locus-tag class description LX00_00010 PF00579 tRNA synthetases class I (W and Y) LX00_00015 PF03702 Anhydro-N-acetylmuramic acid kinase LX00_00020 PF00561 alpha/beta hydrolase fold LX00_00025 PF01521 Iron-sulphur cluster biosynthesis LX00_00045 PF12848 ABC transporter LX00_00045 PF00005 ABC transporter LX00_00050 PF09335 SNARE associated Golgi protein LX00_00060 PF00204 DNA gyrase B LX00_00060 PF00986 DNA gyrase B subunit, carboxyl terminus LX00_00060 PF18053 DNA gyrase B subunit insert domain LX00_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_00060 PF01751 Toprim domain LX00_00065 PF02463 RecF/RecN/SMC N terminal domain LX00_00070 PF00712 DNA polymerase III beta subunit, N-terminal domain LX00_00070 PF02767 DNA polymerase III beta subunit, central domain LX00_00070 PF02768 DNA polymerase III beta subunit, C-terminal domain LX00_00075 PF00308 Bacterial dnaA protein LX00_00075 PF08299 Bacterial dnaA protein helix-turn-helix LX00_00075 PF11638 DnaA N-terminal domain LX00_00080 PF00468 Ribosomal protein L34 LX00_00085 PF00825 Ribonuclease P LX00_00090 PF01809 Putative membrane protein insertion efficiency factor LX00_00095 PF14849 YidC periplasmic domain LX00_00095 PF02096 60Kd inner membrane protein LX00_00100 PF10396 GTP-binding protein TrmE N-terminus LX00_00100 PF01926 50S ribosome-binding GTPase LX00_00100 PF12631 MnmE helical domain LX00_00105 PF02583 Metal-sensitive transcriptional repressor LX00_00110 PF01545 Cation efflux family LX00_00110 PF16916 Dimerisation domain of Zinc Transporter LX00_00115 PF10411 Disulfide bond isomerase protein N-terminus LX00_00115 PF13098 Thioredoxin-like domain LX00_00125 PF00156 Phosphoribosyl transferase domain LX00_00135 PF01979 Amidohydrolase family LX00_00140 PF00355 Rieske [2Fe-2S] domain LX00_00145 PF03738 Glutathionylspermidine synthase preATP-grasp LX00_00155 PF03741 Integral membrane protein TerC family LX00_00160 PF01569 PAP2 superfamily LX00_00170 PF02875 Mur ligase family, glutamate ligase domain LX00_00170 PF01225 Mur ligase family, catalytic domain LX00_00170 PF08245 Mur ligase middle domain LX00_00180 PF00731 AIR carboxylase LX00_00185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LX00_00185 PF02222 ATP-grasp domain LX00_00190 PF13406 Transglycosylase SLT domain LX00_00210 PF00012 Hsp70 protein LX00_00215 PF01025 GrpE LX00_00220 PF03466 LysR substrate binding domain LX00_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_00240 PF07859 alpha/beta hydrolase fold LX00_00245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LX00_00285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_00290 PF01252 Signal peptidase (SPase) II LX00_00295 PF06827 Zinc finger found in FPG and IleRS LX00_00295 PF00133 tRNA synthetases class I (I, L, M and V) LX00_00295 PF08264 Anticodon-binding domain of tRNA LX00_00300 PF01687 Riboflavin kinase LX00_00300 PF06574 FAD synthetase LX00_00310 PF01048 Phosphorylase superfamily LX00_00315 PF00440 Bacterial regulatory proteins, tetR family LX00_00315 PF08362 YcdC-like protein, C-terminal region LX00_00320 PF00005 ABC transporter LX00_00325 PF00528 Binding-protein-dependent transport system inner membrane component LX00_00330 PF00296 Luciferase-like monooxygenase LX00_00335 PF09084 NMT1/THI5 like LX00_00340 PF09084 NMT1/THI5 like LX00_00345 PF00696 Amino acid kinase family LX00_00345 PF00583 Acetyltransferase (GNAT) family LX00_00360 PF00106 short chain dehydrogenase LX00_00365 PF13419 Haloacid dehalogenase-like hydrolase LX00_00375 PF01323 DSBA-like thioredoxin domain LX00_00380 PF00440 Bacterial regulatory proteins, tetR family LX00_00380 PF08360 QacR-like protein, C-terminal region LX00_00385 PF00440 Bacterial regulatory proteins, tetR family LX00_00390 PF00175 Oxidoreductase NAD-binding domain LX00_00395 PF00487 Fatty acid desaturase LX00_00400 PF01138 3' exoribonuclease family, domain 1 LX00_00400 PF03725 3' exoribonuclease family, domain 2 LX00_00410 PF05506 Domain of unknown function (DUF756) LX00_00410 PF04185 Phosphoesterase family LX00_00420 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LX00_00420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LX00_00425 PF01510 N-acetylmuramoyl-L-alanine amidase LX00_00430 PF03023 Lipid II flippase MurJ LX00_00435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LX00_00435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_00440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_00440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LX00_00445 PF02706 Chain length determinant protein LX00_00445 PF13807 G-rich domain on putative tyrosine kinase LX00_00445 PF13614 AAA domain LX00_00450 PF01451 Low molecular weight phosphotyrosine protein phosphatase LX00_00455 PF02563 Polysaccharide biosynthesis/export protein LX00_00455 PF10531 SLBB domain LX00_00455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LX00_00460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LX00_00460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LX00_00460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LX00_00465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LX00_00465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LX00_00470 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LX00_00485 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_00485 PF14602 Hexapeptide repeat of succinyl-transferase LX00_00485 PF12464 Maltose acetyltransferase LX00_00490 PF00534 Glycosyl transferases group 1 LX00_00490 PF13439 Glycosyltransferase Family 4 LX00_00505 PF00534 Glycosyl transferases group 1 LX00_00510 PF00535 Glycosyl transferase family 2 LX00_00515 PF02397 Bacterial sugar transferase LX00_00520 PF00483 Nucleotidyl transferase LX00_00525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LX00_00525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LX00_00525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LX00_00530 PF00342 Phosphoglucose isomerase LX00_00535 PF16363 GDP-mannose 4,6 dehydratase LX00_00540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LX00_00540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LX00_00540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LX00_00540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LX00_00545 PF02652 L-lactate permease LX00_00550 PF07729 FCD domain LX00_00550 PF00392 Bacterial regulatory proteins, gntR family LX00_00555 PF01070 FMN-dependent dehydrogenase LX00_00560 PF09330 D-lactate dehydrogenase, membrane binding LX00_00560 PF01565 FAD binding domain LX00_00565 PF00155 Aminotransferase class I and II LX00_00570 PF00392 Bacterial regulatory proteins, gntR family LX00_00570 PF07729 FCD domain LX00_00580 PF00285 Citrate synthase, C-terminal domain LX00_00585 PF00330 Aconitase family (aconitate hydratase) LX00_00585 PF00694 Aconitase C-terminal domain LX00_00620 PF00849 RNA pseudouridylate synthase LX00_00635 PF00593 TonB dependent receptor LX00_00635 PF07715 TonB-dependent Receptor Plug Domain LX00_00645 PF01037 Lrp/AsnC ligand binding domain LX00_00650 PF01266 FAD dependent oxidoreductase LX00_00655 PF00842 Alanine racemase, C-terminal domain LX00_00655 PF01168 Alanine racemase, N-terminal domain LX00_00660 PF01042 Endoribonuclease L-PSP LX00_00665 PF00324 Amino acid permease LX00_00670 PF00324 Amino acid permease LX00_00680 PF00171 Aldehyde dehydrogenase family LX00_00685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LX00_00685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LX00_00690 PF13193 AMP-binding enzyme C-terminal domain LX00_00690 PF00501 AMP-binding enzyme LX00_00695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_00695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_00695 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_00700 PF00378 Enoyl-CoA hydratase/isomerase LX00_00705 PF00378 Enoyl-CoA hydratase/isomerase LX00_00710 PF00083 Sugar (and other) transporter LX00_00710 PF07690 Major Facilitator Superfamily LX00_00715 PF00765 Autoinducer synthase LX00_00725 PF03472 Autoinducer binding domain LX00_00725 PF00196 Bacterial regulatory proteins, luxR family LX00_00730 PF00501 AMP-binding enzyme LX00_00735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_00735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_00735 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_00740 PF16197 Ketoacyl-synthetase C-terminal extension LX00_00740 PF00109 Beta-ketoacyl synthase, N-terminal domain LX00_00740 PF02801 Beta-ketoacyl synthase, C-terminal domain LX00_00740 PF00975 Thioesterase domain LX00_00740 PF14765 Polyketide synthase dehydratase LX00_00740 PF00550 Phosphopantetheine attachment site LX00_00740 PF08242 Methyltransferase domain LX00_00745 PF00501 AMP-binding enzyme LX00_00745 PF00975 Thioesterase domain LX00_00745 PF00550 Phosphopantetheine attachment site LX00_00745 PF00668 Condensation domain LX00_00745 PF13193 AMP-binding enzyme C-terminal domain LX00_00760 PF16363 GDP-mannose 4,6 dehydratase LX00_00765 PF01648 4'-phosphopantetheinyl transferase superfamily LX00_00780 PF01722 BolA-like protein LX00_00790 PF13614 AAA domain LX00_00805 PF09335 SNARE associated Golgi protein LX00_00810 PF07681 DoxX LX00_00815 PF04286 Protein of unknown function (DUF445) LX00_00820 PF00117 Glutamine amidotransferase class-I LX00_00820 PF00958 GMP synthase C terminal domain LX00_00820 PF02540 NAD synthase LX00_00825 PF13427 Domain of unknown function (DUF4111) LX00_00825 PF01909 Nucleotidyltransferase domain LX00_00830 PF03551 Transcriptional regulator PadR-like family LX00_00840 PF05726 Pirin C-terminal cupin domain LX00_00840 PF02678 Pirin LX00_00860 PF03485 Arginyl tRNA synthetase N terminal domain LX00_00860 PF00750 tRNA synthetases class I (R) LX00_00860 PF05746 DALR anticodon binding domain LX00_00865 PF00390 Malic enzyme, N-terminal domain LX00_00865 PF03949 Malic enzyme, NAD binding domain LX00_00870 PF04261 Dyp-type peroxidase family LX00_00875 PF01810 LysE type translocator LX00_00880 PF00950 ABC 3 transport family LX00_00885 PF00005 ABC transporter LX00_00905 PF00119 ATP synthase A chain LX00_00910 PF00137 ATP synthase subunit C LX00_00915 PF00430 ATP synthase B/B' CF(0) LX00_00920 PF00213 ATP synthase delta (OSCP) subunit LX00_00925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LX00_00925 PF00306 ATP synthase alpha/beta chain, C terminal domain LX00_00925 PF02874 ATP synthase alpha/beta family, beta-barrel domain LX00_00930 PF00231 ATP synthase LX00_00935 PF02874 ATP synthase alpha/beta family, beta-barrel domain LX00_00935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LX00_00940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LX00_00950 PF00255 Glutathione peroxidase LX00_00960 PF07690 Major Facilitator Superfamily LX00_00965 PF00440 Bacterial regulatory proteins, tetR family LX00_00970 PF00892 EamA-like transporter family LX00_00975 PF01300 Telomere recombination LX00_00980 PF17782 DprA winged helix domain LX00_00980 PF02481 DNA recombination-mediator protein A LX00_00990 PF01327 Polypeptide deformylase LX00_01015 PF00440 Bacterial regulatory proteins, tetR family LX00_01050 PF00291 Pyridoxal-phosphate dependent enzyme LX00_01060 PF03358 NADPH-dependent FMN reductase LX00_01080 PF11842 Domain of unknown function (DUF3362) LX00_01080 PF04055 Radical SAM superfamily LX00_01080 PF08497 Radical SAM N-terminal LX00_01095 PF11798 IMS family HHH motif LX00_01095 PF11799 impB/mucB/samB family C-terminal domain LX00_01095 PF00817 impB/mucB/samB family LX00_01105 PF07690 Major Facilitator Superfamily LX00_01110 PF03641 Possible lysine decarboxylase LX00_01115 PF03741 Integral membrane protein TerC family LX00_01115 PF03471 Transporter associated domain LX00_01120 PF02810 SEC-C motif LX00_01125 PF03458 UPF0126 domain LX00_01130 PF07690 Major Facilitator Superfamily LX00_01135 PF03989 DNA gyrase C-terminal domain, beta-propeller LX00_01135 PF00521 DNA gyrase/topoisomerase IV, subunit A LX00_01140 PF13193 AMP-binding enzyme C-terminal domain LX00_01140 PF00501 AMP-binding enzyme LX00_01155 PF00719 Inorganic pyrophosphatase LX00_01160 PF03573 outer membrane porin, OprD family LX00_01170 PF00701 Dihydrodipicolinate synthetase family LX00_01180 PF00155 Aminotransferase class I and II LX00_01180 PF00392 Bacterial regulatory proteins, gntR family LX00_01185 PF13335 Magnesium chelatase, subunit ChlI C-terminal LX00_01185 PF01078 Magnesium chelatase, subunit ChlI LX00_01195 PF00543 Nitrogen regulatory protein P-II LX00_01200 PF00909 Ammonium Transporter Family LX00_01205 PF03477 ATP cone domain LX00_01210 PF01872 RibD C-terminal domain LX00_01210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LX00_01220 PF00677 Lumazine binding domain LX00_01240 PF00883 Cytosol aminopeptidase family, catalytic domain LX00_01240 PF02789 Cytosol aminopeptidase family, N-terminal domain LX00_01250 PF03739 Lipopolysaccharide export system permease LptF/LptG LX00_01255 PF01676 Metalloenzyme superfamily LX00_01255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LX00_01260 PF03572 Peptidase family S41 LX00_01260 PF00595 PDZ domain LX00_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_01270 PF00512 His Kinase A (phospho-acceptor) domain LX00_01275 PF00196 Bacterial regulatory proteins, luxR family LX00_01275 PF00072 Response regulator receiver domain LX00_01280 PF00768 D-alanyl-D-alanine carboxypeptidase LX00_01285 PF00291 Pyridoxal-phosphate dependent enzyme LX00_01290 PF01842 ACT domain LX00_01290 PF00742 Homoserine dehydrogenase LX00_01290 PF03447 Homoserine dehydrogenase, NAD binding domain LX00_01295 PF10411 Disulfide bond isomerase protein N-terminus LX00_01295 PF13098 Thioredoxin-like domain LX00_01300 PF02899 Phage integrase, N-terminal SAM-like domain LX00_01300 PF00589 Phage integrase family LX00_01310 PF07670 Nucleoside recognition LX00_01310 PF07664 Ferrous iron transport protein B C terminus LX00_01310 PF02421 Ferrous iron transport protein B LX00_01320 PF08245 Mur ligase middle domain LX00_01320 PF02875 Mur ligase family, glutamate ligase domain LX00_01325 PF01098 Cell cycle protein LX00_01330 PF00749 tRNA synthetases class I (E and Q), catalytic domain LX00_01335 PF01258 Prokaryotic dksA/traR C4-type zinc finger LX00_01340 PF00149 Calcineurin-like phosphoesterase LX00_01345 PF00293 NUDIX domain LX00_01350 PF01964 Radical SAM ThiC family LX00_01350 PF13667 ThiC-associated domain LX00_01365 PF00892 EamA-like transporter family LX00_01370 PF02321 Outer membrane efflux protein LX00_01375 PF01895 PhoU domain LX00_01380 PF04362 Bacterial Fe(2+) trafficking LX00_01385 PF00206 Lyase LX00_01385 PF14698 Argininosuccinate lyase C-terminal LX00_01390 PF06580 Histidine kinase LX00_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_01390 PF07694 5TMR of 5TMR-LYT LX00_01395 PF00072 Response regulator receiver domain LX00_01395 PF04397 LytTr DNA-binding domain LX00_01400 PF03900 Porphobilinogen deaminase, C-terminal domain LX00_01400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LX00_01425 PF00816 H-NS histone family LX00_01440 PF03958 Bacterial type II/III secretion system short domain LX00_01440 PF00263 Bacterial type II and III secretion system protein LX00_01445 PF12401 Protein of unknown function (DUF2662) LX00_01445 PF00498 FHA domain LX00_01450 PF13419 Haloacid dehalogenase-like hydrolase LX00_01455 PF00425 chorismate binding enzyme LX00_01455 PF04715 Anthranilate synthase component I, N terminal region LX00_01485 PF00009 Elongation factor Tu GTP binding domain LX00_01485 PF03143 Elongation factor Tu C-terminal domain LX00_01485 PF03144 Elongation factor Tu domain 2 LX00_01495 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LX00_01500 PF00467 KOW motif LX00_01500 PF02357 Transcription termination factor nusG LX00_01505 PF03946 Ribosomal protein L11, N-terminal domain LX00_01505 PF00298 Ribosomal protein L11, RNA binding domain LX00_01510 PF00687 Ribosomal protein L1p/L10e family LX00_01515 PF00466 Ribosomal protein L10 LX00_01520 PF16320 Ribosomal protein L7/L12 dimerisation domain LX00_01520 PF00542 Ribosomal protein L7/L12 C-terminal domain LX00_01525 PF10385 RNA polymerase beta subunit external 1 domain LX00_01525 PF04561 RNA polymerase Rpb2, domain 2 LX00_01525 PF04565 RNA polymerase Rpb2, domain 3 LX00_01525 PF00562 RNA polymerase Rpb2, domain 6 LX00_01525 PF04563 RNA polymerase beta subunit LX00_01525 PF04560 RNA polymerase Rpb2, domain 7 LX00_01530 PF05000 RNA polymerase Rpb1, domain 4 LX00_01530 PF04998 RNA polymerase Rpb1, domain 5 LX00_01530 PF00623 RNA polymerase Rpb1, domain 2 LX00_01530 PF04997 RNA polymerase Rpb1, domain 1 LX00_01530 PF04983 RNA polymerase Rpb1, domain 3 LX00_01550 PF00561 alpha/beta hydrolase fold LX00_01555 PF13726 Na+-H+ antiporter family LX00_01555 PF03553 Na+/H+ antiporter family LX00_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_01570 PF00183 Hsp90 protein LX00_01585 PF01323 DSBA-like thioredoxin domain LX00_01595 PF00376 MerR family regulatory protein LX00_01595 PF09278 MerR, DNA binding LX00_01610 PF02803 Thiolase, C-terminal domain LX00_01610 PF00108 Thiolase, N-terminal domain LX00_01615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_01615 PF00378 Enoyl-CoA hydratase/isomerase LX00_01615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_01640 PF01541 GIY-YIG catalytic domain LX00_01640 PF08459 UvrC Helix-hairpin-helix N-terminal LX00_01640 PF02151 UvrB/uvrC motif LX00_01650 PF01066 CDP-alcohol phosphatidyltransferase LX00_01655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LX00_01655 PF02805 Metal binding domain of Ada LX00_01655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LX00_01655 PF12833 Helix-turn-helix domain LX00_01680 PF13533 Biotin-lipoyl like LX00_01685 PF03652 Holliday junction resolvase LX00_01690 PF02622 Uncharacterized ACR, COG1678 LX00_01695 PF02463 RecF/RecN/SMC N terminal domain LX00_01705 PF06865 Pyrimidine/purine nucleoside phosphorylase LX00_01710 PF00588 SpoU rRNA Methylase family LX00_01710 PF08032 RNA 2'-O ribose methyltransferase substrate binding LX00_01720 PF01121 Dephospho-CoA kinase LX00_01725 PF06750 Bacterial Peptidase A24 N-terminal domain LX00_01725 PF01478 Type IV leader peptidase family LX00_01730 PF00482 Type II secretion system (T2SS), protein F LX00_01735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LX00_01735 PF00437 Type II/IV secretion system protein LX00_01740 PF00121 Triosephosphate isomerase LX00_01745 PF03840 Preprotein translocase SecG subunit LX00_01770 PF17384 RimP C-terminal SH3 domain LX00_01770 PF02576 RimP N-terminal domain LX00_01775 PF13184 NusA-like KH domain LX00_01775 PF08529 NusA N-terminal domain LX00_01775 PF00575 S1 RNA binding domain LX00_01780 PF04760 Translation initiation factor IF-2, N-terminal region LX00_01780 PF08364 Bacterial translation initiation factor IF-2 associated region LX00_01780 PF11987 Translation-initiation factor 2 LX00_01780 PF00009 Elongation factor Tu GTP binding domain LX00_01785 PF02033 Ribosome-binding factor A LX00_01795 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LX00_01805 PF00361 Proton-conducting membrane transporter LX00_01810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LX00_01815 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LX00_01815 PF00361 Proton-conducting membrane transporter LX00_01815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LX00_01815 PF13244 Domain of unknown function (DUF4040) LX00_01830 PF01502 Phosphoribosyl-AMP cyclohydrolase LX00_01835 PF01494 FAD binding domain LX00_01840 PF03109 ABC1 family LX00_01850 PF01209 ubiE/COQ5 methyltransferase family LX00_01860 PF03976 Polyphosphate kinase 2 (PPK2) LX00_01870 PF17946 RecC C-terminal domain LX00_01875 PF13361 UvrD-like helicase C-terminal domain LX00_01875 PF00580 UvrD/REP helicase N-terminal domain LX00_01875 PF12705 PD-(D/E)XK nuclease superfamily LX00_01880 PF13538 UvrD-like helicase C-terminal domain LX00_01890 PF00312 Ribosomal protein S15 LX00_01895 PF01138 3' exoribonuclease family, domain 1 LX00_01895 PF00013 KH domain LX00_01895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LX00_01895 PF03725 3' exoribonuclease family, domain 2 LX00_01895 PF00575 S1 RNA binding domain LX00_01900 PF01544 CorA-like Mg2+ transporter protein LX00_01910 PF00226 DnaJ domain LX00_01910 PF01556 DnaJ C terminal domain LX00_01920 PF01430 Hsp33 protein LX00_01925 PF02254 TrkA-N domain LX00_01925 PF00999 Sodium/hydrogen exchanger family LX00_01930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LX00_01930 PF18074 Primosomal protein N C-terminal domain LX00_01930 PF00270 DEAD/DEAH box helicase LX00_01930 PF00271 Helicase conserved C-terminal domain LX00_01930 PF17764 3′ DNA-binding domain (3′BD) LX00_01935 PF00482 Type II secretion system (T2SS), protein F LX00_01940 PF07963 Prokaryotic N-terminal methylation motif LX00_01940 PF08334 Type II secretion system (T2SS), protein G LX00_01950 PF01588 Putative tRNA binding domain