locus-tag	class	description
ABAYE0002	COG0592	DNA-directed DNA polymerase activity
ABAYE0004	COG0187	DNA topoisomerase II activity
ABAYE0006	COG0586	Pfam SNARE associated Golgi protein
ABAYE0007	COG0488	(ABC) transporter
ABAYE0012	COG0596	Alpha beta hydrolase
ABAYE0013	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABAYE0014	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABAYE0019	COG0733	neurotransmitter:sodium symporter activity
ABAYE0026	COG0583	DNA-binding transcription factor activity
ABAYE0027	COG2233	PERMEase
ABAYE0030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE0038	COG2814	Major facilitator Superfamily
ABAYE0039	COG0656	L-ascorbic acid biosynthetic process
ABAYE0040	COG0583	DNA-binding transcription factor activity
ABAYE0042	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAYE0043	COG1064	alcohol dehydrogenase
ABAYE0044	COG2818	Glycosylase
ABAYE0047	COG1194	a g-specific adenine glycosylase
ABAYE0051	COG2983	Belongs to the UPF0260 family
ABAYE0052	COG2133	pyrroloquinoline quinone binding
ABAYE0053	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABAYE0054	COG2116	formate transmembrane transporter activity
ABAYE0058	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABAYE0059	COG1335	isochorismatase
ABAYE0060	COG0385	Bile acid
ABAYE0061	COG0534	Mate efflux family protein
ABAYE0062	COG1683	Conserved Protein
ABAYE0067	COG0625	glutathione transferase activity
ABAYE0069	COG1113	amino acid transport
ABAYE0071	COG0523	cobalamin synthesis protein
ABAYE0073	COG2188	Transcriptional regulator
ABAYE0079	COG0010	Belongs to the arginase family
ABAYE0082	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABAYE0089	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABAYE0091	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABAYE0093	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABAYE0110	COG0534	Mate efflux family protein
ABAYE0111	COG0436	Aminotransferase
ABAYE0112	COG2733	membrane
ABAYE0116	COG2918	glutathione biosynthetic process
ABAYE0118	COG3501	Rhs element vgr protein
ABAYE0119	COG1388	LysM domain
ABAYE0119	COG3409	Peptidoglycan-binding domain 1 protein
ABAYE0119	COG5632	N-Acetylmuramoyl-L-alanine amidase
ABAYE0125	COG3150	esterase
ABAYE0127	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABAYE0129	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAYE0131	COG2233	PERMEase
ABAYE0132	COG2351	hydroxyisourate hydrolase activity
ABAYE0139	COG3706	GGDEF domain
ABAYE0142	COG1393	Belongs to the ArsC family
ABAYE0143	COG0708	Exodeoxyribonuclease III
ABAYE0147	COG0189	ligase activity
ABAYE0151	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABAYE0153	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABAYE0156	COG4942	peptidase
ABAYE0158	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABAYE0161	COG2119	membrane
ABAYE0164	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE0164	COG0426	domain, Protein
ABAYE0169	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABAYE0174	COG1902	pentaerythritol trinitrate reductase activity
ABAYE0175	COG1519	Transferase
ABAYE0176	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABAYE0177	COG0668	transmembrane transport
ABAYE0179	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAYE0180	COG1335	isochorismatase
ABAYE0181	COG1522	sequence-specific DNA binding
ABAYE0186	COG2205	protein histidine kinase activity
ABAYE0186	COG2198	Histidine kinase
ABAYE0186	COG0784	Response regulator, receiver
ABAYE0187	COG3162	membrane
ABAYE0188	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABAYE0190	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABAYE0194	COG3706	GGDEF domain
ABAYE0195	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABAYE0196	COG1309	transcriptional regulator
ABAYE0200	COG0351	phosphomethylpyrimidine kinase
ABAYE0200	COG0352	thiamine-phosphate diphosphorylase activity
ABAYE0200	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABAYE0202	COG2814	Major facilitator Superfamily
ABAYE0205	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABAYE0207	COG1113	amino acid transport
ABAYE0209	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABAYE0210	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE0212	COG1335	isochorismatase
ABAYE0217	COG2814	Major facilitator Superfamily
ABAYE0218	COG0583	DNA-binding transcription factor activity
ABAYE0222	COG0667	Aldo Keto reductase
ABAYE0227	COG1733	regulation of RNA biosynthetic process
ABAYE0230	COG1733	regulation of RNA biosynthetic process
ABAYE0231	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABAYE0233	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABAYE0244	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABAYE0253	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABAYE0257	COG0427	acetyl-CoA hydrolase
ABAYE0259	COG0745	RESPONSE REGULATOR receiver
ABAYE0262	COG0659	secondary active sulfate transmembrane transporter activity
ABAYE0263	COG4221	oxidoreductase activity
ABAYE0265	COG0488	(ABC) transporter
ABAYE0276	COG0833	amino acid
ABAYE0283	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABAYE0284	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABAYE0287	COG2226	methyltransferase
ABAYE0298	COG0067	glutamate synthase
ABAYE0298	COG0069	glutamate synthase activity
ABAYE0298	COG0070	glutamate synthase
ABAYE0299	COG0493	'glutamate synthase
ABAYE0301	COG1704	LemA family
ABAYE0302	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABAYE0306	COG3307	-O-antigen
ABAYE0310	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABAYE0312	COG0194	GDP metabolic process
ABAYE0322	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABAYE0326	COG5380	lipid catabolic process
ABAYE0327	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABAYE0332	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABAYE0333	COG0277	FAD linked oxidase domain protein
ABAYE0335	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABAYE0336	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABAYE0339	COG1289	transmembrane transporter activity
ABAYE0342	COG0628	permease
ABAYE0343	COG1192	Involved in chromosome partitioning
ABAYE0349	COG0833	amino acid
ABAYE0351	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABAYE0352	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABAYE0354	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE0362	COG0583	DNA-binding transcription factor activity
ABAYE0372	COG0517	IMP dehydrogenase activity
ABAYE0373	COG1983	PspC domain protein
ABAYE0375	COG1960	acyl-CoA dehydrogenase activity
ABAYE0378	COG0408	coproporphyrinogen oxidase activity
ABAYE0383	COG0513	Belongs to the DEAD box helicase family
ABAYE0385	COG1127	ABC transporter
ABAYE0386	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABAYE0388	COG2854	intermembrane phospholipid transfer
ABAYE0390	COG0598	Magnesium transport protein CorA
ABAYE0392	COG0494	nUDIX hydrolase
ABAYE0393	COG1040	competence protein
ABAYE0394	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABAYE0398	COG1946	Acyl-CoA thioesterase
ABAYE0399	COG1301	dicarboxylic acid transport
ABAYE0402	COG1959	2 iron, 2 sulfur cluster binding
ABAYE0403	COG1017	nitric oxide dioxygenase activity
ABAYE0403	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABAYE0404	COG0433	COG0433 Predicted ATPase
ABAYE0405	COG0626	cystathionine gamma-synthase activity
ABAYE0429	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABAYE0431	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABAYE0436	COG1960	acyl-CoA dehydrogenase activity
ABAYE0437	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABAYE0443	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABAYE0444	COG0339	signal peptide processing
ABAYE0445	COG0557	exoribonuclease II activity
ABAYE0451	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABAYE0452	COG2169	Transcriptional regulator
ABAYE0453	COG0697	spore germination
ABAYE0454	COG1295	ribonuclease BN
ABAYE0461	COG1702	phosphate starvation-inducible protein PhoH
ABAYE0463	COG0741	lytic transglycosylase activity
ABAYE0463	COG0739	heme binding
ABAYE0463	COG1196	nuclear chromosome segregation
ABAYE0469	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABAYE0470	COG1183	phosphatidylcholine synthase activity
ABAYE0476	COG1960	acyl-CoA dehydrogenase activity
ABAYE0477	COG1309	transcriptional regulator
ABAYE0480	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABAYE0481	COG1960	acyl-CoA dehydrogenase activity
ABAYE0485	COG2969	positive regulation of protein catabolic process
ABAYE0487	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABAYE0490	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABAYE0491	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABAYE0495	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABAYE0498	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABAYE0499	COG1408	metallophosphoesterase
ABAYE0501	COG2199	diguanylate cyclase activity
ABAYE0507	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABAYE0507	COG3453	Protein conserved in bacteria
