ABAYE0001 SM00382 ATPases associated with a variety of cellular activities ABAYE0001 SM00760 Bacterial dnaA protein helix-turn-helix domain ABAYE0002 SM00480 DNA polymerase III beta subunit ABAYE0004 SM00387 Histidine kinase-like ATPases ABAYE0004 SM00433 TopoisomeraseII ABAYE0007 SM00382 ATPases associated with a variety of cellular activities ABAYE0033 SM00271 DnaJ molecular chaperone homology domain ABAYE0042 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE0043 SM00829 Enoylreductase ABAYE0047 SM00478 endonuclease III ABAYE0047 SM00525 ABAYE0047 ABAYE0053 SM00382 ATPases associated with a variety of cellular activities ABAYE0058 SM01130 ABAYE0058 ABAYE0065 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE0071 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABAYE0073 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE0073 SM00866 ABAYE0073 ABAYE0085 SM00387 Histidine kinase-like ATPases ABAYE0103 SM00450 Rhodanese Homology Domain ABAYE0106 SM00387 Histidine kinase-like ATPases ABAYE0106 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0107 SM00448 cheY-homologous receiver domain ABAYE0107 SM00862 Transcriptional regulatory protein, C terminal ABAYE0119 SM00257 Lysin motif ABAYE0126 SM00387 Histidine kinase-like ATPases ABAYE0126 SM00433 TopoisomeraseII ABAYE0139 SM00267 diguanylate cyclase ABAYE0152 SM00842 Cell division protein FtsA ABAYE0153 SM00864 Tubulin/FtsZ family, GTPase domain ABAYE0153 SM00865 Tubulin/FtsZ family, C-terminal domain ABAYE0164 SM00849 Metallo-beta-lactamase superfamily ABAYE0166 SM00116 Domain in cystathionine beta-synthase and other proteins. ABAYE0166 SM01240 ABAYE0166 ABAYE0171 SM00937 ABAYE0171 ABAYE0173 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABAYE0181 SM00344 helix_turn_helix ASNC type ABAYE0184 SM00421 helix_turn_helix, Lux Regulon ABAYE0184 SM00448 cheY-homologous receiver domain ABAYE0186 SM00387 Histidine kinase-like ATPases ABAYE0186 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0186 SM00448 cheY-homologous receiver domain ABAYE0194 SM00267 diguanylate cyclase ABAYE0197 SM00829 Enoylreductase ABAYE0206 SM00530 Helix-turn-helix XRE-family like proteins ABAYE0208 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE0223 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0232 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0236 SM00477 DNA/RNA non-specific endonuclease ABAYE0236 SM00892 DNA/RNA non-specific endonuclease ABAYE0241 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0245 SM00357 Cold shock protein domain ABAYE0249 SM00530 Helix-turn-helix XRE-family like proteins ABAYE0251 SM00474 3'-5' exonuclease ABAYE0258 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABAYE0258 SM00387 Histidine kinase-like ATPases ABAYE0258 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0259 SM00448 cheY-homologous receiver domain ABAYE0259 SM00862 Transcriptional regulatory protein, C terminal ABAYE0261 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE0261 SM00732 Likely ribonuclease with RNase H fold. ABAYE0262 SM00947 Carbonic anhydrase ABAYE0265 SM00382 ATPases associated with a variety of cellular activities ABAYE0290 SM00842 Cell division protein FtsA ABAYE0294 SM00965 Secretin and TonB N terminus short domain ABAYE0310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABAYE0310 SM00954 Region found in RelA / SpoT proteins ABAYE0311 SM01409 ABAYE0311 ABAYE0312 SM00072 Guanylate kinase homologues. ABAYE0351 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABAYE0372 SM00116 Domain in cystathionine beta-synthase and other proteins. ABAYE0381 SM00861 Transketolase, pyrimidine binding domain ABAYE0383 SM00487 DEAD-like helicases superfamily ABAYE0383 SM00490 helicase superfamily c-terminal domain ABAYE0385 SM00382 ATPases associated with a variety of cellular activities ABAYE0394 SM00487 DEAD-like helicases superfamily ABAYE0394 SM00490 helicase superfamily c-terminal domain ABAYE0397 SM00563 Phosphate acyltransferases ABAYE0407 SM01403 ABAYE0407 ABAYE0411 SM01382 ABAYE0411 ABAYE0411 SM01383 ABAYE0411 ABAYE0414 SM00322 K homology RNA-binding domain ABAYE0418 SM01374 ABAYE0418 ABAYE0419 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABAYE0432 SM00363 S4 RNA-binding domain ABAYE0432 SM01390 ABAYE0432 ABAYE0433 SM00662 RNA polymerases D ABAYE0445 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE0445 SM00955 ABAYE0445 ABAYE0452 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0462 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE0468 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABAYE0483 SM00878 Biotin carboxylase C-terminal