locus-tag	class	description
MFABIIPG_00002	COG0592	DNA-directed DNA polymerase activity
MFABIIPG_00004	COG0187	DNA topoisomerase II activity
MFABIIPG_00006	COG0586	Pfam SNARE associated Golgi protein
MFABIIPG_00007	COG0488	(ABC) transporter
MFABIIPG_00012	COG0596	Alpha beta hydrolase
MFABIIPG_00013	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
MFABIIPG_00014	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MFABIIPG_00022	COG0733	neurotransmitter:sodium symporter activity
MFABIIPG_00029	COG0583	DNA-binding transcription factor activity
MFABIIPG_00030	COG2233	PERMEase
MFABIIPG_00033	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_00040	COG2814	Major facilitator Superfamily
MFABIIPG_00041	COG0656	L-ascorbic acid biosynthetic process
MFABIIPG_00042	COG0583	DNA-binding transcription factor activity
MFABIIPG_00044	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MFABIIPG_00045	COG1064	alcohol dehydrogenase
MFABIIPG_00046	COG2818	Glycosylase
MFABIIPG_00049	COG1194	a g-specific adenine glycosylase
MFABIIPG_00053	COG2983	Belongs to the UPF0260 family
MFABIIPG_00054	COG2133	pyrroloquinoline quinone binding
MFABIIPG_00055	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MFABIIPG_00056	COG2116	formate transmembrane transporter activity
MFABIIPG_00060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MFABIIPG_00061	COG1335	isochorismatase
MFABIIPG_00062	COG0385	Bile acid
MFABIIPG_00063	COG0534	Mate efflux family protein
MFABIIPG_00064	COG1683	Conserved Protein
MFABIIPG_00068	COG0625	glutathione transferase activity
MFABIIPG_00070	COG1113	amino acid transport
MFABIIPG_00072	COG0523	cobalamin synthesis protein
MFABIIPG_00074	COG2188	Transcriptional regulator
MFABIIPG_00080	COG0010	Belongs to the arginase family
MFABIIPG_00083	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MFABIIPG_00088	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MFABIIPG_00090	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
MFABIIPG_00091	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
MFABIIPG_00108	COG0534	Mate efflux family protein
MFABIIPG_00109	COG0436	Aminotransferase
MFABIIPG_00110	COG2733	membrane
MFABIIPG_00113	COG2918	glutathione biosynthetic process
MFABIIPG_00116	COG5632	N-Acetylmuramoyl-L-alanine amidase
MFABIIPG_00116	COG3409	Peptidoglycan-binding domain 1 protein
MFABIIPG_00116	COG1388	LysM domain
MFABIIPG_00122	COG3150	esterase
MFABIIPG_00124	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
MFABIIPG_00126	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MFABIIPG_00128	COG2233	PERMEase
MFABIIPG_00129	COG2351	hydroxyisourate hydrolase activity
MFABIIPG_00136	COG3706	GGDEF domain
MFABIIPG_00139	COG1393	Belongs to the ArsC family
MFABIIPG_00140	COG0708	Exodeoxyribonuclease III
MFABIIPG_00144	COG0189	ligase activity
MFABIIPG_00148	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
MFABIIPG_00150	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MFABIIPG_00153	COG4942	peptidase
MFABIIPG_00155	COG0508	dehydrogenase complex catalyzes the overall conversion of
MFABIIPG_00157	COG2119	membrane
MFABIIPG_00158	COG4774	siderophore transport
MFABIIPG_00159	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_00159	COG0426	domain, Protein
MFABIIPG_00164	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MFABIIPG_00169	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_00170	COG1519	Transferase
MFABIIPG_00171	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MFABIIPG_00172	COG0668	transmembrane transport
MFABIIPG_00174	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MFABIIPG_00175	COG1335	isochorismatase
MFABIIPG_00176	COG1522	sequence-specific DNA binding
MFABIIPG_00181	COG0784	Response regulator, receiver
MFABIIPG_00181	COG2198	Histidine kinase
MFABIIPG_00181	COG2205	protein histidine kinase activity
MFABIIPG_00182	COG3162	membrane
MFABIIPG_00183	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MFABIIPG_00185	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MFABIIPG_00188	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MFABIIPG_00189	COG1309	transcriptional regulator
MFABIIPG_00193	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MFABIIPG_00193	COG0352	thiamine-phosphate diphosphorylase activity
MFABIIPG_00193	COG0351	phosphomethylpyrimidine kinase
MFABIIPG_00195	COG2814	Major facilitator Superfamily
MFABIIPG_00198	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MFABIIPG_00200	COG1113	amino acid transport
MFABIIPG_00202	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MFABIIPG_00203	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_00205	COG1335	isochorismatase
MFABIIPG_00212	COG2814	Major facilitator Superfamily
MFABIIPG_00213	COG0583	DNA-binding transcription factor activity
MFABIIPG_00217	COG0667	Aldo Keto reductase
MFABIIPG_00221	COG1733	regulation of RNA biosynthetic process
MFABIIPG_00224	COG1733	regulation of RNA biosynthetic process
MFABIIPG_00225	COG2249	NAD(P)H dehydrogenase (quinone) activity
MFABIIPG_00227	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MFABIIPG_00251	COG0582	viral genome integration into host DNA
MFABIIPG_00262	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
MFABIIPG_00270	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MFABIIPG_00276	COG0427	acetyl-CoA hydrolase
MFABIIPG_00280	COG0659	secondary active sulfate transmembrane transporter activity
MFABIIPG_00281	COG4221	oxidoreductase activity
MFABIIPG_00282	COG2873	o-acetylhomoserine
MFABIIPG_00283	COG0488	(ABC) transporter
MFABIIPG_00296	COG0833	amino acid
MFABIIPG_00305	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MFABIIPG_00306	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MFABIIPG_00309	COG2226	methyltransferase
MFABIIPG_00319	COG0070	glutamate synthase
MFABIIPG_00319	COG0067	glutamate synthase
MFABIIPG_00319	COG0069	glutamate synthase activity
MFABIIPG_00320	COG0493	'glutamate synthase
MFABIIPG_00322	COG1704	LemA family
MFABIIPG_00323	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
MFABIIPG_00326	COG3307	-O-antigen
MFABIIPG_00330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MFABIIPG_00332	COG0194	GDP metabolic process
MFABIIPG_00342	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MFABIIPG_00346	COG5380	lipid catabolic process
MFABIIPG_00347	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MFABIIPG_00352	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MFABIIPG_00353	COG0277	FAD linked oxidase domain protein
MFABIIPG_00355	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
MFABIIPG_00356	COG2249	NAD(P)H dehydrogenase (quinone) activity
MFABIIPG_00359	COG1289	transmembrane transporter activity
MFABIIPG_00361	COG0628	permease
MFABIIPG_00368	COG0833	amino acid
MFABIIPG_00369	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MFABIIPG_00370	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MFABIIPG_00372	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_00380	COG0583	DNA-binding transcription factor activity
MFABIIPG_00390	COG0517	IMP dehydrogenase activity
MFABIIPG_00391	COG1983	PspC domain protein
MFABIIPG_00393	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00396	COG0408	coproporphyrinogen oxidase activity
MFABIIPG_00400	COG0513	Belongs to the DEAD box helicase family
MFABIIPG_00402	COG1127	ABC transporter
MFABIIPG_00403	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MFABIIPG_00405	COG2854	intermembrane phospholipid transfer
MFABIIPG_00407	COG0598	Magnesium transport protein CorA
MFABIIPG_00409	COG0494	nUDIX hydrolase
MFABIIPG_00410	COG1040	competence protein
MFABIIPG_00411	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MFABIIPG_00415	COG1946	Acyl-CoA thioesterase
MFABIIPG_00416	COG1301	dicarboxylic acid transport
MFABIIPG_00419	COG1959	2 iron, 2 sulfur cluster binding
MFABIIPG_00420	COG1017	nitric oxide dioxygenase activity
MFABIIPG_00420	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MFABIIPG_00421	COG0433	COG0433 Predicted ATPase
MFABIIPG_00422	COG0626	cystathionine gamma-synthase activity
MFABIIPG_00453	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00454	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
MFABIIPG_00461	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
MFABIIPG_00462	COG0339	signal peptide processing
MFABIIPG_00463	COG0557	exoribonuclease II activity
MFABIIPG_00472	COG0179	Fumarylacetoacetate (FAA) hydrolase
MFABIIPG_00473	COG2169	Transcriptional regulator
MFABIIPG_00474	COG0697	spore germination
MFABIIPG_00475	COG1295	ribonuclease BN
MFABIIPG_00482	COG1702	phosphate starvation-inducible protein PhoH
MFABIIPG_00484	COG0739	heme binding
MFABIIPG_00484	COG0741	lytic transglycosylase activity
MFABIIPG_00484	COG1196	nuclear chromosome segregation
MFABIIPG_00490	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
MFABIIPG_00491	COG1183	phosphatidylcholine synthase activity
MFABIIPG_00500	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00501	COG1309	transcriptional regulator
MFABIIPG_00504	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MFABIIPG_00505	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00509	COG2969	positive regulation of protein catabolic process
MFABIIPG_00511	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MFABIIPG_00514	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MFABIIPG_00515	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
MFABIIPG_00519	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MFABIIPG_00521	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MFABIIPG_00522	COG1408	metallophosphoesterase
MFABIIPG_00524	COG2199	diguanylate cyclase activity