LX00_01955 PF00795 Carbon-nitrogen hydrolase LX00_01960 PF03471 Transporter associated domain LX00_01960 PF00571 CBS domain LX00_01965 PF01206 Sulfurtransferase TusA LX00_01980 PF01177 Asp/Glu/Hydantoin racemase LX00_01990 PF00762 Ferrochelatase LX00_01995 PF00753 Metallo-beta-lactamase superfamily LX00_02000 PF03884 DNA gyrase inhibitor YacG LX00_02020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LX00_02030 PF01197 Ribosomal protein L31 LX00_02035 PF03109 ABC1 family LX00_02040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LX00_02040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_02045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LX00_02045 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_02045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_02050 PF01554 MatE LX00_02060 PF06969 HemN C-terminal domain LX00_02060 PF04055 Radical SAM superfamily LX00_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_02070 PF03466 LysR substrate binding domain LX00_02080 PF00501 AMP-binding enzyme LX00_02080 PF13193 AMP-binding enzyme C-terminal domain LX00_02085 PF12111 Polyribonucleotide phosphorylase C terminal LX00_02085 PF00575 S1 RNA binding domain LX00_02085 PF10150 Ribonuclease E/G family LX00_02090 PF01479 S4 domain LX00_02090 PF00849 RNA pseudouridylate synthase LX00_02095 PF13419 Haloacid dehalogenase-like hydrolase LX00_02100 PF13280 WYL domain LX00_02100 PF08279 HTH domain LX00_02105 PF02798 Glutathione S-transferase, N-terminal domain LX00_02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_02115 PF03466 LysR substrate binding domain LX00_02120 PF12706 Beta-lactamase superfamily domain LX00_02125 PF00141 Peroxidase LX00_02130 PF05524 PEP-utilising enzyme, N-terminal LX00_02130 PF01590 GAF domain LX00_02130 PF00391 PEP-utilising enzyme, mobile domain LX00_02130 PF02896 PEP-utilising enzyme, TIM barrel domain LX00_02135 PF00293 NUDIX domain LX00_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_02155 PF03466 LysR substrate binding domain LX00_02165 PF00330 Aconitase family (aconitate hydratase) LX00_02170 PF00694 Aconitase C-terminal domain LX00_02180 PF00180 Isocitrate/isopropylmalate dehydrogenase LX00_02195 PF01176 Translation initiation factor 1A / IF-1 LX00_02205 PF01416 tRNA pseudouridine synthase LX00_02225 PF01118 Semialdehyde dehydrogenase, NAD binding domain LX00_02225 PF02774 Semialdehyde dehydrogenase, dimerisation domain LX00_02235 PF00375 Sodium:dicarboxylate symporter family LX00_02245 PF03279 Bacterial lipid A biosynthesis acyltransferase LX00_02250 PF01810 LysE type translocator LX00_02265 PF08240 Alcohol dehydrogenase GroES-like domain LX00_02265 PF00107 Zinc-binding dehydrogenase LX00_02270 PF01638 HxlR-like helix-turn-helix LX00_02280 PF01131 DNA topoisomerase LX00_02280 PF08272 Topoisomerase I zinc-ribbon-like LX00_02280 PF01751 Toprim domain LX00_02280 PF01396 Topoisomerase DNA binding C4 zinc finger LX00_02295 PF00580 UvrD/REP helicase N-terminal domain LX00_02295 PF13361 UvrD-like helicase C-terminal domain LX00_02300 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LX00_02320 PF00999 Sodium/hydrogen exchanger family LX00_02320 PF02254 TrkA-N domain LX00_02325 PF00471 Ribosomal protein L33 LX00_02330 PF00830 Ribosomal L28 family LX00_02335 PF00171 Aldehyde dehydrogenase family LX00_02345 PF00551 Formyl transferase LX00_02345 PF01842 ACT domain LX00_02355 PF01618 MotA/TolQ/ExbB proton channel family LX00_02365 PF01625 Peptide methionine sulfoxide reductase LX00_02375 PF00186 Dihydrofolate reductase LX00_02380 PF00303 Thymidylate synthase LX00_02395 PF01790 Prolipoprotein diacylglyceryl transferase LX00_02415 PF00902 Sec-independent protein translocase protein (TatC) LX00_02420 PF02416 mttA/Hcf106 family LX00_02425 PF02416 mttA/Hcf106 family LX00_02435 PF01725 Ham1 family LX00_02445 PF07021 Methionine biosynthesis protein MetW LX00_02445 PF00561 alpha/beta hydrolase fold LX00_02450 PF00561 alpha/beta hydrolase fold LX00_02455 PF08502 LeuA allosteric (dimerisation) domain LX00_02455 PF00682 HMGL-like LX00_02460 PF13640 2OG-Fe(II) oxygenase superfamily LX00_02460 PF18331 PKHD-type hydroxylase C-terminal domain LX00_02465 PF07715 TonB-dependent Receptor Plug Domain LX00_02465 PF00593 TonB dependent receptor LX00_02470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_02470 PF05697 Bacterial trigger factor protein (TF) LX00_02470 PF05698 Bacterial trigger factor protein (TF) C-terminus LX00_02475 PF00574 Clp protease LX00_02480 PF07724 AAA domain (Cdc48 subfamily) LX00_02480 PF06689 ClpX C4-type zinc finger LX00_02480 PF10431 C-terminal, D2-small domain, of ClpB protein LX00_02495 PF05683 Fumarase C-terminus LX00_02495 PF05681 Fumarate hydratase (Fumerase) LX00_02500 PF07085 DRTGG domain LX00_02500 PF01515 Phosphate acetyl/butaryl transferase LX00_02505 PF00871 Acetokinase family LX00_02515 PF00920 Dehydratase family LX00_02520 PF01081 KDPG and KHG aldolase LX00_02525 PF02447 GntP family permease LX00_02530 PF01202 Shikimate kinase LX00_02535 PF00171 Aldehyde dehydrogenase family LX00_02540 PF00171 Aldehyde dehydrogenase family LX00_02545 PF00561 alpha/beta hydrolase fold LX00_02555 PF00933 Glycosyl hydrolase family 3 N terminal domain LX00_02560 PF00595 PDZ domain LX00_02560 PF17804 Tail specific protease N-terminal domain LX00_02560 PF11818 C-terminal domain of tail specific protease (DUF3340) LX00_02560 PF03572 Peptidase family S41 LX00_02565 PF13439 Glycosyltransferase Family 4 LX00_02565 PF00534 Glycosyl transferases group 1 LX00_02570 PF01569 PAP2 superfamily LX00_02575 PF04384 Iron-sulphur cluster assembly LX00_02580 PF00334 Nucleoside diphosphate kinase LX00_02585 PF04055 Radical SAM superfamily LX00_02595 PF13464 Domain of unknown function (DUF4115) LX00_02600 PF04551 GcpE protein LX00_02605 PF13393 Histidyl-tRNA synthetase LX00_02605 PF03129 Anticodon binding domain LX00_02615 PF13360 PQQ-like domain LX00_02620 PF01926 50S ribosome-binding GTPase LX00_02620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LX00_02630 PF02556 Preprotein translocase subunit SecB LX00_02635 PF00462 Glutaredoxin LX00_02645 PF03193 RsgA GTPase LX00_02650 PF00929 Exonuclease LX00_02665 PF02321 Outer membrane efflux protein LX00_02670 PF12704 MacB-like periplasmic core domain LX00_02670 PF00005 ABC transporter LX00_02670 PF02687 FtsX-like permease family LX00_02675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_02690 PF08264 Anticodon-binding domain of tRNA LX00_02690 PF00133 tRNA synthetases class I (I, L, M and V) LX00_02690 PF09334 tRNA synthetases class I (M) LX00_02690 PF13603 Leucyl-tRNA synthetase, Domain 2 LX00_02700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LX00_02700 PF00205 Thiamine pyrophosphate enzyme, central domain LX00_02700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LX00_02705 PF10369 Small subunit of acetolactate synthase LX00_02710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LX00_02710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LX00_02715 PF03707 Bacterial signalling protein N terminal repeat LX00_02715 PF00990 Diguanylate cyclase, GGDEF domain LX00_02715 PF00563 EAL domain LX00_02735 PF00009 Elongation factor Tu GTP binding domain LX00_02735 PF03144 Elongation factor Tu domain 2 LX00_02735 PF16658 Class II release factor RF3, C-terminal domain LX00_02750 PF01026 TatD related DNase LX00_02755 PF00694 Aconitase C-terminal domain LX00_02755 PF00330 Aconitase family (aconitate hydratase) LX00_02765 PF00899 ThiF family LX00_02770 PF03466 LysR substrate binding domain LX00_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_02780 PF01207 Dihydrouridine synthase (Dus) LX00_02785 PF07690 Major Facilitator Superfamily LX00_02795 PF00892 EamA-like transporter family LX00_02800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LX00_02800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LX00_02805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LX00_02810 PF02233 NAD(P) transhydrogenase beta subunit LX00_02815 PF00106 short chain dehydrogenase LX00_02825 PF01261 Xylose isomerase-like TIM barrel LX00_02830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LX00_02830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LX00_02835 PF00378 Enoyl-CoA hydratase/isomerase LX00_02840 PF00672 HAMP domain LX00_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_02840 PF00512 His Kinase A (phospho-acceptor) domain LX00_02840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LX00_02840 PF01627 Hpt domain LX00_02840 PF00072 Response regulator receiver domain LX00_02845 PF00291 Pyridoxal-phosphate dependent enzyme LX00_02855 PF05958 tRNA (Uracil-5-)-methyltransferase LX00_02860 PF02824 TGS domain LX00_02860 PF04607 Region found in RelA / SpoT proteins LX00_02860 PF13291 ACT domain LX00_02870 PF03819 MazG nucleotide pyrophosphohydrolase domain LX00_02880 PF01743 Poly A polymerase head domain LX00_02880 PF12627 Probable RNA and SrmB- binding site of polymerase A LX00_02880 PF12626 Polymerase A arginine-rich C-terminus LX00_02885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LX00_02890 PF02548 Ketopantoate hydroxymethyltransferase LX00_02895 PF02569 Pantoate-beta-alanine ligase LX00_02900 PF03668 P-loop ATPase protein family LX00_02905 PF00381 PTS HPr component phosphorylation site LX00_02910 PF04751 Protein of unknown function (DUF615) LX00_02915 PF00501 AMP-binding enzyme LX00_02915 PF13193 AMP-binding enzyme C-terminal domain LX00_02920 PF03129 Anticodon binding domain LX00_02920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LX00_02920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LX00_02920 PF02824 TGS domain LX00_02925 PF05198 Translation initiation factor IF-3, N-terminal domain LX00_02925 PF00707 Translation initiation factor IF-3, C-terminal domain LX00_02930 PF00043 Glutathione S-transferase, C-terminal domain LX00_02930 PF02798 Glutathione S-transferase, N-terminal domain LX00_02935 PF09335 SNARE associated Golgi protein LX00_02940 PF07690 Major Facilitator Superfamily LX00_02945 PF01632 Ribosomal protein L35 LX00_02950 PF00453 Ribosomal protein L20 LX00_02965 PF01409 tRNA synthetases class II core domain (F) LX00_02965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LX00_02970 PF01588 Putative tRNA binding domain LX00_02970 PF03147 Ferredoxin-fold anticodon binding domain LX00_02970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LX00_02970 PF03483 B3/4 domain LX00_02970 PF03484 tRNA synthetase B5 domain LX00_02975 PF00216 Bacterial DNA-binding protein LX00_02985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LX00_02985 PF07497 Rho termination factor, RNA-binding domain LX00_02985 PF07498 Rho termination factor, N-terminal domain LX00_02990 PF00085 Thioredoxin LX00_02995 PF02541 Ppx/GppA phosphatase family LX00_03000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LX00_03005 PF09179 TilS substrate binding domain LX00_03005 PF11734 TilS substrate C-terminal domain LX00_03005 PF01171 PP-loop family LX00_03010 PF14748 Pyrroline-5-carboxylate reductase dimerisation LX00_03010 PF03807 NADP oxidoreductase coenzyme F420-dependent LX00_03015 PF02325 YGGT family LX00_03020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LX00_03020 PF00476 DNA polymerase family A LX00_03020 PF01367 5'-3' exonuclease, C-terminal SAM fold LX00_03020 PF01612 3'-5' exonuclease LX00_03040 PF00437 Type II/IV secretion system protein LX00_03045 PF02566 OsmC-like protein LX00_03050 PF01047 MarR family LX00_03060 PF00795 Carbon-nitrogen hydrolase LX00_03105 PF04552 Sigma-54, DNA binding domain LX00_03105 PF04963 Sigma-54 factor, core binding domain LX00_03105 PF00309 Sigma-54 factor, Activator interacting domain (AID) LX00_03110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LX00_03115 PF01722 BolA-like protein LX00_03120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LX00_03125 PF01634 ATP phosphoribosyltransferase LX00_03130 PF00815 Histidinol dehydrogenase LX00_03135 PF00155 Aminotransferase class I and II LX00_03140 PF04715 Anthranilate synthase component I, N terminal region LX00_03140 PF00425 chorismate binding enzyme LX00_03180 PF00293 NUDIX domain LX00_03185 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_03190 PF00814 Glycoprotease family LX00_03195 PF04445 Putative SAM-dependent methyltransferase LX00_03205 PF00756 Putative esterase LX00_03215 PF00834 Ribulose-phosphate 3 epimerase family LX00_03230 PF00394 Multicopper oxidase LX00_03230 PF07731 Multicopper oxidase LX00_03230 PF07732 Multicopper oxidase LX00_03245 PF00893 Small Multidrug Resistance protein LX00_03250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LX00_03250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LX00_03255 PF01960 ArgJ family LX00_03260 PF02445 Quinolinate synthetase A protein LX00_03285 PF00962 Adenosine/AMP deaminase LX00_03290 PF08240 Alcohol dehydrogenase GroES-like domain LX00_03290 PF00107 Zinc-binding dehydrogenase LX00_03295 PF03466 LysR substrate binding domain LX00_03295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_03300 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_03300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_03300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_03305 PF07690 Major Facilitator Superfamily LX00_03310 PF02515 CoA-transferase family III LX00_03320 PF14537 Cytochrome c3 LX00_03320 PF00890 FAD binding domain LX00_03325 PF03466 LysR substrate binding domain LX00_03325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_03335 PF07690 Major Facilitator Superfamily LX00_03340 PF03466 LysR substrate binding domain LX00_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_03370 PF08267 Cobalamin-independent synthase, N-terminal domain LX00_03370 PF01717 Cobalamin-independent synthase, Catalytic domain LX00_03375 PF01613 Flavin reductase like domain LX00_03390 PF17074 Darcynin, domain of unknown function LX00_03405 PF17074 Darcynin, domain of unknown function LX00_03430 PF02567 Phenazine biosynthesis-like protein LX00_03440 PF00268 Ribonucleotide reductase, small chain LX00_03450 PF03477 ATP cone domain LX00_03450 PF00317 Ribonucleotide reductase, all-alpha domain LX00_03450 PF02867 Ribonucleotide reductase, barrel domain LX00_03460 PF00072 Response regulator receiver domain LX00_03460 PF00486 Transcriptional regulatory protein, C terminal LX00_03465 PF00672 HAMP domain LX00_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_03465 PF00512 His Kinase A (phospho-acceptor) domain LX00_03475 PF17151 Periplasmic sensor domain LX00_03475 PF00990 Diguanylate cyclase, GGDEF domain LX00_03480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LX00_03485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LX00_03490 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LX00_03490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LX00_03500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LX00_03500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LX00_03500 PF10531 SLBB domain LX00_03505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LX00_03505 PF00384 Molybdopterin oxidoreductase LX00_03505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LX00_03510 PF00146 NADH dehydrogenase LX00_03515 PF12838 4Fe-4S dicluster domain LX00_03520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LX00_03525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LX00_03530 PF00361 Proton-conducting membrane transporter LX00_03530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LX00_03535 PF00361 Proton-conducting membrane transporter LX00_03540 PF00361 Proton-conducting membrane transporter LX00_03550 PF00313 'Cold-shock' DNA-binding domain LX00_03555 PF03466 LysR substrate binding domain LX00_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_03560 PF00970 Oxidoreductase FAD-binding domain LX00_03560 PF00175 Oxidoreductase NAD-binding domain LX00_03575 PF05552 Conserved TM helix LX00_03590 PF00291 Pyridoxal-phosphate dependent enzyme LX00_03595 PF13533 Biotin-lipoyl like LX00_03620 PF09334 tRNA synthetases class I (M) LX00_03620 PF01588 Putative tRNA binding domain LX00_03630 PF10609 NUBPL iron-transfer P-loop NTPase LX00_03635 PF01048 Phosphorylase superfamily LX00_03650 PF00692 dUTPase LX00_03680 PF01207 Dihydrouridine synthase (Dus) LX00_03690 PF02881 SRP54-type protein, helical bundle domain LX00_03690 PF02978 Signal peptide binding domain LX00_03690 PF00448 SRP54-type protein, GTPase domain LX00_03695 PF03309 Type III pantothenate kinase LX00_03705 PF01925 Sulfite exporter TauE/SafE LX00_03715 PF02463 RecF/RecN/SMC N terminal domain LX00_03715 PF06470 SMC proteins Flexible Hinge Domain LX00_03725 PF03120 NAD-dependent DNA ligase OB-fold domain LX00_03725 PF01653 NAD-dependent DNA ligase adenylation domain LX00_03725 PF00533 BRCA1 C Terminus (BRCT) domain LX00_03725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LX00_03725 PF12826 Helix-hairpin-helix motif LX00_03730 PF00210 Ferritin-like domain LX00_03735 PF07690 Major Facilitator Superfamily LX00_03740 PF00982 Glycosyltransferase family 20 LX00_03745 PF02358 Trehalose-phosphatase LX00_03750 PF08241 Methyltransferase domain LX00_03750 PF12697 Alpha/beta hydrolase family LX00_03755 PF06968 Biotin and Thiamin Synthesis associated domain LX00_03755 PF04055 Radical SAM superfamily LX00_03755 PF00202 Aminotransferase class-III LX00_03760 PF00155 Aminotransferase class I and II LX00_03775 PF01479 S4 domain LX00_03775 PF00849 RNA pseudouridylate synthase LX00_03780 PF04079 Segregation and condensation complex subunit ScpB LX00_03785 PF02616 Segregation and condensation protein ScpA LX00_03790 PF01300 Telomere recombination LX00_03795 PF04315 Elongation factor P hydroxylase LX00_03800 PF02620 Large ribosomal RNA subunit accumulation protein YceD LX00_03805 PF01783 Ribosomal L32p protein family LX00_03810 PF00698 Acyl transferase domain LX00_03820 PF00550 Phosphopantetheine attachment site LX00_03825 PF04972 BON domain LX00_03825 PF01476 LysM domain LX00_03830 PF03070 TENA/THI-4/PQQC family LX00_03830 PF08543 Phosphomethylpyrimidine kinase LX00_03830 PF02581 Thiamine monophosphate synthase LX00_03840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LX00_03855 PF02261 Aspartate decarboxylase LX00_03860 PF01195 Peptidyl-tRNA hydrolase LX00_03865 PF01386 Ribosomal L25p family LX00_03870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LX00_03870 PF14572 Phosphoribosyl synthetase-associated domain LX00_03890 PF00288 GHMP kinases N terminal domain LX00_03890 PF08544 GHMP kinases C terminal LX00_03895 PF03550 Outer membrane lipoprotein LolB LX00_03905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LX00_03905 PF01488 Shikimate / quinate 5-dehydrogenase LX00_03905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LX00_03910 PF10410 DnaB-helicase binding domain of primase LX00_03910 PF08275 DNA primase catalytic core, N-terminal domain LX00_03910 PF08278 DNA primase DnaG DnaB-binding LX00_03910 PF01807 CHC2 zinc finger LX00_03915 PF13525 Outer membrane lipoprotein LX00_03920 PF01479 S4 domain LX00_03920 PF00849 RNA pseudouridylate synthase LX00_03930 PF03358 NADPH-dependent FMN reductase LX00_03935 PF01668 SmpB protein LX00_04010 PF00772 DnaB-like helicase N terminal domain LX00_04010 PF03796 DnaB-like helicase C terminal domain LX00_04170 PF01551 Peptidase family M23 LX00_04170 PF10145 Phage-related minor tail protein LX00_04170 PF01464 Transglycosylase SLT domain LX00_04220 PF13356 Arm DNA-binding domain LX00_04220 PF00589 Phage integrase family LX00_04225 PF01467 Cytidylyltransferase-like LX00_04230 PF00037 4Fe-4S binding domain LX00_04245 PF03466 LysR substrate binding domain LX00_04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_04250 PF00180 Isocitrate/isopropylmalate dehydrogenase LX00_04255 PF02028 BCCT, betaine/carnitine/choline family transporter LX00_04260 PF07859 alpha/beta hydrolase fold LX00_04265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LX00_04265 PF00355 Rieske [2Fe-2S] domain LX00_04270 PF00171 Aldehyde dehydrogenase family LX00_04275 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_04275 PF00970 Oxidoreductase FAD-binding domain LX00_04275 PF00175 Oxidoreductase NAD-binding domain LX00_04290 PF02540 NAD synthase LX00_04290 PF00795 Carbon-nitrogen hydrolase LX00_04300 PF02678 Pirin LX00_04300 PF05726 Pirin C-terminal cupin domain LX00_04310 PF02801 Beta-ketoacyl synthase, C-terminal domain LX00_04310 PF00109 Beta-ketoacyl synthase, N-terminal domain LX00_04320 PF00164 Ribosomal protein S12/S23 LX00_04325 PF00177 Ribosomal protein S7p/S5e LX00_04330 PF00679 Elongation factor G C-terminus LX00_04330 PF00009 Elongation factor Tu GTP binding domain LX00_04330 PF03764 Elongation factor G, domain IV LX00_04330 PF14492 Elongation Factor G, domain II LX00_04330 PF03144 Elongation factor Tu domain 2 LX00_04335 PF00009 Elongation factor Tu GTP binding domain LX00_04335 