_03255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUO97_03255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUO97_03255 PF00378 Enoyl-CoA hydratase/isomerase AUO97_03270 PF13673 Acetyltransferase (GNAT) domain AUO97_03280 PF03006 Haemolysin-III related AUO97_03285 PF00083 Sugar (and other) transporter AUO97_03285 PF07690 Major Facilitator Superfamily AUO97_03295 PF01043 SecA preprotein cross-linking domain AUO97_03295 PF07516 SecA Wing and Scaffold domain AUO97_03295 PF02810 SEC-C motif AUO97_03295 PF07517 SecA DEAD-like domain AUO97_03300 PF10417 C-terminal domain of 1-Cys peroxiredoxin AUO97_03300 PF00578 AhpC/TSA family AUO97_03305 PF00753 Metallo-beta-lactamase superfamily AUO97_03320 PF02875 Mur ligase family, glutamate ligase domain AUO97_03320 PF08245 Mur ligase middle domain AUO97_03325 PF01039 Carboxyl transferase domain AUO97_03330 PF00290 Tryptophan synthase alpha chain AUO97_03355 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_03360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AUO97_03365 PF07715 TonB-dependent Receptor Plug Domain AUO97_03365 PF00593 TonB dependent receptor AUO97_03370 PF01923 Cobalamin adenosyltransferase AUO97_03390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AUO97_03395 PF00486 Transcriptional regulatory protein, C terminal AUO97_03395 PF00072 Response regulator receiver domain AUO97_03400 PF00512 His Kinase A (phospho-acceptor) domain AUO97_03400 PF00672 HAMP domain AUO97_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_03410 PF12806 Acetyl-CoA dehydrogenase C-terminal like AUO97_03410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_03410 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_03410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_03415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_03415 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_03415 PF12806 Acetyl-CoA dehydrogenase C-terminal like AUO97_03415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_03420 PF06146 Phosphate-starvation-inducible E AUO97_03440 PF07715 TonB-dependent Receptor Plug Domain AUO97_03440 PF00593 TonB dependent receptor AUO97_03450 PF01336 OB-fold nucleic acid binding domain AUO97_03450 PF02938 GAD domain AUO97_03450 PF00152 tRNA synthetases class II (D, K and N) AUO97_03465 PF02350 UDP-N-acetylglucosamine 2-epimerase AUO97_03480 PF13439 Glycosyltransferase Family 4 AUO97_03480 PF00534 Glycosyl transferases group 1 AUO97_03485 PF00535 Glycosyl transferase family 2 AUO97_03490 PF01522 Polysaccharide deacetylase AUO97_03505 PF01063 Amino-transferase class IV AUO97_03510 PF03710 Glutamate-ammonia ligase adenylyltransferase AUO97_03510 PF08335 GlnD PII-uridylyltransferase AUO97_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_03515 PF00512 His Kinase A (phospho-acceptor) domain AUO97_03515 PF07689 KaiB domain AUO97_03535 PF01272 Transcription elongation factor, GreA/GreB, C-term AUO97_03535 PF03449 Transcription elongation factor, N-terminal AUO97_03545 PF01381 Helix-turn-helix AUO97_03560 PF00589 Phage integrase family AUO97_03560 PF13356 Arm DNA-binding domain AUO97_03570 PF02547 Queuosine biosynthesis protein AUO97_03585 PF01702 Queuine tRNA-ribosyltransferase AUO97_03590 PF02699 Preprotein translocase subunit AUO97_03595 PF02355 Protein export membrane protein AUO97_03595 PF13721 SecD export protein N-terminal TM region AUO97_03595 PF07549 SecD/SecF GG Motif AUO97_03600 PF02355 Protein export membrane protein AUO97_03600 PF07549 SecD/SecF GG Motif AUO97_03605 PF02441 Flavoprotein AUO97_03605 PF04127 DNA / pantothenate metabolism flavoprotein AUO97_03610 PF04002 RadC-like JAB domain AUO97_03615 PF01062 Bestrophin, RFP-TM, chloride channel AUO97_03620 PF02811 PHP domain AUO97_03625 PF04279 Intracellular septation protein A AUO97_03630 PF03795 YCII-related domain AUO97_03640 PF01266 FAD dependent oxidoreductase AUO97_03640 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AUO97_03650 PF04461 Protein of unknown function (DUF520) AUO97_03655 PF00589 Phage integrase family AUO97_03655 PF13356 Arm DNA-binding domain AUO97_03680 PF13411 MerR HTH family regulatory protein AUO97_03695 PF07664 Ferrous iron transport protein B C terminus AUO97_03695 PF07670 Nucleoside recognition AUO97_03695 PF02421 Ferrous iron transport protein B AUO97_03705 PF00873 AcrB/AcrD/AcrF family AUO97_03710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_03730 PF00394 Multicopper oxidase AUO97_03730 PF07731 Multicopper oxidase AUO97_03730 PF07732 Multicopper oxidase AUO97_03740 PF00486 Transcriptional regulatory protein, C terminal AUO97_03740 PF00072 Response regulator receiver domain AUO97_03745 PF00672 HAMP domain AUO97_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_03745 PF00512 His Kinase A (phospho-acceptor) domain AUO97_03750 PF04945 YHS domain AUO97_03820 PF03887 YfbU domain AUO97_03855 PF03061 Thioesterase superfamily AUO97_03860 PF00085 Thioredoxin AUO97_03865 PF00561 alpha/beta hydrolase fold AUO97_03870 PF00753 Metallo-beta-lactamase superfamily AUO97_03870 PF04273 Putative phosphatase (DUF442) AUO97_03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUO97_03915 PF17152 Periplasmic sensor domain AUO97_03915 PF00990 Diguanylate cyclase, GGDEF domain AUO97_03920 PF00691 OmpA family AUO97_03920 PF01389 OmpA-like transmembrane domain AUO97_03925 PF00149 Calcineurin-like phosphoesterase AUO97_03925 PF10518 TAT (twin-arginine translocation) pathway signal sequence AUO97_03930 PF13091 PLD-like domain AUO97_03940 PF16360 GTP-binding GTPase Middle Region AUO97_03940 PF01926 50S ribosome-binding GTPase AUO97_03940 PF13167 GTP-binding GTPase N-terminal AUO97_03960 PF00149 Calcineurin-like phosphoesterase AUO97_03965 PF00398 Ribosomal RNA adenine dimethylase AUO97_03970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AUO97_03975 PF00572 Ribosomal protein L13 AUO97_03980 PF00380 Ribosomal protein S9/S16 AUO97_03985 PF00043 Glutathione S-transferase, C-terminal domain AUO97_03985 PF13417 Glutathione S-transferase, N-terminal domain AUO97_03990 PF04386 Stringent starvation protein B AUO97_04000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_04000 PF00364 Biotin-requiring enzyme AUO97_04000 PF00289 Biotin carboxylase, N-terminal domain AUO97_04000 PF02785 Biotin carboxylase C-terminal domain AUO97_04010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_04010 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_04010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_04015 PF01039 Carboxyl transferase domain AUO97_04030 PF00440 Bacterial regulatory proteins, tetR family AUO97_04030 PF17932 Tetracyclin repressor-like, C-terminal domain AUO97_04035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_04035 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_04035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_04080 PF01066 CDP-alcohol phosphatidyltransferase AUO97_04085 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AUO97_04105 PF00056 lactate/malate dehydrogenase, NAD binding domain AUO97_04105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUO97_04115 PF10145 Phage-related minor tail protein AUO97_04115 PF01551 Peptidase family M23 AUO97_04115 PF01464 Transglycosylase SLT domain AUO97_04120 PF00919 Uncharacterized protein family UPF0004 AUO97_04120 PF01938 TRAM domain AUO97_04120 PF04055 Radical SAM superfamily AUO97_04125 PF02562 PhoH-like protein AUO97_04130 PF02130 Uncharacterized protein family UPF0054 AUO97_04155 PF03358 NADPH-dependent FMN reductase AUO97_04160 PF03631 Virulence factor BrkB AUO97_04165 PF00892 EamA-like transporter family AUO97_04170 PF12833 Helix-turn-helix domain AUO97_04175 PF01557 Fumarylacetoacetate (FAA) hydrolase family AUO97_04220 PF17876 Cold shock domain AUO97_04220 PF08206 Ribonuclease B OB domain AUO97_04220 PF00773 RNB domain AUO97_04220 PF00575 S1 RNA binding domain AUO97_04220 PF08461 Ribonuclease R winged-helix domain AUO97_04225 PF01432 Peptidase family M3 AUO97_04230 PF09526 Probable metal-binding protein (DUF2387) AUO97_04260 PF03937 Flavinator of succinate dehydrogenase AUO97_04265 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_04265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_04265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_04270 PF00743 Flavin-binding monooxygenase-like AUO97_04275 PF01196 Ribosomal protein L17 AUO97_04280 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AUO97_04280 PF01000 RNA polymerase Rpb3/RpoA insert domain AUO97_04280 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AUO97_04285 PF00163 Ribosomal protein S4/S9 N-terminal domain AUO97_04285 PF01479 S4 domain AUO97_04290 PF00411 Ribosomal protein S11 AUO97_04295 PF00416 Ribosomal protein S13/S18 AUO97_04300 PF00444 Ribosomal protein L36 AUO97_04305 PF00344 SecY translocase AUO97_04310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AUO97_04315 PF00327 Ribosomal protein L30p/L7e AUO97_04320 PF03719 Ribosomal protein S5, C-terminal domain AUO97_04320 PF00333 Ribosomal protein S5, N-terminal domain AUO97_04325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AUO97_04330 PF00347 Ribosomal protein L6 AUO97_04335 PF00410 Ribosomal protein S8 AUO97_04340 PF00253 Ribosomal protein S14p/S29e AUO97_04345 PF00281 Ribosomal protein L5 AUO97_04345 PF00673 ribosomal L5P family C-terminus AUO97_04350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AUO97_04350 PF00467 KOW motif AUO97_04355 PF00238 Ribosomal protein L14p/L23e AUO97_04360 PF00366 Ribosomal protein S17 AUO97_04365 PF00831 Ribosomal L29 protein AUO97_04370 PF00252 Ribosomal protein L16p/L10e AUO97_04375 PF00189 Ribosomal protein S3, C-terminal domain AUO97_04375 PF07650 KH domain AUO97_04380 PF00237 Ribosomal protein L22p/L17e AUO97_04385 PF00203 Ribosomal protein S19 AUO97_04390 PF03947 Ribosomal Proteins L2, C-terminal domain AUO97_04390 PF00181 Ribosomal Proteins L2, RNA binding domain AUO97_04395 PF00276 Ribosomal protein L23 AUO97_04400 PF00573 Ribosomal protein L4/L1 family AUO97_04405 PF00297 Ribosomal protein L3 AUO97_04410 PF00338 Ribosomal protein S10p/S20e AUO97_04415 PF00117 Glutamine amidotransferase class-I AUO97_04420 PF01053 Cys/Met metabolism PLP-dependent enzyme AUO97_04425 PF05872 Bacterial protein of unknown function (DUF853) AUO97_04430 PF00970 Oxidoreductase FAD-binding domain AUO97_04430 PF00042 Globin AUO97_04430 PF00175 Oxidoreductase NAD-binding domain AUO97_04435 PF02082 Transcriptional regulator AUO97_04440 PF01926 50S ribosome-binding GTPase AUO97_04450 PF00375 Sodium:dicarboxylate symporter family AUO97_04460 PF01553 Acyltransferase AUO97_04475 PF17191 RecG wedge domain AUO97_04475 PF00270 DEAD/DEAH box helicase AUO97_04475 PF00271 Helicase conserved C-terminal domain AUO97_04480 PF00156 Phosphoribosyl transferase domain AUO97_04485 PF00293 NUDIX domain AUO97_04490 PF03641 Possible lysine decarboxylase AUO97_04495 PF01544 CorA-like Mg2+ transporter protein AUO97_04505 PF05494 MlaC protein AUO97_04515 PF02405 Permease MlaE AUO97_04520 PF00005 ABC transporter AUO97_04525 PF12343 Cold shock protein DEAD box A AUO97_04525 PF00271 Helicase conserved C-terminal domain AUO97_04525 PF00270 DEAD/DEAH box helicase AUO97_04525 PF03880 DbpA RNA binding domain AUO97_04530 PF00459 Inositol monophosphatase family AUO97_04535 PF02780 Transketolase, C-terminal domain AUO97_04535 PF02779 Transketolase, pyrimidine binding domain AUO97_04535 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AUO97_04540 PF00925 GTP cyclohydrolase II AUO97_04545 PF01218 Coproporphyrinogen III oxidase AUO97_04550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AUO97_04550 PF08501 Shikimate dehydrogenase substrate binding domain AUO97_04550 PF01488 Shikimate / quinate 5-dehydrogenase AUO97_04560 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_04560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_04560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_04560 PF12806 Acetyl-CoA dehydrogenase C-terminal like AUO97_04570 PF04024 PspC domain AUO97_04575 PF00571 CBS domain AUO97_04590 PF07690 Major Facilitator Superfamily AUO97_04595 PF02091 Glycyl-tRNA synthetase alpha subunit AUO97_04600 PF05746 DALR anticodon binding domain AUO97_04600 PF02092 Glycyl-tRNA synthetase beta subunit AUO97_04620 PF00892 EamA-like transporter family AUO97_04625 PF03466 LysR substrate binding domain AUO97_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_04655 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AUO97_04660 PF04996 Succinylarginine dihydrolase AUO97_04665 PF00171 Aldehyde dehydrogenase family AUO97_04670 PF04958 Arginine N-succinyltransferase beta subunit AUO97_04675 PF00202 Aminotransferase class-III AUO97_04680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AUO97_04680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AUO97_04685 PF00324 Amino acid permease AUO97_04695 PF08241 Methyltransferase domain AUO97_04715 PF13614 AAA domain AUO97_04720 PF01594 AI-2E family transporter AUO97_04725 PF00080 Copper/zinc superoxide dismutase (SODC) AUO97_04730 PF12805 FUSC-like inner membrane protein yccS AUO97_04735 PF07690 Major Facilitator Superfamily AUO97_04745 PF02525 Flavodoxin-like fold AUO97_04750 PF03992 Antibiotic biosynthesis monooxygenase AUO97_04760 PF01565 FAD binding domain AUO97_04760 PF02913 FAD linked oxidases, C-terminal domain AUO97_04765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUO97_04765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUO97_04770 PF00892 EamA-like transporter family AUO97_04775 PF00892 EamA-like transporter family AUO97_04785 PF01925 Sulfite exporter TauE/SafE AUO97_04790 PF01509 TruB family pseudouridylate synthase (N terminal domain) AUO97_04790 PF09157 Pseudouridine synthase II TruB, C-terminal AUO97_04790 PF16198 tRNA pseudouridylate synthase B C-terminal domain AUO97_04795 PF03280 Proteobacterial lipase chaperone protein AUO97_04800 PF00561 alpha/beta hydrolase fold AUO97_04805 PF01245 Ribosomal protein L19 AUO97_04810 PF01746 tRNA (Guanine-1)-methyltransferase AUO97_04815 PF05239 PRC-barrel domain AUO97_04815 PF01782 RimM N-terminal domain AUO97_04820 PF00886 Ribosomal protein S16 AUO97_04860 PF02401 LytB protein AUO97_04865 PF00625 Guanylate kinase AUO97_04870 PF01192 RNA polymerase Rpb6 AUO97_04875 PF13291 ACT domain AUO97_04875 PF02824 TGS domain AUO97_04875 PF04607 Region found in RelA / SpoT proteins AUO97_04880 PF01042 Endoribonuclease L-PSP AUO97_04885 PF04324 BFD-like [2Fe-2S] binding domain AUO97_04890 PF00210 Ferritin-like domain AUO97_04895 PF04932 O-Antigen ligase AUO97_04895 PF15864 Protein glycosylation ligase AUO97_04895 PF11846 Virulence factor membrane-bound polymerase, C-terminal AUO97_04900 PF07963 Prokaryotic N-terminal methylation motif AUO97_04900 PF00114 Pilin (bacterial filament) AUO97_04910 PF04536 TPM domain AUO97_04915 PF04011 LemA family AUO97_04925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AUO97_04925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_04930 PF04898 Glutamate synthase central domain AUO97_04930 PF00310 Glutamine amidotransferases class-II AUO97_04930 PF01493 GXGXG motif AUO97_04930 PF01645 Conserved region in glutamate synthase AUO97_04940 PF01761 3-dehydroquinate synthase AUO97_04945 PF01202 Shikimate kinase AUO97_04950 PF11741 AMIN domain AUO97_04950 PF00263 Bacterial type II and III secretion system protein AUO97_04950 PF07660 Secretin and TonB N terminus short domain AUO97_04950 PF03958 Bacterial type II/III secretion system short domain AUO97_04975 PF00905 Penicillin binding protein transpeptidase domain AUO97_04975 PF17092 Penicillin-binding protein OB-like domain AUO97_04975 PF00912 Transglycosylase AUO97_04980 PF13847 Methyltransferase domain AUO97_04990 PF00953 Glycosyl transferase family 4 AUO97_04995 PF01225 Mur ligase family, catalytic domain AUO97_04995 PF02875 Mur ligase family, glutamate ligase domain AUO97_04995 PF08245 Mur ligase middle domain AUO97_05000 PF08245 Mur ligase middle domain AUO97_05000 PF01225 Mur ligase family, catalytic domain AUO97_05000 PF02875 Mur ligase family, glutamate ligase domain AUO97_05005 PF03717 Penicillin-binding Protein dimerisation domain AUO97_05005 PF00905 Penicillin binding protein transpeptidase domain AUO97_05015 PF01795 MraW methylase family AUO97_05030 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUO97_05045 PF00324 Amino acid permease AUO97_05075 PF01545 Cation efflux family AUO97_05080 PF00873 AcrB/AcrD/AcrF family AUO97_05085 PF00529 HlyD membrane-fusion protein of T1SS AUO97_05085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_05110 PF12848 ABC transporter AUO97_05110 PF00005 ABC transporter AUO97_05115 PF01053 Cys/Met metabolism PLP-dependent enzyme AUO97_05120 PF01965 DJ-1/PfpI family AUO97_05135 PF00106 short chain dehydrogenase AUO97_05140 PF01740 STAS domain AUO97_05140 PF00916 Sulfate permease family AUO97_05145 PF17674 HHH domain AUO97_05145 PF16921 Tex protein YqgF-like domain AUO97_05145 PF09371 Tex-like protein N-terminal domain AUO97_05145 PF00575 S1 RNA binding domain AUO97_05150 PF00072 Response regulator receiver domain AUO97_05150 PF00486 Transcriptional regulatory protein, C terminal AUO97_05155 PF00512 His Kinase A (phospho-acceptor) domain AUO97_05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_05155 PF00672 HAMP domain