domain ABAYE0490 SM00650 Ribosomal RNA adenine dimethylases ABAYE0497 SM00563 Phosphate acyltransferases ABAYE0498 SM00155 Phospholipase D. Active site motifs. ABAYE0501 SM00267 diguanylate cyclase ABAYE0516 SM00450 Rhodanese Homology Domain ABAYE0521 SM00481 DNA polymerase alpha chain like domain ABAYE0527 SM01323 ABAYE0527 ABAYE0535 SM00479 ABAYE0535 ABAYE0543 SM00530 Helix-turn-helix XRE-family like proteins ABAYE0575 SM00387 Histidine kinase-like ATPases ABAYE0575 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0599 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABAYE0599 SM00387 Histidine kinase-like ATPases ABAYE0599 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0600 SM00448 cheY-homologous receiver domain ABAYE0600 SM00862 Transcriptional regulatory protein, C terminal ABAYE0612 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0618 SM00849 Metallo-beta-lactamase superfamily ABAYE0620 SM00957 SecA DEAD-like domain ABAYE0620 SM00958 SecA preprotein cross-linking domain ABAYE0630 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0633 SM00564 beta-propeller repeat ABAYE0646 SM00838 Elongation factor G C-terminus ABAYE0650 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ABAYE0650 SM01232 ABAYE0650 ABAYE0656 SM00671 Sel1-like repeats. ABAYE0667 SM00448 cheY-homologous receiver domain ABAYE0668 SM00448 cheY-homologous receiver domain ABAYE0669 SM00260 Two component signalling adaptor domain ABAYE0670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABAYE0671 SM00073 Histidine Phosphotransfer domain ABAYE0671 SM00260 Two component signalling adaptor domain ABAYE0671 SM00387 Histidine kinase-like ATPases ABAYE0671 SM00448 cheY-homologous receiver domain ABAYE0671 SM01231 ABAYE0671 ABAYE0674 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE0697 SM00845 GatB domain ABAYE0705 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE0713 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0717 SM00342 helix_turn_helix, arabinose operon control protein ABAYE0718 SM00829 Enoylreductase ABAYE0724 SM00244 prohibitin homologues ABAYE0727 SM00563 Phosphate acyltransferases ABAYE0732 SM00448 cheY-homologous receiver domain ABAYE0732 SM00862 Transcriptional regulatory protein, C terminal ABAYE0733 SM00387 Histidine kinase-like ATPases ABAYE0733 SM00388 His Kinase A (phosphoacceptor) domain ABAYE0742 SM00822 ABAYE0742 ABAYE0749 SM00014 Acid phosphatase homologues ABAYE0771 SM00450 Rhodanese Homology Domain ABAYE0780 SM00861 Transketolase, pyrimidine binding domain ABAYE0784 SM00881 CoA binding domain ABAYE0794 SM00854 Bacterial capsule synthesis protein PGA_cap ABAYE0800 SM00851 MGS-like domain ABAYE0800 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABAYE0801 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABAYE0804 SM01103 ABAYE0804 ABAYE0806 SM00382 ATPases associated with a variety of cellular activities ABAYE0819 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABAYE0822 SM00883 Chaperonin 10 Kd subunit ABAYE0825 SM00849 Metallo-beta-lactamase superfamily ABAYE0855 SM00978 ABAYE0855 ABAYE0856 SM00382 ATPases associated with a variety of cellular activities ABAYE0865 SM00893 Electron transfer flavoprotein domain ABAYE0866 SM00893 Electron transfer flavoprotein domain ABAYE0867 SM00434 DNA Topoisomerase IV ABAYE0883 SM00382 ATPases associated with a variety of cellular activities ABAYE0884 SM00849 Metallo-beta-lactamase superfamily ABAYE0909 SM00382 ATPases associated with a variety of cellular activities ABAYE0910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABAYE0911 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABAYE0912 SM01211 ABAYE0912 ABAYE0926 SM00382 ATPases associated with a variety of cellular activities ABAYE0936 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABAYE0938 SM00838 Elongation factor G C-terminus ABAYE0941 SM00358 Double-stranded RNA binding motif ABAYE0941 SM00535 Ribonuclease III family ABAYE0953 SM00267 diguanylate cyclase ABAYE0955 SM00487 DEAD-like helicases superfamily ABAYE0955 SM00490 helicase superfamily c-terminal domain ABAYE0958 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABAYE0962 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABAYE0982 SM01329 ABAYE0982 ABAYE0993 SM00880 ABAYE0993 ABAYE0993 SM01118 ABAYE0993 ABAYE1014 SM00487 DEAD-like helicases superfamily ABAYE1014 SM00490 helicase superfamily c-terminal domain ABAYE1029 SM00344 helix_turn_helix ASNC type ABAYE1035 SM00382 ATPases associated with a variety of cellular activities ABAYE1044 SM00936 Penicillin-binding protein 5, C-terminal domain ABAYE1048 SM00257 Lysin motif ABAYE1055 SM00052 