locus-tag class description GWK28_00005 PF08299 Bacterial dnaA protein helix-turn-helix GWK28_00005 PF00308 Bacterial dnaA protein GWK28_00005 PF11638 DnaA N-terminal domain GWK28_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GWK28_00010 PF02767 DNA polymerase III beta subunit, central domain GWK28_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GWK28_00015 PF02463 RecF/RecN/SMC N terminal domain GWK28_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_00020 PF18053 DNA gyrase B subunit insert domain GWK28_00020 PF00986 DNA gyrase B subunit, carboxyl terminus GWK28_00020 PF00204 DNA gyrase B GWK28_00020 PF01751 Toprim domain GWK28_00030 PF09335 SNARE associated Golgi protein GWK28_00035 PF00005 ABC transporter GWK28_00035 PF12848 ABC transporter GWK28_00055 PF01521 Iron-sulphur cluster biosynthesis GWK28_00060 PF00561 alpha/beta hydrolase fold GWK28_00065 PF03702 Anhydro-N-acetylmuramic acid kinase GWK28_00070 PF00579 tRNA synthetases class I (W and Y) GWK28_00110 PF00209 Sodium:neurotransmitter symporter family GWK28_00120 PF01029 NusB family GWK28_00120 PF01189 16S rRNA methyltransferase RsmB/F GWK28_00125 PF00551 Formyl transferase GWK28_00125 PF02911 Formyl transferase, C-terminal domain GWK28_00130 PF00920 Dehydratase family GWK28_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_00145 PF03466 LysR substrate binding domain GWK28_00150 PF00860 Permease family GWK28_00155 PF00311 Phosphoenolpyruvate carboxylase GWK28_00160 PF00440 Bacterial regulatory proteins, tetR family GWK28_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region GWK28_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_00170 PF00873 AcrB/AcrD/AcrF family GWK28_00180 PF00684 DnaJ central domain GWK28_00180 PF01556 DnaJ C terminal domain GWK28_00180 PF00226 DnaJ domain GWK28_00190 PF01113 Dihydrodipicolinate reductase, N-terminus GWK28_00190 PF05173 Dihydrodipicolinate reductase, C-terminus GWK28_00200 PF07690 Major Facilitator Superfamily GWK28_00205 PF00248 Aldo/keto reductase family GWK28_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_00210 PF03466 LysR substrate binding domain GWK28_00225 PF00392 Bacterial regulatory proteins, gntR family GWK28_00225 PF00155 Aminotransferase class I and II GWK28_00230 PF00107 Zinc-binding dehydrogenase GWK28_00230 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_00235 PF03352 Methyladenine glycosylase GWK28_00250 PF10576 Iron-sulfur binding domain of endonuclease III GWK28_00250 PF00633 Helix-hairpin-helix motif GWK28_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein GWK28_00250 PF14815 NUDIX domain GWK28_00265 PF07043 Protein of unknown function (DUF1328) GWK28_00270 PF03692 Putative zinc- or iron-chelating domain GWK28_00275 PF07995 Glucose / Sorbosone dehydrogenase GWK28_00280 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_00280 PF12002 MgsA AAA+ ATPase C terminal GWK28_00280 PF16193 AAA C-terminal domain GWK28_00285 PF01226 Formate/nitrite transporter GWK28_00295 PF01259 SAICAR synthetase GWK28_00305 PF00701 Dihydrodipicolinate synthetase family GWK28_00310 PF00857 Isochorismatase family GWK28_00315 PF01758 Sodium Bile acid symporter family GWK28_00320 PF01554 MatE GWK28_00325 PF04463 Protein of unknown function (DUF523) GWK28_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GWK28_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GWK28_00345 PF14497 Glutathione S-transferase, C-terminal domain GWK28_00345 PF02798 Glutathione S-transferase, N-terminal domain GWK28_00355 PF00324 Amino acid permease GWK28_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain GWK28_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain GWK28_00375 PF00392 Bacterial regulatory proteins, gntR family GWK28_00375 PF07702 UTRA domain GWK28_00380 PF05962 HutD GWK28_00385 PF01175 Urocanase Rossmann-like domain GWK28_00385 PF17392 Urocanase C-terminal domain GWK28_00385 PF17391 Urocanase N-terminal domain GWK28_00390 PF00221 Aromatic amino acid lyase GWK28_00395 PF00324 Amino acid permease GWK28_00400 PF01979 Amidohydrolase family GWK28_00405 PF00491 Arginase family GWK28_00420 PF01177 Asp/Glu/Hydantoin racemase GWK28_00430 PF01380 SIS domain GWK28_00435 PF14602 Hexapeptide repeat of succinyl-transferase GWK28_00435 PF12804 MobA-like NTP transferase domain GWK28_00435 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_00440 PF04608 Phosphatidylglycerophosphatase A GWK28_00445 PF02769 AIR synthase related protein, C-terminal domain GWK28_00445 PF00586 AIR synthase related protein, N-terminal domain GWK28_00450 PF01029 NusB family GWK28_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase GWK28_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GWK28_00460 PF00925 GTP cyclohydrolase II GWK28_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase GWK28_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GWK28_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GWK28_00495 PF00581 Rhodanese-like domain GWK28_00500 PF02666 Phosphatidylserine decarboxylase GWK28_00510 PF11808 Phosphate regulon sensor protein PhoR GWK28_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_00510 PF00512 His Kinase A (phospho-acceptor) domain GWK28_00510 PF00989 PAS fold GWK28_00515 PF00072 Response regulator receiver domain GWK28_00515 PF00486 Transcriptional regulatory protein, C terminal GWK28_00525 PF00106 short chain dehydrogenase GWK28_00530 PF01554 MatE GWK28_00535 PF00155 Aminotransferase class I and II GWK28_00540 PF04286 Protein of unknown function (DUF445) GWK28_00555 PF04262 Glutamate-cysteine ligase GWK28_00560 PF02600 Disulfide bond formation protein DsbB GWK28_00565 PF04717 Type VI secretion system, phage-baseplate injector GWK28_00565 PF13296 Putative type VI secretion system Rhs element Vgr GWK28_00565 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) GWK28_00570 PF01476 LysM domain GWK28_00570 PF01510 N-acetylmuramoyl-L-alanine amidase GWK28_00570 PF01471 Putative peptidoglycan binding domain GWK28_00620 PF05728 Uncharacterised protein family (UPF0227) GWK28_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_00625 PF00204 DNA gyrase B GWK28_00625 PF00986 DNA gyrase B subunit, carboxyl terminus GWK28_00625 PF01751 Toprim domain GWK28_00630 PF00106 short chain dehydrogenase GWK28_00635 PF04115 Ureidoglycolate lyase GWK28_00640 PF03561 Allantoicase repeat GWK28_00645 PF01494 FAD binding domain GWK28_00655 PF00860 Permease family GWK28_00660 PF00576 HIUase/Transthyretin family GWK28_00690 PF00872 Transposase, Mutator family GWK28_00695 PF11412 Disulphide bond corrector protein DsbC GWK28_00695 PF02683 Cytochrome C biogenesis protein transmembrane region GWK28_00700 PF07694 5TMR of 5TMR-LYT GWK28_00700 PF00990 Diguanylate cyclase, GGDEF domain GWK28_00705 PF07859 alpha/beta hydrolase fold GWK28_00715 PF03960 ArsC family GWK28_00720 PF03372 Endonuclease/Exonuclease/phosphatase family GWK28_00725 PF00156 Phosphoribosyl transferase domain GWK28_00740 PF00593 TonB dependent receptor GWK28_00740 PF07715 TonB-dependent Receptor Plug Domain GWK28_00750 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GWK28_00750 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GWK28_00755 PF03033 Glycosyltransferase family 28 N-terminal domain GWK28_00755 PF04101 Glycosyltransferase family 28 C-terminal domain GWK28_00760 PF01225 Mur ligase family, catalytic domain GWK28_00760 PF08245 Mur ligase middle domain GWK28_00760 PF02875 Mur ligase family, glutamate ligase domain GWK28_00765 PF01820 D-ala D-ala ligase N-terminus GWK28_00765 PF07478 D-ala D-ala ligase C-terminus GWK28_00770 PF08478 POTRA domain, FtsQ-type GWK28_00770 PF03799 Cell division protein FtsQ GWK28_00775 PF02491 SHS2 domain inserted in FTSA GWK28_00780 PF12327 FtsZ family, C-terminal domain GWK28_00780 PF00091 Tubulin/FtsZ family, GTPase domain GWK28_00785 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GWK28_00795 PF01551 Peptidase family M23 GWK28_00800 PF00456 Transketolase, thiamine diphosphate binding domain GWK28_00800 PF17831 Pyruvate dehydrogenase E1 component middle domain GWK28_00805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GWK28_00805 PF02817 e3 binding domain GWK28_00805 PF00364 Biotin-requiring enzyme GWK28_00815 PF01169 Uncharacterized protein family UPF0016 GWK28_00820 PF00593 TonB dependent receptor GWK28_00820 PF07715 TonB-dependent Receptor Plug Domain GWK28_00825 PF00258 Flavodoxin GWK28_00825 PF01613 Flavin reductase like domain GWK28_00830 PF03692 Putative zinc- or iron-chelating domain GWK28_00835 PF00478 IMP dehydrogenase / GMP reductase domain GWK28_00835 PF00571 CBS domain GWK28_00840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GWK28_00840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GWK28_00840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GWK28_00840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GWK28_00845 PF01243 Pyridoxamine 5'-phosphate oxidase GWK28_00845 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GWK28_00850 PF01368 DHH family GWK28_00850 PF02272 DHHA1 domain GWK28_00850 PF17768 RecJ OB domain GWK28_00870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_00875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GWK28_00880 PF04452 RNA methyltransferase GWK28_00885 PF00924 Mechanosensitive ion channel GWK28_00895 PF00501 AMP-binding enzyme GWK28_00895 PF13193 AMP-binding enzyme C-terminal domain GWK28_00895 PF16177 Acetyl-coenzyme A synthetase N-terminus GWK28_00900 PF00857 Isochorismatase family GWK28_00905 PF01037 Lrp/AsnC ligand binding domain GWK28_00910 PF00296 Luciferase-like monooxygenase GWK28_00915 PF03358 NADPH-dependent FMN reductase GWK28_00920 PF00196 Bacterial regulatory proteins, luxR family GWK28_00920 PF00072 Response regulator receiver domain GWK28_00930 PF00512 His Kinase A (phospho-acceptor) domain GWK28_00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_00930 PF00672 HAMP domain GWK28_00930 PF01627 Hpt domain GWK28_00930 PF00072 Response regulator receiver domain GWK28_00935 PF04341 Protein of unknown function, DUF485 GWK28_00940 PF00474 Sodium:solute symporter family GWK28_00950 PF02028 BCCT, betaine/carnitine/choline family transporter GWK28_00960 PF00990 Diguanylate cyclase, GGDEF domain GWK28_00965 PF00005 ABC transporter GWK28_00965 PF17760 UvrA interaction domain GWK28_00965 PF17755 UvrA DNA-binding domain GWK28_00970 PF00440 Bacterial regulatory proteins, tetR family GWK28_00970 PF16925 Tetracyclin repressor-like, C-terminal domain GWK28_00975 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_00975 PF00107 Zinc-binding dehydrogenase GWK28_00985 PF06942 GlpM protein GWK28_00990 PF02581 Thiamine monophosphate synthase GWK28_00990 PF03070 TENA/THI-4/PQQC family GWK28_00990 PF08543 Phosphomethylpyrimidine kinase GWK28_01000 PF07690 Major Facilitator Superfamily GWK28_01005 PF00436 Single-strand binding protein family GWK28_01015 PF03591 AzlC protein GWK28_01025 PF00324 Amino acid permease GWK28_01030 PF00155 Aminotransferase class I and II GWK28_01030 PF00392 Bacterial regulatory proteins, gntR family GWK28_01035 PF00202 Aminotransferase class-III GWK28_01040 PF00171 Aldehyde dehydrogenase family GWK28_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_01050 PF00857 Isochorismatase family GWK28_01055 PF02678 Pirin GWK28_01055 PF05726 Pirin C-terminal cupin domain GWK28_01060 PF01593 Flavin containing amine oxidoreductase GWK28_01080 PF07690 Major Facilitator Superfamily GWK28_01085 PF03466 LysR substrate binding domain GWK28_01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_01105 PF00248 Aldo/keto reductase family GWK28_01110 PF02311 AraC-like ligand binding domain GWK28_01110 PF12833 Helix-turn-helix domain GWK28_01130 PF13737 Transposase DDE domain GWK28_01145 PF01638 HxlR-like helix-turn-helix GWK28_01150 PF02525 Flavodoxin-like fold GWK28_01170 PF02705 K+ potassium transporter GWK28_01210 PF00977 Histidine biosynthesis protein GWK28_01215 PF01636 Phosphotransferase enzyme family GWK28_01240 PF00977 Histidine biosynthesis protein GWK28_01255 PF00117 Glutamine amidotransferase class-I GWK28_01260 PF00475 Imidazoleglycerol-phosphate dehydratase GWK28_01280 PF00583 Acetyltransferase (GNAT) family GWK28_01285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GWK28_01285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GWK28_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_01295 PF00672 HAMP domain GWK28_01295 PF00512 His Kinase A (phospho-acceptor) domain GWK28_01300 PF00486 Transcriptional regulatory protein, C terminal GWK28_01300 PF00072 Response regulator receiver domain GWK28_01305 PF17674 HHH domain GWK28_01305 PF00575 S1 RNA binding domain GWK28_01305 PF16921 Tex protein YqgF-like domain GWK28_01305 PF09371 Tex-like protein N-terminal domain GWK28_01310 PF01740 STAS domain GWK28_01310 PF00916 Sulfate permease family GWK28_01315 PF00106 short chain dehydrogenase GWK28_01320 PF01053 Cys/Met metabolism