PF03144 Elongation factor Tu domain 2 LX00_04335 PF03143 Elongation factor Tu C-terminal domain LX00_04350 PF00583 Acetyltransferase (GNAT) family LX00_04355 PF04377 Arginine-tRNA-protein transferase, C terminus LX00_04355 PF04376 Arginine-tRNA-protein transferase, N terminus LX00_04360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LX00_04365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_04370 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LX00_04370 PF01580 FtsK/SpoIIIE family LX00_04370 PF09397 Ftsk gamma domain LX00_04370 PF17854 FtsK alpha domain LX00_04375 PF01810 LysE type translocator LX00_04385 PF03776 Septum formation topological specificity factor MinE LX00_04390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LX00_04395 PF03775 Septum formation inhibitor MinC, C-terminal domain LX00_04405 PF01553 Acyltransferase LX00_04410 PF13488 Glycine zipper LX00_04410 PF00691 OmpA family LX00_04415 PF13361 UvrD-like helicase C-terminal domain LX00_04415 PF00580 UvrD/REP helicase N-terminal domain LX00_04420 PF00692 dUTPase LX00_04425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LX00_04425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LX00_04425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LX00_04425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LX00_04430 PF00696 Amino acid kinase family LX00_04440 PF13230 Glutamine amidotransferases class-II LX00_04445 PF01814 Hemerythrin HHE cation binding domain LX00_04455 PF03658 RnfH family Ubiquitin LX00_04460 PF04355 SmpA / OmlA family LX00_04465 PF01475 Ferric uptake regulator family LX00_04470 PF00437 Type II/IV secretion system protein LX00_04475 PF00437 Type II/IV secretion system protein LX00_04480 PF01168 Alanine racemase, N-terminal domain LX00_04495 PF12320 Type 5 capsule protein repressor C-terminal domain LX00_04495 PF00149 Calcineurin-like phosphoesterase LX00_04515 PF08338 Domain of unknown function (DUF1731) LX00_04515 PF01370 NAD dependent epimerase/dehydratase family LX00_04520 PF01266 FAD dependent oxidoreductase LX00_04525 PF00490 Delta-aminolevulinic acid dehydratase LX00_04530 PF03061 Thioesterase superfamily LX00_04535 PF13533 Biotin-lipoyl like LX00_04540 PF07690 Major Facilitator Superfamily LX00_04550 PF01867 CRISPR associated protein Cas1 LX00_04560 PF09615 CRISPR-associated protein (Cas_Csy3) LX00_04575 PF18019 HD domain LX00_04605 PF00083 Sugar (and other) transporter LX00_04610 PF00701 Dihydrodipicolinate synthetase family LX00_04635 PF13520 Amino acid permease LX00_04655 PF06039 Malate:quinone oxidoreductase (Mqo) LX00_04660 PF00732 GMC oxidoreductase LX00_04660 PF05199 GMC oxidoreductase LX00_04665 PF00171 Aldehyde dehydrogenase family LX00_04670 PF13977 BetI-type transcriptional repressor, C-terminal LX00_04670 PF00440 Bacterial regulatory proteins, tetR family LX00_04675 PF02028 BCCT, betaine/carnitine/choline family transporter LX00_04680 PF02028 BCCT, betaine/carnitine/choline family transporter LX00_04690 PF03061 Thioesterase superfamily LX00_04700 PF07683 Cobalamin synthesis protein cobW C-terminal domain LX00_04700 PF02492 CobW/HypB/UreG, nucleotide-binding domain LX00_04705 PF00375 Sodium:dicarboxylate symporter family LX00_04710 PF07152 YaeQ protein LX00_04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_04720 PF14883 Hypothetical glycosyl hydrolase family 13 LX00_04720 PF01522 Polysaccharide deacetylase LX00_04725 PF00535 Glycosyl transferase family 2 LX00_04735 PF00378 Enoyl-CoA hydratase/isomerase LX00_04750 PF09339 IclR helix-turn-helix domain LX00_04750 PF01614 Bacterial transcriptional regulator LX00_04755 PF00355 Rieske [2Fe-2S] domain LX00_04765 PF00355 Rieske [2Fe-2S] domain LX00_04775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LX00_04780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_04780 PF14759 Reductase C-terminal LX00_04785 PF07690 Major Facilitator Superfamily LX00_04795 PF12697 Alpha/beta hydrolase family LX00_04805 PF01958 Domain of unknown function DUF108 LX00_04805 PF03447 Homoserine dehydrogenase, NAD binding domain LX00_04810 PF00171 Aldehyde dehydrogenase family LX00_04815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LX00_04815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LX00_04815 PF00205 Thiamine pyrophosphate enzyme, central domain LX00_04825 PF07690 Major Facilitator Superfamily LX00_04830 PF01327 Polypeptide deformylase LX00_04835 PF04960 Glutaminase LX00_04840 PF12833 Helix-turn-helix domain LX00_04840 PF02311 AraC-like ligand binding domain LX00_04845 PF07690 Major Facilitator Superfamily LX00_04850 PF01263 Aldose 1-epimerase LX00_04860 PF03466 LysR substrate binding domain LX00_04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_04870 PF07690 Major Facilitator Superfamily LX00_04875 PF00456 Transketolase, thiamine diphosphate binding domain LX00_04880 PF02779 Transketolase, pyrimidine binding domain LX00_04880 PF02780 Transketolase, C-terminal domain LX00_04885 PF02965 Vitamin B12 dependent methionine synthase, activation domain LX00_04885 PF00809 Pterin binding enzyme LX00_04885 PF02574 Homocysteine S-methyltransferase LX00_04885 PF02310 B12 binding domain LX00_04885 PF02607 B12 binding domain LX00_04895 PF01384 Phosphate transporter family LX00_04900 PF00291 Pyridoxal-phosphate dependent enzyme LX00_04915 PF03781 Sulfatase-modifying factor enzyme 1 LX00_04920 PF00884 Sulfatase LX00_04930 PF01106 NifU-like domain LX00_04930 PF01521 Iron-sulphur cluster biosynthesis LX00_04935 PF07715 TonB-dependent Receptor Plug Domain LX00_04935 PF00593 TonB dependent receptor LX00_04960 PF00561 alpha/beta hydrolase fold LX00_04965 PF00484 Carbonic anhydrase LX00_04970 PF13472 GDSL-like Lipase/Acylhydrolase family LX00_04975 PF00005 ABC transporter LX00_04985 PF01694 Rhomboid family LX00_04990 PF00912 Transglycosylase LX00_04995 PF02503 Polyphosphate kinase middle domain LX00_04995 PF13090 Polyphosphate kinase C-terminal domain 2 LX00_04995 PF17941 Polyphosphate kinase C-terminal domain 1 LX00_04995 PF13089 Polyphosphate kinase N-terminal domain LX00_05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_05005 PF03466 LysR substrate binding domain LX00_05010 PF00561 alpha/beta hydrolase fold LX00_05015 PF18113 Rubredoxin binding C-terminal domain LX00_05015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_05020 PF00301 Rubredoxin LX00_05035 PF00152 tRNA synthetases class II (D, K and N) LX00_05035 PF01336 OB-fold nucleic acid binding domain LX00_05040 PF14052 Capsule assembly protein Wzi LX00_05050 PF01507 Phosphoadenosine phosphosulfate reductase family LX00_05055 PF00009 Elongation factor Tu GTP binding domain LX00_05070 PF03600 Citrate transporter LX00_05075 PF01595 Cyclin M transmembrane N-terminal domain LX00_05075 PF03471 Transporter associated domain LX00_05075 PF00571 CBS domain LX00_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_05080 PF03466 LysR substrate binding domain LX00_05085 PF00463 Isocitrate lyase family LX00_05105 PF01774 UreD urease accessory protein LX00_05110 PF00547 Urease, gamma subunit LX00_05115 PF00699 Urease beta subunit LX00_05125 PF00449 Urease alpha-subunit, N-terminal domain LX00_05125 PF01979 Amidohydrolase family LX00_05130 PF05194 UreE urease accessory protein, C-terminal domain LX00_05130 PF02814 UreE urease accessory protein, N-terminal domain LX00_05135 PF01730 UreF LX00_05140 PF02492 CobW/HypB/UreG, nucleotide-binding domain LX00_05155 PF03717 Penicillin-binding Protein dimerisation domain LX00_05155 PF00905 Penicillin binding protein transpeptidase domain LX00_05170 PF05191 Adenylate kinase, active site lid LX00_05180 PF10576 Iron-sulfur binding domain of endonuclease III LX00_05180 PF00633 Helix-hairpin-helix motif LX00_05180 PF00730 HhH-GPD superfamily base excision DNA repair protein LX00_05185 PF04060 Putative Fe-S cluster LX00_05190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LX00_05190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LX00_05200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LX00_05205 PF02590 Predicted SPOUT methyltransferase LX00_05210 PF00004 ATPase family associated with various cellular activities (AAA) LX00_05210 PF05362 Lon protease (S16) C-terminal proteolytic domain LX00_05210 PF02190 ATP-dependent protease La (LON) substrate-binding domain LX00_05215 PF13018 Extended Signal Peptide of Type V secretion system LX00_05215 PF05662 Coiled stalk of trimeric autotransporter adhesin LX00_05215 PF05658 Head domain of trimeric autotransporter adhesin LX00_05215 PF03895 YadA-like membrane anchor domain LX00_05225 PF01812 5-formyltetrahydrofolate cyclo-ligase family LX00_05260 PF00557 Metallopeptidase family M24 LX00_05260 PF05195 Aminopeptidase P, N-terminal domain LX00_05265 PF01494 FAD binding domain LX00_05270 PF01494 FAD binding domain LX00_05280 PF13411 MerR HTH family regulatory protein LX00_05290 PF01810 LysE type translocator LX00_05295 PF03466 LysR substrate binding domain LX00_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_05305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LX00_05310 PF02021 Uncharacterised protein family UPF0102 LX00_05315 PF04972 BON domain LX00_05325 PF09297 NADH pyrophosphatase zinc ribbon domain LX00_05325 PF00293 NUDIX domain LX00_05335 PF00929 Exonuclease LX00_05340 PF01464 Transglycosylase SLT domain LX00_05340 PF01476 LysM domain LX00_05340 PF01476 LysM domain LX00_05340 PF01464 Transglycosylase SLT domain LX00_05345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LX00_05350 PF00528 Binding-protein-dependent transport system inner membrane component LX00_05355 PF00528 Binding-protein-dependent transport system inner membrane component LX00_05355 PF12911 N-terminal TM domain of oligopeptide transport permease C LX00_05360 PF00005 ABC transporter LX00_05360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LX00_05365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_05365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LX00_05370 PF07715 TonB-dependent Receptor Plug Domain LX00_05370 PF00593 TonB dependent receptor LX00_05380 PF00929 Exonuclease LX00_05385 PF01979 Amidohydrolase family LX00_05390 PF00563 EAL domain LX00_05390 PF01590 GAF domain LX00_05390 PF00360 Phytochrome region LX00_05390 PF00990 Diguanylate cyclase, GGDEF domain LX00_05395 PF00764 Arginosuccinate synthase LX00_05400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_05400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LX00_05410 PF03180 NLPA lipoprotein LX00_05455 PF16671 Actin cross-linking domain LX00_05455 PF04717 Type VI secretion system, phage-baseplate injector LX00_05460 PF03527 RHS protein LX00_05460 PF05593 RHS Repeat LX00_05500 PF00324 Amino acid permease LX00_05505 PF01266 FAD dependent oxidoreductase LX00_05510 PF00324 Amino acid permease LX00_05525 PF07729 FCD domain LX00_05525 PF00392 Bacterial regulatory proteins, gntR family LX00_05535 PF00171 Aldehyde dehydrogenase family LX00_05545 PF00202 Aminotransferase class-III LX00_05550 PF04958 Arginine N-succinyltransferase beta subunit LX00_05555 PF00324 Amino acid permease LX00_05560 PF00171 Aldehyde dehydrogenase family LX00_05565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LX00_05565 PF12833 Helix-turn-helix domain LX00_05575 PF00892 EamA-like transporter family LX00_05580 PF08666 SAF domain LX00_05580 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LX00_05585 PF07690 Major Facilitator Superfamily LX00_05590 PF13378 Enolase C-terminal domain-like LX00_05595 PF00701 Dihydrodipicolinate synthetase family LX00_05600 PF00171 Aldehyde dehydrogenase family LX00_05605 PF07729 FCD domain LX00_05605 PF00392 Bacterial regulatory proteins, gntR family LX00_05615 PF13610 DDE domain LX00_05625 PF00860 Permease family LX00_05630 PF00962 Adenosine/AMP deaminase LX00_05635 PF01292 Prokaryotic cytochrome b561 LX00_05645 PF01351 Ribonuclease HII LX00_05650 PF02599 Global regulator protein family LX00_05655 PF01842 ACT domain LX00_05655 PF13840 ACT domain LX00_05655 PF00696 Amino acid kinase family LX00_05660 PF02272 DHHA1 domain LX00_05660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LX00_05660 PF01411 tRNA synthetases class II (A) LX00_05665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LX00_05665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LX00_05670 PF13393 Histidyl-tRNA synthetase LX00_05675 PF00709 Adenylosuccinate synthetase LX00_05690 PF00248 Aldo/keto reductase family LX00_05695 PF00027 Cyclic nucleotide-binding domain LX00_05695 PF13545 Crp-like helix-turn-helix domain LX00_05700 PF02566 OsmC-like protein LX00_05715 PF07724 AAA domain (Cdc48 subfamily) LX00_05715 PF17871 AAA lid domain LX00_05715 PF00004 ATPase family associated with various cellular activities (AAA) LX00_05715 PF10431 C-terminal, D2-small domain, of ClpB protein LX00_05715 PF02861 Clp amino terminal domain, pathogenicity island component LX00_05730 PF02926 THUMP domain LX00_05730 PF10672 S-adenosylmethionine-dependent methyltransferase LX00_05730 PF01170 Putative RNA methylase family UPF0020 LX00_05740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LX00_05740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LX00_05745 PF01979 Amidohydrolase family LX00_05750 PF00691 OmpA family LX00_05750 PF13488 Glycine zipper LX00_05760 PF00043 Glutathione S-transferase, C-terminal domain LX00_05760 PF13417 Glutathione S-transferase, N-terminal domain LX00_05765 PF02390 Putative methyltransferase LX00_05775 PF00043 Glutathione S-transferase, C-terminal domain LX00_05775 PF02798 Glutathione S-transferase, N-terminal domain LX00_05785 PF13192 Thioredoxin domain LX00_05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_05805 PF00578 AhpC/TSA family LX00_05805 PF10417 C-terminal domain of 1-Cys peroxiredoxin LX00_05810 PF00271 Helicase conserved C-terminal domain LX00_05810 PF04408 Helicase associated domain (HA2) LX00_05810 PF11898 Domain of unknown function (DUF3418) LX00_05810 PF00270 DEAD/DEAH box helicase LX00_05810 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LX00_05815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LX00_05815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LX00_05825 PF07690 Major Facilitator Superfamily LX00_05830 PF03594 Benzoate membrane transport protein LX00_05835 PF00106 short chain dehydrogenase LX00_05840 PF00175 Oxidoreductase NAD-binding domain LX00_05840 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_05840 PF00970 Oxidoreductase FAD-binding domain LX00_05845 PF00866 Ring hydroxylating beta subunit LX00_05850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LX00_05850 PF00355 Rieske [2Fe-2S] domain LX00_05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_05855 PF03466 LysR substrate binding domain LX00_05865 PF00175 Oxidoreductase NAD-binding domain LX00_05865 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_05865 PF00970 Oxidoreductase FAD-binding domain LX00_05875 PF04945 YHS domain LX00_05875 PF02332 Methane/Phenol/Toluene Hydroxylase LX00_05880 PF02406 MmoB/DmpM family LX00_05885 PF02332 Methane/Phenol/Toluene Hydroxylase LX00_05890 PF06099 Phenol hydroxylase subunit LX00_05895 PF02954 Bacterial regulatory protein, Fis family LX00_05895 PF00158 Sigma-54 interaction domain LX00_05895 PF02830 V4R domain LX00_05895 PF06505 Activator of aromatic catabolism LX00_05905 PF00403 Heavy-metal-associated domain LX00_05910 PF00376 MerR family regulatory protein LX00_05910 PF09278 MerR, DNA binding LX00_05945 PF02601 Exonuclease VII, large subunit LX00_05945 PF13742 OB-fold nucleic acid binding domain LX00_05980 PF01810 LysE type translocator LX00_05985 PF00313 'Cold-shock' DNA-binding domain LX00_05995 PF03807 NADP oxidoreductase coenzyme F420-dependent LX00_05995 PF14748 Pyrroline-5-carboxylate reductase dimerisation LX00_06015 PF07690 Major Facilitator Superfamily LX00_06020 PF01638 HxlR-like helix-turn-helix LX00_06050 PF01406 tRNA synthetases class I (C) catalytic domain LX00_06050 PF09190 DALR domain LX00_06055 PF00571 CBS domain LX00_06055 PF01380 SIS domain LX00_06070 PF03968 OstA-like protein LX00_06075 PF00005 ABC transporter LX00_06075 PF12399 Branched-chain amino acid ATP-binding cassette transporter LX00_06080 PF02321 Outer membrane efflux protein LX00_06085 PF00005 ABC transporter LX00_06085 PF03412 Peptidase C39 family LX00_06085 PF00664 ABC transporter transmembrane region LX00_06095 PF01205 Uncharacterized protein family UPF0029 LX00_06100 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_06110 PF01596 O-methyltransferase LX00_06120 PF00037 4Fe-4S binding domain LX00_06120 PF11953 Domain of unknown function (DUF3470) LX00_06130 PF01624 MutS domain I LX00_06130 PF05192 MutS domain III LX00_06130 PF05190 MutS family domain IV LX00_06130 PF00488 MutS domain V LX00_06130 PF05188 MutS domain II LX00_06145 PF01037 Lrp/AsnC ligand binding domain LX00_06150 PF00892 EamA-like transporter family LX00_06155 PF00563 EAL domain LX00_06155 PF00990 Diguanylate cyclase, GGDEF domain LX00_06155 PF03707 Bacterial signalling protein N terminal repeat LX00_06160 PF03279 Bacterial lipid A biosynthesis acyltransferase LX00_06170 PF07690 Major Facilitator Superfamily LX00_06195 PF02525 Flavodoxin-like fold LX00_06220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_06220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_06240 PF16671 Actin cross-linking domain LX00_06240 PF04717 Type VI secretion system, phage-baseplate injector LX00_06280 PF03466 LysR substrate binding domain LX00_06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_06285 PF01566 Natural resistance-associated macrophage protein LX00_06290 PF03746 LamB/YcsF family LX00_06295 PF07286 Protein of unknown function (DUF1445) LX00_06305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_06305 PF00364 Biotin-requiring enzyme LX00_06305 PF02785 Biotin carboxylase C-terminal domain LX00_06305 PF00289 Biotin carboxylase, N-terminal domain LX00_06310 PF00654 Voltage gated chloride channel LX00_06335 PF00107 Zinc-binding dehydrogenase LX00_06335 PF08240 Alcohol dehydrogenase GroES-like domain LX00_06335 PF13823 Alcohol dehydrogenase GroES-associated LX00_06350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_06350 PF00289 Biotin carboxylase, N-terminal domain LX00_06350 PF02785 Biotin carboxylase C-terminal domain LX00_06355 PF02525 Flavodoxin-like fold LX00_06360 PF01638 HxlR-like helix-turn-helix LX00_06370 PF08753 NikR C terminal nickel binding domain LX00_06370 PF01402 Ribbon-helix-helix protein, copG family LX00_06375 PF01425 Amidase LX00_06380 PF00497 Bacterial extracellular solute-binding proteins, family 3 LX00_06385 PF00005 ABC transporter LX00_06450 PF00691 OmpA family LX00_06450 PF01389 OmpA-like transmembrane domain LX00_06460 PF10431 C-terminal, D2-small domain, of ClpB protein LX00_06460 PF17871 AAA lid domain LX00_06460 PF00004 ATPase family associated with various cellular activities (AAA) LX00_06460 PF07724 AAA domain (Cdc48 subfamily) LX00_06490 PF03466 LysR substrate binding domain LX00_06490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_06500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LX00_06505 PF07690 Major Facilitator Superfamily LX00_06520 PF02677 Epoxyqueuosine reductase QueH LX00_06530 PF09278 MerR, DNA binding LX00_06530 PF00376 MerR family regulatory protein LX00_06545 PF00701 Dihydrodipicolinate synthetase family LX00_06555 PF00392 Bacterial regulatory proteins, gntR family LX00_06560 PF05544 Proline racemase LX00_06565 PF01266 FAD dependent oxidoreductase LX00_06575 PF04324 BFD-like [2Fe-2S] binding domain LX00_06575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_06585 PF00083 Sugar (and other) transporter LX00_06590 PF00171 Aldehyde dehydrogenase family LX00_06595 PF13520 Amino acid permease LX00_06600 PF03313 Serine dehydratase alpha chain LX00_06600 PF03315 Serine dehydratase beta chain LX00_06605 PF01575 MaoC like domain LX00_06605 PF00171 Aldehyde dehydrogenase family LX00_06610 PF05138 Phenylacetic acid catabolic protein LX00_06615 PF06243 Phenylacetic acid degradation B LX00_06620 PF05138 Phenylacetic acid catabolic protein LX00_06625 PF01883 Iron-sulfur cluster assembly protein LX00_06630 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_06630 PF00175 Oxidoreductase NAD-binding domain LX00_06630 PF00970 Oxidoreductase FAD-binding domain LX00_06635 PF00378 Enoyl-CoA hydratase/isomerase LX00_06640 PF00378 Enoyl-CoA hydratase/isomerase LX00_06645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_06645 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LX00_06645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_06650 PF00108 Thiolase, N-terminal domain LX00_06650 PF02803 Thiolase, C-terminal domain LX00_06655 PF00501 AMP-binding enzyme LX00_06655 PF14535 AMP-binding enzyme C-terminal domain LX00_06660 PF08223 PaaX-like protein C-terminal domain LX00_06660 PF07848 PaaX-like