locus-tag class description ABAYE0001 PF00308 Bacterial dnaA protein ABAYE0001 PF08299 Bacterial dnaA protein helix-turn-helix ABAYE0001 PF11638 DnaA N-terminal domain ABAYE0002 PF02767 DNA polymerase III beta subunit, central domain ABAYE0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABAYE0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABAYE0003 PF02463 RecF/RecN/SMC N terminal domain ABAYE0004 PF00204 DNA gyrase B ABAYE0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABAYE0004 PF18053 DNA gyrase B subunit insert domain ABAYE0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0004 PF01751 Toprim domain ABAYE0006 PF09335 SNARE associated Golgi protein ABAYE0007 PF00005 ABC transporter ABAYE0007 PF12848 ABC transporter ABAYE0011 PF01521 Iron-sulphur cluster biosynthesis ABAYE0012 PF00561 alpha/beta hydrolase fold ABAYE0013 PF03702 Anhydro-N-acetylmuramic acid kinase ABAYE0014 PF00579 tRNA synthetases class I (W and Y) ABAYE0019 PF00209 Sodium:neurotransmitter symporter family ABAYE0021 PF01029 NusB family ABAYE0021 PF01189 16S rRNA methyltransferase RsmB/F ABAYE0022 PF00551 Formyl transferase ABAYE0022 PF02911 Formyl transferase, C-terminal domain ABAYE0023 PF00920 Dehydratase family ABAYE0026 PF03466 LysR substrate binding domain ABAYE0026 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0027 PF00860 Permease family ABAYE0028 PF00311 Phosphoenolpyruvate carboxylase ABAYE0029 PF00440 Bacterial regulatory proteins, tetR family ABAYE0029 PF08361 MAATS-type transcriptional repressor, C-terminal region ABAYE0030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE0031 PF00873 AcrB/AcrD/AcrF family ABAYE0033 PF00684 DnaJ central domain ABAYE0033 PF00226 DnaJ domain ABAYE0033 PF01556 DnaJ C terminal domain ABAYE0036 PF05173 Dihydrodipicolinate reductase, C-terminus ABAYE0036 PF01113 Dihydrodipicolinate reductase, N-terminus ABAYE0038 PF07690 Major Facilitator Superfamily ABAYE0039 PF00248 Aldo/keto reductase family ABAYE0040 PF03466 LysR substrate binding domain ABAYE0040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0042 PF00392 Bacterial regulatory proteins, gntR family ABAYE0042 PF00155 Aminotransferase class I and II ABAYE0043 PF00107 Zinc-binding dehydrogenase ABAYE0043 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE0044 PF03352 Methyladenine glycosylase ABAYE0047 PF10576 Iron-sulfur binding domain of endonuclease III ABAYE0047 PF00633 Helix-hairpin-helix motif ABAYE0047 PF00730 HhH-GPD superfamily base excision DNA repair protein ABAYE0047 PF14815 NUDIX domain ABAYE0050 PF07043 Protein of unknown function (DUF1328) ABAYE0051 PF03692 Putative zinc- or iron-chelating domain ABAYE0052 PF07995 Glucose / Sorbosone dehydrogenase ABAYE0053 PF16193 AAA C-terminal domain ABAYE0053 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE0053 PF12002 MgsA AAA+ ATPase C terminal ABAYE0054 PF01226 Formate/nitrite transporter ABAYE0056 PF01259 SAICAR synthetase ABAYE0058 PF00701 Dihydrodipicolinate synthetase family ABAYE0059 PF00857 Isochorismatase family ABAYE0060 PF01758 Sodium Bile acid symporter family ABAYE0061 PF01554 MatE ABAYE0062 PF04463 Protein of unknown function (DUF523) ABAYE0064 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABAYE0066 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABAYE0067 PF14497 Glutathione S-transferase, C-terminal domain ABAYE0067 PF02798 Glutathione S-transferase, N-terminal domain ABAYE0069 PF00324 Amino acid permease ABAYE0071 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABAYE0071 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABAYE0073 PF07702 UTRA domain ABAYE0073 PF00392 Bacterial regulatory proteins, gntR family ABAYE0074 PF05962 HutD ABAYE0075 PF17392 Urocanase C-terminal domain ABAYE0075 PF17391 Urocanase N-terminal domain ABAYE0075 PF01175 Urocanase Rossmann-like domain ABAYE0076 PF00221 Aromatic amino acid lyase ABAYE0077 PF00324 Amino acid permease ABAYE0078 PF01979 Amidohydrolase family ABAYE0079 PF00491 Arginase family ABAYE0082 PF01177 Asp/Glu/Hydantoin racemase ABAYE0084 PF00145 C-5 cytosine-specific DNA methylase ABAYE0085 PF01119 DNA mismatch repair protein, C-terminal domain ABAYE0085 PF08676 MutL C terminal dimerisation domain ABAYE0089 PF01380 SIS domain ABAYE0090 PF12804 MobA-like NTP transferase domain ABAYE0090 PF14602 Hexapeptide repeat of succinyl-transferase ABAYE0090 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE0091 PF04608 Phosphatidylglycerophosphatase A ABAYE0093 PF02769 AIR synthase related protein, C-terminal domain ABAYE0093 PF00586 AIR synthase related protein, N-terminal domain ABAYE0094 PF01029 NusB family ABAYE0095 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABAYE0096 PF00925 GTP cyclohydrolase II ABAYE0096 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABAYE0101 PF02580 D-Tyr-tRNA(Tyr) deacylase ABAYE0102 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABAYE0102 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABAYE0103 PF00581 Rhodanese-like domain ABAYE0104 PF02666 Phosphatidylserine decarboxylase ABAYE0106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0106 PF11808 Phosphate regulon sensor protein PhoR ABAYE0106 PF00989 PAS fold ABAYE0106 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0107 PF00486 Transcriptional regulatory protein, C terminal ABAYE0107 PF00072 Response regulator receiver domain ABAYE0109 PF00106 short chain dehydrogenase ABAYE0110 PF01554 MatE ABAYE0111 PF00155 Aminotransferase class I and II ABAYE0112 PF04286 Protein of unknown function (DUF445) ABAYE0116 PF04262 Glutamate-cysteine ligase ABAYE0117 PF02600 Disulfide bond formation protein DsbB ABAYE0118 PF04717 Type VI secretion system, phage-baseplate injector ABAYE0119 PF01510 N-acetylmuramoyl-L-alanine amidase ABAYE0119 PF01471 Putative peptidoglycan binding domain ABAYE0119 PF01476 LysM domain ABAYE0125 PF05728 Uncharacterised protein family (UPF0227) ABAYE0126 PF00204 DNA gyrase B ABAYE0126 PF00986 DNA gyrase B subunit, carboxyl terminus ABAYE0126 PF01751 Toprim domain ABAYE0126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0127 PF04115 Ureidoglycolate lyase ABAYE0128 PF03561 Allantoicase repeat ABAYE0129 PF01494 FAD binding domain ABAYE0131 PF00860 Permease family ABAYE0132 PF00576 HIUase/Transthyretin family ABAYE0138 PF11412 Disulphide bond corrector protein DsbC ABAYE0138 PF02683 Cytochrome C biogenesis protein transmembrane region ABAYE0139 PF07694 5TMR of 5TMR-LYT ABAYE0139 PF00990 Diguanylate cyclase, GGDEF domain ABAYE0140 PF07859 alpha/beta hydrolase fold ABAYE0142 PF03960 ArsC family ABAYE0143 PF03372 Endonuclease/Exonuclease/phosphatase family ABAYE0144 PF00156 Phosphoribosyl transferase domain ABAYE0145 PF00593 TonB dependent receptor ABAYE0145 PF07715 TonB-dependent Receptor Plug Domain ABAYE0147 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABAYE0147 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABAYE0148 PF03033 Glycosyltransferase family 28 N-terminal domain ABAYE0148 PF04101 Glycosyltransferase family 28 C-terminal domain ABAYE0149 PF01225 Mur ligase family, catalytic domain ABAYE0149 PF02875 Mur ligase family, glutamate ligase domain ABAYE0149 PF08245 Mur ligase middle domain ABAYE0150 PF01820 D-ala D-ala ligase N-terminus ABAYE0150 PF07478 D-ala D-ala ligase C-terminus ABAYE0151 PF08478 POTRA domain, FtsQ-type ABAYE0151 PF03799 Cell division protein FtsQ ABAYE0152 PF02491 SHS2 domain inserted in FTSA ABAYE0153 PF12327 FtsZ family, C-terminal domain ABAYE0153 PF00091 Tubulin/FtsZ family, GTPase domain ABAYE0154 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABAYE0156 PF01551 Peptidase family M23 ABAYE0157 PF00456 Transketolase, thiamine diphosphate binding domain ABAYE0157 PF17831 Pyruvate dehydrogenase E1 component middle domain ABAYE0158 PF02817 e3 binding domain ABAYE0158 PF00364 Biotin-requiring enzyme ABAYE0158 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABAYE0161 PF01169 Uncharacterized protein family UPF0016 ABAYE0164 PF00258 Flavodoxin ABAYE0164 PF01613 Flavin reductase like domain ABAYE0165 PF03692 Putative zinc- or iron-chelating domain ABAYE0166 PF00571 CBS domain ABAYE0166 PF00478 IMP dehydrogenase / GMP reductase domain ABAYE0167 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABAYE0167 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABAYE0167 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABAYE0167 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABAYE0168 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABAYE0168 PF01243 Pyridoxamine 5'-phosphate oxidase ABAYE0169 PF01368 DHH family ABAYE0169 PF02272 DHHA1 domain ABAYE0169 PF17768 RecJ OB domain ABAYE0171 PF00472 RF-1 domain ABAYE0171 PF03462 PCRF domain ABAYE0174 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE0175 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABAYE0176 PF04452 RNA methyltransferase ABAYE0177 PF00924 Mechanosensitive ion channel ABAYE0179 PF13193 AMP-binding enzyme C-terminal domain ABAYE0179 PF00501 AMP-binding enzyme ABAYE0179 PF16177 Acetyl-coenzyme A synthetase N-terminus ABAYE0180 PF00857 Isochorismatase family ABAYE0181 PF01037 Lrp/AsnC ligand binding domain ABAYE0182 PF00296 Luciferase-like monooxygenase ABAYE0183 PF03358 NADPH-dependent FMN reductase ABAYE0184 PF00072 Response regulator receiver domain ABAYE0184 PF00196 Bacterial regulatory proteins, luxR family ABAYE0186 PF01627 Hpt domain ABAYE0186 PF00672 HAMP domain ABAYE0186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0186 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0186 PF00072 Response regulator receiver domain ABAYE0187 PF04341 Protein of unknown function, DUF485 ABAYE0188 PF00474 Sodium:solute symporter family ABAYE0190 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE0194 PF00990 Diguanylate cyclase, GGDEF domain ABAYE0194 PF17158 Membrane-associated sensor, integral membrane domain ABAYE0195 PF17760 UvrA interaction domain ABAYE0195 PF00005 ABC transporter ABAYE0195 PF17755 UvrA DNA-binding domain ABAYE0196 PF00440 Bacterial regulatory proteins, tetR family ABAYE0196 PF16925 Tetracyclin repressor-like, C-terminal domain ABAYE0197 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE0197 PF00107 Zinc-binding dehydrogenase ABAYE0199 PF06942 GlpM protein ABAYE0200 PF03070 TENA/THI-4/PQQC family ABAYE0200 PF08543 Phosphomethylpyrimidine kinase ABAYE0200 PF02581 Thiamine monophosphate synthase ABAYE0202 PF07690 Major Facilitator Superfamily ABAYE0203 PF00436 Single-strand binding protein family ABAYE0205 PF03591 AzlC protein ABAYE0207 PF00324 Amino acid permease ABAYE0208 PF00392 Bacterial regulatory proteins, gntR family ABAYE0208 PF00155 Aminotransferase class I and II ABAYE0209 PF00202 Aminotransferase class-III ABAYE0210 PF00171 Aldehyde dehydrogenase family ABAYE0211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0212 PF00857 Isochorismatase family ABAYE0213 PF05726 Pirin C-terminal cupin domain ABAYE0213 PF02678 Pirin ABAYE0214 PF01593 Flavin containing amine oxidoreductase ABAYE0217 PF07690 Major Facilitator Superfamily ABAYE0218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0218 PF03466 LysR substrate binding domain ABAYE0222 PF00248 Aldo/keto reductase family ABAYE0223 PF02311 AraC-like ligand binding domain ABAYE0223 PF12833 Helix-turn-helix domain ABAYE0227 PF01638 HxlR-like helix-turn-helix ABAYE0230 PF01638 HxlR-like helix-turn-helix ABAYE0231 PF02525 Flavodoxin-like fold ABAYE0233 PF13302 Acetyltransferase (GNAT) domain ABAYE0234 PF02705 K+ potassium transporter ABAYE0240 PF00230 Major intrinsic protein ABAYE0243 PF00977 Histidine biosynthesis protein ABAYE0244 PF01636 Phosphotransferase enzyme family ABAYE0250 PF00977 Histidine biosynthesis protein ABAYE0253 PF00117 Glutamine amidotransferase class-I ABAYE0254 PF00475 Imidazoleglycerol-phosphate dehydratase ABAYE0256 PF00583 Acetyltransferase (GNAT) family ABAYE0257 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABAYE0257 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABAYE0258 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0258 PF00672 HAMP domain ABAYE0258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0259 PF00486 Transcriptional regulatory protein, C terminal ABAYE0259 PF00072 Response regulator receiver domain ABAYE0261 PF16921 Tex protein YqgF-like domain ABAYE0261 PF09371 Tex-like protein N-terminal domain ABAYE0261 PF00575 S1 RNA binding domain ABAYE0261 PF17674 HHH domain ABAYE0262 PF01740 STAS domain ABAYE0262 PF00916 Sulfate permease family ABAYE0263 PF00106 short chain dehydrogenase ABAYE0264 PF01053 Cys/Met metabolism PLP-dependent enzyme ABAYE0265 PF12848 ABC transporter ABAYE0265 PF00005 ABC transporter ABAYE0270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE0270 PF00529 HlyD membrane-fusion protein of T1SS ABAYE0271 PF00873 AcrB/AcrD/AcrF family ABAYE0272 PF01545 Cation efflux family ABAYE0276 PF00324 Amino acid permease ABAYE0277 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABAYE0280 PF01795 MraW methylase family ABAYE0282 PF03717 Penicillin-binding Protein dimerisation domain ABAYE0282 PF00905 Penicillin binding protein transpeptidase domain ABAYE0283 PF02875 Mur ligase family, glutamate ligase domain ABAYE0283 PF08245 Mur ligase middle domain ABAYE0283 PF01225 Mur ligase family, catalytic domain ABAYE0284 PF08245 Mur ligase middle domain ABAYE0284 PF02875 Mur ligase family, glutamate ligase domain ABAYE0284 PF01225 Mur ligase family, catalytic domain ABAYE0285 PF00953 Glycosyl transferase family 4 ABAYE0287 PF13847 Methyltransferase domain ABAYE0288 PF00905 Penicillin binding protein transpeptidase domain ABAYE0288 PF17092 Penicillin-binding protein OB-like domain ABAYE0288 PF00912 Transglycosylase ABAYE0294 PF03958 Bacterial type II/III secretion system short domain ABAYE0294 PF07660 Secretin and TonB N terminus short domain ABAYE0294 PF11741 AMIN domain ABAYE0294 PF00263 Bacterial type II and III secretion system protein ABAYE0295 PF01202 Shikimate kinase ABAYE0296 PF01761 3-dehydroquinate synthase ABAYE0298 PF01645 Conserved region in glutamate synthase ABAYE0298 PF00310 Glutamine amidotransferases class-II ABAYE0298 PF01493 GXGXG motif ABAYE0298 PF04898 Glutamate synthase central domain ABAYE0299 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE0299 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABAYE0301 PF04011 LemA family ABAYE0302 PF04536 TPM domain ABAYE0304 PF00114 Pilin (bacterial filament) ABAYE0304 PF07963 Prokaryotic N-terminal methylation motif ABAYE0306 PF15864 Protein glycosylation ligase ABAYE0306 PF04932 O-Antigen ligase ABAYE0306 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABAYE0307 PF00210 Ferritin-like domain ABAYE0308 PF04324 BFD-like [2Fe-2S] binding domain ABAYE0309 PF01042 Endoribonuclease L-PSP ABAYE0310 PF04607 Region found in RelA / SpoT proteins ABAYE0310 PF13291 ACT domain ABAYE0310 PF02824 TGS domain ABAYE0311 PF01192 RNA polymerase Rpb6 ABAYE0312 PF00625 Guanylate kinase ABAYE0313 PF02401 LytB protein ABAYE0321 PF00886 Ribosomal protein S16 ABAYE0322 PF01782 RimM N-terminal domain ABAYE0322 PF05239 PRC-barrel domain ABAYE0323 PF01746 tRNA (Guanine-1)-methyltransferase ABAYE0324 PF01245 Ribosomal protein L19 ABAYE0325 PF00561 alpha/beta hydrolase fold ABAYE0326 PF03280 Proteobacterial lipase chaperone protein ABAYE0327 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABAYE0327 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABAYE0327 PF09157 Pseudouridine synthase II TruB, C-terminal ABAYE0328 PF01925 Sulfite exporter TauE/SafE ABAYE0330 PF00892 EamA-like transporter family ABAYE0331 PF00892 EamA-like transporter family ABAYE0332 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABAYE0332 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABAYE0333 PF02913 FAD linked oxidases, C-terminal domain ABAYE0333 PF01565 FAD binding domain ABAYE0335 PF03992 Antibiotic biosynthesis monooxygenase ABAYE0336 PF02525 Flavodoxin-like fold ABAYE0338 PF07690 Major Facilitator Superfamily ABAYE0339 PF12805 FUSC-like inner membrane protein yccS ABAYE0340 PF00080 Copper/zinc superoxide dismutase (SODC) ABAYE0342 PF01594 AI-2E family transporter ABAYE0343 PF13614 AAA domain ABAYE0347 PF08241 Methyltransferase domain ABAYE0349 PF00324 Amino acid permease ABAYE0351 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABAYE0351 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABAYE0352 PF00202 Aminotransferase class-III ABAYE0353 PF04958 Arginine N-succinyltransferase beta subunit ABAYE0354 PF00171 Aldehyde dehydrogenase family ABAYE0355 PF04996 Succinylarginine dihydrolase ABAYE0356 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABAYE0362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0362 PF03466 LysR substrate binding domain ABAYE0363 PF00892 EamA-like transporter family ABAYE0367 PF05746 DALR anticodon binding domain ABAYE0367 PF02092 Glycyl-tRNA synthetase beta subunit ABAYE0368 PF02091 Glycyl-tRNA synthetase alpha subunit ABAYE0369 PF07690 Major Facilitator Superfamily ABAYE0372 PF00571 CBS domain ABAYE0373 PF04024 PspC domain ABAYE0375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0375 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0375 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABAYE0375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0377 PF08501 Shikimate dehydrogenase substrate binding domain ABAYE0377 PF01488 Shikimate / quinate 5-dehydrogenase ABAYE0377 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABAYE0378 PF01218 Coproporphyrinogen III oxidase ABAYE0379 PF00925 GTP cyclohydrolase II ABAYE0381 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABAYE0381 PF02779 Transketolase, pyrimidine binding domain ABAYE0381 PF02780 Transketolase, C-terminal domain ABAYE0382 PF00459 Inositol monophosphatase family ABAYE0383 PF00270 DEAD/DEAH box helicase ABAYE0383 PF12343 Cold shock protein DEAD box A ABAYE0383 PF00271 Helicase conserved C-terminal domain ABAYE0383 PF03880 DbpA RNA binding domain ABAYE0385 PF00005 ABC transporter ABAYE0386 PF02405 Permease MlaE ABAYE0388 PF05494 MlaC protein ABAYE0390 PF01544 CorA-like Mg2+ transporter protein ABAYE0391 PF03641 Possible lysine decarboxylase ABAYE0392 PF00293 NUDIX domain ABAYE0393 PF00156 Phosphoribosyl transferase domain ABAYE0394 PF17191 RecG wedge domain ABAYE0394 PF00270 DEAD/DEAH box helicase ABAYE0394 PF00271 Helicase conserved C-terminal domain ABAYE0397 PF01553 Acyltransferase ABAYE0399 PF00375 Sodium:dicarboxylate symporter family ABAYE0401 PF01926 50S ribosome-binding GTPase ABAYE0402 PF02082 Transcriptional regulator ABAYE0403 PF00175 Oxidoreductase NAD-binding domain ABAYE0403 PF00970 Oxidoreductase FAD-binding domain ABAYE0403 PF00042 Globin ABAYE0404 PF05872 Bacterial protein of unknown function (DUF853) ABAYE0405 PF01053 Cys/Met metabolism PLP-dependent enzyme ABAYE0406 PF00117 Glutamine amidotransferase class-I ABAYE0407 PF00338 Ribosomal protein S10p/S20e ABAYE0408 PF00297 Ribosomal protein L3 ABAYE0409 PF00573 Ribosomal protein L4/L1 family ABAYE0410 PF00276 Ribosomal protein L23 ABAYE0411 PF03947 Ribosomal Proteins L2, C-terminal domain ABAYE0411 PF00181 Ribosomal Proteins L2, RNA binding domain ABAYE0412 PF00203 Ribosomal protein S19 ABAYE0413 PF00237 Ribosomal protein L22p/L17e ABAYE0414 PF00189 Ribosomal protein S3, C-terminal domain ABAYE0414 PF07650 KH domain ABAYE0415 PF00252 Ribosomal protein L16p/L10e ABAYE0416 PF00831 Ribosomal L29 protein ABAYE0417 PF00366 Ribosomal protein S17 ABAYE0418 PF00238 Ribosomal protein L14p/L23e ABAYE0419 PF00467 KOW motif ABAYE0419 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABAYE0420 PF00673 ribosomal L5P family C-terminus ABAYE0420 PF00281 Ribosomal protein L5 ABAYE0421 PF00253 Ribosomal protein S14p/S29e ABAYE0422 PF00410 Ribosomal protein S8 ABAYE0423 PF00347 Ribosomal protein L6 ABAYE0424 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABAYE0425 PF03719 Ribosomal protein S5, C-terminal domain ABAYE0425 PF00333 Ribosomal protein S5, N-terminal domain ABAYE0426 PF00327 Ribosomal protein L30p/L7e ABAYE0427 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABAYE0428 PF00344 SecY translocase ABAYE0429 PF00444 Ribosomal protein L36 ABAYE0430 PF00416 Ribosomal protein S13/S18 ABAYE0431 PF00411 Ribosomal protein S11 ABAYE0432 PF00163 Ribosomal protein S4/S9 N-terminal domain ABAYE0432 PF01479 S4 domain ABAYE0433 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABAYE0433 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABAYE0433 PF01000 RNA polymerase Rpb3/RpoA insert domain ABAYE0434 PF01196 Ribosomal protein L17 ABAYE0435 PF00743 Flavin-binding monooxygenase-like ABAYE0436 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0436 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0436 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0437 PF03937 Flavinator of succinate dehydrogenase ABAYE0443 PF09526 Probable metal-binding protein (DUF2387) ABAYE0444 PF01432 Peptidase family M3 ABAYE0445 PF17876 Cold shock domain