ABAYE0513	COG1607	acyl-coa hydrolase
ABAYE0519	COG2350	Protein conserved in bacteria
ABAYE0521	COG0613	PHP domain protein
ABAYE0522	COG3781	membrane
ABAYE0524	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABAYE0527	COG1862	Preprotein translocase
ABAYE0535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABAYE0536	COG0629	single-stranded DNA binding
ABAYE0545	COG3646	Phage regulatory protein
ABAYE0548	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABAYE0574	COG4695	Portal protein
ABAYE0575	COG2205	protein histidine kinase activity
ABAYE0576	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABAYE0580	COG0726	polysaccharide deacetylase
ABAYE0581	COG0463	Glycosyl transferase, family 2
ABAYE0582	COG0438	transferase activity, transferring glycosyl groups
ABAYE0596	COG1960	acyl-CoA dehydrogenase activity
ABAYE0597	COG1960	acyl-CoA dehydrogenase activity
ABAYE0599	COG2205	protein histidine kinase activity
ABAYE0600	COG0745	RESPONSE REGULATOR receiver
ABAYE0601	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABAYE0605	COG2096	Adenosyltransferase
ABAYE0608	COG0133	tryptophan synthase activity
ABAYE0615	COG0285	dihydrofolate synthase activity
ABAYE0619	COG0450	alkyl hydroperoxide reductase
ABAYE0622	COG0477	Major facilitator Superfamily
ABAYE0623	COG1272	protein, Hemolysin III
ABAYE0625	COG2153	protein acetylation
ABAYE0629	COG0183	Belongs to the thiolase family
ABAYE0630	COG2207	Transcriptional regulator
ABAYE0634	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAYE0638	COG0183	Belongs to the thiolase family
ABAYE0640	COG2885	chlorophyll binding
ABAYE0640	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABAYE0642	COG1690	Belongs to the RtcB family
ABAYE0643	COG0833	amino acid
ABAYE0645	COG2233	PERMEase
ABAYE0651	COG2094	Belongs to the DNA glycosylase MPG family
ABAYE0653	COG4772	TonB-dependent receptor
ABAYE0654	COG1902	pentaerythritol trinitrate reductase activity
ABAYE0657	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABAYE0658	COG0354	folic acid binding
ABAYE0660	COG3189	MarR family transcriptional regulator
ABAYE0661	COG2824	Alkylphosphonate utilization operon protein PhnA
ABAYE0662	COG3422	double-strand break repair
ABAYE0670	COG0840	transmembrane signaling receptor activity
ABAYE0674	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABAYE0677	COG5510	response to toxic substance
ABAYE0679	COG2832	Protein of unknown function (DUF454)
ABAYE0680	COG1376	ErfK ybiS ycfS ynhG family protein
ABAYE0684	COG1289	transmembrane transporter activity
ABAYE0685	COG2814	Major facilitator Superfamily
ABAYE0689	COG1115	amino acid carrier protein
ABAYE0690	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABAYE0691	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABAYE0692	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABAYE0697	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABAYE0699	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABAYE0700	COG1077	Cell shape determining protein MreB Mrl
ABAYE0701	COG1792	Involved in formation and maintenance of cell shape
ABAYE0703	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABAYE0704	COG0424	maF-like protein
ABAYE0705	COG1530	ribonuclease E activity
ABAYE0708	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABAYE0712	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABAYE0717	COG2207	Transcriptional regulator
ABAYE0720	COG1113	amino acid transport
ABAYE0721	COG2828	Protein conserved in bacteria
ABAYE0722	COG0142	geranyltranstransferase activity
ABAYE0723	COG2315	Protein conserved in bacteria
ABAYE0726	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABAYE0731	COG2194	sulfuric ester hydrolase activity
ABAYE0732	COG0745	RESPONSE REGULATOR receiver
ABAYE0733	COG0642	Histidine kinase
ABAYE0735	COG0004	ammonium transporteR
ABAYE0736	COG0583	DNA-binding transcription factor activity
ABAYE0740	COG0525	valine-tRNA ligase activity
ABAYE0742	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE0744	COG0393	Putative heavy-metal-binding
ABAYE0745	COG0393	Putative heavy-metal-binding
ABAYE0746	COG1538	Outer membrane efflux protein
ABAYE0748	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE0749	COG0671	phosphoesterase, PA-phosphatase related
ABAYE0755	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABAYE0758	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABAYE0758	COG1648	precorrin-2 dehydrogenase activity
ABAYE0759	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABAYE0760	COG1733	regulation of RNA biosynthetic process
ABAYE0762	COG0531	amino acid
ABAYE0765	COG0321	lipoyl(octanoyl) transferase activity
ABAYE0766	COG2921	Belongs to the UPF0250 family
ABAYE0774	COG2009	succinate dehydrogenase
ABAYE0775	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABAYE0776	COG1053	succinate dehydrogenase
ABAYE0777	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABAYE0782	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAYE0789	COG2354	Protein conserved in bacteria
ABAYE0790	COG2321	neutral zinc metallopeptidase
ABAYE0794	COG2843	Capsule synthesis protein
ABAYE0797	COG0589	response to stress
ABAYE0801	COG0505	Belongs to the CarA family
ABAYE0806	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABAYE0807	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABAYE0815	COG0477	Major facilitator Superfamily
ABAYE0816	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABAYE0820	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABAYE0825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABAYE0826	COG0584	glycerophosphoryl diester phosphodiesterase
ABAYE0831	COG0741	lytic transglycosylase activity
ABAYE0835	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABAYE0838	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABAYE0846	COG0778	Nitroreductase
ABAYE0849	COG1929	Belongs to the glycerate kinase type-1 family
ABAYE0850	COG0243	molybdopterin cofactor binding
ABAYE0851	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABAYE0852	COG3339	Conserved Protein
ABAYE0854	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABAYE0858	COG1113	amino acid transport
ABAYE0860	COG0019	diaminopimelate decarboxylase activity
ABAYE0862	COG2267	carboxylic ester hydrolase activity
ABAYE0863	COG1280	lysine exporter protein (LysE YggA)
ABAYE0864	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABAYE0870	COG0463	Glycosyl transferase, family 2
ABAYE0874	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE0882	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABAYE0883	COG1136	(ABC) transporter
ABAYE0884	COG0658	competence protein
ABAYE0884	COG2333	competence protein COMEC
ABAYE0886	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABAYE0886	COG0616	signal peptide processing
ABAYE0887	COG0596	Alpha beta hydrolase
ABAYE0888	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABAYE0890	COG0628	permease
ABAYE0898	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABAYE0902	COG0823	Involved in the tonB-independent uptake of proteins
ABAYE0907	COG0824	Thioesterase
ABAYE0908	COG1473	amidohydrolase
ABAYE0912	COG0047	phosphoribosylformylglycinamidine synthase activity
ABAYE0912	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABAYE0913	COG2814	Major facilitator Superfamily
ABAYE0914	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABAYE0915	COG1024	Enoyl-CoA hydratase
ABAYE0916	COG1051	belongs to the nudix hydrolase family
ABAYE0916	COG1056	cytidyltransferase-related domain
ABAYE0918	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABAYE0921	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABAYE0924	COG4625	pathogenesis
ABAYE0925	COG0583	DNA-binding transcription factor activity
ABAYE0926	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABAYE0927	COG4208	sulfate ABC transporter
ABAYE0928	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABAYE0930	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABAYE0931	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABAYE0932	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABAYE0936	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABAYE0939	COG0681	Belongs to the peptidase S26 family
ABAYE0942	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABAYE0944	COG1381	Involved in DNA repair and RecF pathway recombination
ABAYE0945	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABAYE0947	COG4221	oxidoreductase activity
ABAYE0955	COG0556	nucleotide-excision repair
ABAYE0966	COG2070	2-Nitropropane dioxygenase
ABAYE0972	COG1215	transferase activity, transferring glycosyl groups
ABAYE0975	COG0415	Belongs to the DNA photolyase family
ABAYE0977	COG1252	NADH dehydrogenase
ABAYE0978	COG1686	Belongs to the peptidase S11 family
ABAYE0981	COG1187	pseudouridine synthase activity
ABAYE0985	COG0477	Major facilitator Superfamily
ABAYE0986	COG0583	DNA-binding transcription factor activity
ABAYE0990	COG0612	Peptidase, M16
ABAYE0996	COG1203	CRISPR-associated helicase, Cas3
