locus-tag class description HYI42_00060 PF16970 Type-1 fimbrial protein, A HYI42_00065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HYI42_00065 PF02753 Pili assembly chaperone PapD, C-terminal domain HYI42_00070 PF00577 Outer membrane usher protein HYI42_00070 PF13954 PapC N-terminal domain HYI42_00070 PF13953 PapC C-terminal domain HYI42_00085 PF00107 Zinc-binding dehydrogenase HYI42_00085 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_00095 PF00199 Catalase HYI42_00110 PF13091 PLD-like domain HYI42_00115 PF13091 PLD-like domain HYI42_00140 PF04055 Radical SAM superfamily HYI42_00140 PF13186 Iron-sulfur cluster-binding domain HYI42_00145 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HYI42_00150 PF03070 TENA/THI-4/PQQC family HYI42_00155 PF12706 Beta-lactamase superfamily domain HYI42_00160 PF08042 PqqA family HYI42_00165 PF13090 Polyphosphate kinase C-terminal domain 2 HYI42_00165 PF02503 Polyphosphate kinase middle domain HYI42_00165 PF13089 Polyphosphate kinase N-terminal domain HYI42_00165 PF17941 Polyphosphate kinase C-terminal domain 1 HYI42_00170 PF00149 Calcineurin-like phosphoesterase HYI42_00180 PF00550 Phosphopantetheine attachment site HYI42_00180 PF00857 Isochorismatase family HYI42_00185 PF00106 short chain dehydrogenase HYI42_00195 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_00205 PF03459 TOBE domain HYI42_00210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HYI42_00210 PF00355 Rieske [2Fe-2S] domain HYI42_00215 PF00866 Ring hydroxylating beta subunit HYI42_00220 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_00220 PF00970 Oxidoreductase FAD-binding domain HYI42_00220 PF00175 Oxidoreductase NAD-binding domain HYI42_00230 PF14525 AraC-binding-like domain HYI42_00230 PF12833 Helix-turn-helix domain HYI42_00240 PF01613 Flavin reductase like domain HYI42_00255 PF01738 Dienelactone hydrolase family HYI42_00260 PF07690 Major Facilitator Superfamily HYI42_00290 PF01144 Coenzyme A transferase HYI42_00295 PF01144 Coenzyme A transferase HYI42_00300 PF02667 Short chain fatty acid transporter HYI42_00305 PF02803 Thiolase, C-terminal domain HYI42_00305 PF00108 Thiolase, N-terminal domain HYI42_00310 PF03466 LysR substrate binding domain HYI42_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_00330 PF10415 Fumarase C C-terminus HYI42_00330 PF00206 Lyase HYI42_00340 PF00083 Sugar (and other) transporter HYI42_00355 PF00005 ABC transporter HYI42_00360 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_00365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HYI42_00380 PF07702 UTRA domain HYI42_00380 PF00392 Bacterial regulatory proteins, gntR family HYI42_00390 PF02525 Flavodoxin-like fold HYI42_00395 PF01638 HxlR-like helix-turn-helix HYI42_00400 PF06445 GyrI-like small molecule binding domain HYI42_00400 PF12833 Helix-turn-helix domain HYI42_00415 PF01925 Sulfite exporter TauE/SafE HYI42_00420 PF04273 Putative phosphatase (DUF442) HYI42_00420 PF00753 Metallo-beta-lactamase superfamily HYI42_00425 PF04273 Putative phosphatase (DUF442) HYI42_00425 PF00753 Metallo-beta-lactamase superfamily HYI42_00430 PF02954 Bacterial regulatory protein, Fis family HYI42_00430 PF00072 Response regulator receiver domain HYI42_00430 PF00158 Sigma-54 interaction domain HYI42_00435 PF01062 Bestrophin, RFP-TM, chloride channel HYI42_00440 PF00107 Zinc-binding dehydrogenase HYI42_00440 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_00445 PF00106 short chain dehydrogenase HYI42_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_00450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYI42_00455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HYI42_00455 PF00364 Biotin-requiring enzyme HYI42_00455 PF02817 e3 binding domain HYI42_00460 PF02779 Transketolase, pyrimidine binding domain HYI42_00460 PF02780 Transketolase, C-terminal domain HYI42_00465 PF00676 Dehydrogenase E1 component HYI42_00470 PF04055 Radical SAM superfamily HYI42_00485 PF00990 Diguanylate cyclase, GGDEF domain HYI42_00485 PF08448 PAS fold HYI42_00490 PF01264 Chorismate synthase HYI42_00495 PF05175 Methyltransferase small domain HYI42_00500 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_00510 PF01434 Peptidase family M41 HYI42_00510 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_00510 PF17862 AAA+ lid domain HYI42_00520 PF05166 YcgL domain HYI42_00540 PF01612 3'-5' exonuclease HYI42_00540 PF00570 HRDC domain HYI42_00545 PF13662 Toprim domain HYI42_00545 PF02132 RecR protein HYI42_00550 PF02575 YbaB/EbfC DNA-binding family HYI42_00560 PF01053 Cys/Met metabolism PLP-dependent enzyme HYI42_00570 PF08241 Methyltransferase domain HYI42_00600 PF01230 HIT domain HYI42_00625 PF02684 Lipid-A-disaccharide synthetase HYI42_00630 PF00593 TonB dependent receptor HYI42_00630 PF07715 TonB-dependent Receptor Plug Domain HYI42_00650 PF01925 Sulfite exporter TauE/SafE HYI42_00655 PF00793 DAHP synthetase I family HYI42_00670 PF00300 Histidine phosphatase superfamily (branch 1) HYI42_00675 PF02277 Phosphoribosyltransferase HYI42_00680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HYI42_00690 PF13419 Haloacid dehalogenase-like hydrolase HYI42_00715 PF00593 TonB dependent receptor HYI42_00715 PF07715 TonB-dependent Receptor Plug Domain HYI42_00720 PF03737 Aldolase/RraA HYI42_00730 PF04183 IucA / IucC family HYI42_00730 PF06276 Ferric iron reductase FhuF-like transporter HYI42_00735 PF04183 IucA / IucC family HYI42_00735 PF06276 Ferric iron reductase FhuF-like transporter HYI42_00740 PF07690 Major Facilitator Superfamily HYI42_00750 PF04183 IucA / IucC family HYI42_00750 PF06276 Ferric iron reductase FhuF-like transporter HYI42_00755 PF04073 Aminoacyl-tRNA editing domain HYI42_00765 PF03109 ABC1 family HYI42_00770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_00770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_00770 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_00775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_00775 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_00775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_00780 PF00487 Fatty acid desaturase HYI42_00785 PF12852 Cupin HYI42_00785 PF12833 Helix-turn-helix domain HYI42_00790 PF09312 SurA N-terminal domain HYI42_00790 PF00639 PPIC-type PPIASE domain HYI42_00795 PF00216 Bacterial DNA-binding protein HYI42_00810 PF02082 Transcriptional regulator HYI42_00815 PF00266 Aminotransferase class-V HYI42_00820 PF01592 NifU-like N terminal domain HYI42_00825 PF01521 Iron-sulphur cluster biosynthesis HYI42_00830 PF00226 DnaJ domain HYI42_00830 PF07743 HSCB C-terminal oligomerisation domain HYI42_00835 PF00012 Hsp70 protein HYI42_00840 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_00845 PF00211 Adenylate and Guanylate cyclase catalytic domain HYI42_00865 PF03461 TRCF domain HYI42_00865 PF00270 DEAD/DEAH box helicase HYI42_00865 PF02559 CarD-like/TRCF domain HYI42_00865 PF00271 Helicase conserved C-terminal domain HYI42_00865 PF17757 UvrB interaction domain HYI42_00885 PF03737 Aldolase/RraA HYI42_00895 PF01649 Ribosomal protein S20 HYI42_00905 PF00459 Inositol monophosphatase family HYI42_00920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYI42_00920 PF00005 ABC transporter HYI42_00925 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_00930 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_00935 PF01432 Peptidase family M3 HYI42_00950 PF00593 TonB dependent receptor HYI42_00950 PF07715 TonB-dependent Receptor Plug Domain HYI42_00955 PF03544 Gram-negative bacterial TonB protein C-terminal HYI42_00960 PF01618 MotA/TolQ/ExbB proton channel family HYI42_00965 PF02472 Biopolymer transport protein ExbD/TolR HYI42_00970 PF02472 Biopolymer transport protein ExbD/TolR HYI42_00980 PF01274 Malate synthase HYI42_00985 PF03969 AFG1-like ATPase HYI42_00995 PF00743 Flavin-binding monooxygenase-like HYI42_01005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HYI42_01015 PF00216 Bacterial DNA-binding protein HYI42_01020 PF00575 S1 RNA binding domain HYI42_01025 PF02224 Cytidylate kinase HYI42_01035 PF14437 MafB19-like deaminase HYI42_01045 PF03167 Uracil DNA glycosylase superfamily HYI42_01055 PF03934 Type II secretion system (T2SS), protein K HYI42_01060 PF11612 Type II secretion system (T2SS), protein J HYI42_01060 PF07963 Prokaryotic N-terminal methylation motif HYI42_01065 PF02501 Type II secretion system (T2SS), protein I HYI42_01065 PF07963 Prokaryotic N-terminal methylation motif HYI42_01080 PF01026 TatD related DNase HYI42_01090 PF09115 DNA polymerase III, delta subunit, C terminal HYI42_01095 PF02348 Cytidylyltransferase HYI42_01100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HYI42_01105 PF00005 ABC transporter HYI42_01105 PF00664 ABC transporter transmembrane region HYI42_01115 PF01618 MotA/TolQ/ExbB proton channel family HYI42_01120 PF17762 HTH domain found in ParB protein HYI42_01120 PF02195 ParB-like nuclease domain HYI42_01125 PF13614 AAA domain HYI42_01130 PF02527 rRNA small subunit methyltransferase G HYI42_01135 PF00483 Nucleotidyl transferase HYI42_01140 PF01636 Phosphotransferase enzyme family HYI42_01145 PF03968 OstA-like protein HYI42_01145 PF04453 LPS transport system D HYI42_01150 PF09312 SurA N-terminal domain HYI42_01150 PF00639 PPIC-type PPIASE domain HYI42_01155 PF01116 Fructose-bisphosphate aldolase class-II HYI42_01165 PF00162 Phosphoglycerate kinase HYI42_01175 PF02545 Maf-like protein HYI42_01180 PF08007 Cupin superfamily protein HYI42_01195 PF00375 Sodium:dicarboxylate symporter family HYI42_01200 PF06912 Protein of unknown function (DUF1275) HYI42_01205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HYI42_01220 PF12833 Helix-turn-helix domain HYI42_01220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HYI42_01225 PF01597 Glycine cleavage H-protein HYI42_01230 PF02146 Sir2 family HYI42_01235 PF00474 Sodium:solute symporter family HYI42_01240 PF01037 Lrp/AsnC ligand binding domain HYI42_01245 PF01619 Proline dehydrogenase HYI42_01245 PF00171 Aldehyde dehydrogenase family HYI42_01245 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HYI42_01245 PF14850 DNA-binding domain of Proline dehydrogenase HYI42_01255 PF05958 tRNA (Uracil-5-)-methyltransferase HYI42_01275 PF04264 YceI-like domain HYI42_01285 PF00456 Transketolase, thiamine diphosphate binding domain HYI42_01285 PF02780 Transketolase, C-terminal domain HYI42_01285 PF02779 Transketolase, pyrimidine binding domain HYI42_01290 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYI42_01290 PF02772 S-adenosylmethionine synthetase, central domain HYI42_01290 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYI42_01310 PF00905 Penicillin binding protein transpeptidase domain HYI42_01325 PF02075 Crossover junction endodeoxyribonuclease RuvC HYI42_01330 PF03853 YjeF-related protein N-terminus HYI42_01330 PF01256 Carbohydrate kinase HYI42_01335 PF08331 Domain of unknown function (DUF1730) HYI42_01340 PF06968 Biotin and Thiamin Synthesis associated domain HYI42_01340 PF04055 Radical SAM superfamily HYI42_01355 PF16970 Type-1 fimbrial protein, A HYI42_01385 PF00892 EamA-like transporter family HYI42_01395 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HYI42_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_01405 PF03466 LysR substrate binding domain HYI42_01435 PF01709 Transcriptional regulator HYI42_01440 PF01037 Lrp/AsnC ligand binding domain HYI42_01450 PF00005 ABC transporter HYI42_01455 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01460 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HYI42_01475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_01485 PF00296 Luciferase-like monooxygenase HYI42_01490 PF03180 NLPA lipoprotein HYI42_01500 PF00005 ABC transporter HYI42_01500 PF09383 NIL domain HYI42_01505 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01510 PF01926 50S ribosome-binding GTPase HYI42_01510 PF06071 Protein of unknown function (DUF933) HYI42_01535 PF03591 AzlC protein HYI42_01540 PF05437 Branched-chain amino acid transport protein (AzlD) HYI42_01550 PF02222 ATP-grasp domain HYI42_01555 PF01909 Nucleotidyltransferase domain HYI42_01555 PF08335 GlnD PII-uridylyltransferase HYI42_01555 PF01966 HD domain HYI42_01560 PF00155 Aminotransferase class I and II HYI42_01570 PF12852 Cupin HYI42_01570 PF12833 Helix-turn-helix domain HYI42_01575 PF00255 Glutathione peroxidase HYI42_01580 PF01641 SelR domain HYI42_01585 PF00155 Aminotransferase class I and II HYI42_01590 PF00375 Sodium:dicarboxylate symporter family HYI42_01595 PF00710 Asparaginase, N-terminal HYI42_01595 PF17763 Glutaminase/Asparaginase C-terminal domain HYI42_01600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYI42_01600 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYI42_01600 PF14579 Helix-hairpin-helix motif HYI42_01600 PF01336 OB-fold nucleic acid binding domain HYI42_01600 PF02811 PHP domain HYI42_01605 PF00588 SpoU rRNA Methylase family HYI42_01610 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_01625 PF13192 Thioredoxin domain HYI42_01625 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_01640 PF03466 LysR substrate binding domain HYI42_01645 PF01758 Sodium Bile acid symporter family HYI42_01650 PF01022 Bacterial regulatory protein, arsR family HYI42_01655 PF03960 ArsC family HYI42_01665 PF01979 Amidohydrolase family HYI42_01665 PF13382 Adenine deaminase C-terminal domain HYI42_01685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HYI42_01690 PF01177 Asp/Glu/Hydantoin racemase HYI42_01695 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HYI42_01700 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01705 PF00005 ABC transporter HYI42_01710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HYI42_01720 PF00083 Sugar (and other) transporter HYI42_01725 PF00296 Luciferase-like monooxygenase HYI42_01740 PF01654 Cytochrome bd terminal oxidase subunit I HYI42_01745 PF02322 Cytochrome bd terminal oxidase subunit II HYI42_01755 PF00392 Bacterial regulatory proteins, gntR family HYI42_01755 PF00155 Aminotransferase class I and II HYI42_01775 PF00698 Acyl transferase domain HYI42_01780 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HYI42_01790 PF01039 Carboxyl transferase domain HYI42_01795 PF06857 Malonate decarboxylase delta subunit (MdcD) HYI42_01800 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HYI42_01805 PF16957 Malonate decarboxylase, alpha subunit, transporter HYI42_01810 PF07690 Major Facilitator Superfamily HYI42_01825 PF00392 Bacterial regulatory proteins, gntR family HYI42_01830 PF04172 LrgB-like family HYI42_01835 PF03788 LrgA family HYI42_01840 PF03466 LysR substrate binding domain HYI42_01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_01845 PF02798 Glutathione S-transferase, N-terminal domain HYI42_01845 PF14834 Glutathione S-transferase, C-terminal domain HYI42_01850 PF02798 Glutathione S-transferase, N-terminal domain HYI42_01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_01855 PF03466 LysR substrate binding domain HYI42_01865 PF00581 Rhodanese-like domain HYI42_01870 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_01880 PF00266 Aminotransferase class-V HYI42_01885 PF01810 LysE type translocator HYI42_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_01890 PF03466 LysR substrate binding domain HYI42_01900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYI42_01905 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYI42_01910 PF00005 ABC transporter HYI42_01915 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01920 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_01935 PF00072 Response regulator receiver domain HYI42_01940 PF00072 Response regulator receiver domain HYI42_01940 PF00512 His Kinase A (phospho-acceptor) domain HYI42_01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_01940 PF09308 LuxQ, periplasmic HYI42_01950 PF01037 Lrp/AsnC ligand binding domain HYI42_01950 PF13404 AsnC-type helix-turn-helix domain HYI42_01960 PF00717 Peptidase S24-like HYI42_01985 PF06628 Catalase-related immune-responsive HYI42_01985 PF18011 C-terminal domain found in long catalases HYI42_01985 PF00199 Catalase HYI42_01995 PF00994 Probable molybdopterin binding domain HYI42_01995 PF02464 Competence-damaged protein HYI42_01995 PF18146 Damage-inducible protein CinA KH domain HYI42_02030 PF03466 LysR substrate binding domain HYI42_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_02050 PF13193 AMP-binding enzyme C-terminal domain HYI42_02050 PF00501 AMP-binding enzyme HYI42_02055 PF00440 Bacterial regulatory proteins, tetR family HYI42_02060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_02060 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_02060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_02065 PF01039 Carboxyl transferase domain HYI42_02070 PF00378 Enoyl-CoA hydratase/isomerase HYI42_02075 PF00289 Biotin carboxylase, N-terminal domain HYI42_02075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_02075 PF18140 Propionyl-coenzyme A carboxylase BT domain HYI42_02075 PF02785 Biotin carboxylase C-terminal domain HYI42_02075 PF00364 Biotin-requiring enzyme HYI42_02080 PF00682 HMGL-like HYI42_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_02085 PF03466 LysR substrate binding domain HYI42_02100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_02100 PF12806 Acetyl-CoA dehydrogenase C-terminal like HYI42_02100 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_02100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_02110 PF07690 Major Facilitator Superfamily HYI42_02120 PF01144 Coenzyme A transferase HYI42_02125 PF01144 Coenzyme A transferase HYI42_02130 PF07690 Major Facilitator Superfamily HYI42_02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_02135 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_02135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_02140 PF00378 Enoyl-CoA hydratase/isomerase HYI42_02150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYI42_02150 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HYI42_02150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYI42_02155 PF00108 Thiolase, N-terminal domain HYI42_02155 PF02803 Thiolase, C-terminal domain HYI42_02160 PF09339 IclR helix-turn-helix domain HYI42_02165 PF07690 Major Facilitator Superfamily HYI42_02170 PF03060 Nitronate monooxygenase HYI42_02175 PF00378 Enoyl-CoA hydratase/isomerase HYI42_02180 PF09339 IclR helix-turn-helix domain HYI42_02185 PF02515 CoA-transferase family III HYI42_02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_02190 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_02195 PF07690 Major Facilitator Superfamily HYI42_02200 PF13419 Haloacid dehalogenase-like hydrolase HYI42_02205 PF00266 Aminotransferase class-V HYI42_02210 PF01266 FAD dependent oxidoreductase HYI42_02215 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_02220 PF08402 TOBE domain HYI42_02220 PF00005 ABC transporter HYI42_02230 PF00392 Bacterial regulatory proteins, gntR family HYI42_02230 PF07702 UTRA domain HYI42_02235 PF01494 FAD binding domain HYI42_02240 PF01614 Bacterial transcriptional regulator HYI42_02240 PF09339 IclR helix-turn-helix domain HYI42_02245 PF02525 Flavodoxin-like fold HYI42_02250 PF03466 LysR substrate binding domain HYI42_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_02255 PF02627 Carboxymuconolactone decarboxylase family HYI42_02260 PF00171 Aldehyde dehydrogenase family HYI42_02270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HYI42_02280 PF00171 Aldehyde dehydrogenase family HYI42_02285 PF00296 Luciferase-like monooxygenase HYI42_02290 PF01613 Flavin reductase like domain HYI42_02295 PF12697 Alpha/beta hydrolase family HYI42_02315 PF01292 Prokaryotic cytochrome b561 HYI42_02320 PF00199 Catalase HYI42_02330 PF07690 Major Facilitator Superfamily HYI42_02335 PF00682 HMGL-like HYI42_02340 PF02515 CoA-transferase family III HYI42_02410 PF02463 RecF/RecN/SMC N terminal domain HYI42_02415 PF03061 Thioesterase superfamily HYI42_02420 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_02425 PF08223 PaaX-like protein C-terminal domain HYI42_02425 PF07848 PaaX-like protein HYI42_02430 PF00501 AMP-binding enzyme HYI42_02430 PF14535 AMP-binding enzyme C-terminal domain HYI42_02435 PF02803 Thiolase, C-terminal domain HYI42_02435 PF00108 Thiolase, N-terminal domain HYI42_02440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYI42_02440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYI42_02440 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HYI42_02445 PF00378 