AUO97_05160 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AUO97_05160 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AUO97_05165 PF00583 Acetyltransferase (GNAT) family AUO97_05185 PF00475 Imidazoleglycerol-phosphate dehydratase AUO97_05190 PF00117 Glutamine amidotransferase class-I AUO97_05205 PF00977 Histidine biosynthesis protein AUO97_05220 PF03992 Antibiotic biosynthesis monooxygenase AUO97_05235 PF01636 Phosphotransferase enzyme family AUO97_05240 PF00977 Histidine biosynthesis protein AUO97_05255 PF00230 Major intrinsic protein AUO97_05280 PF02705 K+ potassium transporter AUO97_05290 PF12833 Helix-turn-helix domain AUO97_05315 PF02525 Flavodoxin-like fold AUO97_05320 PF01638 HxlR-like helix-turn-helix AUO97_05350 PF01638 HxlR-like helix-turn-helix AUO97_05375 PF12833 Helix-turn-helix domain AUO97_05375 PF02311 AraC-like ligand binding domain AUO97_05400 PF03466 LysR substrate binding domain AUO97_05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_05405 PF07690 Major Facilitator Superfamily AUO97_05430 PF01593 Flavin containing amine oxidoreductase AUO97_05435 PF02678 Pirin AUO97_05435 PF05726 Pirin C-terminal cupin domain AUO97_05440 PF00857 Isochorismatase family AUO97_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_05450 PF00171 Aldehyde dehydrogenase family AUO97_05455 PF00202 Aminotransferase class-III AUO97_05460 PF00155 Aminotransferase class I and II AUO97_05460 PF00392 Bacterial regulatory proteins, gntR family AUO97_05465 PF00324 Amino acid permease AUO97_05475 PF03591 AzlC protein AUO97_05485 PF00436 Single-strand binding protein family AUO97_05490 PF07690 Major Facilitator Superfamily AUO97_05500 PF08543 Phosphomethylpyrimidine kinase AUO97_05500 PF02581 Thiamine monophosphate synthase AUO97_05500 PF03070 TENA/THI-4/PQQC family AUO97_05505 PF06942 GlpM protein AUO97_05515 PF00107 Zinc-binding dehydrogenase AUO97_05515 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_05520 PF00440 Bacterial regulatory proteins, tetR family AUO97_05520 PF16925 Tetracyclin repressor-like, C-terminal domain AUO97_05525 PF17760 UvrA interaction domain AUO97_05525 PF00005 ABC transporter AUO97_05525 PF17755 UvrA DNA-binding domain AUO97_05530 PF00990 Diguanylate cyclase, GGDEF domain AUO97_05530 PF17158 Membrane-associated sensor, integral membrane domain AUO97_05540 PF02028 BCCT, betaine/carnitine/choline family transporter AUO97_05550 PF00474 Sodium:solute symporter family AUO97_05555 PF04341 Protein of unknown function, DUF485 AUO97_05560 PF00512 His Kinase A (phospho-acceptor) domain AUO97_05560 PF01627 Hpt domain AUO97_05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_05560 PF00072 Response regulator receiver domain AUO97_05560 PF00672 HAMP domain AUO97_05570 PF00196 Bacterial regulatory proteins, luxR family AUO97_05570 PF00072 Response regulator receiver domain AUO97_05575 PF03358 NADPH-dependent FMN reductase AUO97_05580 PF00296 Luciferase-like monooxygenase AUO97_05585 PF01037 Lrp/AsnC ligand binding domain AUO97_05590 PF00857 Isochorismatase family AUO97_05595 PF00501 AMP-binding enzyme AUO97_05595 PF13193 AMP-binding enzyme C-terminal domain AUO97_05595 PF16177 Acetyl-coenzyme A synthetase N-terminus AUO97_05605 PF00924 Mechanosensitive ion channel AUO97_05615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AUO97_05620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_05630 PF00472 RF-1 domain AUO97_05630 PF03462 PCRF domain AUO97_05640 PF01368 DHH family AUO97_05640 PF02272 DHHA1 domain AUO97_05640 PF17768 RecJ OB domain AUO97_05645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AUO97_05645 PF01243 Pyridoxamine 5'-phosphate oxidase AUO97_05650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUO97_05650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUO97_05650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUO97_05650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUO97_05655 PF00478 IMP dehydrogenase / GMP reductase domain AUO97_05655 PF00571 CBS domain AUO97_05660 PF03692 Putative zinc- or iron-chelating domain AUO97_05665 PF01613 Flavin reductase like domain AUO97_05665 PF00258 Flavodoxin AUO97_05670 PF07715 TonB-dependent Receptor Plug Domain AUO97_05670 PF00593 TonB dependent receptor AUO97_05675 PF01169 Uncharacterized protein family UPF0016 AUO97_05685 PF02817 e3 binding domain AUO97_05685 PF00364 Biotin-requiring enzyme AUO97_05685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUO97_05690 PF00456 Transketolase, thiamine diphosphate binding domain AUO97_05690 PF17831 Pyruvate dehydrogenase E1 component middle domain AUO97_05695 PF01551 Peptidase family M23 AUO97_05705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AUO97_05710 PF00091 Tubulin/FtsZ family, GTPase domain AUO97_05710 PF12327 FtsZ family, C-terminal domain AUO97_05715 PF02491 SHS2 domain inserted in FTSA AUO97_05720 PF03799 Cell division protein FtsQ AUO97_05720 PF08478 POTRA domain, FtsQ-type AUO97_05725 PF01820 D-ala D-ala ligase N-terminus AUO97_05725 PF07478 D-ala D-ala ligase C-terminus AUO97_05730 PF01225 Mur ligase family, catalytic domain AUO97_05730 PF02875 Mur ligase family, glutamate ligase domain AUO97_05730 PF08245 Mur ligase middle domain AUO97_05735 PF04101 Glycosyltransferase family 28 C-terminal domain AUO97_05735 PF03033 Glycosyltransferase family 28 N-terminal domain AUO97_05740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AUO97_05740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AUO97_05750 PF00593 TonB dependent receptor AUO97_05750 PF07715 TonB-dependent Receptor Plug Domain AUO97_05760 PF00156 Phosphoribosyl transferase domain AUO97_05765 PF03372 Endonuclease/Exonuclease/phosphatase family AUO97_05770 PF03960 ArsC family AUO97_05780 PF07859 alpha/beta hydrolase fold AUO97_05785 PF07694 5TMR of 5TMR-LYT AUO97_05785 PF00990 Diguanylate cyclase, GGDEF domain AUO97_05790 PF02683 Cytochrome C biogenesis protein transmembrane region AUO97_05790 PF11412 Disulphide bond corrector protein DsbC AUO97_05820 PF00576 HIUase/Transthyretin family AUO97_05825 PF00860 Permease family AUO97_05835 PF01494 FAD binding domain AUO97_05840 PF03561 Allantoicase repeat AUO97_05845 PF04115 Ureidoglycolate lyase AUO97_05850 PF01751 Toprim domain AUO97_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_05850 PF00986 DNA gyrase B subunit, carboxyl terminus AUO97_05850 PF00204 DNA gyrase B AUO97_05855 PF05728 Uncharacterised protein family (UPF0227) AUO97_05890 PF01476 LysM domain AUO97_05890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AUO97_05910 PF00665 Integrase core domain AUO97_05910 PF13276 HTH-like domain AUO97_05910 PF13333 Integrase core domain AUO97_05985 PF01758 Sodium Bile acid symporter family AUO97_05995 PF03358 NADPH-dependent FMN reductase AUO97_06005 PF02796 Helix-turn-helix domain of resolvase AUO97_06005 PF00239 Resolvase, N terminal domain AUO97_06025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUO97_06025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUO97_06025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUO97_06025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUO97_06030 PF00809 Pterin binding enzyme AUO97_06060 PF00665 Integrase core domain AUO97_06085 PF02899 Phage integrase, N-terminal SAM-like domain AUO97_06085 PF00589 Phage integrase family AUO97_06115 PF01740 STAS domain AUO97_06115 PF00916 Sulfate permease family AUO97_06120 PF00582 Universal stress protein family AUO97_06150 PF00665 Integrase core domain AUO97_06170 PF13335 Magnesium chelatase, subunit ChlI C-terminal AUO97_06170 PF01078 Magnesium chelatase, subunit ChlI AUO97_06175 PF00155 Aminotransferase class I and II AUO97_06175 PF00392 Bacterial regulatory proteins, gntR family AUO97_06185 PF00701 Dihydrodipicolinate synthetase family AUO97_06195 PF03573 outer membrane porin, OprD family AUO97_06200 PF00719 Inorganic pyrophosphatase AUO97_06215 PF13193 AMP-binding enzyme C-terminal domain AUO97_06215 PF00501 AMP-binding enzyme AUO97_06220 PF03989 DNA gyrase C-terminal domain, beta-propeller AUO97_06220 PF00521 DNA gyrase/topoisomerase IV, subunit A AUO97_06225 PF07690 Major Facilitator Superfamily AUO97_06230 PF03458 UPF0126 domain AUO97_06235 PF02810 SEC-C motif AUO97_06240 PF03741 Integral membrane protein TerC family AUO97_06240 PF03471 Transporter associated domain AUO97_06245 PF03641 Possible lysine decarboxylase AUO97_06250 PF07690 Major Facilitator Superfamily AUO97_06260 PF11798 IMS family HHH motif AUO97_06260 PF11799 impB/mucB/samB family C-terminal domain AUO97_06260 PF00817 impB/mucB/samB family AUO97_06275 PF08497 Radical SAM N-terminal AUO97_06275 PF04055 Radical SAM superfamily AUO97_06275 PF11842 Domain of unknown function (DUF3362) AUO97_06295 PF03358 NADPH-dependent FMN reductase AUO97_06305 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_06340 PF00440 Bacterial regulatory proteins, tetR family AUO97_06365 PF01327 Polypeptide deformylase AUO97_06375 PF17782 DprA winged helix domain AUO97_06375 PF02481 DNA recombination-mediator protein A AUO97_06380 PF01300 Telomere recombination AUO97_06385 PF00892 EamA-like transporter family AUO97_06390 PF00440 Bacterial regulatory proteins, tetR family AUO97_06395 PF07690 Major Facilitator Superfamily AUO97_06405 PF00255 Glutathione peroxidase AUO97_06415 PF11008 Protein of unknown function (DUF2846) AUO97_06420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AUO97_06425 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUO97_06425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUO97_06430 PF00231 ATP synthase AUO97_06435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUO97_06435 PF00306 ATP synthase alpha/beta chain, C terminal domain AUO97_06435 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUO97_06440 PF00213 ATP synthase delta (OSCP) subunit AUO97_06445 PF00430 ATP synthase B/B' CF(0) AUO97_06450 PF00137 ATP synthase subunit C AUO97_06455 PF00119 ATP synthase A chain AUO97_06475 PF00005 ABC transporter AUO97_06480 PF00950 ABC 3 transport family AUO97_06485 PF01810 LysE type translocator AUO97_06490 PF04261 Dyp-type peroxidase family AUO97_06495 PF03949 Malic enzyme, NAD binding domain AUO97_06495 PF00390 Malic enzyme, N-terminal domain AUO97_06500 PF00750 tRNA synthetases class I (R) AUO97_06500 PF05746 DALR anticodon binding domain AUO97_06500 PF03485 Arginyl tRNA synthetase N terminal domain AUO97_06520 PF05726 Pirin C-terminal cupin domain AUO97_06520 PF02678 Pirin AUO97_06530 PF03551 Transcriptional regulator PadR-like family AUO97_06535 PF01909 Nucleotidyltransferase domain AUO97_06535 PF13427 Domain of unknown function (DUF4111) AUO97_06540 PF00117 Glutamine amidotransferase class-I AUO97_06540 PF00958 GMP synthase C terminal domain AUO97_06540 PF02540 NAD synthase AUO97_06545 PF04286 Protein of unknown function (DUF445) AUO97_06550 PF07681 DoxX AUO97_06555 PF09335 SNARE associated Golgi protein AUO97_06570 PF13614 AAA domain AUO97_06580 PF01722 BolA-like protein AUO97_06595 PF01648 4'-phosphopantetheinyl transferase superfamily AUO97_06600 PF16363 GDP-mannose 4,6 dehydratase AUO97_06615 PF13193 AMP-binding enzyme C-terminal domain AUO97_06615 PF00550 Phosphopantetheine attachment site AUO97_06615 PF00668 Condensation domain AUO97_06615 PF00975 Thioesterase domain AUO97_06615 PF00501 AMP-binding enzyme AUO97_06620 PF16197 Ketoacyl-synthetase C-terminal extension AUO97_06620 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_06620 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_06620 PF08242 Methyltransferase domain AUO97_06620 PF14765 Polyketide synthase dehydratase AUO97_06620 PF00550 Phosphopantetheine attachment site AUO97_06620 PF00975 Thioesterase domain AUO97_06625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_06625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_06625 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_06630 PF00501 AMP-binding enzyme AUO97_06635 PF00196 Bacterial regulatory proteins, luxR family AUO97_06635 PF03472 Autoinducer binding domain AUO97_06645 PF00765 Autoinducer synthase AUO97_06650 PF00083 Sugar (and other) transporter AUO97_06650 PF07690 Major Facilitator Superfamily AUO97_06655 PF00378 Enoyl-CoA hydratase/isomerase AUO97_06660 PF00378 Enoyl-CoA hydratase/isomerase AUO97_06665 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_06665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_06665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_06670 PF00501 AMP-binding enzyme AUO97_06670 PF13193 AMP-binding enzyme C-terminal domain AUO97_06675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUO97_06675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AUO97_06680 PF00171 Aldehyde dehydrogenase family AUO97_06690 PF00324 Amino acid permease AUO97_06695 PF00324 Amino acid permease AUO97_06700 PF01042 Endoribonuclease L-PSP AUO97_06705 PF00842 Alanine racemase, C-terminal domain AUO97_06705 PF01168 Alanine racemase, N-terminal domain AUO97_06710 PF01266 FAD dependent oxidoreductase AUO97_06715 PF01037 Lrp/AsnC ligand binding domain AUO97_06725 PF07715 TonB-dependent Receptor Plug Domain AUO97_06725 PF00593 TonB dependent receptor AUO97_06740 PF00849 RNA pseudouridylate synthase AUO97_06790 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_06790 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_06825 PF00694 Aconitase C-terminal domain AUO97_06825 PF00330 Aconitase family (aconitate hydratase) AUO97_06830 PF00285 Citrate synthase, C-terminal domain AUO97_06840 PF07729 FCD domain AUO97_06840 PF00392 Bacterial regulatory proteins, gntR family AUO97_06845 PF00155 Aminotransferase class I and II AUO97_06850 PF01565 FAD binding domain AUO97_06850 PF09330 D-lactate dehydrogenase, membrane binding AUO97_06855 PF01070 FMN-dependent dehydrogenase AUO97_06860 PF07729 FCD domain AUO97_06860 PF00392 Bacterial regulatory proteins, gntR family AUO97_06865 PF02652 L-lactate permease AUO97_06870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUO97_06870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUO97_06870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUO97_06870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUO97_06875 PF16363 GDP-mannose 4,6 dehydratase AUO97_06880 PF00342 Phosphoglucose isomerase AUO97_06885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AUO97_06885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AUO97_06885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AUO97_06890 PF00483 Nucleotidyl transferase AUO97_06895 PF02397 Bacterial sugar transferase AUO97_06900 PF00535 Glycosyl transferase family 2 AUO97_06905 PF00534 Glycosyl transferases group 1 AUO97_06920 PF13439 Glycosyltransferase Family 4 AUO97_06920 PF00534 Glycosyl transferases group 1 AUO97_06925 PF12464 Maltose acetyltransferase AUO97_06925 PF14602 Hexapeptide repeat of succinyl-transferase AUO97_06925 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_06935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUO97_06940 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_06945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUO97_06945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUO97_06950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AUO97_06950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AUO97_06950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AUO97_06955 PF02563 Polysaccharide biosynthesis/export protein AUO97_06955 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AUO97_06955 PF10531 SLBB domain AUO97_06960 PF01451 Low molecular weight phosphotyrosine protein phosphatase AUO97_06965 PF02706 Chain length determinant protein AUO97_06965 PF13807 G-rich domain on putative tyrosine kinase AUO97_06965 PF13614 AAA domain AUO97_06970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUO97_06970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_06975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUO97_06975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_06980 PF03023 Lipid II flippase MurJ AUO97_06985 PF01510 N-acetylmuramoyl-L-alanine amidase AUO97_06990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AUO97_06990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AUO97_06995 PF05506 Domain of unknown function (DUF756) AUO97_06995 PF04185 Phosphoesterase family AUO97_07000 PF01138 3' exoribonuclease family, domain 1 AUO97_07000 PF03725 3' exoribonuclease family, domain 2 AUO97_07005 PF00487 Fatty acid desaturase AUO97_07010 PF00175 Oxidoreductase NAD-binding domain AUO97_07015 PF00440 Bacterial regulatory proteins, tetR family AUO97_07020 PF00440 Bacterial regulatory proteins, tetR family AUO97_07020 PF08360 QacR-like protein, C-terminal region AUO97_07025 PF01323 DSBA-like thioredoxin domain AUO97_07035 PF13419 Haloacid dehalogenase-like hydrolase AUO97_07040 PF00106 short chain dehydrogenase AUO97_07055 PF00583 Acetyltransferase (GNAT) family AUO97_07055 PF00696 Amino acid kinase family AUO97_07060 PF09084 NMT1/THI5 like AUO97_07065 PF09084 NMT1/THI5 like AUO97_07070 PF00296 Luciferase-like monooxygenase AUO97_07075 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_07080 PF00005 ABC transporter AUO97_07085 PF00440 Bacterial regulatory proteins, tetR family AUO97_07085 PF08362 YcdC-like protein, C-terminal region AUO97_07090 PF01048 Phosphorylase superfamily