protein LX00_06665 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_06670 PF03061 Thioesterase superfamily LX00_06695 PF00199 Catalase LX00_06700 PF01292 Prokaryotic cytochrome b561 LX00_06720 PF12697 Alpha/beta hydrolase family LX00_06725 PF01613 Flavin reductase like domain LX00_06730 PF00296 Luciferase-like monooxygenase LX00_06735 PF00171 Aldehyde dehydrogenase family LX00_06745 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LX00_06755 PF00171 Aldehyde dehydrogenase family LX00_06760 PF02627 Carboxymuconolactone decarboxylase family LX00_06765 PF03466 LysR substrate binding domain LX00_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_06770 PF02525 Flavodoxin-like fold LX00_06775 PF01614 Bacterial transcriptional regulator LX00_06775 PF09339 IclR helix-turn-helix domain LX00_06780 PF01494 FAD binding domain LX00_06785 PF00392 Bacterial regulatory proteins, gntR family LX00_06785 PF07702 UTRA domain LX00_06795 PF08402 TOBE domain LX00_06795 PF00005 ABC transporter LX00_06800 PF00528 Binding-protein-dependent transport system inner membrane component LX00_06805 PF01266 FAD dependent oxidoreductase LX00_06810 PF00266 Aminotransferase class-V LX00_06815 PF13419 Haloacid dehalogenase-like hydrolase LX00_06820 PF07690 Major Facilitator Superfamily LX00_06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_06825 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_06830 PF02515 CoA-transferase family III LX00_06835 PF09339 IclR helix-turn-helix domain LX00_06840 PF00378 Enoyl-CoA hydratase/isomerase LX00_06845 PF03060 Nitronate monooxygenase LX00_06855 PF16861 Carbamoyltransferase C-terminus LX00_06855 PF02543 Carbamoyltransferase N-terminus LX00_06860 PF01810 LysE type translocator LX00_06870 PF09339 IclR helix-turn-helix domain LX00_06875 PF02803 Thiolase, C-terminal domain LX00_06875 PF00108 Thiolase, N-terminal domain LX00_06880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_06880 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LX00_06880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_06890 PF00378 Enoyl-CoA hydratase/isomerase LX00_06895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_06895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_06895 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_06900 PF07690 Major Facilitator Superfamily LX00_06905 PF01144 Coenzyme A transferase LX00_06910 PF01144 Coenzyme A transferase LX00_06920 PF07690 Major Facilitator Superfamily LX00_06930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_06930 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_06930 PF12806 Acetyl-CoA dehydrogenase C-terminal like LX00_06930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_06945 PF03466 LysR substrate binding domain LX00_06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_06950 PF00682 HMGL-like LX00_06955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_06955 PF02785 Biotin carboxylase C-terminal domain LX00_06955 PF00364 Biotin-requiring enzyme LX00_06955 PF00289 Biotin carboxylase, N-terminal domain LX00_06960 PF00378 Enoyl-CoA hydratase/isomerase LX00_06965 PF01039 Carboxyl transferase domain LX00_06970 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_06970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_06970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_06975 PF00440 Bacterial regulatory proteins, tetR family LX00_06980 PF00501 AMP-binding enzyme LX00_06980 PF13193 AMP-binding enzyme C-terminal domain LX00_07000 PF03466 LysR substrate binding domain LX00_07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07035 PF02464 Competence-damaged protein LX00_07035 PF18146 Damage-inducible protein CinA KH domain LX00_07035 PF00994 Probable molybdopterin binding domain LX00_07045 PF00199 Catalase LX00_07045 PF06628 Catalase-related immune-responsive LX00_07045 PF18011 C-terminal domain found in long catalases LX00_07070 PF00717 Peptidase S24-like LX00_07080 PF13404 AsnC-type helix-turn-helix domain LX00_07080 PF01037 Lrp/AsnC ligand binding domain LX00_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_07090 PF00512 His Kinase A (phospho-acceptor) domain LX00_07090 PF09308 LuxQ, periplasmic LX00_07090 PF00072 Response regulator receiver domain LX00_07095 PF00072 Response regulator receiver domain LX00_07105 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07110 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07115 PF00005 ABC transporter LX00_07120 PF00497 Bacterial extracellular solute-binding proteins, family 3 LX00_07125 PF00497 Bacterial extracellular solute-binding proteins, family 3 LX00_07130 PF03466 LysR substrate binding domain LX00_07130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07135 PF01810 LysE type translocator LX00_07140 PF00266 Aminotransferase class-V LX00_07150 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_07155 PF00581 Rhodanese-like domain LX00_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07165 PF03466 LysR substrate binding domain LX00_07170 PF02798 Glutathione S-transferase, N-terminal domain LX00_07175 PF14834 Glutathione S-transferase, C-terminal domain LX00_07175 PF02798 Glutathione S-transferase, N-terminal domain LX00_07180 PF03466 LysR substrate binding domain LX00_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07185 PF03788 LrgA family LX00_07190 PF04172 LrgB-like family LX00_07195 PF00155 Aminotransferase class I and II LX00_07195 PF00392 Bacterial regulatory proteins, gntR family LX00_07210 PF07690 Major Facilitator Superfamily LX00_07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07220 PF03466 LysR substrate binding domain LX00_07225 PF16957 Malonate decarboxylase, alpha subunit, transporter LX00_07230 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LX00_07235 PF06857 Malonate decarboxylase delta subunit (MdcD) LX00_07240 PF01039 Carboxyl transferase domain LX00_07250 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LX00_07255 PF00698 Acyl transferase domain LX00_07270 PF03466 LysR substrate binding domain LX00_07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07275 PF00155 Aminotransferase class I and II LX00_07275 PF00392 Bacterial regulatory proteins, gntR family LX00_07285 PF02322 Cytochrome bd terminal oxidase subunit II LX00_07290 PF01654 Cytochrome bd terminal oxidase subunit I LX00_07305 PF00296 Luciferase-like monooxygenase LX00_07310 PF00083 Sugar (and other) transporter LX00_07320 PF13359 DDE superfamily endonuclease LX00_07320 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_07330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LX00_07340 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LX00_07350 PF01177 Asp/Glu/Hydantoin racemase LX00_07355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LX00_07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07365 PF03466 LysR substrate binding domain LX00_07375 PF01979 Amidohydrolase family LX00_07375 PF13382 Adenine deaminase C-terminal domain LX00_07385 PF03960 ArsC family LX00_07390 PF01022 Bacterial regulatory protein, arsR family LX00_07395 PF01758 Sodium Bile acid symporter family LX00_07400 PF03466 LysR substrate binding domain LX00_07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07415 PF13192 Thioredoxin domain LX00_07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_07430 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_07435 PF00588 SpoU rRNA Methylase family LX00_07440 PF02811 PHP domain LX00_07440 PF01336 OB-fold nucleic acid binding domain LX00_07440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LX00_07440 PF07733 Bacterial DNA polymerase III alpha NTPase domain LX00_07440 PF14579 Helix-hairpin-helix motif LX00_07445 PF17763 Glutaminase/Asparaginase C-terminal domain LX00_07445 PF00710 Asparaginase, N-terminal LX00_07450 PF00375 Sodium:dicarboxylate symporter family LX00_07455 PF00155 Aminotransferase class I and II LX00_07460 PF01641 SelR domain LX00_07465 PF00255 Glutathione peroxidase LX00_07470 PF12852 Cupin LX00_07470 PF12833 Helix-turn-helix domain LX00_07480 PF00155 Aminotransferase class I and II LX00_07485 PF08335 GlnD PII-uridylyltransferase LX00_07485 PF01909 Nucleotidyltransferase domain LX00_07485 PF01966 HD domain LX00_07490 PF02222 ATP-grasp domain LX00_07500 PF05437 Branched-chain amino acid transport protein (AzlD) LX00_07505 PF03591 AzlC protein LX00_07530 PF06071 Protein of unknown function (DUF933) LX00_07530 PF01926 50S ribosome-binding GTPase LX00_07535 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07540 PF00005 ABC transporter LX00_07540 PF09383 NIL domain LX00_07545 PF03180 NLPA lipoprotein LX00_07550 PF03180 NLPA lipoprotein LX00_07555 PF00296 Luciferase-like monooxygenase LX00_07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_07565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LX00_07580 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07585 PF00528 Binding-protein-dependent transport system inner membrane component LX00_07590 PF00005 ABC transporter LX00_07600 PF01037 Lrp/AsnC ligand binding domain LX00_07605 PF01709 Transcriptional regulator LX00_07615 PF00440 Bacterial regulatory proteins, tetR family LX00_07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_07640 PF03466 LysR substrate binding domain LX00_07650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LX00_07660 PF00892 EamA-like transporter family LX00_07680 PF13953 PapC C-terminal domain LX00_07680 PF00577 Outer membrane usher protein LX00_07680 PF13954 PapC N-terminal domain LX00_07685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LX00_07685 PF02753 Pili assembly chaperone PapD, C-terminal domain LX00_07690 PF16970 Type-1 fimbrial protein, A LX00_07705 PF04055 Radical SAM superfamily LX00_07705 PF06968 Biotin and Thiamin Synthesis associated domain LX00_07710 PF08331 Domain of unknown function (DUF1730) LX00_07715 PF03853 YjeF-related protein N-terminus LX00_07715 PF01256 Carbohydrate kinase LX00_07720 PF02075 Crossover junction endodeoxyribonuclease RuvC LX00_07735 PF00905 Penicillin binding protein transpeptidase domain LX00_07765 PF02773 S-adenosylmethionine synthetase, C-terminal domain LX00_07765 PF00438 S-adenosylmethionine synthetase, N-terminal domain LX00_07765 PF02772 S-adenosylmethionine synthetase, central domain LX00_07770 PF02779 Transketolase, pyrimidine binding domain LX00_07770 PF00456 Transketolase, thiamine diphosphate binding domain LX00_07770 PF02780 Transketolase, C-terminal domain LX00_07780 PF04264 YceI-like domain LX00_07790 PF09992 Phosphodiester glycosidase LX00_07800 PF05958 tRNA (Uracil-5-)-methyltransferase LX00_07805 PF04229 GrpB protein LX00_07810 PF00171 Aldehyde dehydrogenase family LX00_07810 PF01619 Proline dehydrogenase LX00_07810 PF14850 DNA-binding domain of Proline dehydrogenase LX00_07810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LX00_07820 PF01037 Lrp/AsnC ligand binding domain LX00_07825 PF00474 Sodium:solute symporter family LX00_07830 PF02146 Sir2 family LX00_07835 PF01597 Glycine cleavage H-protein LX00_07840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LX00_07840 PF12833 Helix-turn-helix domain LX00_07850 PF00664 ABC transporter transmembrane region LX00_07850 PF00005 ABC transporter LX00_07855 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LX00_07860 PF06912 Protein of unknown function (DUF1275) LX00_07865 PF00375 Sodium:dicarboxylate symporter family LX00_07880 PF08007 Cupin superfamily protein LX00_07885 PF02545 Maf-like protein LX00_07895 PF00162 Phosphoglycerate kinase LX00_07905 PF01116 Fructose-bisphosphate aldolase class-II LX00_07910 PF09312 SurA N-terminal domain LX00_07910 PF00639 PPIC-type PPIASE domain LX00_07915 PF04453 LPS transport system D LX00_07915 PF03968 OstA-like protein LX00_07920 PF01636 Phosphotransferase enzyme family LX00_07925 PF00483 Nucleotidyl transferase LX00_07930 PF02527 rRNA small subunit methyltransferase G LX00_07935 PF13614 AAA domain LX00_07940 PF17762 HTH domain found in ParB protein LX00_07940 PF02195 ParB-like nuclease domain LX00_07945 PF01618 MotA/TolQ/ExbB proton channel family LX00_07955 PF00005 ABC transporter LX00_07955 PF00664 ABC transporter transmembrane region LX00_07960 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LX00_07965 PF02348 Cytidylyltransferase LX00_07970 PF09115 DNA polymerase III, delta subunit, C terminal LX00_07980 PF01026 TatD related DNase LX00_07995 PF07963 Prokaryotic N-terminal methylation motif LX00_07995 PF02501 Type II secretion system (T2SS), protein I LX00_08000 PF11612 Type II secretion system (T2SS), protein J LX00_08000 PF07963 Prokaryotic N-terminal methylation motif LX00_08005 PF03934 Type II secretion system (T2SS), protein K LX00_08015 PF03167 Uracil DNA glycosylase superfamily LX00_08025 PF14437 MafB19-like deaminase LX00_08035 PF02224 Cytidylate kinase LX00_08040 PF00575 S1 RNA binding domain LX00_08045 PF00216 Bacterial DNA-binding protein LX00_08055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LX00_08065 PF00743 Flavin-binding monooxygenase-like LX00_08075 PF03969 AFG1-like ATPase LX00_08080 PF01274 Malate synthase LX00_08090 PF02472 Biopolymer transport protein ExbD/TolR LX00_08095 PF02472 Biopolymer transport protein ExbD/TolR LX00_08100 PF01618 MotA/TolQ/ExbB proton channel family LX00_08110 PF00593 TonB dependent receptor LX00_08110 PF07715 TonB-dependent Receptor Plug Domain LX00_08130 PF01432 Peptidase family M3 LX00_08135 PF00528 Binding-protein-dependent transport system inner membrane component LX00_08140 PF00528 Binding-protein-dependent transport system inner membrane component LX00_08145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LX00_08145 PF00005 ABC transporter LX00_08160 PF00459 Inositol monophosphatase family LX00_08170 PF01649 Ribosomal protein S20 LX00_08175 PF13460 NAD(P)H-binding LX00_08180 PF03737 Aldolase/RraA LX00_08200 PF03461 TRCF domain LX00_08200 PF00271 Helicase conserved C-terminal domain LX00_08200 PF17757 UvrB interaction domain LX00_08200 PF02559 CarD-like/TRCF domain LX00_08200 PF00270 DEAD/DEAH box helicase LX00_08210 PF00211 Adenylate and Guanylate cyclase catalytic domain LX00_08215 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_08220 PF00012 Hsp70 protein LX00_08225 PF07743 HSCB C-terminal oligomerisation domain LX00_08225 PF00226 DnaJ domain LX00_08230 PF01521 Iron-sulphur cluster biosynthesis LX00_08235 PF01592 NifU-like N terminal domain LX00_08240 PF00266 Aminotransferase class-V LX00_08245 PF02082 Transcriptional regulator LX00_08260 PF00216 Bacterial DNA-binding protein LX00_08265 PF00639 PPIC-type PPIASE domain LX00_08265 PF09312 SurA N-terminal domain LX00_08270 PF12852 Cupin LX00_08270 PF12833 Helix-turn-helix domain LX00_08275 PF00487 Fatty acid desaturase LX00_08280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_08280 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_08280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_08285 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_08285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_08285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_08290 PF03109 ABC1 family LX00_08300 PF04073 Aminoacyl-tRNA editing domain LX00_08305 PF06276 Ferric iron reductase FhuF-like transporter LX00_08305 PF04183 IucA / IucC family LX00_08310 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LX00_08315 PF07690 Major Facilitator Superfamily LX00_08320 PF06276 Ferric iron reductase FhuF-like transporter LX00_08320 PF04183 IucA / IucC family LX00_08325 PF06276 Ferric iron reductase FhuF-like transporter LX00_08325 PF04183 IucA / IucC family LX00_08335 PF03737 Aldolase/RraA LX00_08340 PF07715 TonB-dependent Receptor Plug Domain LX00_08340 PF00593 TonB dependent receptor LX00_08365 PF13419 Haloacid dehalogenase-like hydrolase LX00_08380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LX00_08385 PF02277 Phosphoribosyltransferase LX00_08390 PF00300 Histidine phosphatase superfamily (branch 1) LX00_08400 PF02654 Cobalamin-5-phosphate synthase LX00_08405 PF00793 DAHP synthetase I family LX00_08410 PF01925 Sulfite exporter TauE/SafE LX00_08435 PF02684 Lipid-A-disaccharide synthetase LX00_08445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_08450 PF00005 ABC transporter LX00_08485 PF01230 HIT domain LX00_08515 PF08241 Methyltransferase domain LX00_08520 PF00561 alpha/beta hydrolase fold LX00_08525 PF01053 Cys/Met metabolism PLP-dependent enzyme LX00_08535 PF02575 YbaB/EbfC DNA-binding family LX00_08540 PF02132 RecR protein LX00_08540 PF13662 Toprim domain LX00_08545 PF01612 3'-5' exonuclease LX00_08545 PF00570 HRDC domain LX00_08575 PF05166 YcgL domain LX00_08585 PF01434 Peptidase family M41 LX00_08585 PF17862 AAA+ lid domain LX00_08585 PF00004 ATPase family associated with various cellular activities (AAA) LX00_08595 PF00291 Pyridoxal-phosphate dependent enzyme LX00_08600 PF05175 Methyltransferase small domain LX00_08605 PF01264 Chorismate synthase LX00_08610 PF08448 PAS fold LX00_08610 PF00990 Diguanylate cyclase, GGDEF domain LX00_08625 PF04055 Radical SAM superfamily LX00_08630 PF00676 Dehydrogenase E1 component LX00_08635 PF02779 Transketolase, pyrimidine binding domain LX00_08635 PF02780 Transketolase, C-terminal domain LX00_08640 PF00364 Biotin-requiring enzyme LX00_08640 PF02817 e3 binding domain LX00_08640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LX00_08645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_08645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LX00_08650 PF00106 short chain dehydrogenase LX00_08655 PF00107 Zinc-binding dehydrogenase LX00_08655 PF08240 Alcohol dehydrogenase GroES-like domain LX00_08660 PF01062 Bestrophin, RFP-TM, chloride channel LX00_08665 PF00158 Sigma-54 interaction domain LX00_08665 PF02954 Bacterial regulatory protein, Fis family LX00_08665 PF00072 Response regulator receiver domain LX00_08670 PF04273 Putative phosphatase (DUF442) LX00_08670 PF00753 Metallo-beta-lactamase superfamily LX00_08675 PF04273 Putative phosphatase (DUF442) LX00_08675 PF00753 Metallo-beta-lactamase superfamily LX00_08680 PF01925 Sulfite exporter TauE/SafE LX00_08695 PF12833 Helix-turn-helix domain LX00_08695 PF06445 GyrI-like small molecule binding domain LX00_08700 PF01638 HxlR-like helix-turn-helix LX00_08705 PF02525 Flavodoxin-like fold LX00_08730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LX00_08735 PF00528 Binding-protein-dependent transport system inner membrane component LX00_08740 PF00005 ABC transporter LX00_08755 PF00083 Sugar (and other) transporter LX00_08760 PF07715 TonB-dependent Receptor Plug Domain LX00_08760 PF00593 TonB dependent receptor LX00_08765 PF00206 Lyase LX00_08765 PF10415 Fumarase C C-terminus LX00_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_08780 PF03466 LysR substrate binding domain LX00_08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_08785 PF03466 LysR substrate binding domain LX00_08790 PF00108 Thiolase, N-terminal domain LX00_08790 PF02803 Thiolase, C-terminal domain LX00_08795 PF02667 Short chain fatty acid transporter LX00_08800 PF01144 Coenzyme A transferase LX00_08805 PF01144 Coenzyme A transferase LX00_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_08810 PF03466 LysR substrate binding domain LX00_08830 PF00440 Bacterial regulatory proteins, tetR family LX00_08850 PF12833 Helix-turn-helix domain LX00_08850 PF06719 AraC-type transcriptional regulator N-terminus LX00_08855 PF07690 Major Facilitator Superfamily LX00_08860 PF01738 Dienelactone hydrolase family LX00_08875 PF01613 Flavin reductase like domain LX00_08885 PF14525 AraC-binding-like domain LX00_08885 PF12833 Helix-turn-helix domain LX00_08890 PF00175 Oxidoreductase NAD-binding domain LX00_08890 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_08890 PF00970 Oxidoreductase FAD-binding domain LX00_08895 PF00866 Ring hydroxylating beta subunit LX00_08900 PF00355 Rieske [2Fe-2S] domain LX00_08900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LX00_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_08905 PF03459 TOBE domain LX00_08915 PF00528 Binding-protein-dependent transport system inner membrane component LX00_08920 PF03459 TOBE domain LX00_08920 PF00005 ABC transporter LX00_08925 PF00106 short chain dehydrogenase LX00_08930 PF00550 Phosphopantetheine attachment site LX00_08930 PF00857 Isochorismatase family LX00_08940 PF00149 Calcineurin-like phosphoesterase LX00_08945 PF02384 N-6 DNA Methylase LX00_08955 PF01420 Type I restriction modification DNA specificity domain LX00_08970 PF02503 Polyphosphate kinase middle domain LX00_08970 PF13090 Polyphosphate kinase C-terminal domain 2 LX00_08970 PF13089 Polyphosphate kinase N-terminal domain LX00_08970 PF17941 Polyphosphate kinase C-terminal domain 1 LX00_08975 PF12706 Beta-lactamase superfamily domain LX00_08980 PF03070 TENA/THI-4/PQQC family LX00_08985 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LX00_08990 