PLP-dependent enzyme GWK28_01325 PF12848 ABC transporter GWK28_01325 PF00005 ABC transporter GWK28_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_01350 PF00529 HlyD membrane-fusion protein of T1SS GWK28_01355 PF00873 AcrB/AcrD/AcrF family GWK28_01360 PF01545 Cation efflux family GWK28_01390 PF00324 Amino acid permease GWK28_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain GWK28_01420 PF01795 MraW methylase family GWK28_01430 PF00905 Penicillin binding protein transpeptidase domain GWK28_01430 PF03717 Penicillin-binding Protein dimerisation domain GWK28_01435 PF02875 Mur ligase family, glutamate ligase domain GWK28_01435 PF01225 Mur ligase family, catalytic domain GWK28_01435 PF08245 Mur ligase middle domain GWK28_01440 PF02875 Mur ligase family, glutamate ligase domain GWK28_01440 PF08245 Mur ligase middle domain GWK28_01440 PF01225 Mur ligase family, catalytic domain GWK28_01445 PF00953 Glycosyl transferase family 4 GWK28_01455 PF13847 Methyltransferase domain GWK28_01460 PF00912 Transglycosylase GWK28_01460 PF00905 Penicillin binding protein transpeptidase domain GWK28_01460 PF17092 Penicillin-binding protein OB-like domain GWK28_01465 PF11104 Type IV pilus assembly protein PilM; GWK28_01470 PF05137 Fimbrial assembly protein (PilN) GWK28_01475 PF04350 Pilus assembly protein, PilO GWK28_01485 PF07660 Secretin and TonB N terminus short domain GWK28_01485 PF11741 AMIN domain GWK28_01485 PF00263 Bacterial type II and III secretion system protein GWK28_01485 PF03958 Bacterial type II/III secretion system short domain GWK28_01490 PF01202 Shikimate kinase GWK28_01495 PF01761 3-dehydroquinate synthase GWK28_01505 PF01645 Conserved region in glutamate synthase GWK28_01505 PF01493 GXGXG motif GWK28_01505 PF00310 Glutamine amidotransferases class-II GWK28_01505 PF04898 Glutamate synthase central domain GWK28_01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_01510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GWK28_01520 PF04011 LemA family GWK28_01525 PF04536 TPM domain GWK28_01535 PF00114 Pilin (bacterial filament) GWK28_01535 PF07963 Prokaryotic N-terminal methylation motif GWK28_01545 PF15864 Protein glycosylation ligase GWK28_01545 PF04932 O-Antigen ligase GWK28_01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal GWK28_01550 PF00210 Ferritin-like domain GWK28_01555 PF04324 BFD-like [2Fe-2S] binding domain GWK28_01560 PF01042 Endoribonuclease L-PSP GWK28_01565 PF04607 Region found in RelA / SpoT proteins GWK28_01565 PF13291 ACT domain GWK28_01565 PF02824 TGS domain GWK28_01575 PF01192 RNA polymerase Rpb6 GWK28_01580 PF00625 Guanylate kinase GWK28_01585 PF02401 LytB protein GWK28_01625 PF00886 Ribosomal protein S16 GWK28_01630 PF05239 PRC-barrel domain GWK28_01630 PF01782 RimM N-terminal domain GWK28_01635 PF01746 tRNA (Guanine-1)-methyltransferase GWK28_01640 PF01245 Ribosomal protein L19 GWK28_01645 PF00561 alpha/beta hydrolase fold GWK28_01650 PF03280 Proteobacterial lipase chaperone protein GWK28_01655 PF09157 Pseudouridine synthase II TruB, C-terminal GWK28_01655 PF16198 tRNA pseudouridylate synthase B C-terminal domain GWK28_01655 PF01509 TruB family pseudouridylate synthase (N terminal domain) GWK28_01660 PF01925 Sulfite exporter TauE/SafE GWK28_01670 PF00892 EamA-like transporter family GWK28_01675 PF00892 EamA-like transporter family GWK28_01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GWK28_01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GWK28_01685 PF01565 FAD binding domain GWK28_01685 PF02913 FAD linked oxidases, C-terminal domain GWK28_01695 PF03992 Antibiotic biosynthesis monooxygenase GWK28_01700 PF02525 Flavodoxin-like fold GWK28_01710 PF07690 Major Facilitator Superfamily GWK28_01715 PF12805 FUSC-like inner membrane protein yccS GWK28_01720 PF00080 Copper/zinc superoxide dismutase (SODC) GWK28_01725 PF01594 AI-2E family transporter GWK28_01730 PF13614 AAA domain GWK28_01750 PF08241 Methyltransferase domain GWK28_01760 PF00324 Amino acid permease GWK28_01765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GWK28_01765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GWK28_01770 PF00202 Aminotransferase class-III GWK28_01775 PF04958 Arginine N-succinyltransferase beta subunit GWK28_01780 PF00171 Aldehyde dehydrogenase family GWK28_01785 PF04996 Succinylarginine dihydrolase GWK28_01790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GWK28_01820 PF03466 LysR substrate binding domain GWK28_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_01825 PF00892 EamA-like transporter family GWK28_01840 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system GWK28_01845 PF02092 Glycyl-tRNA synthetase beta subunit GWK28_01845 PF05746 DALR anticodon binding domain GWK28_01850 PF02091 Glycyl-tRNA synthetase alpha subunit GWK28_01875 PF00571 CBS domain GWK28_01880 PF04024 PspC domain GWK28_01890 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_01890 PF12806 Acetyl-CoA dehydrogenase C-terminal like GWK28_01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_01890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_01900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GWK28_01900 PF08501 Shikimate dehydrogenase substrate binding domain GWK28_01900 PF01488 Shikimate / quinate 5-dehydrogenase GWK28_01905 PF01218 Coproporphyrinogen III oxidase GWK28_01910 PF00925 GTP cyclohydrolase II GWK28_01915 PF02779 Transketolase, pyrimidine binding domain GWK28_01915 PF02780 Transketolase, C-terminal domain GWK28_01915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GWK28_01920 PF00459 Inositol monophosphatase family GWK28_01925 PF03880 DbpA RNA binding domain GWK28_01925 PF00270 DEAD/DEAH box helicase GWK28_01925 PF12343 Cold shock protein DEAD box A GWK28_01925 PF00271 Helicase conserved C-terminal domain GWK28_01935 PF00005 ABC transporter GWK28_01940 PF02405 Permease MlaE GWK28_01950 PF05494 MlaC protein GWK28_01960 PF01544 CorA-like Mg2+ transporter protein GWK28_01965 PF03641 Possible lysine decarboxylase GWK28_01970 PF00293 NUDIX domain GWK28_01975 PF00156 Phosphoribosyl transferase domain GWK28_01980 PF00271 Helicase conserved C-terminal domain GWK28_01980 PF00270 DEAD/DEAH box helicase GWK28_01980 PF17191 RecG wedge domain GWK28_01995 PF01553 Acyltransferase GWK28_02005 PF00375 Sodium:dicarboxylate symporter family GWK28_02015 PF01926 50S ribosome-binding GTPase GWK28_02020 PF02082 Transcriptional regulator GWK28_02025 PF00970 Oxidoreductase FAD-binding domain GWK28_02025 PF00175 Oxidoreductase NAD-binding domain GWK28_02025 PF00042 Globin GWK28_02035 PF05872 Bacterial protein of unknown function (DUF853) GWK28_02040 PF01053 Cys/Met metabolism PLP-dependent enzyme GWK28_02045 PF00117 Glutamine amidotransferase class-I GWK28_02050 PF00338 Ribosomal protein S10p/S20e GWK28_02055 PF00297 Ribosomal protein L3 GWK28_02060 PF00573 Ribosomal protein L4/L1 family GWK28_02065 PF00276 Ribosomal protein L23 GWK28_02070 PF00181 Ribosomal Proteins L2, RNA binding domain GWK28_02070 PF03947 Ribosomal Proteins L2, C-terminal domain GWK28_02075 PF00203 Ribosomal protein S19 GWK28_02080 PF00237 Ribosomal protein L22p/L17e GWK28_02085 PF07650 KH domain GWK28_02085 PF00189 Ribosomal protein S3, C-terminal domain GWK28_02090 PF00252 Ribosomal protein L16p/L10e GWK28_02095 PF00831 Ribosomal L29 protein GWK28_02100 PF00366 Ribosomal protein S17 GWK28_02105 PF00238 Ribosomal protein L14p/L23e GWK28_02110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GWK28_02110 PF00467 KOW motif GWK28_02115 PF00281 Ribosomal protein L5 GWK28_02115 PF00673 ribosomal L5P family C-terminus GWK28_02120 PF00253 Ribosomal protein S14p/S29e GWK28_02125 PF00410 Ribosomal protein S8 GWK28_02130 PF00347 Ribosomal protein L6 GWK28_02135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GWK28_02140 PF00333 Ribosomal protein S5, N-terminal domain GWK28_02140 PF03719 Ribosomal protein S5, C-terminal domain GWK28_02145 PF00327 Ribosomal protein L30p/L7e GWK28_02150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GWK28_02155 PF00344 SecY translocase GWK28_02160 PF00444 Ribosomal protein L36 GWK28_02165 PF00416 Ribosomal protein S13/S18 GWK28_02170 PF00411 Ribosomal protein S11 GWK28_02175 PF00163 Ribosomal protein S4/S9 N-terminal domain GWK28_02175 PF01479 S4 domain GWK28_02180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GWK28_02180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GWK28_02180 PF01000 RNA polymerase Rpb3/RpoA insert domain GWK28_02185 PF01196 Ribosomal protein L17 GWK28_02190 PF00743 Flavin-binding monooxygenase-like GWK28_02195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_02195 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_02195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_02200 PF03937 Flavinator of succinate dehydrogenase GWK28_02230 PF09526 Probable metal-binding protein (DUF2387) GWK28_02235 PF01432 Peptidase family M3 GWK28_02240 PF00773 RNB domain GWK28_02240 PF00575 S1 RNA binding domain GWK28_02240 PF08461 Ribonuclease R winged-helix domain GWK28_02240 PF08206 Ribonuclease B OB domain GWK28_02240 PF17876 Cold shock domain GWK28_02285 PF01557 Fumarylacetoacetate (FAA) hydrolase family GWK28_02290 PF12833 Helix-turn-helix domain GWK28_02295 PF00892 EamA-like transporter family GWK28_02300 PF03631 Virulence factor BrkB GWK28_02305 PF03358 NADPH-dependent FMN reductase GWK28_02330 PF02130 Uncharacterized protein family UPF0054 GWK28_02335 PF02562 PhoH-like protein GWK28_02340 PF00919 Uncharacterized protein family UPF0004 GWK28_02340 PF04055 Radical SAM superfamily GWK28_02340 PF01938 TRAM domain GWK28_02345 PF01551 Peptidase family M23 GWK28_02345 PF10145 Phage-related minor tail protein GWK28_02345 PF01464 Transglycosylase SLT domain GWK28_02355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GWK28_02355 PF00056 lactate/malate dehydrogenase, NAD binding domain GWK28_02375 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GWK28_02380 PF01066 CDP-alcohol phosphatidyltransferase GWK28_02425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_02425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_02425 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_02430 PF00440 Bacterial regulatory proteins, tetR family GWK28_02430 PF17932 Tetracyclin repressor-like, C-terminal domain GWK28_02445 PF01039 Carboxyl transferase domain GWK28_02450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_02450 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_02450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_02460 PF02785 Biotin carboxylase C-terminal domain GWK28_02460 PF00364 Biotin-requiring enzyme GWK28_02460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_02460 PF00289 Biotin carboxylase, N-terminal domain GWK28_02470 PF04386 Stringent starvation protein B GWK28_02475 PF13417 Glutathione S-transferase, N-terminal domain GWK28_02475 PF00043 Glutathione S-transferase, C-terminal domain GWK28_02480 PF00380 Ribosomal protein S9/S16 GWK28_02485 PF00572 Ribosomal protein L13 GWK28_02490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GWK28_02495 PF00398 Ribosomal RNA adenine dimethylase GWK28_02500 PF00149 Calcineurin-like phosphoesterase GWK28_02520 PF13167 GTP-binding GTPase N-terminal GWK28_02520 PF16360 GTP-binding GTPase Middle Region GWK28_02520 PF01926 50S ribosome-binding GTPase GWK28_02530 PF13091 PLD-like domain GWK28_02535 PF10518 TAT (twin-arginine translocation) pathway signal sequence GWK28_02535 PF00149 Calcineurin-like phosphoesterase GWK28_02540 PF01389 OmpA-like transmembrane domain GWK28_02540 PF00691 OmpA family GWK28_02545 PF00990 Diguanylate cyclase, GGDEF domain GWK28_02545 PF17152 Periplasmic sensor domain GWK28_02580 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_02580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GWK28_02590 PF00753 Metallo-beta-lactamase superfamily GWK28_02590 PF04273 Putative phosphatase (DUF442) GWK28_02595 PF00561 alpha/beta hydrolase fold GWK28_02600 PF00085 Thioredoxin GWK28_02605 PF03061 Thioesterase superfamily GWK28_02615 PF04461 Protein of unknown function (DUF520) GWK28_02625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GWK28_02625 PF01266 FAD dependent oxidoreductase GWK28_02635 PF03795 YCII-related domain GWK28_02640 PF04279 Intracellular septation protein A GWK28_02645 PF02811 PHP domain GWK28_02650 PF01062 Bestrophin, RFP-TM, chloride channel GWK28_02655 PF04002 RadC-like JAB domain GWK28_02660 PF02441 Flavoprotein GWK28_02660 PF04127 DNA / pantothenate metabolism flavoprotein GWK28_02665 PF07549 SecD/SecF GG Motif GWK28_02665 PF02355 Protein export membrane protein GWK28_02670 PF07549 SecD/SecF GG Motif GWK28_02670 PF13721 SecD export protein N-terminal TM region GWK28_02670 PF02355 Protein export membrane protein GWK28_02675 PF02699 Preprotein translocase subunit GWK28_02680 PF01702 Queuine tRNA-ribosyltransferase GWK28_02695 PF02547 Queuosine biosynthesis protein GWK28_02705 PF07689 