MFABIIPG_00536	COG1607	acyl-coa hydrolase
MFABIIPG_00542	COG2350	Protein conserved in bacteria
MFABIIPG_00544	COG0613	PHP domain protein
MFABIIPG_00545	COG3781	membrane
MFABIIPG_00547	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MFABIIPG_00550	COG1862	Preprotein translocase
MFABIIPG_00556	COG2205	protein histidine kinase activity
MFABIIPG_00557	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
MFABIIPG_00561	COG0726	polysaccharide deacetylase
MFABIIPG_00562	COG0463	Glycosyl transferase, family 2
MFABIIPG_00563	COG0438	transferase activity, transferring glycosyl groups
MFABIIPG_00576	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00577	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_00579	COG2205	protein histidine kinase activity
MFABIIPG_00580	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_00581	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
MFABIIPG_00585	COG2096	Adenosyltransferase
MFABIIPG_00595	COG0285	dihydrofolate synthase activity
MFABIIPG_00599	COG0450	alkyl hydroperoxide reductase
MFABIIPG_00602	COG0477	Major facilitator Superfamily
MFABIIPG_00603	COG1272	protein, Hemolysin III
MFABIIPG_00605	COG2153	protein acetylation
MFABIIPG_00609	COG0183	Belongs to the thiolase family
MFABIIPG_00610	COG2207	Transcriptional regulator
MFABIIPG_00614	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MFABIIPG_00618	COG0183	Belongs to the thiolase family
MFABIIPG_00620	COG2885	chlorophyll binding
MFABIIPG_00620	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
MFABIIPG_00622	COG1690	Belongs to the RtcB family
MFABIIPG_00623	COG0833	amino acid
MFABIIPG_00625	COG2233	PERMEase
MFABIIPG_00626	COG1217	gtp-binding protein TYPA
MFABIIPG_00631	COG2094	Belongs to the DNA glycosylase MPG family
MFABIIPG_00632	COG4772	TonB-dependent receptor
MFABIIPG_00633	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_00636	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MFABIIPG_00637	COG0354	folic acid binding
MFABIIPG_00639	COG3189	MarR family transcriptional regulator
MFABIIPG_00640	COG2824	Alkylphosphonate utilization operon protein PhnA
MFABIIPG_00641	COG3422	double-strand break repair
MFABIIPG_00649	COG0840	transmembrane signaling receptor activity
MFABIIPG_00652	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MFABIIPG_00655	COG5510	response to toxic substance
MFABIIPG_00657	COG2832	Protein of unknown function (DUF454)
MFABIIPG_00658	COG1376	ErfK ybiS ycfS ynhG family protein
MFABIIPG_00666	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MFABIIPG_00668	COG1289	transmembrane transporter activity
MFABIIPG_00669	COG2814	Major facilitator Superfamily
MFABIIPG_00672	COG1115	amino acid carrier protein
MFABIIPG_00673	COG1752	Esterase of the alpha-beta hydrolase superfamily
MFABIIPG_00674	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MFABIIPG_00675	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
MFABIIPG_00680	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MFABIIPG_00682	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MFABIIPG_00683	COG1077	Cell shape determining protein MreB Mrl
MFABIIPG_00684	COG1792	Involved in formation and maintenance of cell shape
MFABIIPG_00685	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
MFABIIPG_00686	COG0424	maF-like protein
MFABIIPG_00687	COG1530	ribonuclease E activity
MFABIIPG_00689	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MFABIIPG_00691	COG0560	Phosphoserine phosphatase
MFABIIPG_00693	COG2249	NAD(P)H dehydrogenase (quinone) activity
MFABIIPG_00698	COG2207	Transcriptional regulator
MFABIIPG_00702	COG1113	amino acid transport
MFABIIPG_00703	COG2828	Protein conserved in bacteria
MFABIIPG_00704	COG0142	geranyltranstransferase activity
MFABIIPG_00705	COG2315	Protein conserved in bacteria
MFABIIPG_00708	COG1752	Esterase of the alpha-beta hydrolase superfamily
MFABIIPG_00712	COG2194	sulfuric ester hydrolase activity
MFABIIPG_00713	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_00714	COG0642	Histidine kinase
MFABIIPG_00716	COG0004	ammonium transporteR
MFABIIPG_00717	COG0583	DNA-binding transcription factor activity
MFABIIPG_00721	COG0525	valine-tRNA ligase activity
MFABIIPG_00723	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_00725	COG0393	Putative heavy-metal-binding
MFABIIPG_00726	COG0393	Putative heavy-metal-binding
MFABIIPG_00727	COG1538	Outer membrane efflux protein
MFABIIPG_00729	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_00730	COG0671	phosphoesterase, PA-phosphatase related
MFABIIPG_00735	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
MFABIIPG_00738	COG1648	precorrin-2 dehydrogenase activity
MFABIIPG_00738	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MFABIIPG_00739	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
MFABIIPG_00740	COG1733	regulation of RNA biosynthetic process
MFABIIPG_00742	COG0531	amino acid
MFABIIPG_00745	COG0321	lipoyl(octanoyl) transferase activity
MFABIIPG_00746	COG2921	Belongs to the UPF0250 family
MFABIIPG_00753	COG2009	succinate dehydrogenase
MFABIIPG_00754	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
MFABIIPG_00755	COG1053	succinate dehydrogenase
MFABIIPG_00756	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MFABIIPG_00759	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MFABIIPG_00765	COG2354	Protein conserved in bacteria
MFABIIPG_00766	COG2321	neutral zinc metallopeptidase
MFABIIPG_00778	COG2843	Capsule synthesis protein
MFABIIPG_00781	COG0589	response to stress
MFABIIPG_00785	COG0505	Belongs to the CarA family
MFABIIPG_00790	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MFABIIPG_00791	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
MFABIIPG_00801	COG0477	Major facilitator Superfamily
MFABIIPG_00802	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MFABIIPG_00805	COG1597	lipid kinase activity
MFABIIPG_00806	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MFABIIPG_00811	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MFABIIPG_00812	COG0584	glycerophosphoryl diester phosphodiesterase
MFABIIPG_00816	COG0741	lytic transglycosylase activity
MFABIIPG_00820	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MFABIIPG_00823	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MFABIIPG_00830	COG0778	Nitroreductase
MFABIIPG_00833	COG1929	Belongs to the glycerate kinase type-1 family
MFABIIPG_00834	COG0243	molybdopterin cofactor binding
MFABIIPG_00835	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MFABIIPG_00836	COG3339	Conserved Protein
MFABIIPG_00838	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
MFABIIPG_00841	COG1113	amino acid transport
MFABIIPG_00843	COG0019	diaminopimelate decarboxylase activity
MFABIIPG_00845	COG2267	carboxylic ester hydrolase activity
MFABIIPG_00846	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_00847	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
MFABIIPG_00853	COG0463	Glycosyl transferase, family 2
MFABIIPG_00857	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_00864	COG4591	ABC-type transport system involved in lipoprotein release permease component
MFABIIPG_00865	COG1136	(ABC) transporter
MFABIIPG_00866	COG0658	competence protein
MFABIIPG_00866	COG2333	competence protein COMEC
MFABIIPG_00868	COG0616	signal peptide processing
MFABIIPG_00868	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MFABIIPG_00869	COG0596	Alpha beta hydrolase
MFABIIPG_00870	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
MFABIIPG_00872	COG0628	permease
MFABIIPG_00879	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MFABIIPG_00883	COG0823	Involved in the tonB-independent uptake of proteins
MFABIIPG_00887	COG0824	Thioesterase
MFABIIPG_00888	COG1473	amidohydrolase
MFABIIPG_00892	COG0047	phosphoribosylformylglycinamidine synthase activity
MFABIIPG_00892	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MFABIIPG_00893	COG2814	Major facilitator Superfamily
MFABIIPG_00896	COG1024	Enoyl-CoA hydratase
MFABIIPG_00897	COG1051	belongs to the nudix hydrolase family
MFABIIPG_00897	COG1056	cytidyltransferase-related domain
MFABIIPG_00899	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MFABIIPG_00902	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
MFABIIPG_00905	COG4625	pathogenesis
MFABIIPG_00906	COG0583	DNA-binding transcription factor activity
MFABIIPG_00907	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
MFABIIPG_00908	COG4208	sulfate ABC transporter
MFABIIPG_00909	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
MFABIIPG_00911	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
MFABIIPG_00912	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MFABIIPG_00913	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
MFABIIPG_00917	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MFABIIPG_00920	COG0681	Belongs to the peptidase S26 family
MFABIIPG_00923	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MFABIIPG_00925	COG1381	Involved in DNA repair and RecF pathway recombination
MFABIIPG_00926	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
MFABIIPG_00928	COG4221	oxidoreductase activity
MFABIIPG_00933	COG0436	Aminotransferase
MFABIIPG_00937	COG0556	nucleotide-excision repair
MFABIIPG_00948	COG2070	2-Nitropropane dioxygenase
MFABIIPG_00954	COG1215	transferase activity, transferring glycosyl groups
MFABIIPG_00957	COG0415	Belongs to the DNA photolyase family
MFABIIPG_00959	COG1252	NADH dehydrogenase
MFABIIPG_00960	COG1686	Belongs to the peptidase S11 family
MFABIIPG_00963	COG1187	pseudouridine synthase activity
MFABIIPG_00968	COG0477	Major facilitator Superfamily
MFABIIPG_00969	COG0583	DNA-binding transcription factor activity