ABAYE1010	COG0352	thiamine-phosphate diphosphorylase activity
ABAYE1017	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABAYE1023	COG1309	transcriptional regulator
ABAYE1026	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABAYE1027	COG0076	glutamate decarboxylase activity
ABAYE1029	COG1522	sequence-specific DNA binding
ABAYE1030	COG3961	Belongs to the TPP enzyme family
ABAYE1031	COG1113	amino acid transport
ABAYE1032	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABAYE1033	COG0573	inorganic phosphate transmembrane transporter activity
ABAYE1035	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABAYE1036	COG0616	signal peptide processing
ABAYE1043	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABAYE1044	COG1686	Belongs to the peptidase S11 family
ABAYE1049	COG0583	DNA-binding transcription factor activity
ABAYE1050	COG1067	ATP-dependent peptidase activity
ABAYE1055	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ABAYE1059	COG1966	Carbon starvation protein
ABAYE1060	COG2879	small protein
ABAYE1061	COG0583	DNA-binding transcription factor activity
ABAYE1062	COG0006	proline dipeptidase activity
ABAYE1063	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABAYE1064	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABAYE1067	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAYE1068	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABAYE1068	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABAYE1082	COG1741	Belongs to the pirin family
ABAYE1084	COG2964	Protein conserved in bacteria
ABAYE1087	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABAYE1089	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABAYE1090	COG4605	iron ion homeostasis
ABAYE1091	COG4604	ABC transporter, ATP-binding protein
ABAYE1092	COG4607	ABC-type enterochelin transport system periplasmic component
ABAYE1093	COG4774	siderophore transport
ABAYE1095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABAYE1096	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABAYE1097	COG1535	isochorismatase
ABAYE1097	COG3433	isochorismatase activity
ABAYE1100	COG1132	(ABC) transporter
ABAYE1102	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABAYE1104	COG1169	isochorismate synthase
ABAYE1107	COG3739	integral membrane protein
ABAYE1115	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABAYE1122	COG0308	aminopeptidase N
ABAYE1123	COG0512	Glutamine amidotransferase of anthranilate synthase
ABAYE1125	COG3104	oligopeptide transport
ABAYE1128	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABAYE1134	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABAYE1135	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABAYE1136	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABAYE1140	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABAYE1141	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABAYE1142	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABAYE1145	COG1960	acyl-CoA dehydrogenase activity
ABAYE1146	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABAYE1147	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAYE1150	COG2223	nitrite transmembrane transporter activity
ABAYE1152	COG0024	Methionine aminopeptidase
ABAYE1153	COG0052	Belongs to the universal ribosomal protein uS2 family
ABAYE1156	COG2207	Transcriptional regulator
ABAYE1161	COG2951	lytic endotransglycosylase activity
ABAYE1162	COG0772	Belongs to the SEDS family
ABAYE1165	COG0842	Transport permease protein
ABAYE1166	COG1131	(ABC) transporter
ABAYE1172	COG1538	Outer membrane efflux protein
ABAYE1174	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE1178	COG4215	(ABC) transporter
ABAYE1179	COG4160	amino acid transport
ABAYE1180	COG4598	ABC transporter
ABAYE1182	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABAYE1184	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAYE1193	COG0745	RESPONSE REGULATOR receiver
ABAYE1194	COG0642	Histidine kinase
ABAYE1196	COG0494	nUDIX hydrolase
ABAYE1198	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABAYE1199	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABAYE1200	COG3139	Protein of unknown function (DUF1315)
ABAYE1201	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABAYE1202	COG1301	dicarboxylic acid transport
ABAYE1204	COG1960	acyl-CoA dehydrogenase activity
ABAYE1205	COG2819	hydrolase of the alpha beta superfamily
ABAYE1207	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABAYE1209	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABAYE1210	COG1234	tRNA 3'-trailer cleavage
ABAYE1216	COG2363	Small membrane protein
ABAYE1220	COG0513	Belongs to the DEAD box helicase family
ABAYE1222	COG0778	Nitroreductase
ABAYE1240	COG1484	DNA-dependent DNA replication
ABAYE1284	COG4783	chaperone-mediated protein folding
ABAYE1285	COG1610	YqeY-like protein
ABAYE1286	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABAYE1303	COG3111	PFAM Bacterial OB fold (BOF) protein
ABAYE1308	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABAYE1309	COG0786	glutamate:sodium symporter activity
ABAYE1311	COG0583	DNA-binding transcription factor activity
ABAYE1313	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1316	COG2186	Transcriptional regulator
ABAYE1328	COG0477	Major facilitator Superfamily
ABAYE1335	COG2995	paraquat-inducible protein a
ABAYE1336	COG3008	intermembrane lipid transfer
ABAYE1336	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABAYE1338	COG2351	hydroxyisourate hydrolase activity
ABAYE1346	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABAYE1348	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABAYE1349	COG0642	Histidine kinase
ABAYE1350	COG0745	RESPONSE REGULATOR receiver
ABAYE1354	COG1794	racemase activity, acting on amino acids and derivatives
ABAYE1360	COG1301	dicarboxylic acid transport
ABAYE1362	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABAYE1363	COG2011	ABC-type metal ion transport system permease component
ABAYE1364	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABAYE1365	COG1464	Belongs to the NlpA lipoprotein family
ABAYE1366	COG0151	Belongs to the GarS family
ABAYE1367	COG0138	bifunctional purine biosynthesis protein purh
ABAYE1368	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABAYE1376	COG2308	Evidence 4 Homologs of previously reported genes of
ABAYE1378	COG1305	Transglutaminase-like
ABAYE1380	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABAYE1381	COG0305	Participates in initiation and elongation during chromosome replication
ABAYE1386	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABAYE1388	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABAYE1389	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABAYE1395	COG0726	polysaccharide deacetylase
ABAYE1395	COG1649	PFAM Uncharacterised BCR, COG1649
ABAYE1396	COG1215	transferase activity, transferring glycosyl groups
ABAYE1397	COG3658	cytochrome
ABAYE1399	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABAYE1404	COG0583	DNA-binding transcription factor activity
ABAYE1408	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAYE1409	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAYE1412	COG1960	acyl-CoA dehydrogenase activity
ABAYE1413	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAYE1414	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE1420	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABAYE1421	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABAYE1423	COG2205	protein histidine kinase activity
ABAYE1424	COG0745	RESPONSE REGULATOR receiver
ABAYE1425	COG0174	glutamine synthetase
ABAYE1428	COG0477	Major facilitator Superfamily
ABAYE1429	COG0729	surface antigen
ABAYE1434	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAYE1435	COG2814	Major facilitator Superfamily
ABAYE1439	COG0583	DNA-binding transcription factor activity
ABAYE1442	COG1187	pseudouridine synthase activity
ABAYE1446	COG0802	atpase or kinase
ABAYE1447	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABAYE1449	COG1923	regulation of RNA biosynthetic process
ABAYE1450	COG0697	spore germination
ABAYE1456	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABAYE1456	COG0519	Catalyzes the synthesis of GMP from XMP
ABAYE1457	COG4302	ethanolamine ammonia-lyase activity
ABAYE1458	COG4303	Ethanolamine ammonia lyase large subunit
ABAYE1459	COG0531	amino acid
ABAYE1463	COG1454	alcohol dehydrogenase
ABAYE1464	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABAYE1469	COG0308	aminopeptidase N
ABAYE1477	COG1605	Chorismate mutase
ABAYE1482	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABAYE1485	COG1309	transcriptional regulator
ABAYE1487	COG0668	transmembrane transport
ABAYE1494	COG4773	Receptor
ABAYE1499	COG0488	(ABC) transporter
ABAYE1500	COG0589	response to stress
ABAYE1505	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABAYE1507	COG3135	benzoate transporter
ABAYE1508	COG1522	sequence-specific DNA binding
ABAYE1511	COG0583	DNA-binding transcription factor activity
ABAYE1513	COG0183	Belongs to the thiolase family