Putative diguanylate phosphodiesterase ABAYE1058 SM00841 Elongation factor P, C-terminal ABAYE1058 SM01185 ABAYE1058 ABAYE1091 SM00382 ATPases associated with a variety of cellular activities ABAYE1100 SM00382 ATPases associated with a variety of cellular activities ABAYE1101 SM00382 ATPases associated with a variety of cellular activities ABAYE1114 SM01092 CO dehydrogenase flavoprotein C-terminal domain ABAYE1115 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABAYE1117 SM00463 Small MutS-related domain ABAYE1126 SM01230 ABAYE1126 ABAYE1136 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABAYE1138 SM00919 Malic enzyme, NAD binding domain ABAYE1138 SM01274 ABAYE1138 ABAYE1139 SM00052 Putative diguanylate phosphodiesterase ABAYE1139 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABAYE1139 SM00091 PAS domain ABAYE1139 SM00267 diguanylate cyclase ABAYE1142 SM00996 S-adenosyl-L-homocysteine hydrolase ABAYE1142 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABAYE1146 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE1156 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1166 SM00382 ATPases associated with a variety of cellular activities ABAYE1168 SM00479 ABAYE1168 ABAYE1177 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE1180 SM00382 ATPases associated with a variety of cellular activities ABAYE1184 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1191 SM00382 ATPases associated with a variety of cellular activities ABAYE1193 SM00448 cheY-homologous receiver domain ABAYE1193 SM00862 Transcriptional regulatory protein, C terminal ABAYE1194 SM00387 Histidine kinase-like ATPases ABAYE1194 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1206 SM00830 Chorismate mutase type II ABAYE1219 SM00357 Cold shock protein domain ABAYE1220 SM00487 DEAD-like helicases superfamily ABAYE1220 SM00490 helicase superfamily c-terminal domain ABAYE1224 SM00855 Phosphoglycerate mutase family ABAYE1262 SM00495 Chitin-binding domain type 3 ABAYE1292 SM00220 Serine/Threonine protein kinases, catalytic domain ABAYE1304 SM01034 Sensors of blue-light using FAD ABAYE1307 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1316 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1316 SM00895 ABAYE1316 ABAYE1319 SM00972 Spore Coat Protein U domain ABAYE1324 SM00972 Spore Coat Protein U domain ABAYE1338 SM00095 Transthyretin ABAYE1340 SM00448 cheY-homologous receiver domain ABAYE1340 SM00862 Transcriptional regulatory protein, C terminal ABAYE1341 SM00387 Histidine kinase-like ATPases ABAYE1341 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1349 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1350 SM00448 cheY-homologous receiver domain ABAYE1350 SM00862 Transcriptional regulatory protein, C terminal ABAYE1362 SM00849 Metallo-beta-lactamase superfamily ABAYE1364 SM00382 ATPases associated with a variety of cellular activities ABAYE1364 SM00930 ABAYE1364 ABAYE1366 SM01209 ABAYE1366 ABAYE1366 SM01210 ABAYE1366 ABAYE1367 SM00798 AICARFT/IMPCHase bienzyme ABAYE1367 SM00851 MGS-like domain ABAYE1373 SM01228 ABAYE1373 ABAYE1378 SM00460 Transglutaminase/protease-like homologues ABAYE1380 SM01005 Alanine racemase, C-terminal domain ABAYE1406 SM00937 ABAYE1406 ABAYE1409 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE1410 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1411 SM00822 ABAYE1411 ABAYE1414 SM00903 Flavin reductase like domain ABAYE1417 SM00905 Dihydroneopterin aldolase ABAYE1423 SM00387 Histidine kinase-like ATPases ABAYE1423 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1424 SM00448 cheY-homologous receiver domain ABAYE1424 SM00862 Transcriptional regulatory protein, C terminal ABAYE1425 SM01230 ABAYE1425 ABAYE1442 SM00363 S4 RNA-binding domain ABAYE1447 SM00853 MutL C terminal dimerisation domain ABAYE1447 SM01340 ABAYE1447 ABAYE1461 SM00862 Transcriptional regulatory protein, C terminal ABAYE1464 SM00382 ATPases associated with a variety of cellular activities ABAYE1470 SM00972 Spore Coat Protein U domain ABAYE1473 SM00972 Spore Coat Protein U domain ABAYE1477 SM00830 Chorismate mutase type II ABAYE1478 SM00344 helix_turn_helix ASNC type ABAYE1499 SM00382 ATPases associated with a variety of cellular activities ABAYE1505 SM00831 Cation transporter/ATPase, N-terminus ABAYE1508 SM00344 helix_turn_helix ASNC type ABAYE1514 SM00822 ABAYE1514 ABAYE1519 SM00382 ATPases associated with a variety of cellular activities ABAYE1525 SM00226 Low molecular weight phosphatase family ABAYE1534 SM01236 ABAYE1534 ABAYE1537 SM00878 Biotin carboxylase C-terminal domain ABAYE1542 SM00448 cheY-homologous receiver domain