ABAYE0445 PF08461 Ribonuclease R winged-helix domain ABAYE0445 PF00575 S1 RNA binding domain ABAYE0445 PF00773 RNB domain ABAYE0445 PF08206 Ribonuclease B OB domain ABAYE0451 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABAYE0452 PF12833 Helix-turn-helix domain ABAYE0453 PF00892 EamA-like transporter family ABAYE0454 PF03631 Virulence factor BrkB ABAYE0455 PF03358 NADPH-dependent FMN reductase ABAYE0460 PF02130 Uncharacterized protein family UPF0054 ABAYE0461 PF02562 PhoH-like protein ABAYE0462 PF00919 Uncharacterized protein family UPF0004 ABAYE0462 PF01938 TRAM domain ABAYE0462 PF04055 Radical SAM superfamily ABAYE0463 PF01551 Peptidase family M23 ABAYE0463 PF10145 Phage-related minor tail protein ABAYE0463 PF01464 Transglycosylase SLT domain ABAYE0465 PF00056 lactate/malate dehydrogenase, NAD binding domain ABAYE0465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABAYE0469 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABAYE0470 PF01066 CDP-alcohol phosphatidyltransferase ABAYE0476 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0476 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0476 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0477 PF00440 Bacterial regulatory proteins, tetR family ABAYE0477 PF17932 Tetracyclin repressor-like, C-terminal domain ABAYE0480 PF01039 Carboxyl transferase domain ABAYE0481 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0481 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0481 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0483 PF02785 Biotin carboxylase C-terminal domain ABAYE0483 PF00289 Biotin carboxylase, N-terminal domain ABAYE0483 PF00364 Biotin-requiring enzyme ABAYE0483 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE0485 PF04386 Stringent starvation protein B ABAYE0486 PF13417 Glutathione S-transferase, N-terminal domain ABAYE0486 PF00043 Glutathione S-transferase, C-terminal domain ABAYE0487 PF00380 Ribosomal protein S9/S16 ABAYE0488 PF00572 Ribosomal protein L13 ABAYE0489 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABAYE0490 PF00398 Ribosomal RNA adenine dimethylase ABAYE0491 PF00149 Calcineurin-like phosphoesterase ABAYE0495 PF13167 GTP-binding GTPase N-terminal ABAYE0495 PF16360 GTP-binding GTPase Middle Region ABAYE0495 PF01926 50S ribosome-binding GTPase ABAYE0498 PF13091 PLD-like domain ABAYE0499 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABAYE0499 PF00149 Calcineurin-like phosphoesterase ABAYE0500 PF00691 OmpA family ABAYE0500 PF01389 OmpA-like transmembrane domain ABAYE0501 PF17152 Periplasmic sensor domain ABAYE0501 PF00990 Diguanylate cyclase, GGDEF domain ABAYE0505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE0505 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE0507 PF00753 Metallo-beta-lactamase superfamily ABAYE0507 PF04273 Putative phosphatase (DUF442) ABAYE0512 PF00085 Thioredoxin ABAYE0513 PF03061 Thioesterase superfamily ABAYE0515 PF04461 Protein of unknown function (DUF520) ABAYE0517 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABAYE0517 PF01266 FAD dependent oxidoreductase ABAYE0519 PF03795 YCII-related domain ABAYE0520 PF04279 Intracellular septation protein A ABAYE0521 PF02811 PHP domain ABAYE0522 PF01062 Bestrophin, RFP-TM, chloride channel ABAYE0523 PF04002 RadC-like JAB domain ABAYE0524 PF04127 DNA / pantothenate metabolism flavoprotein ABAYE0524 PF02441 Flavoprotein ABAYE0525 PF02355 Protein export membrane protein ABAYE0525 PF07549 SecD/SecF GG Motif ABAYE0526 PF07549 SecD/SecF GG Motif ABAYE0526 PF13721 SecD export protein N-terminal TM region ABAYE0526 PF02355 Protein export membrane protein ABAYE0527 PF02699 Preprotein translocase subunit ABAYE0528 PF01702 Queuine tRNA-ribosyltransferase ABAYE0531 PF02547 Queuosine biosynthesis protein ABAYE0535 PF00929 Exonuclease ABAYE0536 PF00436 Single-strand binding protein family ABAYE0545 PF10549 ORF11CD3 domain ABAYE0545 PF09669 Phage regulatory protein Rha (Phage_pRha) ABAYE0548 PF00533 BRCA1 C Terminus (BRCT) domain ABAYE0548 PF12826 Helix-hairpin-helix motif ABAYE0548 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABAYE0548 PF03120 NAD-dependent DNA ligase OB-fold domain ABAYE0548 PF01653 NAD-dependent DNA ligase adenylation domain ABAYE0565 PF01510 N-acetylmuramoyl-L-alanine amidase ABAYE0565 PF01471 Putative peptidoglycan binding domain ABAYE0575 PF07689 KaiB domain ABAYE0575 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0576 PF08335 GlnD PII-uridylyltransferase ABAYE0576 PF03710 Glutamate-ammonia ligase adenylyltransferase ABAYE0577 PF01063 Amino-transferase class IV ABAYE0580 PF01522 Polysaccharide deacetylase ABAYE0581 PF00535 Glycosyl transferase family 2 ABAYE0582 PF13439 Glycosyltransferase Family 4 ABAYE0582 PF00534 Glycosyl transferases group 1 ABAYE0587 PF17101 Stealth protein CR1, conserved region 1 ABAYE0587 PF11380 Stealth protein CR2, conserved region 2 ABAYE0587 PF17102 Stealth protein CR3, conserved region 3 ABAYE0588 PF01336 OB-fold nucleic acid binding domain ABAYE0588 PF02938 GAD domain ABAYE0588 PF00152 tRNA synthetases class II (D, K and N) ABAYE0591 PF00593 TonB dependent receptor ABAYE0591 PF07715 TonB-dependent Receptor Plug Domain ABAYE0595 PF06146 Phosphate-starvation-inducible E ABAYE0596 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0596 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABAYE0596 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0596 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0597 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE0597 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE0597 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABAYE0597 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE0599 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0599 PF00672 HAMP domain ABAYE0600 PF00072 Response regulator receiver domain ABAYE0600 PF00486 Transcriptional regulatory protein, C terminal ABAYE0601 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABAYE0605 PF01923 Cobalamin adenosyltransferase ABAYE0606 PF07715 TonB-dependent Receptor Plug Domain ABAYE0606 PF00593 TonB dependent receptor ABAYE0607 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABAYE0608 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE0613 PF00290 Tryptophan synthase alpha chain ABAYE0614 PF01039 Carboxyl transferase domain ABAYE0615 PF02875 Mur ligase family, glutamate ligase domain ABAYE0615 PF08245 Mur ligase middle domain ABAYE0618 PF00753 Metallo-beta-lactamase superfamily ABAYE0619 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABAYE0619 PF00578 AhpC/TSA family ABAYE0620 PF07516 SecA Wing and Scaffold domain ABAYE0620 PF02810 SEC-C motif ABAYE0620 PF07517 SecA DEAD-like domain ABAYE0620 PF01043 SecA preprotein cross-linking domain ABAYE0622 PF07690 Major Facilitator Superfamily ABAYE0622 PF00083 Sugar (and other) transporter ABAYE0623 PF03006 Haemolysin-III related ABAYE0625 PF13673 Acetyltransferase (GNAT) domain ABAYE0628 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABAYE0628 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABAYE0628 PF00378 Enoyl-CoA hydratase/isomerase ABAYE0629 PF00108 Thiolase, N-terminal domain ABAYE0629 PF02803 Thiolase, C-terminal domain ABAYE0630 PF02311 AraC-like ligand binding domain ABAYE0630 PF12833 Helix-turn-helix domain ABAYE0631 PF02515 CoA-transferase family III ABAYE0632 PF04966 Carbohydrate-selective porin, OprB family ABAYE0633 PF01011 PQQ enzyme repeat ABAYE0634 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABAYE0634 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABAYE0636 PF00893 Small Multidrug Resistance protein ABAYE0638 PF00108 Thiolase, N-terminal domain ABAYE0638 PF02803 Thiolase, C-terminal domain ABAYE0640 PF00691 OmpA family ABAYE0640 PF13505 Outer membrane protein beta-barrel domain ABAYE0642 PF01139 tRNA-splicing ligase RtcB ABAYE0643 PF00324 Amino acid permease ABAYE0644 PF05175 Methyltransferase small domain ABAYE0644 PF08468 Methyltransferase small domain N-terminal ABAYE0645 PF00860 Permease family ABAYE0647 PF01741 Large-conductance mechanosensitive channel, MscL ABAYE0650 PF06827 Zinc finger found in FPG and IleRS ABAYE0650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABAYE0650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABAYE0651 PF02245 Methylpurine-DNA glycosylase (MPG) ABAYE0653 PF07715 TonB-dependent Receptor Plug Domain ABAYE0653 PF00593 TonB dependent receptor ABAYE0654 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE0657 PF13098 Thioredoxin-like domain ABAYE0657 PF10411 Disulfide bond isomerase protein N-terminus ABAYE0658 PF01571 Aminomethyltransferase folate-binding domain ABAYE0660 PF04343 Protein of unknown function, DUF488 ABAYE0661 PF08274 PhnA Zinc-Ribbon ABAYE0661 PF03831 PhnA domain ABAYE0662 PF07411 Domain of unknown function (DUF1508) ABAYE0663 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABAYE0663 PF04073 Aminoacyl-tRNA editing domain ABAYE0663 PF03129 Anticodon binding domain ABAYE0664 PF00873 AcrB/AcrD/AcrF family ABAYE0667 PF00072 Response regulator receiver domain ABAYE0668 PF00072 Response regulator receiver domain ABAYE0669 PF01584 CheW-like domain ABAYE0670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABAYE0670 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABAYE0671 PF01584 CheW-like domain ABAYE0671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0671 PF01627 Hpt domain ABAYE0671 PF00072 Response regulator receiver domain ABAYE0674 PF04055 Radical SAM superfamily ABAYE0674 PF06969 HemN C-terminal domain ABAYE0676 PF07687 Peptidase dimerisation domain ABAYE0676 PF01546 Peptidase family M20/M25/M40 ABAYE0677 PF08085 Entericidin EcnA/B family ABAYE0679 PF04304 Protein of unknown function (DUF454) ABAYE0680 PF17969 L,D-transpeptidase C-terminal domain ABAYE0680 PF03734 L,D-transpeptidase catalytic domain ABAYE0682 PF00258 Flavodoxin ABAYE0682 PF00667 FAD binding domain ABAYE0682 PF00175 Oxidoreductase NAD-binding domain ABAYE0684 PF12805 FUSC-like inner membrane protein yccS ABAYE0685 PF07690 Major Facilitator Superfamily ABAYE0686 PF00881 Nitroreductase family ABAYE0689 PF01235 Sodium:alanine symporter family ABAYE0690 PF01734 Patatin-like phospholipase ABAYE0691 PF13291 ACT domain ABAYE0691 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE0692 PF05992 SbmA/BacA-like family ABAYE0697 PF02934 GatB/GatE catalytic domain ABAYE0697 PF02637 GatB domain ABAYE0698 PF01425 Amidase ABAYE0699 PF02686 Glu-tRNAGln amidotransferase C subunit ABAYE0701 PF04085 rod shape-determining protein MreC ABAYE0703 PF04093 rod shape-determining protein MreD ABAYE0704 PF02545 Maf-like protein ABAYE0705 PF10150 Ribonuclease E/G family ABAYE0705 PF00575 S1 RNA binding domain ABAYE0708 PF06974 Protein of unknown function (DUF1298) ABAYE0708 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABAYE0709 PF01507 Phosphoadenosine phosphosulfate reductase family ABAYE0712 PF02525 Flavodoxin-like fold ABAYE0716 PF02673 Bacitracin resistance protein BacA ABAYE0717 PF06719 AraC-type transcriptional regulator N-terminus ABAYE0717 PF12833 Helix-turn-helix domain ABAYE0718 PF00109 Beta-ketoacyl synthase, N-terminal domain ABAYE0718 PF00550 Phosphopantetheine attachment site ABAYE0718 PF14765 Polyketide synthase dehydratase ABAYE0718 PF16197 Ketoacyl-synthetase C-terminal extension ABAYE0718 PF09277 Erythronolide synthase, docking ABAYE0718 PF08990 Erythronolide synthase docking ABAYE0718 PF08659 KR domain ABAYE0718 PF02801 Beta-ketoacyl synthase, C-terminal domain ABAYE0718 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE0718 PF00698 Acyl transferase domain ABAYE0719 PF01965 DJ-1/PfpI family ABAYE0720 PF00324 Amino acid permease ABAYE0721 PF04303 PrpF protein ABAYE0722 PF00348 Polyprenyl synthetase ABAYE0723 PF04237 YjbR ABAYE0724 PF01145 SPFH domain / Band 7 family ABAYE0726 PF01734 Patatin-like phospholipase ABAYE0731 PF08019 Phosphoethanolamine transferase EptA/EptB ABAYE0731 PF00884 Sulfatase ABAYE0732 PF00072 Response regulator receiver domain ABAYE0732 PF00486 Transcriptional regulatory protein, C terminal ABAYE0733 PF00512 His Kinase A (phospho-acceptor) domain ABAYE0733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE0733 PF08521 Two-component sensor kinase N-terminal ABAYE0735 PF00909 Ammonium Transporter Family ABAYE0736 PF03466 LysR substrate binding domain ABAYE0736 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0740 PF10458 Valyl tRNA synthetase tRNA binding arm ABAYE0740 PF00133 tRNA synthetases class I (I, L, M and V) ABAYE0740 PF08264 Anticodon-binding domain of tRNA ABAYE0744 PF01906 Putative heavy-metal-binding ABAYE0745 PF01906 Putative heavy-metal-binding ABAYE0746 PF02321 Outer membrane efflux protein ABAYE0747 PF00873 AcrB/AcrD/AcrF family ABAYE0748 PF00529 HlyD membrane-fusion protein of T1SS ABAYE0748 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE0749 PF01569 PAP2 superfamily ABAYE0751 PF00348 Polyprenyl synthetase ABAYE0753 PF00829 Ribosomal prokaryotic L21 protein ABAYE0754 PF01016 Ribosomal L27 protein ABAYE0755 PF03548 Outer membrane lipoprotein carrier protein LolA ABAYE0757 PF02403 Seryl-tRNA synthetase N-terminal domain ABAYE0757 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABAYE0758 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABAYE0758 PF10414 Sirohaem synthase dimerisation region ABAYE0758 PF14824 Sirohaem biosynthesis protein central ABAYE0759 PF00588 SpoU rRNA Methylase family ABAYE0760 PF01638 HxlR-like helix-turn-helix ABAYE0761 PF03358 NADPH-dependent FMN reductase ABAYE0762 PF13520 Amino acid permease ABAYE0763 PF00465 Iron-containing alcohol dehydrogenase ABAYE0765 PF03099 Biotin/lipoate A/B protein ligase family ABAYE0766 PF04359 Protein of unknown function (DUF493) ABAYE0767 PF04546 Sigma-70, non-essential region ABAYE0767 PF03979 Sigma-70 factor, region 1.1 ABAYE0767 PF04545 Sigma-70, region 4 ABAYE0767 PF04542 Sigma-70 region 2 ABAYE0767 PF04539 Sigma-70 region 3 ABAYE0767 PF00140 Sigma-70 factor, region 1.2 ABAYE0773 PF00285 Citrate synthase, C-terminal domain ABAYE0774 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABAYE0775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABAYE0776 PF02910 Fumarate reductase flavoprotein C-term ABAYE0776 PF00890 FAD binding domain ABAYE0777 PF13085 2Fe-2S iron-sulfur cluster binding domain ABAYE0780 PF02779 Transketolase, pyrimidine binding domain ABAYE0780 PF16078 2-oxoglutarate dehydrogenase N-terminus ABAYE0780 PF00676 Dehydrogenase E1 component ABAYE0780 PF16870 2-oxoglutarate dehydrogenase C-terminal ABAYE0781 PF02817 e3 binding domain ABAYE0781 PF00364 Biotin-requiring enzyme ABAYE0781 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABAYE0782 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE0782 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE0783 PF00549 CoA-ligase ABAYE0783 PF08442 ATP-grasp domain ABAYE0784 PF00549 CoA-ligase ABAYE0784 PF02629 CoA binding domain ABAYE0788 PF00579 tRNA synthetases class I (W and Y) ABAYE0789 PF05661 Protein of unknown function (DUF808) ABAYE0790 PF04228 Putative neutral zinc metallopeptidase ABAYE0791 PF00999 Sodium/hydrogen exchanger family ABAYE0794 PF09587 Bacterial capsule synthesis protein PGA_cap ABAYE0796 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABAYE0797 PF00582 Universal stress protein family ABAYE0798 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE0799 PF03449 Transcription elongation factor, N-terminal ABAYE0799 PF01272 Transcription elongation factor, GreA/GreB, C-term ABAYE0800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE0800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABAYE0800 PF02142 MGS-like domain ABAYE0801 PF00117 Glutamine amidotransferase class-I ABAYE0801 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABAYE0804 PF01985 CRS1 / YhbY (CRM) domain ABAYE0805 PF01728 FtsJ-like methyltransferase ABAYE0806 PF17862 AAA+ lid domain ABAYE0806 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE0806 PF01434 Peptidase family M41 ABAYE0806 PF06480 FtsH Extracellular ABAYE0807 PF00809 Pterin binding enzyme ABAYE0811 PF16655 PhoD-like phosphatase, N-terminal domain ABAYE0811 PF09423 PhoD-like phosphatase ABAYE0812 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABAYE0812 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABAYE0815 PF00083 Sugar (and other) transporter ABAYE0816 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABAYE0816 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABAYE0817 PF01266 FAD dependent oxidoreductase ABAYE0817 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABAYE0818 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABAYE0818 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABAYE0819 PF00781 Diacylglycerol kinase catalytic domain ABAYE0820 PF00149 Calcineurin-like phosphoesterase ABAYE0822 PF00166 Chaperonin 10 Kd subunit ABAYE0823 PF00118 TCP-1/cpn60 chaperonin family ABAYE0824 PF01219 Prokaryotic diacylglycerol kinase ABAYE0825 PF00753 Metallo-beta-lactamase superfamily ABAYE0826 PF03009 Glycerophosphoryl diester phosphodiesterase family ABAYE0827 PF00873 AcrB/AcrD/AcrF family ABAYE0829 PF01435 Peptidase family M48 ABAYE0831 PF01464 Transglycosylase SLT domain ABAYE0832 PF01171 PP-loop family ABAYE0834 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABAYE0834 PF01464 Transglycosylase SLT domain ABAYE0835 PF03449 Transcription elongation factor, N-terminal ABAYE0835 PF01272 Transcription elongation factor, GreA/GreB, C-term ABAYE0838 PF00975 Thioesterase domain ABAYE0838 PF00550 Phosphopantetheine attachment site ABAYE0838 PF00668 Condensation domain ABAYE0838 PF13193 AMP-binding enzyme C-terminal domain ABAYE0838 PF00501 AMP-binding enzyme ABAYE0846 PF00881 Nitroreductase family ABAYE0849 PF02595 Glycerate kinase family ABAYE0850 PF00384 Molybdopterin oxidoreductase ABAYE0851 PF02634 FdhD/NarQ family ABAYE0852 PF06803 Protein of unknown function (DUF1232) ABAYE0853 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABAYE0853 PF11890 Domain of unknown function (DUF3410) ABAYE0853 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABAYE0854 PF00152 tRNA synthetases class II (D, K and N) ABAYE0856 PF18073 Rubredoxin metal binding domain ABAYE0858 PF00324 Amino acid permease ABAYE0860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABAYE0860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABAYE0861 PF01678 Diaminopimelate epimerase ABAYE0862 PF00561 alpha/beta hydrolase fold ABAYE0863 PF01810 LysE type translocator ABAYE0864 PF00589 Phage integrase family ABAYE0864 PF02899 Phage integrase, N-terminal SAM-like domain ABAYE0865 PF01012 Electron transfer flavoprotein domain ABAYE0866 PF00766 Electron transfer flavoprotein FAD-binding domain ABAYE0866 PF01012 Electron transfer flavoprotein domain ABAYE0867 PF03989 DNA gyrase C-terminal domain, beta-propeller ABAYE0867 PF00521 DNA gyrase/topoisomerase IV, subunit A ABAYE0870 PF00535 Glycosyl transferase family 2 ABAYE0874 PF13533 Biotin-lipoyl like ABAYE0877 PF00266 Aminotransferase class-V ABAYE0880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABAYE0882 PF02687 FtsX-like permease family ABAYE0882 PF12704 MacB-like periplasmic core domain ABAYE0883 PF00005 ABC transporter ABAYE0884 PF00753 Metallo-beta-lactamase superfamily ABAYE0884 PF13567 Domain of unknown function (DUF4131) ABAYE0884 PF03772 Competence protein ABAYE0886 PF01343 Peptidase family S49 ABAYE0886 PF06965 Na+/H+ antiporter 1 ABAYE0887 PF12697 Alpha/beta hydrolase family ABAYE0888 PF00551 Formyl transferase ABAYE0889 PF02769 AIR synthase related protein, C-terminal domain ABAYE0889 PF00586 AIR synthase related protein, N-terminal domain ABAYE0890 PF01594 AI-2E family transporter ABAYE0891 PF11638 DnaA N-terminal domain ABAYE0891 PF00308 Bacterial dnaA protein ABAYE0891 PF08299 Bacterial dnaA protein helix-turn-helix ABAYE0898 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABAYE0898 PF00588 SpoU rRNA Methylase family ABAYE0899 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABAYE0901 PF00691 OmpA family ABAYE0902 PF04052 TolB amino-terminal domain ABAYE0902 PF07676 WD40-like Beta Propeller Repeat ABAYE0905 PF02472 Biopolymer transport protein ExbD/TolR ABAYE0906 PF01618 MotA/TolQ/ExbB proton channel family ABAYE0907 PF03061 Thioesterase superfamily ABAYE0908 PF07687 Peptidase dimerisation domain ABAYE0908 PF01546 Peptidase family M20/M25/M40 ABAYE0909 PF17864 RuvB AAA lid domain ABAYE0909 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABAYE0909 PF05491 RuvB C-terminal winged helix domain ABAYE0910 PF07499 RuvA, C-terminal domain ABAYE0910 PF01330 RuvA N terminal domain ABAYE0911 PF01966 HD domain ABAYE0912 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABAYE0912 PF02769 AIR synthase related protein, C-terminal domain ABAYE0912 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABAYE0913 PF07690 Major Facilitator Superfamily ABAYE0914 PF01784 NIF3 (NGG1p interacting factor 3) ABAYE0915 PF00378 Enoyl-CoA