ABAYE1519	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABAYE1521	COG0824	Thioesterase
ABAYE1522	COG1454	alcohol dehydrogenase
ABAYE1525	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABAYE1529	COG0069	glutamate synthase activity
ABAYE1535	COG2814	Major facilitator Superfamily
ABAYE1538	COG0511	ligase activity, forming carbon-carbon bonds
ABAYE1541	COG1116	anion transmembrane transporter activity
ABAYE1541	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAYE1542	COG0745	RESPONSE REGULATOR receiver
ABAYE1544	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAYE1544	COG2146	nitrite reductase [NAD(P)H] activity
ABAYE1545	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAYE1546	COG0243	molybdopterin cofactor binding
ABAYE1548	COG0243	molybdopterin cofactor binding
ABAYE1549	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABAYE1552	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABAYE1552	COG0315	cyclic pyranopterin monophosphate synthase activity
ABAYE1553	COG0303	'Molybdopterin
ABAYE1557	COG0697	spore germination
ABAYE1561	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABAYE1562	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABAYE1573	COG2204	response regulator
ABAYE1574	COG3852	Histidine kinase
ABAYE1579	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABAYE1580	COG0575	Belongs to the CDS family
ABAYE1587	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAYE1589	COG2137	regulation of response to DNA damage stimulus
ABAYE1591	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABAYE1592	COG1011	Hydrolase
ABAYE1598	COG1522	sequence-specific DNA binding
ABAYE1600	COG1113	amino acid transport
ABAYE1603	COG0659	secondary active sulfate transmembrane transporter activity
ABAYE1604	COG2135	peptidase activity
ABAYE1607	COG3300	MHYT domain
ABAYE1607	COG5001	Diguanylate cyclase
ABAYE1612	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABAYE1612	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABAYE1612	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABAYE1613	COG1105	Belongs to the carbohydrate kinase PfkB family
ABAYE1614	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABAYE1614	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABAYE1621	COG0024	Methionine aminopeptidase
ABAYE1622	COG0583	DNA-binding transcription factor activity
ABAYE1624	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABAYE1625	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABAYE1626	COG0517	IMP dehydrogenase activity
ABAYE1626	COG0516	GMP reductase activity
ABAYE1631	COG0552	protein localization to endoplasmic reticulum
ABAYE1634	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABAYE1636	COG1294	oxidase, subunit
ABAYE1641	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABAYE1643	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABAYE1644	COG4774	siderophore transport
ABAYE1647	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABAYE1648	COG0569	domain protein
ABAYE1649	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABAYE1655	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABAYE1656	COG0542	response to heat
ABAYE1658	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABAYE1661	COG1902	pentaerythritol trinitrate reductase activity
ABAYE1661	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABAYE1670	COG2323	membrane
ABAYE1671	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABAYE1673	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABAYE1674	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABAYE1675	COG0183	Belongs to the thiolase family
ABAYE1676	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABAYE1677	COG0596	Alpha beta hydrolase
ABAYE1678	COG2271	Major facilitator Superfamily
ABAYE1679	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABAYE1680	COG3485	protocatechuate 3,4-dioxygenase
ABAYE1681	COG3485	protocatechuate 3,4-dioxygenase
ABAYE1682	COG0710	3-dehydroquinate dehydratase activity
ABAYE1683	COG3420	alginic acid biosynthetic process
ABAYE1684	COG3659	wide pore channel activity
ABAYE1685	COG4993	Dehydrogenase
ABAYE1687	COG2391	methyltransferase activity
ABAYE1690	COG1414	Transcriptional regulator
ABAYE1691	COG0583	DNA-binding transcription factor activity
ABAYE1692	COG1960	acyl-CoA dehydrogenase activity
ABAYE1697	COG2814	Major facilitator Superfamily
ABAYE1700	COG0154	amidase activity
ABAYE1704	COG4638	Rieske (2fe-2S)
ABAYE1706	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1708	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE1710	COG3733	amine oxidase
ABAYE1712	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE1714	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABAYE1715	COG0183	Belongs to the thiolase family
ABAYE1716	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABAYE1717	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABAYE1719	COG4829	muconolactone delta-isomerase
ABAYE1720	COG4948	Mandelate Racemase Muconate Lactonizing
ABAYE1721	COG0583	DNA-binding transcription factor activity
ABAYE1723	COG2186	Transcriptional regulator
ABAYE1728	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE1731	COG1902	pentaerythritol trinitrate reductase activity
ABAYE1731	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABAYE1739	COG1309	transcriptional regulator
ABAYE1741	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1742	COG4689	acetoacetate decarboxylase
ABAYE1744	COG1902	pentaerythritol trinitrate reductase activity
ABAYE1749	COG1335	isochorismatase
ABAYE1750	COG0583	DNA-binding transcription factor activity
ABAYE1752	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABAYE1752	COG0475	glutathione-regulated potassium exporter activity
ABAYE1754	COG1473	amidohydrolase
ABAYE1774	COG0583	DNA-binding transcription factor activity
ABAYE1777	COG1566	PFAM secretion protein HlyD family protein
ABAYE1780	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE1781	COG0129	dihydroxy-acid dehydratase activity
ABAYE1783	COG0583	DNA-binding transcription factor activity
ABAYE1784	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABAYE1786	COG2084	Dehydrogenase
ABAYE1789	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABAYE1802	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABAYE1805	COG0556	nucleotide-excision repair
ABAYE1812	COG1073	alpha beta
ABAYE1814	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1817	COG2207	Transcriptional regulator
ABAYE1819	COG2205	protein histidine kinase activity
ABAYE1820	COG0745	RESPONSE REGULATOR receiver
ABAYE1821	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE1822	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABAYE1823	COG1538	Outer membrane efflux protein
ABAYE1825	COG2072	flavoprotein involved in K transport
ABAYE1827	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABAYE1856	COG3539	Fimbrial protein
ABAYE1861	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABAYE1863	COG0753	catalase activity
ABAYE1888	COG3433	isochorismatase activity
ABAYE1888	COG1535	isochorismatase
ABAYE1889	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1890	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1892	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABAYE1893	COG4149	molybdate abc transporter
ABAYE1894	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABAYE1896	COG4638	Rieske (2fe-2S)
ABAYE1897	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABAYE1898	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABAYE1898	COG0543	2 iron, 2 sulfur cluster binding
ABAYE1902	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE1904	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1908	COG2207	Transcriptional regulator
ABAYE1909	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE1910	COG2610	gluconate transmembrane transporter activity
ABAYE1912	COG0583	DNA-binding transcription factor activity
ABAYE1915	COG2031	fatty acid transporter
ABAYE1916	COG0183	Belongs to the thiolase family
ABAYE1917	COG0583	DNA-binding transcription factor activity
ABAYE1918	COG0583	DNA-binding transcription factor activity
ABAYE1921	COG1027	Aspartate ammonia-lyase
ABAYE1923	COG0477	Major facilitator Superfamily
ABAYE1927	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAYE1928	COG4521	taurine ABC transporter
ABAYE1933	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABAYE1934	COG1733	regulation of RNA biosynthetic process
ABAYE1935	COG2207	Transcriptional regulator
ABAYE1935	COG3708	Transcriptional regulator
ABAYE1938	COG0730	response to heat
ABAYE1940	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABAYE1940	COG3453	Protein conserved in bacteria
ABAYE1942	COG3781	membrane
ABAYE1943	COG1063	alcohol dehydrogenase
ABAYE1945	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAYE1946	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABAYE1947	COG0022	dehydrogenase e1 component
ABAYE1948	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABAYE1949	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABAYE1952	COG3706	GGDEF domain