ABAYE1542 SM01012 ABAYE1542 ABAYE1546 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABAYE1548 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABAYE1549 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE1552 SM00852 Probable molybdopterin binding domain ABAYE1553 SM00852 Probable molybdopterin binding domain ABAYE1555 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1573 SM00382 ATPases associated with a variety of cellular activities ABAYE1573 SM00448 cheY-homologous receiver domain ABAYE1574 SM00091 PAS domain ABAYE1574 SM00387 Histidine kinase-like ATPases ABAYE1574 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1576 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE1582 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABAYE1584 SM00935 Outer membrane protein (OmpH-like) ABAYE1590 SM00382 ATPases associated with a variety of cellular activities ABAYE1591 SM00363 S4 RNA-binding domain ABAYE1598 SM00344 helix_turn_helix ASNC type ABAYE1607 SM00052 Putative diguanylate phosphodiesterase ABAYE1607 SM00091 PAS domain ABAYE1607 SM00267 diguanylate cyclase ABAYE1609 SM00347 helix_turn_helix multiple antibiotic resistance protein ABAYE1626 SM00116 Domain in cystathionine beta-synthase and other proteins. ABAYE1631 SM00382 ATPases associated with a variety of cellular activities ABAYE1631 SM00962 SRP54-type protein, GTPase domain ABAYE1631 SM00963 SRP54-type protein, helical bundle domain ABAYE1645 SM01264 ABAYE1645 ABAYE1653 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABAYE1656 SM00382 ATPases associated with a variety of cellular activities ABAYE1656 SM01086 C-terminal, D2-small domain, of ClpB protein ABAYE1669 SM01192 ABAYE1669 ABAYE1669 SM01193 ABAYE1669 ABAYE1673 SM00882 Coenzyme A transferase ABAYE1674 SM00882 Coenzyme A transferase ABAYE1676 SM00998 Adenylosuccinate lyase C-terminus ABAYE1683 SM00710 Parallel beta-helix repeats ABAYE1685 SM00564 beta-propeller repeat ABAYE1689 SM00849 Metallo-beta-lactamase superfamily ABAYE1690 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE1694 SM00855 Phosphoglycerate mutase family ABAYE1699 SM00347 helix_turn_helix multiple antibiotic resistance protein ABAYE1708 SM00903 Flavin reductase like domain ABAYE1709 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1716 SM00882 Coenzyme A transferase ABAYE1717 SM00882 Coenzyme A transferase ABAYE1720 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABAYE1723 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1723 SM00895 ABAYE1723 ABAYE1734 SM00422 helix_turn_helix, mercury resistance ABAYE1740 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1761 SM00860 SMI1 / KNR4 family ABAYE1771 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1771 SM00866 ABAYE1771 ABAYE1789 SM01400 ABAYE1789 ABAYE1794 SM00421 helix_turn_helix, Lux Regulon ABAYE1805 SM00487 DEAD-like helicases superfamily ABAYE1805 SM00490 helicase superfamily c-terminal domain ABAYE1814 SM00822 ABAYE1814 ABAYE1815 SM00822 ABAYE1815 ABAYE1817 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1819 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABAYE1819 SM00387 Histidine kinase-like ATPases ABAYE1819 SM00388 His Kinase A (phosphoacceptor) domain ABAYE1820 SM00448 cheY-homologous receiver domain ABAYE1820 SM00862 Transcriptional regulatory protein, C terminal ABAYE1861 SM00829 Enoylreductase ABAYE1878 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE1892 SM00382 ATPases associated with a variety of cellular activities ABAYE1900 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1902 SM00903 Flavin reductase like domain ABAYE1908 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1913 SM00882 Coenzyme A transferase ABAYE1914 SM00882 Coenzyme A transferase ABAYE1925 SM00567 E-Z type HEAT repeats ABAYE1926 SM00382 ATPases associated with a variety of cellular activities ABAYE1931 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE1931 SM00866 ABAYE1931 ABAYE1935 SM00342 helix_turn_helix, arabinose operon control protein ABAYE1940 SM00849 Metallo-beta-lactamase superfamily ABAYE1941 SM00382 ATPases associated with a variety of cellular activities ABAYE1943 SM00829 Enoylreductase ABAYE1947 SM00861 Transketolase, pyrimidine binding domain ABAYE1949 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE1952 SM00267 diguanylate cyclase ABAYE1958 SM00382 ATPases associated with a variety of cellular activities ABAYE1965 SM00341 Helicase and RNase D C-terminal ABAYE1965 SM00474 3'-5' exonuclease ABAYE1966 SM00493 ABAYE1966 ABAYE1977 SM01324 ABAYE1977 ABAYE1992 SM00855 Phosphoglycerate mutase family ABAYE1997 SM01006 Siderophore