hydratase/isomerase ABAYE0916 PF01467 Cytidylyltransferase-like ABAYE0916 PF00293 NUDIX domain ABAYE0918 PF00578 AhpC/TSA family ABAYE0921 PF06508 Queuosine biosynthesis protein QueC ABAYE0923 PF14602 Hexapeptide repeat of succinyl-transferase ABAYE0923 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABAYE0923 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE0925 PF03466 LysR substrate binding domain ABAYE0925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0926 PF12857 TOBE-like domain ABAYE0926 PF00005 ABC transporter ABAYE0927 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE0928 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE0931 PF01063 Amino-transferase class IV ABAYE0932 PF02618 YceG-like family ABAYE0933 PF02223 Thymidylate kinase ABAYE0935 PF02910 Fumarate reductase flavoprotein C-term ABAYE0935 PF00890 FAD binding domain ABAYE0936 PF13180 PDZ domain ABAYE0938 PF06421 GTP-binding protein LepA C-terminus ABAYE0938 PF00009 Elongation factor Tu GTP binding domain ABAYE0938 PF00679 Elongation factor G C-terminus ABAYE0938 PF03144 Elongation factor Tu domain 2 ABAYE0939 PF10502 Signal peptidase, peptidase S26 ABAYE0941 PF14622 Ribonuclease-III-like ABAYE0941 PF00035 Double-stranded RNA binding motif ABAYE0942 PF01926 50S ribosome-binding GTPase ABAYE0942 PF07650 KH domain ABAYE0944 PF11967 Recombination protein O N terminal ABAYE0944 PF02565 Recombination protein O C terminal ABAYE0945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABAYE0946 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABAYE0947 PF00106 short chain dehydrogenase ABAYE0953 PF00990 Diguanylate cyclase, GGDEF domain ABAYE0953 PF17151 Periplasmic sensor domain ABAYE0955 PF17757 UvrB interaction domain ABAYE0955 PF02151 UvrB/uvrC motif ABAYE0955 PF04851 Type III restriction enzyme, res subunit ABAYE0955 PF12344 Ultra-violet resistance protein B ABAYE0955 PF00271 Helicase conserved C-terminal domain ABAYE0957 PF00892 EamA-like transporter family ABAYE0958 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABAYE0958 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABAYE0961 PF01018 GTP1/OBG ABAYE0961 PF01926 50S ribosome-binding GTPase ABAYE0962 PF01472 PUA domain ABAYE0962 PF00696 Amino acid kinase family ABAYE0964 PF07759 Protein of unknown function (DUF1615) ABAYE0965 PF01207 Dihydrouridine synthase (Dus) ABAYE0966 PF03060 Nitronate monooxygenase ABAYE0969 PF02350 UDP-N-acetylglucosamine 2-epimerase ABAYE0975 PF00875 DNA photolyase ABAYE0975 PF03441 FAD binding domain of DNA photolyase ABAYE0976 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE0977 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE0978 PF07943 Penicillin-binding protein 5, C-terminal domain ABAYE0978 PF00768 D-alanyl-D-alanine carboxypeptidase ABAYE0980 PF03971 Monomeric isocitrate dehydrogenase ABAYE0981 PF00849 RNA pseudouridylate synthase ABAYE0982 PF00180 Isocitrate/isopropylmalate dehydrogenase ABAYE0985 PF06779 Uncharacterised MFS-type transporter YbfB ABAYE0986 PF03466 LysR substrate binding domain ABAYE0986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE0989 PF02567 Phenazine biosynthesis-like protein ABAYE0990 PF05193 Peptidase M16 inactive domain ABAYE0990 PF00675 Insulinase (Peptidase family M16) ABAYE0995 PF01867 CRISPR associated protein Cas1 ABAYE0997 PF09611 CRISPR-associated protein (Cas_Csy1) ABAYE0998 PF09614 CRISPR-associated protein (Cas_Csy2) ABAYE0999 PF09615 CRISPR-associated protein (Cas_Csy3) ABAYE1010 PF02581 Thiamine monophosphate synthase ABAYE1011 PF00202 Aminotransferase class-III ABAYE1013 PF00849 RNA pseudouridylate synthase ABAYE1014 PF18337 RapA N-terminal Tudor like domain ABAYE1014 PF00271 Helicase conserved C-terminal domain ABAYE1014 PF12137 RNA polymerase recycling family C-terminal ABAYE1014 PF18339 RapA N-terminal Tudor like domain 1 ABAYE1014 PF00176 SNF2 family N-terminal domain ABAYE1016 PF00440 Bacterial regulatory proteins, tetR family ABAYE1017 PF00175 Oxidoreductase NAD-binding domain ABAYE1017 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE1017 PF00970 Oxidoreductase FAD-binding domain ABAYE1018 PF00487 Fatty acid desaturase ABAYE1023 PF17754 MftR C-terminal domain ABAYE1023 PF00440 Bacterial regulatory proteins, tetR family ABAYE1026 PF00202 Aminotransferase class-III ABAYE1027 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABAYE1028 PF00171 Aldehyde dehydrogenase family ABAYE1029 PF01037 Lrp/AsnC ligand binding domain ABAYE1030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABAYE1030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABAYE1030 PF00205 Thiamine pyrophosphate enzyme, central domain ABAYE1031 PF00324 Amino acid permease ABAYE1032 PF12849 PBP superfamily domain ABAYE1033 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1034 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1035 PF00005 ABC transporter ABAYE1036 PF01343 Peptidase family S49 ABAYE1036 PF08496 Peptidase family S49 N-terminal ABAYE1039 PF00206 Lyase ABAYE1039 PF08328 Adenylosuccinate lyase C-terminal ABAYE1040 PF04356 Protein of unknown function (DUF489) ABAYE1042 PF13344 Haloacid dehalogenase-like hydrolase ABAYE1042 PF00293 NUDIX domain ABAYE1043 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE1044 PF07943 Penicillin-binding protein 5, C-terminal domain ABAYE1044 PF00768 D-alanyl-D-alanine carboxypeptidase ABAYE1047 PF01975 Survival protein SurE ABAYE1048 PF01551 Peptidase family M23 ABAYE1048 PF01476 LysM domain ABAYE1049 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1049 PF03466 LysR substrate binding domain ABAYE1050 PF13654 AAA domain ABAYE1050 PF05362 Lon protease (S16) C-terminal proteolytic domain ABAYE1051 PF07690 Major Facilitator Superfamily ABAYE1052 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABAYE1053 PF13593 SBF-like CPA transporter family (DUF4137) ABAYE1054 PF01197 Ribosomal protein L31 ABAYE1055 PF12792 CSS motif domain associated with EAL ABAYE1055 PF00563 EAL domain ABAYE1057 PF04055 Radical SAM superfamily ABAYE1058 PF01132 Elongation factor P (EF-P) OB domain ABAYE1058 PF09285 Elongation factor P, C-terminal ABAYE1058 PF08207 Elongation factor P (EF-P) KOW-like domain ABAYE1059 PF02554 Carbon starvation protein CstA ABAYE1059 PF13722 5TM C-terminal transporter carbon starvation CstA ABAYE1060 PF04328 Selenoprotein, putative ABAYE1061 PF03466 LysR substrate binding domain ABAYE1061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1062 PF00557 Metallopeptidase family M24 ABAYE1063 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE1064 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE1065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABAYE1065 PF00355 Rieske [2Fe-2S] domain ABAYE1067 PF18113 Rubredoxin binding C-terminal domain ABAYE1067 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1068 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABAYE1068 PF01266 FAD dependent oxidoreductase ABAYE1072 PF00892 EamA-like transporter family ABAYE1074 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABAYE1082 PF17954 Quercetinase C-terminal cupin domain ABAYE1082 PF02678 Pirin ABAYE1083 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE1084 PF13309 HTH domain ABAYE1084 PF08348 YheO-like PAS domain ABAYE1086 PF13193 AMP-binding enzyme C-terminal domain ABAYE1086 PF00668 Condensation domain ABAYE1086 PF00550 Phosphopantetheine attachment site ABAYE1086 PF00501 AMP-binding enzyme ABAYE1087 PF00501 AMP-binding enzyme ABAYE1087 PF13193 AMP-binding enzyme C-terminal domain ABAYE1087 PF00668 Condensation domain ABAYE1087 PF00975 Thioesterase domain ABAYE1087 PF00550 Phosphopantetheine attachment site ABAYE1089 PF01032 FecCD transport family ABAYE1090 PF01032 FecCD transport family ABAYE1091 PF00005 ABC transporter ABAYE1092 PF01497 Periplasmic binding protein ABAYE1093 PF00593 TonB dependent receptor ABAYE1093 PF07715 TonB-dependent Receptor Plug Domain ABAYE1094 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABAYE1095 PF00668 Condensation domain ABAYE1095 PF00501 AMP-binding enzyme ABAYE1095 PF00550 Phosphopantetheine attachment site ABAYE1096 PF00501 AMP-binding enzyme ABAYE1096 PF13193 AMP-binding enzyme C-terminal domain ABAYE1097 PF00550 Phosphopantetheine attachment site ABAYE1097 PF00857 Isochorismatase family ABAYE1098 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABAYE1100 PF00005 ABC transporter ABAYE1100 PF00664 ABC transporter transmembrane region ABAYE1101 PF00005 ABC transporter ABAYE1101 PF00664 ABC transporter transmembrane region ABAYE1102 PF00975 Thioesterase domain ABAYE1104 PF00425 chorismate binding enzyme ABAYE1106 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABAYE1107 PF05675 Protein of unknown function (DUF817) ABAYE1110 PF00144 Beta-lactamase ABAYE1114 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE1114 PF01799 [2Fe-2S] binding domain ABAYE1115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABAYE1115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABAYE1118 PF00218 Indole-3-glycerol phosphate synthase ABAYE1119 PF00591 Glycosyl transferase family, a/b domain ABAYE1119 PF02885 Glycosyl transferase family, helical bundle domain ABAYE1121 PF07715 TonB-dependent Receptor Plug Domain ABAYE1121 PF00593 TonB dependent receptor ABAYE1122 PF11838 ERAP1-like C-terminal domain ABAYE1122 PF01433 Peptidase family M1 domain ABAYE1123 PF00117 Glutamine amidotransferase class-I ABAYE1125 PF00854 POT family ABAYE1127 PF04345 Chorismate lyase ABAYE1128 PF01040 UbiA prenyltransferase family ABAYE1134 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABAYE1134 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABAYE1135 PF01784 NIF3 (NGG1p interacting factor 3) ABAYE1136 PF13180 PDZ domain ABAYE1137 PF01743 Poly A polymerase head domain ABAYE1137 PF12627 Probable RNA and SrmB- binding site of polymerase A ABAYE1138 PF01515 Phosphate acetyl/butaryl transferase ABAYE1138 PF03949 Malic enzyme, NAD binding domain ABAYE1138 PF00390 Malic enzyme, N-terminal domain ABAYE1139 PF00563 EAL domain ABAYE1139 PF00990 Diguanylate cyclase, GGDEF domain ABAYE1139 PF03707 Bacterial signalling protein N terminal repeat ABAYE1140 PF04452 RNA methyltransferase ABAYE1141 PF02219 Methylenetetrahydrofolate reductase ABAYE1142 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABAYE1142 PF05221 S-adenosyl-L-homocysteine hydrolase ABAYE1145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE1145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE1145 PF09317 Domain of unknown function (DUF1974) ABAYE1146 PF04055 Radical SAM superfamily ABAYE1147 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1147 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE1150 PF07690 Major Facilitator Superfamily ABAYE1152 PF00557 Metallopeptidase family M24 ABAYE1153 PF00318 Ribosomal protein S2 ABAYE1154 PF00889 Elongation factor TS ABAYE1156 PF12833 Helix-turn-helix domain ABAYE1160 PF03330 Lytic transglycolase ABAYE1160 PF05036 Sporulation related domain ABAYE1161 PF13406 Transglycosylase SLT domain ABAYE1162 PF01098 Cell cycle protein ABAYE1164 PF14489 QueF-like protein ABAYE1164 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABAYE1165 PF01061 ABC-2 type transporter ABAYE1166 PF00005 ABC transporter ABAYE1171 PF00464 Serine hydroxymethyltransferase ABAYE1172 PF02321 Outer membrane efflux protein ABAYE1173 PF00873 AcrB/AcrD/AcrF family ABAYE1174 PF13533 Biotin-lipoyl like ABAYE1176 PF03466 LysR substrate binding domain ABAYE1176 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1177 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABAYE1178 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1179 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1180 PF00005 ABC transporter ABAYE1181 PF00893 Small Multidrug Resistance protein ABAYE1182 PF00037 4Fe-4S binding domain ABAYE1184 PF00392 Bacterial regulatory proteins, gntR family ABAYE1184 PF00155 Aminotransferase class I and II ABAYE1185 PF02567 Phenazine biosynthesis-like protein ABAYE1186 PF00970 Oxidoreductase FAD-binding domain ABAYE1186 PF00175 Oxidoreductase NAD-binding domain ABAYE1191 PF00437 Type II/IV secretion system protein ABAYE1193 PF00072 Response regulator receiver domain ABAYE1193 PF00486 Transcriptional regulatory protein, C terminal ABAYE1194 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1194 PF08521 Two-component sensor kinase N-terminal ABAYE1194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1196 PF00293 NUDIX domain ABAYE1198 PF00905 Penicillin binding protein transpeptidase domain ABAYE1198 PF14814 Bifunctional transglycosylase second domain ABAYE1198 PF00912 Transglycosylase ABAYE1199 PF01513 ATP-NAD kinase ABAYE1200 PF07023 Protein of unknown function (DUF1315) ABAYE1201 PF00591 Glycosyl transferase family, a/b domain ABAYE1201 PF02885 Glycosyl transferase family, helical bundle domain ABAYE1202 PF00375 Sodium:dicarboxylate symporter family ABAYE1204 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE1204 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE1204 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE1205 PF00756 Putative esterase ABAYE1206 PF00800 Prephenate dehydratase ABAYE1206 PF01817 Chorismate mutase type II ABAYE1206 PF01842 ACT domain ABAYE1207 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABAYE1209 PF07687 Peptidase dimerisation domain ABAYE1209 PF01546 Peptidase family M20/M25/M40 ABAYE1210 PF00753 Metallo-beta-lactamase superfamily ABAYE1212 PF03883 Peroxide stress protein YaaA ABAYE1214 PF05690 Thiazole biosynthesis protein ThiG ABAYE1216 PF04241 Protein of unknown function (DUF423) ABAYE1217 PF04545 Sigma-70, region 4 ABAYE1217 PF04542 Sigma-70 region 2 ABAYE1217 PF00140 Sigma-70 factor, region 1.2 ABAYE1219 PF00313 'Cold-shock' DNA-binding domain ABAYE1220 PF00270 DEAD/DEAH box helicase ABAYE1220 PF00271 Helicase conserved C-terminal domain ABAYE1222 PF00881 Nitroreductase family ABAYE1223 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABAYE1223 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABAYE1225 PF00589 Phage integrase family ABAYE1236 PF01381 Helix-turn-helix ABAYE1236 PF00717 Peptidase S24-like ABAYE1240 PF01695 IstB-like ATP binding protein ABAYE1263 PF00583 Acetyltransferase (GNAT) family ABAYE1278 PF01180 Dihydroorotate dehydrogenase ABAYE1280 PF00156 Phosphoribosyl transferase domain ABAYE1283 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABAYE1283 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABAYE1284 PF01435 Peptidase family M48 ABAYE1285 PF09424 Yqey-like protein ABAYE1286 PF01165 Ribosomal protein S21 ABAYE1288 PF00814 Glycoprotease family ABAYE1292 PF00069 Protein kinase domain ABAYE1294 PF03466 LysR substrate binding domain ABAYE1294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1295 PF00202 Aminotransferase class-III ABAYE1296 PF00171 Aldehyde dehydrogenase family ABAYE1297 PF00324 Amino acid permease ABAYE1301 PF05401 Nodulation protein S (NodS) ABAYE1303 PF04076 Bacterial OB fold (BOF) protein ABAYE1308 PF00561 alpha/beta hydrolase fold ABAYE1309 PF03616 Sodium/glutamate symporter ABAYE1311 PF03466 LysR substrate binding domain ABAYE1311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1312 PF00248 Aldo/keto reductase family ABAYE1313 PF00106 short chain dehydrogenase ABAYE1316 PF07729 FCD domain ABAYE1316 PF00392 Bacterial regulatory proteins, gntR family ABAYE1328 PF00083 Sugar (and other) transporter ABAYE1328 PF08946 Osmosensory transporter coiled coil ABAYE1335 PF04403 Paraquat-inducible protein A ABAYE1336 PF02470 MlaD protein ABAYE1338 PF00576 HIUase/Transthyretin family ABAYE1340 PF00072 Response regulator receiver domain ABAYE1340 PF00486 Transcriptional regulatory protein, C terminal ABAYE1341 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1341 PF00672 HAMP domain ABAYE1349 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1349 PF08521 Two-component sensor kinase N-terminal ABAYE1350 PF00072 Response regulator receiver domain ABAYE1350 PF00486 Transcriptional regulatory protein, C terminal ABAYE1354 PF01177 Asp/Glu/Hydantoin racemase ABAYE1355 PF00892 EamA-like transporter family ABAYE1356 PF07995 Glucose / Sorbosone dehydrogenase ABAYE1360 PF00375 Sodium:dicarboxylate symporter family ABAYE1362 PF00753 Metallo-beta-lactamase superfamily ABAYE1362 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABAYE1363 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1364 PF00005 ABC transporter ABAYE1364 PF09383 NIL domain ABAYE1365 PF03180 NLPA lipoprotein ABAYE1366 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABAYE1366 PF02843 Phosphoribosylglycinamide synthetase, C domain ABAYE1366 PF02844 Phosphoribosylglycinamide synthetase, N domain ABAYE1367 PF01808 AICARFT/IMPCHase bienzyme ABAYE1367 PF02142 MGS-like domain ABAYE1368 PF02954 Bacterial regulatory protein, Fis family ABAYE1373 PF13932 GidA associated domain ABAYE1373 PF01134 Glucose inhibited division protein A ABAYE1376 PF14403 Circularly permuted ATP-grasp type 2 ABAYE1378 PF01841 Transglutaminase-like superfamily ABAYE1378 PF08379 Bacterial transglutaminase-like N-terminal region ABAYE1380 PF00842 Alanine racemase, C-terminal domain ABAYE1380 PF01168 Alanine racemase, N-terminal domain ABAYE1381 PF03796 DnaB-like helicase C terminal domain ABAYE1381 PF00772 DnaB-like helicase N terminal domain ABAYE1382 PF01281 Ribosomal protein L9, N-terminal domain ABAYE1382 PF03948 Ribosomal protein L9, C-terminal domain ABAYE1383 PF01084 Ribosomal protein S18 ABAYE1384 PF01250 Ribosomal protein S6 ABAYE1385 PF01040 UbiA prenyltransferase family ABAYE1386 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABAYE1387 PF00510 Cytochrome c oxidase subunit III ABAYE1388 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABAYE1389 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABAYE1389 PF06481 COX Aromatic Rich Motif ABAYE1391 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABAYE1391 PF02896 PEP-utilising enzyme, TIM barrel domain ABAYE1391 PF00391 PEP-utilising enzyme, mobile domain ABAYE1392 PF03618 Kinase/pyrophosphorylase ABAYE1395 PF01522 Polysaccharide deacetylase ABAYE1395 PF14883 Hypothetical glycosyl hydrolase family 13 ABAYE1396 PF00535 Glycosyl transferase family 2 ABAYE1397 PF13994 PgaD-like protein ABAYE1399 PF00296 Luciferase-like monooxygenase ABAYE1404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1404 PF03466 LysR substrate binding domain ABAYE1406 PF00472 RF-1 domain ABAYE1406 PF03462 PCRF domain ABAYE1407 PF13847 Methyltransferase domain ABAYE1407 PF17827 PrmC N-terminal domain ABAYE1408 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1409 PF09084 NMT1/THI5 like ABAYE1410 PF12833 Helix-turn-helix domain ABAYE1411 PF00106 short chain dehydrogenase ABAYE1412 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE1412 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE1412 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE1413 PF13193 AMP-binding enzyme C-terminal domain ABAYE1413 PF00501 AMP-binding enzyme ABAYE1414 PF01613 Flavin reductase like domain ABAYE1415 PF00899 ThiF family ABAYE1416 PF03109 ABC1 family ABAYE1420 PF03814 Potassium-transporting ATPase A subunit ABAYE1422 PF02669 K+-transporting ATPase, c chain ABAYE1423 PF13493 Domain of unknown function (DUF4118) ABAYE1423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1423 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1423 PF02702 Osmosensitive K+ channel His kinase sensor domain ABAYE1424 PF00486 Transcriptional regulatory protein, C terminal ABAYE1424 PF00072 Response regulator receiver domain ABAYE1425 PF00120 Glutamine synthetase, catalytic domain ABAYE1427 PF03232 Ubiquinone biosynthesis protein COQ7 ABAYE1428 PF07690 Major Facilitator Superfamily ABAYE1429 PF01103 Surface antigen ABAYE1429 PF07244 Surface antigen variable number repeat ABAYE1429 PF17243 POTRA domain TamA domain 1 ABAYE1432 PF00330 Aconitase family (aconitate hydratase) ABAYE1432 PF06434 Aconitate hydratase 2 N-terminus ABAYE1432 PF11791 Aconitate B N-terminal domain ABAYE1434 PF00027 Cyclic nucleotide-binding domain ABAYE1434 PF00520 Ion transport protein ABAYE1435 PF07690 Major Facilitator Superfamily ABAYE1439 PF03466 LysR substrate binding domain ABAYE1439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1440 PF04284 Protein of unknown function (DUF441) ABAYE1442 PF00849 RNA pseudouridylate synthase ABAYE1442 PF01479 S4 domain ABAYE1445 PF00849 RNA pseudouridylate synthase ABAYE1445 PF01479 S4 domain ABAYE1446 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABAYE1447 PF01119 DNA mismatch repair protein, C-terminal domain ABAYE1447 PF08676 MutL C terminal dimerisation domain ABAYE1449 PF17209 Hfq protein ABAYE1451 PF00881 Nitroreductase family ABAYE1453 PF00149 Calcineurin-like phosphoesterase ABAYE1454 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABAYE1455 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABAYE1455 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABAYE1456 PF02540 