Enoyl-CoA hydratase/isomerase HYI42_02450 PF00378 Enoyl-CoA hydratase/isomerase HYI42_02455 PF00175 Oxidoreductase NAD-binding domain HYI42_02455 PF00970 Oxidoreductase FAD-binding domain HYI42_02455 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_02460 PF01883 Iron-sulfur cluster assembly protein HYI42_02465 PF05138 Phenylacetic acid catabolic protein HYI42_02470 PF06243 Phenylacetic acid degradation B HYI42_02475 PF05138 Phenylacetic acid catabolic protein HYI42_02480 PF00171 Aldehyde dehydrogenase family HYI42_02480 PF01575 MaoC like domain HYI42_02485 PF03315 Serine dehydratase beta chain HYI42_02485 PF03313 Serine dehydratase alpha chain HYI42_02490 PF13520 Amino acid permease HYI42_02495 PF00171 Aldehyde dehydrogenase family HYI42_02500 PF00083 Sugar (and other) transporter HYI42_02510 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_02510 PF04324 BFD-like [2Fe-2S] binding domain HYI42_02520 PF01266 FAD dependent oxidoreductase HYI42_02525 PF05544 Proline racemase HYI42_02530 PF00392 Bacterial regulatory proteins, gntR family HYI42_02540 PF00701 Dihydrodipicolinate synthetase family HYI42_02550 PF09278 MerR, DNA binding HYI42_02550 PF00376 MerR family regulatory protein HYI42_02560 PF02677 Epoxyqueuosine reductase QueH HYI42_02575 PF07690 Major Facilitator Superfamily HYI42_02580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYI42_02590 PF03466 LysR substrate binding domain HYI42_02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_02630 PF01389 OmpA-like transmembrane domain HYI42_02630 PF00691 OmpA family HYI42_02695 PF00005 ABC transporter HYI42_02700 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYI42_02705 PF01425 Amidase HYI42_02710 PF01402 Ribbon-helix-helix protein, copG family HYI42_02710 PF08753 NikR C terminal nickel binding domain HYI42_02720 PF01638 HxlR-like helix-turn-helix HYI42_02725 PF02525 Flavodoxin-like fold HYI42_02730 PF02785 Biotin carboxylase C-terminal domain HYI42_02730 PF00289 Biotin carboxylase, N-terminal domain HYI42_02730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_02745 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_02745 PF13823 Alcohol dehydrogenase GroES-associated HYI42_02745 PF00107 Zinc-binding dehydrogenase HYI42_02755 PF00440 Bacterial regulatory proteins, tetR family HYI42_02780 PF00654 Voltage gated chloride channel HYI42_02785 PF00364 Biotin-requiring enzyme HYI42_02785 PF00289 Biotin carboxylase, N-terminal domain HYI42_02785 PF02785 Biotin carboxylase C-terminal domain HYI42_02785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_02795 PF07286 Protein of unknown function (DUF1445) HYI42_02800 PF03746 LamB/YcsF family HYI42_02805 PF01566 Natural resistance-associated macrophage protein HYI42_02810 PF03466 LysR substrate binding domain HYI42_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_02840 PF14220 Domain of unknown function (DUF4329) HYI42_02840 PF03527 RHS protein HYI42_02840 PF05593 RHS Repeat HYI42_02845 PF16671 Actin cross-linking domain HYI42_02845 PF04717 Type VI secretion system, phage-baseplate injector HYI42_02870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYI42_02870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYI42_02900 PF03279 Bacterial lipid A biosynthesis acyltransferase HYI42_02910 PF00892 EamA-like transporter family HYI42_02915 PF01037 Lrp/AsnC ligand binding domain HYI42_02920 PF01624 MutS domain I HYI42_02920 PF05188 MutS domain II HYI42_02920 PF05192 MutS domain III HYI42_02920 PF05190 MutS family domain IV HYI42_02920 PF00488 MutS domain V HYI42_02930 PF00037 4Fe-4S binding domain HYI42_02930 PF11953 Domain of unknown function (DUF3470) HYI42_02940 PF01596 O-methyltransferase HYI42_02950 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_02965 PF03412 Peptidase C39 family HYI42_02965 PF00005 ABC transporter HYI42_02965 PF00664 ABC transporter transmembrane region HYI42_02970 PF02321 Outer membrane efflux protein HYI42_02975 PF00005 ABC transporter HYI42_02975 PF12399 Branched-chain amino acid ATP-binding cassette transporter HYI42_02980 PF03968 OstA-like protein HYI42_02995 PF00571 CBS domain HYI42_02995 PF01380 SIS domain HYI42_03000 PF09190 DALR domain HYI42_03000 PF01406 tRNA synthetases class I (C) catalytic domain HYI42_03065 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) HYI42_03085 PF06381 Protein of unknown function (DUF1073) HYI42_03155 PF01638 HxlR-like helix-turn-helix HYI42_03160 PF07690 Major Facilitator Superfamily HYI42_03185 PF14748 Pyrroline-5-carboxylate reductase dimerisation HYI42_03185 PF03807 NADP oxidoreductase coenzyme F420-dependent HYI42_03195 PF00313 'Cold-shock' DNA-binding domain HYI42_03230 PF13742 OB-fold nucleic acid binding domain HYI42_03230 PF02601 Exonuclease VII, large subunit HYI42_03265 PF00376 MerR family regulatory protein HYI42_03265 PF09278 MerR, DNA binding HYI42_03270 PF00403 Heavy-metal-associated domain HYI42_03275 PF00403 Heavy-metal-associated domain HYI42_03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_03280 PF03466 LysR substrate binding domain HYI42_03285 PF00355 Rieske [2Fe-2S] domain HYI42_03285 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HYI42_03290 PF00866 Ring hydroxylating beta subunit HYI42_03295 PF00970 Oxidoreductase FAD-binding domain HYI42_03295 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_03295 PF00175 Oxidoreductase NAD-binding domain HYI42_03300 PF00106 short chain dehydrogenase HYI42_03305 PF03594 Benzoate membrane transport protein HYI42_03310 PF07690 Major Facilitator Superfamily HYI42_03320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYI42_03320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYI42_03325 PF11898 Domain of unknown function (DUF3418) HYI42_03325 PF04408 Helicase associated domain (HA2) HYI42_03325 PF00271 Helicase conserved C-terminal domain HYI42_03325 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HYI42_03325 PF00270 DEAD/DEAH box helicase HYI42_03330 PF10417 C-terminal domain of 1-Cys peroxiredoxin HYI42_03330 PF00578 AhpC/TSA family HYI42_03350 PF13192 Thioredoxin domain HYI42_03350 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_03360 PF00043 Glutathione S-transferase, C-terminal domain HYI42_03360 PF02798 Glutathione S-transferase, N-terminal domain HYI42_03370 PF02390 Putative methyltransferase HYI42_03375 PF13417 Glutathione S-transferase, N-terminal domain HYI42_03375 PF00043 Glutathione S-transferase, C-terminal domain HYI42_03385 PF13488 Glycine zipper HYI42_03385 PF00691 OmpA family HYI42_03390 PF01979 Amidohydrolase family HYI42_03395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYI42_03395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYI42_03405 PF02926 THUMP domain HYI42_03405 PF10672 S-adenosylmethionine-dependent methyltransferase HYI42_03405 PF01170 Putative RNA methylase family UPF0020 HYI42_03420 PF02861 Clp amino terminal domain, pathogenicity island component HYI42_03420 PF17871 AAA lid domain HYI42_03420 PF07724 AAA domain (Cdc48 subfamily) HYI42_03420 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_03420 PF10431 C-terminal, D2-small domain, of ClpB protein HYI42_03435 PF02566 OsmC-like protein HYI42_03440 PF00027 Cyclic nucleotide-binding domain HYI42_03440 PF13545 Crp-like helix-turn-helix domain HYI42_03445 PF00248 Aldo/keto reductase family HYI42_03460 PF00709 Adenylosuccinate synthetase HYI42_03465 PF13393 Histidyl-tRNA synthetase HYI42_03470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYI42_03470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYI42_03475 PF01411 tRNA synthetases class II (A) HYI42_03475 PF02272 DHHA1 domain HYI42_03475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYI42_03500 PF00717 Peptidase S24-like HYI42_03575 PF02767 DNA polymerase III beta subunit, central domain HYI42_03575 PF00712 DNA polymerase III beta subunit, N-terminal domain HYI42_03575 PF02768 DNA polymerase III beta subunit, C-terminal domain HYI42_03785 PF01695 IstB-like ATP binding protein HYI42_03795 PF00145 C-5 cytosine-specific DNA methylase HYI42_03865 PF00929 Exonuclease HYI42_03905 PF01842 ACT domain HYI42_03905 PF13840 ACT domain HYI42_03905 PF00696 Amino acid kinase family HYI42_03910 PF02599 Global regulator protein family HYI42_03915 PF01351 Ribonuclease HII HYI42_03925 PF01292 Prokaryotic cytochrome b561 HYI42_03930 PF00962 Adenosine/AMP deaminase HYI42_03935 PF00860 Permease family HYI42_03945 PF00743 Flavin-binding monooxygenase-like HYI42_03950 PF00106 short chain dehydrogenase HYI42_03960 PF02678 Pirin HYI42_03960 PF17954 Quercetinase C-terminal cupin domain HYI42_03975 PF00106 short chain dehydrogenase HYI42_03980 PF00743 Flavin-binding monooxygenase-like HYI42_03985 PF04072 Leucine carboxyl methyltransferase HYI42_03990 PF12833 Helix-turn-helix domain HYI42_03990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HYI42_03995 PF00743 Flavin-binding monooxygenase-like HYI42_04000 PF00106 short chain dehydrogenase HYI42_04005 PF07859 alpha/beta hydrolase fold HYI42_04010 PF05199 GMC oxidoreductase HYI42_04015 PF03573 outer membrane porin, OprD family HYI42_04020 PF07690 Major Facilitator Superfamily HYI42_04025 PF00355 Rieske [2Fe-2S] domain HYI42_04030 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_04030 PF00175 Oxidoreductase NAD-binding domain HYI42_04045 PF07690 Major Facilitator Superfamily HYI42_04050 PF00378 Enoyl-CoA hydratase/isomerase HYI42_04055 PF00171 Aldehyde dehydrogenase family HYI42_04065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_04065 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_04065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_04070 PF03573 outer membrane porin, OprD family HYI42_04085 PF07519 Tannase and feruloyl esterase HYI42_04090 PF00392 Bacterial regulatory proteins, gntR family HYI42_04090 PF07729 FCD domain HYI42_04095 PF00171 Aldehyde dehydrogenase family HYI42_04100 PF00701 Dihydrodipicolinate synthetase family HYI42_04105 PF13378 Enolase C-terminal domain-like HYI42_04110 PF07690 Major Facilitator Superfamily HYI42_04115 PF08666 SAF domain HYI42_04115 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HYI42_04120 PF00892 EamA-like transporter family HYI42_04125 PF12833 Helix-turn-helix domain HYI42_04125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HYI42_04150 PF00324 Amino acid permease HYI42_04155 PF04958 Arginine N-succinyltransferase beta subunit HYI42_04160 PF00202 Aminotransferase class-III HYI42_04170 PF00171 Aldehyde dehydrogenase family HYI42_04180 PF07729 FCD domain HYI42_04180 PF00392 Bacterial regulatory proteins, gntR family HYI42_04190 PF00324 Amino acid permease HYI42_04195 PF01266 FAD dependent oxidoreductase HYI42_04200 PF00324 Amino acid permease HYI42_04235 PF05593 RHS Repeat HYI42_04235 PF03527 RHS protein HYI42_04240 PF16671 Actin cross-linking domain HYI42_04240 PF04717 Type VI secretion system, phage-baseplate injector HYI42_04255 PF03180 NLPA lipoprotein HYI42_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_04265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_04270 PF00764 Arginosuccinate synthase HYI42_04275 PF01590 GAF domain HYI42_04275 PF00563 EAL domain HYI42_04275 PF00990 Diguanylate cyclase, GGDEF domain HYI42_04275 PF00360 Phytochrome region HYI42_04280 PF01979 Amidohydrolase family HYI42_04285 PF00929 Exonuclease HYI42_04340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_04345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYI42_04345 PF00005 ABC transporter HYI42_04350 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_04350 PF12911 N-terminal TM domain of oligopeptide transport permease C HYI42_04355 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_04360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYI42_04365 PF01464 Transglycosylase SLT domain HYI42_04365 PF01464 Transglycosylase SLT domain HYI42_04365 PF01476 LysM domain HYI42_04365 PF01476 LysM domain HYI42_04370 PF00929 Exonuclease HYI42_04380 PF09297 NADH pyrophosphatase zinc ribbon domain HYI42_04380 PF00293 NUDIX domain HYI42_04390 PF04972 BON domain HYI42_04395 PF02021 Uncharacterised protein family UPF0102 HYI42_04400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYI42_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_04410 PF03466 LysR substrate binding domain HYI42_04415 PF01810 LysE type translocator HYI42_04425 PF13411 MerR HTH family regulatory protein HYI42_04435 PF01494 FAD binding domain HYI42_04440 PF01494 FAD binding domain HYI42_04445 PF05195 Aminopeptidase P, N-terminal domain HYI42_04445 PF00557 Metallopeptidase family M24 HYI42_04495 PF02190 ATP-dependent protease La (LON) substrate-binding domain HYI42_04495 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_04495 PF05362 Lon protease (S16) C-terminal proteolytic domain HYI42_04500 PF02590 Predicted SPOUT methyltransferase HYI42_04505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HYI42_04515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYI42_04515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYI42_04520 PF04060 Putative Fe-S cluster HYI42_04525 PF00730 HhH-GPD superfamily base excision DNA repair protein HYI42_04525 PF10576 Iron-sulfur binding domain of endonuclease III HYI42_04525 PF00633 Helix-hairpin-helix motif HYI42_04535 PF05191 Adenylate kinase, active site lid HYI42_04550 PF00905 Penicillin binding protein transpeptidase domain HYI42_04550 PF03717 Penicillin-binding Protein dimerisation domain HYI42_04565 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYI42_04570 PF01730 UreF HYI42_04575 PF02814 UreE urease accessory protein, N-terminal domain HYI42_04575 PF05194 UreE urease accessory protein, C-terminal domain HYI42_04580 PF00449 Urease alpha-subunit, N-terminal domain HYI42_04580 PF01979 Amidohydrolase family HYI42_04585 PF00699 Urease beta subunit HYI42_04590 PF00547 Urease, gamma subunit HYI42_04595 PF01774 UreD urease accessory protein HYI42_04610 PF00463 Isocitrate lyase family HYI42_04615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_04615 PF03466 LysR substrate binding domain HYI42_04620 PF01595 Cyclin M transmembrane N-terminal domain HYI42_04620 PF03471 Transporter associated domain HYI42_04620 PF00571 CBS domain HYI42_04625 PF03600 Citrate transporter HYI42_04640 PF00009 Elongation factor Tu GTP binding domain HYI42_04645 PF01507 Phosphoadenosine phosphosulfate reductase family HYI42_04655 PF14052 Capsule assembly protein Wzi HYI42_04660 PF01336 OB-fold nucleic acid binding domain HYI42_04660 PF00152 tRNA synthetases class II (D, K and N) HYI42_04675 PF00301 Rubredoxin HYI42_04680 PF18113 Rubredoxin binding C-terminal domain HYI42_04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_04685 PF00561 alpha/beta hydrolase fold HYI42_04690 PF03466 LysR substrate binding domain HYI42_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_04705 PF17941 Polyphosphate kinase C-terminal domain 1 HYI42_04705 PF13090 Polyphosphate kinase C-terminal domain 2 HYI42_04705 PF13089 Polyphosphate kinase N-terminal domain HYI42_04705 PF02503 Polyphosphate kinase middle domain HYI42_04710 PF00912 Transglycosylase HYI42_04715 PF01694 Rhomboid family HYI42_04725 PF00005 ABC transporter HYI42_04730 PF13472 GDSL-like Lipase/Acylhydrolase family HYI42_04735 PF00484 Carbonic anhydrase HYI42_04750 PF07715 TonB-dependent Receptor Plug Domain HYI42_04750 PF00593 TonB dependent receptor HYI42_04755 PF01106 NifU-like domain HYI42_04755 PF01521 Iron-sulphur cluster biosynthesis HYI42_04765 PF00884 Sulfatase HYI42_04770 PF03781 Sulfatase-modifying factor enzyme 1 HYI42_04785 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_04790 PF01384 Phosphate transporter family HYI42_04795 PF00809 Pterin binding enzyme HYI42_04795 PF02574 Homocysteine S-methyltransferase HYI42_04795 PF02310 B12 binding domain HYI42_04795 PF02607 B12 binding domain HYI42_04795 PF02965 Vitamin B12 dependent methionine synthase, activation domain HYI42_04800 PF02780 Transketolase, C-terminal domain HYI42_04800 PF02779 Transketolase, pyrimidine binding domain HYI42_04805 PF00456 Transketolase, thiamine diphosphate binding domain HYI42_04810 PF07690 Major Facilitator Superfamily HYI42_04820 PF03466 LysR substrate binding domain HYI42_04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_04830 PF01263 Aldose 1-epimerase HYI42_04835 PF07690 Major Facilitator Superfamily HYI42_04840 PF02311 AraC-like ligand binding domain HYI42_04840 PF12833 Helix-turn-helix domain HYI42_04845 PF04960 Glutaminase HYI42_04850 PF01327 Polypeptide deformylase HYI42_04855 PF07690 Major Facilitator Superfamily HYI42_04865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYI42_04865 PF00205 Thiamine pyrophosphate enzyme, central domain HYI42_04865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYI42_04870 PF00171 Aldehyde dehydrogenase family HYI42_04875 PF01958 Domain of unknown function DUF108 HYI42_04875 PF03447 Homoserine dehydrogenase, NAD binding domain HYI42_04885 PF12697 Alpha/beta hydrolase family HYI42_04895 PF07690 Major Facilitator Superfamily HYI42_04900 PF14759 Reductase C-terminal HYI42_04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_04905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYI42_04915 PF00355 Rieske [2Fe-2S] domain HYI42_04925 PF00355 Rieske [2Fe-2S] domain HYI42_04930 PF09339 IclR helix-turn-helix domain HYI42_04930 PF01614 Bacterial transcriptional regulator HYI42_04945 PF00378 Enoyl-CoA hydratase/isomerase HYI42_04955 PF00535 Glycosyl transferase family 2 HYI42_04960 PF14883 Hypothetical glycosyl hydrolase family 13 HYI42_04960 PF01522 Polysaccharide deacetylase HYI42_04965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYI42_04970 PF07152 YaeQ protein HYI42_04975 PF00375 Sodium:dicarboxylate symporter family HYI42_04980 PF07683 Cobalamin synthesis protein cobW C-terminal domain HYI42_04980 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYI42_04990 PF03061 Thioesterase superfamily HYI42_05000 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_05005 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_05010 PF13977 BetI-type transcriptional repressor, C-terminal HYI42_05010 PF00440 Bacterial regulatory proteins, tetR family HYI42_05015 PF00171 Aldehyde dehydrogenase family HYI42_05020 PF05199 GMC oxidoreductase HYI42_05020 PF00732 GMC oxidoreductase HYI42_05025 PF06039 Malate:quinone oxidoreductase (Mqo) HYI42_05035 PF02574 Homocysteine S-methyltransferase HYI42_05040 PF13520 Amino acid permease HYI42_05065 PF01126 Heme oxygenase HYI42_05085 PF07715 TonB-dependent Receptor Plug Domain HYI42_05085 PF00593 TonB dependent receptor HYI42_05095 PF04542 Sigma-70 region 2 HYI42_05095 PF08281 Sigma-70, region 4 HYI42_05105 PF00701 Dihydrodipicolinate synthetase family HYI42_05110 PF00083 Sugar (and other) transporter HYI42_05130 PF01026 TatD related DNase HYI42_05165 PF00436 Single-strand binding protein family HYI42_05220 PF00589 Phage integrase family HYI42_05220 PF13356 Arm DNA-binding domain HYI42_05235 PF07690 Major Facilitator Superfamily HYI42_05240 PF13533 Biotin-lipoyl like HYI42_05245 PF03061 Thioesterase superfamily HYI42_05250 PF00490 Delta-aminolevulinic acid dehydratase HYI42_05255 PF01266 FAD dependent oxidoreductase HYI42_05260 PF01370 NAD dependent epimerase/dehydratase family HYI42_05260 PF08338 Domain of unknown function (DUF1731) HYI42_05280 PF12320 Type 5 capsule protein repressor C-terminal domain HYI42_05280 PF00149 Calcineurin-like phosphoesterase HYI42_05290 PF01168 Alanine racemase, N-terminal domain HYI42_05295 PF00437 Type II/IV secretion system protein HYI42_05300 PF00437 Type II/IV secretion system protein HYI42_05305 PF01475 Ferric uptake regulator family HYI42_05310 PF04355 SmpA / OmlA family HYI42_05315 PF03658 RnfH family Ubiquitin HYI42_05325 PF01814 Hemerythrin HHE cation binding domain HYI42_05340 PF00696 Amino acid kinase family HYI42_05345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYI42_05345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYI42_05345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYI42_05345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYI42_05350 PF00692 dUTPase HYI42_05355 PF00580 UvrD/REP helicase N-terminal domain HYI42_05355 PF13361 UvrD-like helicase C-terminal domain HYI42_05360 PF00691 OmpA family HYI42_05360 PF13488 Glycine zipper HYI42_05365 PF01553 Acyltransferase HYI42_05375 PF03775 Septum formation inhibitor MinC, C-terminal domain HYI42_05380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYI42_05385 PF03776 Septum formation topological specificity factor MinE HYI42_05395 