KaiB domain GWK28_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_02705 PF00512 His Kinase A (phospho-acceptor) domain GWK28_02710 PF08335 GlnD PII-uridylyltransferase GWK28_02710 PF03710 Glutamate-ammonia ligase adenylyltransferase GWK28_02715 PF01063 Amino-transferase class IV GWK28_02725 PF01522 Polysaccharide deacetylase GWK28_02730 PF13439 Glycosyltransferase Family 4 GWK28_02730 PF00534 Glycosyl transferases group 1 GWK28_02750 PF00534 Glycosyl transferases group 1 GWK28_02750 PF13439 Glycosyltransferase Family 4 GWK28_02755 PF00535 Glycosyl transferase family 2 GWK28_02760 PF13439 Glycosyltransferase Family 4 GWK28_02760 PF00534 Glycosyl transferases group 1 GWK28_02770 PF01336 OB-fold nucleic acid binding domain GWK28_02770 PF00152 tRNA synthetases class II (D, K and N) GWK28_02770 PF02938 GAD domain GWK28_02780 PF00593 TonB dependent receptor GWK28_02780 PF07715 TonB-dependent Receptor Plug Domain GWK28_02800 PF06146 Phosphate-starvation-inducible E GWK28_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_02805 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like GWK28_02810 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like GWK28_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_02820 PF00672 HAMP domain GWK28_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_02820 PF00512 His Kinase A (phospho-acceptor) domain GWK28_02825 PF00486 Transcriptional regulatory protein, C terminal GWK28_02825 PF00072 Response regulator receiver domain GWK28_02830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GWK28_02850 PF01923 Cobalamin adenosyltransferase GWK28_02855 PF07715 TonB-dependent Receptor Plug Domain GWK28_02855 PF00593 TonB dependent receptor GWK28_02860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GWK28_02865 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_02890 PF00290 Tryptophan synthase alpha chain GWK28_02895 PF01039 Carboxyl transferase domain GWK28_02900 PF08245 Mur ligase middle domain GWK28_02900 PF02875 Mur ligase family, glutamate ligase domain GWK28_02915 PF00753 Metallo-beta-lactamase superfamily GWK28_02920 PF00578 AhpC/TSA family GWK28_02920 PF10417 C-terminal domain of 1-Cys peroxiredoxin GWK28_02925 PF07517 SecA DEAD-like domain GWK28_02925 PF01043 SecA preprotein cross-linking domain GWK28_02925 PF07516 SecA Wing and Scaffold domain GWK28_02925 PF02810 SEC-C motif GWK28_02935 PF00083 Sugar (and other) transporter GWK28_02935 PF07690 Major Facilitator Superfamily GWK28_02940 PF03006 Haemolysin-III related GWK28_02965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GWK28_02965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GWK28_02965 PF00378 Enoyl-CoA hydratase/isomerase GWK28_02970 PF00108 Thiolase, N-terminal domain GWK28_02970 PF02803 Thiolase, C-terminal domain GWK28_02975 PF12833 Helix-turn-helix domain GWK28_02975 PF02311 AraC-like ligand binding domain GWK28_02980 PF02515 CoA-transferase family III GWK28_02985 PF04966 Carbohydrate-selective porin, OprB family GWK28_02990 PF01011 PQQ enzyme repeat GWK28_02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GWK28_02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GWK28_03005 PF00893 Small Multidrug Resistance protein GWK28_03015 PF00108 Thiolase, N-terminal domain GWK28_03015 PF02803 Thiolase, C-terminal domain GWK28_03025 PF13505 Outer membrane protein beta-barrel domain GWK28_03025 PF00691 OmpA family GWK28_03035 PF01139 tRNA-splicing ligase RtcB GWK28_03040 PF00324 Amino acid permease GWK28_03045 PF08468 Methyltransferase small domain N-terminal GWK28_03045 PF05175 Methyltransferase small domain GWK28_03050 PF00860 Permease family GWK28_03055 PF00679 Elongation factor G C-terminus GWK28_03055 PF03144 Elongation factor Tu domain 2 GWK28_03055 PF00009 Elongation factor Tu GTP binding domain GWK28_03060 PF01741 Large-conductance mechanosensitive channel, MscL GWK28_03075 PF06827 Zinc finger found in FPG and IleRS GWK28_03075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GWK28_03075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GWK28_03080 PF02245 Methylpurine-DNA glycosylase (MPG) GWK28_03085 PF00593 TonB dependent receptor GWK28_03085 PF07715 TonB-dependent Receptor Plug Domain GWK28_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_03095 PF03547 Membrane transport protein GWK28_03105 PF13098 Thioredoxin-like domain GWK28_03105 PF10411 Disulfide bond isomerase protein N-terminus GWK28_03110 PF01571 Aminomethyltransferase folate-binding domain GWK28_03120 PF04343 Protein of unknown function, DUF488 GWK28_03125 PF03831 PhnA domain GWK28_03125 PF08274 PhnA Zinc-Ribbon GWK28_03135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GWK28_03135 PF04073 Aminoacyl-tRNA editing domain GWK28_03135 PF03129 Anticodon binding domain GWK28_03140 PF00873 AcrB/AcrD/AcrF family GWK28_03155 PF00072 Response regulator receiver domain GWK28_03160 PF00072 Response regulator receiver domain GWK28_03165 PF01584 CheW-like domain GWK28_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GWK28_03170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GWK28_03175 PF00072 Response regulator receiver domain GWK28_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_03175 PF01627 Hpt domain GWK28_03175 PF01584 CheW-like domain GWK28_03185 PF01546 Peptidase family M20/M25/M40 GWK28_03185 PF07687 Peptidase dimerisation domain GWK28_03190 PF08085 Entericidin EcnA/B family GWK28_03200 PF04304 Protein of unknown function (DUF454) GWK28_03205 PF03734 L,D-transpeptidase catalytic domain GWK28_03205 PF17969 L,D-transpeptidase C-terminal domain GWK28_03245 PF00175 Oxidoreductase NAD-binding domain GWK28_03245 PF00667 FAD binding domain GWK28_03245 PF00258 Flavodoxin GWK28_03255 PF12805 FUSC-like inner membrane protein yccS GWK28_03260 PF07690 Major Facilitator Superfamily GWK28_03265 PF00881 Nitroreductase family GWK28_03280 PF01235 Sodium:alanine symporter family GWK28_03285 PF01734 Patatin-like phospholipase GWK28_03290 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_03290 PF13291 ACT domain GWK28_03295 PF05992 SbmA/BacA-like family GWK28_03300 PF05649 Peptidase family M13 GWK28_03300 PF01431 Peptidase family M13 GWK28_03325 PF02637 GatB domain GWK28_03325 PF02934 GatB/GatE catalytic domain GWK28_03330 PF01425 Amidase GWK28_03335 PF02686 Glu-tRNAGln amidotransferase C subunit GWK28_03345 PF04085 rod shape-determining protein MreC GWK28_03350 PF04093 rod shape-determining protein MreD GWK28_03355 PF02545 Maf-like protein GWK28_03360 PF10150 Ribonuclease E/G family GWK28_03360 PF00575 S1 RNA binding domain GWK28_03370 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GWK28_03370 PF06974 Protein of unknown function (DUF1298) GWK28_03375 PF01507 Phosphoadenosine phosphosulfate reductase family GWK28_03390 PF02525 Flavodoxin-like fold GWK28_03410 PF02673 Bacitracin resistance protein BacA GWK28_03415 PF06719 AraC-type transcriptional regulator N-terminus GWK28_03415 PF12833 Helix-turn-helix domain GWK28_03420 PF00698 Acyl transferase domain GWK28_03420 PF08990 Erythronolide synthase docking GWK28_03420 PF09277 Erythronolide synthase, docking GWK28_03420 PF16197 Ketoacyl-synthetase C-terminal extension GWK28_03420 PF00109 Beta-ketoacyl synthase, N-terminal domain GWK28_03420 PF02801 Beta-ketoacyl synthase, C-terminal domain GWK28_03420 PF08659 KR domain GWK28_03420 PF00550 Phosphopantetheine attachment site GWK28_03420 PF14765 Polyketide synthase dehydratase GWK28_03420 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_03425 PF01965 DJ-1/PfpI family GWK28_03465 PF00872 Transposase, Mutator family GWK28_03480 PF00772 DnaB-like helicase N terminal domain GWK28_03480 PF03796 DnaB-like helicase C terminal domain GWK28_03525 PF13356 Arm DNA-binding domain GWK28_03525 PF00589 Phage integrase family GWK28_03535 PF00324 Amino acid permease GWK28_03540 PF04303 PrpF protein GWK28_03545 PF00348 Polyprenyl synthetase GWK28_03550 PF04237 YjbR GWK28_03555 PF01145 SPFH domain / Band 7 family GWK28_03565 PF01734 Patatin-like phospholipase GWK28_03585 PF08019 Phosphoethanolamine transferase EptA/EptB GWK28_03585 PF00884 Sulfatase GWK28_03590 PF00072 Response regulator receiver domain GWK28_03590 PF00486 Transcriptional regulatory protein, C terminal GWK28_03595 PF00512 His Kinase A (phospho-acceptor) domain GWK28_03595 PF08521 Two-component sensor kinase N-terminal GWK28_03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_03605 PF00909 Ammonium Transporter Family GWK28_03615 PF08264 Anticodon-binding domain of tRNA GWK28_03615 PF00133 tRNA synthetases class I (I, L, M and V) GWK28_03615 PF10458 Valyl tRNA synthetase tRNA binding arm GWK28_03635 PF01906 Putative heavy-metal-binding GWK28_03640 PF01906 Putative heavy-metal-binding GWK28_03645 PF02321 Outer membrane efflux protein GWK28_03650 PF00873 AcrB/AcrD/AcrF family GWK28_03655 PF00529 HlyD membrane-fusion protein of T1SS GWK28_03655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_03660 PF01569 PAP2 superfamily GWK28_03670 PF00348 Polyprenyl synthetase GWK28_03680 PF00829 Ribosomal prokaryotic L21 protein GWK28_03685 PF01016 Ribosomal L27 protein GWK28_03690 PF03548 Outer membrane lipoprotein carrier protein LolA GWK28_03700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GWK28_03700 PF02403 Seryl-tRNA synthetase N-terminal domain GWK28_03705 PF10414 Sirohaem synthase dimerisation region GWK28_03705 PF14824 Sirohaem biosynthesis protein central GWK28_03705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GWK28_03710 PF00588 SpoU rRNA Methylase family GWK28_03715 PF01638 HxlR-like helix-turn-helix GWK28_03720 PF03358 NADPH-dependent FMN reductase GWK28_03725 PF13520 Amino acid permease GWK28_03730 PF00465 Iron-containing alcohol dehydrogenase GWK28_03740 PF03099 Biotin/lipoate A/B protein ligase family GWK28_03745 PF04359 Protein of unknown function (DUF493) GWK28_03750 PF00140 Sigma-70 factor, region 1.2 GWK28_03750 PF03979 Sigma-70 factor, region 1.1 GWK28_03750 PF04545 Sigma-70, region 4 GWK28_03750 PF04542 Sigma-70 region 2 GWK28_03750 PF04546 Sigma-70, non-essential region GWK28_03750 PF04539 Sigma-70 region 3 GWK28_03765 PF17773 UPF0176 acylphosphatase like domain GWK28_03765 PF00581 Rhodanese-like domain GWK28_03775 PF00285 Citrate synthase, C-terminal domain GWK28_03780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GWK28_03785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GWK28_03790 PF02910 Fumarate reductase flavoprotein C-term GWK28_03790 PF00890 FAD binding domain GWK28_03795 PF13085 2Fe-2S iron-sulfur cluster binding domain GWK28_03810 PF02779 Transketolase, pyrimidine binding domain GWK28_03810 PF00676 Dehydrogenase E1 component GWK28_03810 PF16870 2-oxoglutarate dehydrogenase C-terminal GWK28_03810 PF16078 2-oxoglutarate dehydrogenase N-terminus GWK28_03815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GWK28_03815 PF02817 e3 binding domain GWK28_03815 PF00364 Biotin-requiring enzyme GWK28_03820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GWK28_03820 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_03825 PF08442 ATP-grasp domain GWK28_03825 PF00549 CoA-ligase GWK28_03830 PF00549 CoA-ligase GWK28_03830 PF02629 CoA binding domain GWK28_03835 PF00579 tRNA synthetases class I (W and Y) GWK28_03840 PF05661 Protein of unknown function (DUF808) GWK28_03845 PF04228 Putative neutral zinc metallopeptidase GWK28_03850 PF00999 Sodium/hydrogen exchanger family GWK28_03865 PF09587 Bacterial capsule synthesis protein PGA_cap GWK28_03875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GWK28_03880 PF00582 Universal stress protein family GWK28_03885 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_03890 PF03449 Transcription elongation factor, N-terminal GWK28_03890 PF01272 Transcription elongation factor, GreA/GreB, C-term GWK28_03895 PF02142 MGS-like domain GWK28_03895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_03895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GWK28_03900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GWK28_03900 PF00117 Glutamine amidotransferase class-I GWK28_03915 PF01985 CRS1 / YhbY (CRM) domain GWK28_03920 PF01728 FtsJ-like methyltransferase GWK28_03925 PF06480 FtsH Extracellular GWK28_03925 PF17862 AAA+ lid domain GWK28_03925 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_03925 PF01434 Peptidase family M41 GWK28_03930 PF00809 Pterin binding enzyme GWK28_03950 PF16655 PhoD-like phosphatase, N-terminal domain GWK28_03950 PF09423 PhoD-like phosphatase GWK28_03965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GWK28_03965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GWK28_03980 PF00083 Sugar (and other) transporter GWK28_03985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GWK28_03985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GWK28_03990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GWK28_03990 PF01266 FAD dependent oxidoreductase GWK28_03995 