NAD synthase ABAYE1456 PF00117 Glutamine amidotransferase class-I ABAYE1456 PF00958 GMP synthase C terminal domain ABAYE1457 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABAYE1458 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABAYE1459 PF13520 Amino acid permease ABAYE1460 PF00171 Aldehyde dehydrogenase family ABAYE1463 PF00465 Iron-containing alcohol dehydrogenase ABAYE1464 PF05970 PIF1-like helicase ABAYE1464 PF14493 Helix-turn-helix domain ABAYE1466 PF02110 Hydroxyethylthiazole kinase family ABAYE1469 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABAYE1469 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABAYE1469 PF01433 Peptidase family M1 domain ABAYE1472 PF13953 PapC C-terminal domain ABAYE1472 PF00577 Outer membrane usher protein ABAYE1472 PF13954 PapC N-terminal domain ABAYE1477 PF01817 Chorismate mutase type II ABAYE1478 PF01037 Lrp/AsnC ligand binding domain ABAYE1482 PF02224 Cytidylate kinase ABAYE1485 PF00440 Bacterial regulatory proteins, tetR family ABAYE1486 PF00593 TonB dependent receptor ABAYE1486 PF07715 TonB-dependent Receptor Plug Domain ABAYE1487 PF00924 Mechanosensitive ion channel ABAYE1494 PF00593 TonB dependent receptor ABAYE1494 PF07715 TonB-dependent Receptor Plug Domain ABAYE1499 PF12848 ABC transporter ABAYE1499 PF00005 ABC transporter ABAYE1500 PF00582 Universal stress protein family ABAYE1505 PF00689 Cation transporting ATPase, C-terminus ABAYE1505 PF00690 Cation transporter/ATPase, N-terminus ABAYE1506 PF02308 MgtC family ABAYE1507 PF03594 Benzoate membrane transport protein ABAYE1508 PF01037 Lrp/AsnC ligand binding domain ABAYE1509 PF01810 LysE type translocator ABAYE1511 PF03466 LysR substrate binding domain ABAYE1511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1513 PF02803 Thiolase, C-terminal domain ABAYE1513 PF00108 Thiolase, N-terminal domain ABAYE1518 PF07690 Major Facilitator Superfamily ABAYE1519 PF12170 DNA polymerase III tau subunit V interacting with alpha ABAYE1519 PF12169 DNA polymerase III subunits gamma and tau domain III ABAYE1519 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABAYE1520 PF04185 Phosphoesterase family ABAYE1520 PF05506 Domain of unknown function (DUF756) ABAYE1521 PF03061 Thioesterase superfamily ABAYE1522 PF00465 Iron-containing alcohol dehydrogenase ABAYE1525 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABAYE1526 PF01565 FAD binding domain ABAYE1526 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABAYE1529 PF01645 Conserved region in glutamate synthase ABAYE1535 PF12832 MFS_1 like family ABAYE1537 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE1537 PF00289 Biotin carboxylase, N-terminal domain ABAYE1537 PF02785 Biotin carboxylase C-terminal domain ABAYE1538 PF00364 Biotin-requiring enzyme ABAYE1539 PF01220 Dehydroquinase class II ABAYE1540 PF13438 Domain of unknown function (DUF4113) ABAYE1540 PF11799 impB/mucB/samB family C-terminal domain ABAYE1540 PF00817 impB/mucB/samB family ABAYE1541 PF00005 ABC transporter ABAYE1542 PF00072 Response regulator receiver domain ABAYE1542 PF00486 Transcriptional regulatory protein, C terminal ABAYE1544 PF04324 BFD-like [2Fe-2S] binding domain ABAYE1544 PF13806 Rieske-like [2Fe-2S] domain ABAYE1544 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABAYE1544 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABAYE1544 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABAYE1544 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1545 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABAYE1545 PF04324 BFD-like [2Fe-2S] binding domain ABAYE1545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABAYE1545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABAYE1545 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1546 PF01568 Molydopterin dinucleotide binding domain ABAYE1546 PF04324 BFD-like [2Fe-2S] binding domain ABAYE1546 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABAYE1546 PF00384 Molybdopterin oxidoreductase ABAYE1547 PF12804 MobA-like NTP transferase domain ABAYE1548 PF01568 Molydopterin dinucleotide binding domain ABAYE1548 PF00384 Molybdopterin oxidoreductase ABAYE1548 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABAYE1549 PF06463 Molybdenum Cofactor Synthesis C ABAYE1549 PF04055 Radical SAM superfamily ABAYE1551 PF02391 MoaE protein ABAYE1552 PF01967 MoaC family ABAYE1552 PF00994 Probable molybdopterin binding domain ABAYE1553 PF03454 MoeA C-terminal region (domain IV) ABAYE1553 PF00994 Probable molybdopterin binding domain ABAYE1553 PF03453 MoeA N-terminal region (domain I and II) ABAYE1554 PF01638 HxlR-like helix-turn-helix ABAYE1555 PF00392 Bacterial regulatory proteins, gntR family ABAYE1555 PF00155 Aminotransferase class I and II ABAYE1557 PF00892 EamA-like transporter family ABAYE1561 PF02635 DsrE/DsrF-like family ABAYE1562 PF16363 GDP-mannose 4,6 dehydratase ABAYE1563 PF00206 Lyase ABAYE1563 PF10415 Fumarase C C-terminus ABAYE1567 PF01266 FAD dependent oxidoreductase ABAYE1569 PF02542 YgbB family ABAYE1571 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABAYE1571 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABAYE1572 PF00440 Bacterial regulatory proteins, tetR family ABAYE1573 PF02954 Bacterial regulatory protein, Fis family ABAYE1573 PF00072 Response regulator receiver domain ABAYE1573 PF00158 Sigma-54 interaction domain ABAYE1574 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1574 PF00989 PAS fold ABAYE1574 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1576 PF04055 Radical SAM superfamily ABAYE1576 PF18693 TRAM domain ABAYE1576 PF00919 Uncharacterized protein family UPF0004 ABAYE1577 PF00696 Amino acid kinase family ABAYE1578 PF01765 Ribosome recycling factor ABAYE1579 PF01255 Putative undecaprenyl diphosphate synthase ABAYE1581 PF13288 DXP reductoisomerase C-terminal domain ABAYE1581 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABAYE1581 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABAYE1582 PF17820 PDZ domain ABAYE1582 PF02163 Peptidase family M50 ABAYE1582 PF13180 PDZ domain ABAYE1583 PF01103 Surface antigen ABAYE1583 PF07244 Surface antigen variable number repeat ABAYE1585 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABAYE1585 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE1586 PF07977 FabA-like domain ABAYE1587 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABAYE1587 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE1589 PF02631 RecX family ABAYE1590 PF00154 recA bacterial DNA recombination protein ABAYE1591 PF01479 S4 domain ABAYE1592 PF13419 Haloacid dehalogenase-like hydrolase ABAYE1598 PF01037 Lrp/AsnC ligand binding domain ABAYE1599 PF00266 Aminotransferase class-V ABAYE1600 PF00324 Amino acid permease ABAYE1602 PF05922 Peptidase inhibitor I9 ABAYE1602 PF00082 Subtilase family ABAYE1603 PF01740 STAS domain ABAYE1603 PF00916 Sulfate permease family ABAYE1604 PF02586 SOS response associated peptidase (SRAP) ABAYE1605 PF07995 Glucose / Sorbosone dehydrogenase ABAYE1607 PF00990 Diguanylate cyclase, GGDEF domain ABAYE1607 PF03707 Bacterial signalling protein N terminal repeat ABAYE1607 PF00563 EAL domain ABAYE1612 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABAYE1612 PF02378 Phosphotransferase system, EIIC ABAYE1613 PF00294 pfkB family carbohydrate kinase ABAYE1614 PF05524 PEP-utilising enzyme, N-terminal ABAYE1614 PF00381 PTS HPr component phosphorylation site ABAYE1614 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABAYE1614 PF02896 PEP-utilising enzyme, TIM barrel domain ABAYE1614 PF00391 PEP-utilising enzyme, mobile domain ABAYE1619 PF05525 Branched-chain amino acid transport protein ABAYE1621 PF00557 Metallopeptidase family M24 ABAYE1622 PF03466 LysR substrate binding domain ABAYE1622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1624 PF00462 Glutaredoxin ABAYE1625 PF00202 Aminotransferase class-III ABAYE1626 PF00478 IMP dehydrogenase / GMP reductase domain ABAYE1626 PF00571 CBS domain ABAYE1631 PF02881 SRP54-type protein, helical bundle domain ABAYE1631 PF00448 SRP54-type protein, GTPase domain ABAYE1634 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABAYE1636 PF02322 Cytochrome bd terminal oxidase subunit II ABAYE1637 PF01654 Cytochrome bd terminal oxidase subunit I ABAYE1641 PF07290 Protein of unknown function (DUF1449) ABAYE1643 PF00294 pfkB family carbohydrate kinase ABAYE1644 PF07715 TonB-dependent Receptor Plug Domain ABAYE1644 PF00593 TonB dependent receptor ABAYE1645 PF05193 Peptidase M16 inactive domain ABAYE1645 PF00675 Insulinase (Peptidase family M16) ABAYE1645 PF08367 Peptidase M16C associated ABAYE1646 PF02253 Phospholipase A1 ABAYE1647 PF02386 Cation transport protein ABAYE1648 PF02080 TrkA-C domain ABAYE1648 PF02254 TrkA-N domain ABAYE1649 PF00585 C-terminal regulatory domain of Threonine dehydratase ABAYE1649 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE1650 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABAYE1653 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABAYE1653 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABAYE1655 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABAYE1656 PF17871 AAA lid domain ABAYE1656 PF07724 AAA domain (Cdc48 subfamily) ABAYE1656 PF02861 Clp amino terminal domain, pathogenicity island component ABAYE1656 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE1656 PF10431 C-terminal, D2-small domain, of ClpB protein ABAYE1657 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABAYE1658 PF00793 DAHP synthetase I family ABAYE1661 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1661 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE1667 PF06418 CTP synthase N-terminus ABAYE1667 PF00117 Glutamine amidotransferase class-I ABAYE1668 PF00793 DAHP synthetase I family ABAYE1669 PF00113 Enolase, C-terminal TIM barrel domain ABAYE1669 PF03952 Enolase, N-terminal domain ABAYE1670 PF04239 Protein of unknown function (DUF421) ABAYE1671 PF04977 Septum formation initiator ABAYE1672 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABAYE1673 PF01144 Coenzyme A transferase ABAYE1674 PF01144 Coenzyme A transferase ABAYE1675 PF02803 Thiolase, C-terminal domain ABAYE1675 PF00108 Thiolase, N-terminal domain ABAYE1676 PF10397 Adenylosuccinate lyase C-terminus ABAYE1676 PF00206 Lyase ABAYE1677 PF00561 alpha/beta hydrolase fold ABAYE1678 PF07690 Major Facilitator Superfamily ABAYE1679 PF02627 Carboxymuconolactone decarboxylase family ABAYE1680 PF00775 Dioxygenase ABAYE1680 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABAYE1681 PF00775 Dioxygenase ABAYE1682 PF01487 Type I 3-dehydroquinase ABAYE1683 PF05048 Periplasmic copper-binding protein (NosD) ABAYE1684 PF04966 Carbohydrate-selective porin, OprB family ABAYE1685 PF01011 PQQ enzyme repeat ABAYE1685 PF13360 PQQ-like domain ABAYE1687 PF04143 Sulphur transport ABAYE1689 PF00753 Metallo-beta-lactamase superfamily ABAYE1690 PF09339 IclR helix-turn-helix domain ABAYE1690 PF01614 Bacterial transcriptional regulator ABAYE1691 PF03466 LysR substrate binding domain ABAYE1691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1692 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE1692 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE1692 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE1695 PF00106 short chain dehydrogenase ABAYE1697 PF07690 Major Facilitator Superfamily ABAYE1700 PF01425 Amidase ABAYE1701 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABAYE1704 PF00355 Rieske [2Fe-2S] domain ABAYE1704 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABAYE1707 PF00175 Oxidoreductase NAD-binding domain ABAYE1707 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE1708 PF01613 Flavin reductase like domain ABAYE1709 PF12833 Helix-turn-helix domain ABAYE1709 PF02311 AraC-like ligand binding domain ABAYE1710 PF07833 Copper amine oxidase N-terminal domain ABAYE1710 PF02728 Copper amine oxidase, N3 domain ABAYE1710 PF01179 Copper amine oxidase, enzyme domain ABAYE1710 PF02727 Copper amine oxidase, N2 domain ABAYE1712 PF00171 Aldehyde dehydrogenase family ABAYE1713 PF01804 Penicillin amidase ABAYE1714 PF12146 Serine aminopeptidase, S33 ABAYE1715 PF00108 Thiolase, N-terminal domain ABAYE1715 PF02803 Thiolase, C-terminal domain ABAYE1716 PF01144 Coenzyme A transferase ABAYE1717 PF01144 Coenzyme A transferase ABAYE1718 PF04444 Catechol dioxygenase N terminus ABAYE1718 PF00775 Dioxygenase ABAYE1719 PF02426 Muconolactone delta-isomerase ABAYE1720 PF13378 Enolase C-terminal domain-like ABAYE1720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABAYE1721 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1721 PF03466 LysR substrate binding domain ABAYE1723 PF00392 Bacterial regulatory proteins, gntR family ABAYE1723 PF07729 FCD domain ABAYE1724 PF00920 Dehydratase family ABAYE1725 PF07690 Major Facilitator Superfamily ABAYE1728 PF00171 Aldehyde dehydrogenase family ABAYE1730 PF00561 alpha/beta hydrolase fold ABAYE1731 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1731 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE1732 PF00106 short chain dehydrogenase ABAYE1734 PF00376 MerR family regulatory protein ABAYE1734 PF09278 MerR, DNA binding ABAYE1736 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1738 PF12706 Beta-lactamase superfamily domain ABAYE1739 PF08359 YsiA-like protein, C-terminal region ABAYE1739 PF00440 Bacterial regulatory proteins, tetR family ABAYE1740 PF12833 Helix-turn-helix domain ABAYE1740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABAYE1742 PF06314 Acetoacetate decarboxylase (ADC) ABAYE1744 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE1746 PF07995 Glucose / Sorbosone dehydrogenase ABAYE1749 PF00857 Isochorismatase family ABAYE1750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1750 PF03466 LysR substrate binding domain ABAYE1751 PF07995 Glucose / Sorbosone dehydrogenase ABAYE1752 PF00999 Sodium/hydrogen exchanger family ABAYE1752 PF02254 TrkA-N domain ABAYE1754 PF07687 Peptidase dimerisation domain ABAYE1754 PF01546 Peptidase family M20/M25/M40 ABAYE1768 PF07690 Major Facilitator Superfamily ABAYE1769 PF04909 Amidohydrolase ABAYE1772 PF08450 SMP-30/Gluconolactonase/LRE-like region ABAYE1774 PF03466 LysR substrate binding domain ABAYE1774 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1777 PF00529 HlyD membrane-fusion protein of T1SS ABAYE1777 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE1780 PF00171 Aldehyde dehydrogenase family ABAYE1781 PF00920 Dehydratase family ABAYE1783 PF03466 LysR substrate binding domain ABAYE1783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1784 PF01370 NAD dependent epimerase/dehydratase family ABAYE1785 PF07690 Major Facilitator Superfamily ABAYE1786 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABAYE1786 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABAYE1789 PF14572 Phosphoribosyl synthetase-associated domain ABAYE1789 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABAYE1790 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABAYE1794 PF00196 Bacterial regulatory proteins, luxR family ABAYE1794 PF03472 Autoinducer binding domain ABAYE1795 PF01425 Amidase ABAYE1796 PF13533 Biotin-lipoyl like ABAYE1797 PF07690 Major Facilitator Superfamily ABAYE1802 PF01975 Survival protein SurE ABAYE1804 PF04607 Region found in RelA / SpoT proteins ABAYE1804 PF02824 TGS domain ABAYE1804 PF13291 ACT domain ABAYE1805 PF00271 Helicase conserved C-terminal domain ABAYE1805 PF04851 Type III restriction enzyme, res subunit ABAYE1805 PF02151 UvrB/uvrC motif ABAYE1805 PF12344 Ultra-violet resistance protein B ABAYE1805 PF17757 UvrB interaction domain ABAYE1811 PF13673 Acetyltransferase (GNAT) domain ABAYE1812 PF12146 Serine aminopeptidase, S33 ABAYE1813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1813 PF03466 LysR substrate binding domain ABAYE1816 PF12146 Serine aminopeptidase, S33 ABAYE1817 PF02311 AraC-like ligand binding domain ABAYE1817 PF12833 Helix-turn-helix domain ABAYE1819 PF00512 His Kinase A (phospho-acceptor) domain ABAYE1819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE1819 PF16527 Two-component sensor protein CpxA, periplasmic domain ABAYE1819 PF00672 HAMP domain ABAYE1820 PF00072 Response regulator receiver domain ABAYE1820 PF00486 Transcriptional regulatory protein, C terminal ABAYE1821 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE1821 PF00529 HlyD membrane-fusion protein of T1SS ABAYE1822 PF00873 AcrB/AcrD/AcrF family ABAYE1823 PF02321 Outer membrane efflux protein ABAYE1824 PF12146 Serine aminopeptidase, S33 ABAYE1825 PF00743 Flavin-binding monooxygenase-like ABAYE1827 PF01266 FAD dependent oxidoreductase ABAYE1856 PF16970 Type-1 fimbrial protein, A ABAYE1857 PF02753 Pili assembly chaperone PapD, C-terminal domain ABAYE1857 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABAYE1858 PF13953 PapC C-terminal domain ABAYE1858 PF13954 PapC N-terminal domain ABAYE1858 PF00577 Outer membrane usher protein ABAYE1861 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE1861 PF00107 Zinc-binding dehydrogenase ABAYE1863 PF00199 Catalase ABAYE1877 PF01244 Membrane dipeptidase (Peptidase family M19) ABAYE1878 PF13186 Iron-sulfur cluster-binding domain ABAYE1878 PF04055 Radical SAM superfamily ABAYE1879 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABAYE1880 PF03070 TENA/THI-4/PQQC family ABAYE1881 PF12706 Beta-lactamase superfamily domain ABAYE1882 PF08042 PqqA family ABAYE1886 PF00149 Calcineurin-like phosphoesterase ABAYE1888 PF00857 Isochorismatase family ABAYE1888 PF00550 Phosphopantetheine attachment site ABAYE1890 PF00106 short chain dehydrogenase ABAYE1892 PF03459 TOBE domain ABAYE1892 PF00005 ABC transporter ABAYE1893 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1895 PF03459 TOBE domain ABAYE1895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1896 PF00355 Rieske [2Fe-2S] domain ABAYE1896 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABAYE1897 PF00866 Ring hydroxylating beta subunit ABAYE1898 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE1898 PF00970 Oxidoreductase FAD-binding domain ABAYE1898 PF00175 Oxidoreductase NAD-binding domain ABAYE1900 PF14525 AraC-binding-like domain ABAYE1900 PF12833 Helix-turn-helix domain ABAYE1902 PF01613 Flavin reductase like domain ABAYE1907 PF07690 Major Facilitator Superfamily ABAYE1908 PF06719 AraC-type transcriptional regulator N-terminus ABAYE1908 PF12833 Helix-turn-helix domain ABAYE1912 PF03466 LysR substrate binding domain ABAYE1912 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1913 PF01144 Coenzyme A transferase ABAYE1914 PF01144 Coenzyme A transferase ABAYE1915 PF02667 Short chain fatty acid transporter ABAYE1916 PF02803 Thiolase, C-terminal domain ABAYE1916 PF00108 Thiolase, N-terminal domain ABAYE1917 PF03466 LysR substrate binding domain ABAYE1917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1918 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE1918 PF03466 LysR substrate binding domain ABAYE1921 PF00206 Lyase ABAYE1921 PF10415 Fumarase C C-terminus ABAYE1922 PF00593 TonB dependent receptor ABAYE1922 PF07715 TonB-dependent Receptor Plug Domain ABAYE1923 PF00083 Sugar (and other) transporter ABAYE1926 PF00005 ABC transporter ABAYE1927 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE1928 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABAYE1930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE1930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1933 PF02525 Flavodoxin-like fold ABAYE1934 PF01638 HxlR-like helix-turn-helix ABAYE1935 PF06445 GyrI-like small molecule binding domain ABAYE1935 PF12833 Helix-turn-helix domain ABAYE1938 PF01925 Sulfite exporter TauE/SafE ABAYE1939 PF04273 Putative phosphatase (DUF442) ABAYE1939 PF00753 Metallo-beta-lactamase superfamily ABAYE1940 PF00753 Metallo-beta-lactamase superfamily ABAYE1940 PF04273 Putative phosphatase (DUF442) ABAYE1941 PF00072 Response regulator receiver domain ABAYE1941 PF00158 Sigma-54 interaction domain ABAYE1941 PF02954 Bacterial regulatory protein, Fis family ABAYE1942 PF01062 Bestrophin, RFP-TM, chloride channel ABAYE1943 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE1943 PF00107 Zinc-binding dehydrogenase ABAYE1944 PF00106 short chain dehydrogenase ABAYE1945 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE1945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE1946 PF02817 e3 binding domain ABAYE1946 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABAYE1946 PF00364 Biotin-requiring enzyme ABAYE1947 PF02780 Transketolase, C-terminal domain ABAYE1947 PF02779 Transketolase, pyrimidine binding domain ABAYE1948 PF00676 Dehydrogenase E1 component ABAYE1949 PF04055 Radical SAM superfamily ABAYE1952 PF08448 PAS fold ABAYE1952 PF00990 Diguanylate cyclase, GGDEF domain ABAYE1953 PF01264 Chorismate synthase ABAYE1954 PF05175 Methyltransferase small domain ABAYE1955 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE1958 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE1958 PF01434 Peptidase