AUO97_07100 PF01687 Riboflavin kinase AUO97_07100 PF06574 FAD synthetase AUO97_07105 PF00133 tRNA synthetases class I (I, L, M and V) AUO97_07105 PF08264 Anticodon-binding domain of tRNA AUO97_07105 PF06827 Zinc finger found in FPG and IleRS AUO97_07110 PF01252 Signal peptidase (SPase) II AUO97_07115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_07155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUO97_07160 PF07859 alpha/beta hydrolase fold AUO97_07180 PF03466 LysR substrate binding domain AUO97_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_07185 PF01025 GrpE AUO97_07190 PF00012 Hsp70 protein AUO97_07210 PF13406 Transglycosylase SLT domain AUO97_07215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AUO97_07215 PF02222 ATP-grasp domain AUO97_07220 PF00731 AIR carboxylase AUO97_07235 PF08245 Mur ligase middle domain AUO97_07235 PF01225 Mur ligase family, catalytic domain AUO97_07235 PF02875 Mur ligase family, glutamate ligase domain AUO97_07245 PF01569 PAP2 superfamily AUO97_07250 PF03741 Integral membrane protein TerC family AUO97_07260 PF03738 Glutathionylspermidine synthase preATP-grasp AUO97_07265 PF00355 Rieske [2Fe-2S] domain AUO97_07270 PF01979 Amidohydrolase family AUO97_07275 PF00156 Phosphoribosyl transferase domain AUO97_07285 PF13098 Thioredoxin-like domain AUO97_07285 PF10411 Disulfide bond isomerase protein N-terminus AUO97_07290 PF16916 Dimerisation domain of Zinc Transporter AUO97_07290 PF01545 Cation efflux family AUO97_07295 PF02583 Metal-sensitive transcriptional repressor AUO97_07300 PF10396 GTP-binding protein TrmE N-terminus AUO97_07300 PF01926 50S ribosome-binding GTPase AUO97_07300 PF12631 MnmE helical domain AUO97_07305 PF02096 60Kd inner membrane protein AUO97_07305 PF14849 YidC periplasmic domain AUO97_07310 PF01809 Putative membrane protein insertion efficiency factor AUO97_07315 PF00825 Ribonuclease P AUO97_07320 PF00468 Ribosomal protein L34 AUO97_07325 PF11638 DnaA N-terminal domain AUO97_07325 PF00308 Bacterial dnaA protein AUO97_07325 PF08299 Bacterial dnaA protein helix-turn-helix AUO97_07330 PF00712 DNA polymerase III beta subunit, N-terminal domain AUO97_07330 PF02767 DNA polymerase III beta subunit, central domain AUO97_07330 PF02768 DNA polymerase III beta subunit, C-terminal domain AUO97_07335 PF02463 RecF/RecN/SMC N terminal domain AUO97_07340 PF18053 DNA gyrase B subunit insert domain AUO97_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_07340 PF01751 Toprim domain AUO97_07340 PF00204 DNA gyrase B AUO97_07340 PF00986 DNA gyrase B subunit, carboxyl terminus AUO97_07350 PF09335 SNARE associated Golgi protein AUO97_07355 PF12848 ABC transporter AUO97_07355 PF00005 ABC transporter AUO97_07375 PF01521 Iron-sulphur cluster biosynthesis AUO97_07380 PF00561 alpha/beta hydrolase fold AUO97_07385 PF03702 Anhydro-N-acetylmuramic acid kinase AUO97_07390 PF00579 tRNA synthetases class I (W and Y) AUO97_07430 PF00209 Sodium:neurotransmitter symporter family AUO97_07440 PF01189 16S rRNA methyltransferase RsmB/F AUO97_07440 PF01029 NusB family AUO97_07445 PF02911 Formyl transferase, C-terminal domain AUO97_07445 PF00551 Formyl transferase AUO97_07450 PF00920 Dehydratase family AUO97_07465 PF03466 LysR substrate binding domain AUO97_07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_07470 PF00860 Permease family AUO97_07475 PF00311 Phosphoenolpyruvate carboxylase AUO97_07480 PF08361 MAATS-type transcriptional repressor, C-terminal region AUO97_07480 PF00440 Bacterial regulatory proteins, tetR family AUO97_07485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_07490 PF00873 AcrB/AcrD/AcrF family AUO97_07500 PF00684 DnaJ central domain AUO97_07500 PF01556 DnaJ C terminal domain AUO97_07500 PF00226 DnaJ domain AUO97_07510 PF05173 Dihydrodipicolinate reductase, C-terminus AUO97_07510 PF01113 Dihydrodipicolinate reductase, N-terminus AUO97_07520 PF07690 Major Facilitator Superfamily AUO97_07525 PF00248 Aldo/keto reductase family AUO97_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_07530 PF03466 LysR substrate binding domain AUO97_07540 PF00155 Aminotransferase class I and II AUO97_07540 PF00392 Bacterial regulatory proteins, gntR family AUO97_07545 PF00107 Zinc-binding dehydrogenase AUO97_07545 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_07550 PF03352 Methyladenine glycosylase AUO97_07565 PF10576 Iron-sulfur binding domain of endonuclease III AUO97_07565 PF00730 HhH-GPD superfamily base excision DNA repair protein AUO97_07565 PF00633 Helix-hairpin-helix motif AUO97_07565 PF14815 NUDIX domain AUO97_07580 PF07043 Protein of unknown function (DUF1328) AUO97_07585 PF03692 Putative zinc- or iron-chelating domain AUO97_07590 PF07995 Glucose / Sorbosone dehydrogenase AUO97_07595 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_07595 PF16193 AAA C-terminal domain AUO97_07595 PF12002 MgsA AAA+ ATPase C terminal AUO97_07600 PF01226 Formate/nitrite transporter AUO97_07610 PF01259 SAICAR synthetase AUO97_07620 PF00701 Dihydrodipicolinate synthetase family AUO97_07625 PF00857 Isochorismatase family AUO97_07630 PF01758 Sodium Bile acid symporter family AUO97_07635 PF01554 MatE AUO97_07640 PF04463 Protein of unknown function (DUF523) AUO97_07645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUO97_07655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUO97_07660 PF14497 Glutathione S-transferase, C-terminal domain AUO97_07660 PF02798 Glutathione S-transferase, N-terminal domain AUO97_07670 PF00324 Amino acid permease AUO97_07680 PF07683 Cobalamin synthesis protein cobW C-terminal domain AUO97_07680 PF02492 CobW/HypB/UreG, nucleotide-binding domain AUO97_07690 PF00392 Bacterial regulatory proteins, gntR family AUO97_07690 PF07702 UTRA domain AUO97_07695 PF05962 HutD AUO97_07700 PF17391 Urocanase N-terminal domain AUO97_07700 PF17392 Urocanase C-terminal domain AUO97_07700 PF01175 Urocanase Rossmann-like domain AUO97_07705 PF00221 Aromatic amino acid lyase AUO97_07710 PF00324 Amino acid permease AUO97_07715 PF01979 Amidohydrolase family AUO97_07720 PF00491 Arginase family AUO97_07735 PF01177 Asp/Glu/Hydantoin racemase AUO97_07740 PF01810 LysE type translocator AUO97_07760 PF01380 SIS domain AUO97_07765 PF12804 MobA-like NTP transferase domain AUO97_07765 PF14602 Hexapeptide repeat of succinyl-transferase AUO97_07765 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_07770 PF04608 Phosphatidylglycerophosphatase A AUO97_07775 PF00586 AIR synthase related protein, N-terminal domain AUO97_07775 PF02769 AIR synthase related protein, C-terminal domain AUO97_07780 PF01029 NusB family AUO97_07785 PF00885 6,7-dimethyl-8-ribityllumazine synthase AUO97_07790 PF00925 GTP cyclohydrolase II AUO97_07790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AUO97_07820 PF02580 D-Tyr-tRNA(Tyr) deacylase AUO97_07825 PF06628 Catalase-related immune-responsive AUO97_07825 PF00199 Catalase AUO97_07835 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AUO97_07835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AUO97_07840 PF00581 Rhodanese-like domain AUO97_07845 PF02666 Phosphatidylserine decarboxylase AUO97_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_07855 PF00512 His Kinase A (phospho-acceptor) domain AUO97_07855 PF11808 Phosphate regulon sensor protein PhoR AUO97_07855 PF00989 PAS fold AUO97_07860 PF00486 Transcriptional regulatory protein, C terminal AUO97_07860 PF00072 Response regulator receiver domain AUO97_07870 PF00106 short chain dehydrogenase AUO97_07875 PF01554 MatE AUO97_07880 PF00155 Aminotransferase class I and II AUO97_07885 PF04286 Protein of unknown function (DUF445) AUO97_07900 PF04262 Glutamate-cysteine ligase AUO97_07905 PF02600 Disulfide bond formation protein DsbB AUO97_07915 PF13333 Integrase core domain AUO97_07915 PF00665 Integrase core domain AUO97_07915 PF13276 HTH-like domain AUO97_07945 PF07670 Nucleoside recognition AUO97_07945 PF07664 Ferrous iron transport protein B C terminus AUO97_07945 PF02421 Ferrous iron transport protein B AUO97_07970 PF01751 Toprim domain AUO97_07970 PF01131 DNA topoisomerase AUO97_07970 PF01396 Topoisomerase DNA binding C4 zinc finger AUO97_08050 PF00565 Staphylococcal nuclease homologue AUO97_08185 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AUO97_08185 PF00437 Type II/IV secretion system protein AUO97_08235 PF13614 AAA domain AUO97_08240 PF02195 ParB-like nuclease domain AUO97_08240 PF17762 HTH domain found in ParB protein AUO97_08250 PF00817 impB/mucB/samB family AUO97_08250 PF11799 impB/mucB/samB family C-terminal domain AUO97_08250 PF13438 Domain of unknown function (DUF4113) AUO97_08250 PF11798 IMS family HHH motif AUO97_08255 PF00717 Peptidase S24-like AUO97_08280 PF04225 Opacity-associated protein A LysM-like domain AUO97_08280 PF01551 Peptidase family M23 AUO97_08400 PF13737 Transposase DDE domain AUO97_08460 PF01435 Peptidase family M48 AUO97_08490 PF00665 Integrase core domain AUO97_08520 PF00582 Universal stress protein family AUO97_08525 PF01740 STAS domain AUO97_08525 PF00916 Sulfate permease family AUO97_08535 PF01078 Magnesium chelatase, subunit ChlI AUO97_08535 PF13335 Magnesium chelatase, subunit ChlI C-terminal AUO97_08545 PF00543 Nitrogen regulatory protein P-II AUO97_08550 PF00909 Ammonium Transporter Family AUO97_08555 PF03477 ATP cone domain AUO97_08560 PF01872 RibD C-terminal domain AUO97_08560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUO97_08570 PF00677 Lumazine binding domain AUO97_08590 PF02789 Cytosol aminopeptidase family, N-terminal domain AUO97_08590 PF00883 Cytosol aminopeptidase family, catalytic domain AUO97_08600 PF03739 Lipopolysaccharide export system permease LptF/LptG AUO97_08605 PF01676 Metalloenzyme superfamily AUO97_08605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AUO97_08610 PF00595 PDZ domain AUO97_08610 PF03572 Peptidase family S41 AUO97_08615 PF02954 Bacterial regulatory protein, Fis family AUO97_08615 PF00158 Sigma-54 interaction domain AUO97_08615 PF00072 Response regulator receiver domain AUO97_08620 PF00512 His Kinase A (phospho-acceptor) domain AUO97_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_08625 PF00196 Bacterial regulatory proteins, luxR family AUO97_08625 PF00072 Response regulator receiver domain AUO97_08630 PF00768 D-alanyl-D-alanine carboxypeptidase AUO97_08635 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_08640 PF00742 Homoserine dehydrogenase AUO97_08640 PF01842 ACT domain AUO97_08640 PF03447 Homoserine dehydrogenase, NAD binding domain AUO97_08645 PF10411 Disulfide bond isomerase protein N-terminus AUO97_08645 PF13098 Thioredoxin-like domain AUO97_08650 PF02899 Phage integrase, N-terminal SAM-like domain AUO97_08650 PF00589 Phage integrase family AUO97_08660 PF02421 Ferrous iron transport protein B AUO97_08660 PF07670 Nucleoside recognition AUO97_08660 PF07664 Ferrous iron transport protein B C terminus AUO97_08670 PF08245 Mur ligase middle domain AUO97_08670 PF02875 Mur ligase family, glutamate ligase domain AUO97_08675 PF01098 Cell cycle protein AUO97_08680 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUO97_08685 PF01258 Prokaryotic dksA/traR C4-type zinc finger AUO97_08690 PF00149 Calcineurin-like phosphoesterase AUO97_08695 PF00293 NUDIX domain AUO97_08700 PF13667 ThiC-associated domain AUO97_08700 PF01964 Radical SAM ThiC family AUO97_08715 PF00892 EamA-like transporter family AUO97_08720 PF02321 Outer membrane efflux protein AUO97_08725 PF01895 PhoU domain AUO97_08730 PF04362 Bacterial Fe(2+) trafficking AUO97_08735 PF14698 Argininosuccinate lyase C-terminal AUO97_08735 PF00206 Lyase AUO97_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_08740 PF07694 5TMR of 5TMR-LYT AUO97_08740 PF06580 Histidine kinase AUO97_08745 PF04397 LytTr DNA-binding domain AUO97_08745 PF00072 Response regulator receiver domain AUO97_08750 PF03900 Porphobilinogen deaminase, C-terminal domain AUO97_08750 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AUO97_08775 PF00816 H-NS histone family AUO97_08790 PF03958 Bacterial type II/III secretion system short domain AUO97_08790 PF00263 Bacterial type II and III secretion system protein AUO97_08795 PF00498 FHA domain AUO97_08795 PF12401 Protein of unknown function (DUF2662) AUO97_08800 PF13419 Haloacid dehalogenase-like hydrolase AUO97_08805 PF00425 chorismate binding enzyme AUO97_08805 PF04715 Anthranilate synthase component I, N terminal region AUO97_08830 PF00009 Elongation factor Tu GTP binding domain AUO97_08830 PF03144 Elongation factor Tu domain 2 AUO97_08830 PF03143 Elongation factor Tu C-terminal domain AUO97_08840 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AUO97_08845 PF02357 Transcription termination factor nusG AUO97_08845 PF00467 KOW motif AUO97_08850 PF00298 Ribosomal protein L11, RNA binding domain AUO97_08850 PF03946 Ribosomal protein L11, N-terminal domain AUO97_08855 PF00687 Ribosomal protein L1p/L10e family AUO97_08860 PF00466 Ribosomal protein L10 AUO97_08865 PF00542 Ribosomal protein L7/L12 C-terminal domain AUO97_08865 PF16320 Ribosomal protein L7/L12 dimerisation domain AUO97_08870 PF04560 RNA polymerase Rpb2, domain 7 AUO97_08870 PF00562 RNA polymerase Rpb2, domain 6 AUO97_08870 PF10385 RNA polymerase beta subunit external 1 domain AUO97_08870 PF04565 RNA polymerase Rpb2, domain 3 AUO97_08870 PF04561 RNA polymerase Rpb2, domain 2 AUO97_08870 PF04563 RNA polymerase beta subunit AUO97_08875 PF04997 RNA polymerase Rpb1, domain 1 AUO97_08875 PF04983 RNA polymerase Rpb1, domain 3 AUO97_08875 PF04998 RNA polymerase Rpb1, domain 5 AUO97_08875 PF00623 RNA polymerase Rpb1, domain 2 AUO97_08875 PF05000 RNA polymerase Rpb1, domain 4 AUO97_08895 PF00561 alpha/beta hydrolase fold AUO97_08900 PF13726 Na+-H+ antiporter family AUO97_08900 PF03553 Na+/H+ antiporter family AUO97_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_08915 PF00183 Hsp90 protein AUO97_08930 PF01323 DSBA-like thioredoxin domain AUO97_08940 PF00376 MerR family regulatory protein AUO97_08940 PF09278 MerR, DNA binding AUO97_08965 PF00108 Thiolase, N-terminal domain AUO97_08965 PF02803 Thiolase, C-terminal domain AUO97_08970 PF00378 Enoyl-CoA hydratase/isomerase AUO97_08970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUO97_08970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUO97_08985 PF08459 UvrC Helix-hairpin-helix N-terminal AUO97_08985 PF02151 UvrB/uvrC motif AUO97_08985 PF01541 GIY-YIG catalytic domain AUO97_08995 PF01066 CDP-alcohol phosphatidyltransferase AUO97_09000 PF12833 Helix-turn-helix domain AUO97_09000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AUO97_09000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AUO97_09000 PF02805 Metal binding domain of Ada AUO97_09025 PF13533 Biotin-lipoyl like AUO97_09030 PF03652 Holliday junction resolvase AUO97_09035 PF02622 Uncharacterized ACR, COG1678 AUO97_09040 PF02463 RecF/RecN/SMC N terminal domain AUO97_09050 PF06865 Pyrimidine/purine nucleoside phosphorylase AUO97_09055 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUO97_09055 PF00588 SpoU rRNA Methylase family AUO97_09065 PF01121 Dephospho-CoA kinase AUO97_09070 PF06750 Bacterial Peptidase A24 N-terminal domain AUO97_09070 PF01478 Type IV leader peptidase family AUO97_09075 PF00482 Type II secretion system (T2SS), protein F AUO97_09080 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AUO97_09080 PF00437 Type II/IV secretion system protein AUO97_09085 PF00121 Triosephosphate isomerase AUO97_09090 PF03840 Preprotein translocase SecG subunit AUO97_09105 PF02576 RimP N-terminal domain AUO97_09105 PF17384 RimP C-terminal SH3 domain AUO97_09110 PF08529 NusA N-terminal domain AUO97_09110 PF13184 NusA-like KH domain AUO97_09110 PF00575 S1 RNA binding domain AUO97_09115 PF11987 Translation-initiation factor 2 AUO97_09115 PF04760 Translation initiation factor IF-2, N-terminal region AUO97_09115 PF08364 Bacterial translation initiation factor IF-2 associated region AUO97_09115 PF00009 Elongation factor Tu GTP binding domain AUO97_09120 PF02033 Ribosome-binding factor A AUO97_09130 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AUO97_09140 PF00361 Proton-conducting membrane transporter AUO97_09145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AUO97_09150 PF00361 Proton-conducting membrane transporter AUO97_09150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AUO97_09150 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AUO97_09150 PF13244 Domain of unknown function (DUF4040) AUO97_09165 PF01502 Phosphoribosyl-AMP cyclohydrolase AUO97_09170 PF01494 FAD binding domain AUO97_09175 PF03109 ABC1 family AUO97_09185 PF01209 ubiE/COQ5 methyltransferase family AUO97_09195 PF03976 Polyphosphate kinase 2 (PPK2) AUO97_09205 PF17946 RecC C-terminal domain AUO97_09210 PF12705 PD-(D/E)XK nuclease superfamily AUO97_09210 PF00580 UvrD/REP helicase N-terminal domain AUO97_09210 PF13361 UvrD-like helicase C-terminal domain AUO97_09215 PF13538 UvrD-like helicase C-terminal domain AUO97_09225 PF00312 Ribosomal protein S15 AUO97_09230 PF01138 3' exoribonuclease family, domain 1 AUO97_09230 PF00575 S1 RNA binding domain AUO97_09230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AUO97_09230 PF03725 3' exoribonuclease family, domain 2 AUO97_09230 PF00013 KH domain AUO97_09235 PF01544 CorA-like Mg2+ transporter protein AUO97_09245 PF01556 DnaJ C terminal