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GWK28_03995 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain GWK28_04000 PF00781 Diacylglycerol kinase catalytic domain GWK28_04005 PF00149 Calcineurin-like phosphoesterase GWK28_04010 PF00166 Chaperonin 10 Kd subunit GWK28_04015 PF00118 TCP-1/cpn60 chaperonin family GWK28_04020 PF01219 Prokaryotic diacylglycerol kinase GWK28_04025 PF00753 Metallo-beta-lactamase superfamily GWK28_04030 PF03009 Glycerophosphoryl diester phosphodiesterase family GWK28_04035 PF00873 AcrB/AcrD/AcrF family GWK28_04045 PF01435 Peptidase family M48 GWK28_04050 PF01464 Transglycosylase SLT domain GWK28_04055 PF01171 PP-loop family GWK28_04065 PF01464 Transglycosylase SLT domain GWK28_04065 PF00497 Bacterial extracellular solute-binding proteins, family 3 GWK28_04070 PF01272 Transcription elongation factor, GreA/GreB, C-term GWK28_04070 PF03449 Transcription elongation factor, N-terminal GWK28_04090 PF12728 Helix-turn-helix domain GWK28_04095 PF00011 Hsp20/alpha crystallin family GWK28_04100 PF17871 AAA lid domain GWK28_04100 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_04100 PF07724 AAA domain (Cdc48 subfamily) GWK28_04100 PF10431 C-terminal, D2-small domain, of ClpB protein GWK28_04100 PF02861 Clp amino terminal domain, pathogenicity island component GWK28_04145 PF01435 Peptidase family M48 GWK28_04150 PF13180 PDZ domain GWK28_04190 PF01272 Transcription elongation factor, GreA/GreB, C-term GWK28_04190 PF03449 Transcription elongation factor, N-terminal GWK28_04230 PF00501 AMP-binding enzyme GWK28_04230 PF13193 AMP-binding enzyme C-terminal domain GWK28_04230 PF00668 Condensation domain GWK28_04230 PF00975 Thioesterase domain GWK28_04230 PF00550 Phosphopantetheine attachment site GWK28_04235 PF01119 DNA mismatch repair protein, C-terminal domain GWK28_04235 PF08676 MutL C terminal dimerisation domain GWK28_04260 PF00881 Nitroreductase family GWK28_04265 PF00106 short chain dehydrogenase GWK28_04275 PF02595 Glycerate kinase family GWK28_04280 PF00384 Molybdopterin oxidoreductase GWK28_04285 PF02634 FdhD/NarQ family GWK28_04290 PF06803 Protein of unknown function (DUF1232) GWK28_04295 PF11890 Domain of unknown function (DUF3410) GWK28_04295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GWK28_04295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GWK28_04300 PF00152 tRNA synthetases class II (D, K and N) GWK28_04310 PF18073 Rubredoxin metal binding domain GWK28_04315 PF00324 Amino acid permease GWK28_04325 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GWK28_04325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GWK28_04330 PF01678 Diaminopimelate epimerase GWK28_04335 PF01810 LysE type translocator GWK28_04340 PF02899 Phage integrase, N-terminal SAM-like domain GWK28_04340 PF00589 Phage integrase family GWK28_04345 PF01012 Electron transfer flavoprotein domain GWK28_04350 PF00766 Electron transfer flavoprotein FAD-binding domain GWK28_04350 PF01012 Electron transfer flavoprotein domain GWK28_04355 PF03989 DNA gyrase C-terminal domain, beta-propeller GWK28_04355 PF00521 DNA gyrase/topoisomerase IV, subunit A GWK28_04370 PF00535 Glycosyl transferase family 2 GWK28_04390 PF13533 Biotin-lipoyl like GWK28_04400 PF00266 Aminotransferase class-V GWK28_04415 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GWK28_04425 PF02687 FtsX-like permease family GWK28_04425 PF12704 MacB-like periplasmic core domain GWK28_04430 PF00005 ABC transporter GWK28_04435 PF00753 Metallo-beta-lactamase superfamily GWK28_04435 PF03772 Competence protein GWK28_04435 PF13567 Domain of unknown function (DUF4131) GWK28_04445 PF06965 Na+/H+ antiporter 1 GWK28_04445 PF01343 Peptidase family S49 GWK28_04450 PF12697 Alpha/beta hydrolase family GWK28_04455 PF00551 Formyl transferase GWK28_04460 PF00586 AIR synthase related protein, N-terminal domain GWK28_04460 PF02769 AIR synthase related protein, C-terminal domain GWK28_04465 PF01594 AI-2E family transporter GWK28_04470 PF08299 Bacterial dnaA protein helix-turn-helix GWK28_04470 PF11638 DnaA N-terminal domain GWK28_04470 PF00308 Bacterial dnaA protein GWK28_04500 PF00588 SpoU rRNA Methylase family GWK28_04500 PF08032 RNA 2'-O ribose methyltransferase substrate binding GWK28_04505 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GWK28_04515 PF00691 OmpA family GWK28_04520 PF04052 TolB amino-terminal domain GWK28_04520 PF07676 WD40-like Beta Propeller Repeat GWK28_04530 PF02472 Biopolymer transport protein ExbD/TolR GWK28_04535 PF01618 MotA/TolQ/ExbB proton channel family GWK28_04540 PF03061 Thioesterase superfamily GWK28_04545 PF01546 Peptidase family M20/M25/M40 GWK28_04545 PF07687 Peptidase dimerisation domain GWK28_04550 PF05491 RuvB C-terminal winged helix domain GWK28_04550 PF05496 Holliday junction DNA helicase RuvB P-loop domain GWK28_04550 PF17864 RuvB AAA lid domain GWK28_04555 PF07499 RuvA, C-terminal domain GWK28_04555 PF01330 RuvA N terminal domain GWK28_04560 PF01966 HD domain GWK28_04565 PF02769 AIR synthase related protein, C-terminal domain GWK28_04565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GWK28_04565 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GWK28_04570 PF07690 Major Facilitator Superfamily GWK28_04575 PF01784 NIF3 (NGG1p interacting factor 3) GWK28_04580 PF00378 Enoyl-CoA hydratase/isomerase GWK28_04585 PF00293 NUDIX domain GWK28_04585 PF01467 Cytidylyltransferase-like GWK28_04595 PF00578 AhpC/TSA family GWK28_04610 PF06508 Queuosine biosynthesis protein QueC GWK28_04620 PF14602 Hexapeptide repeat of succinyl-transferase GWK28_04620 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_04620 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GWK28_04630 PF03466 LysR substrate binding domain GWK28_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_04635 PF12857 TOBE-like domain GWK28_04635 PF00005 ABC transporter GWK28_04640 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_04645 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_04660 PF01063 Amino-transferase class IV GWK28_04665 PF02618 YceG-like family GWK28_04670 PF02223 Thymidylate kinase GWK28_04680 PF02910 Fumarate reductase flavoprotein C-term GWK28_04680 PF00890 FAD binding domain GWK28_04685 PF13180 PDZ domain GWK28_04695 PF03144 Elongation factor Tu domain 2 GWK28_04695 PF00679 Elongation factor G C-terminus GWK28_04695 PF06421 GTP-binding protein LepA C-terminus GWK28_04695 PF00009 Elongation factor Tu GTP binding domain GWK28_04700 PF10502 Signal peptidase, peptidase S26 GWK28_04710 PF14622 Ribonuclease-III-like GWK28_04710 PF00035 Double-stranded RNA binding motif GWK28_04715 PF01926 50S ribosome-binding GTPase GWK28_04715 PF07650 KH domain GWK28_04725 PF11967 Recombination protein O N terminal GWK28_04725 PF02565 Recombination protein O C terminal GWK28_04730 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GWK28_04735 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GWK28_04740 PF00106 short chain dehydrogenase GWK28_04770 PF00155 Aminotransferase class I and II GWK28_04780 PF00990 Diguanylate cyclase, GGDEF domain GWK28_04780 PF17151 Periplasmic sensor domain GWK28_04790 PF02151 UvrB/uvrC motif GWK28_04790 PF12344 Ultra-violet resistance protein B GWK28_04790 PF04851 Type III restriction enzyme, res subunit GWK28_04790 PF00271 Helicase conserved C-terminal domain GWK28_04790 PF17757 UvrB interaction domain GWK28_04800 PF00892 EamA-like transporter family GWK28_04805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GWK28_04805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GWK28_04820 PF01926 50S ribosome-binding GTPase GWK28_04820 PF01018 GTP1/OBG GWK28_04825 PF00696 Amino acid kinase family GWK28_04825 PF01472 PUA domain GWK28_04835 PF07759 Protein of unknown function (DUF1615) GWK28_04840 PF01207 Dihydrouridine synthase (Dus) GWK28_04845 PF03060 Nitronate monooxygenase GWK28_04860 PF02350 UDP-N-acetylglucosamine 2-epimerase GWK28_04890 PF00875 DNA photolyase GWK28_04890 PF03441 FAD binding domain of DNA photolyase GWK28_04895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_04905 PF00768 D-alanyl-D-alanine carboxypeptidase GWK28_04905 PF07943 Penicillin-binding protein 5, C-terminal domain GWK28_04915 PF03971 Monomeric isocitrate dehydrogenase GWK28_04920 PF00849 RNA pseudouridylate synthase GWK28_04925 PF00180 Isocitrate/isopropylmalate dehydrogenase GWK28_04945 PF06779 Uncharacterised MFS-type transporter YbfB GWK28_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_04950 PF03466 LysR substrate binding domain GWK28_04955 PF00375 Sodium:dicarboxylate symporter family GWK28_04960 PF02567 Phenazine biosynthesis-like protein GWK28_04965 PF00675 Insulinase (Peptidase family M16) GWK28_04965 PF05193 Peptidase M16 inactive domain GWK28_04990 PF02581 Thiamine monophosphate synthase GWK28_04995 PF00202 Aminotransferase class-III GWK28_05005 PF00849 RNA pseudouridylate synthase GWK28_05010 PF18337 RapA N-terminal Tudor like domain GWK28_05010 PF18339 RapA N-terminal Tudor like domain 1 GWK28_05010 PF12137 RNA polymerase recycling family C-terminal GWK28_05010 PF00176 SNF2 family N-terminal domain GWK28_05010 PF00271 Helicase conserved C-terminal domain GWK28_05020 PF00440 Bacterial regulatory proteins, tetR family GWK28_05025 PF00970 Oxidoreductase FAD-binding domain GWK28_05025 PF00175 Oxidoreductase NAD-binding domain GWK28_05025 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_05030 PF00487 Fatty acid desaturase GWK28_05040 PF17754 MftR C-terminal domain GWK28_05040 PF00440 Bacterial regulatory proteins, tetR family GWK28_05050 PF00202 Aminotransferase class-III GWK28_05055 PF00282 Pyridoxal-dependent decarboxylase conserved domain GWK28_05060 PF00171 Aldehyde dehydrogenase family GWK28_05065 PF01037 Lrp/AsnC ligand binding domain GWK28_05070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GWK28_05070 PF00205 Thiamine pyrophosphate enzyme, central domain GWK28_05070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GWK28_05075 PF00324 Amino acid permease GWK28_05080 PF12849 PBP superfamily domain GWK28_05085 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_05090 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_05095 PF00005 ABC transporter GWK28_05100 PF01343 Peptidase family S49 GWK28_05100 PF08496 Peptidase family S49 N-terminal GWK28_05115 PF08328 Adenylosuccinate lyase C-terminal GWK28_05115 PF00206 Lyase GWK28_05120 PF04356 Protein of unknown function (DUF489) GWK28_05130 PF13344 Haloacid dehalogenase-like hydrolase GWK28_05130 PF00293 NUDIX domain GWK28_05135 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_05140 PF07943 Penicillin-binding protein 5, C-terminal domain GWK28_05140 PF00768 D-alanyl-D-alanine carboxypeptidase GWK28_05155 PF01975 Survival protein SurE GWK28_05160 PF01551 Peptidase family M23 GWK28_05160 PF01476 LysM domain GWK28_05165 PF03466 LysR substrate binding domain GWK28_05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_05170 PF05362 Lon protease (S16) C-terminal proteolytic domain GWK28_05170 PF13654 AAA domain GWK28_05175 PF07690 Major Facilitator Superfamily GWK28_05180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GWK28_05185 PF13593 SBF-like CPA transporter family (DUF4137) GWK28_05190 PF01197 Ribosomal protein L31 GWK28_05205 PF04055 Radical SAM superfamily GWK28_05210 PF09285 Elongation factor P, C-terminal GWK28_05210 PF08207 Elongation factor P (EF-P) KOW-like domain GWK28_05210 PF01132 Elongation factor P (EF-P) OB domain GWK28_05215 PF02554 Carbon starvation protein CstA GWK28_05215 PF13722 5TM C-terminal transporter carbon starvation CstA GWK28_05220 PF04328 Selenoprotein, putative GWK28_05230 PF07517 SecA DEAD-like domain GWK28_05230 PF01043 SecA preprotein cross-linking domain GWK28_05230 PF02810 SEC-C motif GWK28_05230 PF07516 SecA Wing and Scaffold domain GWK28_05240 PF02678 Pirin GWK28_05240 PF17954 Quercetinase C-terminal cupin domain GWK28_05245 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_05250 PF13309 HTH domain GWK28_05250 PF08348 YheO-like PAS domain GWK28_05260 PF00501 AMP-binding enzyme GWK28_05260 PF13193 AMP-binding enzyme C-terminal domain GWK28_05260 PF00668 Condensation domain GWK28_05260 PF00550 Phosphopantetheine attachment site GWK28_05265 PF13193 AMP-binding enzyme C-terminal domain GWK28_05265 PF00501 AMP-binding enzyme GWK28_05265 PF00668 Condensation domain GWK28_05265 PF00975 Thioesterase domain GWK28_05265 PF00550 Phosphopantetheine attachment site GWK28_05270 PF01032 FecCD transport family GWK28_05275 PF01032 FecCD transport family GWK28_05280 PF00005 ABC transporter GWK28_05285 PF01497 Periplasmic binding protein GWK28_05290 PF00593 TonB dependent receptor GWK28_05290 PF07715 TonB-dependent Receptor Plug Domain GWK28_05295 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GWK28_05300 PF00668 Condensation domain GWK28_05300 PF00501 AMP-binding enzyme GWK28_05300 PF00550 Phosphopantetheine attachment site GWK28_05305 PF00501 AMP-binding