family M41 ABAYE1958 PF17862 AAA+ lid domain ABAYE1960 PF05166 YcgL domain ABAYE1965 PF00570 HRDC domain ABAYE1965 PF01612 3'-5' exonuclease ABAYE1966 PF02132 RecR protein ABAYE1966 PF13662 Toprim domain ABAYE1967 PF02575 YbaB/EbfC DNA-binding family ABAYE1970 PF01053 Cys/Met metabolism PLP-dependent enzyme ABAYE1971 PF00561 alpha/beta hydrolase fold ABAYE1972 PF08241 Methyltransferase domain ABAYE1978 PF01230 HIT domain ABAYE1983 PF02684 Lipid-A-disaccharide synthetase ABAYE1984 PF00593 TonB dependent receptor ABAYE1984 PF07715 TonB-dependent Receptor Plug Domain ABAYE1988 PF01925 Sulfite exporter TauE/SafE ABAYE1989 PF00793 DAHP synthetase I family ABAYE1990 PF02654 Cobalamin-5-phosphate synthase ABAYE1992 PF00300 Histidine phosphatase superfamily (branch 1) ABAYE1993 PF02277 Phosphoribosyltransferase ABAYE1994 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABAYE1996 PF13419 Haloacid dehalogenase-like hydrolase ABAYE2001 PF00593 TonB dependent receptor ABAYE2001 PF07715 TonB-dependent Receptor Plug Domain ABAYE2002 PF03737 Aldolase/RraA ABAYE2004 PF04183 IucA / IucC family ABAYE2004 PF06276 Ferric iron reductase FhuF-like transporter ABAYE2005 PF04183 IucA / IucC family ABAYE2005 PF06276 Ferric iron reductase FhuF-like transporter ABAYE2006 PF07690 Major Facilitator Superfamily ABAYE2007 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABAYE2008 PF06276 Ferric iron reductase FhuF-like transporter ABAYE2008 PF04183 IucA / IucC family ABAYE2009 PF04073 Aminoacyl-tRNA editing domain ABAYE2011 PF03109 ABC1 family ABAYE2012 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2012 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2012 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2013 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2013 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2013 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2014 PF00487 Fatty acid desaturase ABAYE2015 PF12833 Helix-turn-helix domain ABAYE2015 PF12852 Cupin ABAYE2016 PF09312 SurA N-terminal domain ABAYE2016 PF00639 PPIC-type PPIASE domain ABAYE2017 PF00216 Bacterial DNA-binding protein ABAYE2020 PF02082 Transcriptional regulator ABAYE2021 PF00266 Aminotransferase class-V ABAYE2022 PF01592 NifU-like N terminal domain ABAYE2023 PF01521 Iron-sulphur cluster biosynthesis ABAYE2024 PF00226 DnaJ domain ABAYE2024 PF07743 HSCB C-terminal oligomerisation domain ABAYE2025 PF00012 Hsp70 protein ABAYE2026 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE2027 PF00211 Adenylate and Guanylate cyclase catalytic domain ABAYE2029 PF02559 CarD-like/TRCF domain ABAYE2029 PF00271 Helicase conserved C-terminal domain ABAYE2029 PF00270 DEAD/DEAH box helicase ABAYE2029 PF03461 TRCF domain ABAYE2029 PF17757 UvrB interaction domain ABAYE2033 PF03737 Aldolase/RraA ABAYE2034 PF13460 NAD(P)H-binding ABAYE2035 PF01649 Ribosomal protein S20 ABAYE2037 PF00459 Inositol monophosphatase family ABAYE2040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABAYE2040 PF00005 ABC transporter ABAYE2041 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2042 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2043 PF01432 Peptidase family M3 ABAYE2046 PF07715 TonB-dependent Receptor Plug Domain ABAYE2046 PF00593 TonB dependent receptor ABAYE2047 PF03544 Gram-negative bacterial TonB protein C-terminal ABAYE2049 PF01618 MotA/TolQ/ExbB proton channel family ABAYE2050 PF02472 Biopolymer transport protein ExbD/TolR ABAYE2051 PF02472 Biopolymer transport protein ExbD/TolR ABAYE2053 PF01274 Malate synthase ABAYE2054 PF03969 AFG1-like ATPase ABAYE2056 PF00743 Flavin-binding monooxygenase-like ABAYE2058 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABAYE2060 PF00216 Bacterial DNA-binding protein ABAYE2061 PF00575 S1 RNA binding domain ABAYE2062 PF02224 Cytidylate kinase ABAYE2064 PF14437 MafB19-like deaminase ABAYE2066 PF03167 Uracil DNA glycosylase superfamily ABAYE2068 PF03934 Type II secretion system (T2SS), protein K ABAYE2069 PF07963 Prokaryotic N-terminal methylation motif ABAYE2069 PF11612 Type II secretion system (T2SS), protein J ABAYE2070 PF02501 Type II secretion system (T2SS), protein I ABAYE2070 PF07963 Prokaryotic N-terminal methylation motif ABAYE2073 PF01026 TatD related DNase ABAYE2075 PF09115 DNA polymerase III, delta subunit, C terminal ABAYE2076 PF02348 Cytidylyltransferase ABAYE2077 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABAYE2078 PF00005 ABC transporter ABAYE2078 PF00664 ABC transporter transmembrane region ABAYE2080 PF01618 MotA/TolQ/ExbB proton channel family ABAYE2081 PF17762 HTH domain found in ParB protein ABAYE2081 PF02195 ParB-like nuclease domain ABAYE2082 PF13614 AAA domain ABAYE2083 PF02527 rRNA small subunit methyltransferase G ABAYE2084 PF00483 Nucleotidyl transferase ABAYE2085 PF01636 Phosphotransferase enzyme family ABAYE2086 PF03968 OstA-like protein ABAYE2086 PF04453 LPS transport system D ABAYE2087 PF09312 SurA N-terminal domain ABAYE2087 PF00639 PPIC-type PPIASE domain ABAYE2088 PF01116 Fructose-bisphosphate aldolase class-II ABAYE2090 PF00162 Phosphoglycerate kinase ABAYE2092 PF02545 Maf-like protein ABAYE2093 PF08007 Cupin superfamily protein ABAYE2097 PF00375 Sodium:dicarboxylate symporter family ABAYE2098 PF06912 Protein of unknown function (DUF1275) ABAYE2099 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABAYE2100 PF00664 ABC transporter transmembrane region ABAYE2100 PF00005 ABC transporter ABAYE2102 PF12833 Helix-turn-helix domain ABAYE2102 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABAYE2103 PF01597 Glycine cleavage H-protein ABAYE2104 PF02146 Sir2 family ABAYE2105 PF00474 Sodium:solute symporter family ABAYE2106 PF01037 Lrp/AsnC ligand binding domain ABAYE2108 PF00171 Aldehyde dehydrogenase family ABAYE2108 PF01619 Proline dehydrogenase ABAYE2108 PF14850 DNA-binding domain of Proline dehydrogenase ABAYE2108 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABAYE2109 PF04229 GrpB protein ABAYE2110 PF05958 tRNA (Uracil-5-)-methyltransferase ABAYE2112 PF09992 Phosphodiester glycosidase ABAYE2114 PF04264 YceI-like domain ABAYE2116 PF02779 Transketolase, pyrimidine binding domain ABAYE2116 PF00456 Transketolase, thiamine diphosphate binding domain ABAYE2116 PF02780 Transketolase, C-terminal domain ABAYE2118 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABAYE2118 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABAYE2118 PF02772 S-adenosylmethionine synthetase, central domain ABAYE2122 PF00905 Penicillin binding protein transpeptidase domain ABAYE2126 PF02075 Crossover junction endodeoxyribonuclease RuvC ABAYE2127 PF03853 YjeF-related protein N-terminus ABAYE2127 PF01256 Carbohydrate kinase ABAYE2128 PF08331 Domain of unknown function (DUF1730) ABAYE2129 PF06968 Biotin and Thiamin Synthesis associated domain ABAYE2129 PF04055 Radical SAM superfamily ABAYE2132 PF16970 Type-1 fimbrial protein, A ABAYE2133 PF02753 Pili assembly chaperone PapD, C-terminal domain ABAYE2133 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABAYE2142 PF00892 EamA-like transporter family ABAYE2145 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABAYE2147 PF03466 LysR substrate binding domain ABAYE2147 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2152 PF00440 Bacterial regulatory proteins, tetR family ABAYE2155 PF01709 Transcriptional regulator ABAYE2156 PF01037 Lrp/AsnC ligand binding domain ABAYE2158 PF00005 ABC transporter ABAYE2159 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2160 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2164 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2164 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2166 PF00296 Luciferase-like monooxygenase ABAYE2167 PF03180 NLPA lipoprotein ABAYE2168 PF03180 NLPA lipoprotein ABAYE2169 PF00005 ABC transporter ABAYE2169 PF09383 NIL domain ABAYE2170 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2171 PF06071 Protein of unknown function (DUF933) ABAYE2171 PF01926 50S ribosome-binding GTPase ABAYE2176 PF03591 AzlC protein ABAYE2177 PF05437 Branched-chain amino acid transport protein (AzlD) ABAYE2179 PF02222 ATP-grasp domain ABAYE2180 PF08335 GlnD PII-uridylyltransferase ABAYE2180 PF01966 HD domain ABAYE2180 PF01909 Nucleotidyltransferase domain ABAYE2181 PF00155 Aminotransferase class I and II ABAYE2183 PF12852 Cupin ABAYE2183 PF12833 Helix-turn-helix domain ABAYE2184 PF00255 Glutathione peroxidase ABAYE2185 PF01641 SelR domain ABAYE2186 PF00155 Aminotransferase class I and II ABAYE2187 PF00375 Sodium:dicarboxylate symporter family ABAYE2188 PF00710 Asparaginase, N-terminal ABAYE2188 PF17763 Glutaminase/Asparaginase C-terminal domain ABAYE2189 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABAYE2189 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABAYE2189 PF14579 Helix-hairpin-helix motif ABAYE2189 PF01336 OB-fold nucleic acid binding domain ABAYE2189 PF02811 PHP domain ABAYE2190 PF00588 SpoU rRNA Methylase family ABAYE2191 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE2194 PF13192 Thioredoxin domain ABAYE2194 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2197 PF03466 LysR substrate binding domain ABAYE2197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2198 PF01758 Sodium Bile acid symporter family ABAYE2199 PF01022 Bacterial regulatory protein, arsR family ABAYE2200 PF03960 ArsC family ABAYE2202 PF01979 Amidohydrolase family ABAYE2202 PF13382 Adenine deaminase C-terminal domain ABAYE2204 PF03466 LysR substrate binding domain ABAYE2204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2207 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABAYE2208 PF01177 Asp/Glu/Hydantoin racemase ABAYE2209 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABAYE2210 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2211 PF00005 ABC transporter ABAYE2212 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABAYE2214 PF00083 Sugar (and other) transporter ABAYE2215 PF00296 Luciferase-like monooxygenase ABAYE2219 PF01654 Cytochrome bd terminal oxidase subunit I ABAYE2220 PF02322 Cytochrome bd terminal oxidase subunit II ABAYE2223 PF00155 Aminotransferase class I and II ABAYE2223 PF00392 Bacterial regulatory proteins, gntR family ABAYE2224 PF03466 LysR substrate binding domain ABAYE2224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2227 PF00698 Acyl transferase domain ABAYE2228 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABAYE2230 PF01039 Carboxyl transferase domain ABAYE2231 PF06857 Malonate decarboxylase delta subunit (MdcD) ABAYE2232 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABAYE2233 PF16957 Malonate decarboxylase, alpha subunit, transporter ABAYE2235 PF07690 Major Facilitator Superfamily ABAYE2240 PF04172 LrgB-like family ABAYE2241 PF03788 LrgA family ABAYE2242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2242 PF03466 LysR substrate binding domain ABAYE2243 PF02798 Glutathione S-transferase, N-terminal domain ABAYE2243 PF14834 Glutathione S-transferase, C-terminal domain ABAYE2244 PF02798 Glutathione S-transferase, N-terminal domain ABAYE2245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2245 PF03466 LysR substrate binding domain ABAYE2247 PF00581 Rhodanese-like domain ABAYE2248 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE2250 PF00266 Aminotransferase class-V ABAYE2251 PF01810 LysE type translocator ABAYE2252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2252 PF03466 LysR substrate binding domain ABAYE2253 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABAYE2254 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABAYE2255 PF00005 ABC transporter ABAYE2256 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2257 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2259 PF00072 Response regulator receiver domain ABAYE2260 PF00512 His Kinase A (phospho-acceptor) domain ABAYE2260 PF09308 LuxQ, periplasmic ABAYE2260 PF00072 Response regulator receiver domain ABAYE2260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE2262 PF01037 Lrp/AsnC ligand binding domain ABAYE2262 PF13404 AsnC-type helix-turn-helix domain ABAYE2264 PF00717 Peptidase S24-like ABAYE2270 PF06628 Catalase-related immune-responsive ABAYE2270 PF00199 Catalase ABAYE2270 PF18011 C-terminal domain found in long catalases ABAYE2272 PF02464 Competence-damaged protein ABAYE2272 PF18146 Damage-inducible protein CinA KH domain ABAYE2272 PF00994 Probable molybdopterin binding domain ABAYE2282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2282 PF03466 LysR substrate binding domain ABAYE2286 PF00501 AMP-binding enzyme ABAYE2286 PF13193 AMP-binding enzyme C-terminal domain ABAYE2287 PF00440 Bacterial regulatory proteins, tetR family ABAYE2288 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2288 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2288 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2289 PF01039 Carboxyl transferase domain ABAYE2290 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2291 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE2291 PF00289 Biotin carboxylase, N-terminal domain ABAYE2291 PF02785 Biotin carboxylase C-terminal domain ABAYE2291 PF00364 Biotin-requiring enzyme ABAYE2292 PF00682 HMGL-like ABAYE2293 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2293 PF03466 LysR substrate binding domain ABAYE2296 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2296 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2296 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABAYE2296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2298 PF07690 Major Facilitator Superfamily ABAYE2300 PF01144 Coenzyme A transferase ABAYE2301 PF01144 Coenzyme A transferase ABAYE2302 PF07690 Major Facilitator Superfamily ABAYE2303 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2303 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2303 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2304 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2306 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABAYE2306 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABAYE2306 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABAYE2307 PF02803 Thiolase, C-terminal domain ABAYE2307 PF00108 Thiolase, N-terminal domain ABAYE2308 PF09339 IclR helix-turn-helix domain ABAYE2309 PF07690 Major Facilitator Superfamily ABAYE2310 PF03060 Nitronate monooxygenase ABAYE2311 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2312 PF09339 IclR helix-turn-helix domain ABAYE2314 PF02515 CoA-transferase family III ABAYE2315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2315 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2316 PF07690 Major Facilitator Superfamily ABAYE2317 PF13419 Haloacid dehalogenase-like hydrolase ABAYE2318 PF00266 Aminotransferase class-V ABAYE2319 PF01266 FAD dependent oxidoreductase ABAYE2320 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2321 PF00005 ABC transporter ABAYE2321 PF08402 TOBE domain ABAYE2323 PF07702 UTRA domain ABAYE2323 PF00392 Bacterial regulatory proteins, gntR family ABAYE2324 PF01494 FAD binding domain ABAYE2325 PF09339 IclR helix-turn-helix domain ABAYE2325 PF01614 Bacterial transcriptional regulator ABAYE2326 PF02525 Flavodoxin-like fold ABAYE2327 PF03466 LysR substrate binding domain ABAYE2327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2328 PF02627 Carboxymuconolactone decarboxylase family ABAYE2329 PF00171 Aldehyde dehydrogenase family ABAYE2331 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABAYE2333 PF00171 Aldehyde dehydrogenase family ABAYE2334 PF00296 Luciferase-like monooxygenase ABAYE2335 PF01613 Flavin reductase like domain ABAYE2336 PF12697 Alpha/beta hydrolase family ABAYE2341 PF01292 Prokaryotic cytochrome b561 ABAYE2342 PF00199 Catalase ABAYE2343 PF07690 Major Facilitator Superfamily ABAYE2344 PF00682 HMGL-like ABAYE2345 PF02515 CoA-transferase family III ABAYE2352 PF00313 'Cold-shock' DNA-binding domain ABAYE2361 PF13361 UvrD-like helicase C-terminal domain ABAYE2361 PF00580 UvrD/REP helicase N-terminal domain ABAYE2362 PF02463 RecF/RecN/SMC N terminal domain ABAYE2363 PF03061 Thioesterase superfamily ABAYE2364 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE2365 PF07848 PaaX-like protein ABAYE2365 PF08223 PaaX-like protein C-terminal domain ABAYE2366 PF00501 AMP-binding enzyme ABAYE2366 PF14535 AMP-binding enzyme C-terminal domain ABAYE2367 PF00108 Thiolase, N-terminal domain ABAYE2367 PF02803 Thiolase, C-terminal domain ABAYE2368 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABAYE2368 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABAYE2368 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABAYE2369 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2370 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2371 PF00970 Oxidoreductase FAD-binding domain ABAYE2371 PF00175 Oxidoreductase NAD-binding domain ABAYE2371 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE2372 PF01883 Iron-sulfur cluster assembly protein ABAYE2373 PF05138 Phenylacetic acid catabolic protein ABAYE2374 PF06243 Phenylacetic acid degradation B ABAYE2375 PF05138 Phenylacetic acid catabolic protein ABAYE2376 PF00171 Aldehyde dehydrogenase family ABAYE2376 PF01575 MaoC like domain ABAYE2377 PF03313 Serine dehydratase alpha chain ABAYE2377 PF03315 Serine dehydratase beta chain ABAYE2378 PF13520 Amino acid permease ABAYE2379 PF00171 Aldehyde dehydrogenase family ABAYE2380 PF00083 Sugar (and other) transporter ABAYE2382 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2382 PF04324 BFD-like [2Fe-2S] binding domain ABAYE2384 PF01266 FAD dependent oxidoreductase ABAYE2385 PF05544 Proline racemase ABAYE2386 PF00392 Bacterial regulatory proteins, gntR family ABAYE2388 PF00701 Dihydrodipicolinate synthetase family ABAYE2390 PF09278 MerR, DNA binding ABAYE2390 PF00376 MerR family regulatory protein ABAYE2392 PF02677 Epoxyqueuosine reductase QueH ABAYE2395 PF07690 Major Facilitator Superfamily ABAYE2396 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABAYE2398 PF03466 LysR substrate binding domain ABAYE2398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2404 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE2404 PF07724 AAA domain (Cdc48 subfamily) ABAYE2404 PF17871 AAA lid domain ABAYE2404 PF10431 C-terminal, D2-small domain, of ClpB protein ABAYE2406 PF01389 OmpA-like transmembrane domain ABAYE2406 PF00691 OmpA family ABAYE2420 PF00005 ABC transporter ABAYE2421 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABAYE2422 PF01425 Amidase ABAYE2423 PF01402 Ribbon-helix-helix protein, copG family ABAYE2423 PF08753 NikR C terminal nickel binding domain ABAYE2425 PF01638 HxlR-like helix-turn-helix ABAYE2426 PF02525 Flavodoxin-like fold ABAYE2427 PF00364 Biotin-requiring enzyme ABAYE2428 PF02785 Biotin carboxylase C-terminal domain ABAYE2428 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE2428 PF00289 Biotin carboxylase, N-terminal domain ABAYE2431 PF13823 Alcohol dehydrogenase GroES-associated ABAYE2431 PF00107 Zinc-binding dehydrogenase ABAYE2431 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE2433 PF00440 Bacterial regulatory proteins, tetR family ABAYE2437 PF00654 Voltage gated chloride channel ABAYE2438 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABAYE2438 PF00289 Biotin carboxylase, N-terminal domain ABAYE2438 PF02785 Biotin carboxylase C-terminal domain ABAYE2438 PF00364 Biotin-requiring enzyme ABAYE2440 PF07286 Protein of unknown function (DUF1445) ABAYE2441 PF03746 LamB/YcsF family ABAYE2442 PF01566 Natural resistance-associated macrophage protein ABAYE2443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2443 PF03466 LysR substrate binding domain ABAYE2447 PF05593 RHS Repeat ABAYE2447 PF03527 RHS protein ABAYE2454 PF16671 Actin cross-linking domain ABAYE2454 PF04717 Type VI secretion system, phage-baseplate injector ABAYE2460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABAYE2460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABAYE2465 PF07690 Major Facilitator Superfamily ABAYE2468 PF03279 Bacterial lipid A biosynthesis acyltransferase ABAYE2469 PF00563 EAL domain ABAYE2469 PF00990 Diguanylate cyclase, GGDEF domain ABAYE2469 PF03707 Bacterial signalling protein N terminal repeat ABAYE2471 PF00892 EamA-like transporter family ABAYE2475 PF01037 Lrp/AsnC ligand binding domain ABAYE2476 PF05192 MutS domain III ABAYE2476 PF05190 MutS family domain IV ABAYE2476 PF01624 MutS domain I ABAYE2476 PF00488 MutS domain V ABAYE2476 PF05188 MutS domain II ABAYE2479 PF00037 4Fe-4S binding domain ABAYE2479 PF11953 Domain of unknown function (DUF3470) ABAYE2481 PF01596 O-methyltransferase ABAYE2483 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE2484 PF01205 Uncharacterized protein family UPF0029 ABAYE2486 PF00005 ABC transporter ABAYE2486 PF03412 Peptidase C39 family ABAYE2486 PF00664 ABC transporter transmembrane region ABAYE2487 PF02321 Outer membrane efflux protein ABAYE2488 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABAYE2488 