PF01810 LysE type translocator HYI42_05400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HYI42_05400 PF01580 FtsK/SpoIIIE family HYI42_05400 PF09397 Ftsk gamma domain HYI42_05400 PF17854 FtsK alpha domain HYI42_05405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_05410 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HYI42_05415 PF04376 Arginine-tRNA-protein transferase, N terminus HYI42_05415 PF04377 Arginine-tRNA-protein transferase, C terminus HYI42_05420 PF00583 Acetyltransferase (GNAT) family HYI42_05440 PF00009 Elongation factor Tu GTP binding domain HYI42_05440 PF03144 Elongation factor Tu domain 2 HYI42_05440 PF03143 Elongation factor Tu C-terminal domain HYI42_05445 PF03144 Elongation factor Tu domain 2 HYI42_05445 PF00009 Elongation factor Tu GTP binding domain HYI42_05445 PF03764 Elongation factor G, domain IV HYI42_05445 PF00679 Elongation factor G C-terminus HYI42_05445 PF14492 Elongation Factor G, domain II HYI42_05450 PF00177 Ribosomal protein S7p/S5e HYI42_05455 PF00164 Ribosomal protein S12/S23 HYI42_05465 PF00109 Beta-ketoacyl synthase, N-terminal domain HYI42_05465 PF02801 Beta-ketoacyl synthase, C-terminal domain HYI42_05475 PF02678 Pirin HYI42_05475 PF05726 Pirin C-terminal cupin domain HYI42_05485 PF02540 NAD synthase HYI42_05485 PF00795 Carbon-nitrogen hydrolase HYI42_05500 PF00175 Oxidoreductase NAD-binding domain HYI42_05500 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_05500 PF00970 Oxidoreductase FAD-binding domain HYI42_05505 PF00171 Aldehyde dehydrogenase family HYI42_05510 PF00355 Rieske [2Fe-2S] domain HYI42_05510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HYI42_05515 PF07859 alpha/beta hydrolase fold HYI42_05520 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_05525 PF00180 Isocitrate/isopropylmalate dehydrogenase HYI42_05530 PF03466 LysR substrate binding domain HYI42_05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_05550 PF00037 4Fe-4S binding domain HYI42_05555 PF01467 Cytidylyltransferase-like HYI42_05560 PF01668 SmpB protein HYI42_05565 PF03358 NADPH-dependent FMN reductase HYI42_05575 PF00849 RNA pseudouridylate synthase HYI42_05575 PF01479 S4 domain HYI42_05580 PF13525 Outer membrane lipoprotein HYI42_05585 PF10410 DnaB-helicase binding domain of primase HYI42_05585 PF08278 DNA primase DnaG DnaB-binding HYI42_05585 PF08275 DNA primase catalytic core, N-terminal domain HYI42_05585 PF01807 CHC2 zinc finger HYI42_05590 PF01488 Shikimate / quinate 5-dehydrogenase HYI42_05590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HYI42_05590 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HYI42_05600 PF03550 Outer membrane lipoprotein LolB HYI42_05605 PF00288 GHMP kinases N terminal domain HYI42_05605 PF08544 GHMP kinases C terminal HYI42_05630 PF14572 Phosphoribosyl synthetase-associated domain HYI42_05630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYI42_05635 PF01386 Ribosomal L25p family HYI42_05640 PF01195 Peptidyl-tRNA hydrolase HYI42_05645 PF02261 Aspartate decarboxylase HYI42_05660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HYI42_05670 PF08543 Phosphomethylpyrimidine kinase HYI42_05670 PF03070 TENA/THI-4/PQQC family HYI42_05670 PF02581 Thiamine monophosphate synthase HYI42_05675 PF04972 BON domain HYI42_05675 PF01476 LysM domain HYI42_05680 PF00550 Phosphopantetheine attachment site HYI42_05690 PF00698 Acyl transferase domain HYI42_05695 PF01783 Ribosomal L32p protein family HYI42_05700 PF02620 Large ribosomal RNA subunit accumulation protein YceD HYI42_05705 PF04315 Elongation factor P hydroxylase HYI42_05710 PF01300 Telomere recombination HYI42_05715 PF02616 Segregation and condensation protein ScpA HYI42_05720 PF04079 Segregation and condensation complex subunit ScpB HYI42_05725 PF01479 S4 domain HYI42_05725 PF00849 RNA pseudouridylate synthase HYI42_05740 PF00155 Aminotransferase class I and II HYI42_05745 PF04055 Radical SAM superfamily HYI42_05745 PF06968 Biotin and Thiamin Synthesis associated domain HYI42_05745 PF00202 Aminotransferase class-III HYI42_05750 PF08241 Methyltransferase domain HYI42_05750 PF12697 Alpha/beta hydrolase family HYI42_05760 PF00982 Glycosyltransferase family 20 HYI42_05765 PF07690 Major Facilitator Superfamily HYI42_05770 PF00210 Ferritin-like domain HYI42_05775 PF03120 NAD-dependent DNA ligase OB-fold domain HYI42_05775 PF12826 Helix-hairpin-helix motif HYI42_05775 PF00533 BRCA1 C Terminus (BRCT) domain HYI42_05775 PF01653 NAD-dependent DNA ligase adenylation domain HYI42_05775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HYI42_05785 PF02463 RecF/RecN/SMC N terminal domain HYI42_05785 PF06470 SMC proteins Flexible Hinge Domain HYI42_05795 PF01925 Sulfite exporter TauE/SafE HYI42_05805 PF03309 Type III pantothenate kinase HYI42_05810 PF00448 SRP54-type protein, GTPase domain HYI42_05810 PF02881 SRP54-type protein, helical bundle domain HYI42_05810 PF02978 Signal peptide binding domain HYI42_05820 PF01207 Dihydrouridine synthase (Dus) HYI42_05850 PF00692 dUTPase HYI42_05865 PF01048 Phosphorylase superfamily HYI42_05870 PF10609 NUBPL iron-transfer P-loop NTPase HYI42_05880 PF01588 Putative tRNA binding domain HYI42_05880 PF09334 tRNA synthetases class I (M) HYI42_05905 PF13533 Biotin-lipoyl like HYI42_05910 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_05925 PF05552 Conserved TM helix HYI42_05940 PF00970 Oxidoreductase FAD-binding domain HYI42_05940 PF00175 Oxidoreductase NAD-binding domain HYI42_05945 PF03466 LysR substrate binding domain HYI42_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_05955 PF00313 'Cold-shock' DNA-binding domain HYI42_05965 PF00361 Proton-conducting membrane transporter HYI42_05970 PF00361 Proton-conducting membrane transporter HYI42_05975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYI42_05975 PF00361 Proton-conducting membrane transporter HYI42_05980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYI42_05985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HYI42_05990 PF12838 4Fe-4S dicluster domain HYI42_05995 PF00146 NADH dehydrogenase HYI42_06000 PF00384 Molybdopterin oxidoreductase HYI42_06000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYI42_06000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYI42_06005 PF10531 SLBB domain HYI42_06005 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYI42_06005 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYI42_06015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HYI42_06015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HYI42_06020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYI42_06025 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HYI42_06030 PF17151 Periplasmic sensor domain HYI42_06030 PF00990 Diguanylate cyclase, GGDEF domain HYI42_06040 PF00672 HAMP domain HYI42_06040 PF00512 His Kinase A (phospho-acceptor) domain HYI42_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_06045 PF00486 Transcriptional regulatory protein, C terminal HYI42_06045 PF00072 Response regulator receiver domain HYI42_06055 PF03477 ATP cone domain HYI42_06055 PF02867 Ribonucleotide reductase, barrel domain HYI42_06055 PF00317 Ribonucleotide reductase, all-alpha domain HYI42_06065 PF00268 Ribonucleotide reductase, small chain HYI42_06075 PF02567 Phenazine biosynthesis-like protein HYI42_06095 PF16295 Tetracyclin repressor-like, C-terminal domain HYI42_06095 PF00440 Bacterial regulatory proteins, tetR family HYI42_06100 PF01613 Flavin reductase like domain HYI42_06105 PF08267 Cobalamin-independent synthase, N-terminal domain HYI42_06105 PF01717 Cobalamin-independent synthase, Catalytic domain HYI42_06120 PF01810 LysE type translocator HYI42_06130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HYI42_06130 PF12833 Helix-turn-helix domain HYI42_06135 PF07687 Peptidase dimerisation domain HYI42_06135 PF01546 Peptidase family M20/M25/M40 HYI42_06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_06145 PF03466 LysR substrate binding domain HYI42_06150 PF07690 Major Facilitator Superfamily HYI42_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_06160 PF03466 LysR substrate binding domain HYI42_06165 PF00890 FAD binding domain HYI42_06165 PF14537 Cytochrome c3 HYI42_06175 PF02515 CoA-transferase family III HYI42_06180 PF07690 Major Facilitator Superfamily HYI42_06185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_06185 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_06185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_06190 PF03466 LysR substrate binding domain HYI42_06195 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_06195 PF00107 Zinc-binding dehydrogenase HYI42_06200 PF00962 Adenosine/AMP deaminase HYI42_06225 PF02445 Quinolinate synthetase A protein HYI42_06230 PF01960 ArgJ family HYI42_06235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HYI42_06235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HYI42_06240 PF00893 Small Multidrug Resistance protein HYI42_06250 PF05275 Copper resistance protein B precursor (CopB) HYI42_06255 PF07732 Multicopper oxidase HYI42_06255 PF07731 Multicopper oxidase HYI42_06255 PF00394 Multicopper oxidase HYI42_06270 PF00834 Ribulose-phosphate 3 epimerase family HYI42_06280 PF00756 Putative esterase HYI42_06290 PF04445 Putative SAM-dependent methyltransferase HYI42_06295 PF00814 Glycoprotease family HYI42_06300 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_06305 PF00293 NUDIX domain HYI42_06350 PF00155 Aminotransferase class I and II HYI42_06355 PF00815 Histidinol dehydrogenase HYI42_06360 PF01634 ATP phosphoribosyltransferase HYI42_06365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYI42_06370 PF01722 BolA-like protein HYI42_06375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HYI42_06380 PF00309 Sigma-54 factor, Activator interacting domain (AID) HYI42_06380 PF04963 Sigma-54 factor, core binding domain HYI42_06380 PF04552 Sigma-54, DNA binding domain HYI42_06425 PF00795 Carbon-nitrogen hydrolase HYI42_06435 PF01047 MarR family HYI42_06440 PF02566 OsmC-like protein HYI42_06445 PF00437 Type II/IV secretion system protein HYI42_06465 PF01612 3'-5' exonuclease HYI42_06465 PF01367 5'-3' exonuclease, C-terminal SAM fold HYI42_06465 PF00476 DNA polymerase family A HYI42_06465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYI42_06470 PF02325 YGGT family HYI42_06475 PF03807 NADP oxidoreductase coenzyme F420-dependent HYI42_06475 PF14748 Pyrroline-5-carboxylate reductase dimerisation HYI42_06480 PF01171 PP-loop family HYI42_06480 PF11734 TilS substrate C-terminal domain HYI42_06480 PF09179 TilS substrate binding domain HYI42_06485 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HYI42_06490 PF02541 Ppx/GppA phosphatase family HYI42_06495 PF00085 Thioredoxin HYI42_06500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYI42_06500 PF07498 Rho termination factor, N-terminal domain HYI42_06500 PF07497 Rho termination factor, RNA-binding domain HYI42_06515 PF00216 Bacterial DNA-binding protein HYI42_06520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HYI42_06520 PF03483 B3/4 domain HYI42_06520 PF03484 tRNA synthetase B5 domain HYI42_06520 PF03147 Ferredoxin-fold anticodon binding domain HYI42_06520 PF01588 Putative tRNA binding domain HYI42_06525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HYI42_06525 PF01409 tRNA synthetases class II core domain (F) HYI42_06540 PF00453 Ribosomal protein L20 HYI42_06545 PF01632 Ribosomal protein L35 HYI42_06550 PF07690 Major Facilitator Superfamily HYI42_06560 PF00043 Glutathione S-transferase, C-terminal domain HYI42_06560 PF02798 Glutathione S-transferase, N-terminal domain HYI42_06565 PF00707 Translation initiation factor IF-3, C-terminal domain HYI42_06565 PF05198 Translation initiation factor IF-3, N-terminal domain HYI42_06570 PF03129 Anticodon binding domain HYI42_06570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYI42_06570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYI42_06570 PF02824 TGS domain HYI42_06575 PF13193 AMP-binding enzyme C-terminal domain HYI42_06575 PF00501 AMP-binding enzyme HYI42_06580 PF04751 Protein of unknown function (DUF615) HYI42_06585 PF00381 PTS HPr component phosphorylation site HYI42_06590 PF03668 P-loop ATPase protein family HYI42_06595 PF02569 Pantoate-beta-alanine ligase HYI42_06600 PF02548 Ketopantoate hydroxymethyltransferase HYI42_06605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HYI42_06610 PF12626 Polymerase A arginine-rich C-terminus HYI42_06610 PF12627 Probable RNA and SrmB- binding site of polymerase A HYI42_06610 PF01743 Poly A polymerase head domain HYI42_06620 PF03819 MazG nucleotide pyrophosphohydrolase domain HYI42_06630 PF02824 TGS domain HYI42_06630 PF04607 Region found in RelA / SpoT proteins HYI42_06630 PF13291 ACT domain HYI42_06635 PF05958 tRNA (Uracil-5-)-methyltransferase HYI42_06645 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_06650 PF01627 Hpt domain HYI42_06650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HYI42_06650 PF00512 His Kinase A (phospho-acceptor) domain HYI42_06650 PF00672 HAMP domain HYI42_06650 PF00072 Response regulator receiver domain HYI42_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_06655 PF00378 Enoyl-CoA hydratase/isomerase HYI42_06660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HYI42_06660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYI42_06665 PF01261 Xylose isomerase-like TIM barrel HYI42_06675 PF00106 short chain dehydrogenase HYI42_06680 PF02233 NAD(P) transhydrogenase beta subunit HYI42_06685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HYI42_06690 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HYI42_06690 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HYI42_06695 PF00892 EamA-like transporter family HYI42_06705 PF07690 Major Facilitator Superfamily HYI42_06725 PF07732 Multicopper oxidase HYI42_06725 PF00394 Multicopper oxidase HYI42_06725 PF07731 Multicopper oxidase HYI42_06735 PF00072 Response regulator receiver domain HYI42_06735 PF00486 Transcriptional regulatory protein, C terminal HYI42_06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_06740 PF00672 HAMP domain HYI42_06740 PF00512 His Kinase A (phospho-acceptor) domain HYI42_06745 PF04945 YHS domain HYI42_06825 PF00589 Phage integrase family HYI42_06830 PF01207 Dihydrouridine synthase (Dus) HYI42_06850 PF00899 ThiF family HYI42_06855 PF00694 Aconitase C-terminal domain HYI42_06855 PF00330 Aconitase family (aconitate hydratase) HYI42_06860 PF01026 TatD related DNase HYI42_06875 PF03144 Elongation factor Tu domain 2 HYI42_06875 PF00009 Elongation factor Tu GTP binding domain HYI42_06875 PF16658 Class II release factor RF3, C-terminal domain HYI42_06895 PF03707 Bacterial signalling protein N terminal repeat HYI42_06895 PF00563 EAL domain HYI42_06895 PF00990 Diguanylate cyclase, GGDEF domain HYI42_06900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HYI42_06900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HYI42_06905 PF10369 Small subunit of acetolactate synthase HYI42_06910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYI42_06910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYI42_06910 PF00205 Thiamine pyrophosphate enzyme, central domain HYI42_06920 PF00133 tRNA synthetases class I (I, L, M and V) HYI42_06920 PF09334 tRNA synthetases class I (M) HYI42_06920 PF13603 Leucyl-tRNA synthetase, Domain 2 HYI42_06920 PF08264 Anticodon-binding domain of tRNA HYI42_06935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_06940 PF02687 FtsX-like permease family HYI42_06940 PF00005 ABC transporter HYI42_06940 PF12704 MacB-like periplasmic core domain HYI42_06945 PF02321 Outer membrane efflux protein HYI42_06960 PF00929 Exonuclease HYI42_06965 PF03193 RsgA GTPase HYI42_06975 PF00462 Glutaredoxin HYI42_06980 PF02556 Preprotein translocase subunit SecB HYI42_06990 PF01926 50S ribosome-binding GTPase HYI42_06990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HYI42_06995 PF13360 PQQ-like domain HYI42_07005 PF13393 Histidyl-tRNA synthetase HYI42_07005 PF03129 Anticodon binding domain HYI42_07010 PF04551 GcpE protein HYI42_07015 PF13464 Domain of unknown function (DUF4115) HYI42_07025 PF04055 Radical SAM superfamily HYI42_07030 PF00334 Nucleoside diphosphate kinase HYI42_07035 PF04384 Iron-sulphur cluster assembly HYI42_07040 PF01569 PAP2 superfamily HYI42_07045 PF13439 Glycosyltransferase Family 4 HYI42_07045 PF00534 Glycosyl transferases group 1 HYI42_07050 PF11818 C-terminal domain of tail specific protease (DUF3340) HYI42_07050 PF00595 PDZ domain HYI42_07050 PF03572 Peptidase family S41 HYI42_07050 PF17804 Tail specific protease N-terminal domain HYI42_07055 PF00933 Glycosyl hydrolase family 3 N terminal domain HYI42_07065 PF00561 alpha/beta hydrolase fold HYI42_07070 PF00171 Aldehyde dehydrogenase family HYI42_07075 PF00171 Aldehyde dehydrogenase family HYI42_07080 PF01202 Shikimate kinase HYI42_07085 PF02447 GntP family permease HYI42_07090 PF01081 KDPG and KHG aldolase HYI42_07095 PF00920 Dehydratase family HYI42_07100 PF00871 Acetokinase family HYI42_07105 PF01515 Phosphate acetyl/butaryl transferase HYI42_07105 PF07085 DRTGG domain HYI42_07110 PF05683 Fumarase C-terminus HYI42_07110 PF05681 Fumarate hydratase (Fumerase) HYI42_07125 PF06689 ClpX C4-type zinc finger HYI42_07125 PF10431 C-terminal, D2-small domain, of ClpB protein HYI42_07125 PF07724 AAA domain (Cdc48 subfamily) HYI42_07130 PF00574 Clp protease HYI42_07135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYI42_07135 PF05698 Bacterial trigger factor protein (TF) C-terminus HYI42_07135 PF05697 Bacterial trigger factor protein (TF) HYI42_07140 PF07715 TonB-dependent Receptor Plug Domain HYI42_07140 PF00593 TonB dependent receptor HYI42_07145 PF13640 2OG-Fe(II) oxygenase superfamily HYI42_07145 PF18331 PKHD-type hydroxylase C-terminal domain HYI42_07150 PF08502 LeuA allosteric (dimerisation) domain HYI42_07150 PF00682 HMGL-like HYI42_07155 PF00561 alpha/beta hydrolase fold HYI42_07160 PF07021 Methionine biosynthesis protein MetW HYI42_07160 PF00561 alpha/beta hydrolase fold HYI42_07170 PF01725 Ham1 family HYI42_07180 PF02416 mttA/Hcf106 family HYI42_07185 PF02416 mttA/Hcf106 family HYI42_07190 PF00902 Sec-independent protein translocase protein (TatC) HYI42_07205 PF00665 Integrase core domain HYI42_07235 PF00582 Universal stress protein family HYI42_07240 PF00916 Sulfate permease family HYI42_07240 PF01740 STAS domain HYI42_07265 PF00905 Penicillin binding protein transpeptidase domain HYI42_07290 PF01790 Prolipoprotein diacylglyceryl transferase HYI42_07305 PF00303 Thymidylate synthase HYI42_07310 PF00186 Dihydrofolate reductase HYI42_07320 PF01625 Peptide methionine sulfoxide reductase HYI42_07330 PF01618 MotA/TolQ/ExbB proton channel family HYI42_07340 PF01842 ACT domain HYI42_07340 PF00551 Formyl transferase HYI42_07350 PF00171 Aldehyde dehydrogenase family HYI42_07355 PF00830 Ribosomal L28 family HYI42_07360 PF00471 Ribosomal protein L33 HYI42_07365 PF00999 Sodium/hydrogen exchanger family HYI42_07365 PF02254 TrkA-N domain HYI42_07385 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HYI42_07390 PF00580 UvrD/REP helicase N-terminal domain HYI42_07390 PF13361 UvrD-like helicase C-terminal domain HYI42_07405 PF08272 Topoisomerase I zinc-ribbon-like HYI42_07405 PF01751 Toprim domain HYI42_07405 PF01131 DNA topoisomerase HYI42_07405 PF01396 Topoisomerase DNA binding C4 zinc finger HYI42_07415 PF01638 HxlR-like helix-turn-helix HYI42_07420 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_07420 PF00107 Zinc-binding dehydrogenase HYI42_07425 PF04102 SlyX HYI42_07445 PF01810 LysE type translocator HYI42_07450 PF03279 Bacterial lipid A biosynthesis acyltransferase HYI42_07460 PF00375 Sodium:dicarboxylate symporter family HYI42_07470 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYI42_07470 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYI42_07490 PF01416 tRNA pseudouridine synthase HYI42_07500 PF01176 Translation initiation factor 1A / IF-1 HYI42_07515 PF00180 Isocitrate/isopropylmalate dehydrogenase HYI42_07525 PF00694 Aconitase C-terminal domain HYI42_07530 PF00330 Aconitase family (aconitate hydratase) HYI42_07540 PF03466 LysR substrate binding domain HYI42_07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_07550 PF00293 NUDIX domain HYI42_07555 PF00391 PEP-utilising enzyme, mobile domain HYI42_07555 PF05524 PEP-utilising enzyme, N-terminal HYI42_07555 PF01590 GAF domain HYI42_07555 PF02896 PEP-utilising enzyme, TIM barrel domain HYI42_07560 PF00141 Peroxidase HYI42_07565 PF12706 