enzyme GWK28_05305 PF13193 AMP-binding enzyme C-terminal domain GWK28_05310 PF00550 Phosphopantetheine attachment site GWK28_05310 PF00857 Isochorismatase family GWK28_05315 PF00282 Pyridoxal-dependent decarboxylase conserved domain GWK28_05325 PF00005 ABC transporter GWK28_05330 PF00005 ABC transporter GWK28_05335 PF00975 Thioesterase domain GWK28_05340 PF01648 4'-phosphopantetheinyl transferase superfamily GWK28_05340 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GWK28_05345 PF00425 chorismate binding enzyme GWK28_05355 PF01208 Uroporphyrinogen decarboxylase (URO-D) GWK28_05360 PF05675 Protein of unknown function (DUF817) GWK28_05375 PF00144 Beta-lactamase GWK28_05380 PF01227 GTP cyclohydrolase I GWK28_05385 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_05385 PF01799 [2Fe-2S] binding domain GWK28_05390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GWK28_05390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GWK28_05400 PF01713 Smr domain GWK28_05405 PF00218 Indole-3-glycerol phosphate synthase GWK28_05410 PF02885 Glycosyl transferase family, helical bundle domain GWK28_05410 PF00591 Glycosyl transferase family, a/b domain GWK28_05415 PF00593 TonB dependent receptor GWK28_05415 PF07715 TonB-dependent Receptor Plug Domain GWK28_05420 PF01433 Peptidase family M1 domain GWK28_05420 PF11838 ERAP1-like C-terminal domain GWK28_05425 PF00117 Glutamine amidotransferase class-I GWK28_05435 PF00854 POT family GWK28_05440 PF00120 Glutamine synthetase, catalytic domain GWK28_05440 PF03951 Glutamine synthetase, beta-Grasp domain GWK28_05445 PF04345 Chorismate lyase GWK28_05450 PF01040 UbiA prenyltransferase family GWK28_05485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GWK28_05485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GWK28_05490 PF01784 NIF3 (NGG1p interacting factor 3) GWK28_05495 PF13180 PDZ domain GWK28_05500 PF12627 Probable RNA and SrmB- binding site of polymerase A GWK28_05500 PF01743 Poly A polymerase head domain GWK28_05505 PF00390 Malic enzyme, N-terminal domain GWK28_05505 PF03949 Malic enzyme, NAD binding domain GWK28_05505 PF01515 Phosphate acetyl/butaryl transferase GWK28_05510 PF00990 Diguanylate cyclase, GGDEF domain GWK28_05510 PF00563 EAL domain GWK28_05510 PF03707 Bacterial signalling protein N terminal repeat GWK28_05515 PF04452 RNA methyltransferase GWK28_05520 PF02219 Methylenetetrahydrofolate reductase GWK28_05525 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GWK28_05525 PF05221 S-adenosyl-L-homocysteine hydrolase GWK28_05540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_05540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_05540 PF09317 Domain of unknown function (DUF1974) GWK28_05545 PF04055 Radical SAM superfamily GWK28_05550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GWK28_05550 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_05560 PF07690 Major Facilitator Superfamily GWK28_05570 PF00557 Metallopeptidase family M24 GWK28_05575 PF00318 Ribosomal protein S2 GWK28_05580 PF00889 Elongation factor TS GWK28_05590 PF12833 Helix-turn-helix domain GWK28_05610 PF05036 Sporulation related domain GWK28_05610 PF03330 Lytic transglycolase GWK28_05615 PF13406 Transglycosylase SLT domain GWK28_05620 PF01098 Cell cycle protein GWK28_05630 PF14489 QueF-like protein GWK28_05630 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GWK28_05635 PF01061 ABC-2 type transporter GWK28_05640 PF00005 ABC transporter GWK28_05670 PF00464 Serine hydroxymethyltransferase GWK28_05675 PF02321 Outer membrane efflux protein GWK28_05680 PF00873 AcrB/AcrD/AcrF family GWK28_05685 PF13533 Biotin-lipoyl like GWK28_05690 PF03466 LysR substrate binding domain GWK28_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_05695 PF00497 Bacterial extracellular solute-binding proteins, family 3 GWK28_05700 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_05705 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_05710 PF00005 ABC transporter GWK28_05715 PF00893 Small Multidrug Resistance protein GWK28_05720 PF00037 4Fe-4S binding domain GWK28_05725 PF01136 Peptidase family U32 GWK28_05725 PF16325 Peptidase family U32 C-terminal domain GWK28_05730 PF00155 Aminotransferase class I and II GWK28_05730 PF00392 Bacterial regulatory proteins, gntR family GWK28_05735 PF02567 Phenazine biosynthesis-like protein GWK28_05740 PF00970 Oxidoreductase FAD-binding domain GWK28_05740 PF00175 Oxidoreductase NAD-binding domain GWK28_05755 PF00437 Type II/IV secretion system protein GWK28_05755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GWK28_05765 PF00072 Response regulator receiver domain GWK28_05765 PF00486 Transcriptional regulatory protein, C terminal GWK28_05770 PF00512 His Kinase A (phospho-acceptor) domain GWK28_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_05770 PF08521 Two-component sensor kinase N-terminal GWK28_05780 PF00293 NUDIX domain GWK28_05790 PF00905 Penicillin binding protein transpeptidase domain GWK28_05790 PF14814 Bifunctional transglycosylase second domain GWK28_05790 PF00912 Transglycosylase GWK28_05795 PF01513 ATP-NAD kinase GWK28_05800 PF07023 Protein of unknown function (DUF1315) GWK28_05805 PF02885 Glycosyl transferase family, helical bundle domain GWK28_05805 PF00591 Glycosyl transferase family, a/b domain GWK28_05810 PF00375 Sodium:dicarboxylate symporter family GWK28_05815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_05815 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_05815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_05820 PF00756 Putative esterase GWK28_05825 PF00800 Prephenate dehydratase GWK28_05825 PF01817 Chorismate mutase type II GWK28_05825 PF01842 ACT domain GWK28_05830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GWK28_05840 PF07687 Peptidase dimerisation domain GWK28_05840 PF01546 Peptidase family M20/M25/M40 GWK28_05845 PF01137 RNA 3'-terminal phosphate cyclase GWK28_05845 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain GWK28_05860 PF01139 tRNA-splicing ligase RtcB GWK28_05865 PF00753 Metallo-beta-lactamase superfamily GWK28_05870 PF06956 Regulator of RNA terminal phosphate cyclase GWK28_05870 PF00158 Sigma-54 interaction domain GWK28_05880 PF03883 Peroxide stress protein YaaA GWK28_05890 PF05690 Thiazole biosynthesis protein ThiG GWK28_05900 PF04241 Protein of unknown function (DUF423) GWK28_05905 PF00140 Sigma-70 factor, region 1.2 GWK28_05905 PF04545 Sigma-70, region 4 GWK28_05905 PF04542 Sigma-70 region 2 GWK28_05915 PF00313 'Cold-shock' DNA-binding domain GWK28_05920 PF00270 DEAD/DEAH box helicase GWK28_05920 PF00271 Helicase conserved C-terminal domain GWK28_05930 PF00881 Nitroreductase family GWK28_05935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GWK28_05935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GWK28_05955 PF01180 Dihydroorotate dehydrogenase GWK28_05960 PF02674 Colicin V production protein GWK28_05965 PF00156 Phosphoribosyl transferase domain GWK28_05980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GWK28_05980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GWK28_05985 PF01435 Peptidase family M48 GWK28_05990 PF09424 Yqey-like protein GWK28_05995 PF01165 Ribosomal protein S21 GWK28_06000 PF00814 Glycoprotease family GWK28_06020 PF03793 PASTA domain GWK28_06020 PF00069 Protein kinase domain GWK28_06045 PF08479 POTRA domain, ShlB-type GWK28_06045 PF17287 POTRA domain GWK28_06045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GWK28_06055 PF00872 Transposase, Mutator family GWK28_06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_06120 PF03466 LysR substrate binding domain GWK28_06125 PF00202 Aminotransferase class-III GWK28_06130 PF00171 Aldehyde dehydrogenase family GWK28_06135 PF00324 Amino acid permease GWK28_06165 PF04076 Bacterial OB fold (BOF) protein GWK28_06200 PF00561 alpha/beta hydrolase fold GWK28_06205 PF03616 Sodium/glutamate symporter GWK28_06215 PF00392 Bacterial regulatory proteins, gntR family GWK28_06215 PF07729 FCD domain GWK28_06265 PF00872 Transposase, Mutator family GWK28_06270 PF00083 Sugar (and other) transporter GWK28_06270 PF08946 Osmosensory transporter coiled coil GWK28_06295 PF04403 Paraquat-inducible protein A GWK28_06300 PF02470 MlaD protein GWK28_06310 PF00576 HIUase/Transthyretin family GWK28_06320 PF00072 Response regulator receiver domain GWK28_06320 PF00486 Transcriptional regulatory protein, C terminal GWK28_06325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_06325 PF00512 His Kinase A (phospho-acceptor) domain GWK28_06325 PF00672 HAMP domain GWK28_06365 PF08521 Two-component sensor kinase N-terminal GWK28_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_06365 PF00512 His Kinase A (phospho-acceptor) domain GWK28_06370 PF00072 Response regulator receiver domain GWK28_06370 PF00486 Transcriptional regulatory protein, C terminal GWK28_06395 PF01177 Asp/Glu/Hydantoin racemase GWK28_06400 PF00892 EamA-like transporter family GWK28_06405 PF07995 Glucose / Sorbosone dehydrogenase GWK28_06425 PF00375 Sodium:dicarboxylate symporter family GWK28_06435 PF16123 Hydroxyacylglutathione hydrolase C-terminus GWK28_06435 PF00753 Metallo-beta-lactamase superfamily GWK28_06440 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_06445 PF09383 NIL domain GWK28_06445 PF00005 ABC transporter GWK28_06450 PF03180 NLPA lipoprotein GWK28_06455 PF02844 Phosphoribosylglycinamide synthetase, N domain GWK28_06455 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GWK28_06455 PF02843 Phosphoribosylglycinamide synthetase, C domain GWK28_06460 PF01808 AICARFT/IMPCHase bienzyme GWK28_06460 PF02142 MGS-like domain GWK28_06465 PF02954 Bacterial regulatory protein, Fis family GWK28_06485 PF13932 GidA associated domain GWK28_06485 PF01134 Glucose inhibited division protein A GWK28_06495 PF14403 Circularly permuted ATP-grasp type 2 GWK28_06505 PF08379 Bacterial transglutaminase-like N-terminal region GWK28_06505 PF01841 Transglutaminase-like superfamily GWK28_06515 PF00842 Alanine racemase, C-terminal domain GWK28_06515 PF01168 Alanine racemase, N-terminal domain GWK28_06520 PF03796 DnaB-like helicase C terminal domain GWK28_06520 PF00772 DnaB-like helicase N terminal domain GWK28_06525 PF03948 Ribosomal protein L9, C-terminal domain GWK28_06525 PF01281 Ribosomal protein L9, N-terminal domain GWK28_06530 PF01084 Ribosomal protein S18 GWK28_06535 PF01250 Ribosomal protein S6 GWK28_06540 PF01040 UbiA prenyltransferase family GWK28_06545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GWK28_06550 PF00510 Cytochrome c oxidase subunit III GWK28_06555 PF00115 Cytochrome C and Quinol oxidase polypeptide I GWK28_06560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GWK28_06560 PF06481 COX Aromatic Rich Motif GWK28_06570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GWK28_06570 PF02896 PEP-utilising enzyme, TIM barrel domain GWK28_06570 PF00391 PEP-utilising enzyme, mobile domain GWK28_06575 PF03618 Kinase/pyrophosphorylase GWK28_06585 PF14883 Hypothetical glycosyl hydrolase family 13 GWK28_06585 PF01522 Polysaccharide deacetylase GWK28_06590 PF00535 Glycosyl transferase family 2 GWK28_06595 PF13994 PgaD-like protein GWK28_06605 PF00296 Luciferase-like monooxygenase GWK28_06620 PF03466 LysR substrate binding domain GWK28_06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_06630 PF00472 RF-1 domain GWK28_06630 PF03462 PCRF domain GWK28_06635 PF17827 PrmC N-terminal domain GWK28_06635 PF13847 Methyltransferase domain GWK28_06640 PF12833 Helix-turn-helix domain GWK28_06645 PF00106 short chain dehydrogenase GWK28_06650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_06650 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_06650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_06655 PF00501 AMP-binding enzyme GWK28_06655 PF13193 AMP-binding enzyme C-terminal domain GWK28_06660 PF01613 Flavin reductase like domain GWK28_06665 PF00899 ThiF family GWK28_06670 PF03109 ABC1 family GWK28_06685 PF03814 Potassium-transporting ATPase A subunit GWK28_06695 PF02669 K+-transporting ATPase, c chain GWK28_06700 PF00512 His Kinase A (phospho-acceptor) domain GWK28_06700 PF13493 Domain of unknown function (DUF4118) GWK28_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_06700 PF02702 Osmosensitive K+ channel His kinase sensor domain GWK28_06705 PF00072 Response regulator receiver domain GWK28_06705 PF00486 Transcriptional regulatory protein, C terminal GWK28_06710 PF00120 Glutamine synthetase, catalytic domain GWK28_06720 PF03232 Ubiquinone biosynthesis protein COQ7 GWK28_06725 PF07690 Major Facilitator Superfamily GWK28_06730 PF17243 POTRA domain TamA domain 1 GWK28_06730 PF07244 Surface antigen variable number repeat GWK28_06730 PF01103 Surface antigen GWK28_06745 PF00330 Aconitase family (aconitate hydratase) GWK28_06745 PF11791 Aconitate B N-terminal domain GWK28_06745 PF06434 Aconitate hydratase 2 N-terminus GWK28_06755 PF00520 Ion transport