PF00005 ABC transporter ABAYE2489 PF03968 OstA-like protein ABAYE2492 PF00571 CBS domain ABAYE2492 PF01380 SIS domain ABAYE2493 PF01406 tRNA synthetases class I (C) catalytic domain ABAYE2493 PF09190 DALR domain ABAYE2495 PF00589 Phage integrase family ABAYE2503 PF12708 Pectate lyase superfamily protein ABAYE2503 PF13229 Right handed beta helix region ABAYE2507 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) ABAYE2511 PF06381 Protein of unknown function (DUF1073) ABAYE2526 PF01638 HxlR-like helix-turn-helix ABAYE2527 PF07690 Major Facilitator Superfamily ABAYE2533 PF03807 NADP oxidoreductase coenzyme F420-dependent ABAYE2533 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABAYE2535 PF00313 'Cold-shock' DNA-binding domain ABAYE2536 PF01810 LysE type translocator ABAYE2542 PF13742 OB-fold nucleic acid binding domain ABAYE2542 PF02601 Exonuclease VII, large subunit ABAYE2550 PF00376 MerR family regulatory protein ABAYE2550 PF09278 MerR, DNA binding ABAYE2551 PF00403 Heavy-metal-associated domain ABAYE2553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2553 PF03466 LysR substrate binding domain ABAYE2555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABAYE2555 PF00355 Rieske [2Fe-2S] domain ABAYE2556 PF00866 Ring hydroxylating beta subunit ABAYE2557 PF00175 Oxidoreductase NAD-binding domain ABAYE2557 PF00970 Oxidoreductase FAD-binding domain ABAYE2557 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE2558 PF00106 short chain dehydrogenase ABAYE2559 PF03594 Benzoate membrane transport protein ABAYE2560 PF07690 Major Facilitator Superfamily ABAYE2562 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABAYE2562 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABAYE2563 PF00271 Helicase conserved C-terminal domain ABAYE2563 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABAYE2563 PF11898 Domain of unknown function (DUF3418) ABAYE2563 PF04408 Helicase associated domain (HA2) ABAYE2563 PF00270 DEAD/DEAH box helicase ABAYE2564 PF00578 AhpC/TSA family ABAYE2564 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABAYE2568 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2568 PF13192 Thioredoxin domain ABAYE2570 PF00043 Glutathione S-transferase, C-terminal domain ABAYE2570 PF02798 Glutathione S-transferase, N-terminal domain ABAYE2572 PF02390 Putative methyltransferase ABAYE2573 PF13417 Glutathione S-transferase, N-terminal domain ABAYE2573 PF00043 Glutathione S-transferase, C-terminal domain ABAYE2575 PF13488 Glycine zipper ABAYE2575 PF00691 OmpA family ABAYE2577 PF01979 Amidohydrolase family ABAYE2578 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABAYE2578 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABAYE2580 PF02926 THUMP domain ABAYE2580 PF01170 Putative RNA methylase family UPF0020 ABAYE2580 PF10672 S-adenosylmethionine-dependent methyltransferase ABAYE2583 PF10431 C-terminal, D2-small domain, of ClpB protein ABAYE2583 PF07724 AAA domain (Cdc48 subfamily) ABAYE2583 PF02861 Clp amino terminal domain, pathogenicity island component ABAYE2583 PF17871 AAA lid domain ABAYE2583 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE2587 PF02566 OsmC-like protein ABAYE2588 PF00027 Cyclic nucleotide-binding domain ABAYE2588 PF13545 Crp-like helix-turn-helix domain ABAYE2589 PF00248 Aldo/keto reductase family ABAYE2592 PF00709 Adenylosuccinate synthetase ABAYE2593 PF13393 Histidyl-tRNA synthetase ABAYE2594 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABAYE2594 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABAYE2595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABAYE2595 PF02272 DHHA1 domain ABAYE2595 PF01411 tRNA synthetases class II (A) ABAYE2596 PF13840 ACT domain ABAYE2596 PF00696 Amino acid kinase family ABAYE2596 PF01842 ACT domain ABAYE2597 PF02599 Global regulator protein family ABAYE2598 PF01351 Ribonuclease HII ABAYE2600 PF01292 Prokaryotic cytochrome b561 ABAYE2601 PF00962 Adenosine/AMP deaminase ABAYE2602 PF00860 Permease family ABAYE2606 PF00743 Flavin-binding monooxygenase-like ABAYE2607 PF00106 short chain dehydrogenase ABAYE2610 PF02678 Pirin ABAYE2610 PF17954 Quercetinase C-terminal cupin domain ABAYE2611 PF17932 Tetracyclin repressor-like, C-terminal domain ABAYE2611 PF00440 Bacterial regulatory proteins, tetR family ABAYE2613 PF00106 short chain dehydrogenase ABAYE2614 PF00743 Flavin-binding monooxygenase-like ABAYE2615 PF04072 Leucine carboxyl methyltransferase ABAYE2616 PF12833 Helix-turn-helix domain ABAYE2616 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABAYE2617 PF00743 Flavin-binding monooxygenase-like ABAYE2618 PF00106 short chain dehydrogenase ABAYE2619 PF07859 alpha/beta hydrolase fold ABAYE2620 PF05199 GMC oxidoreductase ABAYE2621 PF03573 outer membrane porin, OprD family ABAYE2622 PF07690 Major Facilitator Superfamily ABAYE2623 PF00355 Rieske [2Fe-2S] domain ABAYE2624 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE2624 PF00175 Oxidoreductase NAD-binding domain ABAYE2627 PF07690 Major Facilitator Superfamily ABAYE2628 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2629 PF00171 Aldehyde dehydrogenase family ABAYE2631 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE2631 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE2631 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE2632 PF03573 outer membrane porin, OprD family ABAYE2635 PF07519 Tannase and feruloyl esterase ABAYE2638 PF03180 NLPA lipoprotein ABAYE2640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE2640 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2641 PF00764 Arginosuccinate synthase ABAYE2642 PF01590 GAF domain ABAYE2642 PF00563 EAL domain ABAYE2642 PF00360 Phytochrome region ABAYE2642 PF00990 Diguanylate cyclase, GGDEF domain ABAYE2646 PF01979 Amidohydrolase family ABAYE2647 PF00929 Exonuclease ABAYE2648 PF00593 TonB dependent receptor ABAYE2648 PF07715 TonB-dependent Receptor Plug Domain ABAYE2658 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABAYE2658 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2659 PF00005 ABC transporter ABAYE2659 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABAYE2660 PF12911 N-terminal TM domain of oligopeptide transport permease C ABAYE2660 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2661 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE2662 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABAYE2663 PF01476 LysM domain ABAYE2663 PF01476 LysM domain ABAYE2663 PF01464 Transglycosylase SLT domain ABAYE2663 PF01464 Transglycosylase SLT domain ABAYE2664 PF00929 Exonuclease ABAYE2666 PF09297 NADH pyrophosphatase zinc ribbon domain ABAYE2666 PF00293 NUDIX domain ABAYE2668 PF04972 BON domain ABAYE2669 PF02021 Uncharacterised protein family UPF0102 ABAYE2670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABAYE2672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2672 PF03466 LysR substrate binding domain ABAYE2673 PF01810 LysE type translocator ABAYE2675 PF13411 MerR HTH family regulatory protein ABAYE2677 PF01494 FAD binding domain ABAYE2678 PF01494 FAD binding domain ABAYE2679 PF05195 Aminopeptidase P, N-terminal domain ABAYE2679 PF00557 Metallopeptidase family M24 ABAYE2687 PF00313 'Cold-shock' DNA-binding domain ABAYE2698 PF01551 Peptidase family M23 ABAYE2698 PF08525 Opacity-associated protein A N-terminal motif ABAYE2698 PF01476 LysM domain ABAYE2742 PF00772 DnaB-like helicase N terminal domain ABAYE2742 PF03796 DnaB-like helicase C terminal domain ABAYE2749 PF02384 N-6 DNA Methylase ABAYE2749 PF12161 HsdM N-terminal domain ABAYE2759 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABAYE2760 PF00004 ATPase family associated with various cellular activities (AAA) ABAYE2760 PF05362 Lon protease (S16) C-terminal proteolytic domain ABAYE2760 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABAYE2761 PF02590 Predicted SPOUT methyltransferase ABAYE2762 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABAYE2764 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABAYE2764 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABAYE2765 PF04060 Putative Fe-S cluster ABAYE2766 PF10576 Iron-sulfur binding domain of endonuclease III ABAYE2766 PF00633 Helix-hairpin-helix motif ABAYE2766 PF00730 HhH-GPD superfamily base excision DNA repair protein ABAYE2767 PF05191 Adenylate kinase, active site lid ABAYE2770 PF03717 Penicillin-binding Protein dimerisation domain ABAYE2770 PF00905 Penicillin binding protein transpeptidase domain ABAYE2773 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABAYE2774 PF01730 UreF ABAYE2775 PF02814 UreE urease accessory protein, N-terminal domain ABAYE2775 PF05194 UreE urease accessory protein, C-terminal domain ABAYE2776 PF00449 Urease alpha-subunit, N-terminal domain ABAYE2776 PF01979 Amidohydrolase family ABAYE2777 PF00699 Urease beta subunit ABAYE2778 PF00547 Urease, gamma subunit ABAYE2779 PF01774 UreD urease accessory protein ABAYE2783 PF00463 Isocitrate lyase family ABAYE2785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2785 PF03466 LysR substrate binding domain ABAYE2786 PF01595 Cyclin M transmembrane N-terminal domain ABAYE2786 PF00571 CBS domain ABAYE2786 PF03471 Transporter associated domain ABAYE2787 PF03600 Citrate transporter ABAYE2790 PF00009 Elongation factor Tu GTP binding domain ABAYE2791 PF01507 Phosphoadenosine phosphosulfate reductase family ABAYE2793 PF14052 Capsule assembly protein Wzi ABAYE2794 PF01336 OB-fold nucleic acid binding domain ABAYE2794 PF00152 tRNA synthetases class II (D, K and N) ABAYE2798 PF00301 Rubredoxin ABAYE2799 PF18113 Rubredoxin binding C-terminal domain ABAYE2799 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2800 PF00561 alpha/beta hydrolase fold ABAYE2801 PF03466 LysR substrate binding domain ABAYE2801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2803 PF13089 Polyphosphate kinase N-terminal domain ABAYE2803 PF17941 Polyphosphate kinase C-terminal domain 1 ABAYE2803 PF13090 Polyphosphate kinase C-terminal domain 2 ABAYE2803 PF02503 Polyphosphate kinase middle domain ABAYE2804 PF00912 Transglycosylase ABAYE2805 PF01694 Rhomboid family ABAYE2807 PF00005 ABC transporter ABAYE2808 PF13472 GDSL-like Lipase/Acylhydrolase family ABAYE2809 PF00484 Carbonic anhydrase ABAYE2810 PF00561 alpha/beta hydrolase fold ABAYE2812 PF00593 TonB dependent receptor ABAYE2812 PF07715 TonB-dependent Receptor Plug Domain ABAYE2813 PF01521 Iron-sulphur cluster biosynthesis ABAYE2813 PF01106 NifU-like domain ABAYE2815 PF00884 Sulfatase ABAYE2816 PF03781 Sulfatase-modifying factor enzyme 1 ABAYE2819 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE2820 PF01384 Phosphate transporter family ABAYE2822 PF02574 Homocysteine S-methyltransferase ABAYE2822 PF00809 Pterin binding enzyme ABAYE2822 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABAYE2822 PF02607 B12 binding domain ABAYE2822 PF02310 B12 binding domain ABAYE2823 PF02780 Transketolase, C-terminal domain ABAYE2823 PF02779 Transketolase, pyrimidine binding domain ABAYE2824 PF00456 Transketolase, thiamine diphosphate binding domain ABAYE2825 PF07690 Major Facilitator Superfamily ABAYE2827 PF03466 LysR substrate binding domain ABAYE2827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2829 PF01263 Aldose 1-epimerase ABAYE2830 PF07690 Major Facilitator Superfamily ABAYE2831 PF02311 AraC-like ligand binding domain ABAYE2831 PF12833 Helix-turn-helix domain ABAYE2832 PF04960 Glutaminase ABAYE2833 PF01327 Polypeptide deformylase ABAYE2834 PF07690 Major Facilitator Superfamily ABAYE2836 PF00205 Thiamine pyrophosphate enzyme, central domain ABAYE2836 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABAYE2836 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABAYE2837 PF00171 Aldehyde dehydrogenase family ABAYE2838 PF03447 Homoserine dehydrogenase, NAD binding domain ABAYE2838 PF01958 Domain of unknown function DUF108 ABAYE2840 PF12697 Alpha/beta hydrolase family ABAYE2842 PF07690 Major Facilitator Superfamily ABAYE2843 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2843 PF14759 Reductase C-terminal ABAYE2844 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABAYE2846 PF00355 Rieske [2Fe-2S] domain ABAYE2848 PF00355 Rieske [2Fe-2S] domain ABAYE2849 PF01614 Bacterial transcriptional regulator ABAYE2849 PF09339 IclR helix-turn-helix domain ABAYE2852 PF00378 Enoyl-CoA hydratase/isomerase ABAYE2854 PF00535 Glycosyl transferase family 2 ABAYE2855 PF01522 Polysaccharide deacetylase ABAYE2855 PF14883 Hypothetical glycosyl hydrolase family 13 ABAYE2856 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE2857 PF07152 YaeQ protein ABAYE2858 PF00375 Sodium:dicarboxylate symporter family ABAYE2859 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABAYE2859 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABAYE2862 PF03061 Thioesterase superfamily ABAYE2864 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE2865 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE2866 PF13977 BetI-type transcriptional repressor, C-terminal ABAYE2866 PF00440 Bacterial regulatory proteins, tetR family ABAYE2867 PF00171 Aldehyde dehydrogenase family ABAYE2868 PF00732 GMC oxidoreductase ABAYE2868 PF05199 GMC oxidoreductase ABAYE2869 PF06039 Malate:quinone oxidoreductase (Mqo) ABAYE2871 PF02574 Homocysteine S-methyltransferase ABAYE2872 PF13520 Amino acid permease ABAYE2878 PF00701 Dihydrodipicolinate synthetase family ABAYE2879 PF00083 Sugar (and other) transporter ABAYE2884 PF01026 TatD related DNase ABAYE2887 PF07693 KAP family P-loop domain ABAYE2904 PF13356 Arm DNA-binding domain ABAYE2904 PF00589 Phage integrase family ABAYE2906 PF07690 Major Facilitator Superfamily ABAYE2907 PF13533 Biotin-lipoyl like ABAYE2908 PF03061 Thioesterase superfamily ABAYE2909 PF00490 Delta-aminolevulinic acid dehydratase ABAYE2910 PF01266 FAD dependent oxidoreductase ABAYE2911 PF01370 NAD dependent epimerase/dehydratase family ABAYE2911 PF08338 Domain of unknown function (DUF1731) ABAYE2915 PF12320 Type 5 capsule protein repressor C-terminal domain ABAYE2915 PF00149 Calcineurin-like phosphoesterase ABAYE2917 PF01168 Alanine racemase, N-terminal domain ABAYE2918 PF00437 Type II/IV secretion system protein ABAYE2919 PF00437 Type II/IV secretion system protein ABAYE2920 PF01475 Ferric uptake regulator family ABAYE2921 PF04355 SmpA / OmlA family ABAYE2922 PF03658 RnfH family Ubiquitin ABAYE2924 PF01814 Hemerythrin HHE cation binding domain ABAYE2925 PF13230 Glutamine amidotransferases class-II ABAYE2927 PF00696 Amino acid kinase family ABAYE2928 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABAYE2928 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABAYE2928 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABAYE2928 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABAYE2929 PF00692 dUTPase ABAYE2930 PF13361 UvrD-like helicase C-terminal domain ABAYE2930 PF00580 UvrD/REP helicase N-terminal domain ABAYE2931 PF13488 Glycine zipper ABAYE2931 PF00691 OmpA family ABAYE2932 PF01553 Acyltransferase ABAYE2934 PF03775 Septum formation inhibitor MinC, C-terminal domain ABAYE2935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABAYE2936 PF03776 Septum formation topological specificity factor MinE ABAYE2938 PF01810 LysE type translocator ABAYE2939 PF17854 FtsK alpha domain ABAYE2939 PF09397 Ftsk gamma domain ABAYE2939 PF01580 FtsK/SpoIIIE family ABAYE2939 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABAYE2940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE2941 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABAYE2942 PF04376 Arginine-tRNA-protein transferase, N terminus ABAYE2942 PF04377 Arginine-tRNA-protein transferase, C terminus ABAYE2943 PF00583 Acetyltransferase (GNAT) family ABAYE2946 PF00009 Elongation factor Tu GTP binding domain ABAYE2946 PF03143 Elongation factor Tu C-terminal domain ABAYE2946 PF03144 Elongation factor Tu domain 2 ABAYE2947 PF00679 Elongation factor G C-terminus ABAYE2947 PF14492 Elongation Factor G, domain II ABAYE2947 PF03764 Elongation factor G, domain IV ABAYE2947 PF00009 Elongation factor Tu GTP binding domain ABAYE2947 PF03144 Elongation factor Tu domain 2 ABAYE2948 PF00177 Ribosomal protein S7p/S5e ABAYE2949 PF00164 Ribosomal protein S12/S23 ABAYE2951 PF00109 Beta-ketoacyl synthase, N-terminal domain ABAYE2951 PF02801 Beta-ketoacyl synthase, C-terminal domain ABAYE2953 PF02678 Pirin ABAYE2953 PF05726 Pirin C-terminal cupin domain ABAYE2955 PF02540 NAD synthase ABAYE2955 PF00795 Carbon-nitrogen hydrolase ABAYE2957 PF00970 Oxidoreductase FAD-binding domain ABAYE2957 PF00111 2Fe-2S iron-sulfur cluster binding domain ABAYE2957 PF00175 Oxidoreductase NAD-binding domain ABAYE2958 PF00171 Aldehyde dehydrogenase family ABAYE2962 PF07859 alpha/beta hydrolase fold ABAYE2963 PF02028 BCCT, betaine/carnitine/choline family transporter ABAYE2964 PF00180 Isocitrate/isopropylmalate dehydrogenase ABAYE2965 PF03466 LysR substrate binding domain ABAYE2965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE2968 PF00037 4Fe-4S binding domain ABAYE2969 PF01467 Cytidylyltransferase-like ABAYE2970 PF01668 SmpB protein ABAYE2971 PF03358 NADPH-dependent FMN reductase ABAYE2973 PF01479 S4 domain ABAYE2973 PF00849 RNA pseudouridylate synthase ABAYE2974 PF13525 Outer membrane lipoprotein ABAYE2975 PF01807 CHC2 zinc finger ABAYE2975 PF08275 DNA primase catalytic core, N-terminal domain ABAYE2975 PF08278 DNA primase DnaG DnaB-binding ABAYE2975 PF10410 DnaB-helicase binding domain of primase ABAYE2976 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABAYE2976 PF01488 Shikimate / quinate 5-dehydrogenase ABAYE2976 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABAYE2978 PF03550 Outer membrane lipoprotein LolB ABAYE2981 PF14572 Phosphoribosyl synthetase-associated domain ABAYE2981 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABAYE2982 PF01386 Ribosomal L25p family ABAYE2983 PF01195 Peptidyl-tRNA hydrolase ABAYE2984 PF02261 Aspartate decarboxylase ABAYE2987 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABAYE2989 PF02581 Thiamine monophosphate synthase ABAYE2989 PF03070 TENA/THI-4/PQQC family ABAYE2989 PF08543 Phosphomethylpyrimidine kinase ABAYE2990 PF01476 LysM domain ABAYE2990 PF04972 BON domain ABAYE2991 PF00550 Phosphopantetheine attachment site ABAYE2993 PF00698 Acyl transferase domain ABAYE2994 PF01783 Ribosomal L32p protein family ABAYE2995 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABAYE2996 PF04315 Elongation factor P hydroxylase ABAYE2997 PF01300 Telomere recombination ABAYE2998 PF02616 Segregation and condensation protein ScpA ABAYE2999 PF04079 Segregation and condensation complex subunit ScpB ABAYE3000 PF01479 S4 domain ABAYE3000 PF00849 RNA pseudouridylate synthase ABAYE3003 PF00155 Aminotransferase class I and II ABAYE3004 PF04055 Radical SAM superfamily ABAYE3004 PF06968 Biotin and Thiamin Synthesis associated domain ABAYE3004 PF00202 Aminotransferase class-III ABAYE3005 PF12697 Alpha/beta hydrolase family ABAYE3005 PF08241 Methyltransferase domain ABAYE3006 PF02358 Trehalose-phosphatase ABAYE3007 PF00982 Glycosyltransferase family 20 ABAYE3008 PF07690 Major Facilitator Superfamily ABAYE3009 PF00210 Ferritin-like domain ABAYE3010 PF01653 NAD-dependent DNA ligase adenylation domain ABAYE3010 PF00533 BRCA1 C Terminus (BRCT) domain ABAYE3010 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABAYE3010 PF03120 NAD-dependent DNA ligase OB-fold domain ABAYE3010 PF12826 Helix-hairpin-helix motif ABAYE3012 PF02463 RecF/RecN/SMC N terminal domain ABAYE3012 PF06470 SMC proteins Flexible Hinge Domain ABAYE3014 PF01925 Sulfite exporter TauE/SafE ABAYE3016 PF03309 Type III pantothenate kinase ABAYE3017 PF02978 Signal peptide binding domain ABAYE3017 PF02881 SRP54-type protein, helical bundle domain ABAYE3017 PF00448 SRP54-type protein, GTPase domain ABAYE3019 PF01207 Dihydrouridine synthase (Dus) ABAYE3025 PF00692 dUTPase ABAYE3028 PF01048 Phosphorylase superfamily ABAYE3029 PF10609 NUBPL iron-transfer P-loop NTPase ABAYE3031 PF01588 Putative tRNA binding domain ABAYE3031 PF09334 tRNA synthetases class I (M) ABAYE3036 PF13533 Biotin-lipoyl like ABAYE3037 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE3040 PF05552 Conserved TM helix ABAYE3043 PF00970 Oxidoreductase FAD-binding domain ABAYE3043 PF00175 Oxidoreductase NAD-binding domain ABAYE3044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3044 PF03466 LysR substrate binding domain ABAYE3046 PF00313 'Cold-shock' DNA-binding domain ABAYE3048 PF00361 Proton-conducting membrane transporter ABAYE3049 PF00361 Proton-conducting membrane transporter ABAYE3050 PF00361 Proton-conducting membrane transporter ABAYE3050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABAYE3051 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABAYE3052 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABAYE3053 PF12838 4Fe-4S dicluster domain ABAYE3054 PF00146 NADH dehydrogenase ABAYE3055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABAYE3055 PF00384 Molybdopterin oxidoreductase