PF13186 Iron-sulfur cluster-binding domain LX00_08990 PF04055 Radical SAM superfamily LX00_08995 PF01244 Membrane dipeptidase (Peptidase family M19) LX00_09015 PF13091 PLD-like domain LX00_09030 PF00199 Catalase LX00_09040 PF08240 Alcohol dehydrogenase GroES-like domain LX00_09040 PF00107 Zinc-binding dehydrogenase LX00_09055 PF13953 PapC C-terminal domain LX00_09055 PF13954 PapC N-terminal domain LX00_09055 PF00577 Outer membrane usher protein LX00_09060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LX00_09060 PF02753 Pili assembly chaperone PapD, C-terminal domain LX00_09065 PF16970 Type-1 fimbrial protein, A LX00_09220 PF00248 Aldo/keto reductase family LX00_09225 PF00293 NUDIX domain LX00_09230 PF00933 Glycosyl hydrolase family 3 N terminal domain LX00_09245 PF00356 Bacterial regulatory proteins, lacI family LX00_09255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LX00_09255 PF00205 Thiamine pyrophosphate enzyme, central domain LX00_09255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LX00_09265 PF02264 LamB porin LX00_09270 PF05690 Thiazole biosynthesis protein ThiG LX00_09280 PF00459 Inositol monophosphatase family LX00_09285 PF07690 Major Facilitator Superfamily LX00_09290 PF05199 GMC oxidoreductase LX00_09290 PF00732 GMC oxidoreductase LX00_09295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LX00_09295 PF00205 Thiamine pyrophosphate enzyme, central domain LX00_09295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LX00_09310 PF04172 LrgB-like family LX00_09315 PF00356 Bacterial regulatory proteins, lacI family LX00_09320 PF01738 Dienelactone hydrolase family LX00_09325 PF00892 EamA-like transporter family LX00_09330 PF05199 GMC oxidoreductase LX00_09330 PF00732 GMC oxidoreductase LX00_09335 PF07690 Major Facilitator Superfamily LX00_09350 PF02264 LamB porin LX00_09365 PF01958 Domain of unknown function DUF108 LX00_09365 PF03447 Homoserine dehydrogenase, NAD binding domain LX00_09370 PF00561 alpha/beta hydrolase fold LX00_09380 PF05199 GMC oxidoreductase LX00_09380 PF00732 GMC oxidoreductase LX00_09385 PF05544 Proline racemase LX00_09405 PF01266 FAD dependent oxidoreductase LX00_09420 PF01593 Flavin containing amine oxidoreductase LX00_09425 PF00743 Flavin-binding monooxygenase-like LX00_09430 PF12146 Serine aminopeptidase, S33 LX00_09440 PF00873 AcrB/AcrD/AcrF family LX00_09445 PF00529 HlyD membrane-fusion protein of T1SS LX00_09445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_09450 PF00072 Response regulator receiver domain LX00_09450 PF00486 Transcriptional regulatory protein, C terminal LX00_09455 PF16527 Two-component sensor protein CpxA, periplasmic domain LX00_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_09455 PF00672 HAMP domain LX00_09455 PF00512 His Kinase A (phospho-acceptor) domain LX00_09465 PF12833 Helix-turn-helix domain LX00_09465 PF02311 AraC-like ligand binding domain LX00_09470 PF12146 Serine aminopeptidase, S33 LX00_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_09480 PF03466 LysR substrate binding domain LX00_09485 PF12146 Serine aminopeptidase, S33 LX00_09540 PF04607 Region found in RelA / SpoT proteins LX00_09540 PF13291 ACT domain LX00_09540 PF02824 TGS domain LX00_09550 PF01975 Survival protein SurE LX00_09575 PF07690 Major Facilitator Superfamily LX00_09580 PF13533 Biotin-lipoyl like LX00_09600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LX00_09605 PF14572 Phosphoribosyl synthetase-associated domain LX00_09605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LX00_09625 PF00005 ABC transporter LX00_09640 PF00107 Zinc-binding dehydrogenase LX00_09640 PF08240 Alcohol dehydrogenase GroES-like domain LX00_09650 PF12833 Helix-turn-helix domain LX00_09650 PF06719 AraC-type transcriptional regulator N-terminus LX00_09655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LX00_09655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LX00_09660 PF07690 Major Facilitator Superfamily LX00_09665 PF01370 NAD dependent epimerase/dehydratase family LX00_09670 PF03466 LysR substrate binding domain LX00_09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_09680 PF00920 Dehydratase family LX00_09685 PF00171 Aldehyde dehydrogenase family LX00_09690 PF01047 MarR family LX00_09695 PF01613 Flavin reductase like domain LX00_09700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LX00_09710 PF00083 Sugar (and other) transporter LX00_09710 PF07690 Major Facilitator Superfamily LX00_09715 PF00171 Aldehyde dehydrogenase family LX00_09720 PF03328 HpcH/HpaI aldolase/citrate lyase family LX00_09725 PF01557 Fumarylacetoacetate (FAA) hydrolase family LX00_09730 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LX00_09735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LX00_09740 PF00171 Aldehyde dehydrogenase family LX00_09745 PF01557 Fumarylacetoacetate (FAA) hydrolase family LX00_09750 PF01557 Fumarylacetoacetate (FAA) hydrolase family LX00_09760 PF07690 Major Facilitator Superfamily LX00_09765 PF00579 tRNA synthetases class I (W and Y) LX00_09800 PF00199 Catalase LX00_09800 PF06628 Catalase-related immune-responsive LX00_09805 PF00561 alpha/beta hydrolase fold LX00_09815 PF00171 Aldehyde dehydrogenase family LX00_09820 PF00107 Zinc-binding dehydrogenase LX00_09820 PF08240 Alcohol dehydrogenase GroES-like domain LX00_09825 PF00474 Sodium:solute symporter family LX00_09830 PF04341 Protein of unknown function, DUF485 LX00_09835 PF13193 AMP-binding enzyme C-terminal domain LX00_09835 PF00501 AMP-binding enzyme LX00_09840 PF06506 Propionate catabolism activator LX00_09840 PF02954 Bacterial regulatory protein, Fis family LX00_09840 PF00158 Sigma-54 interaction domain LX00_09850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_09850 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_09850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_09865 PF01636 Phosphotransferase enzyme family LX00_09870 PF00171 Aldehyde dehydrogenase family LX00_09880 PF07690 Major Facilitator Superfamily LX00_09885 PF00920 Dehydratase family LX00_09890 PF00392 Bacterial regulatory proteins, gntR family LX00_09890 PF07729 FCD domain LX00_09900 PF03466 LysR substrate binding domain LX00_09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_09905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LX00_09905 PF13378 Enolase C-terminal domain-like LX00_09910 PF02426 Muconolactone delta-isomerase LX00_09915 PF00775 Dioxygenase LX00_09915 PF04444 Catechol dioxygenase N terminus LX00_09920 PF01144 Coenzyme A transferase LX00_09925 PF01144 Coenzyme A transferase LX00_09930 PF00108 Thiolase, N-terminal domain LX00_09930 PF02803 Thiolase, C-terminal domain LX00_09935 PF12146 Serine aminopeptidase, S33 LX00_09940 PF00171 Aldehyde dehydrogenase family LX00_09950 PF02728 Copper amine oxidase, N3 domain LX00_09950 PF02727 Copper amine oxidase, N2 domain LX00_09950 PF07833 Copper amine oxidase N-terminal domain LX00_09950 PF01179 Copper amine oxidase, enzyme domain LX00_09955 PF12833 Helix-turn-helix domain LX00_09955 PF02311 AraC-like ligand binding domain LX00_09960 PF01613 Flavin reductase like domain LX00_09965 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_09965 PF00175 Oxidoreductase NAD-binding domain LX00_09980 PF00355 Rieske [2Fe-2S] domain LX00_09980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LX00_09995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LX00_10000 PF01425 Amidase LX00_10015 PF07690 Major Facilitator Superfamily LX00_10025 PF00106 short chain dehydrogenase LX00_10040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_10040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_10040 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_10045 PF03466 LysR substrate binding domain LX00_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_10050 PF01614 Bacterial transcriptional regulator LX00_10050 PF09339 IclR helix-turn-helix domain LX00_10055 PF00753 Metallo-beta-lactamase superfamily LX00_10065 PF04143 Sulphur transport LX00_10075 PF13360 PQQ-like domain LX00_10075 PF01011 PQQ enzyme repeat LX00_10080 PF04966 Carbohydrate-selective porin, OprB family LX00_10085 PF05048 Periplasmic copper-binding protein (NosD) LX00_10090 PF01487 Type I 3-dehydroquinase LX00_10095 PF00775 Dioxygenase LX00_10100 PF00775 Dioxygenase LX00_10100 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LX00_10105 PF02627 Carboxymuconolactone decarboxylase family LX00_10110 PF07690 Major Facilitator Superfamily LX00_10115 PF00561 alpha/beta hydrolase fold LX00_10120 PF10397 Adenylosuccinate lyase C-terminus LX00_10120 PF00206 Lyase LX00_10125 PF02803 Thiolase, C-terminal domain LX00_10125 PF00108 Thiolase, N-terminal domain LX00_10130 PF01144 Coenzyme A transferase LX00_10135 PF01144 Coenzyme A transferase LX00_10140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LX00_10145 PF04977 Septum formation initiator LX00_10150 PF04239 Protein of unknown function (DUF421) LX00_10155 PF00113 Enolase, C-terminal TIM barrel domain LX00_10155 PF03952 Enolase, N-terminal domain LX00_10160 PF00793 DAHP synthetase I family LX00_10165 PF06418 CTP synthase N-terminus LX00_10165 PF00117 Glutamine amidotransferase class-I LX00_10195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LX00_10195 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_10210 PF00793 DAHP synthetase I family LX00_10215 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LX00_10220 PF17871 AAA lid domain LX00_10220 PF07724 AAA domain (Cdc48 subfamily) LX00_10220 PF10431 C-terminal, D2-small domain, of ClpB protein LX00_10220 PF00004 ATPase family associated with various cellular activities (AAA) LX00_10220 PF02861 Clp amino terminal domain, pathogenicity island component LX00_10225 PF02617 ATP-dependent Clp protease adaptor protein ClpS LX00_10235 PF01118 Semialdehyde dehydrogenase, NAD binding domain LX00_10235 PF02774 Semialdehyde dehydrogenase, dimerisation domain LX00_10250 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LX00_10255 PF00585 C-terminal regulatory domain of Threonine dehydratase LX00_10255 PF00291 Pyridoxal-phosphate dependent enzyme LX00_10260 PF02080 TrkA-C domain LX00_10260 PF02254 TrkA-N domain LX00_10265 PF02386 Cation transport protein LX00_10270 PF02253 Phospholipase A1 LX00_10275 PF05193 Peptidase M16 inactive domain LX00_10275 PF00675 Insulinase (Peptidase family M16) LX00_10275 PF08367 Peptidase M16C associated LX00_10280 PF00593 TonB dependent receptor LX00_10280 PF07715 TonB-dependent Receptor Plug Domain LX00_10285 PF00294 pfkB family carbohydrate kinase LX00_10295 PF07290 Protein of unknown function (DUF1449) LX00_10300 PF13359 DDE superfamily endonuclease LX00_10300 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_10305 PF13359 DDE superfamily endonuclease LX00_10305 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_10315 PF01654 Cytochrome bd terminal oxidase subunit I LX00_10320 PF02322 Cytochrome bd terminal oxidase subunit II LX00_10325 PF08173 Membrane bound YbgT-like protein LX00_10340 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LX00_10350 PF02881 SRP54-type protein, helical bundle domain LX00_10350 PF00448 SRP54-type protein, GTPase domain LX00_10375 PF00571 CBS domain LX00_10375 PF00478 IMP dehydrogenase / GMP reductase domain LX00_10380 PF00202 Aminotransferase class-III LX00_10385 PF00462 Glutaredoxin LX00_10395 PF03466 LysR substrate binding domain LX00_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_10400 PF00557 Metallopeptidase family M24 LX00_10405 PF05525 Branched-chain amino acid transport protein LX00_10430 PF00391 PEP-utilising enzyme, mobile domain LX00_10430 PF05524 PEP-utilising enzyme, N-terminal LX00_10430 PF02896 PEP-utilising enzyme, TIM barrel domain LX00_10430 PF00381 PTS HPr component phosphorylation site LX00_10430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LX00_10435 PF00294 pfkB family carbohydrate kinase LX00_10440 PF02378 Phosphotransferase system, EIIC LX00_10440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LX00_10505 PF00216 Bacterial DNA-binding protein LX00_10555 PF11985 Protein of unknown function (DUF3486) LX00_10560 PF03237 Terminase-like family LX00_10575 PF02086 D12 class N6 adenine-specific DNA methyltransferase LX00_10580 PF06074 Protein of unknown function (DUF935) LX00_10585 PF04233 Phage Mu protein F like protein LX00_10685 PF04865 Baseplate J-like protein LX00_10720 PF13359 DDE superfamily endonuclease LX00_10720 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_10735 PF07995 Glucose / Sorbosone dehydrogenase LX00_10740 PF02586 SOS response associated peptidase (SRAP) LX00_10745 PF00916 Sulfate permease family LX00_10745 PF01740 STAS domain LX00_10750 PF05922 Peptidase inhibitor I9 LX00_10750 PF00082 Subtilase family LX00_10760 PF00324 Amino acid permease LX00_10765 PF00266 Aminotransferase class-V LX00_10770 PF01037 Lrp/AsnC ligand binding domain LX00_10795 PF13419 Haloacid dehalogenase-like hydrolase LX00_10800 PF01479 S4 domain LX00_10805 PF00154 recA bacterial DNA recombination protein LX00_10810 PF02631 RecX family LX00_10820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LX00_10820 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_10825 PF07977 FabA-like domain LX00_10830 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_10830 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LX00_10840 PF07244 Surface antigen variable number repeat LX00_10840 PF01103 Surface antigen LX00_10845 PF02163 Peptidase family M50 LX00_10845 PF17820 PDZ domain LX00_10845 PF13180 PDZ domain LX00_10850 PF13288 DXP reductoisomerase C-terminal domain LX00_10850 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LX00_10850 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LX00_10860 PF01255 Putative undecaprenyl diphosphate synthase LX00_10865 PF01765 Ribosome recycling factor LX00_10870 PF00696 Amino acid kinase family LX00_10875 PF00919 Uncharacterized protein family UPF0004 LX00_10875 PF18693 TRAM domain LX00_10875 PF04055 Radical SAM superfamily LX00_10880 PF00512 His Kinase A (phospho-acceptor) domain LX00_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_10880 PF00989 PAS fold LX00_10885 PF00158 Sigma-54 interaction domain LX00_10885 PF02954 Bacterial regulatory protein, Fis family LX00_10885 PF00072 Response regulator receiver domain LX00_10890 PF00440 Bacterial regulatory proteins, tetR family LX00_10895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LX00_10895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LX00_10905 PF02542 YgbB family LX00_10915 PF01266 FAD dependent oxidoreductase LX00_10935 PF00206 Lyase LX00_10935 PF10415 Fumarase C C-terminus LX00_10940 PF16363 GDP-mannose 4,6 dehydratase LX00_10945 PF02635 DsrE/DsrF-like family LX00_10965 PF00892 EamA-like transporter family LX00_10970 PF00392 Bacterial regulatory proteins, gntR family LX00_10970 PF00155 Aminotransferase class I and II LX00_10975 PF01638 HxlR-like helix-turn-helix LX00_10980 PF00994 Probable molybdopterin binding domain LX00_10980 PF03453 MoeA N-terminal region (domain I and II) LX00_10980 PF03454 MoeA C-terminal region (domain IV) LX00_10985 PF00994 Probable molybdopterin binding domain LX00_10985 PF01967 MoaC family LX00_10990 PF02391 MoaE protein LX00_11000 PF06463 Molybdenum Cofactor Synthesis C LX00_11000 PF04055 Radical SAM superfamily LX00_11005 PF00384 Molybdopterin oxidoreductase LX00_11005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LX00_11005 PF01568 Molydopterin dinucleotide binding domain LX00_11010 PF12804 MobA-like NTP transferase domain LX00_11015 PF01568 Molydopterin dinucleotide binding domain LX00_11015 PF04324 BFD-like [2Fe-2S] binding domain LX00_11015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LX00_11015 PF00384 Molybdopterin oxidoreductase LX00_11020 PF18267 Rubredoxin NAD+ reductase C-terminal domain LX00_11020 PF04324 BFD-like [2Fe-2S] binding domain LX00_11020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LX00_11020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LX00_11020 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_11025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LX00_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_11025 PF13806 Rieske-like [2Fe-2S] domain LX00_11025 PF18267 Rubredoxin NAD+ reductase C-terminal domain LX00_11025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LX00_11025 PF04324 BFD-like [2Fe-2S] binding domain LX00_11035 PF00486 Transcriptional regulatory protein, C terminal LX00_11035 PF00072 Response regulator receiver domain LX00_11040 PF00005 ABC transporter LX00_11045 PF13438 Domain of unknown function (DUF4113) LX00_11045 PF00817 impB/mucB/samB family LX00_11045 PF11799 impB/mucB/samB family C-terminal domain LX00_11050 PF01220 Dehydroquinase class II LX00_11055 PF00364 Biotin-requiring enzyme LX00_11060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_11060 PF00289 Biotin carboxylase, N-terminal domain LX00_11060 PF02785 Biotin carboxylase C-terminal domain LX00_11070 PF12832 MFS_1 like family LX00_11090 PF01645 Conserved region in glutamate synthase LX00_11105 PF01565 FAD binding domain LX00_11105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LX00_11110 PF01451 Low molecular weight phosphotyrosine protein phosphatase LX00_11120 PF00465 Iron-containing alcohol dehydrogenase LX00_11125 PF03061 Thioesterase superfamily LX00_11130 PF05506 Domain of unknown function (DUF756) LX00_11130 PF04185 Phosphoesterase family LX00_11140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LX00_11140 PF12170 DNA polymerase III tau subunit V interacting with alpha LX00_11140 PF12169 DNA polymerase III subunits gamma and tau domain III LX00_11145 PF07690 Major Facilitator Superfamily LX00_11155 PF00144 Beta-lactamase LX00_11170 PF02803 Thiolase, C-terminal domain LX00_11170 PF00108 Thiolase, N-terminal domain LX00_11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_11180 PF03466 LysR substrate binding domain LX00_11190 PF01810 LysE type translocator LX00_11195 PF01037 Lrp/AsnC ligand binding domain LX00_11200 PF03594 Benzoate membrane transport protein LX00_11205 PF02308 MgtC family LX00_11210 PF00689 Cation transporting ATPase, C-terminus LX00_11210 PF00690 Cation transporter/ATPase, N-terminus LX00_11230 PF00582 Universal stress protein family LX00_11240 PF13936 Helix-turn-helix domain LX00_11240 PF00665 Integrase core domain LX00_11265 PF07715 TonB-dependent Receptor Plug Domain LX00_11265 PF00593 TonB dependent receptor LX00_11295 PF00924 Mechanosensitive ion channel LX00_11300 PF00593 TonB dependent receptor LX00_11300 PF07715 TonB-dependent Receptor Plug Domain LX00_11305 PF00440 Bacterial regulatory proteins, tetR family LX00_11315 PF01037 Lrp/AsnC ligand binding domain LX00_11320 PF01817 Chorismate mutase type II LX00_11340 PF01433 Peptidase family M1 domain LX00_11340 PF11940 Domain of unknown function (DUF3458) Ig-like fold LX00_11340 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LX00_11355 PF02110 Hydroxyethylthiazole kinase family LX00_11365 PF05970 PIF1-like helicase LX00_11365 PF14493 Helix-turn-helix domain LX00_11370 PF00465 Iron-containing alcohol dehydrogenase LX00_11385 PF00171 Aldehyde dehydrogenase family LX00_11390 PF13520 Amino acid permease LX00_11395 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LX00_11400 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LX00_11405 PF00958 GMP synthase C terminal domain LX00_11405 PF00117 Glutamine amidotransferase class-I LX00_11405 PF02540 NAD synthase LX00_11410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LX00_11410 PF00749 tRNA synthetases class I (E and Q), catalytic domain LX00_11415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LX00_11420 PF00149 Calcineurin-like phosphoesterase LX00_11430 PF00881 Nitroreductase family LX00_11440 PF17209 Hfq protein LX00_11450 PF01119 DNA mismatch repair protein, C-terminal domain LX00_11450 PF08676 MutL C terminal dimerisation domain LX00_11455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LX00_11460 PF01479 S4 domain LX00_11460 PF00849 RNA pseudouridylate synthase LX00_11475 PF00849 RNA pseudouridylate synthase LX00_11475 PF01479 S4 domain LX00_11485 PF04284 Protein of unknown function (DUF441) LX00_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_11490 PF03466 LysR substrate binding domain LX00_11505 PF07690 Major Facilitator Superfamily LX00_11510 PF00520 Ion transport protein LX00_11510 PF00027 Cyclic nucleotide-binding domain LX00_11520 PF11791 Aconitate B N-terminal domain LX00_11520 PF00330 Aconitase family (aconitate hydratase) LX00_11520 PF06434 Aconitate hydratase 2 N-terminus LX00_11535 PF17243 POTRA domain TamA domain 1 LX00_11535 PF01103 Surface antigen LX00_11535 PF07244 Surface antigen variable number repeat LX00_11540 PF07690 Major Facilitator Superfamily LX00_11545 PF03232 Ubiquinone