Beta-lactamase superfamily domain HYI42_07580 PF02798 Glutathione S-transferase, N-terminal domain HYI42_07585 PF08279 HTH domain HYI42_07585 PF13280 WYL domain HYI42_07590 PF13419 Haloacid dehalogenase-like hydrolase HYI42_07595 PF01479 S4 domain HYI42_07595 PF00849 RNA pseudouridylate synthase HYI42_07605 PF12111 Polyribonucleotide phosphorylase C terminal HYI42_07605 PF00575 S1 RNA binding domain HYI42_07605 PF10150 Ribonuclease E/G family HYI42_07610 PF13193 AMP-binding enzyme C-terminal domain HYI42_07610 PF00501 AMP-binding enzyme HYI42_07625 PF03466 LysR substrate binding domain HYI42_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_07630 PF00106 short chain dehydrogenase HYI42_07635 PF06969 HemN C-terminal domain HYI42_07635 PF04055 Radical SAM superfamily HYI42_07645 PF01554 MatE HYI42_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_07650 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_07650 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HYI42_07655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_07655 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HYI42_07660 PF03109 ABC1 family HYI42_07665 PF01197 Ribosomal protein L31 HYI42_07675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HYI42_07695 PF03884 DNA gyrase inhibitor YacG HYI42_07700 PF00753 Metallo-beta-lactamase superfamily HYI42_07705 PF00762 Ferrochelatase HYI42_07715 PF01177 Asp/Glu/Hydantoin racemase HYI42_07735 PF01206 Sulfurtransferase TusA HYI42_07740 PF00571 CBS domain HYI42_07740 PF03471 Transporter associated domain HYI42_07745 PF00795 Carbon-nitrogen hydrolase HYI42_07750 PF01588 Putative tRNA binding domain HYI42_07760 PF08334 Type II secretion system (T2SS), protein G HYI42_07760 PF07963 Prokaryotic N-terminal methylation motif HYI42_07765 PF00482 Type II secretion system (T2SS), protein F HYI42_07770 PF17764 3′ DNA-binding domain (3′BD) HYI42_07770 PF00271 Helicase conserved C-terminal domain HYI42_07770 PF00270 DEAD/DEAH box helicase HYI42_07770 PF18074 Primosomal protein N C-terminal domain HYI42_07770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HYI42_07775 PF02254 TrkA-N domain HYI42_07775 PF00999 Sodium/hydrogen exchanger family HYI42_07780 PF01430 Hsp33 protein HYI42_07790 PF01556 DnaJ C terminal domain HYI42_07790 PF00226 DnaJ domain HYI42_07800 PF01544 CorA-like Mg2+ transporter protein HYI42_07805 PF00013 KH domain HYI42_07805 PF00575 S1 RNA binding domain HYI42_07805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HYI42_07805 PF01138 3' exoribonuclease family, domain 1 HYI42_07805 PF03725 3' exoribonuclease family, domain 2 HYI42_07810 PF00312 Ribosomal protein S15 HYI42_07820 PF13538 UvrD-like helicase C-terminal domain HYI42_07825 PF12705 PD-(D/E)XK nuclease superfamily HYI42_07825 PF00580 UvrD/REP helicase N-terminal domain HYI42_07825 PF13361 UvrD-like helicase C-terminal domain HYI42_07830 PF17946 RecC C-terminal domain HYI42_07850 PF01209 ubiE/COQ5 methyltransferase family HYI42_07860 PF03109 ABC1 family HYI42_07865 PF01494 FAD binding domain HYI42_07870 PF01502 Phosphoribosyl-AMP cyclohydrolase HYI42_07890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYI42_07895 PF00361 Proton-conducting membrane transporter HYI42_07905 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HYI42_07915 PF02033 Ribosome-binding factor A HYI42_07920 PF11987 Translation-initiation factor 2 HYI42_07920 PF00009 Elongation factor Tu GTP binding domain HYI42_07920 PF08364 Bacterial translation initiation factor IF-2 associated region HYI42_07920 PF04760 Translation initiation factor IF-2, N-terminal region HYI42_07925 PF13184 NusA-like KH domain HYI42_07925 PF08529 NusA N-terminal domain HYI42_07925 PF00575 S1 RNA binding domain HYI42_07930 PF02576 RimP N-terminal domain HYI42_07930 PF17384 RimP C-terminal SH3 domain HYI42_07950 PF03840 Preprotein translocase SecG subunit HYI42_07955 PF00121 Triosephosphate isomerase HYI42_07960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HYI42_07960 PF00437 Type II/IV secretion system protein HYI42_07965 PF00482 Type II secretion system (T2SS), protein F HYI42_07970 PF01478 Type IV leader peptidase family HYI42_07970 PF06750 Bacterial Peptidase A24 N-terminal domain HYI42_07975 PF01121 Dephospho-CoA kinase HYI42_07985 PF00588 SpoU rRNA Methylase family HYI42_07985 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYI42_07990 PF06865 Pyrimidine/purine nucleoside phosphorylase HYI42_08000 PF02463 RecF/RecN/SMC N terminal domain HYI42_08005 PF02622 Uncharacterized ACR, COG1678 HYI42_08010 PF03652 Holliday junction resolvase HYI42_08015 PF13533 Biotin-lipoyl like HYI42_08040 PF02805 Metal binding domain of Ada HYI42_08040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HYI42_08040 PF12833 Helix-turn-helix domain HYI42_08040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HYI42_08045 PF01066 CDP-alcohol phosphatidyltransferase HYI42_08055 PF02151 UvrB/uvrC motif HYI42_08055 PF01541 GIY-YIG catalytic domain HYI42_08055 PF08459 UvrC Helix-hairpin-helix N-terminal HYI42_08075 PF00378 Enoyl-CoA hydratase/isomerase HYI42_08075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYI42_08075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYI42_08080 PF02803 Thiolase, C-terminal domain HYI42_08080 PF00108 Thiolase, N-terminal domain HYI42_08095 PF09278 MerR, DNA binding HYI42_08095 PF00376 MerR family regulatory protein HYI42_08105 PF01323 DSBA-like thioredoxin domain HYI42_08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_08120 PF00183 Hsp90 protein HYI42_08135 PF13726 Na+-H+ antiporter family HYI42_08135 PF03553 Na+/H+ antiporter family HYI42_08160 PF00623 RNA polymerase Rpb1, domain 2 HYI42_08160 PF04983 RNA polymerase Rpb1, domain 3 HYI42_08160 PF04997 RNA polymerase Rpb1, domain 1 HYI42_08160 PF04998 RNA polymerase Rpb1, domain 5 HYI42_08160 PF05000 RNA polymerase Rpb1, domain 4 HYI42_08165 PF04563 RNA polymerase beta subunit HYI42_08165 PF04560 RNA polymerase Rpb2, domain 7 HYI42_08165 PF00562 RNA polymerase Rpb2, domain 6 HYI42_08165 PF10385 RNA polymerase beta subunit external 1 domain HYI42_08165 PF04565 RNA polymerase Rpb2, domain 3 HYI42_08165 PF04561 RNA polymerase Rpb2, domain 2 HYI42_08170 PF00542 Ribosomal protein L7/L12 C-terminal domain HYI42_08170 PF16320 Ribosomal protein L7/L12 dimerisation domain HYI42_08175 PF00466 Ribosomal protein L10 HYI42_08180 PF00687 Ribosomal protein L1p/L10e family HYI42_08185 PF00298 Ribosomal protein L11, RNA binding domain HYI42_08185 PF03946 Ribosomal protein L11, N-terminal domain HYI42_08190 PF02357 Transcription termination factor nusG HYI42_08190 PF00467 KOW motif HYI42_08195 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HYI42_08205 PF00009 Elongation factor Tu GTP binding domain HYI42_08205 PF03144 Elongation factor Tu domain 2 HYI42_08205 PF03143 Elongation factor Tu C-terminal domain HYI42_08230 PF04715 Anthranilate synthase component I, N terminal region HYI42_08230 PF00425 chorismate binding enzyme HYI42_08235 PF13419 Haloacid dehalogenase-like hydrolase HYI42_08240 PF12401 Protein of unknown function (DUF2662) HYI42_08240 PF00498 FHA domain HYI42_08245 PF00263 Bacterial type II and III secretion system protein HYI42_08245 PF03958 Bacterial type II/III secretion system short domain HYI42_08260 PF00816 H-NS histone family HYI42_08285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HYI42_08285 PF03900 Porphobilinogen deaminase, C-terminal domain HYI42_08290 PF04397 LytTr DNA-binding domain HYI42_08290 PF00072 Response regulator receiver domain HYI42_08295 PF06580 Histidine kinase HYI42_08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_08295 PF07694 5TMR of 5TMR-LYT HYI42_08300 PF00206 Lyase HYI42_08300 PF14698 Argininosuccinate lyase C-terminal HYI42_08305 PF04362 Bacterial Fe(2+) trafficking HYI42_08310 PF01895 PhoU domain HYI42_08315 PF02321 Outer membrane efflux protein HYI42_08320 PF00892 EamA-like transporter family HYI42_08335 PF13667 ThiC-associated domain HYI42_08335 PF01964 Radical SAM ThiC family HYI42_08340 PF00293 NUDIX domain HYI42_08345 PF00149 Calcineurin-like phosphoesterase HYI42_08350 PF01258 Prokaryotic dksA/traR C4-type zinc finger HYI42_08355 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYI42_08360 PF01098 Cell cycle protein HYI42_08365 PF02875 Mur ligase family, glutamate ligase domain HYI42_08365 PF08245 Mur ligase middle domain HYI42_08375 PF07664 Ferrous iron transport protein B C terminus HYI42_08375 PF07670 Nucleoside recognition HYI42_08375 PF02421 Ferrous iron transport protein B HYI42_08385 PF00589 Phage integrase family HYI42_08385 PF02899 Phage integrase, N-terminal SAM-like domain HYI42_08390 PF13098 Thioredoxin-like domain HYI42_08390 PF10411 Disulfide bond isomerase protein N-terminus HYI42_08395 PF01842 ACT domain HYI42_08395 PF00742 Homoserine dehydrogenase HYI42_08395 PF03447 Homoserine dehydrogenase, NAD binding domain HYI42_08400 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_08405 PF00768 D-alanyl-D-alanine carboxypeptidase HYI42_08410 PF00072 Response regulator receiver domain HYI42_08410 PF00196 Bacterial regulatory proteins, luxR family HYI42_08425 PF00595 PDZ domain HYI42_08425 PF03572 Peptidase family S41 HYI42_08430 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HYI42_08430 PF01676 Metalloenzyme superfamily HYI42_08435 PF03739 Lipopolysaccharide export system permease LptF/LptG HYI42_08445 PF02789 Cytosol aminopeptidase family, N-terminal domain HYI42_08445 PF00883 Cytosol aminopeptidase family, catalytic domain HYI42_08465 PF00677 Lumazine binding domain HYI42_08475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYI42_08475 PF01872 RibD C-terminal domain HYI42_08480 PF03477 ATP cone domain HYI42_08485 PF00909 Ammonium Transporter Family HYI42_08490 PF00543 Nitrogen regulatory protein P-II HYI42_08500 PF13335 Magnesium chelatase, subunit ChlI C-terminal HYI42_08500 PF01078 Magnesium chelatase, subunit ChlI HYI42_08515 PF00916 Sulfate permease family HYI42_08515 PF01740 STAS domain HYI42_08530 PF01252 Signal peptidase (SPase) II HYI42_08540 PF13411 MerR HTH family regulatory protein HYI42_08545 PF03743 Bacterial conjugation TrbI-like protein HYI42_08560 PF02796 Helix-turn-helix domain of resolvase HYI42_08560 PF00239 Resolvase, N terminal domain HYI42_08585 PF00893 Small Multidrug Resistance protein HYI42_08590 PF01909 Nucleotidyltransferase domain HYI42_08590 PF13427 Domain of unknown function (DUF4111) HYI42_08600 PF00583 Acetyltransferase (GNAT) family HYI42_08605 PF00589 Phage integrase family HYI42_08605 PF13495 Phage integrase, N-terminal SAM-like domain HYI42_08610 PF11809 Domain of unknown function (DUF3330) HYI42_08610 PF00563 EAL domain HYI42_08615 PF13610 DDE domain HYI42_08620 PF01636 Phosphotransferase enzyme family HYI42_08635 PF13610 DDE domain HYI42_08640 PF02796 Helix-turn-helix domain of resolvase HYI42_08640 PF00239 Resolvase, N terminal domain HYI42_08650 PF13610 DDE domain HYI42_08660 PF02796 Helix-turn-helix domain of resolvase HYI42_08660 PF00239 Resolvase, N terminal domain HYI42_08665 PF01526 Tn3 transposase DDE domain HYI42_08665 PF13700 Domain of unknown function (DUF4158) HYI42_08675 PF00302 Chloramphenicol acetyltransferase HYI42_08695 PF00892 EamA-like transporter family HYI42_08700 PF07690 Major Facilitator Superfamily HYI42_08705 PF02909 Tetracyclin repressor-like, C-terminal domain HYI42_08705 PF00440 Bacterial regulatory proteins, tetR family HYI42_08715 PF09278 MerR, DNA binding HYI42_08715 PF00376 MerR family regulatory protein HYI42_08720 PF02411 MerT mercuric transport protein HYI42_08725 PF00403 Heavy-metal-associated domain HYI42_08730 PF03203 MerC mercury resistance protein HYI42_08735 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_08735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYI42_08735 PF00403 Heavy-metal-associated domain HYI42_08740 PF13411 MerR HTH family regulatory protein HYI42_08745 PF05052 MerE protein HYI42_08750 PF00563 EAL domain HYI42_08750 PF11809 Domain of unknown function (DUF3330) HYI42_08760 PF13610 DDE domain HYI42_08775 PF00809 Pterin binding enzyme HYI42_08800 PF01131 DNA topoisomerase HYI42_08800 PF01751 Toprim domain HYI42_08800 PF01396 Topoisomerase DNA binding C4 zinc finger HYI42_08815 PF01252 Signal peptidase (SPase) II HYI42_08820 PF01252 Signal peptidase (SPase) II HYI42_08830 PF13411 MerR HTH family regulatory protein HYI42_08840 PF03960 ArsC family HYI42_08845 PF01022 Bacterial regulatory protein, arsR family HYI42_08855 PF01758 Sodium Bile acid symporter family HYI42_08860 PF03358 NADPH-dependent FMN reductase HYI42_08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_08900 PF01078 Magnesium chelatase, subunit ChlI HYI42_08900 PF13335 Magnesium chelatase, subunit ChlI C-terminal HYI42_08905 PF00155 Aminotransferase class I and II HYI42_08905 PF00392 Bacterial regulatory proteins, gntR family HYI42_08915 PF00701 Dihydrodipicolinate synthetase family HYI42_08925 PF03573 outer membrane porin, OprD family HYI42_08930 PF00719 Inorganic pyrophosphatase HYI42_08945 PF00501 AMP-binding enzyme HYI42_08945 PF13193 AMP-binding enzyme C-terminal domain HYI42_08950 PF00521 DNA gyrase/topoisomerase IV, subunit A HYI42_08950 PF03989 DNA gyrase C-terminal domain, beta-propeller HYI42_08955 PF07690 Major Facilitator Superfamily HYI42_08960 PF03458 UPF0126 domain HYI42_08965 PF02810 SEC-C motif HYI42_08970 PF03471 Transporter associated domain HYI42_08970 PF03741 Integral membrane protein TerC family HYI42_08975 PF03641 Possible lysine decarboxylase HYI42_08980 PF07690 Major Facilitator Superfamily HYI42_08990 PF11798 IMS family HHH motif HYI42_08990 PF11799 impB/mucB/samB family C-terminal domain HYI42_08990 PF00817 impB/mucB/samB family HYI42_09005 PF04055 Radical SAM superfamily HYI42_09005 PF11842 Domain of unknown function (DUF3362) HYI42_09005 PF08497 Radical SAM N-terminal HYI42_09025 PF03358 NADPH-dependent FMN reductase HYI42_09035 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_09095 PF01327 Polypeptide deformylase HYI42_09105 PF17782 DprA winged helix domain HYI42_09105 PF02481 DNA recombination-mediator protein A HYI42_09110 PF01300 Telomere recombination HYI42_09115 PF00892 EamA-like transporter family HYI42_09120 PF00440 Bacterial regulatory proteins, tetR family HYI42_09125 PF07690 Major Facilitator Superfamily HYI42_09135 PF00255 Glutathione peroxidase HYI42_09145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HYI42_09150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYI42_09150 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYI42_09155 PF00231 ATP synthase HYI42_09160 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYI42_09160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYI42_09160 PF00306 ATP synthase alpha/beta chain, C terminal domain HYI42_09165 PF00213 ATP synthase delta (OSCP) subunit HYI42_09170 PF00430 ATP synthase B/B' CF(0) HYI42_09175 PF00137 ATP synthase subunit C HYI42_09180 PF00119 ATP synthase A chain HYI42_09200 PF00005 ABC transporter HYI42_09205 PF00950 ABC 3 transport family HYI42_09210 PF01810 LysE type translocator HYI42_09215 PF04261 Dyp-type peroxidase family HYI42_09220 PF03949 Malic enzyme, NAD binding domain HYI42_09220 PF00390 Malic enzyme, N-terminal domain HYI42_09225 PF05746 DALR anticodon binding domain HYI42_09225 PF00750 tRNA synthetases class I (R) HYI42_09225 PF03485 Arginyl tRNA synthetase N terminal domain HYI42_09245 PF02678 Pirin HYI42_09245 PF05726 Pirin C-terminal cupin domain HYI42_09255 PF03551 Transcriptional regulator PadR-like family HYI42_09260 PF13427 Domain of unknown function (DUF4111) HYI42_09260 PF01909 Nucleotidyltransferase domain HYI42_09265 PF00958 GMP synthase C terminal domain HYI42_09265 PF00117 Glutamine amidotransferase class-I HYI42_09265 PF02540 NAD synthase HYI42_09270 PF04286 Protein of unknown function (DUF445) HYI42_09275 PF07681 DoxX HYI42_09280 PF09335 SNARE associated Golgi protein HYI42_09295 PF13614 AAA domain HYI42_09305 PF01722 BolA-like protein HYI42_09320 PF01648 4'-phosphopantetheinyl transferase superfamily HYI42_09325 PF12697 Alpha/beta hydrolase family HYI42_09340 PF00668 Condensation domain HYI42_09340 PF00975 Thioesterase domain HYI42_09340 PF00550 Phosphopantetheine attachment site HYI42_09340 PF13193 AMP-binding enzyme C-terminal domain HYI42_09340 PF00501 AMP-binding enzyme HYI42_09345 PF16197 Ketoacyl-synthetase C-terminal extension HYI42_09345 PF00109 Beta-ketoacyl synthase, N-terminal domain HYI42_09345 PF14765 Polyketide synthase dehydratase HYI42_09345 PF02801 Beta-ketoacyl synthase, C-terminal domain HYI42_09345 PF00550 Phosphopantetheine attachment site HYI42_09345 PF08659 KR domain HYI42_09350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_09350 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_09350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_09355 PF00501 AMP-binding enzyme HYI42_09360 PF03472 Autoinducer binding domain HYI42_09360 PF00196 Bacterial regulatory proteins, luxR family HYI42_09370 PF00765 Autoinducer synthase HYI42_09380 PF00378 Enoyl-CoA hydratase/isomerase HYI42_09385 PF00378 Enoyl-CoA hydratase/isomerase HYI42_09390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_09390 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_09390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_09395 PF00501 AMP-binding enzyme HYI42_09395 PF13193 AMP-binding enzyme C-terminal domain HYI42_09400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HYI42_09400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYI42_09405 PF00171 Aldehyde dehydrogenase family HYI42_09415 PF00324 Amino acid permease HYI42_09420 PF00324 Amino acid permease HYI42_09425 PF01042 Endoribonuclease L-PSP HYI42_09430 PF00842 Alanine racemase, C-terminal domain HYI42_09430 PF01168 Alanine racemase, N-terminal domain HYI42_09435 PF01266 FAD dependent oxidoreductase HYI42_09440 PF01037 Lrp/AsnC ligand binding domain HYI42_09450 PF07715 TonB-dependent Receptor Plug Domain HYI42_09450 PF00593 TonB dependent receptor HYI42_09465 PF00849 RNA pseudouridylate synthase HYI42_09480 PF00872 Transposase, Mutator family HYI42_09490 PF13737 Transposase DDE domain HYI42_09505 PF00330 Aconitase family (aconitate hydratase) HYI42_09505 PF00694 Aconitase C-terminal domain HYI42_09510 PF00285 Citrate synthase, C-terminal domain HYI42_09520 PF07729 FCD domain HYI42_09520 PF00392 Bacterial regulatory proteins, gntR family HYI42_09530 PF00155 Aminotransferase class I and II HYI42_09535 PF01565 FAD binding domain HYI42_09535 PF09330 D-lactate dehydrogenase, membrane binding HYI42_09540 PF01070 FMN-dependent dehydrogenase HYI42_09545 PF07729 FCD domain HYI42_09545 PF00392 Bacterial regulatory proteins, gntR family HYI42_09550 PF02652 L-lactate permease HYI42_09555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYI42_09555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYI42_09555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYI42_09555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYI42_09565 PF00342 Phosphoglucose isomerase HYI42_09570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYI42_09570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYI42_09570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYI42_09575 PF00483 Nucleotidyl transferase HYI42_09585 PF02719 Polysaccharide biosynthesis protein HYI42_09590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYI42_09595 PF17836 PglD N-terminal domain HYI42_09595 PF14602 Hexapeptide repeat of succinyl-transferase HYI42_09595 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_09600 PF02397 Bacterial sugar transferase HYI42_09630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYI42_09635 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_09640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYI42_09640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYI42_09645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYI42_09645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYI42_09645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYI42_09650 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HYI42_09650 PF10531 SLBB domain HYI42_09650 PF02563 Polysaccharide biosynthesis/export protein HYI42_09655 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYI42_09660 PF02706 Chain length determinant protein HYI42_09660 PF13807 G-rich domain on putative tyrosine kinase HYI42_09660 PF13614 AAA domain HYI42_09665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYI42_09665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HYI42_09675 