domain AUO97_09245 PF00226 DnaJ domain AUO97_09255 PF01430 Hsp33 protein AUO97_09260 PF02254 TrkA-N domain AUO97_09260 PF00999 Sodium/hydrogen exchanger family AUO97_09265 PF18074 Primosomal protein N C-terminal domain AUO97_09265 PF00271 Helicase conserved C-terminal domain AUO97_09265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AUO97_09265 PF00270 DEAD/DEAH box helicase AUO97_09265 PF17764 3′ DNA-binding domain (3′BD) AUO97_09270 PF00482 Type II secretion system (T2SS), protein F AUO97_09275 PF07963 Prokaryotic N-terminal methylation motif AUO97_09275 PF08334 Type II secretion system (T2SS), protein G AUO97_09285 PF01588 Putative tRNA binding domain AUO97_09290 PF00795 Carbon-nitrogen hydrolase AUO97_09295 PF03471 Transporter associated domain AUO97_09295 PF00571 CBS domain AUO97_09300 PF01206 Sulfurtransferase TusA AUO97_09320 PF01177 Asp/Glu/Hydantoin racemase AUO97_09330 PF00762 Ferrochelatase AUO97_09335 PF00753 Metallo-beta-lactamase superfamily AUO97_09340 PF03884 DNA gyrase inhibitor YacG AUO97_09360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AUO97_09375 PF01197 Ribosomal protein L31 AUO97_09380 PF03109 ABC1 family AUO97_09385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AUO97_09385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_09390 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_09390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_09390 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AUO97_09395 PF01554 MatE AUO97_09405 PF04055 Radical SAM superfamily AUO97_09405 PF06969 HemN C-terminal domain AUO97_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_09415 PF03466 LysR substrate binding domain AUO97_09430 PF13193 AMP-binding enzyme C-terminal domain AUO97_09430 PF00501 AMP-binding enzyme AUO97_09435 PF00575 S1 RNA binding domain AUO97_09435 PF12111 Polyribonucleotide phosphorylase C terminal AUO97_09435 PF10150 Ribonuclease E/G family AUO97_09445 PF00849 RNA pseudouridylate synthase AUO97_09445 PF01479 S4 domain AUO97_09450 PF13419 Haloacid dehalogenase-like hydrolase AUO97_09455 PF13280 WYL domain AUO97_09455 PF08279 HTH domain AUO97_09460 PF02798 Glutathione S-transferase, N-terminal domain AUO97_09470 PF03466 LysR substrate binding domain AUO97_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_09475 PF12706 Beta-lactamase superfamily domain AUO97_09480 PF00141 Peroxidase AUO97_09485 PF00391 PEP-utilising enzyme, mobile domain AUO97_09485 PF05524 PEP-utilising enzyme, N-terminal AUO97_09485 PF02896 PEP-utilising enzyme, TIM barrel domain AUO97_09485 PF01590 GAF domain AUO97_09490 PF00293 NUDIX domain AUO97_09500 PF03466 LysR substrate binding domain AUO97_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_09510 PF00330 Aconitase family (aconitate hydratase) AUO97_09515 PF00694 Aconitase C-terminal domain AUO97_09525 PF00180 Isocitrate/isopropylmalate dehydrogenase AUO97_09540 PF01176 Translation initiation factor 1A / IF-1 AUO97_09550 PF01416 tRNA pseudouridine synthase AUO97_09570 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUO97_09570 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUO97_09580 PF00375 Sodium:dicarboxylate symporter family AUO97_09590 PF03279 Bacterial lipid A biosynthesis acyltransferase AUO97_09595 PF01810 LysE type translocator AUO97_09610 PF00107 Zinc-binding dehydrogenase AUO97_09610 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_09615 PF01638 HxlR-like helix-turn-helix AUO97_09625 PF01131 DNA topoisomerase AUO97_09625 PF08272 Topoisomerase I zinc-ribbon-like AUO97_09625 PF01396 Topoisomerase DNA binding C4 zinc finger AUO97_09625 PF01751 Toprim domain AUO97_09640 PF00580 UvrD/REP helicase N-terminal domain AUO97_09640 PF13361 UvrD-like helicase C-terminal domain AUO97_09645 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AUO97_09665 PF02254 TrkA-N domain AUO97_09665 PF00999 Sodium/hydrogen exchanger family AUO97_09670 PF00471 Ribosomal protein L33 AUO97_09675 PF00830 Ribosomal L28 family AUO97_09680 PF00171 Aldehyde dehydrogenase family AUO97_09690 PF00551 Formyl transferase AUO97_09690 PF01842 ACT domain AUO97_09700 PF01618 MotA/TolQ/ExbB proton channel family AUO97_09710 PF01625 Peptide methionine sulfoxide reductase AUO97_09720 PF00186 Dihydrofolate reductase AUO97_09725 PF00303 Thymidylate synthase AUO97_09740 PF01790 Prolipoprotein diacylglyceryl transferase AUO97_09760 PF00902 Sec-independent protein translocase protein (TatC) AUO97_09765 PF02416 mttA/Hcf106 family AUO97_09770 PF02416 mttA/Hcf106 family AUO97_09780 PF01725 Ham1 family AUO97_09790 PF07021 Methionine biosynthesis protein MetW AUO97_09790 PF00561 alpha/beta hydrolase fold AUO97_09795 PF00561 alpha/beta hydrolase fold AUO97_09800 PF08502 LeuA allosteric (dimerisation) domain AUO97_09800 PF00682 HMGL-like AUO97_09805 PF18331 PKHD-type hydroxylase C-terminal domain AUO97_09805 PF13640 2OG-Fe(II) oxygenase superfamily AUO97_09810 PF00593 TonB dependent receptor AUO97_09810 PF07715 TonB-dependent Receptor Plug Domain AUO97_09815 PF05698 Bacterial trigger factor protein (TF) C-terminus AUO97_09815 PF05697 Bacterial trigger factor protein (TF) AUO97_09815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_09820 PF00574 Clp protease AUO97_09825 PF10431 C-terminal, D2-small domain, of ClpB protein AUO97_09825 PF07724 AAA domain (Cdc48 subfamily) AUO97_09825 PF06689 ClpX C4-type zinc finger AUO97_09840 PF05683 Fumarase C-terminus AUO97_09840 PF05681 Fumarate hydratase (Fumerase) AUO97_09845 PF07085 DRTGG domain AUO97_09845 PF01515 Phosphate acetyl/butaryl transferase AUO97_09850 PF00871 Acetokinase family AUO97_09855 PF00920 Dehydratase family AUO97_09860 PF01081 KDPG and KHG aldolase AUO97_09865 PF02447 GntP family permease AUO97_09870 PF01202 Shikimate kinase AUO97_09875 PF00171 Aldehyde dehydrogenase family AUO97_09880 PF00171 Aldehyde dehydrogenase family AUO97_09885 PF00561 alpha/beta hydrolase fold AUO97_09895 PF00933 Glycosyl hydrolase family 3 N terminal domain AUO97_09900 PF17804 Tail specific protease N-terminal domain AUO97_09900 PF03572 Peptidase family S41 AUO97_09900 PF00595 PDZ domain AUO97_09900 PF11818 C-terminal domain of tail specific protease (DUF3340) AUO97_09905 PF00534 Glycosyl transferases group 1 AUO97_09905 PF13439 Glycosyltransferase Family 4 AUO97_09910 PF01569 PAP2 superfamily AUO97_09915 PF04384 Iron-sulphur cluster assembly AUO97_09920 PF00334 Nucleoside diphosphate kinase AUO97_09925 PF04055 Radical SAM superfamily AUO97_09935 PF13464 Domain of unknown function (DUF4115) AUO97_09940 PF04551 GcpE protein AUO97_09945 PF13393 Histidyl-tRNA synthetase AUO97_09945 PF03129 Anticodon binding domain AUO97_09955 PF13360 PQQ-like domain AUO97_09960 PF01926 50S ribosome-binding GTPase AUO97_09960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AUO97_09975 PF00550 Phosphopantetheine attachment site AUO97_09980 PF00550 Phosphopantetheine attachment site AUO97_09990 PF13193 AMP-binding enzyme C-terminal domain AUO97_09990 PF00501 AMP-binding enzyme AUO97_09995 PF00535 Glycosyl transferase family 2 AUO97_10005 PF00221 Aromatic amino acid lyase AUO97_10025 PF04820 Tryptophan halogenase AUO97_10035 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_10035 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_10050 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_10050 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_10065 PF02556 Preprotein translocase subunit SecB AUO97_10070 PF00462 Glutaredoxin AUO97_10080 PF03193 RsgA GTPase AUO97_10085 PF00929 Exonuclease AUO97_10100 PF02321 Outer membrane efflux protein AUO97_10105 PF02687 FtsX-like permease family AUO97_10105 PF12704 MacB-like periplasmic core domain AUO97_10105 PF00005 ABC transporter AUO97_10110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_10125 PF09334 tRNA synthetases class I (M) AUO97_10125 PF13603 Leucyl-tRNA synthetase, Domain 2 AUO97_10125 PF00133 tRNA synthetases class I (I, L, M and V) AUO97_10125 PF08264 Anticodon-binding domain of tRNA AUO97_10140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUO97_10140 PF00205 Thiamine pyrophosphate enzyme, central domain AUO97_10140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUO97_10145 PF10369 Small subunit of acetolactate synthase AUO97_10150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AUO97_10150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AUO97_10155 PF03707 Bacterial signalling protein N terminal repeat AUO97_10155 PF00990 Diguanylate cyclase, GGDEF domain AUO97_10155 PF00563 EAL domain AUO97_10180 PF16671 Actin cross-linking domain AUO97_10180 PF04717 Type VI secretion system, phage-baseplate injector AUO97_10200 PF16658 Class II release factor RF3, C-terminal domain AUO97_10200 PF03144 Elongation factor Tu domain 2 AUO97_10200 PF00009 Elongation factor Tu GTP binding domain AUO97_10215 PF01026 TatD related DNase AUO97_10220 PF00694 Aconitase C-terminal domain AUO97_10220 PF00330 Aconitase family (aconitate hydratase) AUO97_10225 PF00899 ThiF family AUO97_10230 PF03466 LysR substrate binding domain AUO97_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_10240 PF01207 Dihydrouridine synthase (Dus) AUO97_10245 PF07690 Major Facilitator Superfamily AUO97_10255 PF00892 EamA-like transporter family AUO97_10260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AUO97_10260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AUO97_10265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AUO97_10270 PF02233 NAD(P) transhydrogenase beta subunit AUO97_10275 PF00106 short chain dehydrogenase AUO97_10285 PF01261 Xylose isomerase-like TIM barrel AUO97_10290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUO97_10290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AUO97_10295 PF00378 Enoyl-CoA hydratase/isomerase AUO97_10300 PF01627 Hpt domain AUO97_10300 PF00672 HAMP domain AUO97_10300 PF00072 Response regulator receiver domain AUO97_10300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AUO97_10300 PF00512 His Kinase A (phospho-acceptor) domain AUO97_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_10305 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_10315 PF05958 tRNA (Uracil-5-)-methyltransferase AUO97_10320 PF04607 Region found in RelA / SpoT proteins AUO97_10320 PF13291 ACT domain AUO97_10320 PF02824 TGS domain AUO97_10330 PF03819 MazG nucleotide pyrophosphohydrolase domain AUO97_10340 PF12627 Probable RNA and SrmB- binding site of polymerase A AUO97_10340 PF01743 Poly A polymerase head domain AUO97_10340 PF12626 Polymerase A arginine-rich C-terminus AUO97_10345 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AUO97_10350 PF02548 Ketopantoate hydroxymethyltransferase AUO97_10355 PF02569 Pantoate-beta-alanine ligase AUO97_10360 PF03668 P-loop ATPase protein family AUO97_10365 PF00381 PTS HPr component phosphorylation site AUO97_10370 PF04751 Protein of unknown function (DUF615) AUO97_10375 PF00501 AMP-binding enzyme AUO97_10375 PF13193 AMP-binding enzyme C-terminal domain AUO97_10380 PF03129 Anticodon binding domain AUO97_10380 PF02824 TGS domain AUO97_10380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUO97_10380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUO97_10385 PF00707 Translation initiation factor IF-3, C-terminal domain AUO97_10385 PF05198 Translation initiation factor IF-3, N-terminal domain AUO97_10395 PF02798 Glutathione S-transferase, N-terminal domain AUO97_10395 PF00043 Glutathione S-transferase, C-terminal domain AUO97_10400 PF09335 SNARE associated Golgi protein AUO97_10405 PF07690 Major Facilitator Superfamily AUO97_10415 PF01632 Ribosomal protein L35 AUO97_10420 PF00453 Ribosomal protein L20 AUO97_10445 PF01409 tRNA synthetases class II core domain (F) AUO97_10445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AUO97_10450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AUO97_10450 PF03483 B3/4 domain AUO97_10450 PF03484 tRNA synthetase B5 domain AUO97_10450 PF03147 Ferredoxin-fold anticodon binding domain AUO97_10450 PF01588 Putative tRNA binding domain AUO97_10455 PF00216 Bacterial DNA-binding protein AUO97_10465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUO97_10465 PF07498 Rho termination factor, N-terminal domain AUO97_10465 PF07497 Rho termination factor, RNA-binding domain AUO97_10470 PF00085 Thioredoxin AUO97_10475 PF02541 Ppx/GppA phosphatase family AUO97_10480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AUO97_10485 PF11734 TilS substrate C-terminal domain AUO97_10485 PF09179 TilS substrate binding domain AUO97_10485 PF01171 PP-loop family AUO97_10490 PF14748 Pyrroline-5-carboxylate reductase dimerisation AUO97_10490 PF03807 NADP oxidoreductase coenzyme F420-dependent AUO97_10495 PF02325 YGGT family AUO97_10500 PF00476 DNA polymerase family A AUO97_10500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AUO97_10500 PF01367 5'-3' exonuclease, C-terminal SAM fold AUO97_10500 PF01612 3'-5' exonuclease AUO97_10520 PF00437 Type II/IV secretion system protein AUO97_10525 PF02566 OsmC-like protein AUO97_10530 PF01047 MarR family AUO97_10540 PF00795 Carbon-nitrogen hydrolase AUO97_10585 PF04552 Sigma-54, DNA binding domain AUO97_10585 PF04963 Sigma-54 factor, core binding domain AUO97_10585 PF00309 Sigma-54 factor, Activator interacting domain (AID) AUO97_10590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AUO97_10595 PF01722 BolA-like protein AUO97_10600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUO97_10605 PF01634 ATP phosphoribosyltransferase AUO97_10610 PF00815 Histidinol dehydrogenase AUO97_10615 PF00155 Aminotransferase class I and II AUO97_10620 PF04715 Anthranilate synthase component I, N terminal region AUO97_10620 PF00425 chorismate binding enzyme AUO97_10660 PF00293 NUDIX domain AUO97_10665 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_10670 PF00814 Glycoprotease family AUO97_10675 PF04445 Putative SAM-dependent methyltransferase AUO97_10685 PF00756 Putative esterase AUO97_10695 PF00834 Ribulose-phosphate 3 epimerase family AUO97_10710 PF07731 Multicopper oxidase AUO97_10710 PF07732 Multicopper oxidase AUO97_10710 PF00394 Multicopper oxidase AUO97_10725 PF00893 Small Multidrug Resistance protein AUO97_10730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AUO97_10730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AUO97_10735 PF01960 ArgJ family AUO97_10740 PF02445 Quinolinate synthetase A protein AUO97_10765 PF00962 Adenosine/AMP deaminase AUO97_10770 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_10770 PF00107 Zinc-binding dehydrogenase AUO97_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_10775 PF03466 LysR substrate binding domain AUO97_10780 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_10780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_10780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_10785 PF07690 Major Facilitator Superfamily AUO97_10790 PF02515 CoA-transferase family III AUO97_10800 PF00890 FAD binding domain AUO97_10800 PF14537 Cytochrome c3 AUO97_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_10805 PF03466 LysR substrate binding domain AUO97_10815 PF07690 Major Facilitator Superfamily AUO97_10825 PF03466 LysR substrate binding domain AUO97_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_10835 PF01546 Peptidase family M20/M25/M40 AUO97_10835 PF07687 Peptidase dimerisation domain AUO97_10840 PF12833 Helix-turn-helix domain AUO97_10840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AUO97_10850 PF01810 LysE type translocator AUO97_10855 PF03466 LysR substrate binding domain AUO97_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_10865 PF08267 Cobalamin-independent synthase, N-terminal domain AUO97_10865 PF01717 Cobalamin-independent synthase, Catalytic domain AUO97_10870 PF01613 Flavin reductase like domain AUO97_10890 PF17074 Darcynin, domain of unknown function AUO97_10900 PF06594 Haemolysin-type calcium binding protein related domain AUO97_10900 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AUO97_10905 PF17074 Darcynin, domain of unknown function AUO97_10920 PF00268 Ribonucleotide reductase, small chain AUO97_10930 PF03477 ATP cone domain AUO97_10930 PF00317 Ribonucleotide reductase, all-alpha domain AUO97_10930 PF02867 Ribonucleotide reductase, barrel domain AUO97_10935 PF00486 Transcriptional regulatory protein, C terminal AUO97_10935 PF00072 Response regulator receiver domain AUO97_10940 PF00672 HAMP domain AUO97_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_10940 PF00512 His Kinase A (phospho-acceptor) domain AUO97_10950 PF00990 Diguanylate cyclase, GGDEF domain AUO97_10950 PF17151 Periplasmic sensor domain AUO97_10955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AUO97_10960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AUO97_10965 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AUO97_10965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AUO97_10975 PF10531 SLBB domain AUO97_10975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AUO97_10975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AUO97_10980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AUO97_10980 PF00384 Molybdopterin oxidoreductase AUO97_10980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AUO97_10985 PF00146 NADH dehydrogenase AUO97_10990 PF12838 4Fe-4S dicluster domain