ABAYE3055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABAYE3056 PF10531 SLBB domain ABAYE3056 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABAYE3056 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABAYE3058 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABAYE3058 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABAYE3059 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABAYE3060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABAYE3061 PF17151 Periplasmic sensor domain ABAYE3061 PF00990 Diguanylate cyclase, GGDEF domain ABAYE3063 PF00512 His Kinase A (phospho-acceptor) domain ABAYE3063 PF00672 HAMP domain ABAYE3063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3064 PF00486 Transcriptional regulatory protein, C terminal ABAYE3064 PF00072 Response regulator receiver domain ABAYE3065 PF00317 Ribonucleotide reductase, all-alpha domain ABAYE3065 PF02867 Ribonucleotide reductase, barrel domain ABAYE3065 PF03477 ATP cone domain ABAYE3067 PF00268 Ribonucleotide reductase, small chain ABAYE3069 PF02567 Phenazine biosynthesis-like protein ABAYE3076 PF16295 Tetracyclin repressor-like, C-terminal domain ABAYE3076 PF00440 Bacterial regulatory proteins, tetR family ABAYE3078 PF01613 Flavin reductase like domain ABAYE3079 PF08267 Cobalamin-independent synthase, N-terminal domain ABAYE3079 PF01717 Cobalamin-independent synthase, Catalytic domain ABAYE3082 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3082 PF03466 LysR substrate binding domain ABAYE3083 PF01810 LysE type translocator ABAYE3085 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABAYE3085 PF12833 Helix-turn-helix domain ABAYE3086 PF07687 Peptidase dimerisation domain ABAYE3086 PF01546 Peptidase family M20/M25/M40 ABAYE3088 PF03466 LysR substrate binding domain ABAYE3088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3089 PF07690 Major Facilitator Superfamily ABAYE3091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3091 PF03466 LysR substrate binding domain ABAYE3092 PF00890 FAD binding domain ABAYE3092 PF14537 Cytochrome c3 ABAYE3094 PF02515 CoA-transferase family III ABAYE3095 PF07690 Major Facilitator Superfamily ABAYE3097 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE3097 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE3097 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE3099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3099 PF03466 LysR substrate binding domain ABAYE3100 PF00107 Zinc-binding dehydrogenase ABAYE3100 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE3101 PF00962 Adenosine/AMP deaminase ABAYE3104 PF02445 Quinolinate synthetase A protein ABAYE3105 PF01960 ArgJ family ABAYE3106 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABAYE3106 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABAYE3107 PF00893 Small Multidrug Resistance protein ABAYE3110 PF05275 Copper resistance protein B precursor (CopB) ABAYE3111 PF07731 Multicopper oxidase ABAYE3111 PF07732 Multicopper oxidase ABAYE3111 PF00394 Multicopper oxidase ABAYE3114 PF00834 Ribulose-phosphate 3 epimerase family ABAYE3116 PF00756 Putative esterase ABAYE3118 PF04445 Putative SAM-dependent methyltransferase ABAYE3119 PF00814 Glycoprotease family ABAYE3120 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE3121 PF00293 NUDIX domain ABAYE3129 PF04715 Anthranilate synthase component I, N terminal region ABAYE3129 PF00425 chorismate binding enzyme ABAYE3130 PF00155 Aminotransferase class I and II ABAYE3131 PF00815 Histidinol dehydrogenase ABAYE3132 PF01634 ATP phosphoribosyltransferase ABAYE3133 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABAYE3134 PF01722 BolA-like protein ABAYE3135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABAYE3136 PF04552 Sigma-54, DNA binding domain ABAYE3136 PF04963 Sigma-54 factor, core binding domain ABAYE3136 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABAYE3141 PF00795 Carbon-nitrogen hydrolase ABAYE3143 PF01047 MarR family ABAYE3144 PF02566 OsmC-like protein ABAYE3145 PF00437 Type II/IV secretion system protein ABAYE3149 PF00476 DNA polymerase family A ABAYE3149 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABAYE3149 PF01367 5'-3' exonuclease, C-terminal SAM fold ABAYE3149 PF01612 3'-5' exonuclease ABAYE3150 PF02325 YGGT family ABAYE3151 PF03807 NADP oxidoreductase coenzyme F420-dependent ABAYE3151 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABAYE3152 PF01171 PP-loop family ABAYE3152 PF11734 TilS substrate C-terminal domain ABAYE3152 PF09179 TilS substrate binding domain ABAYE3153 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABAYE3154 PF02541 Ppx/GppA phosphatase family ABAYE3155 PF00085 Thioredoxin ABAYE3156 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABAYE3156 PF07498 Rho termination factor, N-terminal domain ABAYE3156 PF07497 Rho termination factor, RNA-binding domain ABAYE3158 PF00216 Bacterial DNA-binding protein ABAYE3159 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABAYE3159 PF01588 Putative tRNA binding domain ABAYE3159 PF03147 Ferredoxin-fold anticodon binding domain ABAYE3159 PF03484 tRNA synthetase B5 domain ABAYE3159 PF03483 B3/4 domain ABAYE3160 PF01409 tRNA synthetases class II core domain (F) ABAYE3160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABAYE3163 PF00453 Ribosomal protein L20 ABAYE3164 PF01632 Ribosomal protein L35 ABAYE3165 PF07690 Major Facilitator Superfamily ABAYE3166 PF09335 SNARE associated Golgi protein ABAYE3167 PF00043 Glutathione S-transferase, C-terminal domain ABAYE3167 PF02798 Glutathione S-transferase, N-terminal domain ABAYE3168 PF05198 Translation initiation factor IF-3, N-terminal domain ABAYE3168 PF00707 Translation initiation factor IF-3, C-terminal domain ABAYE3169 PF03129 Anticodon binding domain ABAYE3169 PF02824 TGS domain ABAYE3169 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABAYE3169 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABAYE3170 PF13193 AMP-binding enzyme C-terminal domain ABAYE3170 PF00501 AMP-binding enzyme ABAYE3171 PF04751 Protein of unknown function (DUF615) ABAYE3172 PF00381 PTS HPr component phosphorylation site ABAYE3173 PF03668 P-loop ATPase protein family ABAYE3174 PF02569 Pantoate-beta-alanine ligase ABAYE3175 PF02548 Ketopantoate hydroxymethyltransferase ABAYE3176 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABAYE3177 PF12626 Polymerase A arginine-rich C-terminus ABAYE3177 PF12627 Probable RNA and SrmB- binding site of polymerase A ABAYE3177 PF01743 Poly A polymerase head domain ABAYE3179 PF03819 MazG nucleotide pyrophosphohydrolase domain ABAYE3181 PF04607 Region found in RelA / SpoT proteins ABAYE3181 PF02824 TGS domain ABAYE3181 PF13291 ACT domain ABAYE3182 PF05958 tRNA (Uracil-5-)-methyltransferase ABAYE3184 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE3185 PF00072 Response regulator receiver domain ABAYE3185 PF00672 HAMP domain ABAYE3185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3185 PF00512 His Kinase A (phospho-acceptor) domain ABAYE3185 PF01627 Hpt domain ABAYE3185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABAYE3186 PF00378 Enoyl-CoA hydratase/isomerase ABAYE3187 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABAYE3187 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABAYE3188 PF01261 Xylose isomerase-like TIM barrel ABAYE3190 PF00106 short chain dehydrogenase ABAYE3191 PF02233 NAD(P) transhydrogenase beta subunit ABAYE3192 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABAYE3193 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABAYE3193 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABAYE3194 PF00892 EamA-like transporter family ABAYE3196 PF07690 Major Facilitator Superfamily ABAYE3201 PF00394 Multicopper oxidase ABAYE3201 PF07731 Multicopper oxidase ABAYE3201 PF07732 Multicopper oxidase ABAYE3203 PF00072 Response regulator receiver domain ABAYE3203 PF00486 Transcriptional regulatory protein, C terminal ABAYE3204 PF00512 His Kinase A (phospho-acceptor) domain ABAYE3204 PF00672 HAMP domain ABAYE3204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3205 PF04945 YHS domain ABAYE3221 PF00589 Phage integrase family ABAYE3223 PF01207 Dihydrouridine synthase (Dus) ABAYE3225 PF03466 LysR substrate binding domain ABAYE3225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3227 PF00899 ThiF family ABAYE3228 PF00694 Aconitase C-terminal domain ABAYE3228 PF00330 Aconitase family (aconitate hydratase) ABAYE3229 PF01026 TatD related DNase ABAYE3232 PF16658 Class II release factor RF3, C-terminal domain ABAYE3232 PF03144 Elongation factor Tu domain 2 ABAYE3232 PF00009 Elongation factor Tu GTP binding domain ABAYE3236 PF00563 EAL domain ABAYE3236 PF03707 Bacterial signalling protein N terminal repeat ABAYE3236 PF00990 Diguanylate cyclase, GGDEF domain ABAYE3238 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABAYE3238 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABAYE3239 PF10369 Small subunit of acetolactate synthase ABAYE3240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABAYE3240 PF00205 Thiamine pyrophosphate enzyme, central domain ABAYE3240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABAYE3244 PF09334 tRNA synthetases class I (M) ABAYE3244 PF13603 Leucyl-tRNA synthetase, Domain 2 ABAYE3244 PF00133 tRNA synthetases class I (I, L, M and V) ABAYE3244 PF08264 Anticodon-binding domain of tRNA ABAYE3247 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABAYE3248 PF12704 MacB-like periplasmic core domain ABAYE3248 PF00005 ABC transporter ABAYE3248 PF02687 FtsX-like permease family ABAYE3249 PF02321 Outer membrane efflux protein ABAYE3252 PF00929 Exonuclease ABAYE3253 PF03193 RsgA GTPase ABAYE3256 PF00462 Glutaredoxin ABAYE3257 PF02556 Preprotein translocase subunit SecB ABAYE3259 PF01926 50S ribosome-binding GTPase ABAYE3259 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABAYE3260 PF13360 PQQ-like domain ABAYE3262 PF13393 Histidyl-tRNA synthetase ABAYE3262 PF03129 Anticodon binding domain ABAYE3263 PF04551 GcpE protein ABAYE3264 PF13464 Domain of unknown function (DUF4115) ABAYE3266 PF04055 Radical SAM superfamily ABAYE3267 PF00334 Nucleoside diphosphate kinase ABAYE3268 PF04384 Iron-sulphur cluster assembly ABAYE3269 PF01569 PAP2 superfamily ABAYE3270 PF00534 Glycosyl transferases group 1 ABAYE3270 PF13439 Glycosyltransferase Family 4 ABAYE3271 PF11818 C-terminal domain of tail specific protease (DUF3340) ABAYE3271 PF03572 Peptidase family S41 ABAYE3271 PF00595 PDZ domain ABAYE3271 PF17804 Tail specific protease N-terminal domain ABAYE3272 PF00933 Glycosyl hydrolase family 3 N terminal domain ABAYE3274 PF00561 alpha/beta hydrolase fold ABAYE3276 PF00171 Aldehyde dehydrogenase family ABAYE3277 PF00171 Aldehyde dehydrogenase family ABAYE3278 PF01202 Shikimate kinase ABAYE3279 PF02447 GntP family permease ABAYE3280 PF01081 KDPG and KHG aldolase ABAYE3281 PF00920 Dehydratase family ABAYE3282 PF00871 Acetokinase family ABAYE3283 PF07085 DRTGG domain ABAYE3283 PF01515 Phosphate acetyl/butaryl transferase ABAYE3284 PF05683 Fumarase C-terminus ABAYE3284 PF05681 Fumarate hydratase (Fumerase) ABAYE3287 PF07724 AAA domain (Cdc48 subfamily) ABAYE3287 PF10431 C-terminal, D2-small domain, of ClpB protein ABAYE3287 PF06689 ClpX C4-type zinc finger ABAYE3288 PF00574 Clp protease ABAYE3289 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE3289 PF05697 Bacterial trigger factor protein (TF) ABAYE3289 PF05698 Bacterial trigger factor protein (TF) C-terminus ABAYE3290 PF00593 TonB dependent receptor ABAYE3290 PF07715 TonB-dependent Receptor Plug Domain ABAYE3291 PF18331 PKHD-type hydroxylase C-terminal domain ABAYE3291 PF13640 2OG-Fe(II) oxygenase superfamily ABAYE3292 PF00682 HMGL-like ABAYE3292 PF08502 LeuA allosteric (dimerisation) domain ABAYE3293 PF00561 alpha/beta hydrolase fold ABAYE3294 PF00561 alpha/beta hydrolase fold ABAYE3294 PF07021 Methionine biosynthesis protein MetW ABAYE3296 PF01725 Ham1 family ABAYE3298 PF02416 mttA/Hcf106 family ABAYE3299 PF02416 mttA/Hcf106 family ABAYE3300 PF00902 Sec-independent protein translocase protein (TatC) ABAYE3311 PF01790 Prolipoprotein diacylglyceryl transferase ABAYE3314 PF00303 Thymidylate synthase ABAYE3315 PF00186 Dihydrofolate reductase ABAYE3317 PF01625 Peptide methionine sulfoxide reductase ABAYE3319 PF01618 MotA/TolQ/ExbB proton channel family ABAYE3322 PF01842 ACT domain ABAYE3322 PF00551 Formyl transferase ABAYE3324 PF00171 Aldehyde dehydrogenase family ABAYE3325 PF00830 Ribosomal L28 family ABAYE3326 PF00471 Ribosomal protein L33 ABAYE3327 PF00999 Sodium/hydrogen exchanger family ABAYE3327 PF02254 TrkA-N domain ABAYE3331 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABAYE3332 PF00580 UvrD/REP helicase N-terminal domain ABAYE3332 PF13361 UvrD-like helicase C-terminal domain ABAYE3335 PF01396 Topoisomerase DNA binding C4 zinc finger ABAYE3335 PF01751 Toprim domain ABAYE3335 PF01131 DNA topoisomerase ABAYE3335 PF08272 Topoisomerase I zinc-ribbon-like ABAYE3337 PF01638 HxlR-like helix-turn-helix ABAYE3339 PF08240 Alcohol dehydrogenase GroES-like domain ABAYE3339 PF00107 Zinc-binding dehydrogenase ABAYE3342 PF01810 LysE type translocator ABAYE3343 PF03279 Bacterial lipid A biosynthesis acyltransferase ABAYE3346 PF00375 Sodium:dicarboxylate symporter family ABAYE3348 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABAYE3348 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABAYE3352 PF01416 tRNA pseudouridine synthase ABAYE3354 PF01176 Translation initiation factor 1A / IF-1 ABAYE3357 PF00180 Isocitrate/isopropylmalate dehydrogenase ABAYE3359 PF00694 Aconitase C-terminal domain ABAYE3360 PF00330 Aconitase family (aconitate hydratase) ABAYE3362 PF03466 LysR substrate binding domain ABAYE3362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3364 PF00293 NUDIX domain ABAYE3365 PF01590 GAF domain ABAYE3365 PF02896 PEP-utilising enzyme, TIM barrel domain ABAYE3365 PF00391 PEP-utilising enzyme, mobile domain ABAYE3365 PF05524 PEP-utilising enzyme, N-terminal ABAYE3366 PF00141 Peroxidase ABAYE3367 PF12706 Beta-lactamase superfamily domain ABAYE3369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3369 PF03466 LysR substrate binding domain ABAYE3371 PF02798 Glutathione S-transferase, N-terminal domain ABAYE3372 PF13280 WYL domain ABAYE3372 PF08279 HTH domain ABAYE3373 PF13419 Haloacid dehalogenase-like hydrolase ABAYE3374 PF01479 S4 domain ABAYE3374 PF00849 RNA pseudouridylate synthase ABAYE3375 PF00575 S1 RNA binding domain ABAYE3375 PF10150 Ribonuclease E/G family ABAYE3375 PF12111 Polyribonucleotide phosphorylase C terminal ABAYE3376 PF00501 AMP-binding enzyme ABAYE3376 PF13193 AMP-binding enzyme C-terminal domain ABAYE3377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3377 PF03466 LysR substrate binding domain ABAYE3378 PF00106 short chain dehydrogenase ABAYE3379 PF06969 HemN C-terminal domain ABAYE3379 PF04055 Radical SAM superfamily ABAYE3381 PF01554 MatE ABAYE3382 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE3382 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABAYE3382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE3383 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE3383 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABAYE3384 PF03109 ABC1 family ABAYE3385 PF01197 Ribosomal protein L31 ABAYE3387 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABAYE3391 PF03884 DNA gyrase inhibitor YacG ABAYE3392 PF00753 Metallo-beta-lactamase superfamily ABAYE3393 PF00762 Ferrochelatase ABAYE3395 PF01177 Asp/Glu/Hydantoin racemase ABAYE3399 PF01206 Sulfurtransferase TusA ABAYE3400 PF00571 CBS domain ABAYE3400 PF03471 Transporter associated domain ABAYE3401 PF00795 Carbon-nitrogen hydrolase ABAYE3402 PF01588 Putative tRNA binding domain ABAYE3405 PF07963 Prokaryotic N-terminal methylation motif ABAYE3405 PF08334 Type II secretion system (T2SS), protein G ABAYE3406 PF00482 Type II secretion system (T2SS), protein F ABAYE3407 PF00270 DEAD/DEAH box helicase ABAYE3407 PF18074 Primosomal protein N C-terminal domain ABAYE3407 PF00271 Helicase conserved C-terminal domain ABAYE3407 PF17764 3′ DNA-binding domain (3′BD) ABAYE3407 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABAYE3408 PF02254 TrkA-N domain ABAYE3408 PF00999 Sodium/hydrogen exchanger family ABAYE3409 PF01430 Hsp33 protein ABAYE3411 PF01556 DnaJ C terminal domain ABAYE3411 PF00226 DnaJ domain ABAYE3413 PF01544 CorA-like Mg2+ transporter protein ABAYE3414 PF00575 S1 RNA binding domain ABAYE3414 PF01138 3' exoribonuclease family, domain 1 ABAYE3414 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABAYE3414 PF00013 KH domain ABAYE3414 PF03725 3' exoribonuclease family, domain 2 ABAYE3415 PF00312 Ribosomal protein S15 ABAYE3418 PF13538 UvrD-like helicase C-terminal domain ABAYE3419 PF12705 PD-(D/E)XK nuclease superfamily ABAYE3419 PF00580 UvrD/REP helicase N-terminal domain ABAYE3419 PF13361 UvrD-like helicase C-terminal domain ABAYE3420 PF17946 RecC C-terminal domain ABAYE3422 PF03976 Polyphosphate kinase 2 (PPK2) ABAYE3424 PF01209 ubiE/COQ5 methyltransferase family ABAYE3426 PF03109 ABC1 family ABAYE3427 PF01494 FAD binding domain ABAYE3428 PF01502 Phosphoribosyl-AMP cyclohydrolase ABAYE3431 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABAYE3431 PF13244 Domain of unknown function (DUF4040) ABAYE3431 PF00361 Proton-conducting membrane transporter ABAYE3431 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABAYE3432 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABAYE3433 PF00361 Proton-conducting membrane transporter ABAYE3435 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABAYE3437 PF02033 Ribosome-binding factor A ABAYE3438 PF04760 Translation initiation factor IF-2, N-terminal region ABAYE3438 PF00009 Elongation factor Tu GTP binding domain ABAYE3438 PF11987 Translation-initiation factor 2 ABAYE3438 PF08364 Bacterial translation initiation factor IF-2 associated region ABAYE3439 PF13184 NusA-like KH domain ABAYE3439 PF08529 NusA N-terminal domain ABAYE3439 PF00575 S1 RNA binding domain ABAYE3440 PF02576 RimP N-terminal domain ABAYE3440 PF17384 RimP C-terminal SH3 domain ABAYE3442 PF03840 Preprotein translocase SecG subunit ABAYE3443 PF00121 Triosephosphate isomerase ABAYE3444 PF00437 Type II/IV secretion system protein ABAYE3444 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABAYE3445 PF00482 Type II secretion system (T2SS), protein F ABAYE3446 PF01478 Type IV leader peptidase family ABAYE3446 PF06750 Bacterial Peptidase A24 N-terminal domain ABAYE3447 PF01121 Dephospho-CoA kinase ABAYE3449 PF00588 SpoU rRNA Methylase family ABAYE3449 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABAYE3451 PF06865 Pyrimidine/purine nucleoside phosphorylase ABAYE3453 PF02463 RecF/RecN/SMC N terminal domain ABAYE3454 PF02622 Uncharacterized ACR, COG1678 ABAYE3455 PF03652 Holliday junction resolvase ABAYE3456 PF13533 Biotin-lipoyl like ABAYE3462 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABAYE3462 PF02805 Metal binding domain of Ada ABAYE3462 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABAYE3462 PF12833 Helix-turn-helix domain ABAYE3463 PF01066 CDP-alcohol phosphatidyltransferase ABAYE3465 PF02151 UvrB/uvrC motif ABAYE3465 PF01541 GIY-YIG catalytic domain ABAYE3465 PF08459 UvrC Helix-hairpin-helix N-terminal ABAYE3470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABAYE3470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABAYE3470 PF00378 Enoyl-CoA hydratase/isomerase ABAYE3471 PF00108 Thiolase, N-terminal domain ABAYE3471 PF02803 Thiolase, C-terminal domain ABAYE3474 PF09278 MerR, DNA binding ABAYE3474 PF00376 MerR family regulatory protein ABAYE3476 PF01323 DSBA-like thioredoxin domain ABAYE3480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3480 PF00183 Hsp90 protein ABAYE3483 PF03553 Na+/H+ antiporter family ABAYE3483 PF13726 Na+-H+ antiporter family ABAYE3488 PF04997 RNA polymerase Rpb1, domain 1 ABAYE3488 PF00623 RNA polymerase Rpb1, domain 2 ABAYE3488 PF04983 RNA polymerase Rpb1, domain 3 ABAYE3488 PF05000 RNA polymerase Rpb1, domain 4 ABAYE3488 PF04998 RNA polymerase Rpb1, domain 5 ABAYE3489 PF04563 RNA polymerase beta subunit ABAYE3489 PF04561 RNA polymerase Rpb2, domain 2 ABAYE3489 PF04565 RNA polymerase Rpb2, domain 3 ABAYE3489 PF10385 RNA polymerase beta subunit external 1 domain ABAYE3489 PF00562 RNA polymerase Rpb2, domain 6 ABAYE3489 PF04560 RNA polymerase Rpb2, domain 7 ABAYE3490 PF00542 Ribosomal protein L7/L12 C-terminal domain ABAYE3490 PF16320 Ribosomal protein L7/L12 dimerisation domain ABAYE3491 PF00466 Ribosomal protein L10 ABAYE3492 PF00687 Ribosomal protein L1p/L10e family ABAYE3493 PF00298 Ribosomal protein L11, RNA binding domain ABAYE3493 PF03946 Ribosomal protein L11, N-terminal domain ABAYE3494 PF02357 Transcription termination factor nusG ABAYE3494 PF00467 KOW motif ABAYE3495 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABAYE3496 PF03143 Elongation factor Tu C-terminal domain ABAYE3496 PF00009 Elongation factor Tu GTP binding domain