MFABIIPG_00970	COG1823	symporter activity
MFABIIPG_00972	COG0612	Peptidase, M16
MFABIIPG_00978	COG1203	CRISPR-associated helicase, Cas3
MFABIIPG_00983	COG0352	thiamine-phosphate diphosphorylase activity
MFABIIPG_00990	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MFABIIPG_00993	COG1309	transcriptional regulator
MFABIIPG_00995	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MFABIIPG_00996	COG0076	glutamate decarboxylase activity
MFABIIPG_00998	COG1522	sequence-specific DNA binding
MFABIIPG_00999	COG3961	Belongs to the TPP enzyme family
MFABIIPG_01000	COG1113	amino acid transport
MFABIIPG_01001	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MFABIIPG_01002	COG0573	inorganic phosphate transmembrane transporter activity
MFABIIPG_01004	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MFABIIPG_01005	COG0616	signal peptide processing
MFABIIPG_01012	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
MFABIIPG_01013	COG1686	Belongs to the peptidase S11 family
MFABIIPG_01018	COG0583	DNA-binding transcription factor activity
MFABIIPG_01019	COG1067	ATP-dependent peptidase activity
MFABIIPG_01024	COG4943	cyclic-guanylate-specific phosphodiesterase activity
MFABIIPG_01028	COG1966	Carbon starvation protein
MFABIIPG_01029	COG2879	small protein
MFABIIPG_01031	COG0583	DNA-binding transcription factor activity
MFABIIPG_01032	COG0006	proline dipeptidase activity
MFABIIPG_01033	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MFABIIPG_01034	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MFABIIPG_01036	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_01037	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MFABIIPG_01038	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MFABIIPG_01038	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
MFABIIPG_01049	COG1741	Belongs to the pirin family
MFABIIPG_01051	COG2964	Protein conserved in bacteria
MFABIIPG_01054	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MFABIIPG_01057	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MFABIIPG_01058	COG4605	iron ion homeostasis
MFABIIPG_01059	COG4604	ABC transporter, ATP-binding protein
MFABIIPG_01060	COG4607	ABC-type enterochelin transport system periplasmic component
MFABIIPG_01061	COG4774	siderophore transport
MFABIIPG_01063	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MFABIIPG_01064	COG1021	2,3-dihydroxybenzoate-AMP ligase
MFABIIPG_01065	COG3433	isochorismatase activity
MFABIIPG_01065	COG1535	isochorismatase
MFABIIPG_01068	COG1132	(ABC) transporter
MFABIIPG_01069	COG1132	(ABC) transporter
MFABIIPG_01070	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
MFABIIPG_01072	COG1169	isochorismate synthase
MFABIIPG_01075	COG3739	integral membrane protein
MFABIIPG_01079	COG0302	gtp cyclohydrolase
MFABIIPG_01081	COG1529	Aldehyde oxidase and xanthine dehydrogenase
MFABIIPG_01087	COG0308	aminopeptidase N
MFABIIPG_01088	COG0512	Glutamine amidotransferase of anthranilate synthase
MFABIIPG_01091	COG0174	glutamine synthetase
MFABIIPG_01093	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
MFABIIPG_01100	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MFABIIPG_01101	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MFABIIPG_01102	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MFABIIPG_01106	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MFABIIPG_01107	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MFABIIPG_01108	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
MFABIIPG_01111	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01112	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MFABIIPG_01113	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MFABIIPG_01116	COG2223	nitrite transmembrane transporter activity
MFABIIPG_01118	COG0024	Methionine aminopeptidase
MFABIIPG_01119	COG0052	Belongs to the universal ribosomal protein uS2 family
MFABIIPG_01122	COG2207	Transcriptional regulator
MFABIIPG_01127	COG2951	lytic endotransglycosylase activity
MFABIIPG_01128	COG0772	Belongs to the SEDS family
MFABIIPG_01131	COG0842	Transport permease protein
MFABIIPG_01132	COG1131	(ABC) transporter
MFABIIPG_01140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_01143	COG4215	(ABC) transporter
MFABIIPG_01144	COG4160	amino acid transport
MFABIIPG_01145	COG4598	ABC transporter
MFABIIPG_01147	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
MFABIIPG_01148	COG0826	peptidase U32
MFABIIPG_01149	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MFABIIPG_01152	COG1720	tRNA m6t6A37 methyltransferase activity
MFABIIPG_01154	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MFABIIPG_01157	COG0642	Histidine kinase
MFABIIPG_01159	COG0494	nUDIX hydrolase
MFABIIPG_01161	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MFABIIPG_01162	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MFABIIPG_01163	COG3139	Protein of unknown function (DUF1315)
MFABIIPG_01164	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MFABIIPG_01165	COG1301	dicarboxylic acid transport
MFABIIPG_01166	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01167	COG2819	hydrolase of the alpha beta superfamily
MFABIIPG_01169	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MFABIIPG_01171	COG2195	Cleaves the N-terminal amino acid of tripeptides
MFABIIPG_01172	COG1234	tRNA 3'-trailer cleavage
MFABIIPG_01177	COG2363	Small membrane protein
MFABIIPG_01181	COG0513	Belongs to the DEAD box helicase family
MFABIIPG_01183	COG0778	Nitroreductase
MFABIIPG_01189	COG1286	toxin biosynthetic process
MFABIIPG_01194	COG4783	chaperone-mediated protein folding
MFABIIPG_01195	COG1610	YqeY-like protein
MFABIIPG_01215	COG3111	PFAM Bacterial OB fold (BOF) protein
MFABIIPG_01220	COG3243	poly(R)-hydroxyalkanoic acid synthase
MFABIIPG_01221	COG0786	glutamate:sodium symporter activity
MFABIIPG_01223	COG0583	DNA-binding transcription factor activity
MFABIIPG_01225	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01228	COG2186	Transcriptional regulator
MFABIIPG_01240	COG0477	Major facilitator Superfamily
MFABIIPG_01244	COG2995	paraquat-inducible protein a
MFABIIPG_01245	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
MFABIIPG_01245	COG3008	intermembrane lipid transfer
MFABIIPG_01247	COG2351	hydroxyisourate hydrolase activity
MFABIIPG_01255	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
MFABIIPG_01257	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
MFABIIPG_01258	COG0642	Histidine kinase
MFABIIPG_01259	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_01263	COG1794	racemase activity, acting on amino acids and derivatives
MFABIIPG_01269	COG1301	dicarboxylic acid transport
MFABIIPG_01271	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MFABIIPG_01272	COG2011	ABC-type metal ion transport system permease component
MFABIIPG_01273	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MFABIIPG_01274	COG1464	Belongs to the NlpA lipoprotein family
MFABIIPG_01275	COG0151	Belongs to the GarS family
MFABIIPG_01276	COG0138	bifunctional purine biosynthesis protein purh
MFABIIPG_01277	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
MFABIIPG_01283	COG2308	Evidence 4 Homologs of previously reported genes of
MFABIIPG_01285	COG1305	Transglutaminase-like
MFABIIPG_01287	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MFABIIPG_01288	COG0305	Participates in initiation and elongation during chromosome replication
MFABIIPG_01293	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MFABIIPG_01295	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MFABIIPG_01296	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MFABIIPG_01301	COG0726	polysaccharide deacetylase
MFABIIPG_01301	COG1649	PFAM Uncharacterised BCR, COG1649
MFABIIPG_01302	COG1215	transferase activity, transferring glycosyl groups
MFABIIPG_01303	COG3658	cytochrome
MFABIIPG_01305	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MFABIIPG_01308	COG0583	DNA-binding transcription factor activity
MFABIIPG_01312	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MFABIIPG_01313	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MFABIIPG_01316	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01317	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MFABIIPG_01318	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_01323	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
MFABIIPG_01324	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
MFABIIPG_01326	COG2205	protein histidine kinase activity
MFABIIPG_01327	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_01328	COG0174	glutamine synthetase
MFABIIPG_01332	COG0729	surface antigen
MFABIIPG_01337	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MFABIIPG_01338	COG2814	Major facilitator Superfamily
MFABIIPG_01341	COG0583	DNA-binding transcription factor activity
MFABIIPG_01344	COG1187	pseudouridine synthase activity
MFABIIPG_01348	COG0802	atpase or kinase
MFABIIPG_01349	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MFABIIPG_01351	COG1923	regulation of RNA biosynthetic process
MFABIIPG_01352	COG0697	spore germination
MFABIIPG_01356	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MFABIIPG_01357	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MFABIIPG_01357	COG0519	Catalyzes the synthesis of GMP from XMP
MFABIIPG_01358	COG4302	ethanolamine ammonia-lyase activity
MFABIIPG_01359	COG4303	Ethanolamine ammonia lyase large subunit
MFABIIPG_01360	COG0531	amino acid
MFABIIPG_01364	COG1454	alcohol dehydrogenase
MFABIIPG_01365	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MFABIIPG_01370	COG0308	aminopeptidase N