AUO97_10995 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AUO97_11000 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AUO97_11005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AUO97_11005 PF00361 Proton-conducting membrane transporter AUO97_11010 PF00361 Proton-conducting membrane transporter AUO97_11015 PF00361 Proton-conducting membrane transporter AUO97_11025 PF00313 'Cold-shock' DNA-binding domain AUO97_11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_11035 PF03466 LysR substrate binding domain AUO97_11040 PF00175 Oxidoreductase NAD-binding domain AUO97_11040 PF00970 Oxidoreductase FAD-binding domain AUO97_11055 PF05552 Conserved TM helix AUO97_11065 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_11070 PF13533 Biotin-lipoyl like AUO97_11095 PF09334 tRNA synthetases class I (M) AUO97_11095 PF01588 Putative tRNA binding domain AUO97_11105 PF10609 NUBPL iron-transfer P-loop NTPase AUO97_11115 PF01048 Phosphorylase superfamily AUO97_11130 PF00692 dUTPase AUO97_11160 PF01207 Dihydrouridine synthase (Dus) AUO97_11170 PF02978 Signal peptide binding domain AUO97_11170 PF00448 SRP54-type protein, GTPase domain AUO97_11170 PF02881 SRP54-type protein, helical bundle domain AUO97_11175 PF03309 Type III pantothenate kinase AUO97_11185 PF01925 Sulfite exporter TauE/SafE AUO97_11195 PF06470 SMC proteins Flexible Hinge Domain AUO97_11195 PF02463 RecF/RecN/SMC N terminal domain AUO97_11205 PF01653 NAD-dependent DNA ligase adenylation domain AUO97_11205 PF00533 BRCA1 C Terminus (BRCT) domain AUO97_11205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AUO97_11205 PF03120 NAD-dependent DNA ligase OB-fold domain AUO97_11205 PF12826 Helix-hairpin-helix motif AUO97_11210 PF00210 Ferritin-like domain AUO97_11215 PF07690 Major Facilitator Superfamily AUO97_11220 PF00982 Glycosyltransferase family 20 AUO97_11225 PF02358 Trehalose-phosphatase AUO97_11230 PF12697 Alpha/beta hydrolase family AUO97_11230 PF08241 Methyltransferase domain AUO97_11235 PF04055 Radical SAM superfamily AUO97_11235 PF06968 Biotin and Thiamin Synthesis associated domain AUO97_11235 PF00202 Aminotransferase class-III AUO97_11240 PF00155 Aminotransferase class I and II AUO97_11255 PF00849 RNA pseudouridylate synthase AUO97_11255 PF01479 S4 domain AUO97_11260 PF04079 Segregation and condensation complex subunit ScpB AUO97_11265 PF02616 Segregation and condensation protein ScpA AUO97_11270 PF01300 Telomere recombination AUO97_11275 PF04315 Elongation factor P hydroxylase AUO97_11280 PF02620 Large ribosomal RNA subunit accumulation protein YceD AUO97_11285 PF01783 Ribosomal L32p protein family AUO97_11290 PF00698 Acyl transferase domain AUO97_11300 PF00550 Phosphopantetheine attachment site AUO97_11305 PF04972 BON domain AUO97_11305 PF01476 LysM domain AUO97_11310 PF03070 TENA/THI-4/PQQC family AUO97_11310 PF02581 Thiamine monophosphate synthase AUO97_11310 PF08543 Phosphomethylpyrimidine kinase AUO97_11320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AUO97_11335 PF02261 Aspartate decarboxylase AUO97_11340 PF01195 Peptidyl-tRNA hydrolase AUO97_11345 PF01386 Ribosomal L25p family AUO97_11350 PF14572 Phosphoribosyl synthetase-associated domain AUO97_11350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AUO97_11375 PF08544 GHMP kinases C terminal AUO97_11375 PF00288 GHMP kinases N terminal domain AUO97_11380 PF03550 Outer membrane lipoprotein LolB AUO97_11390 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AUO97_11390 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AUO97_11390 PF01488 Shikimate / quinate 5-dehydrogenase AUO97_11395 PF08278 DNA primase DnaG DnaB-binding AUO97_11395 PF08275 DNA primase catalytic core, N-terminal domain AUO97_11395 PF10410 DnaB-helicase binding domain of primase AUO97_11395 PF01807 CHC2 zinc finger AUO97_11400 PF13525 Outer membrane lipoprotein AUO97_11405 PF00849 RNA pseudouridylate synthase AUO97_11405 PF01479 S4 domain AUO97_11415 PF03358 NADPH-dependent FMN reductase AUO97_11420 PF01668 SmpB protein AUO97_11425 PF01467 Cytidylyltransferase-like AUO97_11430 PF00037 4Fe-4S binding domain AUO97_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_11450 PF03466 LysR substrate binding domain AUO97_11455 PF00180 Isocitrate/isopropylmalate dehydrogenase AUO97_11460 PF02028 BCCT, betaine/carnitine/choline family transporter AUO97_11465 PF07859 alpha/beta hydrolase fold AUO97_11470 PF00355 Rieske [2Fe-2S] domain AUO97_11470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AUO97_11475 PF00171 Aldehyde dehydrogenase family AUO97_11480 PF00970 Oxidoreductase FAD-binding domain AUO97_11480 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_11480 PF00175 Oxidoreductase NAD-binding domain AUO97_11495 PF02540 NAD synthase AUO97_11495 PF00795 Carbon-nitrogen hydrolase AUO97_11505 PF05726 Pirin C-terminal cupin domain AUO97_11505 PF02678 Pirin AUO97_11515 PF02801 Beta-ketoacyl synthase, C-terminal domain AUO97_11515 PF00109 Beta-ketoacyl synthase, N-terminal domain AUO97_11525 PF00164 Ribosomal protein S12/S23 AUO97_11530 PF00177 Ribosomal protein S7p/S5e AUO97_11535 PF14492 Elongation Factor G, domain II AUO97_11535 PF03764 Elongation factor G, domain IV AUO97_11535 PF00009 Elongation factor Tu GTP binding domain AUO97_11535 PF00679 Elongation factor G C-terminus AUO97_11535 PF03144 Elongation factor Tu domain 2 AUO97_11540 PF03144 Elongation factor Tu domain 2 AUO97_11540 PF00009 Elongation factor Tu GTP binding domain AUO97_11540 PF03143 Elongation factor Tu C-terminal domain AUO97_11555 PF00583 Acetyltransferase (GNAT) family AUO97_11560 PF04377 Arginine-tRNA-protein transferase, C terminus AUO97_11560 PF04376 Arginine-tRNA-protein transferase, N terminus AUO97_11565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AUO97_11570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_11575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AUO97_11575 PF01580 FtsK/SpoIIIE family AUO97_11575 PF17854 FtsK alpha domain AUO97_11575 PF09397 Ftsk gamma domain AUO97_11580 PF01810 LysE type translocator AUO97_11590 PF03776 Septum formation topological specificity factor MinE AUO97_11595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AUO97_11600 PF03775 Septum formation inhibitor MinC, C-terminal domain AUO97_11610 PF01553 Acyltransferase AUO97_11615 PF00691 OmpA family AUO97_11615 PF13488 Glycine zipper AUO97_11620 PF00580 UvrD/REP helicase N-terminal domain AUO97_11620 PF13361 UvrD-like helicase C-terminal domain AUO97_11625 PF00692 dUTPase AUO97_11630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUO97_11630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUO97_11630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUO97_11630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUO97_11635 PF00696 Amino acid kinase family AUO97_11645 PF13230 Glutamine amidotransferases class-II AUO97_11650 PF01814 Hemerythrin HHE cation binding domain AUO97_11665 PF03658 RnfH family Ubiquitin AUO97_11670 PF04355 SmpA / OmlA family AUO97_11675 PF01475 Ferric uptake regulator family AUO97_11680 PF00437 Type II/IV secretion system protein AUO97_11685 PF00437 Type II/IV secretion system protein AUO97_11690 PF01168 Alanine racemase, N-terminal domain AUO97_11700 PF12320 Type 5 capsule protein repressor C-terminal domain AUO97_11700 PF00149 Calcineurin-like phosphoesterase AUO97_11720 PF08338 Domain of unknown function (DUF1731) AUO97_11720 PF01370 NAD dependent epimerase/dehydratase family AUO97_11725 PF01266 FAD dependent oxidoreductase AUO97_11730 PF00490 Delta-aminolevulinic acid dehydratase AUO97_11735 PF03061 Thioesterase superfamily AUO97_11740 PF13533 Biotin-lipoyl like AUO97_11745 PF07690 Major Facilitator Superfamily AUO97_11795 PF00083 Sugar (and other) transporter AUO97_11800 PF00701 Dihydrodipicolinate synthetase family AUO97_11825 PF13520 Amino acid permease AUO97_11830 PF02574 Homocysteine S-methyltransferase AUO97_11840 PF06039 Malate:quinone oxidoreductase (Mqo) AUO97_11845 PF05199 GMC oxidoreductase AUO97_11845 PF00732 GMC oxidoreductase AUO97_11850 PF00171 Aldehyde dehydrogenase family AUO97_11855 PF00440 Bacterial regulatory proteins, tetR family AUO97_11855 PF13977 BetI-type transcriptional repressor, C-terminal AUO97_11860 PF02028 BCCT, betaine/carnitine/choline family transporter AUO97_11865 PF02028 BCCT, betaine/carnitine/choline family transporter AUO97_11875 PF03061 Thioesterase superfamily AUO97_11885 PF02492 CobW/HypB/UreG, nucleotide-binding domain AUO97_11885 PF07683 Cobalamin synthesis protein cobW C-terminal domain AUO97_11890 PF00375 Sodium:dicarboxylate symporter family AUO97_11895 PF07152 YaeQ protein AUO97_11900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUO97_11905 PF14883 Hypothetical glycosyl hydrolase family 13 AUO97_11905 PF01522 Polysaccharide deacetylase AUO97_11910 PF00535 Glycosyl transferase family 2 AUO97_11920 PF00378 Enoyl-CoA hydratase/isomerase AUO97_11935 PF09339 IclR helix-turn-helix domain AUO97_11935 PF01614 Bacterial transcriptional regulator AUO97_11940 PF00355 Rieske [2Fe-2S] domain AUO97_11950 PF00355 Rieske [2Fe-2S] domain AUO97_11960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUO97_11965 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_11965 PF14759 Reductase C-terminal AUO97_11970 PF07690 Major Facilitator Superfamily AUO97_11980 PF12697 Alpha/beta hydrolase family AUO97_11990 PF03447 Homoserine dehydrogenase, NAD binding domain AUO97_11990 PF01958 Domain of unknown function DUF108 AUO97_11995 PF00171 Aldehyde dehydrogenase family AUO97_12000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUO97_12000 PF00205 Thiamine pyrophosphate enzyme, central domain AUO97_12000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUO97_12010 PF07690 Major Facilitator Superfamily AUO97_12015 PF01327 Polypeptide deformylase AUO97_12020 PF04960 Glutaminase AUO97_12025 PF02311 AraC-like ligand binding domain AUO97_12025 PF12833 Helix-turn-helix domain AUO97_12030 PF07690 Major Facilitator Superfamily AUO97_12040 PF01263 Aldose 1-epimerase AUO97_12055 PF03466 LysR substrate binding domain AUO97_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_12065 PF07690 Major Facilitator Superfamily AUO97_12070 PF00456 Transketolase, thiamine diphosphate binding domain AUO97_12075 PF02779 Transketolase, pyrimidine binding domain AUO97_12075 PF02780 Transketolase, C-terminal domain AUO97_12080 PF02574 Homocysteine S-methyltransferase AUO97_12080 PF00809 Pterin binding enzyme AUO97_12080 PF02965 Vitamin B12 dependent methionine synthase, activation domain AUO97_12080 PF02607 B12 binding domain AUO97_12080 PF02310 B12 binding domain AUO97_12085 PF01384 Phosphate transporter family AUO97_12090 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_12100 PF03781 Sulfatase-modifying factor enzyme 1 AUO97_12105 PF00884 Sulfatase AUO97_12115 PF01521 Iron-sulphur cluster biosynthesis AUO97_12115 PF01106 NifU-like domain AUO97_12120 PF07715 TonB-dependent Receptor Plug Domain AUO97_12120 PF00593 TonB dependent receptor AUO97_12130 PF00561 alpha/beta hydrolase fold AUO97_12135 PF00484 Carbonic anhydrase AUO97_12140 PF13472 GDSL-like Lipase/Acylhydrolase family AUO97_12145 PF00005 ABC transporter AUO97_12155 PF01694 Rhomboid family AUO97_12160 PF00912 Transglycosylase AUO97_12165 PF02503 Polyphosphate kinase middle domain AUO97_12165 PF13090 Polyphosphate kinase C-terminal domain 2 AUO97_12165 PF17941 Polyphosphate kinase C-terminal domain 1 AUO97_12165 PF13089 Polyphosphate kinase N-terminal domain AUO97_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_12175 PF03466 LysR substrate binding domain AUO97_12180 PF00561 alpha/beta hydrolase fold AUO97_12185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_12185 PF18113 Rubredoxin binding C-terminal domain AUO97_12190 PF00301 Rubredoxin AUO97_12205 PF01336 OB-fold nucleic acid binding domain AUO97_12205 PF00152 tRNA synthetases class II (D, K and N) AUO97_12210 PF14052 Capsule assembly protein Wzi AUO97_12215 PF01507 Phosphoadenosine phosphosulfate reductase family AUO97_12220 PF00009 Elongation factor Tu GTP binding domain AUO97_12235 PF03600 Citrate transporter AUO97_12245 PF03471 Transporter associated domain AUO97_12245 PF00571 CBS domain AUO97_12245 PF01595 Cyclin M transmembrane N-terminal domain AUO97_12250 PF03466 LysR substrate binding domain AUO97_12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_12255 PF00463 Isocitrate lyase family AUO97_12270 PF01774 UreD urease accessory protein AUO97_12275 PF00547 Urease, gamma subunit AUO97_12280 PF00699 Urease beta subunit AUO97_12290 PF01979 Amidohydrolase family AUO97_12290 PF00449 Urease alpha-subunit, N-terminal domain AUO97_12295 PF02814 UreE urease accessory protein, N-terminal domain AUO97_12295 PF05194 UreE urease accessory protein, C-terminal domain AUO97_12300 PF01730 UreF AUO97_12305 PF02492 CobW/HypB/UreG, nucleotide-binding domain AUO97_12320 PF00905 Penicillin binding protein transpeptidase domain AUO97_12320 PF03717 Penicillin-binding Protein dimerisation domain AUO97_12335 PF05191 Adenylate kinase, active site lid AUO97_12340 PF00633 Helix-hairpin-helix motif AUO97_12340 PF00730 HhH-GPD superfamily base excision DNA repair protein AUO97_12340 PF10576 Iron-sulfur binding domain of endonuclease III AUO97_12345 PF04060 Putative Fe-S cluster AUO97_12350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AUO97_12350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AUO97_12360 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AUO97_12365 PF02590 Predicted SPOUT methyltransferase AUO97_12370 PF05362 Lon protease (S16) C-terminal proteolytic domain AUO97_12370 PF02190 ATP-dependent protease La (LON) substrate-binding domain AUO97_12370 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_12375 PF13018 Extended Signal Peptide of Type V secretion system AUO97_12375 PF05658 Head domain of trimeric autotransporter adhesin AUO97_12375 PF05662 Coiled stalk of trimeric autotransporter adhesin AUO97_12375 PF03895 YadA-like membrane anchor domain AUO97_12380 PF00691 OmpA family AUO97_12380 PF01389 OmpA-like transmembrane domain AUO97_12385 PF01812 5-formyltetrahydrofolate cyclo-ligase family AUO97_12420 PF05195 Aminopeptidase P, N-terminal domain AUO97_12420 PF00557 Metallopeptidase family M24 AUO97_12425 PF01494 FAD binding domain AUO97_12430 PF01494 FAD binding domain AUO97_12440 PF13411 MerR HTH family regulatory protein AUO97_12450 PF01810 LysE type translocator AUO97_12455 PF03466 LysR substrate binding domain AUO97_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_12465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AUO97_12470 PF02021 Uncharacterised protein family UPF0102 AUO97_12475 PF04972 BON domain AUO97_12485 PF09297 NADH pyrophosphatase zinc ribbon domain AUO97_12485 PF00293 NUDIX domain AUO97_12495 PF00929 Exonuclease AUO97_12500 PF01464 Transglycosylase SLT domain AUO97_12500 PF01476 LysM domain AUO97_12500 PF01476 LysM domain AUO97_12500 PF01464 Transglycosylase SLT domain AUO97_12505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUO97_12510 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_12515 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_12515 PF12911 N-terminal TM domain of oligopeptide transport permease C AUO97_12520 PF00005 ABC transporter AUO97_12520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUO97_12525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_12525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_12530 PF00593 TonB dependent receptor AUO97_12530 PF07715 TonB-dependent Receptor Plug Domain AUO97_12540 PF00929 Exonuclease AUO97_12545 PF01979 Amidohydrolase family AUO97_12550 PF00563 EAL domain AUO97_12550 PF01590 GAF domain AUO97_12550 PF00360 Phytochrome region AUO97_12550 PF00990 Diguanylate cyclase, GGDEF domain AUO97_12555 PF00764 Arginosuccinate synthase AUO97_12565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_12615 PF01042 Endoribonuclease L-PSP AUO97_12620 PF01266 FAD dependent oxidoreductase AUO97_12625 PF03466 LysR substrate binding domain AUO97_12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_12640 PF01494 FAD binding domain AUO97_12645 PF03180 NLPA lipoprotein AUO97_12675 PF00324 Amino acid permease AUO97_12680 PF01266 FAD dependent oxidoreductase AUO97_12685 PF00324 Amino acid permease AUO97_12695 PF07729 FCD domain AUO97_12695 PF00392 Bacterial regulatory proteins, gntR family AUO97_12705 PF00171 Aldehyde dehydrogenase family AUO97_12715 PF00202 Aminotransferase class-III AUO97_12720 PF04958 Arginine N-succinyltransferase beta subunit AUO97_12725 PF00324 Amino acid permease AUO97_12745 PF00171 Aldehyde dehydrogenase family AUO97_12750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AUO97_12750 PF12833 Helix-turn-helix domain AUO97_12755 PF00892 EamA-like transporter family AUO97_12760 PF08666 SAF domain AUO97_12760 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AUO97_12765 PF07690 Major Facilitator Superfamily AUO97_12770 PF13378 Enolase C-terminal domain-like AUO97_12775 PF00701 Dihydrodipicolinate synthetase family AUO97_12780 PF00171 Aldehyde dehydrogenase family AUO97_12785 PF00392 Bacterial regulatory proteins, gntR family AUO97_12785 PF07729 FCD domain AUO97_12790 PF07519 Tannase and feruloyl esterase AUO97_12805 PF03573 outer membrane porin, OprD family