ABAYE1955	COG0133	tryptophan synthase activity
ABAYE1958	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABAYE1966	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABAYE1972	COG2226	methyltransferase
ABAYE1983	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAYE1984	COG4773	Receptor
ABAYE1988	COG0730	response to heat
ABAYE1989	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABAYE1992	COG0406	alpha-ribazole phosphatase activity
ABAYE1993	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABAYE1996	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABAYE2002	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABAYE2004	COG4264	IucA IucC family
ABAYE2005	COG4264	IucA IucC family
ABAYE2006	COG2814	Major facilitator Superfamily
ABAYE2009	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABAYE2012	COG1960	acyl-CoA dehydrogenase activity
ABAYE2013	COG1960	acyl-CoA dehydrogenase activity
ABAYE2014	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABAYE2015	COG2207	Transcriptional regulator
ABAYE2016	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABAYE2017	COG0776	regulation of translation
ABAYE2020	COG1959	2 iron, 2 sulfur cluster binding
ABAYE2022	COG0822	iron-sulfur transferase activity
ABAYE2023	COG0316	Belongs to the HesB IscA family
ABAYE2029	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABAYE2033	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABAYE2034	COG0702	epimerase
ABAYE2041	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAYE2043	COG0339	signal peptide processing
ABAYE2047	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ABAYE2053	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABAYE2054	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABAYE2060	COG0776	regulation of translation
ABAYE2064	COG0590	tRNA wobble adenosine to inosine editing
ABAYE2073	COG0084	hydrolase, TatD family'
ABAYE2077	COG1663	tetraacyldisaccharide 4'-kinase activity
ABAYE2078	COG1132	(ABC) transporter
ABAYE2080	COG0811	peptide transport
ABAYE2081	COG1475	DNA binding
ABAYE2082	COG1192	Involved in chromosome partitioning
ABAYE2084	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABAYE2087	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABAYE2088	COG0191	fructose-bisphosphate aldolase activity
ABAYE2092	COG0424	maF-like protein
ABAYE2093	COG2850	peptidyl-arginine hydroxylation
ABAYE2096	COG0640	Transcriptional regulator
ABAYE2098	COG3619	membrane
ABAYE2099	COG3122	Protein conserved in bacteria
ABAYE2100	COG1132	(ABC) transporter
ABAYE2104	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABAYE2105	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABAYE2108	COG0506	proline dehydrogenase activity
ABAYE2108	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABAYE2108	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABAYE2109	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABAYE2112	COG3698	Phosphodiester glycosidase
ABAYE2114	COG2353	YceI-like domain
ABAYE2116	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABAYE2127	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABAYE2127	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABAYE2132	COG3539	Fimbrial protein
ABAYE2133	COG3121	Chaperone
ABAYE2142	COG0697	spore germination
ABAYE2145	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABAYE2147	COG0583	DNA-binding transcription factor activity
ABAYE2152	COG1309	transcriptional regulator
ABAYE2156	COG1522	sequence-specific DNA binding
ABAYE2158	COG1126	abc transporter atp-binding protein
ABAYE2159	COG0765	amino acid transport
ABAYE2160	COG0765	amino acid transport
ABAYE2167	COG1464	Belongs to the NlpA lipoprotein family
ABAYE2169	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABAYE2170	COG2011	ABC-type metal ion transport system permease component
ABAYE2171	COG0012	GTP binding
ABAYE2176	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABAYE2184	COG0386	Belongs to the glutathione peroxidase family
ABAYE2186	COG0436	Aminotransferase
ABAYE2187	COG1301	dicarboxylic acid transport
ABAYE2194	COG3634	alkyl hydroperoxide reductase activity
ABAYE2197	COG0583	DNA-binding transcription factor activity
ABAYE2198	COG0798	PFAM Bile acid sodium symporter
ABAYE2199	COG0640	Transcriptional regulator
ABAYE2202	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABAYE2204	COG0583	DNA-binding transcription factor activity
ABAYE2207	COG1953	Uracil, thiamine, allantoin
ABAYE2209	COG2175	clavaminate synthase activity
ABAYE2210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAYE2211	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABAYE2212	COG4521	taurine ABC transporter
ABAYE2214	COG0477	Major facilitator Superfamily
ABAYE2219	COG1271	oxidase subunit
ABAYE2220	COG1294	oxidase, subunit
ABAYE2223	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAYE2227	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABAYE2231	COG3052	prosthetic group binding
ABAYE2232	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABAYE2235	COG2814	Major facilitator Superfamily
ABAYE2240	COG1346	cytolysis
ABAYE2242	COG0583	DNA-binding transcription factor activity
ABAYE2243	COG0625	glutathione transferase activity
ABAYE2244	COG0625	glutathione transferase activity
ABAYE2245	COG0583	DNA-binding transcription factor activity
ABAYE2248	COG1045	serine acetyltransferase
ABAYE2249	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAYE2250	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABAYE2251	COG1280	lysine exporter protein (LysE YggA)
ABAYE2253	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAYE2254	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAYE2255	COG1126	abc transporter atp-binding protein
ABAYE2256	COG0765	amino acid transport
ABAYE2257	COG0765	amino acid transport
ABAYE2260	COG2205	protein histidine kinase activity
ABAYE2260	COG0784	Response regulator, receiver
ABAYE2269	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2282	COG0583	DNA-binding transcription factor activity
ABAYE2286	COG0318	PFAM AMP-dependent synthetase and ligase
ABAYE2287	COG1309	transcriptional regulator
ABAYE2288	COG1960	acyl-CoA dehydrogenase activity
ABAYE2289	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABAYE2290	COG1024	Enoyl-CoA hydratase
ABAYE2293	COG0583	DNA-binding transcription factor activity
ABAYE2296	COG1960	acyl-CoA dehydrogenase activity
ABAYE2298	COG2814	Major facilitator Superfamily
ABAYE2300	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABAYE2301	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABAYE2302	COG2814	Major facilitator Superfamily
ABAYE2303	COG1960	acyl-CoA dehydrogenase activity
ABAYE2304	COG1024	Enoyl-CoA hydratase
ABAYE2305	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2306	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABAYE2307	COG0183	Belongs to the thiolase family
ABAYE2309	COG2814	Major facilitator Superfamily
ABAYE2311	COG1024	Enoyl-CoA hydratase
ABAYE2314	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAYE2315	COG1960	acyl-CoA dehydrogenase activity
ABAYE2316	COG2814	Major facilitator Superfamily
ABAYE2317	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABAYE2318	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABAYE2321	COG3842	ATPase activity
ABAYE2322	COG1840	ABC-type Fe3 transport system, periplasmic component
ABAYE2324	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAYE2325	COG1414	Transcriptional regulator
ABAYE2327	COG0583	DNA-binding transcription factor activity
ABAYE2328	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABAYE2329	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2331	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABAYE2333	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2334	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABAYE2335	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE2336	COG2267	carboxylic ester hydrolase activity
ABAYE2341	COG3038	cytochrome b561
ABAYE2342	COG0753	catalase activity
ABAYE2343	COG2271	Major facilitator Superfamily
ABAYE2344	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABAYE2345	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAYE2352	COG1278	Cold shock
ABAYE2361	COG0210	DNA helicase
ABAYE2362	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABAYE2363	COG2050	protein possibly involved in aromatic compounds catabolism
ABAYE2365	COG3327	negative regulation of DNA-templated transcription, initiation
ABAYE2366	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABAYE2367	COG0183	Belongs to the thiolase family
ABAYE2368	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABAYE2369	COG1024	Enoyl-CoA hydratase
ABAYE2370	COG1024	Enoyl-CoA hydratase
ABAYE2371	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABAYE2372	COG2151	metal-sulfur cluster biosynthetic enzyme
ABAYE2373	COG3396	Phenylacetate-CoA oxygenase
ABAYE2374	COG3460	Phenylacetate-CoA oxygenase
ABAYE2375	COG3396	Phenylacetate-CoA oxygenase