biosynthesis protein COQ7 LX00_11555 PF00120 Glutamine synthetase, catalytic domain LX00_11560 PF00072 Response regulator receiver domain LX00_11560 PF00486 Transcriptional regulatory protein, C terminal LX00_11565 PF00512 His Kinase A (phospho-acceptor) domain LX00_11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_11565 PF13493 Domain of unknown function (DUF4118) LX00_11565 PF02702 Osmosensitive K+ channel His kinase sensor domain LX00_11570 PF02669 K+-transporting ATPase, c chain LX00_11580 PF03814 Potassium-transporting ATPase A subunit LX00_11595 PF03109 ABC1 family LX00_11600 PF00899 ThiF family LX00_11605 PF01613 Flavin reductase like domain LX00_11610 PF13193 AMP-binding enzyme C-terminal domain LX00_11610 PF00501 AMP-binding enzyme LX00_11615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_11615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_11615 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_11620 PF00106 short chain dehydrogenase LX00_11625 PF12833 Helix-turn-helix domain LX00_11630 PF17827 PrmC N-terminal domain LX00_11630 PF13847 Methyltransferase domain LX00_11635 PF00472 RF-1 domain LX00_11635 PF03462 PCRF domain LX00_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_11645 PF03466 LysR substrate binding domain LX00_11660 PF00296 Luciferase-like monooxygenase LX00_11670 PF13994 PgaD-like protein LX00_11675 PF00535 Glycosyl transferase family 2 LX00_11680 PF01522 Polysaccharide deacetylase LX00_11680 PF14883 Hypothetical glycosyl hydrolase family 13 LX00_11690 PF03618 Kinase/pyrophosphorylase LX00_11695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LX00_11695 PF02896 PEP-utilising enzyme, TIM barrel domain LX00_11695 PF00391 PEP-utilising enzyme, mobile domain LX00_11705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LX00_11705 PF06481 COX Aromatic Rich Motif LX00_11710 PF00115 Cytochrome C and Quinol oxidase polypeptide I LX00_11715 PF00510 Cytochrome c oxidase subunit III LX00_11720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LX00_11725 PF01040 UbiA prenyltransferase family LX00_11730 PF01250 Ribosomal protein S6 LX00_11735 PF01084 Ribosomal protein S18 LX00_11740 PF03948 Ribosomal protein L9, C-terminal domain LX00_11740 PF01281 Ribosomal protein L9, N-terminal domain LX00_11745 PF03796 DnaB-like helicase C terminal domain LX00_11745 PF00772 DnaB-like helicase N terminal domain LX00_11750 PF01168 Alanine racemase, N-terminal domain LX00_11750 PF00842 Alanine racemase, C-terminal domain LX00_11760 PF01841 Transglutaminase-like superfamily LX00_11760 PF08379 Bacterial transglutaminase-like N-terminal region LX00_11770 PF14403 Circularly permuted ATP-grasp type 2 LX00_11785 PF13932 GidA associated domain LX00_11785 PF01134 Glucose inhibited division protein A LX00_11805 PF02954 Bacterial regulatory protein, Fis family LX00_11810 PF02142 MGS-like domain LX00_11810 PF01808 AICARFT/IMPCHase bienzyme LX00_11815 PF02844 Phosphoribosylglycinamide synthetase, N domain LX00_11815 PF02843 Phosphoribosylglycinamide synthetase, C domain LX00_11815 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LX00_11820 PF03180 NLPA lipoprotein LX00_11825 PF00005 ABC transporter LX00_11825 PF09383 NIL domain LX00_11830 PF00528 Binding-protein-dependent transport system inner membrane component LX00_11835 PF16123 Hydroxyacylglutathione hydrolase C-terminus LX00_11835 PF00753 Metallo-beta-lactamase superfamily LX00_11845 PF00375 Sodium:dicarboxylate symporter family LX00_11865 PF07995 Glucose / Sorbosone dehydrogenase LX00_11870 PF00892 EamA-like transporter family LX00_11875 PF01177 Asp/Glu/Hydantoin racemase LX00_11885 PF02470 MlaD protein LX00_11890 PF04403 Paraquat-inducible protein A LX00_11900 PF02080 TrkA-C domain LX00_11900 PF06826 Predicted Permease Membrane Region LX00_11905 PF00155 Aminotransferase class I and II LX00_11925 PF00083 Sugar (and other) transporter LX00_11925 PF08946 Osmosensory transporter coiled coil LX00_11975 PF07729 FCD domain LX00_11975 PF00392 Bacterial regulatory proteins, gntR family LX00_11985 PF03616 Sodium/glutamate symporter LX00_11990 PF00561 alpha/beta hydrolase fold LX00_12015 PF04076 Bacterial OB fold (BOF) protein LX00_12045 PF00324 Amino acid permease LX00_12050 PF00171 Aldehyde dehydrogenase family LX00_12055 PF00202 Aminotransferase class-III LX00_12060 PF03466 LysR substrate binding domain LX00_12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_12100 PF13332 Hemagglutinin repeat LX00_12100 PF13018 Extended Signal Peptide of Type V secretion system LX00_12100 PF05860 haemagglutination activity domain LX00_12100 PF04829 Pre-toxin domain with VENN motif LX00_12100 PF13018 Extended Signal Peptide of Type V secretion system LX00_12100 PF05860 haemagglutination activity domain LX00_12100 PF04829 Pre-toxin domain with VENN motif LX00_12100 PF13332 Hemagglutinin repeat LX00_12105 PF08479 POTRA domain, ShlB-type LX00_12105 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LX00_12105 PF17287 POTRA domain LX00_12140 PF00069 Protein kinase domain LX00_12160 PF00814 Glycoprotease family LX00_12165 PF01165 Ribosomal protein S21 LX00_12170 PF09424 Yqey-like protein LX00_12175 PF01435 Peptidase family M48 LX00_12180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LX00_12180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LX00_12195 PF00156 Phosphoribosyl transferase domain LX00_12200 PF02674 Colicin V production protein LX00_12205 PF01180 Dihydroorotate dehydrogenase LX00_12225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LX00_12225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LX00_12230 PF00881 Nitroreductase family LX00_12240 PF00270 DEAD/DEAH box helicase LX00_12240 PF00271 Helicase conserved C-terminal domain LX00_12245 PF00313 'Cold-shock' DNA-binding domain LX00_12255 PF04545 Sigma-70, region 4 LX00_12255 PF04542 Sigma-70 region 2 LX00_12255 PF00140 Sigma-70 factor, region 1.2 LX00_12260 PF04241 Protein of unknown function (DUF423) LX00_12270 PF05690 Thiazole biosynthesis protein ThiG LX00_12280 PF03883 Peroxide stress protein YaaA LX00_12290 PF00753 Metallo-beta-lactamase superfamily LX00_12295 PF07687 Peptidase dimerisation domain LX00_12295 PF01546 Peptidase family M20/M25/M40 LX00_12305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LX00_12310 PF01817 Chorismate mutase type II LX00_12310 PF00800 Prephenate dehydratase LX00_12310 PF01842 ACT domain LX00_12315 PF00756 Putative esterase LX00_12320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_12320 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_12320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_12325 PF00375 Sodium:dicarboxylate symporter family LX00_12330 PF02885 Glycosyl transferase family, helical bundle domain LX00_12330 PF00591 Glycosyl transferase family, a/b domain LX00_12335 PF07023 Protein of unknown function (DUF1315) LX00_12340 PF01513 ATP-NAD kinase LX00_12345 PF00905 Penicillin binding protein transpeptidase domain LX00_12345 PF00912 Transglycosylase LX00_12345 PF14814 Bifunctional transglycosylase second domain LX00_12355 PF00293 NUDIX domain LX00_12365 PF00512 His Kinase A (phospho-acceptor) domain LX00_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_12365 PF08521 Two-component sensor kinase N-terminal LX00_12370 PF00072 Response regulator receiver domain LX00_12370 PF00486 Transcriptional regulatory protein, C terminal LX00_12380 PF00437 Type II/IV secretion system protein LX00_12390 PF01980 tRNA-methyltransferase O LX00_12390 PF18389 TrmO C-terminal domain LX00_12395 PF00175 Oxidoreductase NAD-binding domain LX00_12395 PF00970 Oxidoreductase FAD-binding domain LX00_12400 PF02567 Phenazine biosynthesis-like protein LX00_12405 PF00155 Aminotransferase class I and II LX00_12405 PF00392 Bacterial regulatory proteins, gntR family LX00_12415 PF00037 4Fe-4S binding domain LX00_12420 PF00893 Small Multidrug Resistance protein LX00_12425 PF00005 ABC transporter LX00_12430 PF00528 Binding-protein-dependent transport system inner membrane component LX00_12435 PF00528 Binding-protein-dependent transport system inner membrane component LX00_12440 PF00497 Bacterial extracellular solute-binding proteins, family 3 LX00_12455 PF13533 Biotin-lipoyl like LX00_12460 PF00873 AcrB/AcrD/AcrF family LX00_12465 PF02321 Outer membrane efflux protein LX00_12470 PF00464 Serine hydroxymethyltransferase LX00_12495 PF00005 ABC transporter LX00_12500 PF01061 ABC-2 type transporter LX00_12505 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LX00_12505 PF14489 QueF-like protein LX00_12515 PF01098 Cell cycle protein LX00_12520 PF13406 Transglycosylase SLT domain LX00_12525 PF03330 Lytic transglycolase LX00_12525 PF05036 Sporulation related domain LX00_12545 PF12833 Helix-turn-helix domain LX00_12555 PF00889 Elongation factor TS LX00_12560 PF00318 Ribosomal protein S2 LX00_12565 PF00557 Metallopeptidase family M24 LX00_12575 PF07690 Major Facilitator Superfamily LX00_12590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LX00_12590 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_12595 PF04055 Radical SAM superfamily LX00_12600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_12600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_12600 PF09317 Domain of unknown function (DUF1974) LX00_12615 PF05221 S-adenosyl-L-homocysteine hydrolase LX00_12615 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LX00_12620 PF02219 Methylenetetrahydrofolate reductase LX00_12625 PF04452 RNA methyltransferase LX00_12630 PF00563 EAL domain LX00_12630 PF00990 Diguanylate cyclase, GGDEF domain LX00_12630 PF03707 Bacterial signalling protein N terminal repeat LX00_12635 PF01515 Phosphate acetyl/butaryl transferase LX00_12635 PF00390 Malic enzyme, N-terminal domain LX00_12635 PF03949 Malic enzyme, NAD binding domain LX00_12640 PF01743 Poly A polymerase head domain LX00_12640 PF12627 Probable RNA and SrmB- binding site of polymerase A LX00_12645 PF13180 PDZ domain LX00_12650 PF01784 NIF3 (NGG1p interacting factor 3) LX00_12655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LX00_12655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LX00_12685 PF01040 UbiA prenyltransferase family LX00_12690 PF04345 Chorismate lyase LX00_12700 PF00854 POT family LX00_12710 PF13356 Arm DNA-binding domain LX00_12710 PF00589 Phage integrase family LX00_12820 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) LX00_12840 PF06381 Protein of unknown function (DUF1073) LX00_12990 PF00117 Glutamine amidotransferase class-I LX00_12995 PF11838 ERAP1-like C-terminal domain LX00_12995 PF01433 Peptidase family M1 domain LX00_13000 PF00593 TonB dependent receptor LX00_13000 PF07715 TonB-dependent Receptor Plug Domain LX00_13005 PF02885 Glycosyl transferase family, helical bundle domain LX00_13005 PF00591 Glycosyl transferase family, a/b domain LX00_13010 PF00218 Indole-3-glycerol phosphate synthase LX00_13025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LX00_13025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LX00_13030 PF01799 [2Fe-2S] binding domain LX00_13030 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_13050 PF00144 Beta-lactamase LX00_13065 PF05675 Protein of unknown function (DUF817) LX00_13070 PF01208 Uroporphyrinogen decarboxylase (URO-D) LX00_13080 PF00425 chorismate binding enzyme LX00_13090 PF00975 Thioesterase domain LX00_13095 PF00664 ABC transporter transmembrane region LX00_13095 PF00005 ABC transporter LX00_13100 PF00664 ABC transporter transmembrane region LX00_13100 PF00005 ABC transporter LX00_13110 PF00282 Pyridoxal-dependent decarboxylase conserved domain LX00_13115 PF00857 Isochorismatase family LX00_13115 PF00550 Phosphopantetheine attachment site LX00_13120 PF13193 AMP-binding enzyme C-terminal domain LX00_13120 PF00501 AMP-binding enzyme LX00_13125 PF00550 Phosphopantetheine attachment site LX00_13125 PF00668 Condensation domain LX00_13125 PF00501 AMP-binding enzyme LX00_13130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LX00_13135 PF00593 TonB dependent receptor LX00_13135 PF07715 TonB-dependent Receptor Plug Domain LX00_13140 PF01497 Periplasmic binding protein LX00_13145 PF00005 ABC transporter LX00_13150 PF01032 FecCD transport family LX00_13155 PF01032 FecCD transport family LX00_13160 PF13193 AMP-binding enzyme C-terminal domain LX00_13160 PF00501 AMP-binding enzyme LX00_13160 PF00668 Condensation domain LX00_13160 PF00975 Thioesterase domain LX00_13160 PF00550 Phosphopantetheine attachment site LX00_13165 PF00668 Condensation domain LX00_13165 PF00550 Phosphopantetheine attachment site LX00_13165 PF13193 AMP-binding enzyme C-terminal domain LX00_13165 PF00501 AMP-binding enzyme LX00_13175 PF08348 YheO-like PAS domain LX00_13175 PF13309 HTH domain LX00_13180 PF00291 Pyridoxal-phosphate dependent enzyme LX00_13185 PF02678 Pirin LX00_13185 PF17954 Quercetinase C-terminal cupin domain LX00_13205 PF13359 DDE superfamily endonuclease LX00_13205 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_13210 PF13613 Helix-turn-helix of DDE superfamily endonuclease LX00_13210 PF13359 DDE superfamily endonuclease LX00_13225 PF04328 Selenoprotein, putative LX00_13230 PF02554 Carbon starvation protein CstA LX00_13230 PF13722 5TM C-terminal transporter carbon starvation CstA LX00_13235 PF01132 Elongation factor P (EF-P) OB domain LX00_13235 PF09285 Elongation factor P, C-terminal LX00_13235 PF08207 Elongation factor P (EF-P) KOW-like domain LX00_13240 PF04055 Radical SAM superfamily LX00_13250 PF00563 EAL domain LX00_13250 PF12792 CSS motif domain associated with EAL LX00_13255 PF01197 Ribosomal protein L31 LX00_13260 PF13593 SBF-like CPA transporter family (DUF4137) LX00_13265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LX00_13270 PF07690 Major Facilitator Superfamily LX00_13275 PF05362 Lon protease (S16) C-terminal proteolytic domain LX00_13275 PF13654 AAA domain LX00_13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_13280 PF03466 LysR substrate binding domain LX00_13285 PF01476 LysM domain LX00_13285 PF01551 Peptidase family M23 LX00_13290 PF01975 Survival protein SurE LX00_13305 PF07943 Penicillin-binding protein 5, C-terminal domain LX00_13305 PF00768 D-alanyl-D-alanine carboxypeptidase LX00_13310 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_13315 PF00293 NUDIX domain LX00_13315 PF13344 Haloacid dehalogenase-like hydrolase LX00_13325 PF04356 Protein of unknown function (DUF489) LX00_13330 PF00206 Lyase LX00_13330 PF08328 Adenylosuccinate lyase C-terminal LX00_13345 PF08496 Peptidase family S49 N-terminal LX00_13345 PF01343 Peptidase family S49 LX00_13350 PF00005 ABC transporter LX00_13355 PF00528 Binding-protein-dependent transport system inner membrane component LX00_13360 PF00528 Binding-protein-dependent transport system inner membrane component LX00_13365 PF12849 PBP superfamily domain LX00_13370 PF00324 Amino acid permease LX00_13375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LX00_13375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LX00_13375 PF00205 Thiamine pyrophosphate enzyme, central domain LX00_13380 PF01037 Lrp/AsnC ligand binding domain LX00_13385 PF00171 Aldehyde dehydrogenase family LX00_13390 PF00282 Pyridoxal-dependent decarboxylase conserved domain LX00_13395 PF00202 Aminotransferase class-III LX00_13405 PF00440 Bacterial regulatory proteins, tetR family LX00_13405 PF17754 MftR C-terminal domain LX00_13415 PF00487 Fatty acid desaturase LX00_13420 PF00111 2Fe-2S iron-sulfur cluster binding domain LX00_13420 PF00970 Oxidoreductase FAD-binding domain LX00_13420 PF00175 Oxidoreductase NAD-binding domain LX00_13425 PF00440 Bacterial regulatory proteins, tetR family LX00_13435 PF00271 Helicase conserved C-terminal domain LX00_13435 PF12137 RNA polymerase recycling family C-terminal LX00_13435 PF00176 SNF2 family N-terminal domain LX00_13435 PF18339 RapA N-terminal Tudor like domain 1 LX00_13435 PF18337 RapA N-terminal Tudor like domain LX00_13440 PF00849 RNA pseudouridylate synthase LX00_13450 PF00202 Aminotransferase class-III LX00_13455 PF02581 Thiamine monophosphate synthase LX00_13480 PF05193 Peptidase M16 inactive domain LX00_13480 PF00675 Insulinase (Peptidase family M16) LX00_13485 PF02567 Phenazine biosynthesis-like protein LX00_13495 PF03466 LysR substrate binding domain LX00_13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_13500 PF06779 Uncharacterised MFS-type transporter YbfB LX00_13515 PF00180 Isocitrate/isopropylmalate dehydrogenase LX00_13520 PF00849 RNA pseudouridylate synthase LX00_13525 PF03971 Monomeric isocitrate dehydrogenase LX00_13535 PF00768 D-alanyl-D-alanine carboxypeptidase LX00_13535 PF07943 Penicillin-binding protein 5, C-terminal domain LX00_13540 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_13545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LX00_13550 PF00875 DNA photolyase LX00_13550 PF03441 FAD binding domain of DNA photolyase LX00_13580 PF02350 UDP-N-acetylglucosamine 2-epimerase LX00_13595 PF03060 Nitronate monooxygenase LX00_13600 PF01207 Dihydrouridine synthase (Dus) LX00_13605 PF07759 Protein of unknown function (DUF1615) LX00_13615 PF00696 Amino acid kinase family LX00_13615 PF01472 PUA domain LX00_13620 PF01018 GTP1/OBG LX00_13620 PF01926 50S ribosome-binding GTPase LX00_13635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LX00_13635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LX00_13640 PF00892 EamA-like transporter family LX00_13650 PF17757 UvrB interaction domain LX00_13650 PF12344 Ultra-violet resistance protein B LX00_13650 PF02151 UvrB/uvrC motif LX00_13650 PF00271 Helicase conserved C-terminal domain LX00_13650 PF04851 Type III restriction enzyme, res subunit LX00_13660 PF00990 Diguanylate cyclase, GGDEF domain LX00_13660 PF17151 Periplasmic sensor domain LX00_13695 PF00106 short chain dehydrogenase LX00_13700 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LX00_13705 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LX00_13710 PF11967 Recombination protein O N terminal LX00_13710 PF02565 Recombination protein O C terminal LX00_13720 PF07650 KH domain LX00_13720 PF01926 50S ribosome-binding GTPase LX00_13725 PF14622 Ribonuclease-III-like LX00_13725 PF00035 Double-stranded RNA binding motif LX00_13735 PF10502 Signal peptidase, peptidase S26 LX00_13740 PF06421 GTP-binding protein LepA C-terminus LX00_13740 PF00009 Elongation factor Tu GTP binding domain LX00_13740 PF03144 Elongation factor Tu domain 2 LX00_13740 PF00679 Elongation factor G C-terminus LX00_13750 PF13180 PDZ domain LX00_13755 PF02910 Fumarate reductase flavoprotein C-term LX00_13755 PF00890 FAD binding domain LX00_13765 PF02223 Thymidylate kinase LX00_13770 PF02618 YceG-like family LX00_13775 PF01063 Amino-transferase class IV LX00_13790 PF00528 Binding-protein-dependent transport system inner membrane component LX00_13795 PF00528 Binding-protein-dependent transport system inner membrane component LX00_13800 PF12857 TOBE-like domain LX00_13800 PF00005 ABC transporter LX00_13805 PF03466 LysR substrate binding domain LX00_13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_13815 PF14602 Hexapeptide repeat of succinyl-transferase LX00_13815 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LX00_13815 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_13825 PF06508 Queuosine biosynthesis protein QueC LX00_13840 PF00578 AhpC/TSA family LX00_13850 PF00293 NUDIX domain LX00_13850 PF01467 Cytidylyltransferase-like LX00_13855 PF00378 Enoyl-CoA hydratase/isomerase LX00_13860 PF01784 NIF3 (NGG1p interacting factor 3) LX00_13870 PF07690 Major Facilitator Superfamily LX00_13875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LX00_13875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LX00_13875 PF02769 AIR synthase related protein, C-terminal domain LX00_13880 PF01966 HD domain LX00_13885 PF07499 RuvA, C-terminal domain LX00_13885 PF01330 RuvA N terminal domain LX00_13890 PF05496 Holliday junction DNA helicase RuvB P-loop domain LX00_13890 PF05491 RuvB C-terminal winged helix domain LX00_13890 PF17864 RuvB AAA lid domain LX00_13895 PF07687 Peptidase dimerisation domain LX00_13895 PF01546 Peptidase family M20/M25/M40 LX00_13900 PF03061 Thioesterase superfamily LX00_13905 PF01618 MotA/TolQ/ExbB proton channel family LX00_13910 PF02472 Biopolymer transport protein ExbD/TolR LX00_13920 PF04052 TolB amino-terminal domain LX00_13920 PF07676 WD40-like Beta Propeller Repeat LX00_13925 PF00691 OmpA family LX00_13935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LX00_13940 PF00588 SpoU rRNA Methylase family LX00_13940 PF08032 RNA 2'-O ribose methyltransferase substrate binding LX00_13970 PF11638 DnaA N-terminal domain LX00_13970 PF08299 Bacterial dnaA protein helix-turn-helix LX00_13970 PF00308 Bacterial dnaA protein LX00_13975 PF01594 AI-2E family transporter LX00_13980 PF02769 AIR synthase related protein, C-terminal domain LX00_13980 