AUO97_12810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_12810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_12810 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_12820 PF00171 Aldehyde dehydrogenase family AUO97_12825 PF00378 Enoyl-CoA hydratase/isomerase AUO97_12830 PF07690 Major Facilitator Superfamily AUO97_12845 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_12845 PF00175 Oxidoreductase NAD-binding domain AUO97_12850 PF00355 Rieske [2Fe-2S] domain AUO97_12855 PF07690 Major Facilitator Superfamily AUO97_12860 PF03573 outer membrane porin, OprD family AUO97_12865 PF05199 GMC oxidoreductase AUO97_12870 PF07859 alpha/beta hydrolase fold AUO97_12875 PF00106 short chain dehydrogenase AUO97_12880 PF00743 Flavin-binding monooxygenase-like AUO97_12885 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AUO97_12885 PF12833 Helix-turn-helix domain AUO97_12890 PF04072 Leucine carboxyl methyltransferase AUO97_12895 PF00743 Flavin-binding monooxygenase-like AUO97_12900 PF00106 short chain dehydrogenase AUO97_12910 PF17932 Tetracyclin repressor-like, C-terminal domain AUO97_12910 PF00440 Bacterial regulatory proteins, tetR family AUO97_12915 PF02678 Pirin AUO97_12915 PF17954 Quercetinase C-terminal cupin domain AUO97_12925 PF00106 short chain dehydrogenase AUO97_12930 PF00743 Flavin-binding monooxygenase-like AUO97_12940 PF00860 Permease family AUO97_12945 PF00962 Adenosine/AMP deaminase AUO97_12950 PF01292 Prokaryotic cytochrome b561 AUO97_12960 PF01351 Ribonuclease HII AUO97_12965 PF02599 Global regulator protein family AUO97_12970 PF01842 ACT domain AUO97_12970 PF00696 Amino acid kinase family AUO97_12970 PF13840 ACT domain AUO97_13020 PF01726 LexA DNA binding domain AUO97_13020 PF00717 Peptidase S24-like AUO97_13025 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AUO97_13040 PF00145 C-5 cytosine-specific DNA methylase AUO97_13110 PF06381 Protein of unknown function (DUF1073) AUO97_13135 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) AUO97_13240 PF13737 Transposase DDE domain AUO97_13250 PF00817 impB/mucB/samB family AUO97_13250 PF13438 Domain of unknown function (DUF4113) AUO97_13250 PF11799 impB/mucB/samB family C-terminal domain AUO97_13255 PF00717 Peptidase S24-like AUO97_13270 PF00589 Phage integrase family AUO97_13270 PF13356 Arm DNA-binding domain AUO97_13275 PF02272 DHHA1 domain AUO97_13275 PF01411 tRNA synthetases class II (A) AUO97_13275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUO97_13280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AUO97_13280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AUO97_13285 PF13393 Histidyl-tRNA synthetase AUO97_13290 PF00709 Adenylosuccinate synthetase AUO97_13305 PF00248 Aldo/keto reductase family AUO97_13310 PF13545 Crp-like helix-turn-helix domain AUO97_13310 PF00027 Cyclic nucleotide-binding domain AUO97_13315 PF02566 OsmC-like protein AUO97_13330 PF07724 AAA domain (Cdc48 subfamily) AUO97_13330 PF17871 AAA lid domain AUO97_13330 PF10431 C-terminal, D2-small domain, of ClpB protein AUO97_13330 PF02861 Clp amino terminal domain, pathogenicity island component AUO97_13330 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_13345 PF10672 S-adenosylmethionine-dependent methyltransferase AUO97_13345 PF02926 THUMP domain AUO97_13345 PF01170 Putative RNA methylase family UPF0020 AUO97_13355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUO97_13355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUO97_13360 PF01979 Amidohydrolase family AUO97_13365 PF00691 OmpA family AUO97_13365 PF13488 Glycine zipper AUO97_13375 PF00043 Glutathione S-transferase, C-terminal domain AUO97_13375 PF13417 Glutathione S-transferase, N-terminal domain AUO97_13380 PF02390 Putative methyltransferase AUO97_13390 PF00043 Glutathione S-transferase, C-terminal domain AUO97_13390 PF02798 Glutathione S-transferase, N-terminal domain AUO97_13400 PF13192 Thioredoxin domain AUO97_13400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_13420 PF00578 AhpC/TSA family AUO97_13420 PF10417 C-terminal domain of 1-Cys peroxiredoxin AUO97_13425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AUO97_13425 PF04408 Helicase associated domain (HA2) AUO97_13425 PF00271 Helicase conserved C-terminal domain AUO97_13425 PF00270 DEAD/DEAH box helicase AUO97_13425 PF11898 Domain of unknown function (DUF3418) AUO97_13430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUO97_13430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUO97_13440 PF07690 Major Facilitator Superfamily AUO97_13445 PF03594 Benzoate membrane transport protein AUO97_13450 PF00106 short chain dehydrogenase AUO97_13455 PF00970 Oxidoreductase FAD-binding domain AUO97_13455 PF00175 Oxidoreductase NAD-binding domain AUO97_13455 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_13460 PF00866 Ring hydroxylating beta subunit AUO97_13465 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AUO97_13465 PF00355 Rieske [2Fe-2S] domain AUO97_13470 PF03466 LysR substrate binding domain AUO97_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_13475 PF00403 Heavy-metal-associated domain AUO97_13480 PF00403 Heavy-metal-associated domain AUO97_13485 PF09278 MerR, DNA binding AUO97_13485 PF00376 MerR family regulatory protein AUO97_13525 PF02601 Exonuclease VII, large subunit AUO97_13525 PF13742 OB-fold nucleic acid binding domain AUO97_13560 PF01810 LysE type translocator AUO97_13565 PF00313 'Cold-shock' DNA-binding domain AUO97_13575 PF03807 NADP oxidoreductase coenzyme F420-dependent AUO97_13575 PF14748 Pyrroline-5-carboxylate reductase dimerisation AUO97_13600 PF07690 Major Facilitator Superfamily AUO97_13605 PF01638 HxlR-like helix-turn-helix AUO97_13635 PF09190 DALR domain AUO97_13635 PF01406 tRNA synthetases class I (C) catalytic domain AUO97_13640 PF01380 SIS domain AUO97_13640 PF00571 CBS domain AUO97_13655 PF03968 OstA-like protein AUO97_13660 PF00005 ABC transporter AUO97_13660 PF12399 Branched-chain amino acid ATP-binding cassette transporter AUO97_13665 PF02321 Outer membrane efflux protein AUO97_13670 PF00664 ABC transporter transmembrane region AUO97_13670 PF00005 ABC transporter AUO97_13670 PF03412 Peptidase C39 family AUO97_13680 PF01205 Uncharacterized protein family UPF0029 AUO97_13685 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_13695 PF01596 O-methyltransferase AUO97_13705 PF00037 4Fe-4S binding domain AUO97_13705 PF11953 Domain of unknown function (DUF3470) AUO97_13715 PF01624 MutS domain I AUO97_13715 PF05188 MutS domain II AUO97_13715 PF00488 MutS domain V AUO97_13715 PF05192 MutS domain III AUO97_13715 PF05190 MutS family domain IV AUO97_13720 PF01037 Lrp/AsnC ligand binding domain AUO97_13725 PF00892 EamA-like transporter family AUO97_13730 PF00563 EAL domain AUO97_13730 PF03707 Bacterial signalling protein N terminal repeat AUO97_13730 PF00990 Diguanylate cyclase, GGDEF domain AUO97_13735 PF03279 Bacterial lipid A biosynthesis acyltransferase AUO97_13740 PF01544 CorA-like Mg2+ transporter protein AUO97_13760 PF07690 Major Facilitator Superfamily AUO97_13780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUO97_13780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUO97_13800 PF13419 Haloacid dehalogenase-like hydrolase AUO97_13815 PF03466 LysR substrate binding domain AUO97_13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_13825 PF01566 Natural resistance-associated macrophage protein AUO97_13830 PF03746 LamB/YcsF family AUO97_13835 PF07286 Protein of unknown function (DUF1445) AUO97_13845 PF02785 Biotin carboxylase C-terminal domain AUO97_13845 PF00289 Biotin carboxylase, N-terminal domain AUO97_13845 PF00364 Biotin-requiring enzyme AUO97_13845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_13850 PF00654 Voltage gated chloride channel AUO97_13855 PF01556 DnaJ C terminal domain AUO97_13855 PF00684 DnaJ central domain AUO97_13855 PF00226 DnaJ domain AUO97_13870 PF00440 Bacterial regulatory proteins, tetR family AUO97_13880 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_13880 PF13823 Alcohol dehydrogenase GroES-associated AUO97_13880 PF00107 Zinc-binding dehydrogenase AUO97_13895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_13895 PF00289 Biotin carboxylase, N-terminal domain AUO97_13895 PF02785 Biotin carboxylase C-terminal domain AUO97_13900 PF02525 Flavodoxin-like fold AUO97_13905 PF01638 HxlR-like helix-turn-helix AUO97_13915 PF01402 Ribbon-helix-helix protein, copG family AUO97_13915 PF08753 NikR C terminal nickel binding domain AUO97_13920 PF01425 Amidase AUO97_13925 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUO97_13930 PF00005 ABC transporter AUO97_13955 PF03781 Sulfatase-modifying factor enzyme 1 AUO97_14010 PF01389 OmpA-like transmembrane domain AUO97_14010 PF00691 OmpA family AUO97_14020 PF17871 AAA lid domain AUO97_14020 PF10431 C-terminal, D2-small domain, of ClpB protein AUO97_14020 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_14020 PF07724 AAA domain (Cdc48 subfamily) AUO97_14050 PF03466 LysR substrate binding domain AUO97_14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUO97_14065 PF07690 Major Facilitator Superfamily AUO97_14080 PF02677 Epoxyqueuosine reductase QueH AUO97_14090 PF00376 MerR family regulatory protein AUO97_14090 PF09278 MerR, DNA binding AUO97_14105 PF00701 Dihydrodipicolinate synthetase family AUO97_14115 PF00392 Bacterial regulatory proteins, gntR family AUO97_14120 PF05544 Proline racemase AUO97_14125 PF01266 FAD dependent oxidoreductase AUO97_14135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_14135 PF04324 BFD-like [2Fe-2S] binding domain AUO97_14145 PF00083 Sugar (and other) transporter AUO97_14150 PF00171 Aldehyde dehydrogenase family AUO97_14155 PF13520 Amino acid permease AUO97_14160 PF03313 Serine dehydratase alpha chain AUO97_14160 PF03315 Serine dehydratase beta chain AUO97_14165 PF00171 Aldehyde dehydrogenase family AUO97_14165 PF01575 MaoC like domain AUO97_14170 PF05138 Phenylacetic acid catabolic protein AUO97_14175 PF06243 Phenylacetic acid degradation B AUO97_14180 PF05138 Phenylacetic acid catabolic protein AUO97_14185 PF01883 Iron-sulfur cluster assembly protein AUO97_14190 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_14190 PF00175 Oxidoreductase NAD-binding domain AUO97_14190 PF00970 Oxidoreductase FAD-binding domain AUO97_14195 PF00378 Enoyl-CoA hydratase/isomerase AUO97_14200 PF00378 Enoyl-CoA hydratase/isomerase AUO97_14205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUO97_14205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUO97_14205 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AUO97_14210 PF02803 Thiolase, C-terminal domain AUO97_14210 PF00108 Thiolase, N-terminal domain AUO97_14215 PF00501 AMP-binding enzyme AUO97_14215 PF14535 AMP-binding enzyme C-terminal domain AUO97_14220 PF08223 PaaX-like protein C-terminal domain AUO97_14220 PF07848 PaaX-like protein AUO97_14225 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_14230 PF03061 Thioesterase superfamily AUO97_14270 PF00199 Catalase AUO97_14275 PF01292 Prokaryotic cytochrome b561 AUO97_14280 PF03466 LysR substrate binding domain AUO97_14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14285 PF02525 Flavodoxin-like fold AUO97_14290 PF09339 IclR helix-turn-helix domain AUO97_14290 PF01614 Bacterial transcriptional regulator AUO97_14295 PF01494 FAD binding domain AUO97_14300 PF01168 Alanine racemase, N-terminal domain AUO97_14300 PF00842 Alanine racemase, C-terminal domain AUO97_14305 PF00392 Bacterial regulatory proteins, gntR family AUO97_14305 PF07702 UTRA domain AUO97_14315 PF08402 TOBE domain AUO97_14315 PF00005 ABC transporter AUO97_14320 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14325 PF01266 FAD dependent oxidoreductase AUO97_14330 PF00266 Aminotransferase class-V AUO97_14335 PF13419 Haloacid dehalogenase-like hydrolase AUO97_14340 PF01810 LysE type translocator AUO97_14355 PF03466 LysR substrate binding domain AUO97_14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14360 PF00682 HMGL-like AUO97_14365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_14365 PF00364 Biotin-requiring enzyme AUO97_14365 PF02785 Biotin carboxylase C-terminal domain AUO97_14365 PF00289 Biotin carboxylase, N-terminal domain AUO97_14370 PF00378 Enoyl-CoA hydratase/isomerase AUO97_14375 PF01039 Carboxyl transferase domain AUO97_14380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_14380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_14380 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_14385 PF00440 Bacterial regulatory proteins, tetR family AUO97_14390 PF13193 AMP-binding enzyme C-terminal domain AUO97_14390 PF00501 AMP-binding enzyme AUO97_14410 PF03466 LysR substrate binding domain AUO97_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14440 PF18146 Damage-inducible protein CinA KH domain AUO97_14440 PF02464 Competence-damaged protein AUO97_14440 PF00994 Probable molybdopterin binding domain AUO97_14450 PF06628 Catalase-related immune-responsive AUO97_14450 PF00199 Catalase AUO97_14450 PF18011 C-terminal domain found in long catalases AUO97_14475 PF00717 Peptidase S24-like AUO97_14485 PF01037 Lrp/AsnC ligand binding domain AUO97_14485 PF13404 AsnC-type helix-turn-helix domain AUO97_14495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_14495 PF09308 LuxQ, periplasmic AUO97_14495 PF00512 His Kinase A (phospho-acceptor) domain AUO97_14495 PF00072 Response regulator receiver domain AUO97_14500 PF00072 Response regulator receiver domain AUO97_14510 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14515 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14520 PF00005 ABC transporter AUO97_14525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUO97_14530 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUO97_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14535 PF03466 LysR substrate binding domain AUO97_14540 PF01810 LysE type translocator AUO97_14545 PF00266 Aminotransferase class-V AUO97_14555 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_14560 PF00581 Rhodanese-like domain AUO97_14570 PF03466 LysR substrate binding domain AUO97_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14575 PF02798 Glutathione S-transferase, N-terminal domain AUO97_14580 PF14834 Glutathione S-transferase, C-terminal domain AUO97_14580 PF02798 Glutathione S-transferase, N-terminal domain AUO97_14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14585 PF03466 LysR substrate binding domain AUO97_14590 PF03788 LrgA family AUO97_14595 PF04172 LrgB-like family AUO97_14600 PF00392 Bacterial regulatory proteins, gntR family AUO97_14615 PF07690 Major Facilitator Superfamily AUO97_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14625 PF03466 LysR substrate binding domain AUO97_14630 PF16957 Malonate decarboxylase, alpha subunit, transporter AUO97_14635 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AUO97_14640 PF06857 Malonate decarboxylase delta subunit (MdcD) AUO97_14645 PF01039 Carboxyl transferase domain AUO97_14655 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AUO97_14660 PF00698 Acyl transferase domain AUO97_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14675 PF03466 LysR substrate binding domain AUO97_14680 PF00392 Bacterial regulatory proteins, gntR family AUO97_14680 PF00155 Aminotransferase class I and II AUO97_14685 PF02322 Cytochrome bd terminal oxidase subunit II AUO97_14690 PF01654 Cytochrome bd terminal oxidase subunit I AUO97_14710 PF00296 Luciferase-like monooxygenase AUO97_14715 PF00083 Sugar (and other) transporter AUO97_14725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AUO97_14730 PF00005 ABC transporter AUO97_14735 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AUO97_14745 PF01177 Asp/Glu/Hydantoin racemase AUO97_14750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AUO97_14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14760 PF03466 LysR substrate binding domain AUO97_14770 PF13382 Adenine deaminase C-terminal domain AUO97_14770 PF01979 Amidohydrolase family AUO97_14780 PF03960 ArsC family AUO97_14785 PF01022 Bacterial regulatory protein, arsR family AUO97_14790 PF01758 Sodium Bile acid symporter family AUO97_14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_14795 PF03466 LysR substrate binding domain AUO97_14810 PF13192 Thioredoxin domain AUO97_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_14825 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_14830 PF00588 SpoU rRNA Methylase family AUO97_14835 PF07733 Bacterial DNA polymerase III alpha NTPase domain AUO97_14835 PF14579 Helix-hairpin-helix motif AUO97_14835 PF01336 OB-fold nucleic acid binding domain AUO97_14835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AUO97_14835 PF02811 PHP domain AUO97_14840 PF17763 Glutaminase/Asparaginase C-terminal domain AUO97_14840 PF00710 Asparaginase, N-terminal AUO97_14845 PF00375 Sodium:dicarboxylate symporter family AUO97_14850 PF00155 Aminotransferase class I and II AUO97_14855 PF01641 SelR domain AUO97_14860 PF00255 Glutathione peroxidase AUO97_14865 PF12852 Cupin AUO97_14865 PF12833 Helix-turn-helix domain AUO97_14875 PF00155 Aminotransferase class I and II AUO97_14880 PF08335 GlnD PII-uridylyltransferase AUO97_14880 PF01909 Nucleotidyltransferase domain AUO97_14880 PF01966 