ABAYE3496 PF03144 Elongation factor Tu domain 2 ABAYE3497 PF00425 chorismate binding enzyme ABAYE3497 PF04715 Anthranilate synthase component I, N terminal region ABAYE3498 PF13419 Haloacid dehalogenase-like hydrolase ABAYE3499 PF12401 Protein of unknown function (DUF2662) ABAYE3499 PF00498 FHA domain ABAYE3500 PF00263 Bacterial type II and III secretion system protein ABAYE3500 PF03958 Bacterial type II/III secretion system short domain ABAYE3503 PF00816 H-NS histone family ABAYE3508 PF03900 Porphobilinogen deaminase, C-terminal domain ABAYE3508 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABAYE3509 PF00072 Response regulator receiver domain ABAYE3509 PF04397 LytTr DNA-binding domain ABAYE3510 PF06580 Histidine kinase ABAYE3510 PF07694 5TMR of 5TMR-LYT ABAYE3510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3511 PF00206 Lyase ABAYE3511 PF14698 Argininosuccinate lyase C-terminal ABAYE3512 PF04362 Bacterial Fe(2+) trafficking ABAYE3513 PF01895 PhoU domain ABAYE3514 PF02321 Outer membrane efflux protein ABAYE3515 PF00892 EamA-like transporter family ABAYE3518 PF13667 ThiC-associated domain ABAYE3518 PF01964 Radical SAM ThiC family ABAYE3519 PF00293 NUDIX domain ABAYE3520 PF00149 Calcineurin-like phosphoesterase ABAYE3521 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABAYE3522 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABAYE3523 PF01098 Cell cycle protein ABAYE3524 PF08245 Mur ligase middle domain ABAYE3524 PF02875 Mur ligase family, glutamate ligase domain ABAYE3526 PF02421 Ferrous iron transport protein B ABAYE3526 PF07670 Nucleoside recognition ABAYE3526 PF07664 Ferrous iron transport protein B C terminus ABAYE3528 PF00589 Phage integrase family ABAYE3528 PF02899 Phage integrase, N-terminal SAM-like domain ABAYE3529 PF13098 Thioredoxin-like domain ABAYE3529 PF10411 Disulfide bond isomerase protein N-terminus ABAYE3530 PF03447 Homoserine dehydrogenase, NAD binding domain ABAYE3530 PF00742 Homoserine dehydrogenase ABAYE3530 PF01842 ACT domain ABAYE3531 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE3532 PF00768 D-alanyl-D-alanine carboxypeptidase ABAYE3533 PF00072 Response regulator receiver domain ABAYE3533 PF00196 Bacterial regulatory proteins, luxR family ABAYE3534 PF00512 His Kinase A (phospho-acceptor) domain ABAYE3534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABAYE3535 PF00158 Sigma-54 interaction domain ABAYE3535 PF00072 Response regulator receiver domain ABAYE3535 PF02954 Bacterial regulatory protein, Fis family ABAYE3536 PF00595 PDZ domain ABAYE3536 PF03572 Peptidase family S41 ABAYE3537 PF01676 Metalloenzyme superfamily ABAYE3537 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABAYE3538 PF03739 Lipopolysaccharide export system permease LptF/LptG ABAYE3540 PF00883 Cytosol aminopeptidase family, catalytic domain ABAYE3540 PF02789 Cytosol aminopeptidase family, N-terminal domain ABAYE3544 PF00677 Lumazine binding domain ABAYE3546 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABAYE3546 PF01872 RibD C-terminal domain ABAYE3547 PF03477 ATP cone domain ABAYE3548 PF00909 Ammonium Transporter Family ABAYE3549 PF00543 Nitrogen regulatory protein P-II ABAYE3553 PF00916 Sulfate permease family ABAYE3553 PF01740 STAS domain ABAYE3558 PF01252 Signal peptidase (SPase) II ABAYE3560 PF13411 MerR HTH family regulatory protein ABAYE3568 PF00809 Pterin binding enzyme ABAYE3569 PF00893 Small Multidrug Resistance protein ABAYE3570 PF13427 Domain of unknown function (DUF4111) ABAYE3570 PF01909 Nucleotidyltransferase domain ABAYE3573 PF00583 Acetyltransferase (GNAT) family ABAYE3575 PF13495 Phage integrase, N-terminal SAM-like domain ABAYE3575 PF00589 Phage integrase family ABAYE3576 PF13610 DDE domain ABAYE3578 PF01636 Phosphotransferase enzyme family ABAYE3580 PF13610 DDE domain ABAYE3581 PF00239 Resolvase, N terminal domain ABAYE3581 PF02796 Helix-turn-helix domain of resolvase ABAYE3582 PF13700 Domain of unknown function (DUF4158) ABAYE3582 PF01526 Tn3 transposase DDE domain ABAYE3583_1 PF13610 DDE domain ABAYE3584 PF13700 Domain of unknown function (DUF4158) ABAYE3584 PF01526 Tn3 transposase DDE domain ABAYE3587 PF00302 Chloramphenicol acetyltransferase ABAYE3596 PF00892 EamA-like transporter family ABAYE3597 PF07690 Major Facilitator Superfamily ABAYE3598 PF02909 Tetracyclin repressor-like, C-terminal domain ABAYE3598 PF00440 Bacterial regulatory proteins, tetR family ABAYE3601 PF00376 MerR family regulatory protein ABAYE3601 PF09278 MerR, DNA binding ABAYE3604 PF03203 MerC mercury resistance protein ABAYE3605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABAYE3605 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE3605 PF00403 Heavy-metal-associated domain ABAYE3606 PF13411 MerR HTH family regulatory protein ABAYE3607 PF05052 MerE protein ABAYE3612 PF00809 Pterin binding enzyme ABAYE3613 PF00893 Small Multidrug Resistance protein ABAYE3614 PF00186 Dihydrofolate reductase ABAYE3616 PF00809 Pterin binding enzyme ABAYE3617 PF00893 Small Multidrug Resistance protein ABAYE3618 PF13427 Domain of unknown function (DUF4111) ABAYE3618 PF01909 Nucleotidyltransferase domain ABAYE3619 PF00905 Penicillin binding protein transpeptidase domain ABAYE3620 PF07690 Major Facilitator Superfamily ABAYE3622 PF10706 Aminoglycoside-2''-adenylyltransferase ABAYE3627 PF13495 Phage integrase, N-terminal SAM-like domain ABAYE3627 PF00589 Phage integrase family ABAYE3629 PF00270 DEAD/DEAH box helicase ABAYE3629 PF00271 Helicase conserved C-terminal domain ABAYE3629 PF17191 RecG wedge domain ABAYE3630 PF01636 Phosphotransferase enzyme family ABAYE3633 PF00589 Phage integrase family ABAYE3633 PF13495 Phage integrase, N-terminal SAM-like domain ABAYE3637 PF07690 Major Facilitator Superfamily ABAYE3639 PF00440 Bacterial regulatory proteins, tetR family ABAYE3639 PF02909 Tetracyclin repressor-like, C-terminal domain ABAYE3640 PF07690 Major Facilitator Superfamily ABAYE3642 PF00893 Small Multidrug Resistance protein ABAYE3644 PF00186 Dihydrofolate reductase ABAYE3646 PF13495 Phage integrase, N-terminal SAM-like domain ABAYE3646 PF00589 Phage integrase family ABAYE3647 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ABAYE3648 PF01636 Phosphotransferase enzyme family ABAYE3651 PF01252 Signal peptidase (SPase) II ABAYE3654 PF13411 MerR HTH family regulatory protein ABAYE3655 PF00582 Universal stress protein family ABAYE3656 PF03960 ArsC family ABAYE3657 PF01022 Bacterial regulatory protein, arsR family ABAYE3659 PF01758 Sodium Bile acid symporter family ABAYE3660 PF03358 NADPH-dependent FMN reductase ABAYE3661 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABAYE3666 PF00665 Integrase core domain ABAYE3669 PF00155 Aminotransferase class I and II ABAYE3669 PF00392 Bacterial regulatory proteins, gntR family ABAYE3671 PF00701 Dihydrodipicolinate synthetase family ABAYE3674 PF03573 outer membrane porin, OprD family ABAYE3675 PF00719 Inorganic pyrophosphatase ABAYE3678 PF00501 AMP-binding enzyme ABAYE3678 PF13193 AMP-binding enzyme C-terminal domain ABAYE3679 PF03989 DNA gyrase C-terminal domain, beta-propeller ABAYE3679 PF00521 DNA gyrase/topoisomerase IV, subunit A ABAYE3680 PF07690 Major Facilitator Superfamily ABAYE3681 PF03458 UPF0126 domain ABAYE3682 PF02810 SEC-C motif ABAYE3683 PF03741 Integral membrane protein TerC family ABAYE3683 PF03471 Transporter associated domain ABAYE3684 PF03641 Possible lysine decarboxylase ABAYE3685 PF07690 Major Facilitator Superfamily ABAYE3687 PF00817 impB/mucB/samB family ABAYE3687 PF11798 IMS family HHH motif ABAYE3687 PF11799 impB/mucB/samB family C-terminal domain ABAYE3690 PF11842 Domain of unknown function (DUF3362) ABAYE3690 PF08497 Radical SAM N-terminal ABAYE3690 PF04055 Radical SAM superfamily ABAYE3694 PF03358 NADPH-dependent FMN reductase ABAYE3696 PF00291 Pyridoxal-phosphate dependent enzyme ABAYE3700 PF00440 Bacterial regulatory proteins, tetR family ABAYE3705 PF01327 Polypeptide deformylase ABAYE3707 PF02481 DNA recombination-mediator protein A ABAYE3707 PF17782 DprA winged helix domain ABAYE3708 PF01300 Telomere recombination ABAYE3709 PF00892 EamA-like transporter family ABAYE3710 PF00440 Bacterial regulatory proteins, tetR family ABAYE3711 PF07690 Major Facilitator Superfamily ABAYE3713 PF00255 Glutathione peroxidase ABAYE3715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABAYE3716 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABAYE3716 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABAYE3717 PF00231 ATP synthase ABAYE3718 PF00306 ATP synthase alpha/beta chain, C terminal domain ABAYE3718 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABAYE3718 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABAYE3719 PF00213 ATP synthase delta (OSCP) subunit ABAYE3720 PF00430 ATP synthase B/B' CF(0) ABAYE3721 PF00137 ATP synthase subunit C ABAYE3723 PF00119 ATP synthase A chain ABAYE3727 PF00005 ABC transporter ABAYE3728 PF00950 ABC 3 transport family ABAYE3729 PF01810 LysE type translocator ABAYE3730 PF04261 Dyp-type peroxidase family ABAYE3731 PF03949 Malic enzyme, NAD binding domain ABAYE3731 PF00390 Malic enzyme, N-terminal domain ABAYE3732 PF03485 Arginyl tRNA synthetase N terminal domain ABAYE3732 PF05746 DALR anticodon binding domain ABAYE3732 PF00750 tRNA synthetases class I (R) ABAYE3736 PF02678 Pirin ABAYE3736 PF05726 Pirin C-terminal cupin domain ABAYE3738 PF03551 Transcriptional regulator PadR-like family ABAYE3739 PF13427 Domain of unknown function (DUF4111) ABAYE3739 PF01909 Nucleotidyltransferase domain ABAYE3740 PF00117 Glutamine amidotransferase class-I ABAYE3740 PF00958 GMP synthase C terminal domain ABAYE3740 PF02540 NAD synthase ABAYE3741 PF04286 Protein of unknown function (DUF445) ABAYE3742 PF07681 DoxX ABAYE3743 PF09335 SNARE associated Golgi protein ABAYE3746 PF13614 AAA domain ABAYE3748 PF01722 BolA-like protein ABAYE3750 PF01648 4'-phosphopantetheinyl transferase superfamily ABAYE3751 PF12697 Alpha/beta hydrolase family ABAYE3754 PF00975 Thioesterase domain ABAYE3754 PF00550 Phosphopantetheine attachment site ABAYE3754 PF00668 Condensation domain ABAYE3754 PF13193 AMP-binding enzyme C-terminal domain ABAYE3754 PF00501 AMP-binding enzyme ABAYE3755 PF13193 AMP-binding enzyme C-terminal domain ABAYE3755 PF00550 Phosphopantetheine attachment site ABAYE3755 PF08659 KR domain ABAYE3755 PF02801 Beta-ketoacyl synthase, C-terminal domain ABAYE3755 PF00109 Beta-ketoacyl synthase, N-terminal domain ABAYE3755 PF16197 Ketoacyl-synthetase C-terminal extension ABAYE3755 PF00501 AMP-binding enzyme ABAYE3755 PF00668 Condensation domain ABAYE3755 PF14765 Polyketide synthase dehydratase ABAYE3756 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE3756 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE3756 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE3757 PF00501 AMP-binding enzyme ABAYE3758 PF00196 Bacterial regulatory proteins, luxR family ABAYE3758 PF03472 Autoinducer binding domain ABAYE3761 PF00765 Autoinducer synthase ABAYE3762 PF07690 Major Facilitator Superfamily ABAYE3762 PF00083 Sugar (and other) transporter ABAYE3763 PF00378 Enoyl-CoA hydratase/isomerase ABAYE3764 PF00378 Enoyl-CoA hydratase/isomerase ABAYE3765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABAYE3765 PF02770 Acyl-CoA dehydrogenase, middle domain ABAYE3765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABAYE3766 PF00501 AMP-binding enzyme ABAYE3766 PF13193 AMP-binding enzyme C-terminal domain ABAYE3767 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABAYE3767 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABAYE3768 PF00171 Aldehyde dehydrogenase family ABAYE3770 PF00324 Amino acid permease ABAYE3771 PF00324 Amino acid permease ABAYE3772 PF01042 Endoribonuclease L-PSP ABAYE3773 PF01168 Alanine racemase, N-terminal domain ABAYE3773 PF00842 Alanine racemase, C-terminal domain ABAYE3774 PF01266 FAD dependent oxidoreductase ABAYE3775 PF01037 Lrp/AsnC ligand binding domain ABAYE3777 PF00593 TonB dependent receptor ABAYE3777 PF07715 TonB-dependent Receptor Plug Domain ABAYE3780 PF00849 RNA pseudouridylate synthase ABAYE3787 PF00293 NUDIX domain ABAYE3791 PF00694 Aconitase C-terminal domain ABAYE3791 PF00330 Aconitase family (aconitate hydratase) ABAYE3792 PF00285 Citrate synthase, C-terminal domain ABAYE3794 PF00392 Bacterial regulatory proteins, gntR family ABAYE3794 PF07729 FCD domain ABAYE3795 PF00155 Aminotransferase class I and II ABAYE3796 PF09330 D-lactate dehydrogenase, membrane binding ABAYE3796 PF01565 FAD binding domain ABAYE3797 PF01070 FMN-dependent dehydrogenase ABAYE3798 PF00392 Bacterial regulatory proteins, gntR family ABAYE3798 PF07729 FCD domain ABAYE3799 PF02652 L-lactate permease ABAYE3800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABAYE3800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABAYE3800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABAYE3800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABAYE3801 PF00342 Phosphoglucose isomerase ABAYE3802 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABAYE3802 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABAYE3802 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABAYE3803 PF00483 Nucleotidyl transferase ABAYE3804 PF02719 Polysaccharide biosynthesis protein ABAYE3806 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABAYE3807 PF00132 Bacterial transferase hexapeptide (six repeats) ABAYE3807 PF14602 Hexapeptide repeat of succinyl-transferase ABAYE3807 PF17836 PglD N-terminal domain ABAYE3808 PF02397 Bacterial sugar transferase ABAYE3809 PF13477 Glycosyl transferase 4-like ABAYE3809 PF00534 Glycosyl transferases group 1 ABAYE3810 PF01757 Acyltransferase family ABAYE3810 PF00842 Alanine racemase, C-terminal domain ABAYE3810 PF01168 Alanine racemase, N-terminal domain ABAYE3812 PF00534 Glycosyl transferases group 1 ABAYE3812 PF13439 Glycosyltransferase Family 4 ABAYE3814 PF01370 NAD dependent epimerase/dehydratase family ABAYE3815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABAYE3815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABAYE3815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABAYE3816 PF10531 SLBB domain ABAYE3816 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABAYE3816 PF02563 Polysaccharide biosynthesis/export protein ABAYE3817 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABAYE3818 PF02706 Chain length determinant protein ABAYE3818 PF13614 AAA domain ABAYE3818 PF13807 G-rich domain on putative tyrosine kinase ABAYE3819 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABAYE3819 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE3820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE3820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABAYE3821 PF03023 Lipid II flippase MurJ ABAYE3822 PF01510 N-acetylmuramoyl-L-alanine amidase ABAYE3823 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABAYE3823 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABAYE3825 PF05506 Domain of unknown function (DUF756) ABAYE3825 PF04185 Phosphoesterase family ABAYE3828 PF03725 3' exoribonuclease family, domain 2 ABAYE3828 PF01138 3' exoribonuclease family, domain 1 ABAYE3829 PF00487 Fatty acid desaturase ABAYE3830 PF00175 Oxidoreductase NAD-binding domain ABAYE3831 PF00440 Bacterial regulatory proteins, tetR family ABAYE3832 PF08360 QacR-like protein, C-terminal region ABAYE3832 PF00440 Bacterial regulatory proteins, tetR family ABAYE3833 PF01323 DSBA-like thioredoxin domain ABAYE3835 PF13419 Haloacid dehalogenase-like hydrolase ABAYE3836 PF00106 short chain dehydrogenase ABAYE3839 PF00696 Amino acid kinase family ABAYE3839 PF00583 Acetyltransferase (GNAT) family ABAYE3840 PF09084 NMT1/THI5 like ABAYE3841 PF09084 NMT1/THI5 like ABAYE3842 PF00296 Luciferase-like monooxygenase ABAYE3843 PF00528 Binding-protein-dependent transport system inner membrane component ABAYE3844 PF00005 ABC transporter ABAYE3845 PF08362 YcdC-like protein, C-terminal region ABAYE3845 PF00440 Bacterial regulatory proteins, tetR family ABAYE3846 PF01048 Phosphorylase superfamily ABAYE3851 PF06574 FAD synthetase ABAYE3851 PF01687 Riboflavin kinase ABAYE3852 PF08264 Anticodon-binding domain of tRNA ABAYE3852 PF06827 Zinc finger found in FPG and IleRS ABAYE3852 PF00133 tRNA synthetases class I (I, L, M and V) ABAYE3853 PF01252 Signal peptidase (SPase) II ABAYE3854 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABAYE3858 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABAYE3859 PF07859 alpha/beta hydrolase fold ABAYE3863 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABAYE3863 PF03466 LysR substrate binding domain ABAYE3864 PF01025 GrpE ABAYE3865 PF00012 Hsp70 protein ABAYE3869 PF13406 Transglycosylase SLT domain ABAYE3871 PF02222 ATP-grasp domain ABAYE3871 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABAYE3872 PF00731 AIR carboxylase ABAYE3877 PF02875 Mur ligase family, glutamate ligase domain ABAYE3877 PF08245 Mur ligase middle domain ABAYE3877 PF01225 Mur ligase family, catalytic domain ABAYE3879 PF01569 PAP2 superfamily ABAYE3881 PF03741 Integral membrane protein TerC family ABAYE3883 PF03738 Glutathionylspermidine synthase preATP-grasp ABAYE3884 PF00355 Rieske [2Fe-2S] domain ABAYE3885 PF01979 Amidohydrolase family ABAYE3887 PF00156 Phosphoribosyl transferase domain ABAYE3889 PF13098 Thioredoxin-like domain ABAYE3889 PF10411 Disulfide bond isomerase protein N-terminus ABAYE3897 PF16916 Dimerisation domain of Zinc Transporter ABAYE3897 PF01545 Cation efflux family ABAYE3898 PF02583 Metal-sensitive transcriptional repressor ABAYE3899 PF12631 MnmE helical domain ABAYE3899 PF10396 GTP-binding protein TrmE N-terminus ABAYE3899 PF01926 50S ribosome-binding GTPase ABAYE3900 PF02096 60Kd inner membrane protein ABAYE3900 PF14849 YidC periplasmic domain ABAYE3901 PF01809 Putative membrane protein insertion efficiency factor ABAYE3902 PF00825 Ribonuclease P ABAYE3903 PF00468 Ribosomal protein L34 p1ABAYE0005 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system p1ABAYE0007 PF03389 MobA/MobL family p2ABAYE0004 PF08240 Alcohol dehydrogenase GroES-like domain p2ABAYE0004 PF13823 Alcohol dehydrogenase GroES-associated p2ABAYE0004 PF00107 Zinc-binding dehydrogenase p2ABAYE0008 PF07715 TonB-dependent Receptor Plug Domain p2ABAYE0008 PF00593 TonB dependent receptor p3ABAYE0005 PF17755 UvrA DNA-binding domain p3ABAYE0008 PF08240 Alcohol dehydrogenase GroES-like domain p3ABAYE0008 PF00107 Zinc-binding dehydrogenase p3ABAYE0009 PF13737 Transposase DDE domain p3ABAYE0012 PF13356 Arm DNA-binding domain p3ABAYE0012 PF00589 Phage integrase family p3ABAYE0013 PF04151 Bacterial pre-peptidase C-terminal domain p3ABAYE0015 PF16884 N-terminal domain of oxidoreductase p3ABAYE0015 PF00107 Zinc-binding dehydrogenase p3ABAYE0016 PF16925 Tetracyclin repressor-like, C-terminal domain p3ABAYE0016 PF00440 Bacterial regulatory proteins, tetR family p3ABAYE0018 PF00724 NADH:flavin oxidoreductase / NADH oxidase family p3ABAYE0020 PF00465 Iron-containing alcohol dehydrogenase p3ABAYE0023 PF00756 Putative esterase p3ABAYE0024 PF08240 Alcohol dehydrogenase GroES-like domain p3ABAYE0024 PF00107 Zinc-binding dehydrogenase p3ABAYE0025 PF02583 Metal-sensitive transcriptional repressor p3ABAYE0028 PF12833 Helix-turn-helix domain p3ABAYE0028 PF01965 DJ-1/PfpI family p3ABAYE0029 PF00557 Metallopeptidase family M24 p3ABAYE0029 PF01321 Creatinase/Prolidase N-terminal domain p3ABAYE0030 PF00083 Sugar (and other) transporter p3ABAYE0030 PF08946 Osmosensory transporter coiled coil p3ABAYE0031 PF00892 EamA-like transporter family p3ABAYE0035 PF02801 Beta-ketoacyl synthase, C-terminal domain p3ABAYE0035 PF00109 Beta-ketoacyl synthase, N-terminal domain p3ABAYE0035 PF08659 KR domain p3ABAYE0035 PF00550 Phosphopantetheine attachment site p3ABAYE0035 PF14765 Polyketide synthase dehydratase p3ABAYE0035 PF08240 Alcohol dehydrogenase GroES-like domain p3ABAYE0035 PF00698 Acyl transferase domain p3ABAYE0035 PF16197 Ketoacyl-synthetase C-terminal extension p3ABAYE0036 PF00107 Zinc-binding dehydrogenase p3ABAYE0036 PF08240 Alcohol dehydrogenase GroES-like domain p3ABAYE0037 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family p3ABAYE0037 PF03466 LysR substrate binding domain p3ABAYE0038 PF00106 short chain dehydrogenase p3ABAYE0039 PF08240 Alcohol dehydrogenase GroES-like domain p3ABAYE0039 PF00107 Zinc-binding dehydrogenase p3ABAYE0046 PF04221 RelB antitoxin p3ABAYE0049 PF05973 Phage derived protein Gp49-like (DUF891) p3ABAYE0055 PF05973 Phage derived protein Gp49-like (DUF891) p3ABAYE0064 PF01527 Transposase p3ABAYE0065 PF13087 AAA domain p3ABAYE0065 PF13195 Protein of unknown function (DUF4011) p3ABAYE0065 PF13086 AAA domain p3ABAYE0065 PF13087 AAA domain p3ABAYE0065 PF13195 Protein of unknown function (DUF4011) p3ABAYE0065 PF13086 AAA domain p3ABAYE0079 PF13737 Transposase DDE domain p3ABAYE0084 PF05973 Phage derived protein Gp49-like (DUF891) p3ABAYE0112 PF02195 ParB-like nuclease domain p3ABAYE0112 PF17762 HTH domain found in ParB protein p3ABAYE0113 PF13614 AAA domain