MFABIIPG_01378	COG1605	Chorismate mutase
MFABIIPG_01381	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
MFABIIPG_01384	COG1309	transcriptional regulator
MFABIIPG_01386	COG0668	transmembrane transport
MFABIIPG_01392	COG4773	Receptor
MFABIIPG_01396	COG0488	(ABC) transporter
MFABIIPG_01397	COG0589	response to stress
MFABIIPG_01401	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
MFABIIPG_01403	COG3135	benzoate transporter
MFABIIPG_01404	COG1522	sequence-specific DNA binding
MFABIIPG_01406	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MFABIIPG_01407	COG0583	DNA-binding transcription factor activity
MFABIIPG_01409	COG0183	Belongs to the thiolase family
MFABIIPG_01411	COG2030	dehydratase
MFABIIPG_01412	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MFABIIPG_01415	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MFABIIPG_01418	COG0824	Thioesterase
MFABIIPG_01419	COG1454	alcohol dehydrogenase
MFABIIPG_01421	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MFABIIPG_01425	COG0069	glutamate synthase activity
MFABIIPG_01429	COG2814	Major facilitator Superfamily
MFABIIPG_01432	COG0511	ligase activity, forming carbon-carbon bonds
MFABIIPG_01435	COG1116	anion transmembrane transporter activity
MFABIIPG_01435	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MFABIIPG_01436	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_01438	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MFABIIPG_01438	COG2146	nitrite reductase [NAD(P)H] activity
MFABIIPG_01439	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MFABIIPG_01440	COG0243	molybdopterin cofactor binding
MFABIIPG_01442	COG0243	molybdopterin cofactor binding
MFABIIPG_01443	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
MFABIIPG_01446	COG0315	cyclic pyranopterin monophosphate synthase activity
MFABIIPG_01446	COG0521	Mo-molybdopterin cofactor biosynthetic process
MFABIIPG_01447	COG0303	'Molybdopterin
MFABIIPG_01450	COG0697	spore germination
MFABIIPG_01454	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
MFABIIPG_01455	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MFABIIPG_01466	COG2204	response regulator
MFABIIPG_01467	COG3852	Histidine kinase
MFABIIPG_01471	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MFABIIPG_01472	COG0575	Belongs to the CDS family
MFABIIPG_01479	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
MFABIIPG_01481	COG2137	regulation of response to DNA damage stimulus
MFABIIPG_01483	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MFABIIPG_01484	COG1011	Hydrolase
MFABIIPG_01489	COG1522	sequence-specific DNA binding
MFABIIPG_01491	COG1113	amino acid transport
MFABIIPG_01494	COG0659	secondary active sulfate transmembrane transporter activity
MFABIIPG_01495	COG2135	peptidase activity
MFABIIPG_01498	COG3300	MHYT domain
MFABIIPG_01498	COG5001	Diguanylate cyclase
MFABIIPG_01502	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
MFABIIPG_01502	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MFABIIPG_01502	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MFABIIPG_01503	COG1105	Belongs to the carbohydrate kinase PfkB family
MFABIIPG_01504	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MFABIIPG_01504	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MFABIIPG_01510	COG0024	Methionine aminopeptidase
MFABIIPG_01511	COG0583	DNA-binding transcription factor activity
MFABIIPG_01513	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
MFABIIPG_01514	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MFABIIPG_01515	COG0516	GMP reductase activity
MFABIIPG_01515	COG0517	IMP dehydrogenase activity
MFABIIPG_01520	COG0552	protein localization to endoplasmic reticulum
MFABIIPG_01522	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
MFABIIPG_01524	COG4890	Cyd operon protein YbgT
MFABIIPG_01525	COG1294	oxidase, subunit
MFABIIPG_01528	COG1585	Membrane protein implicated in regulation of membrane protease activity
MFABIIPG_01530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MFABIIPG_01531	COG4774	siderophore transport
MFABIIPG_01534	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MFABIIPG_01535	COG0569	domain protein
MFABIIPG_01536	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MFABIIPG_01542	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
MFABIIPG_01543	COG0542	response to heat
MFABIIPG_01548	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_01548	COG0446	pyridine nucleotide-disulphide oxidoreductase
MFABIIPG_01557	COG2323	membrane
MFABIIPG_01558	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
MFABIIPG_01560	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MFABIIPG_01561	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MFABIIPG_01562	COG0183	Belongs to the thiolase family
MFABIIPG_01563	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MFABIIPG_01564	COG0596	Alpha beta hydrolase
MFABIIPG_01565	COG2271	Major facilitator Superfamily
MFABIIPG_01566	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MFABIIPG_01567	COG3485	protocatechuate 3,4-dioxygenase
MFABIIPG_01568	COG3485	protocatechuate 3,4-dioxygenase
MFABIIPG_01569	COG0710	3-dehydroquinate dehydratase activity
MFABIIPG_01570	COG3420	alginic acid biosynthetic process
MFABIIPG_01571	COG3659	wide pore channel activity
MFABIIPG_01572	COG4993	Dehydrogenase
MFABIIPG_01574	COG2391	methyltransferase activity
MFABIIPG_01577	COG1414	Transcriptional regulator
MFABIIPG_01578	COG0583	DNA-binding transcription factor activity
MFABIIPG_01579	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01585	COG2814	Major facilitator Superfamily
MFABIIPG_01587	COG0154	amidase activity
MFABIIPG_01591	COG4638	Rieske (2fe-2S)
MFABIIPG_01593	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_01597	COG3733	amine oxidase
MFABIIPG_01599	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_01601	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MFABIIPG_01602	COG0183	Belongs to the thiolase family
MFABIIPG_01603	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MFABIIPG_01604	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MFABIIPG_01606	COG4829	muconolactone delta-isomerase
MFABIIPG_01607	COG4948	Mandelate Racemase Muconate Lactonizing
MFABIIPG_01608	COG0583	DNA-binding transcription factor activity
MFABIIPG_01610	COG2186	Transcriptional regulator
MFABIIPG_01614	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_01617	COG0446	pyridine nucleotide-disulphide oxidoreductase
MFABIIPG_01617	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_01625	COG1309	transcriptional regulator
MFABIIPG_01628	COG4689	acetoacetate decarboxylase
MFABIIPG_01630	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_01635	COG1335	isochorismatase
MFABIIPG_01636	COG0583	DNA-binding transcription factor activity
MFABIIPG_01638	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MFABIIPG_01638	COG0475	glutathione-regulated potassium exporter activity
MFABIIPG_01640	COG1473	amidohydrolase
MFABIIPG_01654	COG2188	Transcriptional regulator
MFABIIPG_01657	COG0583	DNA-binding transcription factor activity
MFABIIPG_01660	COG1566	PFAM secretion protein HlyD family protein
MFABIIPG_01663	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_01664	COG0129	dihydroxy-acid dehydratase activity
MFABIIPG_01666	COG0583	DNA-binding transcription factor activity
MFABIIPG_01667	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MFABIIPG_01669	COG2084	Dehydrogenase
MFABIIPG_01670	COG2207	Transcriptional regulator
MFABIIPG_01671	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MFABIIPG_01684	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
MFABIIPG_01687	COG0556	nucleotide-excision repair
MFABIIPG_01693	COG1073	alpha beta
MFABIIPG_01695	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01698	COG2207	Transcriptional regulator
MFABIIPG_01700	COG2205	protein histidine kinase activity
MFABIIPG_01701	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_01702	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_01703	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MFABIIPG_01704	COG1538	Outer membrane efflux protein
MFABIIPG_01706	COG2072	flavoprotein involved in K transport
MFABIIPG_01708	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MFABIIPG_01712	COG3539	Fimbrial protein
MFABIIPG_01717	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
MFABIIPG_01719	COG0753	catalase activity
MFABIIPG_01722	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MFABIIPG_01734	COG3433	isochorismatase activity
MFABIIPG_01734	COG1535	isochorismatase
MFABIIPG_01735	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01736	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MFABIIPG_01737	COG4149	molybdate abc transporter
MFABIIPG_01738	COG0725	ABC transporter, periplasmic molybdate-binding protein
MFABIIPG_01740	COG4638	Rieske (2fe-2S)
MFABIIPG_01741	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
MFABIIPG_01742	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MFABIIPG_01742	COG0543	2 iron, 2 sulfur cluster binding
MFABIIPG_01745	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_01747	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01750	COG2207	Transcriptional regulator
MFABIIPG_01751	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_01752	COG2610	gluconate transmembrane transporter activity
MFABIIPG_01754	COG0583	DNA-binding transcription factor activity
MFABIIPG_01757	COG2031	fatty acid transporter
MFABIIPG_01758	COG0183	Belongs to the thiolase family
MFABIIPG_01759	COG0583	DNA-binding transcription factor activity
MFABIIPG_01760	COG0583	DNA-binding transcription factor activity