PF03023 Lipid II flippase MurJ HYI42_09680 PF01510 N-acetylmuramoyl-L-alanine amidase HYI42_09685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HYI42_09685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HYI42_09695 PF04185 Phosphoesterase family HYI42_09695 PF05506 Domain of unknown function (DUF756) HYI42_09705 PF03725 3' exoribonuclease family, domain 2 HYI42_09705 PF01138 3' exoribonuclease family, domain 1 HYI42_09710 PF00487 Fatty acid desaturase HYI42_09715 PF00175 Oxidoreductase NAD-binding domain HYI42_09720 PF00440 Bacterial regulatory proteins, tetR family HYI42_09725 PF08360 QacR-like protein, C-terminal region HYI42_09725 PF00440 Bacterial regulatory proteins, tetR family HYI42_09730 PF01323 DSBA-like thioredoxin domain HYI42_09740 PF13419 Haloacid dehalogenase-like hydrolase HYI42_09745 PF00106 short chain dehydrogenase HYI42_09760 PF00696 Amino acid kinase family HYI42_09760 PF00583 Acetyltransferase (GNAT) family HYI42_09765 PF09084 NMT1/THI5 like HYI42_09770 PF09084 NMT1/THI5 like HYI42_09775 PF00296 Luciferase-like monooxygenase HYI42_09780 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_09785 PF00005 ABC transporter HYI42_09790 PF08362 YcdC-like protein, C-terminal region HYI42_09790 PF00440 Bacterial regulatory proteins, tetR family HYI42_09795 PF01048 Phosphorylase superfamily HYI42_09805 PF06574 FAD synthetase HYI42_09805 PF01687 Riboflavin kinase HYI42_09810 PF08264 Anticodon-binding domain of tRNA HYI42_09810 PF06827 Zinc finger found in FPG and IleRS HYI42_09810 PF00133 tRNA synthetases class I (I, L, M and V) HYI42_09815 PF01252 Signal peptidase (SPase) II HYI42_09820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYI42_09860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HYI42_09865 PF07859 alpha/beta hydrolase fold HYI42_09890 PF01025 GrpE HYI42_09895 PF00012 Hsp70 protein HYI42_09920 PF13406 Transglycosylase SLT domain HYI42_09925 PF02222 ATP-grasp domain HYI42_09925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HYI42_09930 PF00731 AIR carboxylase HYI42_09940 PF02875 Mur ligase family, glutamate ligase domain HYI42_09940 PF08245 Mur ligase middle domain HYI42_09940 PF01225 Mur ligase family, catalytic domain HYI42_09950 PF01569 PAP2 superfamily HYI42_09955 PF03741 Integral membrane protein TerC family HYI42_09965 PF03738 Glutathionylspermidine synthase preATP-grasp HYI42_09970 PF00355 Rieske [2Fe-2S] domain HYI42_09975 PF01979 Amidohydrolase family HYI42_09980 PF00156 Phosphoribosyl transferase domain HYI42_09995 PF01545 Cation efflux family HYI42_09995 PF16916 Dimerisation domain of Zinc Transporter HYI42_10000 PF02583 Metal-sensitive transcriptional repressor HYI42_10005 PF10396 GTP-binding protein TrmE N-terminus HYI42_10005 PF01926 50S ribosome-binding GTPase HYI42_10005 PF12631 MnmE helical domain HYI42_10010 PF14849 YidC periplasmic domain HYI42_10010 PF02096 60Kd inner membrane protein HYI42_10015 PF01809 Putative membrane protein insertion efficiency factor HYI42_10020 PF00825 Ribonuclease P HYI42_10025 PF00468 Ribosomal protein L34 HYI42_10030 PF00308 Bacterial dnaA protein HYI42_10030 PF11638 DnaA N-terminal domain HYI42_10030 PF08299 Bacterial dnaA protein helix-turn-helix HYI42_10035 PF02767 DNA polymerase III beta subunit, central domain HYI42_10035 PF02768 DNA polymerase III beta subunit, C-terminal domain HYI42_10035 PF00712 DNA polymerase III beta subunit, N-terminal domain HYI42_10040 PF02463 RecF/RecN/SMC N terminal domain HYI42_10045 PF00986 DNA gyrase B subunit, carboxyl terminus HYI42_10045 PF18053 DNA gyrase B subunit insert domain HYI42_10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_10045 PF01751 Toprim domain HYI42_10045 PF00204 DNA gyrase B HYI42_10055 PF09335 SNARE associated Golgi protein HYI42_10060 PF12848 ABC transporter HYI42_10060 PF00005 ABC transporter HYI42_10080 PF00144 Beta-lactamase HYI42_10100 PF01521 Iron-sulphur cluster biosynthesis HYI42_10105 PF00561 alpha/beta hydrolase fold HYI42_10110 PF03702 Anhydro-N-acetylmuramic acid kinase HYI42_10115 PF00579 tRNA synthetases class I (W and Y) HYI42_10160 PF00209 Sodium:neurotransmitter symporter family HYI42_10170 PF01029 NusB family HYI42_10170 PF01189 16S rRNA methyltransferase RsmB/F HYI42_10175 PF00551 Formyl transferase HYI42_10175 PF02911 Formyl transferase, C-terminal domain HYI42_10180 PF00920 Dehydratase family HYI42_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_10195 PF03466 LysR substrate binding domain HYI42_10200 PF00860 Permease family HYI42_10205 PF00311 Phosphoenolpyruvate carboxylase HYI42_10210 PF08361 MAATS-type transcriptional repressor, C-terminal region HYI42_10210 PF00440 Bacterial regulatory proteins, tetR family HYI42_10215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_10220 PF00873 AcrB/AcrD/AcrF family HYI42_10230 PF00684 DnaJ central domain HYI42_10230 PF01556 DnaJ C terminal domain HYI42_10230 PF00226 DnaJ domain HYI42_10240 PF05173 Dihydrodipicolinate reductase, C-terminus HYI42_10240 PF01113 Dihydrodipicolinate reductase, N-terminus HYI42_10250 PF07690 Major Facilitator Superfamily HYI42_10255 PF00248 Aldo/keto reductase family HYI42_10260 PF03466 LysR substrate binding domain HYI42_10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_10275 PF00155 Aminotransferase class I and II HYI42_10275 PF00392 Bacterial regulatory proteins, gntR family HYI42_10280 PF00107 Zinc-binding dehydrogenase HYI42_10280 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_10285 PF03352 Methyladenine glycosylase HYI42_10300 PF10576 Iron-sulfur binding domain of endonuclease III HYI42_10300 PF00633 Helix-hairpin-helix motif HYI42_10300 PF00730 HhH-GPD superfamily base excision DNA repair protein HYI42_10300 PF14815 NUDIX domain HYI42_10315 PF07043 Protein of unknown function (DUF1328) HYI42_10320 PF03692 Putative zinc- or iron-chelating domain HYI42_10325 PF07995 Glucose / Sorbosone dehydrogenase HYI42_10330 PF12002 MgsA AAA+ ATPase C terminal HYI42_10330 PF16193 AAA C-terminal domain HYI42_10330 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_10335 PF01226 Formate/nitrite transporter HYI42_10345 PF01259 SAICAR synthetase HYI42_10355 PF00701 Dihydrodipicolinate synthetase family HYI42_10360 PF00857 Isochorismatase family HYI42_10365 PF01758 Sodium Bile acid symporter family HYI42_10370 PF01554 MatE HYI42_10375 PF04463 Protein of unknown function (DUF523) HYI42_10380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYI42_10390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYI42_10405 PF00324 Amino acid permease HYI42_10415 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYI42_10415 PF07683 Cobalamin synthesis protein cobW C-terminal domain HYI42_10425 PF07702 UTRA domain HYI42_10425 PF00392 Bacterial regulatory proteins, gntR family HYI42_10430 PF05962 HutD HYI42_10435 PF01175 Urocanase Rossmann-like domain HYI42_10435 PF17392 Urocanase C-terminal domain HYI42_10435 PF17391 Urocanase N-terminal domain HYI42_10440 PF00221 Aromatic amino acid lyase HYI42_10445 PF00324 Amino acid permease HYI42_10450 PF01979 Amidohydrolase family HYI42_10455 PF00491 Arginase family HYI42_10470 PF01177 Asp/Glu/Hydantoin racemase HYI42_10480 PF00145 C-5 cytosine-specific DNA methylase HYI42_10500 PF01380 SIS domain HYI42_10505 PF12804 MobA-like NTP transferase domain HYI42_10505 PF14602 Hexapeptide repeat of succinyl-transferase HYI42_10505 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_10510 PF04608 Phosphatidylglycerophosphatase A HYI42_10515 PF00586 AIR synthase related protein, N-terminal domain HYI42_10515 PF02769 AIR synthase related protein, C-terminal domain HYI42_10520 PF01029 NusB family HYI42_10525 PF00885 6,7-dimethyl-8-ribityllumazine synthase HYI42_10530 PF00925 GTP cyclohydrolase II HYI42_10530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HYI42_10555 PF02580 D-Tyr-tRNA(Tyr) deacylase HYI42_10560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HYI42_10560 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HYI42_10565 PF00581 Rhodanese-like domain HYI42_10570 PF02666 Phosphatidylserine decarboxylase HYI42_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_10580 PF00512 His Kinase A (phospho-acceptor) domain HYI42_10580 PF00989 PAS fold HYI42_10580 PF11808 Phosphate regulon sensor protein PhoR HYI42_10585 PF00072 Response regulator receiver domain HYI42_10585 PF00486 Transcriptional regulatory protein, C terminal HYI42_10595 PF00106 short chain dehydrogenase HYI42_10600 PF01554 MatE HYI42_10605 PF00155 Aminotransferase class I and II HYI42_10610 PF04286 Protein of unknown function (DUF445) HYI42_10625 PF04262 Glutamate-cysteine ligase HYI42_10630 PF02600 Disulfide bond formation protein DsbB HYI42_10665 PF05728 Uncharacterised protein family (UPF0227) HYI42_10670 PF00986 DNA gyrase B subunit, carboxyl terminus HYI42_10670 PF01751 Toprim domain HYI42_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_10670 PF00204 DNA gyrase B HYI42_10675 PF04115 Ureidoglycolate lyase HYI42_10680 PF03561 Allantoicase repeat HYI42_10685 PF01494 FAD binding domain HYI42_10695 PF00860 Permease family HYI42_10700 PF00576 HIUase/Transthyretin family HYI42_10730 PF02683 Cytochrome C biogenesis protein transmembrane region HYI42_10730 PF11412 Disulphide bond corrector protein DsbC HYI42_10735 PF00990 Diguanylate cyclase, GGDEF domain HYI42_10735 PF07694 5TMR of 5TMR-LYT HYI42_10740 PF07859 alpha/beta hydrolase fold HYI42_10750 PF03960 ArsC family HYI42_10755 PF03372 Endonuclease/Exonuclease/phosphatase family HYI42_10760 PF00156 Phosphoribosyl transferase domain HYI42_10765 PF00593 TonB dependent receptor HYI42_10765 PF07715 TonB-dependent Receptor Plug Domain HYI42_10775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HYI42_10775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HYI42_10780 PF03033 Glycosyltransferase family 28 N-terminal domain HYI42_10780 PF04101 Glycosyltransferase family 28 C-terminal domain HYI42_10785 PF02875 Mur ligase family, glutamate ligase domain HYI42_10785 PF08245 Mur ligase middle domain HYI42_10785 PF01225 Mur ligase family, catalytic domain HYI42_10790 PF07478 D-ala D-ala ligase C-terminus HYI42_10790 PF01820 D-ala D-ala ligase N-terminus HYI42_10795 PF08478 POTRA domain, FtsQ-type HYI42_10795 PF03799 Cell division protein FtsQ HYI42_10800 PF02491 SHS2 domain inserted in FTSA HYI42_10805 PF12327 FtsZ family, C-terminal domain HYI42_10805 PF00091 Tubulin/FtsZ family, GTPase domain HYI42_10810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HYI42_10820 PF01551 Peptidase family M23 HYI42_10825 PF17831 Pyruvate dehydrogenase E1 component middle domain HYI42_10825 PF00456 Transketolase, thiamine diphosphate binding domain HYI42_10830 PF02817 e3 binding domain HYI42_10830 PF00364 Biotin-requiring enzyme HYI42_10830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HYI42_10840 PF01169 Uncharacterized protein family UPF0016 HYI42_10845 PF07715 TonB-dependent Receptor Plug Domain HYI42_10845 PF00593 TonB dependent receptor HYI42_10850 PF00258 Flavodoxin HYI42_10850 PF01613 Flavin reductase like domain HYI42_10855 PF03692 Putative zinc- or iron-chelating domain HYI42_10860 PF00571 CBS domain HYI42_10860 PF00478 IMP dehydrogenase / GMP reductase domain HYI42_10865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYI42_10865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYI42_10865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYI42_10865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYI42_10870 PF01243 Pyridoxamine 5'-phosphate oxidase HYI42_10870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HYI42_10875 PF17768 RecJ OB domain HYI42_10875 PF01368 DHH family HYI42_10875 PF02272 DHHA1 domain HYI42_10895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_10900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HYI42_10905 PF04452 RNA methyltransferase HYI42_10910 PF00924 Mechanosensitive ion channel HYI42_10920 PF16177 Acetyl-coenzyme A synthetase N-terminus HYI42_10920 PF00501 AMP-binding enzyme HYI42_10920 PF13193 AMP-binding enzyme C-terminal domain HYI42_10925 PF00857 Isochorismatase family HYI42_10930 PF01037 Lrp/AsnC ligand binding domain HYI42_10935 PF00296 Luciferase-like monooxygenase HYI42_10940 PF03358 NADPH-dependent FMN reductase HYI42_10945 PF00072 Response regulator receiver domain HYI42_10945 PF00196 Bacterial regulatory proteins, luxR family HYI42_10955 PF00672 HAMP domain HYI42_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_10955 PF00512 His Kinase A (phospho-acceptor) domain HYI42_10955 PF01627 Hpt domain HYI42_10955 PF00072 Response regulator receiver domain HYI42_10960 PF04341 Protein of unknown function, DUF485 HYI42_10965 PF00474 Sodium:solute symporter family HYI42_10975 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_10990 PF17760 UvrA interaction domain HYI42_10990 PF17755 UvrA DNA-binding domain HYI42_10990 PF00005 ABC transporter HYI42_10995 PF16925 Tetracyclin repressor-like, C-terminal domain HYI42_10995 PF00440 Bacterial regulatory proteins, tetR family HYI42_11000 PF00107 Zinc-binding dehydrogenase HYI42_11000 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_11010 PF06942 GlpM protein HYI42_11015 PF03070 TENA/THI-4/PQQC family HYI42_11015 PF08543 Phosphomethylpyrimidine kinase HYI42_11015 PF02581 Thiamine monophosphate synthase HYI42_11025 PF07690 Major Facilitator Superfamily HYI42_11030 PF00436 Single-strand binding protein family HYI42_11040 PF03591 AzlC protein HYI42_11050 PF00324 Amino acid permease HYI42_11055 PF00155 Aminotransferase class I and II HYI42_11055 PF00392 Bacterial regulatory proteins, gntR family HYI42_11060 PF00202 Aminotransferase class-III HYI42_11065 PF00171 Aldehyde dehydrogenase family HYI42_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_11075 PF00857 Isochorismatase family HYI42_11080 PF05726 Pirin C-terminal cupin domain HYI42_11080 PF02678 Pirin HYI42_11085 PF01593 Flavin containing amine oxidoreductase HYI42_11105 PF07690 Major Facilitator Superfamily HYI42_11110 PF03466 LysR substrate binding domain HYI42_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_11130 PF00248 Aldo/keto reductase family HYI42_11135 PF02311 AraC-like ligand binding domain HYI42_11135 PF12833 Helix-turn-helix domain HYI42_11150 PF01638 HxlR-like helix-turn-helix HYI42_11165 PF01638 HxlR-like helix-turn-helix HYI42_11170 PF02525 Flavodoxin-like fold HYI42_11180 PF13302 Acetyltransferase (GNAT) domain HYI42_11190 PF02705 K+ potassium transporter HYI42_11220 PF00230 Major intrinsic protein HYI42_11235 PF00977 Histidine biosynthesis protein HYI42_11240 PF01636 Phosphotransferase enzyme family HYI42_11265 PF00977 Histidine biosynthesis protein HYI42_11280 PF00117 Glutamine amidotransferase class-I HYI42_11285 PF00475 Imidazoleglycerol-phosphate dehydratase HYI42_11305 PF00583 Acetyltransferase (GNAT) family HYI42_11310 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HYI42_11310 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HYI42_11320 PF00672 HAMP domain HYI42_11320 PF00512 His Kinase A (phospho-acceptor) domain HYI42_11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_11325 PF00486 Transcriptional regulatory protein, C terminal HYI42_11325 PF00072 Response regulator receiver domain HYI42_11330 PF16921 Tex protein YqgF-like domain HYI42_11330 PF09371 Tex-like protein N-terminal domain HYI42_11330 PF00575 S1 RNA binding domain HYI42_11330 PF17674 HHH domain HYI42_11335 PF00916 Sulfate permease family HYI42_11335 PF01740 STAS domain HYI42_11340 PF00106 short chain dehydrogenase HYI42_11345 PF01053 Cys/Met metabolism PLP-dependent enzyme HYI42_11350 PF12848 ABC transporter HYI42_11350 PF00005 ABC transporter HYI42_11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_11375 PF00529 HlyD membrane-fusion protein of T1SS HYI42_11380 PF00873 AcrB/AcrD/AcrF family HYI42_11385 PF01545 Cation efflux family HYI42_11415 PF00324 Amino acid permease HYI42_11430 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYI42_11445 PF01795 MraW methylase family HYI42_11455 PF03717 Penicillin-binding Protein dimerisation domain HYI42_11455 PF00905 Penicillin binding protein transpeptidase domain HYI42_11460 PF01225 Mur ligase family, catalytic domain HYI42_11460 PF02875 Mur ligase family, glutamate ligase domain HYI42_11460 PF08245 Mur ligase middle domain HYI42_11465 PF02875 Mur ligase family, glutamate ligase domain HYI42_11465 PF01225 Mur ligase family, catalytic domain HYI42_11465 PF08245 Mur ligase middle domain HYI42_11470 PF00953 Glycosyl transferase family 4 HYI42_11480 PF13847 Methyltransferase domain HYI42_11485 PF17092 Penicillin-binding protein OB-like domain HYI42_11485 PF00912 Transglycosylase HYI42_11485 PF00905 Penicillin binding protein transpeptidase domain HYI42_11510 PF03958 Bacterial type II/III secretion system short domain HYI42_11510 PF00263 Bacterial type II and III secretion system protein HYI42_11510 PF11741 AMIN domain HYI42_11510 PF07660 Secretin and TonB N terminus short domain HYI42_11515 PF01202 Shikimate kinase HYI42_11520 PF01761 3-dehydroquinate synthase HYI42_11530 PF00310 Glutamine amidotransferases class-II HYI42_11530 PF04898 Glutamate synthase central domain HYI42_11530 PF01493 GXGXG motif HYI42_11530 PF01645 Conserved region in glutamate synthase HYI42_11535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYI42_11535 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_11545 PF04011 LemA family HYI42_11550 PF04536 TPM domain HYI42_11560 PF07963 Prokaryotic N-terminal methylation motif HYI42_11560 PF00114 Pilin (bacterial filament) HYI42_11565 PF11846 Virulence factor membrane-bound polymerase, C-terminal HYI42_11565 PF15864 Protein glycosylation ligase HYI42_11565 PF04932 O-Antigen ligase HYI42_11570 PF00210 Ferritin-like domain HYI42_11575 PF04324 BFD-like [2Fe-2S] binding domain HYI42_11580 PF01042 Endoribonuclease L-PSP HYI42_11585 PF04607 Region found in RelA / SpoT proteins HYI42_11585 PF02824 TGS domain HYI42_11585 PF13291 ACT domain HYI42_11590 PF01192 RNA polymerase Rpb6 HYI42_11595 PF00625 Guanylate kinase HYI42_11600 PF02401 LytB protein HYI42_11640 PF00886 Ribosomal protein S16 HYI42_11645 PF05239 PRC-barrel domain HYI42_11645 PF01782 RimM N-terminal domain HYI42_11650 PF01746 tRNA (Guanine-1)-methyltransferase HYI42_11655 PF01245 Ribosomal protein L19 HYI42_11660 PF00561 alpha/beta hydrolase fold HYI42_11665 PF03280 Proteobacterial lipase chaperone protein HYI42_11670 PF01509 TruB family pseudouridylate synthase (N terminal domain) HYI42_11670 PF09157 Pseudouridine synthase II TruB, C-terminal HYI42_11670 PF16198 tRNA pseudouridylate synthase B C-terminal domain HYI42_11675 PF01925 Sulfite exporter TauE/SafE HYI42_11685 PF00892 EamA-like transporter family HYI42_11690 PF00892 EamA-like transporter family HYI42_11695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYI42_11695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYI42_11700 PF01565 FAD binding domain HYI42_11700 PF02913 FAD linked oxidases, C-terminal domain HYI42_11710 PF03992 Antibiotic biosynthesis monooxygenase HYI42_11715 PF02525 Flavodoxin-like fold HYI42_11725 PF07690 Major Facilitator Superfamily HYI42_11730 PF12805 FUSC-like inner membrane protein yccS HYI42_11735 PF00080 Copper/zinc superoxide dismutase (SODC) HYI42_11740 PF01594 AI-2E family transporter HYI42_11745 PF13614 AAA domain HYI42_11765 PF08241 Methyltransferase domain HYI42_11775 PF00324 Amino acid permease HYI42_11780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYI42_11780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYI42_11785 PF00202 Aminotransferase class-III HYI42_11790 PF04958 Arginine N-succinyltransferase beta subunit HYI42_11795 PF00171 Aldehyde dehydrogenase family HYI42_11800 PF04996 Succinylarginine dihydrolase HYI42_11805 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HYI42_11820 PF00082 Subtilase family HYI42_11820 PF05922 Peptidase inhibitor I9 HYI42_11835 PF03466 LysR substrate binding domain HYI42_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_11840 PF00892 EamA-like transporter family HYI42_11855 PF02092 Glycyl-tRNA synthetase beta subunit HYI42_11855 PF05746 DALR anticodon binding domain HYI42_11860 PF02091 Glycyl-tRNA synthetase alpha subunit HYI42_11865 PF07690 Major Facilitator Superfamily HYI42_11880 PF00571 CBS domain HYI42_11885 PF04024 PspC domain HYI42_11895 PF12806 Acetyl-CoA dehydrogenase C-terminal like HYI42_11895 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_11895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_11895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_11905 