PF00586 AIR synthase related protein, N-terminal domain LX00_13985 PF00551 Formyl transferase LX00_13990 PF12697 Alpha/beta hydrolase family LX00_13995 PF01343 Peptidase family S49 LX00_13995 PF06965 Na+/H+ antiporter 1 LX00_14005 PF13567 Domain of unknown function (DUF4131) LX00_14005 PF03772 Competence protein LX00_14005 PF00753 Metallo-beta-lactamase superfamily LX00_14010 PF00005 ABC transporter LX00_14015 PF12704 MacB-like periplasmic core domain LX00_14015 PF02687 FtsX-like permease family LX00_14025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LX00_14040 PF00266 Aminotransferase class-V LX00_14050 PF13533 Biotin-lipoyl like LX00_14070 PF00535 Glycosyl transferase family 2 LX00_14085 PF00521 DNA gyrase/topoisomerase IV, subunit A LX00_14085 PF03989 DNA gyrase C-terminal domain, beta-propeller LX00_14090 PF01012 Electron transfer flavoprotein domain LX00_14090 PF00766 Electron transfer flavoprotein FAD-binding domain LX00_14095 PF01012 Electron transfer flavoprotein domain LX00_14100 PF00589 Phage integrase family LX00_14100 PF02899 Phage integrase, N-terminal SAM-like domain LX00_14105 PF01810 LysE type translocator LX00_14110 PF01678 Diaminopimelate epimerase LX00_14115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LX00_14115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LX00_14125 PF00324 Amino acid permease LX00_14130 PF18073 Rubredoxin metal binding domain LX00_14140 PF00152 tRNA synthetases class II (D, K and N) LX00_14145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LX00_14145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LX00_14145 PF11890 Domain of unknown function (DUF3410) LX00_14150 PF06803 Protein of unknown function (DUF1232) LX00_14155 PF02634 FdhD/NarQ family LX00_14160 PF00384 Molybdopterin oxidoreductase LX00_14165 PF02595 Glycerate kinase family LX00_14180 PF00881 Nitroreductase family LX00_14230 PF09857 Putative toxin of bacterial toxin-antitoxin pair LX00_14240 PF00975 Thioesterase domain LX00_14240 PF00501 AMP-binding enzyme LX00_14240 PF13193 AMP-binding enzyme C-terminal domain LX00_14240 PF00668 Condensation domain LX00_14240 PF00550 Phosphopantetheine attachment site LX00_14255 PF01272 Transcription elongation factor, GreA/GreB, C-term LX00_14255 PF03449 Transcription elongation factor, N-terminal LX00_14260 PF01464 Transglycosylase SLT domain LX00_14260 PF00497 Bacterial extracellular solute-binding proteins, family 3 LX00_14270 PF01171 PP-loop family LX00_14275 PF01464 Transglycosylase SLT domain LX00_14280 PF01435 Peptidase family M48 LX00_14290 PF00873 AcrB/AcrD/AcrF family LX00_14295 PF03009 Glycerophosphoryl diester phosphodiesterase family LX00_14305 PF01219 Prokaryotic diacylglycerol kinase LX00_14310 PF00118 TCP-1/cpn60 chaperonin family LX00_14315 PF00166 Chaperonin 10 Kd subunit LX00_14325 PF00149 Calcineurin-like phosphoesterase LX00_14330 PF00781 Diacylglycerol kinase catalytic domain LX00_14335 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LX00_14335 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LX00_14340 PF01266 FAD dependent oxidoreductase LX00_14340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LX00_14345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LX00_14345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LX00_14350 PF00083 Sugar (and other) transporter LX00_14365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LX00_14365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LX00_14385 PF16655 PhoD-like phosphatase, N-terminal domain LX00_14385 PF09423 PhoD-like phosphatase LX00_14405 PF00809 Pterin binding enzyme LX00_14410 PF01434 Peptidase family M41 LX00_14410 PF06480 FtsH Extracellular LX00_14410 PF17862 AAA+ lid domain LX00_14410 PF00004 ATPase family associated with various cellular activities (AAA) LX00_14415 PF01728 FtsJ-like methyltransferase LX00_14435 PF00117 Glutamine amidotransferase class-I LX00_14435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LX00_14440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LX00_14440 PF02142 MGS-like domain LX00_14440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_14445 PF03449 Transcription elongation factor, N-terminal LX00_14445 PF01272 Transcription elongation factor, GreA/GreB, C-term LX00_14450 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_14455 PF00582 Universal stress protein family LX00_14460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LX00_14470 PF09587 Bacterial capsule synthesis protein PGA_cap LX00_14485 PF00999 Sodium/hydrogen exchanger family LX00_14490 PF04228 Putative neutral zinc metallopeptidase LX00_14495 PF05661 Protein of unknown function (DUF808) LX00_14500 PF00579 tRNA synthetases class I (W and Y) LX00_14505 PF02629 CoA binding domain LX00_14505 PF00549 CoA-ligase LX00_14510 PF00549 CoA-ligase LX00_14510 PF08442 ATP-grasp domain LX00_14515 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_14515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LX00_14520 PF00364 Biotin-requiring enzyme LX00_14520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LX00_14520 PF02817 e3 binding domain LX00_14525 PF16078 2-oxoglutarate dehydrogenase N-terminus LX00_14525 PF02779 Transketolase, pyrimidine binding domain LX00_14525 PF16870 2-oxoglutarate dehydrogenase C-terminal LX00_14525 PF00676 Dehydrogenase E1 component LX00_14530 PF13085 2Fe-2S iron-sulfur cluster binding domain LX00_14535 PF02910 Fumarate reductase flavoprotein C-term LX00_14535 PF00890 FAD binding domain LX00_14540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LX00_14545 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LX00_14550 PF00285 Citrate synthase, C-terminal domain LX00_14580 PF03979 Sigma-70 factor, region 1.1 LX00_14580 PF04546 Sigma-70, non-essential region LX00_14580 PF00140 Sigma-70 factor, region 1.2 LX00_14580 PF04542 Sigma-70 region 2 LX00_14580 PF04539 Sigma-70 region 3 LX00_14580 PF04545 Sigma-70, region 4 LX00_14585 PF04359 Protein of unknown function (DUF493) LX00_14590 PF03099 Biotin/lipoate A/B protein ligase family LX00_14600 PF00465 Iron-containing alcohol dehydrogenase LX00_14605 PF13520 Amino acid permease LX00_14610 PF03358 NADPH-dependent FMN reductase LX00_14615 PF01638 HxlR-like helix-turn-helix LX00_14620 PF00588 SpoU rRNA Methylase family LX00_14625 PF14824 Sirohaem biosynthesis protein central LX00_14625 PF10414 Sirohaem synthase dimerisation region LX00_14625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LX00_14630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LX00_14630 PF02403 Seryl-tRNA synthetase N-terminal domain LX00_14640 PF03548 Outer membrane lipoprotein carrier protein LolA LX00_14645 PF01016 Ribosomal L27 protein LX00_14650 PF00829 Ribosomal prokaryotic L21 protein LX00_14660 PF00348 Polyprenyl synthetase LX00_14665 PF09190 DALR domain LX00_14665 PF01406 tRNA synthetases class I (C) catalytic domain LX00_14670 PF01569 PAP2 superfamily LX00_14675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_14675 PF00529 HlyD membrane-fusion protein of T1SS LX00_14680 PF00873 AcrB/AcrD/AcrF family LX00_14685 PF02321 Outer membrane efflux protein LX00_14690 PF01906 Putative heavy-metal-binding LX00_14695 PF01906 Putative heavy-metal-binding LX00_14715 PF10458 Valyl tRNA synthetase tRNA binding arm LX00_14715 PF00133 tRNA synthetases class I (I, L, M and V) LX00_14715 PF08264 Anticodon-binding domain of tRNA LX00_14735 PF03466 LysR substrate binding domain LX00_14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_14740 PF00909 Ammonium Transporter Family LX00_14750 PF00512 His Kinase A (phospho-acceptor) domain LX00_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_14750 PF08521 Two-component sensor kinase N-terminal LX00_14755 PF00072 Response regulator receiver domain LX00_14755 PF00486 Transcriptional regulatory protein, C terminal LX00_14760 PF00884 Sulfatase LX00_14760 PF08019 Phosphoethanolamine transferase EptA/EptB LX00_14785 PF01734 Patatin-like phospholipase LX00_14955 PF03592 Terminase small subunit LX00_15065 PF00772 DnaB-like helicase N terminal domain LX00_15065 PF03796 DnaB-like helicase C terminal domain LX00_15095 PF01381 Helix-turn-helix LX00_15120 PF01965 DJ-1/PfpI family LX00_15125 PF00698 Acyl transferase domain LX00_15125 PF08240 Alcohol dehydrogenase GroES-like domain LX00_15125 PF08990 Erythronolide synthase docking LX00_15125 PF09277 Erythronolide synthase, docking LX00_15125 PF00109 Beta-ketoacyl synthase, N-terminal domain LX00_15125 PF16197 Ketoacyl-synthetase C-terminal extension LX00_15125 PF08659 KR domain LX00_15125 PF02801 Beta-ketoacyl synthase, C-terminal domain LX00_15125 PF00550 Phosphopantetheine attachment site LX00_15125 PF14765 Polyketide synthase dehydratase LX00_15130 PF06719 AraC-type transcriptional regulator N-terminus LX00_15130 PF12833 Helix-turn-helix domain LX00_15135 PF02673 Bacitracin resistance protein BacA LX00_15160 PF02525 Flavodoxin-like fold LX00_15175 PF01507 Phosphoadenosine phosphosulfate reductase family LX00_15180 PF06974 Protein of unknown function (DUF1298) LX00_15180 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LX00_15190 PF00575 S1 RNA binding domain LX00_15190 PF10150 Ribonuclease E/G family LX00_15195 PF02545 Maf-like protein LX00_15200 PF04093 rod shape-determining protein MreD LX00_15205 PF04085 rod shape-determining protein MreC LX00_15215 PF02686 Glu-tRNAGln amidotransferase C subunit LX00_15220 PF01425 Amidase LX00_15225 PF02934 GatB/GatE catalytic domain LX00_15225 PF02637 GatB domain LX00_15250 PF01431 Peptidase family M13 LX00_15250 PF05649 Peptidase family M13 LX00_15255 PF05992 SbmA/BacA-like family LX00_15260 PF00291 Pyridoxal-phosphate dependent enzyme LX00_15260 PF13291 ACT domain LX00_15265 PF01734 Patatin-like phospholipase LX00_15270 PF01235 Sodium:alanine symporter family LX00_15285 PF00881 Nitroreductase family LX00_15290 PF07690 Major Facilitator Superfamily LX00_15295 PF12805 FUSC-like inner membrane protein yccS LX00_15305 PF00175 Oxidoreductase NAD-binding domain LX00_15305 PF00258 Flavodoxin LX00_15305 PF00667 FAD binding domain LX00_15345 PF03734 L,D-transpeptidase catalytic domain LX00_15345 PF17969 L,D-transpeptidase C-terminal domain LX00_15350 PF04304 Protein of unknown function (DUF454) LX00_15360 PF08085 Entericidin EcnA/B family LX00_15365 PF01546 Peptidase family M20/M25/M40 LX00_15365 PF07687 Peptidase dimerisation domain LX00_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_15375 PF01627 Hpt domain LX00_15375 PF00072 Response regulator receiver domain LX00_15375 PF01584 CheW-like domain LX00_15380 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LX00_15380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LX00_15385 PF01584 CheW-like domain LX00_15390 PF00072 Response regulator receiver domain LX00_15395 PF00072 Response regulator receiver domain LX00_15410 PF00873 AcrB/AcrD/AcrF family LX00_15415 PF04073 Aminoacyl-tRNA editing domain LX00_15415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LX00_15415 PF03129 Anticodon binding domain LX00_15420 PF07411 Domain of unknown function (DUF1508) LX00_15425 PF08274 PhnA Zinc-Ribbon LX00_15425 PF03831 PhnA domain LX00_15430 PF04343 Protein of unknown function, DUF488 LX00_15440 PF01571 Aminomethyltransferase folate-binding domain LX00_15445 PF13098 Thioredoxin-like domain LX00_15445 PF10411 Disulfide bond isomerase protein N-terminus LX00_15455 PF03547 Membrane transport protein LX00_15460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LX00_15465 PF00593 TonB dependent receptor LX00_15465 PF07715 TonB-dependent Receptor Plug Domain LX00_15470 PF02245 Methylpurine-DNA glycosylase (MPG) LX00_15475 PF06827 Zinc finger found in FPG and IleRS LX00_15475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LX00_15475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LX00_15490 PF01741 Large-conductance mechanosensitive channel, MscL LX00_15500 PF00860 Permease family LX00_15505 PF08468 Methyltransferase small domain N-terminal LX00_15505 PF05175 Methyltransferase small domain LX00_15510 PF00324 Amino acid permease LX00_15515 PF01139 tRNA-splicing ligase RtcB LX00_15525 PF00691 OmpA family LX00_15525 PF13505 Outer membrane protein beta-barrel domain LX00_15535 PF00108 Thiolase, N-terminal domain LX00_15535 PF02803 Thiolase, C-terminal domain LX00_15545 PF00893 Small Multidrug Resistance protein LX00_15555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LX00_15555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LX00_15560 PF01011 PQQ enzyme repeat LX00_15565 PF04966 Carbohydrate-selective porin, OprB family LX00_15570 PF02515 CoA-transferase family III LX00_15575 PF12833 Helix-turn-helix domain LX00_15575 PF02311 AraC-like ligand binding domain LX00_15580 PF02803 Thiolase, C-terminal domain LX00_15580 PF00108 Thiolase, N-terminal domain LX00_15585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_15585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_15585 PF00378 Enoyl-CoA hydratase/isomerase LX00_15610 PF03006 Haemolysin-III related LX00_15615 PF07690 Major Facilitator Superfamily LX00_15615 PF00083 Sugar (and other) transporter LX00_15625 PF07517 SecA DEAD-like domain LX00_15625 PF02810 SEC-C motif LX00_15625 PF07516 SecA Wing and Scaffold domain LX00_15625 PF01043 SecA preprotein cross-linking domain LX00_15630 PF00578 AhpC/TSA family LX00_15630 PF10417 C-terminal domain of 1-Cys peroxiredoxin LX00_15635 PF00753 Metallo-beta-lactamase superfamily LX00_15650 PF08245 Mur ligase middle domain LX00_15650 PF02875 Mur ligase family, glutamate ligase domain LX00_15655 PF01039 Carboxyl transferase domain LX00_15660 PF00290 Tryptophan synthase alpha chain LX00_15685 PF00291 Pyridoxal-phosphate dependent enzyme LX00_15690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LX00_15695 PF00593 TonB dependent receptor LX00_15695 PF07715 TonB-dependent Receptor Plug Domain LX00_15700 PF01923 Cobalamin adenosyltransferase LX00_15720 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LX00_15725 PF00486 Transcriptional regulatory protein, C terminal LX00_15725 PF00072 Response regulator receiver domain LX00_15730 PF00512 His Kinase A (phospho-acceptor) domain LX00_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_15730 PF00672 HAMP domain LX00_15740 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_15740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_15740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_15740 PF12806 Acetyl-CoA dehydrogenase C-terminal like LX00_15745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_15745 PF12806 Acetyl-CoA dehydrogenase C-terminal like LX00_15745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_15745 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_15750 PF06146 Phosphate-starvation-inducible E LX00_15770 PF07715 TonB-dependent Receptor Plug Domain LX00_15770 PF00593 TonB dependent receptor LX00_15780 PF02938 GAD domain LX00_15780 PF01336 OB-fold nucleic acid binding domain LX00_15780 PF00152 tRNA synthetases class II (D, K and N) LX00_15785 PF17101 Stealth protein CR1, conserved region 1 LX00_15785 PF17102 Stealth protein CR3, conserved region 3 LX00_15785 PF11380 Stealth protein CR2, conserved region 2 LX00_15795 PF03275 UDP-galactopyranose mutase LX00_15820 PF13439 Glycosyltransferase Family 4 LX00_15820 PF00534 Glycosyl transferases group 1 LX00_15825 PF00535 Glycosyl transferase family 2 LX00_15830 PF01522 Polysaccharide deacetylase LX00_15845 PF01063 Amino-transferase class IV LX00_15850 PF03710 Glutamate-ammonia ligase adenylyltransferase LX00_15850 PF08335 GlnD PII-uridylyltransferase LX00_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_15855 PF00512 His Kinase A (phospho-acceptor) domain LX00_15855 PF01627 Hpt domain LX00_15855 PF00672 HAMP domain LX00_15855 PF00072 Response regulator receiver domain LX00_15855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LX00_15870 PF04245 37-kD nucleoid-associated bacterial protein LX00_15885 PF02547 Queuosine biosynthesis protein LX00_15900 PF01702 Queuine tRNA-ribosyltransferase LX00_15905 PF02699 Preprotein translocase subunit LX00_15910 PF07549 SecD/SecF GG Motif LX00_15910 PF13721 SecD export protein N-terminal TM region LX00_15910 PF02355 Protein export membrane protein LX00_15915 PF02355 Protein export membrane protein LX00_15915 PF07549 SecD/SecF GG Motif LX00_15920 PF02441 Flavoprotein LX00_15920 PF04127 DNA / pantothenate metabolism flavoprotein LX00_15925 PF04002 RadC-like JAB domain LX00_15930 PF01062 Bestrophin, RFP-TM, chloride channel LX00_15935 PF02811 PHP domain LX00_15940 PF04279 Intracellular septation protein A LX00_15945 PF03795 YCII-related domain LX00_15955 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LX00_15955 PF01266 FAD dependent oxidoreductase LX00_15965 PF04461 Protein of unknown function (DUF520) LX00_15975 PF03061 Thioesterase superfamily LX00_15980 PF00085 Thioredoxin LX00_15985 PF00561 alpha/beta hydrolase fold LX00_15990 PF00753 Metallo-beta-lactamase superfamily LX00_15990 PF04273 Putative phosphatase (DUF442) LX00_16000 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_16000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LX00_16030 PF13936 Helix-turn-helix domain LX00_16030 PF00665 Integrase core domain LX00_16040 PF00990 Diguanylate cyclase, GGDEF domain LX00_16040 PF17152 Periplasmic sensor domain LX00_16045 PF01389 OmpA-like transmembrane domain LX00_16045 PF00691 OmpA family LX00_16050 PF10518 TAT (twin-arginine translocation) pathway signal sequence LX00_16050 PF00149 Calcineurin-like phosphoesterase LX00_16055 PF13091 PLD-like domain LX00_16065 PF13167 GTP-binding GTPase N-terminal LX00_16065 PF16360 GTP-binding GTPase Middle Region LX00_16065 PF01926 50S ribosome-binding GTPase LX00_16085 PF00149 Calcineurin-like phosphoesterase LX00_16090 PF00398 Ribosomal RNA adenine dimethylase LX00_16095 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LX00_16100 PF00572 Ribosomal protein L13 LX00_16105 PF00380 Ribosomal protein S9/S16 LX00_16110 PF00043 Glutathione S-transferase, C-terminal domain LX00_16110 PF13417 Glutathione S-transferase, N-terminal domain LX00_16115 PF04386 Stringent starvation protein B LX00_16125 PF00364 Biotin-requiring enzyme LX00_16125 PF00289 Biotin carboxylase, N-terminal domain LX00_16125 PF02785 Biotin carboxylase C-terminal domain LX00_16125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LX00_16130 PF00378 Enoyl-CoA hydratase/isomerase LX00_16130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LX00_16130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LX00_16135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_16135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_16135 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_16140 PF01039 Carboxyl transferase domain LX00_16155 PF17932 Tetracyclin repressor-like, C-terminal domain LX00_16155 PF00440 Bacterial regulatory proteins, tetR family LX00_16160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_16160 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_16160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_16205 PF01066 CDP-alcohol phosphatidyltransferase LX00_16210 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LX00_16230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LX00_16230 PF00056 lactate/malate dehydrogenase, NAD binding domain LX00_16240 PF01464 Transglycosylase SLT domain LX00_16240 PF10145 Phage-related minor tail protein LX00_16240 PF01551 Peptidase family M23 LX00_16245 PF00919 Uncharacterized protein family UPF0004 LX00_16245 PF01938 TRAM domain LX00_16245 PF04055 Radical SAM superfamily LX00_16250 PF02562 PhoH-like protein LX00_16255 PF02130 Uncharacterized protein family UPF0054 LX00_16280 PF03358 NADPH-dependent FMN reductase LX00_16285 PF03631 Virulence factor BrkB LX00_16290 PF00892 EamA-like transporter family LX00_16300 PF01557 Fumarylacetoacetate (FAA) hydrolase family LX00_16330 PF13936 Helix-turn-helix domain LX00_16330 PF00665 Integrase core domain LX00_16355 PF00575 S1 RNA binding domain LX00_16355 PF00773 RNB domain LX00_16355 PF08206 Ribonuclease B OB domain LX00_16355 PF08461 Ribonuclease R winged-helix domain LX00_16355 PF17876 Cold shock domain LX00_16360 PF01432 Peptidase family M3 LX00_16365 PF09526 Probable metal-binding protein (DUF2387) LX00_16400 PF03937 Flavinator of succinate dehydrogenase LX00_16405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_16405 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_16405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_16410 PF00743 Flavin-binding monooxygenase-like LX00_16415 PF01196 Ribosomal protein L17 LX00_16420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LX00_16420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LX00_16420 PF01000 RNA polymerase Rpb3/RpoA insert domain LX00_16425 PF01479 S4 domain LX00_16425 PF00163 