MFABIIPG_01763	COG1027	Aspartate ammonia-lyase
MFABIIPG_01765	COG0477	Major facilitator Superfamily
MFABIIPG_01769	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MFABIIPG_01770	COG4521	taurine ABC transporter
MFABIIPG_01773	COG2188	Transcriptional regulator
MFABIIPG_01775	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MFABIIPG_01776	COG1733	regulation of RNA biosynthetic process
MFABIIPG_01777	COG3708	Transcriptional regulator
MFABIIPG_01777	COG2207	Transcriptional regulator
MFABIIPG_01780	COG0730	response to heat
MFABIIPG_01782	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MFABIIPG_01782	COG3453	Protein conserved in bacteria
MFABIIPG_01784	COG3781	membrane
MFABIIPG_01785	COG1063	alcohol dehydrogenase
MFABIIPG_01787	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MFABIIPG_01788	COG0508	dehydrogenase complex catalyzes the overall conversion of
MFABIIPG_01789	COG0022	dehydrogenase e1 component
MFABIIPG_01790	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MFABIIPG_01791	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MFABIIPG_01794	COG3706	GGDEF domain
MFABIIPG_01797	COG0133	tryptophan synthase activity
MFABIIPG_01799	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MFABIIPG_01806	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MFABIIPG_01811	COG2226	methyltransferase
MFABIIPG_01822	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
MFABIIPG_01823	COG4773	Receptor
MFABIIPG_01827	COG0730	response to heat
MFABIIPG_01828	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
MFABIIPG_01831	COG0406	alpha-ribazole phosphatase activity
MFABIIPG_01832	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
MFABIIPG_01835	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MFABIIPG_01841	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
MFABIIPG_01843	COG4264	IucA IucC family
MFABIIPG_01844	COG4264	IucA IucC family
MFABIIPG_01845	COG2814	Major facilitator Superfamily
MFABIIPG_01848	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MFABIIPG_01851	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01852	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_01853	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MFABIIPG_01854	COG2207	Transcriptional regulator
MFABIIPG_01855	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MFABIIPG_01856	COG0776	regulation of translation
MFABIIPG_01861	COG0822	iron-sulfur transferase activity
MFABIIPG_01862	COG0316	Belongs to the HesB IscA family
MFABIIPG_01868	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MFABIIPG_01872	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
MFABIIPG_01873	COG0702	epimerase
MFABIIPG_01880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MFABIIPG_01882	COG0339	signal peptide processing
MFABIIPG_01887	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MFABIIPG_01891	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
MFABIIPG_01892	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
MFABIIPG_01898	COG0776	regulation of translation
MFABIIPG_01902	COG0590	tRNA wobble adenosine to inosine editing
MFABIIPG_01911	COG0084	hydrolase, TatD family'
MFABIIPG_01915	COG1663	tetraacyldisaccharide 4'-kinase activity
MFABIIPG_01916	COG1132	(ABC) transporter
MFABIIPG_01918	COG0811	peptide transport
MFABIIPG_01919	COG1475	DNA binding
MFABIIPG_01920	COG1192	Involved in chromosome partitioning
MFABIIPG_01922	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
MFABIIPG_01925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MFABIIPG_01926	COG0191	fructose-bisphosphate aldolase activity
MFABIIPG_01930	COG0424	maF-like protein
MFABIIPG_01931	COG2850	peptidyl-arginine hydroxylation
MFABIIPG_01933	COG0640	Transcriptional regulator
MFABIIPG_01935	COG3619	membrane
MFABIIPG_01936	COG3122	Protein conserved in bacteria
MFABIIPG_01937	COG1132	(ABC) transporter
MFABIIPG_01941	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MFABIIPG_01942	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MFABIIPG_01944	COG0506	proline dehydrogenase activity
MFABIIPG_01944	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
MFABIIPG_01944	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
MFABIIPG_01945	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MFABIIPG_01948	COG3698	Phosphodiester glycosidase
MFABIIPG_01950	COG2353	YceI-like domain
MFABIIPG_01952	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MFABIIPG_01961	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
MFABIIPG_01961	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MFABIIPG_01966	COG3539	Fimbrial protein
MFABIIPG_01967	COG3121	Chaperone
MFABIIPG_01972	COG0697	spore germination
MFABIIPG_01974	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
MFABIIPG_01976	COG0583	DNA-binding transcription factor activity
MFABIIPG_01981	COG1309	transcriptional regulator
MFABIIPG_01984	COG1522	sequence-specific DNA binding
MFABIIPG_01986	COG1126	abc transporter atp-binding protein
MFABIIPG_01987	COG0765	amino acid transport
MFABIIPG_01988	COG0765	amino acid transport
MFABIIPG_01994	COG1464	Belongs to the NlpA lipoprotein family
MFABIIPG_01996	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MFABIIPG_01997	COG2011	ABC-type metal ion transport system permease component
MFABIIPG_01998	COG0012	GTP binding
MFABIIPG_02003	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MFABIIPG_02011	COG0386	Belongs to the glutathione peroxidase family
MFABIIPG_02013	COG0436	Aminotransferase
MFABIIPG_02014	COG1301	dicarboxylic acid transport
MFABIIPG_02021	COG3634	alkyl hydroperoxide reductase activity
MFABIIPG_02024	COG0583	DNA-binding transcription factor activity
MFABIIPG_02025	COG0798	PFAM Bile acid sodium symporter
MFABIIPG_02026	COG0640	Transcriptional regulator
MFABIIPG_02029	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
MFABIIPG_02031	COG0583	DNA-binding transcription factor activity
MFABIIPG_02033	COG1953	Uracil, thiamine, allantoin
MFABIIPG_02035	COG2175	clavaminate synthase activity
MFABIIPG_02036	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MFABIIPG_02037	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
MFABIIPG_02038	COG4521	taurine ABC transporter
MFABIIPG_02040	COG0477	Major facilitator Superfamily
MFABIIPG_02044	COG1271	oxidase subunit
MFABIIPG_02045	COG1294	oxidase, subunit
MFABIIPG_02047	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MFABIIPG_02051	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
MFABIIPG_02055	COG3052	prosthetic group binding
MFABIIPG_02056	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
MFABIIPG_02058	COG2814	Major facilitator Superfamily
MFABIIPG_02061	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MFABIIPG_02062	COG1346	cytolysis
MFABIIPG_02064	COG0583	DNA-binding transcription factor activity
MFABIIPG_02065	COG0625	glutathione transferase activity
MFABIIPG_02066	COG0625	glutathione transferase activity
MFABIIPG_02067	COG0583	DNA-binding transcription factor activity
MFABIIPG_02070	COG1045	serine acetyltransferase
MFABIIPG_02071	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MFABIIPG_02072	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MFABIIPG_02073	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_02075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MFABIIPG_02076	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MFABIIPG_02077	COG1126	abc transporter atp-binding protein
MFABIIPG_02078	COG0765	amino acid transport
MFABIIPG_02079	COG0765	amino acid transport
MFABIIPG_02082	COG2205	protein histidine kinase activity
MFABIIPG_02082	COG0784	Response regulator, receiver
MFABIIPG_02090	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02101	COG0583	DNA-binding transcription factor activity
MFABIIPG_02105	COG0318	PFAM AMP-dependent synthetase and ligase
MFABIIPG_02106	COG1309	transcriptional regulator
MFABIIPG_02107	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02108	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MFABIIPG_02109	COG1024	Enoyl-CoA hydratase
MFABIIPG_02110	COG4770	biotin carboxylase activity
MFABIIPG_02112	COG0583	DNA-binding transcription factor activity
MFABIIPG_02115	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02117	COG2814	Major facilitator Superfamily
MFABIIPG_02119	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MFABIIPG_02120	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MFABIIPG_02121	COG2814	Major facilitator Superfamily
MFABIIPG_02122	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02123	COG1024	Enoyl-CoA hydratase
MFABIIPG_02124	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02125	COG1250	3-hydroxyacyl-CoA dehydrogenase
MFABIIPG_02126	COG0183	Belongs to the thiolase family
MFABIIPG_02128	COG2814	Major facilitator Superfamily
MFABIIPG_02130	COG1024	Enoyl-CoA hydratase
MFABIIPG_02132	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MFABIIPG_02133	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02134	COG2814	Major facilitator Superfamily
MFABIIPG_02135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MFABIIPG_02136	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MFABIIPG_02139	COG3842	ATPase activity
MFABIIPG_02140	COG1840	ABC-type Fe3 transport system, periplasmic component
MFABIIPG_02142	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MFABIIPG_02143	COG1414	Transcriptional regulator
MFABIIPG_02145	COG0583	DNA-binding transcription factor activity
MFABIIPG_02146	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MFABIIPG_02147	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02149	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