biosynthesis protein domain ABAYE2015 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2017 SM00411 bacterial (prokaryotic) histone like domain ABAYE2024 SM00271 DnaJ molecular chaperone homology domain ABAYE2027 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ABAYE2029 SM00487 DEAD-like helicases superfamily ABAYE2029 SM00490 helicase superfamily c-terminal domain ABAYE2029 SM00982 ABAYE2029 ABAYE2029 SM01058 CarD-like/TRCF domain ABAYE2040 SM00382 ATPases associated with a variety of cellular activities ABAYE2055 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2058 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABAYE2060 SM00411 bacterial (prokaryotic) histone like domain ABAYE2061 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE2066 SM00986 Uracil DNA glycosylase superfamily ABAYE2066 SM00987 UreE urease accessory protein, C-terminal domain ABAYE2078 SM00382 ATPases associated with a variety of cellular activities ABAYE2081 SM00470 ParB-like nuclease domain ABAYE2093 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ABAYE2096 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABAYE2100 SM00382 ATPases associated with a variety of cellular activities ABAYE2102 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2106 SM00344 helix_turn_helix ASNC type ABAYE2114 SM00867 YceI-like domain ABAYE2116 SM00861 Transketolase, pyrimidine binding domain ABAYE2124 SM00530 Helix-turn-helix XRE-family like proteins ABAYE2129 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE2129 SM00876 Biotin and Thiamin Synthesis associated domain ABAYE2151 SM01236 ABAYE2151 ABAYE2153 SM00563 Phosphate acyltransferases ABAYE2156 SM00344 helix_turn_helix ASNC type ABAYE2158 SM00382 ATPases associated with a variety of cellular activities ABAYE2161 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE2169 SM00382 ATPases associated with a variety of cellular activities ABAYE2169 SM00930 ABAYE2169 ABAYE2173 SM00100 Cyclic nucleotide-monophosphate binding domain ABAYE2173 SM00419 helix_turn_helix, cAMP Regulatory protein ABAYE2180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABAYE2183 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2188 SM00870 ABAYE2188 ABAYE2189 SM00481 DNA polymerase alpha chain like domain ABAYE2199 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABAYE2205 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2205 SM00895 ABAYE2205 ABAYE2211 SM00382 ATPases associated with a variety of cellular activities ABAYE2212 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE2223 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2227 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABAYE2246 SM00822 ABAYE2246 ABAYE2247 SM00450 Rhodanese Homology Domain ABAYE2253 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE2254 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE2255 SM00382 ATPases associated with a variety of cellular activities ABAYE2259 SM00421 helix_turn_helix, Lux Regulon ABAYE2259 SM00448 cheY-homologous receiver domain ABAYE2260 SM00387 Histidine kinase-like ATPases ABAYE2260 SM00388 His Kinase A (phosphoacceptor) domain ABAYE2260 SM00448 cheY-homologous receiver domain ABAYE2262 SM00344 helix_turn_helix ASNC type ABAYE2267 SM00384 DNA binding domain with preference for A/T rich regions ABAYE2270 SM01060 ABAYE2270 ABAYE2271 SM01236 ABAYE2271 ABAYE2291 SM00878 Biotin carboxylase C-terminal domain ABAYE2300 SM00882 Coenzyme A transferase ABAYE2301 SM00882 Coenzyme A transferase ABAYE2308 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE2312 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE2321 SM00382 ATPases associated with a variety of cellular activities ABAYE2323 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2323 SM00866 ABAYE2323 ABAYE2325 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE2335 SM00903 Flavin reductase like domain ABAYE2338 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2338 SM00895 ABAYE2338 ABAYE2342 SM01060 ABAYE2342 ABAYE2352 SM00357 Cold shock protein domain ABAYE2381 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2386 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2386 SM00895 ABAYE2386 ABAYE2388 SM01130 ABAYE2388 ABAYE2390 SM00422 helix_turn_helix, mercury resistance ABAYE2397 SM00248 ankyrin repeats ABAYE2404 SM00382 ATPases associated with a variety of cellular activities ABAYE2404 SM01086 C-terminal, D2-small domain, of ClpB protein ABAYE2420 SM00382 ATPases associated with a variety of cellular activities ABAYE2428 SM00796 Allophanate hydrolase subunit 1 ABAYE2428 SM00797 Allophanate hydrolase subunit 2 ABAYE2428 SM00878 