HD domain AUO97_14885 PF02222 ATP-grasp domain AUO97_14895 PF05437 Branched-chain amino acid transport protein (AzlD) AUO97_14900 PF03591 AzlC protein AUO97_14925 PF01926 50S ribosome-binding GTPase AUO97_14925 PF06071 Protein of unknown function (DUF933) AUO97_14930 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14935 PF09383 NIL domain AUO97_14935 PF00005 ABC transporter AUO97_14940 PF03180 NLPA lipoprotein AUO97_14945 PF03180 NLPA lipoprotein AUO97_14950 PF00296 Luciferase-like monooxygenase AUO97_14960 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AUO97_14960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_14975 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14980 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_14985 PF00005 ABC transporter AUO97_14995 PF01037 Lrp/AsnC ligand binding domain AUO97_15000 PF01709 Transcriptional regulator AUO97_15010 PF00440 Bacterial regulatory proteins, tetR family AUO97_15030 PF03466 LysR substrate binding domain AUO97_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_15040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AUO97_15050 PF00892 EamA-like transporter family AUO97_15075 PF13953 PapC C-terminal domain AUO97_15075 PF13954 PapC N-terminal domain AUO97_15075 PF00577 Outer membrane usher protein AUO97_15080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AUO97_15080 PF02753 Pili assembly chaperone PapD, C-terminal domain AUO97_15085 PF16970 Type-1 fimbrial protein, A AUO97_15100 PF06968 Biotin and Thiamin Synthesis associated domain AUO97_15100 PF04055 Radical SAM superfamily AUO97_15105 PF08331 Domain of unknown function (DUF1730) AUO97_15110 PF01256 Carbohydrate kinase AUO97_15110 PF03853 YjeF-related protein N-terminus AUO97_15115 PF02075 Crossover junction endodeoxyribonuclease RuvC AUO97_15130 PF00905 Penicillin binding protein transpeptidase domain AUO97_15150 PF00438 S-adenosylmethionine synthetase, N-terminal domain AUO97_15150 PF02772 S-adenosylmethionine synthetase, central domain AUO97_15150 PF02773 S-adenosylmethionine synthetase, C-terminal domain AUO97_15155 PF02779 Transketolase, pyrimidine binding domain AUO97_15155 PF00456 Transketolase, thiamine diphosphate binding domain AUO97_15155 PF02780 Transketolase, C-terminal domain AUO97_15165 PF04264 YceI-like domain AUO97_15175 PF09992 Phosphodiester glycosidase AUO97_15185 PF05958 tRNA (Uracil-5-)-methyltransferase AUO97_15190 PF04229 GrpB protein AUO97_15195 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AUO97_15195 PF01619 Proline dehydrogenase AUO97_15195 PF14850 DNA-binding domain of Proline dehydrogenase AUO97_15195 PF00171 Aldehyde dehydrogenase family AUO97_15200 PF01037 Lrp/AsnC ligand binding domain AUO97_15205 PF00474 Sodium:solute symporter family AUO97_15210 PF02146 Sir2 family AUO97_15215 PF01597 Glycine cleavage H-protein AUO97_15220 PF12833 Helix-turn-helix domain AUO97_15220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AUO97_15230 PF00664 ABC transporter transmembrane region AUO97_15230 PF00005 ABC transporter AUO97_15235 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AUO97_15240 PF06912 Protein of unknown function (DUF1275) AUO97_15245 PF00375 Sodium:dicarboxylate symporter family AUO97_15260 PF08007 Cupin superfamily protein AUO97_15265 PF02545 Maf-like protein AUO97_15275 PF00162 Phosphoglycerate kinase AUO97_15285 PF01116 Fructose-bisphosphate aldolase class-II AUO97_15290 PF00639 PPIC-type PPIASE domain AUO97_15290 PF09312 SurA N-terminal domain AUO97_15295 PF04453 LPS transport system D AUO97_15295 PF03968 OstA-like protein AUO97_15300 PF01636 Phosphotransferase enzyme family AUO97_15305 PF00483 Nucleotidyl transferase AUO97_15310 PF02527 rRNA small subunit methyltransferase G AUO97_15315 PF13614 AAA domain AUO97_15320 PF02195 ParB-like nuclease domain AUO97_15320 PF17762 HTH domain found in ParB protein AUO97_15325 PF01618 MotA/TolQ/ExbB proton channel family AUO97_15335 PF00005 ABC transporter AUO97_15335 PF00664 ABC transporter transmembrane region AUO97_15340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AUO97_15345 PF02348 Cytidylyltransferase AUO97_15350 PF09115 DNA polymerase III, delta subunit, C terminal AUO97_15360 PF01026 TatD related DNase AUO97_15375 PF07963 Prokaryotic N-terminal methylation motif AUO97_15375 PF02501 Type II secretion system (T2SS), protein I AUO97_15380 PF11612 Type II secretion system (T2SS), protein J AUO97_15380 PF07963 Prokaryotic N-terminal methylation motif AUO97_15385 PF03934 Type II secretion system (T2SS), protein K AUO97_15395 PF03167 Uracil DNA glycosylase superfamily AUO97_15405 PF14437 MafB19-like deaminase AUO97_15415 PF02224 Cytidylate kinase AUO97_15420 PF00575 S1 RNA binding domain AUO97_15425 PF00216 Bacterial DNA-binding protein AUO97_15435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AUO97_15445 PF00743 Flavin-binding monooxygenase-like AUO97_15455 PF03969 AFG1-like ATPase AUO97_15460 PF02899 Phage integrase, N-terminal SAM-like domain AUO97_15460 PF00589 Phage integrase family AUO97_15530 PF03796 DnaB-like helicase C terminal domain AUO97_15530 PF00772 DnaB-like helicase N terminal domain AUO97_15615 PF04860 Phage portal protein AUO97_15725 PF01274 Malate synthase AUO97_15735 PF02472 Biopolymer transport protein ExbD/TolR AUO97_15740 PF02472 Biopolymer transport protein ExbD/TolR AUO97_15745 PF01618 MotA/TolQ/ExbB proton channel family AUO97_15755 PF00593 TonB dependent receptor AUO97_15755 PF07715 TonB-dependent Receptor Plug Domain AUO97_15770 PF01432 Peptidase family M3 AUO97_15775 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_15780 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_15785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUO97_15785 PF00005 ABC transporter AUO97_15800 PF00459 Inositol monophosphatase family AUO97_15810 PF01649 Ribosomal protein S20 AUO97_15815 PF13460 NAD(P)H-binding AUO97_15820 PF03737 Aldolase/RraA AUO97_15840 PF00271 Helicase conserved C-terminal domain AUO97_15840 PF00270 DEAD/DEAH box helicase AUO97_15840 PF03461 TRCF domain AUO97_15840 PF02559 CarD-like/TRCF domain AUO97_15840 PF17757 UvrB interaction domain AUO97_15850 PF00211 Adenylate and Guanylate cyclase catalytic domain AUO97_15855 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_15860 PF00012 Hsp70 protein AUO97_15865 PF00226 DnaJ domain AUO97_15865 PF07743 HSCB C-terminal oligomerisation domain AUO97_15870 PF01521 Iron-sulphur cluster biosynthesis AUO97_15875 PF01592 NifU-like N terminal domain AUO97_15880 PF00266 Aminotransferase class-V AUO97_15885 PF02082 Transcriptional regulator AUO97_15900 PF00216 Bacterial DNA-binding protein AUO97_15910 PF12833 Helix-turn-helix domain AUO97_15910 PF12852 Cupin AUO97_15915 PF00487 Fatty acid desaturase AUO97_15920 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_15920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_15920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_15925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_15925 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_15925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_15930 PF03109 ABC1 family AUO97_15940 PF04073 Aminoacyl-tRNA editing domain AUO97_15945 PF04183 IucA / IucC family AUO97_15945 PF06276 Ferric iron reductase FhuF-like transporter AUO97_15950 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AUO97_15955 PF07690 Major Facilitator Superfamily AUO97_15960 PF04183 IucA / IucC family AUO97_15960 PF06276 Ferric iron reductase FhuF-like transporter AUO97_15965 PF04183 IucA / IucC family AUO97_15965 PF06276 Ferric iron reductase FhuF-like transporter AUO97_15975 PF03737 Aldolase/RraA AUO97_15980 PF00593 TonB dependent receptor AUO97_15980 PF07715 TonB-dependent Receptor Plug Domain AUO97_16020 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AUO97_16025 PF02277 Phosphoribosyltransferase AUO97_16030 PF00300 Histidine phosphatase superfamily (branch 1) AUO97_16040 PF02654 Cobalamin-5-phosphate synthase AUO97_16045 PF00793 DAHP synthetase I family AUO97_16050 PF01925 Sulfite exporter TauE/SafE AUO97_16070 PF00593 TonB dependent receptor AUO97_16070 PF07715 TonB-dependent Receptor Plug Domain AUO97_16075 PF02684 Lipid-A-disaccharide synthetase AUO97_16085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_16090 PF00005 ABC transporter AUO97_16125 PF01230 HIT domain AUO97_16155 PF08241 Methyltransferase domain AUO97_16160 PF00561 alpha/beta hydrolase fold AUO97_16165 PF01053 Cys/Met metabolism PLP-dependent enzyme AUO97_16175 PF02575 YbaB/EbfC DNA-binding family AUO97_16180 PF13662 Toprim domain AUO97_16180 PF02132 RecR protein AUO97_16185 PF00570 HRDC domain AUO97_16185 PF01612 3'-5' exonuclease AUO97_16200 PF05166 YcgL domain AUO97_16210 PF01434 Peptidase family M41 AUO97_16210 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_16210 PF17862 AAA+ lid domain AUO97_16220 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_16225 PF05175 Methyltransferase small domain AUO97_16230 PF01264 Chorismate synthase AUO97_16235 PF08448 PAS fold AUO97_16235 PF00990 Diguanylate cyclase, GGDEF domain AUO97_16250 PF04055 Radical SAM superfamily AUO97_16255 PF00676 Dehydrogenase E1 component AUO97_16260 PF02780 Transketolase, C-terminal domain AUO97_16260 PF02779 Transketolase, pyrimidine binding domain AUO97_16265 PF02817 e3 binding domain AUO97_16265 PF00364 Biotin-requiring enzyme AUO97_16265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUO97_16270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_16270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUO97_16275 PF00106 short chain dehydrogenase AUO97_16280 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_16280 PF00107 Zinc-binding dehydrogenase AUO97_16285 PF01062 Bestrophin, RFP-TM, chloride channel AUO97_16290 PF00158 Sigma-54 interaction domain AUO97_16290 PF02954 Bacterial regulatory protein, Fis family AUO97_16290 PF00072 Response regulator receiver domain AUO97_16295 PF04273 Putative phosphatase (DUF442) AUO97_16295 PF00753 Metallo-beta-lactamase superfamily AUO97_16300 PF04273 Putative phosphatase (DUF442) AUO97_16300 PF00753 Metallo-beta-lactamase superfamily AUO97_16305 PF01925 Sulfite exporter TauE/SafE AUO97_16320 PF06445 GyrI-like small molecule binding domain AUO97_16320 PF12833 Helix-turn-helix domain AUO97_16325 PF01638 HxlR-like helix-turn-helix AUO97_16330 PF02525 Flavodoxin-like fold AUO97_16335 PF02417 Chromate transporter AUO97_16355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AUO97_16360 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_16365 PF00005 ABC transporter AUO97_16380 PF00083 Sugar (and other) transporter AUO97_16385 PF07715 TonB-dependent Receptor Plug Domain AUO97_16385 PF00593 TonB dependent receptor AUO97_16390 PF00206 Lyase AUO97_16390 PF10415 Fumarase C C-terminus AUO97_16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16405 PF03466 LysR substrate binding domain AUO97_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16410 PF03466 LysR substrate binding domain AUO97_16415 PF00108 Thiolase, N-terminal domain AUO97_16415 PF02803 Thiolase, C-terminal domain AUO97_16420 PF02667 Short chain fatty acid transporter AUO97_16425 PF01144 Coenzyme A transferase AUO97_16430 PF01144 Coenzyme A transferase AUO97_16435 PF03466 LysR substrate binding domain AUO97_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16455 PF00440 Bacterial regulatory proteins, tetR family AUO97_16475 PF06719 AraC-type transcriptional regulator N-terminus AUO97_16475 PF12833 Helix-turn-helix domain AUO97_16480 PF07690 Major Facilitator Superfamily AUO97_16485 PF01738 Dienelactone hydrolase family AUO97_16500 PF01613 Flavin reductase like domain AUO97_16510 PF12833 Helix-turn-helix domain AUO97_16510 PF14525 AraC-binding-like domain AUO97_16530 PF00005 ABC transporter AUO97_16530 PF17755 UvrA DNA-binding domain AUO97_16530 PF17760 UvrA interaction domain AUO97_16535 PF00873 AcrB/AcrD/AcrF family AUO97_16540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_16540 PF00529 HlyD membrane-fusion protein of T1SS AUO97_16545 PF00486 Transcriptional regulatory protein, C terminal AUO97_16545 PF00072 Response regulator receiver domain AUO97_16550 PF00512 His Kinase A (phospho-acceptor) domain AUO97_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_16550 PF16527 Two-component sensor protein CpxA, periplasmic domain AUO97_16550 PF00672 HAMP domain AUO97_16565 PF02311 AraC-like ligand binding domain AUO97_16565 PF12833 Helix-turn-helix domain AUO97_16570 PF12146 Serine aminopeptidase, S33 AUO97_16580 PF00106 short chain dehydrogenase AUO97_16605 PF13673 Acetyltransferase (GNAT) domain AUO97_16615 PF06114 IrrE N-terminal-like domain AUO97_16645 PF13291 ACT domain AUO97_16645 PF04607 Region found in RelA / SpoT proteins AUO97_16645 PF02824 TGS domain AUO97_16655 PF01975 Survival protein SurE AUO97_16680 PF07690 Major Facilitator Superfamily AUO97_16690 PF01425 Amidase AUO97_16695 PF03472 Autoinducer binding domain AUO97_16695 PF00196 Bacterial regulatory proteins, luxR family AUO97_16725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AUO97_16730 PF14572 Phosphoribosyl synthetase-associated domain AUO97_16730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AUO97_16750 PF00005 ABC transporter AUO97_16765 PF08240 Alcohol dehydrogenase GroES-like domain AUO97_16765 PF00107 Zinc-binding dehydrogenase AUO97_16770 PF12833 Helix-turn-helix domain AUO97_16770 PF06719 AraC-type transcriptional regulator N-terminus AUO97_16775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AUO97_16775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUO97_16780 PF07690 Major Facilitator Superfamily AUO97_16785 PF01370 NAD dependent epimerase/dehydratase family AUO97_16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16790 PF03466 LysR substrate binding domain AUO97_16800 PF00920 Dehydratase family AUO97_16805 PF00171 Aldehyde dehydrogenase family AUO97_16820 PF00529 HlyD membrane-fusion protein of T1SS AUO97_16820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUO97_16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16835 PF03466 LysR substrate binding domain AUO97_16845 PF08450 SMP-30/Gluconolactonase/LRE-like region AUO97_16860 PF04909 Amidohydrolase AUO97_16865 PF07690 Major Facilitator Superfamily AUO97_16870 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AUO97_16930 PF13193 AMP-binding enzyme C-terminal domain AUO97_16930 PF00501 AMP-binding enzyme AUO97_16940 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_16940 PF12806 Acetyl-CoA dehydrogenase C-terminal like AUO97_16940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_16940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_16945 PF01575 MaoC like domain AUO97_16950 PF00106 short chain dehydrogenase AUO97_16965 PF03466 LysR substrate binding domain AUO97_16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_16970 PF08359 YsiA-like protein, C-terminal region AUO97_16970 PF00440 Bacterial regulatory proteins, tetR family AUO97_16975 PF12706 Beta-lactamase superfamily domain AUO97_16985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_16995 PF13411 MerR HTH family regulatory protein AUO97_17005 PF01872 RibD C-terminal domain AUO97_17010 PF00106 short chain dehydrogenase AUO97_17015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_17015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_17020 PF00561 alpha/beta hydrolase fold AUO97_17030 PF00171 Aldehyde dehydrogenase family AUO97_17040 PF07690 Major Facilitator Superfamily AUO97_17045 PF00920 Dehydratase family AUO97_17050 PF00392 Bacterial regulatory proteins, gntR family AUO97_17050 PF07729 FCD domain AUO97_17060 PF03466 LysR substrate binding domain AUO97_17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_17065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AUO97_17065 PF13378 Enolase C-terminal domain-like AUO97_17070 PF02426 Muconolactone delta-isomerase AUO97_17075 PF04444 Catechol dioxygenase N terminus AUO97_17075 PF00775 Dioxygenase AUO97_17080 PF01144 Coenzyme A transferase AUO97_17085 PF01144 Coenzyme A transferase AUO97_17090 PF00108 Thiolase, N-terminal domain AUO97_17090 PF02803 Thiolase, C-terminal domain AUO97_17095 PF12146 Serine aminopeptidase, S33 AUO97_17100 PF01804 Penicillin amidase AUO97_17105 PF00171 Aldehyde dehydrogenase family AUO97_17115 PF02728 Copper amine oxidase, N3 domain AUO97_17115 PF01179 Copper amine oxidase, enzyme domain AUO97_17115 PF02727 Copper amine oxidase, N2 domain AUO97_17115 PF07833 Copper amine oxidase N-terminal domain AUO97_17120 PF12833 Helix-turn-helix domain AUO97_17120 PF02311 AraC-like ligand binding domain AUO97_17125 PF01613 Flavin reductase like domain AUO97_17130 PF00175 Oxidoreductase NAD-binding domain AUO97_17130 PF00111 2Fe-2S iron-sulfur cluster binding domain AUO97_17145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AUO97_17145 PF00355 Rieske [2Fe-2S] domain AUO97_17160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AUO97_17165 PF01425 Amidase AUO97_17175 PF07690 Major Facilitator Superfamily AUO97_17185 PF00106 short chain dehydrogenase AUO97_17200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_17200 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_17205 PF03466 LysR substrate binding domain AUO97_17210 PF01614 Bacterial transcriptional