protein GWK28_06755 PF00027 Cyclic nucleotide-binding domain GWK28_06760 PF07690 Major Facilitator Superfamily GWK28_06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_06775 PF03466 LysR substrate binding domain GWK28_06780 PF04284 Protein of unknown function (DUF441) GWK28_06790 PF01479 S4 domain GWK28_06790 PF00849 RNA pseudouridylate synthase GWK28_06805 PF00849 RNA pseudouridylate synthase GWK28_06805 PF01479 S4 domain GWK28_06810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GWK28_06815 PF08676 MutL C terminal dimerisation domain GWK28_06815 PF01119 DNA mismatch repair protein, C-terminal domain GWK28_06825 PF17209 Hfq protein GWK28_06835 PF00881 Nitroreductase family GWK28_06845 PF00149 Calcineurin-like phosphoesterase GWK28_06850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GWK28_06855 PF00749 tRNA synthetases class I (E and Q), catalytic domain GWK28_06855 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GWK28_06860 PF00117 Glutamine amidotransferase class-I GWK28_06860 PF02540 NAD synthase GWK28_06860 PF00958 GMP synthase C terminal domain GWK28_06865 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GWK28_06870 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GWK28_06875 PF13520 Amino acid permease GWK28_06880 PF00171 Aldehyde dehydrogenase family GWK28_06895 PF00465 Iron-containing alcohol dehydrogenase GWK28_06900 PF14493 Helix-turn-helix domain GWK28_06900 PF05970 PIF1-like helicase GWK28_06910 PF06445 GyrI-like small molecule binding domain GWK28_06915 PF02110 Hydroxyethylthiazole kinase family GWK28_06930 PF11940 Domain of unknown function (DUF3458) Ig-like fold GWK28_06930 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GWK28_06930 PF01433 Peptidase family M1 domain GWK28_06950 PF01817 Chorismate mutase type II GWK28_06955 PF01037 Lrp/AsnC ligand binding domain GWK28_06965 PF00440 Bacterial regulatory proteins, tetR family GWK28_06970 PF07715 TonB-dependent Receptor Plug Domain GWK28_06970 PF00593 TonB dependent receptor GWK28_06975 PF00924 Mechanosensitive ion channel GWK28_07005 PF07715 TonB-dependent Receptor Plug Domain GWK28_07005 PF00593 TonB dependent receptor GWK28_07025 PF12848 ABC transporter GWK28_07025 PF00005 ABC transporter GWK28_07030 PF00582 Universal stress protein family GWK28_07045 PF13737 Transposase DDE domain GWK28_07060 PF00690 Cation transporter/ATPase, N-terminus GWK28_07060 PF00689 Cation transporting ATPase, C-terminus GWK28_07065 PF02308 MgtC family GWK28_07070 PF03594 Benzoate membrane transport protein GWK28_07075 PF01037 Lrp/AsnC ligand binding domain GWK28_07080 PF01810 LysE type translocator GWK28_07085 PF00923 Transaldolase/Fructose-6-phosphate aldolase GWK28_07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_07090 PF03466 LysR substrate binding domain GWK28_07100 PF00108 Thiolase, N-terminal domain GWK28_07100 PF02803 Thiolase, C-terminal domain GWK28_07110 PF01575 MaoC like domain GWK28_07115 PF00144 Beta-lactamase GWK28_07125 PF07690 Major Facilitator Superfamily GWK28_07140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GWK28_07140 PF12170 DNA polymerase III tau subunit V interacting with alpha GWK28_07140 PF12169 DNA polymerase III subunits gamma and tau domain III GWK28_07150 PF04185 Phosphoesterase family GWK28_07150 PF05506 Domain of unknown function (DUF756) GWK28_07155 PF03061 Thioesterase superfamily GWK28_07160 PF00465 Iron-containing alcohol dehydrogenase GWK28_07170 PF01451 Low molecular weight phosphotyrosine protein phosphatase GWK28_07175 PF01565 FAD binding domain GWK28_07175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GWK28_07190 PF01645 Conserved region in glutamate synthase GWK28_07220 PF01695 IstB-like ATP binding protein GWK28_07400 PF13438 Domain of unknown function (DUF4113) GWK28_07400 PF00817 impB/mucB/samB family GWK28_07400 PF11799 impB/mucB/samB family C-terminal domain GWK28_07405 PF00717 Peptidase S24-like GWK28_07435 PF12832 MFS_1 like family GWK28_07445 PF02785 Biotin carboxylase C-terminal domain GWK28_07445 PF00289 Biotin carboxylase, N-terminal domain GWK28_07445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_07450 PF00364 Biotin-requiring enzyme GWK28_07455 PF01220 Dehydroquinase class II GWK28_07465 PF00872 Transposase, Mutator family GWK28_07495 PF00580 UvrD/REP helicase N-terminal domain GWK28_07495 PF13361 UvrD-like helicase C-terminal domain GWK28_07495 PF12705 PD-(D/E)XK nuclease superfamily GWK28_07500 PF02463 RecF/RecN/SMC N terminal domain GWK28_07500 PF06470 SMC proteins Flexible Hinge Domain GWK28_07505 PF00817 impB/mucB/samB family GWK28_07505 PF13438 Domain of unknown function (DUF4113) GWK28_07505 PF11799 impB/mucB/samB family C-terminal domain GWK28_07515 PF00005 ABC transporter GWK28_07520 PF00072 Response regulator receiver domain GWK28_07520 PF00486 Transcriptional regulatory protein, C terminal GWK28_07530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GWK28_07530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GWK28_07530 PF18267 Rubredoxin NAD+ reductase C-terminal domain GWK28_07530 PF13806 Rieske-like [2Fe-2S] domain GWK28_07530 PF04324 BFD-like [2Fe-2S] binding domain GWK28_07530 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_07535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GWK28_07535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GWK28_07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_07535 PF18267 Rubredoxin NAD+ reductase C-terminal domain GWK28_07535 PF04324 BFD-like [2Fe-2S] binding domain GWK28_07540 PF01568 Molydopterin dinucleotide binding domain GWK28_07540 PF00384 Molybdopterin oxidoreductase GWK28_07540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GWK28_07540 PF04324 BFD-like [2Fe-2S] binding domain GWK28_07545 PF12804 MobA-like NTP transferase domain GWK28_07550 PF01568 Molydopterin dinucleotide binding domain GWK28_07550 PF00384 Molybdopterin oxidoreductase GWK28_07550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GWK28_07555 PF06463 Molybdenum Cofactor Synthesis C GWK28_07555 PF04055 Radical SAM superfamily GWK28_07565 PF02391 MoaE protein GWK28_07570 PF00994 Probable molybdopterin binding domain GWK28_07570 PF01967 MoaC family GWK28_07575 PF03454 MoeA C-terminal region (domain IV) GWK28_07575 PF03453 MoeA N-terminal region (domain I and II) GWK28_07575 PF00994 Probable molybdopterin binding domain GWK28_07580 PF01638 HxlR-like helix-turn-helix GWK28_07585 PF00155 Aminotransferase class I and II GWK28_07585 PF00392 Bacterial regulatory proteins, gntR family GWK28_07590 PF00892 EamA-like transporter family GWK28_07610 PF02635 DsrE/DsrF-like family GWK28_07615 PF16363 GDP-mannose 4,6 dehydratase GWK28_07620 PF00206 Lyase GWK28_07620 PF10415 Fumarase C C-terminus GWK28_07640 PF01266 FAD dependent oxidoreductase GWK28_07650 PF02542 YgbB family GWK28_07660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GWK28_07660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GWK28_07665 PF00440 Bacterial regulatory proteins, tetR family GWK28_07670 PF00158 Sigma-54 interaction domain GWK28_07670 PF00072 Response regulator receiver domain GWK28_07670 PF02954 Bacterial regulatory protein, Fis family GWK28_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_07675 PF00512 His Kinase A (phospho-acceptor) domain GWK28_07675 PF00989 PAS fold GWK28_07685 PF00919 Uncharacterized protein family UPF0004 GWK28_07685 PF18693 TRAM domain GWK28_07685 PF04055 Radical SAM superfamily GWK28_07690 PF00696 Amino acid kinase family GWK28_07695 PF01765 Ribosome recycling factor GWK28_07700 PF01255 Putative undecaprenyl diphosphate synthase GWK28_07710 PF13288 DXP reductoisomerase C-terminal domain GWK28_07710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GWK28_07710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GWK28_07715 PF13180 PDZ domain GWK28_07715 PF17820 PDZ domain GWK28_07715 PF02163 Peptidase family M50 GWK28_07720 PF01103 Surface antigen GWK28_07720 PF07244 Surface antigen variable number repeat GWK28_07730 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_07730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GWK28_07735 PF07977 FabA-like domain GWK28_07740 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_07740 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GWK28_07755 PF02631 RecX family GWK28_07760 PF00154 recA bacterial DNA recombination protein GWK28_07765 PF01479 S4 domain GWK28_07770 PF13419 Haloacid dehalogenase-like hydrolase GWK28_07795 PF01037 Lrp/AsnC ligand binding domain GWK28_07800 PF00266 Aminotransferase class-V GWK28_07805 PF00324 Amino acid permease GWK28_07815 PF05922 Peptidase inhibitor I9 GWK28_07815 PF00082 Subtilase family GWK28_07820 PF01740 STAS domain GWK28_07820 PF00916 Sulfate permease family GWK28_07825 PF02586 SOS response associated peptidase (SRAP) GWK28_07830 PF07995 Glucose / Sorbosone dehydrogenase GWK28_07840 PF00990 Diguanylate cyclase, GGDEF domain GWK28_07840 PF03707 Bacterial signalling protein N terminal repeat GWK28_07840 PF00563 EAL domain GWK28_07855 PF02378 Phosphotransferase system, EIIC GWK28_07855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GWK28_07860 PF00294 pfkB family carbohydrate kinase GWK28_07865 PF02896 PEP-utilising enzyme, TIM barrel domain GWK28_07865 PF00391 PEP-utilising enzyme, mobile domain GWK28_07865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GWK28_07865 PF05524 PEP-utilising enzyme, N-terminal GWK28_07865 PF00381 PTS HPr component phosphorylation site GWK28_07890 PF05525 Branched-chain amino acid transport protein GWK28_07895 PF00557 Metallopeptidase family M24 GWK28_07900 PF03466 LysR substrate binding domain GWK28_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_07910 PF00462 Glutaredoxin GWK28_07915 PF00202 Aminotransferase class-III GWK28_07920 PF00478 IMP dehydrogenase / GMP reductase domain GWK28_07920 PF00571 CBS domain GWK28_07945 PF02881 SRP54-type protein, helical bundle domain GWK28_07945 PF00448 SRP54-type protein, GTPase domain GWK28_07955 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GWK28_07965 PF08173 Membrane bound YbgT-like protein GWK28_07970 PF02322 Cytochrome bd terminal oxidase subunit II GWK28_07975 PF01654 Cytochrome bd terminal oxidase subunit I GWK28_07985 PF07290 Protein of unknown function (DUF1449) GWK28_07995 PF00294 pfkB family carbohydrate kinase GWK28_08000 PF07715 TonB-dependent Receptor Plug Domain GWK28_08000 PF00593 TonB dependent receptor GWK28_08005 PF00675 Insulinase (Peptidase family M16) GWK28_08005 PF05193 Peptidase M16 inactive domain GWK28_08005 PF08367 Peptidase M16C associated GWK28_08010 PF02253 Phospholipase A1 GWK28_08015 PF02386 Cation transport protein GWK28_08020 PF02254 TrkA-N domain GWK28_08020 PF02080 TrkA-C domain GWK28_08025 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_08025 PF00585 C-terminal regulatory domain of Threonine dehydratase GWK28_08030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GWK28_08045 PF02774 Semialdehyde dehydrogenase, dimerisation domain GWK28_08045 PF01118 Semialdehyde dehydrogenase, NAD binding domain GWK28_08055 PF02617 ATP-dependent Clp protease adaptor protein ClpS GWK28_08060 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_08060 PF10431 C-terminal, D2-small domain, of ClpB protein GWK28_08060 PF02861 Clp amino terminal domain, pathogenicity island component GWK28_08060 PF17871 AAA lid domain GWK28_08060 PF07724 AAA domain (Cdc48 subfamily) GWK28_08065 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GWK28_08070 PF00793 DAHP synthetase I family GWK28_08085 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_08085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_08115 PF00117 Glutamine amidotransferase class-I GWK28_08115 PF06418 CTP synthase N-terminus GWK28_08120 PF00793 DAHP synthetase I family GWK28_08125 PF00113 Enolase, C-terminal TIM barrel domain GWK28_08125 PF03952 Enolase, N-terminal domain GWK28_08130 PF04239 Protein of unknown function (DUF421) GWK28_08135 PF04977 Septum formation initiator GWK28_08140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GWK28_08145 PF01144 Coenzyme A transferase GWK28_08150 PF01144 Coenzyme A transferase GWK28_08155 PF02803 Thiolase, C-terminal domain GWK28_08155 PF00108 Thiolase, N-terminal domain GWK28_08160 PF00206 Lyase GWK28_08160 PF10397 Adenylosuccinate lyase C-terminus GWK28_08165 PF00561 alpha/beta hydrolase fold GWK28_08170 PF07690 Major Facilitator Superfamily GWK28_08175 PF02627 Carboxymuconolactone decarboxylase family GWK28_08180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GWK28_08180 PF00775 Dioxygenase GWK28_08185 PF00775 Dioxygenase GWK28_08190 PF01487 Type I 3-dehydroquinase GWK28_08195 PF05048 Periplasmic copper-binding protein (NosD) GWK28_08200 PF04966 Carbohydrate-selective porin, OprB family GWK28_08215 PF04143 Sulphur transport GWK28_08225 PF00753 Metallo-beta-lactamase superfamily GWK28_08230 PF01614 Bacterial transcriptional