PF01488 Shikimate / quinate 5-dehydrogenase HYI42_11905 PF08501 Shikimate dehydrogenase substrate binding domain HYI42_11905 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HYI42_11910 PF01218 Coproporphyrinogen III oxidase HYI42_11915 PF00925 GTP cyclohydrolase II HYI42_11920 PF02779 Transketolase, pyrimidine binding domain HYI42_11920 PF02780 Transketolase, C-terminal domain HYI42_11920 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HYI42_11925 PF00459 Inositol monophosphatase family HYI42_11930 PF00271 Helicase conserved C-terminal domain HYI42_11930 PF00270 DEAD/DEAH box helicase HYI42_11930 PF03880 DbpA RNA binding domain HYI42_11930 PF12343 Cold shock protein DEAD box A HYI42_11940 PF00005 ABC transporter HYI42_11945 PF02405 Permease MlaE HYI42_11955 PF05494 MlaC protein HYI42_11965 PF01544 CorA-like Mg2+ transporter protein HYI42_11970 PF03641 Possible lysine decarboxylase HYI42_11975 PF00293 NUDIX domain HYI42_11980 PF00156 Phosphoribosyl transferase domain HYI42_11985 PF17191 RecG wedge domain HYI42_11985 PF00271 Helicase conserved C-terminal domain HYI42_11985 PF00270 DEAD/DEAH box helicase HYI42_12000 PF01553 Acyltransferase HYI42_12010 PF00375 Sodium:dicarboxylate symporter family HYI42_12020 PF01926 50S ribosome-binding GTPase HYI42_12025 PF02082 Transcriptional regulator HYI42_12030 PF00970 Oxidoreductase FAD-binding domain HYI42_12030 PF00175 Oxidoreductase NAD-binding domain HYI42_12030 PF00042 Globin HYI42_12035 PF05872 Bacterial protein of unknown function (DUF853) HYI42_12040 PF01053 Cys/Met metabolism PLP-dependent enzyme HYI42_12045 PF00117 Glutamine amidotransferase class-I HYI42_12050 PF00338 Ribosomal protein S10p/S20e HYI42_12055 PF00297 Ribosomal protein L3 HYI42_12060 PF00573 Ribosomal protein L4/L1 family HYI42_12065 PF00276 Ribosomal protein L23 HYI42_12070 PF03947 Ribosomal Proteins L2, C-terminal domain HYI42_12070 PF00181 Ribosomal Proteins L2, RNA binding domain HYI42_12075 PF00203 Ribosomal protein S19 HYI42_12080 PF00237 Ribosomal protein L22p/L17e HYI42_12085 PF00189 Ribosomal protein S3, C-terminal domain HYI42_12085 PF07650 KH domain HYI42_12090 PF00252 Ribosomal protein L16p/L10e HYI42_12095 PF00831 Ribosomal L29 protein HYI42_12100 PF00366 Ribosomal protein S17 HYI42_12105 PF00238 Ribosomal protein L14p/L23e HYI42_12110 PF00467 KOW motif HYI42_12110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HYI42_12115 PF00673 ribosomal L5P family C-terminus HYI42_12115 PF00281 Ribosomal protein L5 HYI42_12120 PF00253 Ribosomal protein S14p/S29e HYI42_12125 PF00410 Ribosomal protein S8 HYI42_12130 PF00347 Ribosomal protein L6 HYI42_12135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HYI42_12140 PF00333 Ribosomal protein S5, N-terminal domain HYI42_12140 PF03719 Ribosomal protein S5, C-terminal domain HYI42_12145 PF00327 Ribosomal protein L30p/L7e HYI42_12150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HYI42_12155 PF00344 SecY translocase HYI42_12160 PF00444 Ribosomal protein L36 HYI42_12165 PF00416 Ribosomal protein S13/S18 HYI42_12170 PF00411 Ribosomal protein S11 HYI42_12175 PF01479 S4 domain HYI42_12175 PF00163 Ribosomal protein S4/S9 N-terminal domain HYI42_12180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HYI42_12180 PF01000 RNA polymerase Rpb3/RpoA insert domain HYI42_12180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HYI42_12185 PF01196 Ribosomal protein L17 HYI42_12190 PF00743 Flavin-binding monooxygenase-like HYI42_12195 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_12195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_12195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_12200 PF03937 Flavinator of succinate dehydrogenase HYI42_12230 PF09526 Probable metal-binding protein (DUF2387) HYI42_12235 PF01432 Peptidase family M3 HYI42_12240 PF08206 Ribonuclease B OB domain HYI42_12240 PF17876 Cold shock domain HYI42_12240 PF00575 S1 RNA binding domain HYI42_12240 PF00773 RNB domain HYI42_12240 PF08461 Ribonuclease R winged-helix domain HYI42_12285 PF01557 Fumarylacetoacetate (FAA) hydrolase family HYI42_12290 PF12833 Helix-turn-helix domain HYI42_12300 PF03631 Virulence factor BrkB HYI42_12305 PF03358 NADPH-dependent FMN reductase HYI42_12330 PF02130 Uncharacterized protein family UPF0054 HYI42_12335 PF02562 PhoH-like protein HYI42_12340 PF04055 Radical SAM superfamily HYI42_12340 PF01938 TRAM domain HYI42_12340 PF00919 Uncharacterized protein family UPF0004 HYI42_12345 PF01464 Transglycosylase SLT domain HYI42_12345 PF10145 Phage-related minor tail protein HYI42_12345 PF01551 Peptidase family M23 HYI42_12355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HYI42_12355 PF00056 lactate/malate dehydrogenase, NAD binding domain HYI42_12375 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HYI42_12380 PF01066 CDP-alcohol phosphatidyltransferase HYI42_12425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_12425 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_12425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_12430 PF17932 Tetracyclin repressor-like, C-terminal domain HYI42_12430 PF00440 Bacterial regulatory proteins, tetR family HYI42_12445 PF01039 Carboxyl transferase domain HYI42_12450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_12450 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_12450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_12460 PF00364 Biotin-requiring enzyme HYI42_12460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_12460 PF02785 Biotin carboxylase C-terminal domain HYI42_12460 PF00289 Biotin carboxylase, N-terminal domain HYI42_12470 PF04386 Stringent starvation protein B HYI42_12475 PF00043 Glutathione S-transferase, C-terminal domain HYI42_12475 PF13417 Glutathione S-transferase, N-terminal domain HYI42_12480 PF00380 Ribosomal protein S9/S16 HYI42_12485 PF00572 Ribosomal protein L13 HYI42_12490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HYI42_12495 PF00398 Ribosomal RNA adenine dimethylase HYI42_12500 PF00149 Calcineurin-like phosphoesterase HYI42_12520 PF01926 50S ribosome-binding GTPase HYI42_12520 PF16360 GTP-binding GTPase Middle Region HYI42_12520 PF13167 GTP-binding GTPase N-terminal HYI42_12530 PF13091 PLD-like domain HYI42_12540 PF01389 OmpA-like transmembrane domain HYI42_12540 PF00691 OmpA family HYI42_12545 PF17152 Periplasmic sensor domain HYI42_12545 PF00990 Diguanylate cyclase, GGDEF domain HYI42_12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_12580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYI42_12590 PF00753 Metallo-beta-lactamase superfamily HYI42_12590 PF04273 Putative phosphatase (DUF442) HYI42_12595 PF00561 alpha/beta hydrolase fold HYI42_12600 PF00085 Thioredoxin HYI42_12605 PF03061 Thioesterase superfamily HYI42_12615 PF04461 Protein of unknown function (DUF520) HYI42_12625 PF01266 FAD dependent oxidoreductase HYI42_12625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HYI42_12635 PF03795 YCII-related domain HYI42_12640 PF04279 Intracellular septation protein A HYI42_12645 PF02811 PHP domain HYI42_12650 PF01062 Bestrophin, RFP-TM, chloride channel HYI42_12655 PF04002 RadC-like JAB domain HYI42_12660 PF02441 Flavoprotein HYI42_12660 PF04127 DNA / pantothenate metabolism flavoprotein HYI42_12665 PF02355 Protein export membrane protein HYI42_12665 PF07549 SecD/SecF GG Motif HYI42_12670 PF13721 SecD export protein N-terminal TM region HYI42_12670 PF02355 Protein export membrane protein HYI42_12670 PF07549 SecD/SecF GG Motif HYI42_12675 PF02699 Preprotein translocase subunit HYI42_12680 PF01702 Queuine tRNA-ribosyltransferase HYI42_12695 PF02547 Queuosine biosynthesis protein HYI42_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_12705 PF00512 His Kinase A (phospho-acceptor) domain HYI42_12705 PF07689 KaiB domain HYI42_12710 PF08335 GlnD PII-uridylyltransferase HYI42_12710 PF03710 Glutamate-ammonia ligase adenylyltransferase HYI42_12715 PF01063 Amino-transferase class IV HYI42_12730 PF01522 Polysaccharide deacetylase HYI42_12735 PF00535 Glycosyl transferase family 2 HYI42_12740 PF00534 Glycosyl transferases group 1 HYI42_12740 PF13439 Glycosyltransferase Family 4 HYI42_12770 PF00152 tRNA synthetases class II (D, K and N) HYI42_12770 PF01336 OB-fold nucleic acid binding domain HYI42_12770 PF02938 GAD domain HYI42_12780 PF00593 TonB dependent receptor HYI42_12780 PF07715 TonB-dependent Receptor Plug Domain HYI42_12800 PF06146 Phosphate-starvation-inducible E HYI42_12805 PF12806 Acetyl-CoA dehydrogenase C-terminal like HYI42_12805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_12805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_12805 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_12810 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_12810 PF12806 Acetyl-CoA dehydrogenase C-terminal like HYI42_12810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_12810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_12820 PF00512 His Kinase A (phospho-acceptor) domain HYI42_12820 PF00672 HAMP domain HYI42_12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_12825 PF00072 Response regulator receiver domain HYI42_12825 PF00486 Transcriptional regulatory protein, C terminal HYI42_12830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HYI42_12850 PF01923 Cobalamin adenosyltransferase HYI42_12855 PF07715 TonB-dependent Receptor Plug Domain HYI42_12855 PF00593 TonB dependent receptor HYI42_12860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HYI42_12865 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_12890 PF00290 Tryptophan synthase alpha chain HYI42_12895 PF01039 Carboxyl transferase domain HYI42_12900 PF02875 Mur ligase family, glutamate ligase domain HYI42_12900 PF08245 Mur ligase middle domain HYI42_12915 PF00753 Metallo-beta-lactamase superfamily HYI42_12920 PF10417 C-terminal domain of 1-Cys peroxiredoxin HYI42_12920 PF00578 AhpC/TSA family HYI42_12925 PF07517 SecA DEAD-like domain HYI42_12925 PF07516 SecA Wing and Scaffold domain HYI42_12925 PF02810 SEC-C motif HYI42_12925 PF01043 SecA preprotein cross-linking domain HYI42_12935 PF00083 Sugar (and other) transporter HYI42_12935 PF07690 Major Facilitator Superfamily HYI42_12940 PF03006 Haemolysin-III related HYI42_12950 PF13673 Acetyltransferase (GNAT) domain HYI42_12965 PF00378 Enoyl-CoA hydratase/isomerase HYI42_12965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYI42_12965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYI42_12970 PF02803 Thiolase, C-terminal domain HYI42_12970 PF00108 Thiolase, N-terminal domain HYI42_12975 PF12833 Helix-turn-helix domain HYI42_12975 PF02311 AraC-like ligand binding domain HYI42_12980 PF02515 CoA-transferase family III HYI42_12985 PF04966 Carbohydrate-selective porin, OprB family HYI42_12990 PF01011 PQQ enzyme repeat HYI42_12995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYI42_12995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYI42_13005 PF00893 Small Multidrug Resistance protein HYI42_13015 PF02803 Thiolase, C-terminal domain HYI42_13015 PF00108 Thiolase, N-terminal domain HYI42_13025 PF13505 Outer membrane protein beta-barrel domain HYI42_13025 PF00691 OmpA family HYI42_13035 PF01139 tRNA-splicing ligase RtcB HYI42_13040 PF00324 Amino acid permease HYI42_13045 PF08468 Methyltransferase small domain N-terminal HYI42_13045 PF05175 Methyltransferase small domain HYI42_13050 PF00860 Permease family HYI42_13060 PF01741 Large-conductance mechanosensitive channel, MscL HYI42_13080 PF02245 Methylpurine-DNA glycosylase (MPG) HYI42_13085 PF07715 TonB-dependent Receptor Plug Domain HYI42_13085 PF00593 TonB dependent receptor HYI42_13090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_13105 PF10411 Disulfide bond isomerase protein N-terminus HYI42_13105 PF13098 Thioredoxin-like domain HYI42_13110 PF01571 Aminomethyltransferase folate-binding domain HYI42_13120 PF04343 Protein of unknown function, DUF488 HYI42_13125 PF08274 PhnA Zinc-Ribbon HYI42_13125 PF03831 PhnA domain HYI42_13130 PF07411 Domain of unknown function (DUF1508) HYI42_13135 PF03129 Anticodon binding domain HYI42_13135 PF04073 Aminoacyl-tRNA editing domain HYI42_13135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYI42_13140 PF00873 AcrB/AcrD/AcrF family HYI42_13155 PF00072 Response regulator receiver domain HYI42_13160 PF00072 Response regulator receiver domain HYI42_13165 PF01584 CheW-like domain HYI42_13170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HYI42_13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYI42_13175 PF00072 Response regulator receiver domain HYI42_13175 PF01627 Hpt domain HYI42_13175 PF01584 CheW-like domain HYI42_13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_13185 PF04055 Radical SAM superfamily HYI42_13185 PF06969 HemN C-terminal domain HYI42_13195 PF07687 Peptidase dimerisation domain HYI42_13195 PF01546 Peptidase family M20/M25/M40 HYI42_13210 PF04304 Protein of unknown function (DUF454) HYI42_13215 PF17969 L,D-transpeptidase C-terminal domain HYI42_13215 PF03734 L,D-transpeptidase catalytic domain HYI42_13255 PF00175 Oxidoreductase NAD-binding domain HYI42_13255 PF00258 Flavodoxin HYI42_13255 PF00667 FAD binding domain HYI42_13265 PF12805 FUSC-like inner membrane protein yccS HYI42_13270 PF07690 Major Facilitator Superfamily HYI42_13275 PF00881 Nitroreductase family HYI42_13290 PF01235 Sodium:alanine symporter family HYI42_13295 PF01734 Patatin-like phospholipase HYI42_13300 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_13300 PF13291 ACT domain HYI42_13305 PF05992 SbmA/BacA-like family HYI42_13330 PF02637 GatB domain HYI42_13330 PF02934 GatB/GatE catalytic domain HYI42_13335 PF01425 Amidase HYI42_13340 PF02686 Glu-tRNAGln amidotransferase C subunit HYI42_13350 PF04085 rod shape-determining protein MreC HYI42_13355 PF04093 rod shape-determining protein MreD HYI42_13360 PF02545 Maf-like protein HYI42_13365 PF00575 S1 RNA binding domain HYI42_13365 PF10150 Ribonuclease E/G family HYI42_13375 PF06974 Protein of unknown function (DUF1298) HYI42_13375 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HYI42_13380 PF01507 Phosphoadenosine phosphosulfate reductase family HYI42_13395 PF02525 Flavodoxin-like fold HYI42_13415 PF02673 Bacitracin resistance protein BacA HYI42_13420 PF12833 Helix-turn-helix domain HYI42_13420 PF06719 AraC-type transcriptional regulator N-terminus HYI42_13425 PF08659 KR domain HYI42_13425 PF16197 Ketoacyl-synthetase C-terminal extension HYI42_13425 PF09277 Erythronolide synthase, docking HYI42_13425 PF08990 Erythronolide synthase docking HYI42_13425 PF08240 Alcohol dehydrogenase GroES-like domain HYI42_13425 PF00109 Beta-ketoacyl synthase, N-terminal domain HYI42_13425 PF00698 Acyl transferase domain HYI42_13425 PF02801 Beta-ketoacyl synthase, C-terminal domain HYI42_13425 PF00550 Phosphopantetheine attachment site HYI42_13425 PF14765 Polyketide synthase dehydratase HYI42_13430 PF01965 DJ-1/PfpI family HYI42_13525 PF03796 DnaB-like helicase C terminal domain HYI42_13525 PF00772 DnaB-like helicase N terminal domain HYI42_13525 PF14528 LAGLIDADG-like domain HYI42_13575 PF00149 Calcineurin-like phosphoesterase HYI42_13760 PF03869 Arc-like DNA binding domain HYI42_13840 PF00324 Amino acid permease HYI42_13845 PF04303 PrpF protein HYI42_13850 PF00348 Polyprenyl synthetase HYI42_13860 PF01145 SPFH domain / Band 7 family HYI42_13870 PF01734 Patatin-like phospholipase HYI42_13895 PF00072 Response regulator receiver domain HYI42_13895 PF00486 Transcriptional regulatory protein, C terminal HYI42_13900 PF08521 Two-component sensor kinase N-terminal HYI42_13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_13900 PF00512 His Kinase A (phospho-acceptor) domain HYI42_13910 PF00909 Ammonium Transporter Family HYI42_13935 PF08264 Anticodon-binding domain of tRNA HYI42_13935 PF10458 Valyl tRNA synthetase tRNA binding arm HYI42_13935 PF00133 tRNA synthetases class I (I, L, M and V) HYI42_13955 PF01906 Putative heavy-metal-binding HYI42_13960 PF01906 Putative heavy-metal-binding HYI42_13965 PF02321 Outer membrane efflux protein HYI42_13970 PF00873 AcrB/AcrD/AcrF family HYI42_13975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_13975 PF00529 HlyD membrane-fusion protein of T1SS HYI42_13980 PF01569 PAP2 superfamily HYI42_13990 PF00348 Polyprenyl synthetase HYI42_14000 PF00829 Ribosomal prokaryotic L21 protein HYI42_14005 PF01016 Ribosomal L27 protein HYI42_14010 PF03548 Outer membrane lipoprotein carrier protein LolA HYI42_14020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYI42_14020 PF02403 Seryl-tRNA synthetase N-terminal domain HYI42_14025 PF14824 Sirohaem biosynthesis protein central HYI42_14025 PF10414 Sirohaem synthase dimerisation region HYI42_14025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYI42_14030 PF00588 SpoU rRNA Methylase family HYI42_14035 PF01638 HxlR-like helix-turn-helix HYI42_14040 PF03358 NADPH-dependent FMN reductase HYI42_14045 PF13520 Amino acid permease HYI42_14050 PF00465 Iron-containing alcohol dehydrogenase HYI42_14060 PF03099 Biotin/lipoate A/B protein ligase family HYI42_14065 PF04359 Protein of unknown function (DUF493) HYI42_14070 PF04546 Sigma-70, non-essential region HYI42_14070 PF03979 Sigma-70 factor, region 1.1 HYI42_14070 PF04542 Sigma-70 region 2 HYI42_14070 PF04539 Sigma-70 region 3 HYI42_14070 PF00140 Sigma-70 factor, region 1.2 HYI42_14070 PF04545 Sigma-70, region 4 HYI42_14095 PF00285 Citrate synthase, C-terminal domain HYI42_14100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HYI42_14105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HYI42_14110 PF00890 FAD binding domain HYI42_14110 PF02910 Fumarate reductase flavoprotein C-term HYI42_14115 PF13085 2Fe-2S iron-sulfur cluster binding domain HYI42_14130 PF16870 2-oxoglutarate dehydrogenase C-terminal HYI42_14130 PF02779 Transketolase, pyrimidine binding domain HYI42_14130 PF00676 Dehydrogenase E1 component HYI42_14130 PF16078 2-oxoglutarate dehydrogenase N-terminus HYI42_14135 PF02817 e3 binding domain HYI42_14135 PF00364 Biotin-requiring enzyme HYI42_14135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HYI42_14140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYI42_14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_14145 PF08442 ATP-grasp domain HYI42_14145 PF00549 CoA-ligase HYI42_14150 PF02629 CoA binding domain HYI42_14150 PF00549 CoA-ligase HYI42_14165 PF00579 tRNA synthetases class I (W and Y) HYI42_14170 PF05661 Protein of unknown function (DUF808) HYI42_14175 PF04228 Putative neutral zinc metallopeptidase HYI42_14180 PF00999 Sodium/hydrogen exchanger family HYI42_14255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HYI42_14260 PF00582 Universal stress protein family HYI42_14265 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_14270 PF01272 Transcription elongation factor, GreA/GreB, C-term HYI42_14270 PF03449 Transcription elongation factor, N-terminal HYI42_14275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_14275 PF02142 MGS-like domain HYI42_14275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HYI42_14280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HYI42_14280 PF00117 Glutamine amidotransferase class-I HYI42_14295 PF01985 CRS1 / YhbY (CRM) domain HYI42_14300 PF01728 FtsJ-like methyltransferase HYI42_14305 PF06480 FtsH Extracellular HYI42_14305 PF17862 AAA+ lid domain HYI42_14305 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_14305 PF01434 Peptidase family M41 HYI42_14310 PF00809 Pterin binding enzyme HYI42_14330 PF16655 PhoD-like phosphatase, N-terminal domain HYI42_14330 PF09423 PhoD-like phosphatase HYI42_14345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HYI42_14345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HYI42_14360 PF00083 Sugar (and other) transporter HYI42_14365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYI42_14365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYI42_14370 PF01266 FAD dependent oxidoreductase HYI42_14370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HYI42_14375 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HYI42_14375 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HYI42_14380 PF00781 Diacylglycerol kinase catalytic domain HYI42_14385 PF00149 Calcineurin-like phosphoesterase HYI42_14400 PF00166 Chaperonin 10 Kd subunit HYI42_14405 PF00118 TCP-1/cpn60 chaperonin family HYI42_14410 PF01219 Prokaryotic diacylglycerol kinase HYI42_14415 PF00753 Metallo-beta-lactamase superfamily HYI42_14420 PF03009 Glycerophosphoryl diester