ABAYE2376	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2376	COG2030	dehydratase
ABAYE2377	COG1760	l-serine dehydratase
ABAYE2378	COG0531	amino acid
ABAYE2379	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2384	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABAYE2388	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABAYE2390	COG0789	Transcriptional regulator
ABAYE2392	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABAYE2395	COG2807	transmembrane transport
ABAYE2396	COG0590	tRNA wobble adenosine to inosine editing
ABAYE2398	COG0583	DNA-binding transcription factor activity
ABAYE2406	COG2885	chlorophyll binding
ABAYE2406	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABAYE2420	COG1116	anion transmembrane transporter activity
ABAYE2421	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAYE2423	COG0864	Transcriptional regulator
ABAYE2425	COG1733	regulation of RNA biosynthetic process
ABAYE2426	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABAYE2427	COG0511	ligase activity, forming carbon-carbon bonds
ABAYE2428	COG0439	Biotin carboxylase
ABAYE2431	COG1063	alcohol dehydrogenase
ABAYE2433	COG1309	transcriptional regulator
ABAYE2437	COG0038	chloride channel
ABAYE2438	COG4770	biotin carboxylase activity
ABAYE2442	COG1914	H( )-stimulated, divalent metal cation uptake system
ABAYE2443	COG0583	DNA-binding transcription factor activity
ABAYE2447	COG3209	COG3209 Rhs family protein
ABAYE2454	COG3501	Rhs element vgr protein
ABAYE2460	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABAYE2465	COG2814	Major facilitator Superfamily
ABAYE2468	COG1560	Kdo2-lipid A biosynthetic process
ABAYE2471	COG5006	permease, DMT superfamily
ABAYE2475	COG1522	sequence-specific DNA binding
ABAYE2479	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABAYE2487	COG1538	Outer membrane efflux protein
ABAYE2488	COG1137	ATPase activity
ABAYE2489	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABAYE2491	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABAYE2503	COG5434	Belongs to the glycosyl hydrolase 28 family
ABAYE2507	COG3566	protein conserved in bacteria
ABAYE2511	COG3567	Phage-associated protein, HI1409 family
ABAYE2512	COG5410	chromosome segregation
ABAYE2526	COG1733	regulation of RNA biosynthetic process
ABAYE2527	COG2814	Major facilitator Superfamily
ABAYE2535	COG1278	Cold shock
ABAYE2536	COG1280	lysine exporter protein (LysE YggA)
ABAYE2542	COG1570	exodeoxyribonuclease VII activity
ABAYE2553	COG0583	DNA-binding transcription factor activity
ABAYE2555	COG4638	Rieske (2fe-2S)
ABAYE2556	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABAYE2557	COG0543	2 iron, 2 sulfur cluster binding
ABAYE2557	COG0633	Ferredoxin
ABAYE2558	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2559	COG3135	benzoate transporter
ABAYE2560	COG2814	Major facilitator Superfamily
ABAYE2563	COG1643	Atp-dependent helicase
ABAYE2564	COG0450	alkyl hydroperoxide reductase
ABAYE2566	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABAYE2568	COG3634	alkyl hydroperoxide reductase activity
ABAYE2572	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABAYE2573	COG0625	glutathione transferase activity
ABAYE2575	COG2885	chlorophyll binding
ABAYE2587	COG1765	OsmC-like protein
ABAYE2589	COG0667	Aldo Keto reductase
ABAYE2592	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABAYE2594	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABAYE2598	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABAYE2600	COG3038	cytochrome b561
ABAYE2601	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABAYE2602	COG2252	PERMEase
ABAYE2606	COG2072	flavoprotein involved in K transport
ABAYE2610	COG1741	Belongs to the pirin family
ABAYE2611	COG1309	transcriptional regulator
ABAYE2613	COG0300	oxidoreductase activity
ABAYE2614	COG2072	flavoprotein involved in K transport
ABAYE2615	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
ABAYE2624	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABAYE2627	COG2814	Major facilitator Superfamily
ABAYE2628	COG1024	Enoyl-CoA hydratase
ABAYE2629	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2631	COG1960	acyl-CoA dehydrogenase activity
ABAYE2640	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABAYE2640	COG1902	pentaerythritol trinitrate reductase activity
ABAYE2642	COG2203	Gaf domain
ABAYE2642	COG4251	negative regulation of phosphorylation
ABAYE2642	COG3706	GGDEF domain
ABAYE2642	COG5001	Diguanylate cyclase
ABAYE2647	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABAYE2659	COG4172	Belongs to the ABC transporter superfamily
ABAYE2660	COG4239	(ABC) transporter, permease
ABAYE2661	COG4174	ABC transporter (Permease)
ABAYE2663	COG0741	lytic transglycosylase activity
ABAYE2663	COG0741	lytic transglycosylase activity
ABAYE2663	COG1388	LysM domain
ABAYE2663	COG1388	LysM domain
ABAYE2664	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABAYE2672	COG0583	DNA-binding transcription factor activity
ABAYE2673	COG1279	arginine transmembrane transporter activity
ABAYE2677	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAYE2678	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAYE2679	COG0006	proline dipeptidase activity
ABAYE2687	COG1278	Cold shock
ABAYE2698	COG0739	heme binding
ABAYE2759	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABAYE2762	COG3384	dioxygenase
ABAYE2764	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABAYE2765	COG2878	Part of a membrane complex involved in electron transport
ABAYE2766	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABAYE2770	COG0768	penicillin binding
ABAYE2771	COG0742	ribosomal rna small subunit methyltransferase
ABAYE2774	COG0830	nickel cation binding
ABAYE2776	COG0804	urea catabolic process
ABAYE2786	COG1253	flavin adenine dinucleotide binding
ABAYE2787	COG2851	Citrate transporter
ABAYE2798	COG1773	rubredoxin
ABAYE2799	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAYE2801	COG0583	DNA-binding transcription factor activity
ABAYE2806	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABAYE2807	COG4181	ATPase activity
ABAYE2816	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABAYE2820	COG0306	phosphate transporter
ABAYE2823	COG3958	Transketolase
ABAYE2824	COG3959	Transketolase, thiamine diphosphate binding domain
ABAYE2825	COG2271	Major facilitator Superfamily
ABAYE2826	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2827	COG0583	DNA-binding transcription factor activity
ABAYE2830	COG2223	nitrite transmembrane transporter activity
ABAYE2831	COG2207	Transcriptional regulator
ABAYE2832	COG2066	Belongs to the glutaminase family
ABAYE2833	COG0242	peptide deformylase activity
ABAYE2834	COG0477	Major facilitator Superfamily
ABAYE2836	COG0028	Belongs to the TPP enzyme family
ABAYE2839	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2840	COG2267	carboxylic ester hydrolase activity
ABAYE2842	COG2271	Major facilitator Superfamily
ABAYE2843	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABAYE2845	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE2849	COG1414	Transcriptional regulator
ABAYE2852	COG1024	Enoyl-CoA hydratase
ABAYE2854	COG1215	transferase activity, transferring glycosyl groups
ABAYE2855	COG0726	polysaccharide deacetylase
ABAYE2855	COG1649	PFAM Uncharacterised BCR, COG1649
ABAYE2857	COG4681	YaeQ
ABAYE2859	COG0523	cobalamin synthesis protein
ABAYE2862	COG1607	acyl-coa hydrolase
ABAYE2864	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABAYE2865	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABAYE2866	COG1309	transcriptional regulator
ABAYE2871	COG2040	homocysteine
ABAYE2872	COG0531	amino acid
ABAYE2878	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABAYE2879	COG0477	Major facilitator Superfamily
ABAYE2884	COG0084	hydrolase, TatD family'
ABAYE2904	COG0582	viral genome integration into host DNA
ABAYE2905	COG0405	Gamma-glutamyltransferase
ABAYE2906	COG2814	Major facilitator Superfamily
ABAYE2908	COG2050	protein possibly involved in aromatic compounds catabolism
ABAYE2911	COG1090	epimerase
ABAYE2915	COG0420	3'-5' exonuclease activity
ABAYE2920	COG0735	belongs to the Fur family
ABAYE2921	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABAYE2925	COG0121	glutamine amidotransferase
ABAYE2928	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABAYE2930	COG0210	DNA helicase
ABAYE2931	COG2885	chlorophyll binding
ABAYE2932	COG0204	Acyl-transferase
ABAYE2935	COG2894	cell division
ABAYE2938	COG1280	lysine exporter protein (LysE YggA)
ABAYE2939	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABAYE2939	COG1674	ftsk spoiiie
ABAYE2940	COG0492	ferredoxin-NADP+ reductase activity
ABAYE2941	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABAYE2943	COG0456	acetyltransferase
ABAYE2955	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABAYE2955	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABAYE2958	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE2964	COG0473	3-isopropylmalate dehydrogenase activity
ABAYE2965	COG0583	DNA-binding transcription factor activity