regulator GWK28_08230 PF09339 IclR helix-turn-helix domain GWK28_08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08235 PF03466 LysR substrate binding domain GWK28_08240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_08240 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_08240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_08255 PF00106 short chain dehydrogenase GWK28_08265 PF07690 Major Facilitator Superfamily GWK28_08275 PF01425 Amidase GWK28_08280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GWK28_08295 PF00355 Rieske [2Fe-2S] domain GWK28_08295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GWK28_08310 PF00175 Oxidoreductase NAD-binding domain GWK28_08310 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_08315 PF01613 Flavin reductase like domain GWK28_08320 PF12833 Helix-turn-helix domain GWK28_08320 PF02311 AraC-like ligand binding domain GWK28_08325 PF02728 Copper amine oxidase, N3 domain GWK28_08325 PF01179 Copper amine oxidase, enzyme domain GWK28_08325 PF07833 Copper amine oxidase N-terminal domain GWK28_08325 PF02727 Copper amine oxidase, N2 domain GWK28_08335 PF00171 Aldehyde dehydrogenase family GWK28_08340 PF12146 Serine aminopeptidase, S33 GWK28_08345 PF00108 Thiolase, N-terminal domain GWK28_08345 PF02803 Thiolase, C-terminal domain GWK28_08350 PF01144 Coenzyme A transferase GWK28_08355 PF01144 Coenzyme A transferase GWK28_08360 PF00775 Dioxygenase GWK28_08360 PF04444 Catechol dioxygenase N terminus GWK28_08365 PF02426 Muconolactone delta-isomerase GWK28_08370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GWK28_08370 PF13378 Enolase C-terminal domain-like GWK28_08375 PF03466 LysR substrate binding domain GWK28_08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08385 PF00392 Bacterial regulatory proteins, gntR family GWK28_08385 PF07729 FCD domain GWK28_08390 PF00920 Dehydratase family GWK28_08395 PF07690 Major Facilitator Superfamily GWK28_08405 PF00171 Aldehyde dehydrogenase family GWK28_08415 PF00561 alpha/beta hydrolase fold GWK28_08420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_08420 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_08425 PF00106 short chain dehydrogenase GWK28_08430 PF01872 RibD C-terminal domain GWK28_08440 PF13411 MerR HTH family regulatory protein GWK28_08450 PF12706 Beta-lactamase superfamily domain GWK28_08455 PF00440 Bacterial regulatory proteins, tetR family GWK28_08455 PF08359 YsiA-like protein, C-terminal region GWK28_08485 PF07690 Major Facilitator Superfamily GWK28_08490 PF04909 Amidohydrolase GWK28_08500 PF00392 Bacterial regulatory proteins, gntR family GWK28_08500 PF07702 UTRA domain GWK28_08505 PF08450 SMP-30/Gluconolactonase/LRE-like region GWK28_08515 PF03466 LysR substrate binding domain GWK28_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_08530 PF00529 HlyD membrane-fusion protein of T1SS GWK28_08545 PF00171 Aldehyde dehydrogenase family GWK28_08550 PF00920 Dehydratase family GWK28_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08560 PF03466 LysR substrate binding domain GWK28_08565 PF01370 NAD dependent epimerase/dehydratase family GWK28_08570 PF07690 Major Facilitator Superfamily GWK28_08575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GWK28_08575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GWK28_08580 PF12833 Helix-turn-helix domain GWK28_08580 PF06719 AraC-type transcriptional regulator N-terminus GWK28_08595 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_08595 PF00107 Zinc-binding dehydrogenase GWK28_08605 PF01032 FecCD transport family GWK28_08610 PF00005 ABC transporter GWK28_08630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GWK28_08630 PF14572 Phosphoribosyl synthetase-associated domain GWK28_08635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GWK28_08650 PF13533 Biotin-lipoyl like GWK28_08655 PF07690 Major Facilitator Superfamily GWK28_08680 PF01975 Survival protein SurE GWK28_08690 PF13291 ACT domain GWK28_08690 PF04607 Region found in RelA / SpoT proteins GWK28_08690 PF02824 TGS domain GWK28_08710 PF13673 Acetyltransferase (GNAT) domain GWK28_08735 PF00873 AcrB/AcrD/AcrF family GWK28_08740 PF17760 UvrA interaction domain GWK28_08740 PF17755 UvrA DNA-binding domain GWK28_08740 PF00005 ABC transporter GWK28_08790 PF00199 Catalase GWK28_08805 PF13091 PLD-like domain GWK28_08825 PF01244 Membrane dipeptidase (Peptidase family M19) GWK28_08830 PF13186 Iron-sulfur cluster-binding domain GWK28_08830 PF04055 Radical SAM superfamily GWK28_08835 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GWK28_08840 PF03070 TENA/THI-4/PQQC family GWK28_08845 PF12706 Beta-lactamase superfamily domain GWK28_08850 PF08042 PqqA family GWK28_08855 PF02503 Polyphosphate kinase middle domain GWK28_08855 PF13089 Polyphosphate kinase N-terminal domain GWK28_08855 PF17941 Polyphosphate kinase C-terminal domain 1 GWK28_08855 PF13090 Polyphosphate kinase C-terminal domain 2 GWK28_08860 PF00149 Calcineurin-like phosphoesterase GWK28_08870 PF00857 Isochorismatase family GWK28_08870 PF00550 Phosphopantetheine attachment site GWK28_08875 PF00106 short chain dehydrogenase GWK28_08880 PF00005 ABC transporter GWK28_08880 PF03459 TOBE domain GWK28_08885 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08895 PF03459 TOBE domain GWK28_08900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GWK28_08900 PF00355 Rieske [2Fe-2S] domain GWK28_08905 PF00866 Ring hydroxylating beta subunit GWK28_08910 PF00970 Oxidoreductase FAD-binding domain GWK28_08910 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_08910 PF00175 Oxidoreductase NAD-binding domain GWK28_08915 PF14525 AraC-binding-like domain GWK28_08915 PF12833 Helix-turn-helix domain GWK28_08925 PF01613 Flavin reductase like domain GWK28_08940 PF01738 Dienelactone hydrolase family GWK28_08945 PF07690 Major Facilitator Superfamily GWK28_08950 PF12833 Helix-turn-helix domain GWK28_08950 PF06719 AraC-type transcriptional regulator N-terminus GWK28_08970 PF00440 Bacterial regulatory proteins, tetR family GWK28_08990 PF03466 LysR substrate binding domain GWK28_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_08995 PF01144 Coenzyme A transferase GWK28_09000 PF01144 Coenzyme A transferase GWK28_09005 PF02667 Short chain fatty acid transporter GWK28_09010 PF02803 Thiolase, C-terminal domain GWK28_09010 PF00108 Thiolase, N-terminal domain GWK28_09015 PF03466 LysR substrate binding domain GWK28_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_09020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_09020 PF03466 LysR substrate binding domain GWK28_09035 PF00206 Lyase GWK28_09035 PF10415 Fumarase C C-terminus GWK28_09040 PF07715 TonB-dependent Receptor Plug Domain GWK28_09040 PF00593 TonB dependent receptor GWK28_09060 PF00005 ABC transporter GWK28_09065 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_09070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GWK28_09085 PF07702 UTRA domain GWK28_09085 PF00392 Bacterial regulatory proteins, gntR family GWK28_09090 PF02417 Chromate transporter GWK28_09095 PF02525 Flavodoxin-like fold GWK28_09100 PF01638 HxlR-like helix-turn-helix GWK28_09105 PF06445 GyrI-like small molecule binding domain GWK28_09105 PF12833 Helix-turn-helix domain GWK28_09120 PF01925 Sulfite exporter TauE/SafE GWK28_09125 PF04273 Putative phosphatase (DUF442) GWK28_09125 PF00753 Metallo-beta-lactamase superfamily GWK28_09130 PF04273 Putative phosphatase (DUF442) GWK28_09130 PF00753 Metallo-beta-lactamase superfamily GWK28_09135 PF00158 Sigma-54 interaction domain GWK28_09135 PF00072 Response regulator receiver domain GWK28_09135 PF02954 Bacterial regulatory protein, Fis family GWK28_09140 PF01062 Bestrophin, RFP-TM, chloride channel GWK28_09145 PF00107 Zinc-binding dehydrogenase GWK28_09145 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_09150 PF00106 short chain dehydrogenase GWK28_09155 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_09155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GWK28_09160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GWK28_09160 PF02817 e3 binding domain GWK28_09160 PF00364 Biotin-requiring enzyme GWK28_09165 PF02779 Transketolase, pyrimidine binding domain GWK28_09165 PF02780 Transketolase, C-terminal domain GWK28_09170 PF00676 Dehydrogenase E1 component GWK28_09175 PF04055 Radical SAM superfamily GWK28_09190 PF08448 PAS fold GWK28_09190 PF00990 Diguanylate cyclase, GGDEF domain GWK28_09195 PF01264 Chorismate synthase GWK28_09200 PF05175 Methyltransferase small domain GWK28_09205 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_09215 PF17862 AAA+ lid domain GWK28_09215 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_09215 PF01434 Peptidase family M41 GWK28_09225 PF05166 YcgL domain GWK28_09245 PF01612 3'-5' exonuclease GWK28_09245 PF00570 HRDC domain GWK28_09250 PF13662 Toprim domain GWK28_09250 PF02132 RecR protein GWK28_09255 PF02575 YbaB/EbfC DNA-binding family GWK28_09265 PF01053 Cys/Met metabolism PLP-dependent enzyme GWK28_09270 PF00561 alpha/beta hydrolase fold GWK28_09275 PF08241 Methyltransferase domain GWK28_09305 PF01230 HIT domain GWK28_09340 PF00005 ABC transporter GWK28_09355 PF02684 Lipid-A-disaccharide synthetase GWK28_09360 PF00593 TonB dependent receptor GWK28_09360 PF07715 TonB-dependent Receptor Plug Domain GWK28_09380 PF01925 Sulfite exporter TauE/SafE GWK28_09385 PF00793 DAHP synthetase I family GWK28_09390 PF02654 Cobalamin-5-phosphate synthase GWK28_09400 PF00300 Histidine phosphatase superfamily (branch 1) GWK28_09405 PF02277 Phosphoribosyltransferase GWK28_09410 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GWK28_09420 PF13419 Haloacid dehalogenase-like hydrolase GWK28_09445 PF00593 TonB dependent receptor GWK28_09445 PF07715 TonB-dependent Receptor Plug Domain GWK28_09450 PF03737 Aldolase/RraA GWK28_09460 PF06276 Ferric iron reductase FhuF-like transporter GWK28_09460 PF04183 IucA / IucC family GWK28_09465 PF04183 IucA / IucC family GWK28_09465 PF06276 Ferric iron reductase FhuF-like transporter GWK28_09470 PF07690 Major Facilitator Superfamily GWK28_09475 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GWK28_09480 PF06276 Ferric iron reductase FhuF-like transporter GWK28_09480 PF04183 IucA / IucC family GWK28_09485 PF04073 Aminoacyl-tRNA editing domain GWK28_09495 PF03109 ABC1 family GWK28_09500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_09500 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_09505 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_09505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_09505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_09510 PF00487 Fatty acid desaturase GWK28_09515 PF12852 Cupin GWK28_09515 PF12833 Helix-turn-helix domain GWK28_09520 PF09312 SurA N-terminal domain GWK28_09520 PF00639 PPIC-type PPIASE domain GWK28_09525 PF00216 Bacterial DNA-binding protein GWK28_09540 PF02082 Transcriptional regulator GWK28_09545 PF00266 Aminotransferase class-V GWK28_09550 PF01592 NifU-like N terminal domain GWK28_09555 PF01521 Iron-sulphur cluster biosynthesis GWK28_09560 PF07743 HSCB C-terminal oligomerisation domain GWK28_09560 PF00226 DnaJ domain GWK28_09565 PF00012 Hsp70 protein GWK28_09570 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_09575 PF00211 Adenylate and Guanylate cyclase catalytic domain GWK28_09585 PF17757 UvrB interaction domain GWK28_09585 PF03461 TRCF domain GWK28_09585 PF00271 Helicase conserved C-terminal domain GWK28_09585 PF00270 DEAD/DEAH box helicase GWK28_09585 PF02559 CarD-like/TRCF domain GWK28_09605 PF03737 Aldolase/RraA GWK28_09610 PF13460 NAD(P)H-binding GWK28_09615 PF01649 Ribosomal protein S20 GWK28_09625 PF00459 Inositol monophosphatase family GWK28_09640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GWK28_09640 PF00005 ABC transporter GWK28_09645 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_09650 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_09655 PF01432 Peptidase family M3 GWK28_09675 PF00593 TonB dependent receptor GWK28_09675 PF07715 TonB-dependent Receptor Plug Domain GWK28_09685 PF01618 MotA/TolQ/ExbB proton channel family GWK28_09690 PF02472 Biopolymer transport protein ExbD/TolR GWK28_09695 PF02472 Biopolymer transport protein ExbD/TolR GWK28_09705 PF01274 Malate synthase GWK28_09710 PF03969 AFG1-like ATPase GWK28_09720 PF00743 Flavin-binding monooxygenase-like GWK28_09730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GWK28_09740 PF00216 Bacterial DNA-binding protein GWK28_09745 PF00575 S1 RNA binding domain GWK28_09750 PF02224 Cytidylate kinase GWK28_09760 PF14437 MafB19-like deaminase GWK28_09770 PF03167 Uracil DNA glycosylase superfamily GWK28_09780 PF03934 Type II secretion system (T2SS), protein K GWK28_09785 PF07963 Prokaryotic N-terminal methylation motif GWK28_09785 PF11612 Type II secretion system (T2SS), protein J GWK28_09790 PF07963 Prokaryotic N-terminal methylation motif GWK28_09790 PF02501 Type II