phosphodiesterase family HYI42_14425 PF00873 AcrB/AcrD/AcrF family HYI42_14435 PF01435 Peptidase family M48 HYI42_14440 PF01464 Transglycosylase SLT domain HYI42_14445 PF01171 PP-loop family HYI42_14455 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYI42_14455 PF01464 Transglycosylase SLT domain HYI42_14460 PF03449 Transcription elongation factor, N-terminal HYI42_14460 PF01272 Transcription elongation factor, GreA/GreB, C-term HYI42_14475 PF00975 Thioesterase domain HYI42_14475 PF13193 AMP-binding enzyme C-terminal domain HYI42_14475 PF00668 Condensation domain HYI42_14475 PF00501 AMP-binding enzyme HYI42_14475 PF00550 Phosphopantetheine attachment site HYI42_14505 PF00881 Nitroreductase family HYI42_14520 PF02595 Glycerate kinase family HYI42_14525 PF00384 Molybdopterin oxidoreductase HYI42_14530 PF02634 FdhD/NarQ family HYI42_14535 PF06803 Protein of unknown function (DUF1232) HYI42_14540 PF11890 Domain of unknown function (DUF3410) HYI42_14540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYI42_14540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYI42_14545 PF00152 tRNA synthetases class II (D, K and N) HYI42_14555 PF18073 Rubredoxin metal binding domain HYI42_14560 PF00324 Amino acid permease HYI42_14570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYI42_14570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYI42_14575 PF01678 Diaminopimelate epimerase HYI42_14580 PF00561 alpha/beta hydrolase fold HYI42_14585 PF01810 LysE type translocator HYI42_14590 PF02899 Phage integrase, N-terminal SAM-like domain HYI42_14590 PF00589 Phage integrase family HYI42_14595 PF01012 Electron transfer flavoprotein domain HYI42_14600 PF00766 Electron transfer flavoprotein FAD-binding domain HYI42_14600 PF01012 Electron transfer flavoprotein domain HYI42_14605 PF00521 DNA gyrase/topoisomerase IV, subunit A HYI42_14605 PF03989 DNA gyrase C-terminal domain, beta-propeller HYI42_14620 PF00535 Glycosyl transferase family 2 HYI42_14640 PF13533 Biotin-lipoyl like HYI42_14650 PF00266 Aminotransferase class-V HYI42_14660 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HYI42_14670 PF02687 FtsX-like permease family HYI42_14670 PF12704 MacB-like periplasmic core domain HYI42_14675 PF00005 ABC transporter HYI42_14680 PF13567 Domain of unknown function (DUF4131) HYI42_14680 PF00753 Metallo-beta-lactamase superfamily HYI42_14680 PF03772 Competence protein HYI42_14690 PF06965 Na+/H+ antiporter 1 HYI42_14690 PF01343 Peptidase family S49 HYI42_14695 PF12697 Alpha/beta hydrolase family HYI42_14700 PF00551 Formyl transferase HYI42_14705 PF02769 AIR synthase related protein, C-terminal domain HYI42_14705 PF00586 AIR synthase related protein, N-terminal domain HYI42_14710 PF01594 AI-2E family transporter HYI42_14715 PF08299 Bacterial dnaA protein helix-turn-helix HYI42_14715 PF00308 Bacterial dnaA protein HYI42_14715 PF11638 DnaA N-terminal domain HYI42_14745 PF00588 SpoU rRNA Methylase family HYI42_14745 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYI42_14750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HYI42_14760 PF00691 OmpA family HYI42_14765 PF04052 TolB amino-terminal domain HYI42_14765 PF07676 WD40-like Beta Propeller Repeat HYI42_14775 PF02472 Biopolymer transport protein ExbD/TolR HYI42_14780 PF01618 MotA/TolQ/ExbB proton channel family HYI42_14785 PF03061 Thioesterase superfamily HYI42_14790 PF01546 Peptidase family M20/M25/M40 HYI42_14790 PF07687 Peptidase dimerisation domain HYI42_14795 PF05491 RuvB C-terminal winged helix domain HYI42_14795 PF17864 RuvB AAA lid domain HYI42_14795 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYI42_14800 PF07499 RuvA, C-terminal domain HYI42_14800 PF01330 RuvA N terminal domain HYI42_14805 PF01966 HD domain HYI42_14810 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HYI42_14810 PF02769 AIR synthase related protein, C-terminal domain HYI42_14810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYI42_14815 PF07690 Major Facilitator Superfamily HYI42_14820 PF01784 NIF3 (NGG1p interacting factor 3) HYI42_14825 PF00378 Enoyl-CoA hydratase/isomerase HYI42_14830 PF01467 Cytidylyltransferase-like HYI42_14830 PF00293 NUDIX domain HYI42_14840 PF00578 AhpC/TSA family HYI42_14855 PF06508 Queuosine biosynthesis protein QueC HYI42_14865 PF14602 Hexapeptide repeat of succinyl-transferase HYI42_14865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HYI42_14865 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_14875 PF03466 LysR substrate binding domain HYI42_14880 PF00005 ABC transporter HYI42_14880 PF12857 TOBE-like domain HYI42_14885 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_14890 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_14905 PF01063 Amino-transferase class IV HYI42_14910 PF02618 YceG-like family HYI42_14915 PF02223 Thymidylate kinase HYI42_14925 PF02910 Fumarate reductase flavoprotein C-term HYI42_14925 PF00890 FAD binding domain HYI42_14930 PF13180 PDZ domain HYI42_14940 PF00679 Elongation factor G C-terminus HYI42_14940 PF00009 Elongation factor Tu GTP binding domain HYI42_14940 PF03144 Elongation factor Tu domain 2 HYI42_14940 PF06421 GTP-binding protein LepA C-terminus HYI42_14945 PF10502 Signal peptidase, peptidase S26 HYI42_14955 PF14622 Ribonuclease-III-like HYI42_14955 PF00035 Double-stranded RNA binding motif HYI42_14960 PF07650 KH domain HYI42_14960 PF01926 50S ribosome-binding GTPase HYI42_14970 PF02565 Recombination protein O C terminal HYI42_14970 PF11967 Recombination protein O N terminal HYI42_14975 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HYI42_14980 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HYI42_14985 PF00106 short chain dehydrogenase HYI42_15015 PF00155 Aminotransferase class I and II HYI42_15025 PF00990 Diguanylate cyclase, GGDEF domain HYI42_15025 PF17151 Periplasmic sensor domain HYI42_15035 PF17757 UvrB interaction domain HYI42_15035 PF04851 Type III restriction enzyme, res subunit HYI42_15035 PF02151 UvrB/uvrC motif HYI42_15035 PF00271 Helicase conserved C-terminal domain HYI42_15035 PF12344 Ultra-violet resistance protein B HYI42_15045 PF00892 EamA-like transporter family HYI42_15050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYI42_15050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYI42_15065 PF01926 50S ribosome-binding GTPase HYI42_15065 PF01018 GTP1/OBG HYI42_15070 PF00696 Amino acid kinase family HYI42_15070 PF01472 PUA domain HYI42_15080 PF07759 Protein of unknown function (DUF1615) HYI42_15085 PF01207 Dihydrouridine synthase (Dus) HYI42_15090 PF03060 Nitronate monooxygenase HYI42_15105 PF02350 UDP-N-acetylglucosamine 2-epimerase HYI42_15135 PF03441 FAD binding domain of DNA photolyase HYI42_15135 PF00875 DNA photolyase HYI42_15140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYI42_15145 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_15150 PF07943 Penicillin-binding protein 5, C-terminal domain HYI42_15150 PF00768 D-alanyl-D-alanine carboxypeptidase HYI42_15160 PF03971 Monomeric isocitrate dehydrogenase HYI42_15165 PF00849 RNA pseudouridylate synthase HYI42_15170 PF00180 Isocitrate/isopropylmalate dehydrogenase HYI42_15185 PF06779 Uncharacterised MFS-type transporter YbfB HYI42_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_15190 PF03466 LysR substrate binding domain HYI42_15200 PF02567 Phenazine biosynthesis-like protein HYI42_15205 PF05193 Peptidase M16 inactive domain HYI42_15205 PF00675 Insulinase (Peptidase family M16) HYI42_15230 PF01867 CRISPR associated protein Cas1 HYI42_15245 PF09614 CRISPR-associated protein (Cas_Csy2) HYI42_15250 PF09615 CRISPR-associated protein (Cas_Csy3) HYI42_15260 PF02581 Thiamine monophosphate synthase HYI42_15265 PF00202 Aminotransferase class-III HYI42_15275 PF00849 RNA pseudouridylate synthase HYI42_15280 PF18337 RapA N-terminal Tudor like domain HYI42_15280 PF00176 SNF2 family N-terminal domain HYI42_15280 PF12137 RNA polymerase recycling family C-terminal HYI42_15280 PF18339 RapA N-terminal Tudor like domain 1 HYI42_15280 PF00271 Helicase conserved C-terminal domain HYI42_15290 PF00440 Bacterial regulatory proteins, tetR family HYI42_15295 PF00970 Oxidoreductase FAD-binding domain HYI42_15295 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_15295 PF00175 Oxidoreductase NAD-binding domain HYI42_15300 PF00487 Fatty acid desaturase HYI42_15310 PF00440 Bacterial regulatory proteins, tetR family HYI42_15310 PF17754 MftR C-terminal domain HYI42_15320 PF00202 Aminotransferase class-III HYI42_15325 PF00282 Pyridoxal-dependent decarboxylase conserved domain HYI42_15330 PF00171 Aldehyde dehydrogenase family HYI42_15335 PF01037 Lrp/AsnC ligand binding domain HYI42_15340 PF00205 Thiamine pyrophosphate enzyme, central domain HYI42_15340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYI42_15340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYI42_15345 PF00324 Amino acid permease HYI42_15350 PF12849 PBP superfamily domain HYI42_15355 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_15360 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_15365 PF00005 ABC transporter HYI42_15370 PF01343 Peptidase family S49 HYI42_15370 PF08496 Peptidase family S49 N-terminal HYI42_15385 PF08328 Adenylosuccinate lyase C-terminal HYI42_15385 PF00206 Lyase HYI42_15400 PF13344 Haloacid dehalogenase-like hydrolase HYI42_15400 PF00293 NUDIX domain HYI42_15405 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_15410 PF00768 D-alanyl-D-alanine carboxypeptidase HYI42_15410 PF07943 Penicillin-binding protein 5, C-terminal domain HYI42_15425 PF01975 Survival protein SurE HYI42_15430 PF01476 LysM domain HYI42_15430 PF01551 Peptidase family M23 HYI42_15435 PF03466 LysR substrate binding domain HYI42_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_15440 PF13654 AAA domain HYI42_15440 PF05362 Lon protease (S16) C-terminal proteolytic domain HYI42_15445 PF07690 Major Facilitator Superfamily HYI42_15450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYI42_15455 PF13593 SBF-like CPA transporter family (DUF4137) HYI42_15460 PF01197 Ribosomal protein L31 HYI42_15465 PF00563 EAL domain HYI42_15465 PF12792 CSS motif domain associated with EAL HYI42_15475 PF04055 Radical SAM superfamily HYI42_15480 PF09285 Elongation factor P, C-terminal HYI42_15480 PF08207 Elongation factor P (EF-P) KOW-like domain HYI42_15480 PF01132 Elongation factor P (EF-P) OB domain HYI42_15485 PF02554 Carbon starvation protein CstA HYI42_15485 PF13722 5TM C-terminal transporter carbon starvation CstA HYI42_15490 PF04328 Selenoprotein, putative HYI42_15500 PF03466 LysR substrate binding domain HYI42_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_15505 PF00557 Metallopeptidase family M24 HYI42_15510 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_15515 PF02028 BCCT, betaine/carnitine/choline family transporter HYI42_15520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HYI42_15520 PF00355 Rieske [2Fe-2S] domain HYI42_15525 PF00171 Aldehyde dehydrogenase family HYI42_15530 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_15530 PF18113 Rubredoxin binding C-terminal domain HYI42_15535 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HYI42_15535 PF01266 FAD dependent oxidoreductase HYI42_15565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HYI42_15595 PF17954 Quercetinase C-terminal cupin domain HYI42_15595 PF02678 Pirin HYI42_15600 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_15605 PF13309 HTH domain HYI42_15605 PF08348 YheO-like PAS domain HYI42_15615 PF00501 AMP-binding enzyme HYI42_15615 PF13193 AMP-binding enzyme C-terminal domain HYI42_15615 PF00550 Phosphopantetheine attachment site HYI42_15615 PF00668 Condensation domain HYI42_15620 PF00550 Phosphopantetheine attachment site HYI42_15620 PF00668 Condensation domain HYI42_15620 PF13193 AMP-binding enzyme C-terminal domain HYI42_15620 PF00501 AMP-binding enzyme HYI42_15620 PF00975 Thioesterase domain HYI42_15625 PF01032 FecCD transport family HYI42_15630 PF01032 FecCD transport family HYI42_15635 PF00005 ABC transporter HYI42_15640 PF01497 Periplasmic binding protein HYI42_15645 PF00593 TonB dependent receptor HYI42_15645 PF07715 TonB-dependent Receptor Plug Domain HYI42_15650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HYI42_15660 PF13193 AMP-binding enzyme C-terminal domain HYI42_15660 PF00501 AMP-binding enzyme HYI42_15665 PF00857 Isochorismatase family HYI42_15665 PF00550 Phosphopantetheine attachment site HYI42_15675 PF00664 ABC transporter transmembrane region HYI42_15675 PF00005 ABC transporter HYI42_15680 PF00005 ABC transporter HYI42_15680 PF00664 ABC transporter transmembrane region HYI42_15705 PF01208 Uroporphyrinogen decarboxylase (URO-D) HYI42_15710 PF05675 Protein of unknown function (DUF817) HYI42_15735 PF01799 [2Fe-2S] binding domain HYI42_15735 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_15740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HYI42_15740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HYI42_15755 PF00218 Indole-3-glycerol phosphate synthase HYI42_15760 PF00591 Glycosyl transferase family, a/b domain HYI42_15760 PF02885 Glycosyl transferase family, helical bundle domain HYI42_15765 PF07715 TonB-dependent Receptor Plug Domain HYI42_15765 PF00593 TonB dependent receptor HYI42_15770 PF11838 ERAP1-like C-terminal domain HYI42_15770 PF01433 Peptidase family M1 domain HYI42_15775 PF00117 Glutamine amidotransferase class-I HYI42_15785 PF00854 POT family HYI42_15790 PF00120 Glutamine synthetase, catalytic domain HYI42_15790 PF03951 Glutamine synthetase, beta-Grasp domain HYI42_15795 PF04345 Chorismate lyase HYI42_15800 PF01040 UbiA prenyltransferase family HYI42_15835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HYI42_15835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HYI42_15840 PF01784 NIF3 (NGG1p interacting factor 3) HYI42_15845 PF13180 PDZ domain HYI42_15850 PF12627 Probable RNA and SrmB- binding site of polymerase A HYI42_15850 PF01743 Poly A polymerase head domain HYI42_15855 PF01515 Phosphate acetyl/butaryl transferase HYI42_15855 PF03949 Malic enzyme, NAD binding domain HYI42_15855 PF00390 Malic enzyme, N-terminal domain HYI42_15870 PF04452 RNA methyltransferase HYI42_15875 PF02219 Methylenetetrahydrofolate reductase HYI42_15880 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HYI42_15880 PF05221 S-adenosyl-L-homocysteine hydrolase HYI42_15895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_15895 PF09317 Domain of unknown function (DUF1974) HYI42_15895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_15900 PF04055 Radical SAM superfamily HYI42_15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_15905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYI42_15915 PF07690 Major Facilitator Superfamily HYI42_15925 PF00557 Metallopeptidase family M24 HYI42_15930 PF00318 Ribosomal protein S2 HYI42_15935 PF00889 Elongation factor TS HYI42_15945 PF12833 Helix-turn-helix domain HYI42_15965 PF05036 Sporulation related domain HYI42_15965 PF03330 Lytic transglycolase HYI42_15970 PF13406 Transglycosylase SLT domain HYI42_15975 PF01098 Cell cycle protein HYI42_15985 PF14489 QueF-like protein HYI42_15985 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HYI42_15990 PF01061 ABC-2 type transporter HYI42_15995 PF00005 ABC transporter HYI42_16000 PF00589 Phage integrase family HYI42_16040 PF12684 PDDEXK-like domain of unknown function (DUF3799) HYI42_16040 PF06630 Enterobacterial exodeoxyribonuclease VIII HYI42_16100 PF03796 DnaB-like helicase C terminal domain HYI42_16100 PF00772 DnaB-like helicase N terminal domain HYI42_16320 PF01551 Peptidase family M23 HYI42_16320 PF08525 Opacity-associated protein A N-terminal motif HYI42_16320 PF01476 LysM domain HYI42_16400 PF00464 Serine hydroxymethyltransferase HYI42_16405 PF02321 Outer membrane efflux protein HYI42_16410 PF00873 AcrB/AcrD/AcrF family HYI42_16415 PF13533 Biotin-lipoyl like HYI42_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_16420 PF03466 LysR substrate binding domain HYI42_16425 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYI42_16430 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_16435 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_16445 PF00893 Small Multidrug Resistance protein HYI42_16450 PF00037 4Fe-4S binding domain HYI42_16460 PF00155 Aminotransferase class I and II HYI42_16460 PF00392 Bacterial regulatory proteins, gntR family HYI42_16465 PF02567 Phenazine biosynthesis-like protein HYI42_16470 PF00970 Oxidoreductase FAD-binding domain HYI42_16470 PF00175 Oxidoreductase NAD-binding domain HYI42_16475 PF18389 TrmO C-terminal domain HYI42_16475 PF01980 tRNA-methyltransferase O HYI42_16485 PF00437 Type II/IV secretion system protein HYI42_16495 PF00072 Response regulator receiver domain HYI42_16495 PF00486 Transcriptional regulatory protein, C terminal HYI42_16500 PF00512 His Kinase A (phospho-acceptor) domain HYI42_16500 PF08521 Two-component sensor kinase N-terminal HYI42_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_16510 PF00293 NUDIX domain HYI42_16525 PF01513 ATP-NAD kinase HYI42_16530 PF07023 Protein of unknown function (DUF1315) HYI42_16535 PF02885 Glycosyl transferase family, helical bundle domain HYI42_16535 PF00591 Glycosyl transferase family, a/b domain HYI42_16540 PF00375 Sodium:dicarboxylate symporter family HYI42_16545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_16545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_16545 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_16550 PF00756 Putative esterase HYI42_16555 PF01817 Chorismate mutase type II HYI42_16555 PF00800 Prephenate dehydratase HYI42_16555 PF01842 ACT domain HYI42_16560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYI42_16570 PF01546 Peptidase family M20/M25/M40 HYI42_16570 PF07687 Peptidase dimerisation domain HYI42_16575 PF00753 Metallo-beta-lactamase superfamily HYI42_16585 PF03883 Peroxide stress protein YaaA HYI42_16590 PF05690 Thiazole biosynthesis protein ThiG HYI42_16600 PF04241 Protein of unknown function (DUF423) HYI42_16605 PF00140 Sigma-70 factor, region 1.2 HYI42_16605 PF04545 Sigma-70, region 4 HYI42_16605 PF04542 Sigma-70 region 2 HYI42_16615 PF00313 'Cold-shock' DNA-binding domain HYI42_16620 PF00270 DEAD/DEAH box helicase HYI42_16620 PF00271 Helicase conserved C-terminal domain HYI42_16630 PF00881 Nitroreductase family HYI42_16635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HYI42_16635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HYI42_16655 PF01180 Dihydroorotate dehydrogenase HYI42_16660 PF02674 Colicin V production protein HYI42_16665 PF00156 Phosphoribosyl transferase domain HYI42_16680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYI42_16680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYI42_16685 PF01435 Peptidase family M48 HYI42_16690 PF09424 Yqey-like protein HYI42_16695 PF01165 Ribosomal protein S21 HYI42_16700 PF00814 Glycoprotease family HYI42_16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_16745 PF03466 LysR substrate binding domain HYI42_16750 PF00202 Aminotransferase class-III HYI42_16755 PF00171 Aldehyde dehydrogenase family HYI42_16760 PF00324 Amino acid permease HYI42_16790 PF04076 Bacterial OB fold (BOF) protein HYI42_16815 PF00561 alpha/beta hydrolase fold HYI42_16820 PF03616 Sodium/glutamate symporter HYI42_16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_16830 PF03466 LysR substrate binding domain HYI42_16835 PF00248 Aldo/keto reductase family HYI42_16840 PF00106 short chain dehydrogenase HYI42_16855 PF00392 Bacterial regulatory proteins, gntR family HYI42_16855 PF07729 FCD domain HYI42_16915 PF00083 Sugar (and other) transporter HYI42_16915 PF08946 Osmosensory transporter coiled coil HYI42_16940 PF04403 Paraquat-inducible protein A HYI42_16945 PF02470 MlaD protein HYI42_16955 PF00576 HIUase/Transthyretin family HYI42_16965 PF00486 Transcriptional regulatory protein, C terminal HYI42_16965 PF00072 Response regulator receiver domain HYI42_16970 PF00512 His Kinase A (phospho-acceptor) domain HYI42_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_16970 PF00672 HAMP domain HYI42_17010 PF08521 Two-component sensor kinase N-terminal HYI42_17010 PF00512 His Kinase A (phospho-acceptor) domain HYI42_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_17015 PF00486 Transcriptional regulatory protein, C terminal HYI42_17015 PF00072 Response regulator receiver domain HYI42_17035 PF01177 Asp/Glu/Hydantoin racemase HYI42_17045 PF07995 Glucose / Sorbosone dehydrogenase HYI42_17065 PF00375 Sodium:dicarboxylate