MFABIIPG_02150	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02151	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MFABIIPG_02152	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_02153	COG2267	carboxylic ester hydrolase activity
MFABIIPG_02157	COG3038	cytochrome b561
MFABIIPG_02158	COG0753	catalase activity
MFABIIPG_02159	COG2271	Major facilitator Superfamily
MFABIIPG_02160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MFABIIPG_02161	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MFABIIPG_02167	COG1278	Cold shock
MFABIIPG_02173	COG0210	DNA helicase
MFABIIPG_02174	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MFABIIPG_02175	COG2050	protein possibly involved in aromatic compounds catabolism
MFABIIPG_02177	COG3327	negative regulation of DNA-templated transcription, initiation
MFABIIPG_02178	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
MFABIIPG_02179	COG0183	Belongs to the thiolase family
MFABIIPG_02180	COG1250	3-hydroxyacyl-CoA dehydrogenase
MFABIIPG_02181	COG1024	Enoyl-CoA hydratase
MFABIIPG_02182	COG1024	Enoyl-CoA hydratase
MFABIIPG_02183	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MFABIIPG_02184	COG2151	metal-sulfur cluster biosynthetic enzyme
MFABIIPG_02185	COG3396	Phenylacetate-CoA oxygenase
MFABIIPG_02186	COG3460	Phenylacetate-CoA oxygenase
MFABIIPG_02187	COG3396	Phenylacetate-CoA oxygenase
MFABIIPG_02188	COG2030	dehydratase
MFABIIPG_02188	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02189	COG1760	l-serine dehydratase
MFABIIPG_02190	COG0531	amino acid
MFABIIPG_02191	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02196	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MFABIIPG_02200	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MFABIIPG_02203	COG0789	Transcriptional regulator
MFABIIPG_02205	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MFABIIPG_02208	COG2807	transmembrane transport
MFABIIPG_02209	COG0590	tRNA wobble adenosine to inosine editing
MFABIIPG_02232	COG1116	anion transmembrane transporter activity
MFABIIPG_02233	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MFABIIPG_02235	COG0864	Transcriptional regulator
MFABIIPG_02237	COG1733	regulation of RNA biosynthetic process
MFABIIPG_02238	COG2249	NAD(P)H dehydrogenase (quinone) activity
MFABIIPG_02239	COG0439	Biotin carboxylase
MFABIIPG_02242	COG1063	alcohol dehydrogenase
MFABIIPG_02244	COG1309	transcriptional regulator
MFABIIPG_02249	COG0038	chloride channel
MFABIIPG_02250	COG4770	biotin carboxylase activity
MFABIIPG_02254	COG1914	H( )-stimulated, divalent metal cation uptake system
MFABIIPG_02255	COG0583	DNA-binding transcription factor activity
MFABIIPG_02259	COG3209	COG3209 Rhs family protein
MFABIIPG_02267	COG1250	3-hydroxyacyl-CoA dehydrogenase
MFABIIPG_02271	COG2814	Major facilitator Superfamily
MFABIIPG_02273	COG1560	Kdo2-lipid A biosynthetic process
MFABIIPG_02276	COG5006	permease, DMT superfamily
MFABIIPG_02277	COG1522	sequence-specific DNA binding
MFABIIPG_02280	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
MFABIIPG_02282	COG4122	O-methyltransferase activity
MFABIIPG_02288	COG1538	Outer membrane efflux protein
MFABIIPG_02289	COG1137	ATPase activity
MFABIIPG_02290	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
MFABIIPG_02292	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
MFABIIPG_02305	COG5434	Belongs to the glycosyl hydrolase 28 family
MFABIIPG_02309	COG3566	protein conserved in bacteria
MFABIIPG_02313	COG3567	Phage-associated protein, HI1409 family
MFABIIPG_02314	COG5410	chromosome segregation
MFABIIPG_02327	COG2814	Major facilitator Superfamily
MFABIIPG_02334	COG1278	Cold shock
MFABIIPG_02335	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_02342	COG1570	exodeoxyribonuclease VII activity
MFABIIPG_02352	COG0583	DNA-binding transcription factor activity
MFABIIPG_02353	COG4638	Rieske (2fe-2S)
MFABIIPG_02354	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
MFABIIPG_02355	COG0543	2 iron, 2 sulfur cluster binding
MFABIIPG_02355	COG0633	Ferredoxin
MFABIIPG_02356	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02357	COG3135	benzoate transporter
MFABIIPG_02358	COG2814	Major facilitator Superfamily
MFABIIPG_02359	COG2814	Major facilitator Superfamily
MFABIIPG_02362	COG1643	Atp-dependent helicase
MFABIIPG_02363	COG0450	alkyl hydroperoxide reductase
MFABIIPG_02365	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
MFABIIPG_02367	COG3634	alkyl hydroperoxide reductase activity
MFABIIPG_02371	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MFABIIPG_02372	COG0625	glutathione transferase activity
MFABIIPG_02374	COG2885	chlorophyll binding
MFABIIPG_02381	COG0542	response to heat
MFABIIPG_02384	COG1765	OsmC-like protein
MFABIIPG_02386	COG0667	Aldo Keto reductase
MFABIIPG_02389	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MFABIIPG_02391	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MFABIIPG_02393	COG0527	aspartate kinase activity
MFABIIPG_02395	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MFABIIPG_02397	COG3038	cytochrome b561
MFABIIPG_02398	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
MFABIIPG_02399	COG2252	PERMEase
MFABIIPG_02401	COG2072	flavoprotein involved in K transport
MFABIIPG_02404	COG1741	Belongs to the pirin family
MFABIIPG_02405	COG1309	transcriptional regulator
MFABIIPG_02407	COG0300	oxidoreductase activity
MFABIIPG_02408	COG2072	flavoprotein involved in K transport
MFABIIPG_02409	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MFABIIPG_02418	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MFABIIPG_02421	COG2814	Major facilitator Superfamily
MFABIIPG_02422	COG1024	Enoyl-CoA hydratase
MFABIIPG_02423	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02425	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02430	COG2186	Transcriptional regulator
MFABIIPG_02431	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02433	COG4948	Mandelate Racemase Muconate Lactonizing
MFABIIPG_02434	COG2271	Major facilitator Superfamily
MFABIIPG_02435	COG2721	sulfolactate sulfo-lyase activity
MFABIIPG_02436	COG0697	spore germination
MFABIIPG_02442	COG1113	amino acid transport
MFABIIPG_02446	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02450	COG0531	amino acid
MFABIIPG_02452	COG1113	amino acid transport
MFABIIPG_02460	COG3209	COG3209 Rhs family protein
MFABIIPG_02466	COG1902	pentaerythritol trinitrate reductase activity
MFABIIPG_02466	COG0446	pyridine nucleotide-disulphide oxidoreductase
MFABIIPG_02468	COG2203	Gaf domain
MFABIIPG_02468	COG3706	GGDEF domain
MFABIIPG_02468	COG4251	negative regulation of phosphorylation
MFABIIPG_02468	COG5001	Diguanylate cyclase
MFABIIPG_02470	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MFABIIPG_02480	COG4172	Belongs to the ABC transporter superfamily
MFABIIPG_02481	COG4239	(ABC) transporter, permease
MFABIIPG_02482	COG4174	ABC transporter (Permease)
MFABIIPG_02484	COG0741	lytic transglycosylase activity
MFABIIPG_02484	COG1388	LysM domain
MFABIIPG_02484	COG1388	LysM domain
MFABIIPG_02484	COG0741	lytic transglycosylase activity
MFABIIPG_02485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MFABIIPG_02493	COG0583	DNA-binding transcription factor activity
MFABIIPG_02494	COG1279	arginine transmembrane transporter activity
MFABIIPG_02498	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MFABIIPG_02499	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MFABIIPG_02500	COG0006	proline dipeptidase activity
MFABIIPG_02507	COG2194	sulfuric ester hydrolase activity
MFABIIPG_02518	COG0739	heme binding
MFABIIPG_02524	COG1598	PFAM Uncharacterised protein family UPF0150
MFABIIPG_02579	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MFABIIPG_02584	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MFABIIPG_02585	COG2878	Part of a membrane complex involved in electron transport
MFABIIPG_02586	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MFABIIPG_02590	COG0768	penicillin binding
MFABIIPG_02591	COG0742	ribosomal rna small subunit methyltransferase
MFABIIPG_02594	COG0830	nickel cation binding
MFABIIPG_02596	COG0804	urea catabolic process
MFABIIPG_02604	COG1253	flavin adenine dinucleotide binding
MFABIIPG_02605	COG2851	Citrate transporter
MFABIIPG_02615	COG1773	rubredoxin
MFABIIPG_02616	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MFABIIPG_02618	COG0583	DNA-binding transcription factor activity
MFABIIPG_02623	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
MFABIIPG_02624	COG4181	ATPase activity
MFABIIPG_02633	COG1262	PFAM Formylglycine-generating sulfatase enzyme
MFABIIPG_02637	COG0306	phosphate transporter
MFABIIPG_02639	COG3958	Transketolase
MFABIIPG_02640	COG3959	Transketolase, thiamine diphosphate binding domain
MFABIIPG_02641	COG2271	Major facilitator Superfamily
MFABIIPG_02642	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02643	COG0583	DNA-binding transcription factor activity
MFABIIPG_02646	COG2223	nitrite transmembrane transporter activity
MFABIIPG_02647	COG2207	Transcriptional regulator
MFABIIPG_02648	COG2066	Belongs to the glutaminase family
MFABIIPG_02649	COG0242	peptide deformylase activity
MFABIIPG_02650	COG0477	Major facilitator Superfamily
MFABIIPG_02652	COG0028	Belongs to the TPP enzyme family
MFABIIPG_02655	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02656	COG2267	carboxylic ester hydrolase activity
MFABIIPG_02658	COG2271	Major facilitator Superfamily
MFABIIPG_02659	COG0446	pyridine nucleotide-disulphide oxidoreductase
MFABIIPG_02661	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_02665	COG1414	Transcriptional regulator
MFABIIPG_02668	COG1024	Enoyl-CoA hydratase