Biotin carboxylase C-terminal domain ABAYE2431 SM00829 Enoylreductase ABAYE2436 SM00671 Sel1-like repeats. ABAYE2438 SM00878 Biotin carboxylase C-terminal domain ABAYE2439 SM00796 Allophanate hydrolase subunit 1 ABAYE2439 SM00797 Allophanate hydrolase subunit 2 ABAYE2469 SM00052 Putative diguanylate phosphodiesterase ABAYE2475 SM00344 helix_turn_helix ASNC type ABAYE2476 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABAYE2476 SM00534 ATPase domain of DNA mismatch repair MUTS family ABAYE2486 SM00382 ATPases associated with a variety of cellular activities ABAYE2488 SM00382 ATPases associated with a variety of cellular activities ABAYE2492 SM00116 Domain in cystathionine beta-synthase and other proteins. ABAYE2493 SM00840 ABAYE2493 ABAYE2503 SM00710 Parallel beta-helix repeats ABAYE2535 SM00357 Cold shock protein domain ABAYE2540 SM00530 Helix-turn-helix XRE-family like proteins ABAYE2550 SM00422 helix_turn_helix, mercury resistance ABAYE2563 SM00382 ATPases associated with a variety of cellular activities ABAYE2563 SM00487 DEAD-like helicases superfamily ABAYE2563 SM00490 helicase superfamily c-terminal domain ABAYE2563 SM00847 Helicase associated domain (HA2) Add an annotation ABAYE2580 SM00981 ABAYE2580 ABAYE2583 SM00382 ATPases associated with a variety of cellular activities ABAYE2583 SM01086 C-terminal, D2-small domain, of ClpB protein ABAYE2588 SM00100 Cyclic nucleotide-monophosphate binding domain ABAYE2588 SM00419 helix_turn_helix, cAMP Regulatory protein ABAYE2592 SM00788 Adenylosuccinate synthetase ABAYE2594 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABAYE2595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABAYE2616 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2625 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE2625 SM00895 ABAYE2625 ABAYE2626 SM00347 helix_turn_helix multiple antibiotic resistance protein ABAYE2642 SM00267 diguanylate cyclase ABAYE2647 SM00479 ABAYE2647 ABAYE2659 SM00382 ATPases associated with a variety of cellular activities ABAYE2663 SM00257 Lysin motif ABAYE2664 SM00479 ABAYE2664 ABAYE2675 SM00422 helix_turn_helix, mercury resistance ABAYE2679 SM01011 Aminopeptidase P, N-terminal domain ABAYE2687 SM00357 Cold shock protein domain ABAYE2701 SM00530 Helix-turn-helix XRE-family like proteins ABAYE2734 SM00507 HNH nucleases ABAYE2742 SM00382 ATPases associated with a variety of cellular activities ABAYE2747 SM00530 Helix-turn-helix XRE-family like proteins ABAYE2760 SM00382 ATPases associated with a variety of cellular activities ABAYE2760 SM00464 Found in ATP-dependent protease La (LON) ABAYE2764 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABAYE2766 SM00478 endonuclease III ABAYE2775 SM00988 UreE urease accessory protein, N-terminal domain ABAYE2786 SM01091 Transporter associated domain ABAYE2807 SM00382 ATPases associated with a variety of cellular activities ABAYE2809 SM00947 Carbonic anhydrase ABAYE2822 SM01018 B12 binding domain ABAYE2823 SM00861 Transketolase, pyrimidine binding domain ABAYE2826 SM00822 ABAYE2826 ABAYE2831 SM00342 helix_turn_helix, arabinose operon control protein ABAYE2849 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE2857 SM01322 ABAYE2857 ABAYE2878 SM01130 ABAYE2878 ABAYE2900 SM01040 BRO family, N-terminal domain ABAYE2909 SM01004 Delta-aminolevulinic acid dehydratase ABAYE2918 SM00382 ATPases associated with a variety of cellular activities ABAYE2932 SM00563 Phosphate acyltransferases ABAYE2939 SM00843 ABAYE2939 ABAYE2947 SM00838 Elongation factor G C-terminus ABAYE2947 SM00889 Elongation factor G, domain IV ABAYE2951 SM00825 Beta-ketoacyl synthase ABAYE2964 SM01329 ABAYE2964 ABAYE2973 SM00363 S4 RNA-binding domain ABAYE2975 SM00400 zinc finger ABAYE2975 SM00493 ABAYE2975 ABAYE2977 SM00028 Tetratricopeptide repeats ABAYE2981 SM01400 ABAYE2981 ABAYE2990 SM00257 Lysin motif ABAYE2992 SM00822 ABAYE2992 ABAYE2993 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABAYE3000 SM00363 S4 RNA-binding domain ABAYE3010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABAYE3010 SM00292 breast cancer carboxy-terminal domain ABAYE3010 SM00532 Ligase N family ABAYE3011 SM00771 ZipA, C-terminal domain (FtsZ-binding) ABAYE3013 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE3017 SM00382 ATPases associated with a variety of cellular activities ABAYE3017 SM00962 SRP54-type protein, GTPase domain ABAYE3017 SM00963 SRP54-type protein, helical bundle domain ABAYE3046 SM00357 Cold shock protein domain ABAYE3055 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABAYE3055 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABAYE3056 