symporter family HYI42_17075 PF16123 Hydroxyacylglutathione hydrolase C-terminus HYI42_17075 PF00753 Metallo-beta-lactamase superfamily HYI42_17080 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_17085 PF09383 NIL domain HYI42_17085 PF00005 ABC transporter HYI42_17090 PF03180 NLPA lipoprotein HYI42_17095 PF02844 Phosphoribosylglycinamide synthetase, N domain HYI42_17095 PF02843 Phosphoribosylglycinamide synthetase, C domain HYI42_17095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HYI42_17100 PF02142 MGS-like domain HYI42_17100 PF01808 AICARFT/IMPCHase bienzyme HYI42_17105 PF02954 Bacterial regulatory protein, Fis family HYI42_17125 PF01134 Glucose inhibited division protein A HYI42_17125 PF13932 GidA associated domain HYI42_17135 PF14403 Circularly permuted ATP-grasp type 2 HYI42_17145 PF01841 Transglutaminase-like superfamily HYI42_17145 PF08379 Bacterial transglutaminase-like N-terminal region HYI42_17155 PF01168 Alanine racemase, N-terminal domain HYI42_17155 PF00842 Alanine racemase, C-terminal domain HYI42_17160 PF00772 DnaB-like helicase N terminal domain HYI42_17160 PF03796 DnaB-like helicase C terminal domain HYI42_17165 PF01281 Ribosomal protein L9, N-terminal domain HYI42_17165 PF03948 Ribosomal protein L9, C-terminal domain HYI42_17170 PF01084 Ribosomal protein S18 HYI42_17175 PF01250 Ribosomal protein S6 HYI42_17180 PF01040 UbiA prenyltransferase family HYI42_17185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HYI42_17190 PF00510 Cytochrome c oxidase subunit III HYI42_17195 PF00115 Cytochrome C and Quinol oxidase polypeptide I HYI42_17200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HYI42_17200 PF06481 COX Aromatic Rich Motif HYI42_17210 PF00391 PEP-utilising enzyme, mobile domain HYI42_17210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYI42_17210 PF02896 PEP-utilising enzyme, TIM barrel domain HYI42_17215 PF03618 Kinase/pyrophosphorylase HYI42_17230 PF00535 Glycosyl transferase family 2 HYI42_17235 PF13994 PgaD-like protein HYI42_17245 PF00296 Luciferase-like monooxygenase HYI42_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_17260 PF03466 LysR substrate binding domain HYI42_17270 PF00472 RF-1 domain HYI42_17270 PF03462 PCRF domain HYI42_17275 PF17827 PrmC N-terminal domain HYI42_17275 PF13847 Methyltransferase domain HYI42_17280 PF00528 Binding-protein-dependent transport system inner membrane component HYI42_17285 PF09084 NMT1/THI5 like HYI42_17295 PF00106 short chain dehydrogenase HYI42_17300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_17300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_17300 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_17310 PF01613 Flavin reductase like domain HYI42_17315 PF00899 ThiF family HYI42_17320 PF03109 ABC1 family HYI42_17335 PF03814 Potassium-transporting ATPase A subunit HYI42_17345 PF02669 K+-transporting ATPase, c chain HYI42_17355 PF00072 Response regulator receiver domain HYI42_17355 PF00486 Transcriptional regulatory protein, C terminal HYI42_17370 PF03232 Ubiquinone biosynthesis protein COQ7 HYI42_17375 PF07690 Major Facilitator Superfamily HYI42_17380 PF01103 Surface antigen HYI42_17380 PF07244 Surface antigen variable number repeat HYI42_17380 PF17243 POTRA domain TamA domain 1 HYI42_17395 PF06434 Aconitate hydratase 2 N-terminus HYI42_17395 PF00330 Aconitase family (aconitate hydratase) HYI42_17395 PF11791 Aconitate B N-terminal domain HYI42_17405 PF00520 Ion transport protein HYI42_17405 PF00027 Cyclic nucleotide-binding domain HYI42_17410 PF07690 Major Facilitator Superfamily HYI42_17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_17425 PF03466 LysR substrate binding domain HYI42_17430 PF04284 Protein of unknown function (DUF441) HYI42_17455 PF00849 RNA pseudouridylate synthase HYI42_17455 PF01479 S4 domain HYI42_17460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HYI42_17465 PF08676 MutL C terminal dimerisation domain HYI42_17465 PF01119 DNA mismatch repair protein, C-terminal domain HYI42_17485 PF00881 Nitroreductase family HYI42_17500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HYI42_17505 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYI42_17505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HYI42_17510 PF00117 Glutamine amidotransferase class-I HYI42_17510 PF00958 GMP synthase C terminal domain HYI42_17510 PF02540 NAD synthase HYI42_17515 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HYI42_17520 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HYI42_17525 PF13520 Amino acid permease HYI42_17530 PF00171 Aldehyde dehydrogenase family HYI42_17545 PF00465 Iron-containing alcohol dehydrogenase HYI42_17550 PF14493 Helix-turn-helix domain HYI42_17550 PF05970 PIF1-like helicase HYI42_17560 PF02110 Hydroxyethylthiazole kinase family HYI42_17575 PF11940 Domain of unknown function (DUF3458) Ig-like fold HYI42_17575 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HYI42_17575 PF01433 Peptidase family M1 domain HYI42_17615 PF01817 Chorismate mutase type II HYI42_17620 PF01037 Lrp/AsnC ligand binding domain HYI42_17640 PF00440 Bacterial regulatory proteins, tetR family HYI42_17645 PF00593 TonB dependent receptor HYI42_17645 PF07715 TonB-dependent Receptor Plug Domain HYI42_17650 PF00924 Mechanosensitive ion channel HYI42_17700 PF00005 ABC transporter HYI42_17700 PF12848 ABC transporter HYI42_17705 PF00582 Universal stress protein family HYI42_17765 PF02308 MgtC family HYI42_17770 PF03594 Benzoate membrane transport protein HYI42_17775 PF01037 Lrp/AsnC ligand binding domain HYI42_17780 PF01810 LysE type translocator HYI42_17785 PF00923 Transaldolase/Fructose-6-phosphate aldolase HYI42_17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_17790 PF03466 LysR substrate binding domain HYI42_17800 PF00108 Thiolase, N-terminal domain HYI42_17800 PF02803 Thiolase, C-terminal domain HYI42_17810 PF01575 MaoC like domain HYI42_17825 PF07690 Major Facilitator Superfamily HYI42_17830 PF12170 DNA polymerase III tau subunit V interacting with alpha HYI42_17830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HYI42_17830 PF12169 DNA polymerase III subunits gamma and tau domain III HYI42_17835 PF04185 Phosphoesterase family HYI42_17835 PF05506 Domain of unknown function (DUF756) HYI42_17840 PF03061 Thioesterase superfamily HYI42_17845 PF00465 Iron-containing alcohol dehydrogenase HYI42_17855 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYI42_17860 PF01565 FAD binding domain HYI42_17860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HYI42_17875 PF01645 Conserved region in glutamate synthase HYI42_17905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYI42_17905 PF02785 Biotin carboxylase C-terminal domain HYI42_17905 PF00289 Biotin carboxylase, N-terminal domain HYI42_17910 PF00364 Biotin-requiring enzyme HYI42_17915 PF01220 Dehydroquinase class II HYI42_17920 PF13438 Domain of unknown function (DUF4113) HYI42_17920 PF00817 impB/mucB/samB family HYI42_17920 PF11799 impB/mucB/samB family C-terminal domain HYI42_17930 PF00005 ABC transporter HYI42_17935 PF00486 Transcriptional regulatory protein, C terminal HYI42_17935 PF00072 Response regulator receiver domain HYI42_17945 PF04324 BFD-like [2Fe-2S] binding domain HYI42_17945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYI42_17945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYI42_17945 PF13806 Rieske-like [2Fe-2S] domain HYI42_17945 PF18267 Rubredoxin NAD+ reductase C-terminal domain HYI42_17945 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_17950 PF18267 Rubredoxin NAD+ reductase C-terminal domain HYI42_17950 PF04324 BFD-like [2Fe-2S] binding domain HYI42_17950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYI42_17950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYI42_17950 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_17955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYI42_17955 PF00384 Molybdopterin oxidoreductase HYI42_17955 PF04324 BFD-like [2Fe-2S] binding domain HYI42_17955 PF01568 Molydopterin dinucleotide binding domain HYI42_17960 PF12804 MobA-like NTP transferase domain HYI42_17965 PF01568 Molydopterin dinucleotide binding domain HYI42_17965 PF00384 Molybdopterin oxidoreductase HYI42_17965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYI42_17970 PF06463 Molybdenum Cofactor Synthesis C HYI42_17970 PF04055 Radical SAM superfamily HYI42_17980 PF02391 MoaE protein HYI42_17985 PF01967 MoaC family HYI42_17985 PF00994 Probable molybdopterin binding domain HYI42_17990 PF00994 Probable molybdopterin binding domain HYI42_17990 PF03454 MoeA C-terminal region (domain IV) HYI42_17990 PF03453 MoeA N-terminal region (domain I and II) HYI42_17995 PF01638 HxlR-like helix-turn-helix HYI42_18000 PF00155 Aminotransferase class I and II HYI42_18000 PF00392 Bacterial regulatory proteins, gntR family HYI42_18005 PF00892 EamA-like transporter family HYI42_18025 PF02635 DsrE/DsrF-like family HYI42_18030 PF16363 GDP-mannose 4,6 dehydratase HYI42_18035 PF00206 Lyase HYI42_18035 PF10415 Fumarase C C-terminus HYI42_18055 PF01266 FAD dependent oxidoreductase HYI42_18065 PF02542 YgbB family HYI42_18075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYI42_18075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYI42_18080 PF00440 Bacterial regulatory proteins, tetR family HYI42_18085 PF02954 Bacterial regulatory protein, Fis family HYI42_18085 PF00072 Response regulator receiver domain HYI42_18085 PF00158 Sigma-54 interaction domain HYI42_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_18090 PF00512 His Kinase A (phospho-acceptor) domain HYI42_18090 PF00989 PAS fold HYI42_18100 PF04055 Radical SAM superfamily HYI42_18100 PF00919 Uncharacterized protein family UPF0004 HYI42_18100 PF18693 TRAM domain HYI42_18105 PF00696 Amino acid kinase family HYI42_18110 PF01765 Ribosome recycling factor HYI42_18115 PF01255 Putative undecaprenyl diphosphate synthase HYI42_18125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HYI42_18125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HYI42_18125 PF13288 DXP reductoisomerase C-terminal domain HYI42_18145 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HYI42_18145 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_18150 PF07977 FabA-like domain HYI42_18155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HYI42_18155 PF00132 Bacterial transferase hexapeptide (six repeats) HYI42_18170 PF02631 RecX family HYI42_18175 PF00154 recA bacterial DNA recombination protein HYI42_18180 PF01479 S4 domain HYI42_18185 PF13419 Haloacid dehalogenase-like hydrolase HYI42_18215 PF00266 Aminotransferase class-V HYI42_18220 PF00324 Amino acid permease HYI42_18230 PF00082 Subtilase family HYI42_18230 PF05922 Peptidase inhibitor I9 HYI42_18235 PF01740 STAS domain HYI42_18235 PF00916 Sulfate permease family HYI42_18240 PF02586 SOS response associated peptidase (SRAP) HYI42_18245 PF07995 Glucose / Sorbosone dehydrogenase HYI42_18255 PF03707 Bacterial signalling protein N terminal repeat HYI42_18255 PF00990 Diguanylate cyclase, GGDEF domain HYI42_18255 PF00563 EAL domain HYI42_18275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYI42_18275 PF02378 Phosphotransferase system, EIIC HYI42_18280 PF00294 pfkB family carbohydrate kinase HYI42_18285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYI42_18285 PF00381 PTS HPr component phosphorylation site HYI42_18285 PF00391 PEP-utilising enzyme, mobile domain HYI42_18285 PF02896 PEP-utilising enzyme, TIM barrel domain HYI42_18285 PF05524 PEP-utilising enzyme, N-terminal HYI42_18310 PF05525 Branched-chain amino acid transport protein HYI42_18315 PF00557 Metallopeptidase family M24 HYI42_18330 PF00462 Glutaredoxin HYI42_18335 PF00202 Aminotransferase class-III HYI42_18340 PF00571 CBS domain HYI42_18340 PF00478 IMP dehydrogenase / GMP reductase domain HYI42_18365 PF02881 SRP54-type protein, helical bundle domain HYI42_18365 PF00448 SRP54-type protein, GTPase domain HYI42_18375 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HYI42_18385 PF08173 Membrane bound YbgT-like protein HYI42_18390 PF02322 Cytochrome bd terminal oxidase subunit II HYI42_18395 PF01654 Cytochrome bd terminal oxidase subunit I HYI42_18405 PF07290 Protein of unknown function (DUF1449) HYI42_18415 PF00294 pfkB family carbohydrate kinase HYI42_18425 PF05193 Peptidase M16 inactive domain HYI42_18425 PF08367 Peptidase M16C associated HYI42_18425 PF00675 Insulinase (Peptidase family M16) HYI42_18430 PF02253 Phospholipase A1 HYI42_18435 PF02386 Cation transport protein HYI42_18440 PF02080 TrkA-C domain HYI42_18440 PF02254 TrkA-N domain HYI42_18445 PF00585 C-terminal regulatory domain of Threonine dehydratase HYI42_18445 PF00291 Pyridoxal-phosphate dependent enzyme HYI42_18450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HYI42_18465 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYI42_18465 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYI42_18475 PF02617 ATP-dependent Clp protease adaptor protein ClpS HYI42_18480 PF00004 ATPase family associated with various cellular activities (AAA) HYI42_18480 PF07724 AAA domain (Cdc48 subfamily) HYI42_18480 PF17871 AAA lid domain HYI42_18480 PF10431 C-terminal, D2-small domain, of ClpB protein HYI42_18480 PF02861 Clp amino terminal domain, pathogenicity island component HYI42_18485 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HYI42_18490 PF00793 DAHP synthetase I family HYI42_18505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_18505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_18535 PF06418 CTP synthase N-terminus HYI42_18535 PF00117 Glutamine amidotransferase class-I HYI42_18540 PF00793 DAHP synthetase I family HYI42_18545 PF03952 Enolase, N-terminal domain HYI42_18545 PF00113 Enolase, C-terminal TIM barrel domain HYI42_18550 PF04239 Protein of unknown function (DUF421) HYI42_18555 PF04977 Septum formation initiator HYI42_18560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HYI42_18565 PF01144 Coenzyme A transferase HYI42_18570 PF01144 Coenzyme A transferase HYI42_18575 PF02803 Thiolase, C-terminal domain HYI42_18575 PF00108 Thiolase, N-terminal domain HYI42_18580 PF10397 Adenylosuccinate lyase C-terminus HYI42_18580 PF00206 Lyase HYI42_18585 PF00561 alpha/beta hydrolase fold HYI42_18590 PF07690 Major Facilitator Superfamily HYI42_18595 PF02627 Carboxymuconolactone decarboxylase family HYI42_18600 PF00775 Dioxygenase HYI42_18600 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HYI42_18605 PF00775 Dioxygenase HYI42_18610 PF01487 Type I 3-dehydroquinase HYI42_18615 PF05048 Periplasmic copper-binding protein (NosD) HYI42_18620 PF04966 Carbohydrate-selective porin, OprB family HYI42_18625 PF13360 PQQ-like domain HYI42_18625 PF01011 PQQ enzyme repeat HYI42_18635 PF04143 Sulphur transport HYI42_18650 PF01614 Bacterial transcriptional regulator HYI42_18650 PF09339 IclR helix-turn-helix domain HYI42_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_18655 PF03466 LysR substrate binding domain HYI42_18660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYI42_18660 PF02770 Acyl-CoA dehydrogenase, middle domain HYI42_18660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYI42_18675 PF00106 short chain dehydrogenase HYI42_18685 PF07690 Major Facilitator Superfamily HYI42_18695 PF01425 Amidase HYI42_18700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HYI42_18715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HYI42_18715 PF00355 Rieske [2Fe-2S] domain HYI42_18730 PF00175 Oxidoreductase NAD-binding domain HYI42_18730 PF00111 2Fe-2S iron-sulfur cluster binding domain HYI42_18735 PF01613 Flavin reductase like domain HYI42_18745 PF07833 Copper amine oxidase N-terminal domain HYI42_18745 PF02727 Copper amine oxidase, N2 domain HYI42_18745 PF02728 Copper amine oxidase, N3 domain HYI42_18745 PF01179 Copper amine oxidase, enzyme domain HYI42_18755 PF00171 Aldehyde dehydrogenase family HYI42_18760 PF01804 Penicillin amidase HYI42_18765 PF12146 Serine aminopeptidase, S33 HYI42_18770 PF02803 Thiolase, C-terminal domain HYI42_18770 PF00108 Thiolase, N-terminal domain HYI42_18775 PF01144 Coenzyme A transferase HYI42_18780 PF01144 Coenzyme A transferase HYI42_18785 PF04444 Catechol dioxygenase N terminus HYI42_18785 PF00775 Dioxygenase HYI42_18790 PF02426 Muconolactone delta-isomerase HYI42_18795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HYI42_18795 PF13378 Enolase C-terminal domain-like HYI42_18800 PF03466 LysR substrate binding domain HYI42_18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_18810 PF00392 Bacterial regulatory proteins, gntR family HYI42_18810 PF07729 FCD domain HYI42_18815 PF00920 Dehydratase family HYI42_18820 PF07690 Major Facilitator Superfamily HYI42_18830 PF00171 Aldehyde dehydrogenase family HYI42_18840 PF00561 alpha/beta hydrolase fold HYI42_18845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_18850 PF00106 short chain dehydrogenase HYI42_18860 PF09278 MerR, DNA binding HYI42_18860 PF00376 MerR family regulatory protein HYI42_18870 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYI42_18880 PF12706 Beta-lactamase superfamily domain HYI42_18885 PF00440 Bacterial regulatory proteins, tetR family HYI42_18885 PF08359 YsiA-like protein, C-terminal region HYI42_18895 PF00106 short chain dehydrogenase HYI42_18900 PF06314 Acetoacetate decarboxylase (ADC) HYI42_18910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYI42_18915 PF07995 Glucose / Sorbosone dehydrogenase HYI42_18930 PF00857 Isochorismatase family HYI42_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_18935 PF03466 LysR substrate binding domain HYI42_18940 PF07995 Glucose / Sorbosone dehydrogenase HYI42_18945 PF02254 TrkA-N domain HYI42_18945 PF00999 Sodium/hydrogen exchanger family HYI42_18955 PF01546 Peptidase family M20/M25/M40 HYI42_18955 PF07687 Peptidase dimerisation domain HYI42_18995 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) HYI42_19000 PF07690 Major Facilitator Superfamily HYI42_19005 PF04909 Amidohydrolase HYI42_19015 PF00392 Bacterial regulatory proteins, gntR family HYI42_19015 PF07702 UTRA domain HYI42_19020 PF08450 SMP-30/Gluconolactonase/LRE-like region HYI42_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_19030 PF03466 LysR substrate binding domain HYI42_19045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_19045 PF00529 HlyD membrane-fusion protein of T1SS HYI42_19060 PF00171 Aldehyde dehydrogenase family HYI42_19065 PF00920 Dehydratase family HYI42_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_19075 PF03466 LysR substrate binding domain HYI42_19080 PF01370 NAD dependent epimerase/dehydratase family HYI42_19085 PF07690 Major Facilitator Superfamily HYI42_19090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYI42_19090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HYI42_19105 PF14572 Phosphoribosyl synthetase-associated domain HYI42_19105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYI42_19110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HYI42_19125 PF03472 Autoinducer binding domain HYI42_19125 PF00196 Bacterial regulatory proteins, luxR family HYI42_19130 PF01425 Amidase HYI42_19135 PF13533 Biotin-lipoyl like HYI42_19140 PF07690 Major Facilitator Superfamily HYI42_19165 PF01975 Survival protein SurE HYI42_19175 PF13291 ACT domain HYI42_19175 PF04607 Region found in RelA / SpoT proteins HYI42_19175 PF02824 TGS domain HYI42_19210 PF13673 Acetyltransferase (GNAT) domain HYI42_19215 PF12146 Serine aminopeptidase, S33 HYI42_19220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYI42_19220 PF03466 LysR substrate binding domain HYI42_19235 PF12146 Serine aminopeptidase, S33 HYI42_19240 PF02311 AraC-like ligand binding domain HYI42_19240 PF12833 Helix-turn-helix domain HYI42_19250 PF00512 His Kinase A (phospho-acceptor) domain HYI42_19250 PF16527 Two-component sensor protein CpxA, periplasmic domain HYI42_19250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYI42_19250 PF00672 HAMP domain HYI42_19255 PF00072 Response regulator receiver domain HYI42_19255 PF00486 Transcriptional regulatory protein, C terminal HYI42_19260 PF00529 HlyD membrane-fusion protein of T1SS HYI42_19260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HYI42_19265 PF00873 AcrB/AcrD/AcrF family HYI42_19270 PF02321 Outer membrane efflux protein HYI42_19275 PF12146 Serine aminopeptidase, S33 HYI42_19280 PF00743 Flavin-binding monooxygenase-like HYI42_19290 PF01266 FAD dependent oxidoreductase HYI42_19495 PF07715 TonB-dependent Receptor Plug Domain HYI42_19495 PF00593 TonB dependent receptor