regulator AUO97_17210 PF09339 IclR helix-turn-helix domain AUO97_17215 PF00753 Metallo-beta-lactamase superfamily AUO97_17225 PF04143 Sulphur transport AUO97_17235 PF13360 PQQ-like domain AUO97_17235 PF01011 PQQ enzyme repeat AUO97_17240 PF04966 Carbohydrate-selective porin, OprB family AUO97_17245 PF05048 Periplasmic copper-binding protein (NosD) AUO97_17250 PF01487 Type I 3-dehydroquinase AUO97_17255 PF00775 Dioxygenase AUO97_17260 PF00775 Dioxygenase AUO97_17260 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AUO97_17265 PF02627 Carboxymuconolactone decarboxylase family AUO97_17270 PF07690 Major Facilitator Superfamily AUO97_17275 PF00561 alpha/beta hydrolase fold AUO97_17280 PF00206 Lyase AUO97_17280 PF10397 Adenylosuccinate lyase C-terminus AUO97_17285 PF00108 Thiolase, N-terminal domain AUO97_17285 PF02803 Thiolase, C-terminal domain AUO97_17290 PF01144 Coenzyme A transferase AUO97_17295 PF01144 Coenzyme A transferase AUO97_17300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AUO97_17305 PF04977 Septum formation initiator AUO97_17310 PF04239 Protein of unknown function (DUF421) AUO97_17315 PF03952 Enolase, N-terminal domain AUO97_17315 PF00113 Enolase, C-terminal TIM barrel domain AUO97_17320 PF00793 DAHP synthetase I family AUO97_17325 PF00117 Glutamine amidotransferase class-I AUO97_17325 PF06418 CTP synthase N-terminus AUO97_17355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUO97_17355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_17370 PF00793 DAHP synthetase I family AUO97_17375 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AUO97_17380 PF10431 C-terminal, D2-small domain, of ClpB protein AUO97_17380 PF00004 ATPase family associated with various cellular activities (AAA) AUO97_17380 PF07724 AAA domain (Cdc48 subfamily) AUO97_17380 PF17871 AAA lid domain AUO97_17380 PF02861 Clp amino terminal domain, pathogenicity island component AUO97_17385 PF02617 ATP-dependent Clp protease adaptor protein ClpS AUO97_17395 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUO97_17395 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUO97_17410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AUO97_17415 PF00585 C-terminal regulatory domain of Threonine dehydratase AUO97_17415 PF00291 Pyridoxal-phosphate dependent enzyme AUO97_17420 PF02080 TrkA-C domain AUO97_17420 PF02254 TrkA-N domain AUO97_17425 PF02386 Cation transport protein AUO97_17430 PF02253 Phospholipase A1 AUO97_17435 PF05193 Peptidase M16 inactive domain AUO97_17435 PF08367 Peptidase M16C associated AUO97_17435 PF00675 Insulinase (Peptidase family M16) AUO97_17440 PF07715 TonB-dependent Receptor Plug Domain AUO97_17440 PF00593 TonB dependent receptor AUO97_17445 PF00294 pfkB family carbohydrate kinase AUO97_17455 PF07290 Protein of unknown function (DUF1449) AUO97_17465 PF01654 Cytochrome bd terminal oxidase subunit I AUO97_17470 PF02322 Cytochrome bd terminal oxidase subunit II AUO97_17475 PF08173 Membrane bound YbgT-like protein AUO97_17490 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AUO97_17500 PF00448 SRP54-type protein, GTPase domain AUO97_17500 PF02881 SRP54-type protein, helical bundle domain AUO97_17530 PF00571 CBS domain AUO97_17530 PF00478 IMP dehydrogenase / GMP reductase domain AUO97_17535 PF00202 Aminotransferase class-III AUO97_17540 PF00462 Glutaredoxin AUO97_17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_17550 PF03466 LysR substrate binding domain AUO97_17555 PF00557 Metallopeptidase family M24 AUO97_17560 PF05525 Branched-chain amino acid transport protein AUO97_17585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AUO97_17585 PF00391 PEP-utilising enzyme, mobile domain AUO97_17585 PF05524 PEP-utilising enzyme, N-terminal AUO97_17585 PF02896 PEP-utilising enzyme, TIM barrel domain AUO97_17585 PF00381 PTS HPr component phosphorylation site AUO97_17590 PF00294 pfkB family carbohydrate kinase AUO97_17595 PF02378 Phosphotransferase system, EIIC AUO97_17595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AUO97_17610 PF00563 EAL domain AUO97_17610 PF00990 Diguanylate cyclase, GGDEF domain AUO97_17610 PF03707 Bacterial signalling protein N terminal repeat AUO97_17620 PF07995 Glucose / Sorbosone dehydrogenase AUO97_17625 PF02586 SOS response associated peptidase (SRAP) AUO97_17630 PF01740 STAS domain AUO97_17630 PF00916 Sulfate permease family AUO97_17635 PF05922 Peptidase inhibitor I9 AUO97_17635 PF00082 Subtilase family AUO97_17645 PF00324 Amino acid permease AUO97_17650 PF00266 Aminotransferase class-V AUO97_17655 PF01037 Lrp/AsnC ligand binding domain AUO97_17680 PF13419 Haloacid dehalogenase-like hydrolase AUO97_17685 PF01479 S4 domain AUO97_17690 PF00154 recA bacterial DNA recombination protein AUO97_17695 PF02631 RecX family AUO97_17710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AUO97_17710 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_17715 PF07977 FabA-like domain AUO97_17720 PF00132 Bacterial transferase hexapeptide (six repeats) AUO97_17720 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AUO97_17730 PF01103 Surface antigen AUO97_17730 PF07244 Surface antigen variable number repeat AUO97_17735 PF17820 PDZ domain AUO97_17735 PF13180 PDZ domain AUO97_17735 PF02163 Peptidase family M50 AUO97_17740 PF13288 DXP reductoisomerase C-terminal domain AUO97_17740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AUO97_17740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AUO97_17750 PF01255 Putative undecaprenyl diphosphate synthase AUO97_17755 PF01765 Ribosome recycling factor AUO97_17760 PF00696 Amino acid kinase family AUO97_17765 PF00919 Uncharacterized protein family UPF0004 AUO97_17765 PF18693 TRAM domain AUO97_17765 PF04055 Radical SAM superfamily AUO97_17770 PF00512 His Kinase A (phospho-acceptor) domain AUO97_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_17770 PF00989 PAS fold AUO97_17775 PF00158 Sigma-54 interaction domain AUO97_17775 PF00072 Response regulator receiver domain AUO97_17775 PF02954 Bacterial regulatory protein, Fis family AUO97_17780 PF00440 Bacterial regulatory proteins, tetR family AUO97_17785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUO97_17785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUO97_17795 PF02542 YgbB family AUO97_17805 PF01266 FAD dependent oxidoreductase AUO97_17830 PF10415 Fumarase C C-terminus AUO97_17830 PF00206 Lyase AUO97_17835 PF16363 GDP-mannose 4,6 dehydratase AUO97_17840 PF02635 DsrE/DsrF-like family AUO97_17860 PF00892 EamA-like transporter family AUO97_17865 PF00392 Bacterial regulatory proteins, gntR family AUO97_17865 PF00155 Aminotransferase class I and II AUO97_17870 PF01638 HxlR-like helix-turn-helix AUO97_17875 PF00994 Probable molybdopterin binding domain AUO97_17875 PF03453 MoeA N-terminal region (domain I and II) AUO97_17875 PF03454 MoeA C-terminal region (domain IV) AUO97_17880 PF00994 Probable molybdopterin binding domain AUO97_17880 PF01967 MoaC family AUO97_17885 PF02391 MoaE protein AUO97_17895 PF04055 Radical SAM superfamily AUO97_17895 PF06463 Molybdenum Cofactor Synthesis C AUO97_17900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AUO97_17900 PF01568 Molydopterin dinucleotide binding domain AUO97_17900 PF00384 Molybdopterin oxidoreductase AUO97_17905 PF12804 MobA-like NTP transferase domain AUO97_17910 PF00384 Molybdopterin oxidoreductase AUO97_17910 PF01568 Molydopterin dinucleotide binding domain AUO97_17910 PF04324 BFD-like [2Fe-2S] binding domain AUO97_17910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AUO97_17915 PF04324 BFD-like [2Fe-2S] binding domain AUO97_17915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AUO97_17915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AUO97_17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_17915 PF18267 Rubredoxin NAD+ reductase C-terminal domain AUO97_17920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AUO97_17920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AUO97_17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUO97_17920 PF13806 Rieske-like [2Fe-2S] domain AUO97_17920 PF18267 Rubredoxin NAD+ reductase C-terminal domain AUO97_17920 PF04324 BFD-like [2Fe-2S] binding domain AUO97_17930 PF00486 Transcriptional regulatory protein, C terminal AUO97_17930 PF00072 Response regulator receiver domain AUO97_17935 PF00005 ABC transporter AUO97_17940 PF11799 impB/mucB/samB family C-terminal domain AUO97_17940 PF00817 impB/mucB/samB family AUO97_17940 PF13438 Domain of unknown function (DUF4113) AUO97_17945 PF01220 Dehydroquinase class II AUO97_17950 PF00364 Biotin-requiring enzyme AUO97_17955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUO97_17955 PF02785 Biotin carboxylase C-terminal domain AUO97_17955 PF00289 Biotin carboxylase, N-terminal domain AUO97_17965 PF12832 MFS_1 like family AUO97_17980 PF11798 IMS family HHH motif AUO97_17980 PF11799 impB/mucB/samB family C-terminal domain AUO97_17980 PF00817 impB/mucB/samB family AUO97_17980 PF13438 Domain of unknown function (DUF4113) AUO97_18045 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AUO97_18190 PF02498 BRO family, N-terminal domain AUO97_18190 PF10548 P22AR C-terminal domain AUO97_18230 PF00145 C-5 cytosine-specific DNA methylase AUO97_18335 PF01645 Conserved region in glutamate synthase AUO97_18350 PF01565 FAD binding domain AUO97_18350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AUO97_18355 PF01451 Low molecular weight phosphotyrosine protein phosphatase AUO97_18365 PF00465 Iron-containing alcohol dehydrogenase AUO97_18370 PF03061 Thioesterase superfamily AUO97_18375 PF05506 Domain of unknown function (DUF756) AUO97_18375 PF04185 Phosphoesterase family AUO97_18380 PF12170 DNA polymerase III tau subunit V interacting with alpha AUO97_18380 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AUO97_18380 PF12169 DNA polymerase III subunits gamma and tau domain III AUO97_18385 PF07690 Major Facilitator Superfamily AUO97_18410 PF02803 Thiolase, C-terminal domain AUO97_18410 PF00108 Thiolase, N-terminal domain AUO97_18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_18420 PF03466 LysR substrate binding domain AUO97_18430 PF01810 LysE type translocator AUO97_18435 PF01037 Lrp/AsnC ligand binding domain AUO97_18440 PF03594 Benzoate membrane transport protein AUO97_18445 PF02308 MgtC family AUO97_18450 PF00689 Cation transporting ATPase, C-terminus AUO97_18450 PF00690 Cation transporter/ATPase, N-terminus AUO97_18465 PF00582 Universal stress protein family AUO97_18470 PF12848 ABC transporter AUO97_18470 PF00005 ABC transporter AUO97_18485 PF07715 TonB-dependent Receptor Plug Domain AUO97_18485 PF00593 TonB dependent receptor AUO97_18515 PF00924 Mechanosensitive ion channel AUO97_18520 PF00593 TonB dependent receptor AUO97_18520 PF07715 TonB-dependent Receptor Plug Domain AUO97_18525 PF00440 Bacterial regulatory proteins, tetR family AUO97_18540 PF01037 Lrp/AsnC ligand binding domain AUO97_18545 PF01817 Chorismate mutase type II AUO97_18570 PF00577 Outer membrane usher protein AUO97_18570 PF13954 PapC N-terminal domain AUO97_18570 PF13953 PapC C-terminal domain AUO97_18585 PF11940 Domain of unknown function (DUF3458) Ig-like fold AUO97_18585 PF01433 Peptidase family M1 domain AUO97_18585 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AUO97_18600 PF02110 Hydroxyethylthiazole kinase family AUO97_18610 PF05970 PIF1-like helicase AUO97_18610 PF14493 Helix-turn-helix domain AUO97_18615 PF00465 Iron-containing alcohol dehydrogenase AUO97_18630 PF00171 Aldehyde dehydrogenase family AUO97_18635 PF13520 Amino acid permease AUO97_18640 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AUO97_18645 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AUO97_18650 PF02540 NAD synthase AUO97_18650 PF00958 GMP synthase C terminal domain AUO97_18650 PF00117 Glutamine amidotransferase class-I AUO97_18655 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUO97_18655 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AUO97_18660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUO97_18665 PF00149 Calcineurin-like phosphoesterase AUO97_18675 PF00881 Nitroreductase family AUO97_18685 PF17209 Hfq protein AUO97_18695 PF01119 DNA mismatch repair protein, C-terminal domain AUO97_18695 PF08676 MutL C terminal dimerisation domain AUO97_18700 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AUO97_18705 PF01479 S4 domain AUO97_18705 PF00849 RNA pseudouridylate synthase AUO97_18720 PF00849 RNA pseudouridylate synthase AUO97_18720 PF01479 S4 domain AUO97_18730 PF04284 Protein of unknown function (DUF441) AUO97_18735 PF03466 LysR substrate binding domain AUO97_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_18750 PF07690 Major Facilitator Superfamily AUO97_18755 PF00520 Ion transport protein AUO97_18755 PF00027 Cyclic nucleotide-binding domain AUO97_18765 PF00330 Aconitase family (aconitate hydratase) AUO97_18765 PF11791 Aconitate B N-terminal domain AUO97_18765 PF06434 Aconitate hydratase 2 N-terminus AUO97_18785 PF07244 Surface antigen variable number repeat AUO97_18785 PF17243 POTRA domain TamA domain 1 AUO97_18785 PF01103 Surface antigen AUO97_18790 PF07690 Major Facilitator Superfamily AUO97_18795 PF03232 Ubiquinone biosynthesis protein COQ7 AUO97_18805 PF00120 Glutamine synthetase, catalytic domain AUO97_18810 PF00486 Transcriptional regulatory protein, C terminal AUO97_18810 PF00072 Response regulator receiver domain AUO97_18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUO97_18815 PF13493 Domain of unknown function (DUF4118) AUO97_18815 PF02702 Osmosensitive K+ channel His kinase sensor domain AUO97_18815 PF00512 His Kinase A (phospho-acceptor) domain AUO97_18820 PF02669 K+-transporting ATPase, c chain AUO97_18830 PF03814 Potassium-transporting ATPase A subunit AUO97_18840 PF02152 Dihydroneopterin aldolase AUO97_18845 PF03109 ABC1 family AUO97_18850 PF00899 ThiF family AUO97_18855 PF01613 Flavin reductase like domain AUO97_18860 PF13193 AMP-binding enzyme C-terminal domain AUO97_18860 PF00501 AMP-binding enzyme AUO97_18865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUO97_18865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUO97_18865 PF02770 Acyl-CoA dehydrogenase, middle domain AUO97_18870 PF00106 short chain dehydrogenase AUO97_18875 PF12833 Helix-turn-helix domain AUO97_18880 PF13847 Methyltransferase domain AUO97_18880 PF17827 PrmC N-terminal domain AUO97_18885 PF03462 PCRF domain AUO97_18885 PF00472 RF-1 domain AUO97_18895 PF03466 LysR substrate binding domain AUO97_18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUO97_18915 PF00296 Luciferase-like monooxygenase AUO97_18925 PF13994 PgaD-like protein AUO97_18930 PF00535 Glycosyl transferase family 2 AUO97_18935 PF14883 Hypothetical glycosyl hydrolase family 13 AUO97_18935 PF01522 Polysaccharide deacetylase AUO97_18945 PF03618 Kinase/pyrophosphorylase AUO97_18950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AUO97_18950 PF02896 PEP-utilising enzyme, TIM barrel domain AUO97_18950 PF00391 PEP-utilising enzyme, mobile domain AUO97_18960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AUO97_18960 PF06481 COX Aromatic Rich Motif AUO97_18965 PF00115 Cytochrome C and Quinol oxidase polypeptide I AUO97_18970 PF00510 Cytochrome c oxidase subunit III AUO97_18975 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AUO97_18980 PF01040 UbiA prenyltransferase family AUO97_18985 PF01250 Ribosomal protein S6 AUO97_18990 PF01084 Ribosomal protein S18 AUO97_18995 PF01281 Ribosomal protein L9, N-terminal domain AUO97_18995 PF03948 Ribosomal protein L9, C-terminal domain AUO97_19000 PF03796 DnaB-like helicase C terminal domain AUO97_19000 PF00772 DnaB-like helicase N terminal domain AUO97_19005 PF00842 Alanine racemase, C-terminal domain AUO97_19005 PF01168 Alanine racemase, N-terminal domain AUO97_19015 PF01841 Transglutaminase-like superfamily AUO97_19015 PF08379 Bacterial transglutaminase-like N-terminal region AUO97_19025 PF14403 Circularly permuted ATP-grasp type 2 AUO97_19035 PF13932 GidA associated domain AUO97_19035 PF01134 Glucose inhibited division protein A AUO97_19055 PF02954 Bacterial regulatory protein, Fis family AUO97_19060 PF01808 AICARFT/IMPCHase bienzyme AUO97_19060 PF02142 MGS-like domain AUO97_19065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AUO97_19065 PF02843 Phosphoribosylglycinamide synthetase, C domain AUO97_19065 PF02844 Phosphoribosylglycinamide synthetase, N domain AUO97_19070 PF03180 NLPA lipoprotein AUO97_19075 PF00005 ABC transporter AUO97_19075 PF09383 NIL domain AUO97_19080 PF00528 Binding-protein-dependent transport system inner membrane component AUO97_19085 PF16123 Hydroxyacylglutathione hydrolase C-terminus AUO97_19085 PF00753 Metallo-beta-lactamase superfamily AUO97_19095 PF00375 Sodium:dicarboxylate symporter family AUO97_19115 PF07995 Glucose / Sorbosone dehydrogenase AUO97_19120 PF00892 EamA-like transporter family AUO97_19125 PF01177 Asp/Glu/Hydantoin racemase AUO97_19140 PF02470 MlaD protein AUO97_19145 PF04403 Paraquat-inducible protein A AUO97_19175 PF00293 NUDIX domain AUO97_19180 PF08946 Osmosensory transporter coiled coil AUO97_19180 PF00083 Sugar (and other) transporter AUO97_19230 PF07729 FCD domain AUO97_19230 PF00392 Bacterial regulatory proteins, gntR family AUO97_19240 PF03616 Sodium/glutamate symporter