Ribosomal protein S4/S9 N-terminal domain LX00_16430 PF00411 Ribosomal protein S11 LX00_16435 PF00416 Ribosomal protein S13/S18 LX00_16440 PF00444 Ribosomal protein L36 LX00_16445 PF00344 SecY translocase LX00_16450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LX00_16455 PF00327 Ribosomal protein L30p/L7e LX00_16460 PF00333 Ribosomal protein S5, N-terminal domain LX00_16460 PF03719 Ribosomal protein S5, C-terminal domain LX00_16465 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LX00_16470 PF00347 Ribosomal protein L6 LX00_16475 PF00410 Ribosomal protein S8 LX00_16480 PF00253 Ribosomal protein S14p/S29e LX00_16485 PF00281 Ribosomal protein L5 LX00_16485 PF00673 ribosomal L5P family C-terminus LX00_16490 PF00467 KOW motif LX00_16490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LX00_16495 PF00238 Ribosomal protein L14p/L23e LX00_16500 PF00366 Ribosomal protein S17 LX00_16505 PF00831 Ribosomal L29 protein LX00_16510 PF00252 Ribosomal protein L16p/L10e LX00_16515 PF00189 Ribosomal protein S3, C-terminal domain LX00_16515 PF07650 KH domain LX00_16520 PF00237 Ribosomal protein L22p/L17e LX00_16525 PF00203 Ribosomal protein S19 LX00_16530 PF03947 Ribosomal Proteins L2, C-terminal domain LX00_16530 PF00181 Ribosomal Proteins L2, RNA binding domain LX00_16535 PF00276 Ribosomal protein L23 LX00_16540 PF00573 Ribosomal protein L4/L1 family LX00_16545 PF00297 Ribosomal protein L3 LX00_16550 PF00338 Ribosomal protein S10p/S20e LX00_16555 PF00117 Glutamine amidotransferase class-I LX00_16560 PF01053 Cys/Met metabolism PLP-dependent enzyme LX00_16565 PF05872 Bacterial protein of unknown function (DUF853) LX00_16570 PF00970 Oxidoreductase FAD-binding domain LX00_16570 PF00042 Globin LX00_16570 PF00175 Oxidoreductase NAD-binding domain LX00_16575 PF02082 Transcriptional regulator LX00_16580 PF01926 50S ribosome-binding GTPase LX00_16590 PF00375 Sodium:dicarboxylate symporter family LX00_16600 PF01553 Acyltransferase LX00_16620 PF00271 Helicase conserved C-terminal domain LX00_16620 PF17191 RecG wedge domain LX00_16620 PF00270 DEAD/DEAH box helicase LX00_16625 PF00156 Phosphoribosyl transferase domain LX00_16630 PF00293 NUDIX domain LX00_16635 PF03641 Possible lysine decarboxylase LX00_16640 PF01544 CorA-like Mg2+ transporter protein LX00_16650 PF05494 MlaC protein LX00_16660 PF02405 Permease MlaE LX00_16665 PF00005 ABC transporter LX00_16675 PF12343 Cold shock protein DEAD box A LX00_16675 PF03880 DbpA RNA binding domain LX00_16675 PF00271 Helicase conserved C-terminal domain LX00_16675 PF00270 DEAD/DEAH box helicase LX00_16680 PF00459 Inositol monophosphatase family LX00_16685 PF02780 Transketolase, C-terminal domain LX00_16685 PF02779 Transketolase, pyrimidine binding domain LX00_16685 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LX00_16690 PF00925 GTP cyclohydrolase II LX00_16695 PF01218 Coproporphyrinogen III oxidase LX00_16700 PF01488 Shikimate / quinate 5-dehydrogenase LX00_16700 PF08501 Shikimate dehydrogenase substrate binding domain LX00_16700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LX00_16710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LX00_16710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LX00_16710 PF12806 Acetyl-CoA dehydrogenase C-terminal like LX00_16710 PF02770 Acyl-CoA dehydrogenase, middle domain LX00_16720 PF04024 PspC domain LX00_16725 PF00571 CBS domain LX00_16750 PF02091 Glycyl-tRNA synthetase alpha subunit LX00_16755 PF05746 DALR anticodon binding domain LX00_16755 PF02092 Glycyl-tRNA synthetase beta subunit LX00_16760 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system LX00_16780 PF03466 LysR substrate binding domain LX00_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_16810 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LX00_16815 PF04996 Succinylarginine dihydrolase LX00_16820 PF00171 Aldehyde dehydrogenase family LX00_16825 PF04958 Arginine N-succinyltransferase beta subunit LX00_16830 PF00202 Aminotransferase class-III LX00_16835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LX00_16835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LX00_16845 PF00324 Amino acid permease LX00_16855 PF08241 Methyltransferase domain LX00_16875 PF13614 AAA domain LX00_16880 PF01594 AI-2E family transporter LX00_16885 PF00080 Copper/zinc superoxide dismutase (SODC) LX00_16890 PF12805 FUSC-like inner membrane protein yccS LX00_16895 PF07690 Major Facilitator Superfamily LX00_16905 PF02525 Flavodoxin-like fold LX00_16910 PF03992 Antibiotic biosynthesis monooxygenase LX00_16925 PF01565 FAD binding domain LX00_16925 PF02913 FAD linked oxidases, C-terminal domain LX00_16930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LX00_16930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LX00_16935 PF00892 EamA-like transporter family LX00_16940 PF00892 EamA-like transporter family LX00_16950 PF01925 Sulfite exporter TauE/SafE LX00_16955 PF09157 Pseudouridine synthase II TruB, C-terminal LX00_16955 PF01509 TruB family pseudouridylate synthase (N terminal domain) LX00_16955 PF16198 tRNA pseudouridylate synthase B C-terminal domain LX00_16960 PF03280 Proteobacterial lipase chaperone protein LX00_16965 PF00561 alpha/beta hydrolase fold LX00_16970 PF01245 Ribosomal protein L19 LX00_16975 PF01746 tRNA (Guanine-1)-methyltransferase LX00_16980 PF01782 RimM N-terminal domain LX00_16980 PF05239 PRC-barrel domain LX00_16985 PF00886 Ribosomal protein S16 LX00_17025 PF02401 LytB protein LX00_17030 PF00625 Guanylate kinase LX00_17035 PF01192 RNA polymerase Rpb6 LX00_17040 PF13291 ACT domain LX00_17040 PF04607 Region found in RelA / SpoT proteins LX00_17040 PF02824 TGS domain LX00_17045 PF01042 Endoribonuclease L-PSP LX00_17050 PF04324 BFD-like [2Fe-2S] binding domain LX00_17055 PF00210 Ferritin-like domain LX00_17060 PF11846 Virulence factor membrane-bound polymerase, C-terminal LX00_17060 PF15864 Protein glycosylation ligase LX00_17060 PF04932 O-Antigen ligase LX00_17070 PF07963 Prokaryotic N-terminal methylation motif LX00_17070 PF00114 Pilin (bacterial filament) LX00_17080 PF04536 TPM domain LX00_17085 PF04011 LemA family LX00_17095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LX00_17095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LX00_17100 PF04898 Glutamate synthase central domain LX00_17100 PF01645 Conserved region in glutamate synthase LX00_17100 PF00310 Glutamine amidotransferases class-II LX00_17100 PF01493 GXGXG motif LX00_17110 PF01761 3-dehydroquinate synthase LX00_17115 PF01202 Shikimate kinase LX00_17120 PF11741 AMIN domain LX00_17120 PF00263 Bacterial type II and III secretion system protein LX00_17120 PF03958 Bacterial type II/III secretion system short domain LX00_17120 PF07660 Secretin and TonB N terminus short domain LX00_17145 PF00912 Transglycosylase LX00_17145 PF00905 Penicillin binding protein transpeptidase domain LX00_17145 PF17092 Penicillin-binding protein OB-like domain LX00_17150 PF13847 Methyltransferase domain LX00_17160 PF00953 Glycosyl transferase family 4 LX00_17165 PF02875 Mur ligase family, glutamate ligase domain LX00_17165 PF08245 Mur ligase middle domain LX00_17165 PF01225 Mur ligase family, catalytic domain LX00_17170 PF02875 Mur ligase family, glutamate ligase domain LX00_17170 PF01225 Mur ligase family, catalytic domain LX00_17170 PF08245 Mur ligase middle domain LX00_17175 PF00905 Penicillin binding protein transpeptidase domain LX00_17175 PF03717 Penicillin-binding Protein dimerisation domain LX00_17185 PF01795 MraW methylase family LX00_17200 PF00749 tRNA synthetases class I (E and Q), catalytic domain LX00_17230 PF01545 Cation efflux family LX00_17235 PF00873 AcrB/AcrD/AcrF family LX00_17240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_17240 PF00529 HlyD membrane-fusion protein of T1SS LX00_17260 PF04191 Phospholipid methyltransferase LX00_17290 PF12848 ABC transporter LX00_17290 PF00005 ABC transporter LX00_17295 PF01053 Cys/Met metabolism PLP-dependent enzyme LX00_17300 PF00106 short chain dehydrogenase LX00_17305 PF01740 STAS domain LX00_17305 PF00916 Sulfate permease family LX00_17310 PF16921 Tex protein YqgF-like domain LX00_17310 PF09371 Tex-like protein N-terminal domain LX00_17310 PF17674 HHH domain LX00_17310 PF00575 S1 RNA binding domain LX00_17315 PF00486 Transcriptional regulatory protein, C terminal LX00_17315 PF00072 Response regulator receiver domain LX00_17320 PF00512 His Kinase A (phospho-acceptor) domain LX00_17320 PF00672 HAMP domain LX00_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_17325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LX00_17325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LX00_17330 PF00583 Acetyltransferase (GNAT) family LX00_17355 PF00117 Glutamine amidotransferase class-I LX00_17370 PF00977 Histidine biosynthesis protein LX00_17385 PF03992 Antibiotic biosynthesis monooxygenase LX00_17400 PF01636 Phosphotransferase enzyme family LX00_17405 PF00977 Histidine biosynthesis protein LX00_17420 PF00230 Major intrinsic protein LX00_17445 PF02705 K+ potassium transporter LX00_17470 PF00809 Pterin binding enzyme LX00_17475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LX00_17475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LX00_17475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LX00_17475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LX00_17485 PF13610 DDE domain LX00_17490 PF01636 Phosphotransferase enzyme family LX00_17510 PF02522 Aminoglycoside 3-N-acetyltransferase LX00_17535 PF13610 DDE domain LX00_17545 PF01610 Transposase LX00_17545 PF13542 Helix-turn-helix domain of transposase family ISL3 LX00_17545 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LX00_17550 PF07690 Major Facilitator Superfamily LX00_17560 PF01443 Viral (Superfamily 1) RNA helicase LX00_17560 PF03389 MobA/MobL family LX00_17560 PF17841 BID domain of Bartonella effector protein (Bep) LX00_17580 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LX00_17585 PF01636 Phosphotransferase enzyme family LX00_17605 PF02525 Flavodoxin-like fold LX00_17610 PF01638 HxlR-like helix-turn-helix LX00_17640 PF02311 AraC-like ligand binding domain LX00_17640 PF12833 Helix-turn-helix domain LX00_17645 PF00248 Aldo/keto reductase family LX00_17665 PF03466 LysR substrate binding domain LX00_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_17670 PF07690 Major Facilitator Superfamily LX00_17680 PF00324 Amino acid permease LX00_17685 PF00171 Aldehyde dehydrogenase family LX00_17700 PF06018 CodY GAF-like domain LX00_17700 PF13556 PucR C-terminal helix-turn-helix domain LX00_17700 PF17853 GGDEF-like domain LX00_17705 PF12833 Helix-turn-helix domain LX00_17705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LX00_17725 PF01593 Flavin containing amine oxidoreductase LX00_17730 PF05726 Pirin C-terminal cupin domain LX00_17730 PF02678 Pirin LX00_17735 PF00857 Isochorismatase family LX00_17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_17745 PF00171 Aldehyde dehydrogenase family LX00_17750 PF00202 Aminotransferase class-III LX00_17755 PF00392 Bacterial regulatory proteins, gntR family LX00_17755 PF00155 Aminotransferase class I and II LX00_17760 PF00324 Amino acid permease LX00_17770 PF03591 AzlC protein LX00_17780 PF00436 Single-strand binding protein family LX00_17785 PF07690 Major Facilitator Superfamily LX00_17795 PF08543 Phosphomethylpyrimidine kinase LX00_17795 PF02581 Thiamine monophosphate synthase LX00_17795 PF03070 TENA/THI-4/PQQC family LX00_17800 PF06942 GlpM protein LX00_17810 PF08240 Alcohol dehydrogenase GroES-like domain LX00_17810 PF00107 Zinc-binding dehydrogenase LX00_17815 PF00440 Bacterial regulatory proteins, tetR family LX00_17815 PF16925 Tetracyclin repressor-like, C-terminal domain LX00_17820 PF00005 ABC transporter LX00_17820 PF17755 UvrA DNA-binding domain LX00_17820 PF17760 UvrA interaction domain LX00_17825 PF17158 Membrane-associated sensor, integral membrane domain LX00_17825 PF00990 Diguanylate cyclase, GGDEF domain LX00_17835 PF02028 BCCT, betaine/carnitine/choline family transporter LX00_17845 PF00474 Sodium:solute symporter family LX00_17850 PF04341 Protein of unknown function, DUF485 LX00_17855 PF00072 Response regulator receiver domain LX00_17855 PF01627 Hpt domain LX00_17855 PF00512 His Kinase A (phospho-acceptor) domain LX00_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_17855 PF00672 HAMP domain LX00_17865 PF00196 Bacterial regulatory proteins, luxR family LX00_17865 PF00072 Response regulator receiver domain LX00_17870 PF03358 NADPH-dependent FMN reductase LX00_17875 PF00296 Luciferase-like monooxygenase LX00_17880 PF01037 Lrp/AsnC ligand binding domain LX00_17885 PF00857 Isochorismatase family LX00_17890 PF13193 AMP-binding enzyme C-terminal domain LX00_17890 PF00501 AMP-binding enzyme LX00_17890 PF16177 Acetyl-coenzyme A synthetase N-terminus LX00_17900 PF00924 Mechanosensitive ion channel LX00_17905 PF04452 RNA methyltransferase LX00_17910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LX00_17915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LX00_17925 PF00472 RF-1 domain LX00_17925 PF03462 PCRF domain LX00_17935 PF17768 RecJ OB domain LX00_17935 PF02272 DHHA1 domain LX00_17935 PF01368 DHH family LX00_17940 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LX00_17940 PF01243 Pyridoxamine 5'-phosphate oxidase LX00_17945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LX00_17945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LX00_17945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LX00_17945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LX00_17950 PF00478 IMP dehydrogenase / GMP reductase domain LX00_17950 PF00571 CBS domain LX00_17955 PF03692 Putative zinc- or iron-chelating domain LX00_17960 PF00258 Flavodoxin LX00_17960 PF01613 Flavin reductase like domain LX00_17965 PF00593 TonB dependent receptor LX00_17965 PF07715 TonB-dependent Receptor Plug Domain LX00_17970 PF01169 Uncharacterized protein family UPF0016 LX00_17980 PF02817 e3 binding domain LX00_17980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LX00_17980 PF00364 Biotin-requiring enzyme LX00_17985 PF17831 Pyruvate dehydrogenase E1 component middle domain LX00_17985 PF00456 Transketolase, thiamine diphosphate binding domain LX00_17990 PF01551 Peptidase family M23 LX00_18000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LX00_18005 PF00091 Tubulin/FtsZ family, GTPase domain LX00_18005 PF12327 FtsZ family, C-terminal domain LX00_18010 PF02491 SHS2 domain inserted in FTSA LX00_18015 PF08478 POTRA domain, FtsQ-type LX00_18015 PF03799 Cell division protein FtsQ LX00_18020 PF07478 D-ala D-ala ligase C-terminus LX00_18020 PF01820 D-ala D-ala ligase N-terminus LX00_18025 PF01225 Mur ligase family, catalytic domain LX00_18025 PF02875 Mur ligase family, glutamate ligase domain LX00_18025 PF08245 Mur ligase middle domain LX00_18030 PF04101 Glycosyltransferase family 28 C-terminal domain LX00_18030 PF03033 Glycosyltransferase family 28 N-terminal domain LX00_18035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LX00_18035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LX00_18045 PF07715 TonB-dependent Receptor Plug Domain LX00_18045 PF00593 TonB dependent receptor LX00_18050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LX00_18055 PF02463 RecF/RecN/SMC N terminal domain LX00_18065 PF00156 Phosphoribosyl transferase domain LX00_18070 PF03372 Endonuclease/Exonuclease/phosphatase family LX00_18075 PF03960 ArsC family LX00_18085 PF07859 alpha/beta hydrolase fold LX00_18090 PF07694 5TMR of 5TMR-LYT LX00_18090 PF00990 Diguanylate cyclase, GGDEF domain LX00_18095 PF11412 Disulphide bond corrector protein DsbC LX00_18095 PF02683 Cytochrome C biogenesis protein transmembrane region LX00_18125 PF00576 HIUase/Transthyretin family LX00_18130 PF00860 Permease family LX00_18140 PF01494 FAD binding domain LX00_18145 PF03561 Allantoicase repeat LX00_18150 PF04115 Ureidoglycolate lyase LX00_18155 PF01751 Toprim domain LX00_18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_18155 PF00986 DNA gyrase B subunit, carboxyl terminus LX00_18155 PF00204 DNA gyrase B LX00_18160 PF05728 Uncharacterised protein family (UPF0227) LX00_18200 PF04717 Type VI secretion system, phage-baseplate injector LX00_18205 PF02600 Disulfide bond formation protein DsbB LX00_18210 PF04262 Glutamate-cysteine ligase LX00_18225 PF04286 Protein of unknown function (DUF445) LX00_18230 PF00155 Aminotransferase class I and II LX00_18235 PF01554 MatE LX00_18240 PF00106 short chain dehydrogenase LX00_18250 PF00072 Response regulator receiver domain LX00_18250 PF00486 Transcriptional regulatory protein, C terminal LX00_18255 PF11808 Phosphate regulon sensor protein PhoR LX00_18255 PF00989 PAS fold LX00_18255 PF00512 His Kinase A (phospho-acceptor) domain LX00_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LX00_18265 PF02666 Phosphatidylserine decarboxylase LX00_18270 PF00581 Rhodanese-like domain LX00_18275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LX00_18275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LX00_18280 PF02580 D-Tyr-tRNA(Tyr) deacylase LX00_18305 PF00925 GTP cyclohydrolase II LX00_18305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LX00_18310 PF00885 6,7-dimethyl-8-ribityllumazine synthase LX00_18315 PF01029 NusB family LX00_18320 PF00586 AIR synthase related protein, N-terminal domain LX00_18320 PF02769 AIR synthase related protein, C-terminal domain LX00_18325 PF04608 Phosphatidylglycerophosphatase A LX00_18330 PF14602 Hexapeptide repeat of succinyl-transferase LX00_18330 PF00132 Bacterial transferase hexapeptide (six repeats) LX00_18330 PF12804 MobA-like NTP transferase domain LX00_18335 PF01380 SIS domain LX00_18340 PF01177 Asp/Glu/Hydantoin racemase LX00_18355 PF00491 Arginase family LX00_18360 PF01979 Amidohydrolase family LX00_18365 PF00324 Amino acid permease LX00_18370 PF00221 Aromatic amino acid lyase LX00_18375 PF17391 Urocanase N-terminal domain LX00_18375 PF17392 Urocanase C-terminal domain LX00_18375 PF01175 Urocanase Rossmann-like domain LX00_18380 PF05962 HutD LX00_18385 PF00392 Bacterial regulatory proteins, gntR family LX00_18385 PF07702 UTRA domain LX00_18395 PF02492 CobW/HypB/UreG, nucleotide-binding domain LX00_18395 PF07683 Cobalamin synthesis protein cobW C-terminal domain LX00_18405 PF00324 Amino acid permease LX00_18415 PF14497 Glutathione S-transferase, C-terminal domain LX00_18415 PF02798 Glutathione S-transferase, N-terminal domain LX00_18420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LX00_18430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LX00_18435 PF04463 Protein of unknown function (DUF523) LX00_18440 PF01554 MatE LX00_18445 PF01758 Sodium Bile acid symporter family LX00_18450 PF00857 Isochorismatase family LX00_18455 PF00701 Dihydrodipicolinate synthetase family LX00_18465 PF01259 SAICAR synthetase LX00_18475 PF01226 Formate/nitrite transporter LX00_18480 PF00004 ATPase family associated with various cellular activities (AAA) LX00_18480 PF12002 MgsA AAA+ ATPase C terminal LX00_18480 PF16193 AAA C-terminal domain LX00_18485 PF07995 Glucose / Sorbosone dehydrogenase LX00_18490 PF03692 Putative zinc- or iron-chelating domain LX00_18495 PF07043 Protein of unknown function (DUF1328) LX00_18510 PF10576 Iron-sulfur binding domain of endonuclease III LX00_18510 PF00633 Helix-hairpin-helix motif LX00_18510 PF00730 HhH-GPD superfamily base excision DNA repair protein LX00_18510 PF14815 NUDIX domain LX00_18525 PF03352 Methyladenine glycosylase LX00_18530 PF08240 Alcohol dehydrogenase GroES-like domain LX00_18530 PF00107 Zinc-binding dehydrogenase LX00_18535 PF00155 Aminotransferase class I and II LX00_18535 PF00392 Bacterial regulatory proteins, gntR family LX00_18545 PF03466 LysR substrate binding domain LX00_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_18550 PF00248 Aldo/keto reductase family LX00_18555 PF07690 Major Facilitator Superfamily LX00_18565 PF01113 Dihydrodipicolinate reductase, N-terminus LX00_18565 PF05173 Dihydrodipicolinate reductase, C-terminus LX00_18575 PF00226 DnaJ domain LX00_18575 PF01556 DnaJ C terminal domain LX00_18575 PF00684 DnaJ central domain LX00_18585 PF00873 AcrB/AcrD/AcrF family LX00_18590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LX00_18595 PF08361 MAATS-type transcriptional repressor, C-terminal region LX00_18595 PF00440 Bacterial regulatory proteins, tetR family LX00_18600 PF00311 Phosphoenolpyruvate carboxylase LX00_18605 PF00860 Permease family LX00_18610 PF03466 LysR substrate binding domain LX00_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LX00_18625 PF00920 Dehydratase family LX00_18630 PF02911 Formyl transferase, C-terminal domain LX00_18630 PF00551 Formyl transferase LX00_18635 PF01189 16S rRNA methyltransferase RsmB/F LX00_18635 PF01029 NusB family LX00_18645 PF00209 Sodium:neurotransmitter symporter family