ABAYE2968	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABAYE2973	COG0564	pseudouridine synthase activity
ABAYE2975	COG0358	DNA primase activity
ABAYE2978	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABAYE2981	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABAYE2987	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABAYE2989	COG0351	phosphomethylpyrimidine kinase
ABAYE2989	COG0352	thiamine-phosphate diphosphorylase activity
ABAYE2989	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABAYE2990	COG1652	LysM domain
ABAYE2995	COG1399	metal-binding, possibly nucleic acid-binding protein
ABAYE2996	COG3101	peptidyl-lysine hydroxylation
ABAYE2997	COG0009	L-threonylcarbamoyladenylate synthase
ABAYE2998	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABAYE2999	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABAYE3002	COG4106	trans-aconitate 2-methyltransferase activity
ABAYE3005	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABAYE3005	COG2226	methyltransferase
ABAYE3005	COG0596	Alpha beta hydrolase
ABAYE3006	COG1877	trehalose-phosphatase activity
ABAYE3007	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABAYE3008	COG2223	nitrite transmembrane transporter activity
ABAYE3012	COG1196	nuclear chromosome segregation
ABAYE3014	COG0730	response to heat
ABAYE3017	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABAYE3019	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABAYE3029	COG0489	protein tyrosine kinase activity
ABAYE3031	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABAYE3031	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABAYE3037	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABAYE3038	COG2081	HI0933 family
ABAYE3040	COG0668	transmembrane transport
ABAYE3044	COG0583	DNA-binding transcription factor activity
ABAYE3049	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABAYE3050	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABAYE3056	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABAYE3063	COG2205	protein histidine kinase activity
ABAYE3064	COG0745	RESPONSE REGULATOR receiver
ABAYE3067	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABAYE3069	COG0384	phenazine biosynthesis protein PhzF
ABAYE3076	COG1309	transcriptional regulator
ABAYE3078	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABAYE3079	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABAYE3082	COG0583	DNA-binding transcription factor activity
ABAYE3086	COG1473	amidohydrolase
ABAYE3088	COG0583	DNA-binding transcription factor activity
ABAYE3091	COG0583	DNA-binding transcription factor activity
ABAYE3092	COG1053	succinate dehydrogenase
ABAYE3094	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAYE3095	COG2814	Major facilitator Superfamily
ABAYE3097	COG1960	acyl-CoA dehydrogenase activity
ABAYE3099	COG0583	DNA-binding transcription factor activity
ABAYE3100	COG1063	alcohol dehydrogenase
ABAYE3104	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABAYE3105	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABAYE3106	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABAYE3110	COG3667	copper resistance
ABAYE3111	COG2132	Multicopper oxidase
ABAYE3113	COG0561	phosphatase activity
ABAYE3114	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABAYE3116	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABAYE3119	COG1214	PFAM Peptidase M22, glycoprotease
ABAYE3129	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABAYE3131	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABAYE3132	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABAYE3133	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABAYE3141	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABAYE3143	COG1846	Transcriptional regulator
ABAYE3144	COG1764	response to oxidative stress
ABAYE3152	COG0037	tRNA processing
ABAYE3154	COG0248	Ppx GppA phosphatase
ABAYE3159	COG0072	phenylalanine-tRNA ligase activity
ABAYE3163	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABAYE3166	COG1238	metal cluster binding
ABAYE3167	COG0625	glutathione transferase activity
ABAYE3170	COG0318	PFAM AMP-dependent synthetase and ligase
ABAYE3171	COG3028	Belongs to the UPF0307 family
ABAYE3172	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABAYE3176	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABAYE3177	COG0617	tRNA 3'-terminal CCA addition
ABAYE3178	COG1555	photosystem II stabilization
ABAYE3179	COG3956	TIGRFAM MazG family protein
ABAYE3181	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABAYE3185	COG2205	protein histidine kinase activity
ABAYE3185	COG0784	Response regulator, receiver
ABAYE3185	COG5002	protein histidine kinase activity
ABAYE3186	COG1024	Enoyl-CoA hydratase
ABAYE3187	COG2084	Dehydrogenase
ABAYE3188	COG3622	Belongs to the hyi family
ABAYE3191	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ABAYE3192	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABAYE3193	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABAYE3194	COG0697	spore germination
ABAYE3196	COG2814	Major facilitator Superfamily
ABAYE3201	COG2132	Multicopper oxidase
ABAYE3204	COG2205	protein histidine kinase activity
ABAYE3223	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABAYE3225	COG0583	DNA-binding transcription factor activity
ABAYE3227	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABAYE3229	COG0084	hydrolase, TatD family'
ABAYE3232	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABAYE3239	COG0440	acetolactate synthase activity
ABAYE3240	COG0028	Belongs to the TPP enzyme family
ABAYE3247	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAYE3248	COG1136	(ABC) transporter
ABAYE3248	COG0577	efflux transmembrane transporter activity
ABAYE3249	COG1538	Outer membrane efflux protein
ABAYE3252	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABAYE3253	COG1162	GTPase activity
ABAYE3256	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABAYE3264	COG1426	Protein conserved in bacteria
ABAYE3271	COG0793	Belongs to the peptidase S41A family
ABAYE3274	COG2267	carboxylic ester hydrolase activity
ABAYE3277	COG1012	belongs to the aldehyde dehydrogenase family
ABAYE3278	COG3265	gluconokinase activity
ABAYE3280	COG0800	Aldolase
ABAYE3282	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABAYE3283	COG0857	belongs to the CobB CobQ family
ABAYE3283	COG0280	phosphate acetyltransferase
ABAYE3284	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABAYE3284	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABAYE3288	COG0740	serine-type endopeptidase activity
ABAYE3290	COG4774	siderophore transport
ABAYE3292	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABAYE3294	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABAYE3294	COG2813	Specifically methylates the guanine in position
ABAYE3322	COG0788	formyltetrahydrofolate deformylase activity
ABAYE3325	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABAYE3326	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABAYE3327	COG4651	solute:proton antiporter activity
ABAYE3327	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABAYE3331	COG0724	RNA recognition motif
ABAYE3332	COG0210	DNA helicase
ABAYE3337	COG1733	regulation of RNA biosynthetic process
ABAYE3342	COG1280	lysine exporter protein (LysE YggA)
ABAYE3343	COG1560	Kdo2-lipid A biosynthetic process
ABAYE3346	COG1301	dicarboxylic acid transport
ABAYE3357	COG0473	3-isopropylmalate dehydrogenase activity
ABAYE3369	COG0583	DNA-binding transcription factor activity
ABAYE3371	COG0625	glutathione transferase activity
ABAYE3372	COG2378	regulation of single-species biofilm formation
ABAYE3373	COG0546	phosphoglycolate phosphatase activity
ABAYE3375	COG1530	ribonuclease E activity
ABAYE3377	COG0583	DNA-binding transcription factor activity
ABAYE3378	COG4221	oxidoreductase activity
ABAYE3379	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABAYE3381	COG0534	Mate efflux family protein
ABAYE3384	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABAYE3391	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABAYE3392	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABAYE3395	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABAYE3397	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABAYE3397	COG0644	oxidoreductase
ABAYE3399	COG0425	Belongs to the sulfur carrier protein TusA family
ABAYE3400	COG4535	Mg2 and Co2 transporter CorC
ABAYE3402	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABAYE3407	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABAYE3408	COG0475	glutathione-regulated potassium exporter activity
ABAYE3408	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABAYE3411	COG0484	heat shock protein binding
ABAYE3412	COG0789	Transcriptional regulator
ABAYE3413	COG0598	Magnesium transport protein CorA
ABAYE3418	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABAYE3419	COG1074	ATP-dependent DNA helicase activity
ABAYE3420	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABAYE3424	COG2226	methyltransferase