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABAYE3061 SM00267 diguanylate cyclase ABAYE3063 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABAYE3063 SM00387 Histidine kinase-like ATPases ABAYE3063 SM00388 His Kinase A (phosphoacceptor) domain ABAYE3064 SM00448 cheY-homologous receiver domain ABAYE3064 SM00862 Transcriptional regulatory protein, C terminal ABAYE3078 SM00903 Flavin reductase like domain ABAYE3085 SM00342 helix_turn_helix, arabinose operon control protein ABAYE3139 SM00331 Sigma factor PP2C-like phosphatases ABAYE3143 SM00347 helix_turn_helix multiple antibiotic resistance protein ABAYE3145 SM00382 ATPases associated with a variety of cellular activities ABAYE3149 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABAYE3149 SM00474 3'-5' exonuclease ABAYE3149 SM00475 5'-3' exonuclease ABAYE3149 SM00482 DNA polymerase A domain ABAYE3152 SM00977 TilS substrate C-terminal domain ABAYE3156 SM00357 Cold shock protein domain ABAYE3156 SM00382 ATPases associated with a variety of cellular activities ABAYE3156 SM00959 Rho termination factor, N-terminal domain ABAYE3158 SM00411 bacterial (prokaryotic) histone like domain ABAYE3159 SM00873 B3/4 domain ABAYE3159 SM00874 tRNA synthetase B5 domain ABAYE3159 SM00896 Ferredoxin-fold anticodon binding domain ABAYE3169 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABAYE3178 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABAYE3181 SM00954 Region found in RelA / SpoT proteins ABAYE3185 SM00073 Histidine Phosphotransfer domain ABAYE3185 SM00387 Histidine kinase-like ATPases ABAYE3185 SM00388 His Kinase A (phosphoacceptor) domain ABAYE3185 SM00448 cheY-homologous receiver domain ABAYE3193 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ABAYE3193 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ABAYE3199 SM00530 Helix-turn-helix XRE-family like proteins ABAYE3203 SM00448 cheY-homologous receiver domain ABAYE3203 SM00862 Transcriptional regulatory protein, C terminal ABAYE3204 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABAYE3204 SM00387 Histidine kinase-like ATPases ABAYE3204 SM00388 His Kinase A (phosphoacceptor) domain ABAYE3205 SM00746 metallochaperone-like domain ABAYE3233 SM01236 ABAYE3233 ABAYE3236 SM00052 Putative diguanylate phosphodiesterase ABAYE3236 SM00267 diguanylate cyclase ABAYE3248 SM00382 ATPases associated with a variety of cellular activities ABAYE3252 SM00479 ABAYE3252 ABAYE3254 SM00450 Rhodanese Homology Domain ABAYE3260 SM00564 beta-propeller repeat ABAYE3265 SM00028 Tetratricopeptide repeats ABAYE3267 SM00562 ABAYE3267 ABAYE3269 SM00014 Acid phosphatase homologues ABAYE3271 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABAYE3271 SM00245 tail specific protease ABAYE3287 SM00382 ATPases associated with a variety of cellular activities ABAYE3287 SM00994 ClpX C4-type zinc finger ABAYE3287 SM01086 C-terminal, D2-small domain, of ClpB protein ABAYE3291 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABAYE3292 SM00917 LeuA allosteric (dimerisation) domain ABAYE3295 SM00671 Sel1-like repeats. ABAYE3331 SM00360 RNA recognition motif ABAYE3335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABAYE3335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABAYE3335 SM00493 ABAYE3335 ABAYE3339 SM00829 Enoylreductase ABAYE3341 SM00382 ATPases associated with a variety of cellular activities ABAYE3348 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABAYE3351 SM00870 ABAYE3351 ABAYE3353 SM00342 helix_turn_helix, arabinose operon control protein ABAYE3354 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE3357 SM01329 ABAYE3357 ABAYE3365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABAYE3374 SM00363 S4 RNA-binding domain ABAYE3375 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE3379 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE3392 SM00849 Metallo-beta-lactamase superfamily ABAYE3400 SM00116 Domain in cystathionine beta-synthase and other proteins. ABAYE3400 SM01091 Transporter associated domain ABAYE3407 SM00487 DEAD-like helicases superfamily ABAYE3407 SM00490 helicase superfamily c-terminal domain ABAYE3411 SM00271 DnaJ molecular chaperone homology domain ABAYE3414 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE3414 SM00322 K homology RNA-binding domain ABAYE3415 SM01387 ABAYE3415 ABAYE3418 SM00382 ATPases associated with a variety of cellular activities ABAYE3439 SM00316 Ribosomal protein S1-like RNA-binding domain ABAYE3449 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABAYE3452 SM00028 Tetratricopeptide repeats ABAYE3455 SM00732 Likely ribonuclease with RNase H fold. ABAYE3460 SM00346 helix_turn_helix