MFABIIPG_02670	COG1215	transferase activity, transferring glycosyl groups
MFABIIPG_02671	COG0726	polysaccharide deacetylase
MFABIIPG_02671	COG1649	PFAM Uncharacterised BCR, COG1649
MFABIIPG_02673	COG4681	YaeQ
MFABIIPG_02675	COG0523	cobalamin synthesis protein
MFABIIPG_02677	COG1607	acyl-coa hydrolase
MFABIIPG_02679	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MFABIIPG_02680	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MFABIIPG_02681	COG1309	transcriptional regulator
MFABIIPG_02686	COG2040	homocysteine
MFABIIPG_02687	COG0531	amino acid
MFABIIPG_02692	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MFABIIPG_02693	COG0477	Major facilitator Superfamily
MFABIIPG_02698	COG0084	hydrolase, TatD family'
MFABIIPG_02704	COG0405	Gamma-glutamyltransferase
MFABIIPG_02705	COG2814	Major facilitator Superfamily
MFABIIPG_02707	COG2050	protein possibly involved in aromatic compounds catabolism
MFABIIPG_02710	COG1090	epimerase
MFABIIPG_02714	COG0420	3'-5' exonuclease activity
MFABIIPG_02719	COG0735	belongs to the Fur family
MFABIIPG_02720	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MFABIIPG_02724	COG0121	glutamine amidotransferase
MFABIIPG_02727	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MFABIIPG_02729	COG0210	DNA helicase
MFABIIPG_02730	COG2885	chlorophyll binding
MFABIIPG_02731	COG0204	Acyl-transferase
MFABIIPG_02734	COG2894	cell division
MFABIIPG_02737	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_02738	COG1674	ftsk spoiiie
MFABIIPG_02738	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MFABIIPG_02739	COG0492	ferredoxin-NADP+ reductase activity
MFABIIPG_02740	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
MFABIIPG_02742	COG0456	acetyltransferase
MFABIIPG_02751	COG1981	membrane
MFABIIPG_02754	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MFABIIPG_02754	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MFABIIPG_02758	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_02760	COG0657	acetylesterase activity
MFABIIPG_02762	COG0473	3-isopropylmalate dehydrogenase activity
MFABIIPG_02763	COG0583	DNA-binding transcription factor activity
MFABIIPG_02766	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
MFABIIPG_02771	COG0564	pseudouridine synthase activity
MFABIIPG_02773	COG0358	DNA primase activity
MFABIIPG_02776	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
MFABIIPG_02781	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MFABIIPG_02787	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MFABIIPG_02789	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MFABIIPG_02789	COG0352	thiamine-phosphate diphosphorylase activity
MFABIIPG_02789	COG0351	phosphomethylpyrimidine kinase
MFABIIPG_02790	COG1652	LysM domain
MFABIIPG_02795	COG1399	metal-binding, possibly nucleic acid-binding protein
MFABIIPG_02796	COG3101	peptidyl-lysine hydroxylation
MFABIIPG_02797	COG0009	L-threonylcarbamoyladenylate synthase
MFABIIPG_02798	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MFABIIPG_02799	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MFABIIPG_02802	COG4106	trans-aconitate 2-methyltransferase activity
MFABIIPG_02805	COG0596	Alpha beta hydrolase
MFABIIPG_02805	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MFABIIPG_02805	COG2226	methyltransferase
MFABIIPG_02806	COG1877	trehalose-phosphatase activity
MFABIIPG_02807	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
MFABIIPG_02808	COG2223	nitrite transmembrane transporter activity
MFABIIPG_02812	COG1196	nuclear chromosome segregation
MFABIIPG_02814	COG0730	response to heat
MFABIIPG_02817	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MFABIIPG_02819	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MFABIIPG_02829	COG0489	protein tyrosine kinase activity
MFABIIPG_02831	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MFABIIPG_02831	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MFABIIPG_02837	COG2515	1-aminocyclopropane-1-carboxylate deaminase
MFABIIPG_02838	COG2081	HI0933 family
MFABIIPG_02840	COG0668	transmembrane transport
MFABIIPG_02844	COG0583	DNA-binding transcription factor activity
MFABIIPG_02849	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
MFABIIPG_02850	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MFABIIPG_02856	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
MFABIIPG_02864	COG0745	RESPONSE REGULATOR receiver
MFABIIPG_02867	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MFABIIPG_02869	COG0384	phenazine biosynthesis protein PhzF
MFABIIPG_02875	COG1309	transcriptional regulator
MFABIIPG_02876	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MFABIIPG_02879	COG0583	DNA-binding transcription factor activity
MFABIIPG_02885	COG0583	DNA-binding transcription factor activity
MFABIIPG_02888	COG0583	DNA-binding transcription factor activity
MFABIIPG_02889	COG1053	succinate dehydrogenase
MFABIIPG_02891	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MFABIIPG_02892	COG2814	Major facilitator Superfamily
MFABIIPG_02893	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_02894	COG0583	DNA-binding transcription factor activity
MFABIIPG_02895	COG1063	alcohol dehydrogenase
MFABIIPG_02901	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MFABIIPG_02902	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MFABIIPG_02903	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MFABIIPG_02906	COG3667	copper resistance
MFABIIPG_02907	COG2132	Multicopper oxidase
MFABIIPG_02909	COG0561	phosphatase activity
MFABIIPG_02910	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MFABIIPG_02912	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MFABIIPG_02915	COG1214	PFAM Peptidase M22, glycoprotease
MFABIIPG_02925	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MFABIIPG_02927	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MFABIIPG_02928	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MFABIIPG_02929	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MFABIIPG_02941	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MFABIIPG_02943	COG1846	Transcriptional regulator
MFABIIPG_02944	COG1764	response to oxidative stress
MFABIIPG_02952	COG0037	tRNA processing
MFABIIPG_02954	COG0248	Ppx GppA phosphatase
MFABIIPG_02959	COG0072	phenylalanine-tRNA ligase activity
MFABIIPG_02966	COG1238	metal cluster binding
MFABIIPG_02967	COG0625	glutathione transferase activity
MFABIIPG_02970	COG0318	PFAM AMP-dependent synthetase and ligase
MFABIIPG_02971	COG3028	Belongs to the UPF0307 family
MFABIIPG_02972	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
MFABIIPG_02976	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MFABIIPG_02977	COG0617	tRNA 3'-terminal CCA addition
MFABIIPG_02978	COG1555	photosystem II stabilization
MFABIIPG_02979	COG3956	TIGRFAM MazG family protein
MFABIIPG_02981	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MFABIIPG_02985	COG2205	protein histidine kinase activity
MFABIIPG_02985	COG5002	protein histidine kinase activity
MFABIIPG_02985	COG0784	Response regulator, receiver
MFABIIPG_02986	COG1024	Enoyl-CoA hydratase
MFABIIPG_02987	COG2084	Dehydrogenase
MFABIIPG_02988	COG3622	Belongs to the hyi family
MFABIIPG_02994	COG0697	spore germination
MFABIIPG_02996	COG2814	Major facilitator Superfamily
MFABIIPG_02997	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MFABIIPG_02999	COG0583	DNA-binding transcription factor activity
MFABIIPG_03000	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MFABIIPG_03002	COG0084	hydrolase, TatD family'
MFABIIPG_03005	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MFABIIPG_03011	COG0440	acetolactate synthase activity
MFABIIPG_03012	COG0028	Belongs to the TPP enzyme family
MFABIIPG_03017	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MFABIIPG_03018	COG0577	efflux transmembrane transporter activity
MFABIIPG_03018	COG1136	(ABC) transporter
MFABIIPG_03019	COG1538	Outer membrane efflux protein
MFABIIPG_03022	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
MFABIIPG_03023	COG1162	GTPase activity
MFABIIPG_03025	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
MFABIIPG_03033	COG1426	Protein conserved in bacteria
MFABIIPG_03040	COG0793	Belongs to the peptidase S41A family
MFABIIPG_03043	COG2267	carboxylic ester hydrolase activity
MFABIIPG_03045	COG1012	belongs to the aldehyde dehydrogenase family
MFABIIPG_03046	COG3265	gluconokinase activity
MFABIIPG_03048	COG0800	Aldolase
MFABIIPG_03050	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MFABIIPG_03051	COG0280	phosphate acetyltransferase
MFABIIPG_03051	COG0857	belongs to the CobB CobQ family
MFABIIPG_03052	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
MFABIIPG_03052	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
MFABIIPG_03056	COG0740	serine-type endopeptidase activity
MFABIIPG_03058	COG4774	siderophore transport
MFABIIPG_03060	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MFABIIPG_03062	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MFABIIPG_03062	COG2813	Specifically methylates the guanine in position
MFABIIPG_03082	COG0788	formyltetrahydrofolate deformylase activity
MFABIIPG_03087	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MFABIIPG_03087	COG4651	solute:proton antiporter activity
MFABIIPG_03091	COG0724	RNA recognition motif
MFABIIPG_03092	COG0210	DNA helicase
MFABIIPG_03097	COG1733	regulation of RNA biosynthetic process
MFABIIPG_03099	COG2900	Belongs to the SlyX family
MFABIIPG_03100	COG0488	(ABC) transporter
MFABIIPG_03101	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_03102	COG1560	Kdo2-lipid A biosynthetic process
MFABIIPG_03104	COG1301	dicarboxylic acid transport