ABAYE3427	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAYE3428	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABAYE3431	COG2111	Na H antiporter
ABAYE3431	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABAYE3432	COG1006	Multisubunit Na H antiporter MnhC subunit
ABAYE3433	COG0651	ATP synthesis coupled electron transport
ABAYE3435	COG2212	antiporter activity
ABAYE3439	COG0195	Participates in both transcription termination and antitermination
ABAYE3447	COG0237	dephospho-CoA kinase activity
ABAYE3449	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABAYE3453	COG0497	DNA recombination
ABAYE3455	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABAYE3462	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABAYE3462	COG2169	Transcriptional regulator
ABAYE3463	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABAYE3476	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABAYE3480	COG0326	Molecular chaperone. Has ATPase activity
ABAYE3483	COG2056	Na+-H+ antiporter family
ABAYE3498	COG0546	phosphoglycolate phosphatase activity
ABAYE3499	COG1716	ATPase activity
ABAYE3508	COG0181	hydroxymethylbilane synthase activity
ABAYE3510	COG3275	phosphorelay sensor kinase activity
ABAYE3514	COG1538	Outer membrane efflux protein
ABAYE3515	COG0697	spore germination
ABAYE3520	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABAYE3521	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABAYE3522	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABAYE3523	COG0772	Belongs to the SEDS family
ABAYE3528	COG4974	Belongs to the 'phage' integrase family
ABAYE3529	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABAYE3531	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABAYE3533	COG2197	response regulator
ABAYE3536	COG0793	Belongs to the peptidase S41A family
ABAYE3537	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABAYE3538	COG0795	lipopolysaccharide-transporting ATPase activity
ABAYE3546	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABAYE3546	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABAYE3548	COG0004	ammonium transporteR
ABAYE3549	COG0347	Belongs to the P(II) protein family
ABAYE3553	COG0659	secondary active sulfate transmembrane transporter activity
ABAYE3560	COG0789	Transcriptional regulator
ABAYE3576	COG3316	Transposase and inactivated derivatives
ABAYE3580	COG3316	Transposase and inactivated derivatives
ABAYE3581	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABAYE3583_1	COG3316	Transposase and inactivated derivatives
ABAYE3596	COG0697	spore germination
ABAYE3601	COG0789	Transcriptional regulator
ABAYE3654	COG0789	Transcriptional regulator
ABAYE3655	COG0589	response to stress
ABAYE3657	COG0640	Transcriptional regulator
ABAYE3659	COG0798	PFAM Bile acid sodium symporter
ABAYE3660	COG0431	NADPH-dependent FMN reductase
ABAYE3661	COG0492	ferredoxin-NADP+ reductase activity
ABAYE3662	COG2072	flavoprotein involved in K transport
ABAYE3669	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAYE3671	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABAYE3675	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABAYE3678	COG0318	PFAM AMP-dependent synthetase and ligase
ABAYE3680	COG0477	Major facilitator Superfamily
ABAYE3681	COG2860	membrane
ABAYE3682	COG3012	SEC-C Motif Domain Protein
ABAYE3683	COG1253	flavin adenine dinucleotide binding
ABAYE3685	COG2814	Major facilitator Superfamily
ABAYE3687	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABAYE3694	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABAYE3696	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABAYE3700	COG1309	transcriptional regulator
ABAYE3707	COG0758	DNA mediated transformation
ABAYE3709	COG0697	spore germination
ABAYE3710	COG1309	transcriptional regulator
ABAYE3713	COG0386	Belongs to the glutathione peroxidase family
ABAYE3718	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABAYE3727	COG1121	(ABC) transporter
ABAYE3728	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABAYE3729	COG1280	lysine exporter protein (LysE YggA)
ABAYE3730	COG2837	iron assimilation
ABAYE3731	COG0281	malic enzyme
ABAYE3740	COG0519	Catalyzes the synthesis of GMP from XMP
ABAYE3740	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABAYE3741	COG4399	Belongs to the UPF0754 family
ABAYE3742	COG2259	Doxx family
ABAYE3743	COG0586	Pfam SNARE associated Golgi protein
ABAYE3746	COG1192	Involved in chromosome partitioning
ABAYE3748	COG0271	Belongs to the BolA IbaG family
ABAYE3751	COG2267	carboxylic ester hydrolase activity
ABAYE3755	COG0318	PFAM AMP-dependent synthetase and ligase
ABAYE3755	COG0300	oxidoreductase activity
ABAYE3755	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABAYE3755	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE3755	COG3321	synthase
ABAYE3756	COG1960	acyl-CoA dehydrogenase activity
ABAYE3758	COG2197	response regulator
ABAYE3761	COG3916	Acyl-homoserine-lactone synthase
ABAYE3762	COG0477	Major facilitator Superfamily
ABAYE3763	COG1024	Enoyl-CoA hydratase
ABAYE3764	COG1024	Enoyl-CoA hydratase
ABAYE3765	COG1960	acyl-CoA dehydrogenase activity
ABAYE3766	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAYE3770	COG1113	amino acid transport
ABAYE3771	COG1113	amino acid transport
ABAYE3772	COG0251	oxidation-reduction process
ABAYE3775	COG1522	sequence-specific DNA binding
ABAYE3780	COG0564	pseudouridine synthase activity
ABAYE3787	COG1051	belongs to the nudix hydrolase family
ABAYE3791	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABAYE3794	COG1802	Transcriptional regulator
ABAYE3795	COG1448	Aminotransferase
ABAYE3796	COG0277	FAD linked oxidase domain protein
ABAYE3798	COG2186	Transcriptional regulator
ABAYE3800	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABAYE3803	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABAYE3806	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABAYE3808	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABAYE3809	COG0438	transferase activity, transferring glycosyl groups
ABAYE3812	COG0438	transferase activity, transferring glycosyl groups
ABAYE3815	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABAYE3821	COG0728	peptidoglycan biosynthetic process
ABAYE3822	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABAYE3835	COG0546	phosphoglycolate phosphatase activity
ABAYE3836	COG1028	Short-chain dehydrogenase reductase Sdr
ABAYE3840	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAYE3841	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAYE3842	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABAYE3843	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAYE3844	COG1116	anion transmembrane transporter activity
ABAYE3845	COG1309	transcriptional regulator
ABAYE3846	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABAYE3851	COG0196	riboflavin kinase activity
ABAYE3852	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABAYE3854	COG1047	Peptidyl-prolyl cis-trans
ABAYE3858	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABAYE3863	COG0583	DNA-binding transcription factor activity
ABAYE3869	COG2951	lytic endotransglycosylase activity
ABAYE3871	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABAYE3877	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABAYE3879	COG0671	phosphoesterase, PA-phosphatase related
ABAYE3881	COG0861	Integral membrane protein TerC family
ABAYE3883	COG0754	glutathionylspermidine amidase activity
ABAYE3885	COG0402	S-adenosylhomocysteine deaminase activity
ABAYE3889	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABAYE3897	COG1230	cation diffusion facilitator family transporter
ABAYE3900	COG0706	membrane insertase activity
ABAYE3903	COG0230	Belongs to the bacterial ribosomal protein bL34 family
p1ABAYE0005	COG4115	mRNA cleavage
p3ABAYE0008	COG0604	alcohol dehydrogenase
p3ABAYE0012	COG0582	viral genome integration into host DNA
p3ABAYE0015	COG2130	NADP-dependent
p3ABAYE0016	COG1309	transcriptional regulator
p3ABAYE0018	COG1902	pentaerythritol trinitrate reductase activity
p3ABAYE0020	COG1979	alcohol dehydrogenase
p3ABAYE0023	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
p3ABAYE0030	COG0477	Major facilitator Superfamily
p3ABAYE0031	COG0697	spore germination
p3ABAYE0035	COG3321	synthase
p3ABAYE0035	COG0604	alcohol dehydrogenase
p3ABAYE0036	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
p3ABAYE0037	COG0583	DNA-binding transcription factor activity
p3ABAYE0038	COG4221	oxidoreductase activity
p3ABAYE0046	COG3077	Addiction module antitoxin, RelB DinJ family
p3ABAYE0049	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
p3ABAYE0055	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
p3ABAYE0064	COG2963	transposase activity
p3ABAYE0065	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
p3ABAYE0065	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
p3ABAYE0084	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
p3ABAYE0112	COG1475	DNA binding
p3ABAYE0113	COG1192	Involved in chromosome partitioning