isocitrate lyase regulation ABAYE3462 SM00342 helix_turn_helix, arabinose operon control protein ABAYE3465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABAYE3465 SM00465 GIY-YIG type nucleases (URI domain) ABAYE3474 SM00422 helix_turn_helix, mercury resistance ABAYE3480 SM00387 Histidine kinase-like ATPases ABAYE3488 SM00663 RNA polymerase I subunit A N-terminus ABAYE3493 SM00649 Ribosomal protein L11/L12 ABAYE3494 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABAYE3494 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABAYE3499 SM00240 Forkhead associated domain ABAYE3501 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABAYE3503 SM00528 Domain in histone-like proteins of HNS family ABAYE3509 SM00448 cheY-homologous receiver domain ABAYE3509 SM00850 LytTr DNA-binding domain ABAYE3527 SM00899 ABAYE3527 ABAYE3533 SM00421 helix_turn_helix, Lux Regulon ABAYE3533 SM00448 cheY-homologous receiver domain ABAYE3534 SM00387 Histidine kinase-like ATPases ABAYE3534 SM00388 His Kinase A (phosphoacceptor) domain ABAYE3535 SM00382 ATPases associated with a variety of cellular activities ABAYE3535 SM00448 cheY-homologous receiver domain ABAYE3536 SM00245 tail specific protease ABAYE3549 SM00938 Nitrogen regulatory protein P-II ABAYE3560 SM00422 helix_turn_helix, mercury resistance ABAYE3581 SM00857 Resolvase, N terminal domain ABAYE3587 SM01059 Chloramphenicol acetyltransferase ABAYE3601 SM00422 helix_turn_helix, mercury resistance ABAYE3606 SM00422 helix_turn_helix, mercury resistance ABAYE3629 SM00487 DEAD-like helicases superfamily ABAYE3629 SM00490 helicase superfamily c-terminal domain ABAYE3654 SM00422 helix_turn_helix, mercury resistance ABAYE3657 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABAYE3658 SM00226 Low molecular weight phosphatase family ABAYE3665 SM00382 ATPases associated with a variety of cellular activities ABAYE3669 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE3670 SM01007 Class II Aldolase and Adducin N-terminal domain ABAYE3671 SM01130 ABAYE3671 ABAYE3679 SM00434 DNA Topoisomerase IV ABAYE3683 SM01091 Transporter associated domain ABAYE3686 SM00641 Glycosyl hydrolases family 25 ABAYE3690 SM00729 Elongator protein 3, MiaB family, Radical SAM ABAYE3692 SM00422 helix_turn_helix, mercury resistance ABAYE3712 SM00342 helix_turn_helix, arabinose operon control protein ABAYE3716 SM00382 ATPases associated with a variety of cellular activities ABAYE3727 SM00382 ATPases associated with a variety of cellular activities ABAYE3731 SM00919 Malic enzyme, NAD binding domain ABAYE3731 SM01274 ABAYE3731 ABAYE3732 SM00836 DALR anticodon binding domain ABAYE3732 SM01016 Arginyl tRNA synthetase N terminal dom ABAYE3754 SM00823 Phosphopantetheine attachment site ABAYE3754 SM00824 Thioesterase ABAYE3755 SM00823 Phosphopantetheine attachment site ABAYE3755 SM01294 ABAYE3755 ABAYE3758 SM00421 helix_turn_helix, Lux Regulon ABAYE3773 SM01005 Alanine racemase, C-terminal domain ABAYE3775 SM00344 helix_turn_helix ASNC type ABAYE3794 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE3794 SM00895 ABAYE3794 ABAYE3798 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABAYE3798 SM00895 ABAYE3798 ABAYE3802 SM00984 UDP binding domain ABAYE3815 SM00984 UDP binding domain ABAYE3817 SM00226 Low molecular weight phosphatase family ABAYE3822 SM00644 ABAYE3822 ABAYE3840 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE3841 SM00062 Bacterial periplasmic substrate-binding proteins ABAYE3844 SM00382 ATPases associated with a variety of cellular activities ABAYE3851 SM00904 Riboflavin kinase ABAYE3856 SM00248 ankyrin repeats ABAYE3862 SM00849 Metallo-beta-lactamase superfamily ABAYE3866 SM00235 Zinc-dependent metalloprotease ABAYE3867 SM00235 Zinc-dependent metalloprotease ABAYE3872 SM01001 AIR carboxylase ABAYE3879 SM00014 Acid phosphatase homologues ABAYE3901 SM01234 ABAYE3901 p1ABAYE0003 SM00671 Sel1-like repeats. p2ABAYE0004 SM00829 Enoylreductase p3ABAYE0008 SM00829 Enoylreductase p3ABAYE0015 SM00829 Enoylreductase p3ABAYE0024 SM00829 Enoylreductase p3ABAYE0028 SM00342 helix_turn_helix, arabinose operon control protein p3ABAYE0035 SM00829 Enoylreductase p3ABAYE0036 SM00829 Enoylreductase p3ABAYE0038 SM00822 p3ABAYE0038 p3ABAYE0039 SM00829 Enoylreductase p3ABAYE0043 SM00671 Sel1-like repeats. p3ABAYE0050 SM00530 Helix-turn-helix XRE-family like proteins p3ABAYE0054 SM00530 Helix-turn-helix XRE-family like proteins p3ABAYE0082 SM01040 BRO family, N-terminal domain p3ABAYE0085 SM00530 Helix-turn-helix XRE-family like proteins p3ABAYE0108 SM00530 Helix-turn-helix XRE-family like proteins p3ABAYE0112 SM00470 ParB-like nuclease domain