MFABIIPG_03115	COG0473	3-isopropylmalate dehydrogenase activity
MFABIIPG_03126	COG0583	DNA-binding transcription factor activity
MFABIIPG_03128	COG0625	glutathione transferase activity
MFABIIPG_03129	COG2378	regulation of single-species biofilm formation
MFABIIPG_03130	COG0546	phosphoglycolate phosphatase activity
MFABIIPG_03132	COG1530	ribonuclease E activity
MFABIIPG_03133	COG0318	PFAM AMP-dependent synthetase and ligase
MFABIIPG_03136	COG0583	DNA-binding transcription factor activity
MFABIIPG_03137	COG4221	oxidoreductase activity
MFABIIPG_03138	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MFABIIPG_03140	COG0534	Mate efflux family protein
MFABIIPG_03143	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MFABIIPG_03148	COG0493	'glutamate synthase
MFABIIPG_03148	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
MFABIIPG_03150	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
MFABIIPG_03151	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MFABIIPG_03154	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MFABIIPG_03156	COG0644	oxidoreductase
MFABIIPG_03156	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
MFABIIPG_03158	COG0425	Belongs to the sulfur carrier protein TusA family
MFABIIPG_03159	COG4535	Mg2 and Co2 transporter CorC
MFABIIPG_03161	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MFABIIPG_03165	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MFABIIPG_03166	COG0475	glutathione-regulated potassium exporter activity
MFABIIPG_03166	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MFABIIPG_03169	COG0484	heat shock protein binding
MFABIIPG_03170	COG0789	Transcriptional regulator
MFABIIPG_03171	COG0598	Magnesium transport protein CorA
MFABIIPG_03174	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MFABIIPG_03175	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MFABIIPG_03176	COG1074	ATP-dependent DNA helicase activity
MFABIIPG_03177	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
MFABIIPG_03181	COG2226	methyltransferase
MFABIIPG_03184	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MFABIIPG_03185	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MFABIIPG_03188	COG2111	Na H antiporter
MFABIIPG_03188	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MFABIIPG_03189	COG1006	Multisubunit Na H antiporter MnhC subunit
MFABIIPG_03190	COG0651	ATP synthesis coupled electron transport
MFABIIPG_03191	COG1863	multisubunit Na H antiporter MnhE subunit
MFABIIPG_03192	COG2212	antiporter activity
MFABIIPG_03193	COG1320	monovalent cation:proton antiporter activity
MFABIIPG_03196	COG0195	Participates in both transcription termination and antitermination
MFABIIPG_03206	COG0237	dephospho-CoA kinase activity
MFABIIPG_03208	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MFABIIPG_03211	COG0497	DNA recombination
MFABIIPG_03213	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MFABIIPG_03219	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MFABIIPG_03219	COG2169	Transcriptional regulator
MFABIIPG_03220	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MFABIIPG_03232	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MFABIIPG_03235	COG0326	Molecular chaperone. Has ATPase activity
MFABIIPG_03238	COG2056	Na+-H+ antiporter family
MFABIIPG_03258	COG0546	phosphoglycolate phosphatase activity
MFABIIPG_03259	COG1716	ATPase activity
MFABIIPG_03268	COG0181	hydroxymethylbilane synthase activity
MFABIIPG_03270	COG3275	phosphorelay sensor kinase activity
MFABIIPG_03274	COG1538	Outer membrane efflux protein
MFABIIPG_03275	COG0697	spore germination
MFABIIPG_03280	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MFABIIPG_03281	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MFABIIPG_03282	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MFABIIPG_03283	COG0772	Belongs to the SEDS family
MFABIIPG_03288	COG4974	Belongs to the 'phage' integrase family
MFABIIPG_03289	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MFABIIPG_03291	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MFABIIPG_03293	COG2197	response regulator
MFABIIPG_03296	COG0793	Belongs to the peptidase S41A family
MFABIIPG_03297	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MFABIIPG_03298	COG0795	lipopolysaccharide-transporting ATPase activity
MFABIIPG_03306	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MFABIIPG_03306	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MFABIIPG_03308	COG0004	ammonium transporteR
MFABIIPG_03309	COG0347	Belongs to the P(II) protein family
MFABIIPG_03311	COG0606	chelatase, subunit chli
MFABIIPG_03312	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MFABIIPG_03314	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MFABIIPG_03317	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
MFABIIPG_03320	COG0318	PFAM AMP-dependent synthetase and ligase
MFABIIPG_03322	COG0477	Major facilitator Superfamily
MFABIIPG_03323	COG2860	membrane
MFABIIPG_03324	COG3012	SEC-C Motif Domain Protein
MFABIIPG_03325	COG1253	flavin adenine dinucleotide binding
MFABIIPG_03327	COG2814	Major facilitator Superfamily
MFABIIPG_03329	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MFABIIPG_03336	COG0655	NAD(P)H dehydrogenase (quinone) activity
MFABIIPG_03338	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MFABIIPG_03345	COG1309	transcriptional regulator
MFABIIPG_03352	COG0758	DNA mediated transformation
MFABIIPG_03354	COG0697	spore germination
MFABIIPG_03355	COG1309	transcriptional regulator
MFABIIPG_03358	COG0386	Belongs to the glutathione peroxidase family
MFABIIPG_03371	COG1121	(ABC) transporter
MFABIIPG_03372	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MFABIIPG_03373	COG1280	lysine exporter protein (LysE YggA)
MFABIIPG_03374	COG2837	iron assimilation
MFABIIPG_03375	COG0281	malic enzyme
MFABIIPG_03384	COG0519	Catalyzes the synthesis of GMP from XMP
MFABIIPG_03384	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MFABIIPG_03385	COG4399	Belongs to the UPF0754 family
MFABIIPG_03386	COG2259	Doxx family
MFABIIPG_03387	COG0586	Pfam SNARE associated Golgi protein
MFABIIPG_03390	COG1192	Involved in chromosome partitioning
MFABIIPG_03392	COG0271	Belongs to the BolA IbaG family
MFABIIPG_03396	COG2267	carboxylic ester hydrolase activity
MFABIIPG_03400	COG3321	synthase
MFABIIPG_03400	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
MFABIIPG_03400	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MFABIIPG_03400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MFABIIPG_03401	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_03403	COG2197	response regulator
MFABIIPG_03405	COG3916	Acyl-homoserine-lactone synthase
MFABIIPG_03406	COG0477	Major facilitator Superfamily
MFABIIPG_03407	COG1024	Enoyl-CoA hydratase
MFABIIPG_03408	COG1024	Enoyl-CoA hydratase
MFABIIPG_03409	COG1960	acyl-CoA dehydrogenase activity
MFABIIPG_03410	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MFABIIPG_03414	COG1113	amino acid transport
MFABIIPG_03415	COG1113	amino acid transport
MFABIIPG_03416	COG0251	oxidation-reduction process
MFABIIPG_03424	COG0564	pseudouridine synthase activity
MFABIIPG_03428	COG1051	belongs to the nudix hydrolase family
MFABIIPG_03432	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MFABIIPG_03435	COG1802	Transcriptional regulator
MFABIIPG_03436	COG1448	Aminotransferase
MFABIIPG_03437	COG0277	FAD linked oxidase domain protein
MFABIIPG_03439	COG2186	Transcriptional regulator
MFABIIPG_03441	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MFABIIPG_03444	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MFABIIPG_03446	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MFABIIPG_03448	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MFABIIPG_03449	COG0438	transferase activity, transferring glycosyl groups
MFABIIPG_03452	COG0438	transferase activity, transferring glycosyl groups
MFABIIPG_03455	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
MFABIIPG_03461	COG0728	peptidoglycan biosynthetic process
MFABIIPG_03462	COG3023	N-Acetylmuramoyl-L-alanine amidase
MFABIIPG_03473	COG0546	phosphoglycolate phosphatase activity
MFABIIPG_03474	COG1028	Short-chain dehydrogenase reductase Sdr
MFABIIPG_03478	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MFABIIPG_03479	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MFABIIPG_03480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MFABIIPG_03481	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MFABIIPG_03482	COG1116	anion transmembrane transporter activity
MFABIIPG_03483	COG1309	transcriptional regulator
MFABIIPG_03484	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MFABIIPG_03486	COG0196	riboflavin kinase activity
MFABIIPG_03487	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MFABIIPG_03489	COG1047	Peptidyl-prolyl cis-trans
MFABIIPG_03497	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MFABIIPG_03498	COG0657	acetylesterase activity
MFABIIPG_03502	COG0583	DNA-binding transcription factor activity
MFABIIPG_03508	COG2951	lytic endotransglycosylase activity
MFABIIPG_03510	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MFABIIPG_03513	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MFABIIPG_03515	COG0671	phosphoesterase, PA-phosphatase related
MFABIIPG_03516	COG0861	Integral membrane protein TerC family
MFABIIPG_03518	COG0754	glutathionylspermidine amidase activity
MFABIIPG_03520	COG0402	S-adenosylhomocysteine deaminase activity
MFABIIPG_03524	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MFABIIPG_03525	COG1230	cation diffusion facilitator family transporter
MFABIIPG_03528	COG0706	membrane insertase activity