secretion system (T2SS), protein I GWK28_09805 PF01026 TatD related DNase GWK28_09815 PF09115 DNA polymerase III, delta subunit, C terminal GWK28_09820 PF02348 Cytidylyltransferase GWK28_09825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GWK28_09830 PF00005 ABC transporter GWK28_09830 PF00664 ABC transporter transmembrane region GWK28_09840 PF01618 MotA/TolQ/ExbB proton channel family GWK28_09845 PF02195 ParB-like nuclease domain GWK28_09845 PF17762 HTH domain found in ParB protein GWK28_09850 PF13614 AAA domain GWK28_09855 PF02527 rRNA small subunit methyltransferase G GWK28_09860 PF00483 Nucleotidyl transferase GWK28_09865 PF01636 Phosphotransferase enzyme family GWK28_09870 PF04453 LPS transport system D GWK28_09870 PF03968 OstA-like protein GWK28_09875 PF00639 PPIC-type PPIASE domain GWK28_09875 PF09312 SurA N-terminal domain GWK28_09880 PF01116 Fructose-bisphosphate aldolase class-II GWK28_09890 PF00162 Phosphoglycerate kinase GWK28_09900 PF02545 Maf-like protein GWK28_09905 PF08007 Cupin superfamily protein GWK28_09920 PF00375 Sodium:dicarboxylate symporter family GWK28_09925 PF06912 Protein of unknown function (DUF1275) GWK28_09930 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GWK28_09935 PF00005 ABC transporter GWK28_09935 PF00664 ABC transporter transmembrane region GWK28_09945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GWK28_09945 PF12833 Helix-turn-helix domain GWK28_09950 PF01597 Glycine cleavage H-protein GWK28_09955 PF02146 Sir2 family GWK28_09960 PF00474 Sodium:solute symporter family GWK28_09965 PF01037 Lrp/AsnC ligand binding domain GWK28_09970 PF14850 DNA-binding domain of Proline dehydrogenase GWK28_09970 PF01619 Proline dehydrogenase GWK28_09970 PF00171 Aldehyde dehydrogenase family GWK28_09970 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GWK28_09975 PF04229 GrpB protein GWK28_09980 PF05958 tRNA (Uracil-5-)-methyltransferase GWK28_09990 PF09992 Phosphodiester glycosidase GWK28_10000 PF04264 YceI-like domain GWK28_10010 PF00456 Transketolase, thiamine diphosphate binding domain GWK28_10010 PF02780 Transketolase, C-terminal domain GWK28_10010 PF02779 Transketolase, pyrimidine binding domain GWK28_10015 PF02773 S-adenosylmethionine synthetase, C-terminal domain GWK28_10015 PF02772 S-adenosylmethionine synthetase, central domain GWK28_10015 PF00438 S-adenosylmethionine synthetase, N-terminal domain GWK28_10035 PF00905 Penicillin binding protein transpeptidase domain GWK28_10050 PF02075 Crossover junction endodeoxyribonuclease RuvC GWK28_10055 PF03853 YjeF-related protein N-terminus GWK28_10055 PF01256 Carbohydrate kinase GWK28_10060 PF08331 Domain of unknown function (DUF1730) GWK28_10065 PF04055 Radical SAM superfamily GWK28_10065 PF06968 Biotin and Thiamin Synthesis associated domain GWK28_10080 PF16970 Type-1 fimbrial protein, A GWK28_10085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GWK28_10085 PF02753 Pili assembly chaperone PapD, C-terminal domain GWK28_10120 PF00892 EamA-like transporter family GWK28_10135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GWK28_10145 PF03466 LysR substrate binding domain GWK28_10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10165 PF00440 Bacterial regulatory proteins, tetR family GWK28_10175 PF01709 Transcriptional regulator GWK28_10180 PF01037 Lrp/AsnC ligand binding domain GWK28_10195 PF00005 ABC transporter GWK28_10200 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10205 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_10220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GWK28_10230 PF00296 Luciferase-like monooxygenase GWK28_10235 PF03180 NLPA lipoprotein GWK28_10240 PF03180 NLPA lipoprotein GWK28_10245 PF00005 ABC transporter GWK28_10245 PF09383 NIL domain GWK28_10250 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10255 PF06071 Protein of unknown function (DUF933) GWK28_10255 PF01926 50S ribosome-binding GTPase GWK28_10280 PF03591 AzlC protein GWK28_10285 PF05437 Branched-chain amino acid transport protein (AzlD) GWK28_10295 PF02222 ATP-grasp domain GWK28_10300 PF01909 Nucleotidyltransferase domain GWK28_10300 PF08335 GlnD PII-uridylyltransferase GWK28_10300 PF01966 HD domain GWK28_10305 PF00155 Aminotransferase class I and II GWK28_10315 PF12833 Helix-turn-helix domain GWK28_10315 PF12852 Cupin GWK28_10320 PF00255 Glutathione peroxidase GWK28_10325 PF01641 SelR domain GWK28_10330 PF00155 Aminotransferase class I and II GWK28_10335 PF00375 Sodium:dicarboxylate symporter family GWK28_10340 PF00710 Asparaginase, N-terminal GWK28_10340 PF17763 Glutaminase/Asparaginase C-terminal domain GWK28_10345 PF02811 PHP domain GWK28_10345 PF14579 Helix-hairpin-helix motif GWK28_10345 PF01336 OB-fold nucleic acid binding domain GWK28_10345 PF07733 Bacterial DNA polymerase III alpha NTPase domain GWK28_10345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GWK28_10350 PF00588 SpoU rRNA Methylase family GWK28_10355 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_10370 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_10370 PF13192 Thioredoxin domain GWK28_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10385 PF03466 LysR substrate binding domain GWK28_10390 PF01758 Sodium Bile acid symporter family GWK28_10395 PF01022 Bacterial regulatory protein, arsR family GWK28_10400 PF03960 ArsC family GWK28_10410 PF01979 Amidohydrolase family GWK28_10410 PF13382 Adenine deaminase C-terminal domain GWK28_10425 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10430 PF00005 ABC transporter GWK28_10435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GWK28_10445 PF00083 Sugar (and other) transporter GWK28_10450 PF00296 Luciferase-like monooxygenase GWK28_10465 PF01654 Cytochrome bd terminal oxidase subunit I GWK28_10470 PF02322 Cytochrome bd terminal oxidase subunit II GWK28_10480 PF00392 Bacterial regulatory proteins, gntR family GWK28_10480 PF00155 Aminotransferase class I and II GWK28_10485 PF03466 LysR substrate binding domain GWK28_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10500 PF00698 Acyl transferase domain GWK28_10505 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG GWK28_10515 PF01039 Carboxyl transferase domain GWK28_10520 PF06857 Malonate decarboxylase delta subunit (MdcD) GWK28_10525 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GWK28_10530 PF16957 Malonate decarboxylase, alpha subunit, transporter GWK28_10535 PF00106 short chain dehydrogenase GWK28_10555 PF00392 Bacterial regulatory proteins, gntR family GWK28_10560 PF04172 LrgB-like family GWK28_10565 PF03788 LrgA family GWK28_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10570 PF03466 LysR substrate binding domain GWK28_10575 PF14834 Glutathione S-transferase, C-terminal domain GWK28_10575 PF02798 Glutathione S-transferase, N-terminal domain GWK28_10580 PF02798 Glutathione S-transferase, N-terminal domain GWK28_10585 PF03466 LysR substrate binding domain GWK28_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10595 PF00581 Rhodanese-like domain GWK28_10600 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_10610 PF00266 Aminotransferase class-V GWK28_10615 PF01810 LysE type translocator GWK28_10620 PF03466 LysR substrate binding domain GWK28_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10625 PF00497 Bacterial extracellular solute-binding proteins, family 3 GWK28_10630 PF00497 Bacterial extracellular solute-binding proteins, family 3 GWK28_10640 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10645 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10660 PF00072 Response regulator receiver domain GWK28_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_10665 PF00072 Response regulator receiver domain GWK28_10665 PF00512 His Kinase A (phospho-acceptor) domain GWK28_10665 PF09308 LuxQ, periplasmic GWK28_10675 PF01037 Lrp/AsnC ligand binding domain GWK28_10675 PF13404 AsnC-type helix-turn-helix domain GWK28_10685 PF00717 Peptidase S24-like GWK28_10710 PF00199 Catalase GWK28_10710 PF06628 Catalase-related immune-responsive GWK28_10710 PF18011 C-terminal domain found in long catalases GWK28_10720 PF00994 Probable molybdopterin binding domain GWK28_10720 PF02464 Competence-damaged protein GWK28_10720 PF18146 Damage-inducible protein CinA KH domain GWK28_10755 PF03466 LysR substrate binding domain GWK28_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10775 PF13193 AMP-binding enzyme C-terminal domain GWK28_10775 PF00501 AMP-binding enzyme GWK28_10780 PF00440 Bacterial regulatory proteins, tetR family GWK28_10785 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_10785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_10790 PF01039 Carboxyl transferase domain GWK28_10795 PF00378 Enoyl-CoA hydratase/isomerase GWK28_10800 PF18140 Propionyl-coenzyme A carboxylase BT domain GWK28_10800 PF02785 Biotin carboxylase C-terminal domain GWK28_10800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_10800 PF00364 Biotin-requiring enzyme GWK28_10800 PF00289 Biotin carboxylase, N-terminal domain GWK28_10805 PF00682 HMGL-like GWK28_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10810 PF03466 LysR substrate binding domain GWK28_10825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_10825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_10825 PF12806 Acetyl-CoA dehydrogenase C-terminal like GWK28_10825 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_10835 PF07690 Major Facilitator Superfamily GWK28_10845 PF01144 Coenzyme A transferase GWK28_10850 PF01144 Coenzyme A transferase GWK28_10855 PF07690 Major Facilitator Superfamily GWK28_10860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_10860 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_10860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_10865 PF00378 Enoyl-CoA hydratase/isomerase GWK28_10875 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GWK28_10875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GWK28_10875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GWK28_10880 PF02803 Thiolase, C-terminal domain GWK28_10880 PF00108 Thiolase, N-terminal domain GWK28_10885 PF09339 IclR helix-turn-helix domain GWK28_10890 PF07690 Major Facilitator Superfamily GWK28_10895 PF03060 Nitronate monooxygenase GWK28_10900 PF00378 Enoyl-CoA hydratase/isomerase GWK28_10905 PF09339 IclR helix-turn-helix domain GWK28_10910 PF02515 CoA-transferase family III GWK28_10915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_10915 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_10915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_10920 PF07690 Major Facilitator Superfamily GWK28_10925 PF13419 Haloacid dehalogenase-like hydrolase GWK28_10930 PF00266 Aminotransferase class-V GWK28_10935 PF01266 FAD dependent oxidoreductase GWK28_10940 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_10945 PF08402 TOBE domain GWK28_10945 PF00005 ABC transporter GWK28_10955 PF07702 UTRA domain GWK28_10955 PF00392 Bacterial regulatory proteins, gntR family GWK28_10960 PF01494 FAD binding domain GWK28_10965 PF09339 IclR helix-turn-helix domain GWK28_10965 PF01614 Bacterial transcriptional regulator GWK28_10970 PF02525 Flavodoxin-like fold GWK28_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_10975 PF03466 LysR substrate binding domain GWK28_10980 PF02627 Carboxymuconolactone decarboxylase family GWK28_10985 PF00171 Aldehyde dehydrogenase family GWK28_10995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GWK28_11005 PF00171 Aldehyde dehydrogenase family GWK28_11010 PF00296 Luciferase-like monooxygenase GWK28_11015 PF01613 Flavin reductase like domain GWK28_11020 PF12697 Alpha/beta hydrolase family GWK28_11040 PF01292 Prokaryotic cytochrome b561 GWK28_11045 PF00199 Catalase GWK28_11050 PF07690 Major Facilitator Superfamily GWK28_11055 PF00682 HMGL-like GWK28_11060 PF02515 CoA-transferase family III GWK28_11090 PF00313 'Cold-shock' DNA-binding domain GWK28_11140 PF03061 Thioesterase superfamily GWK28_11145 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_11150 PF07848 PaaX-like protein GWK28_11150 PF08223 PaaX-like protein C-terminal domain GWK28_11155 PF00501 AMP-binding enzyme GWK28_11155 PF14535 AMP-binding enzyme C-terminal domain GWK28_11160 PF02803 Thiolase, C-terminal domain GWK28_11160 PF00108 Thiolase, N-terminal domain GWK28_11165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GWK28_11165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GWK28_11165 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GWK28_11170 PF00378 Enoyl-CoA hydratase/isomerase GWK28_11175 PF00378 Enoyl-CoA hydratase/isomerase GWK28_11180 PF00175 Oxidoreductase NAD-binding domain GWK28_11180 PF00970 Oxidoreductase FAD-binding domain GWK28_11180 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_11185 PF01883 Iron-sulfur cluster assembly protein GWK28_11190 PF05138 Phenylacetic acid catabolic protein GWK28_11195 PF06243 Phenylacetic acid degradation B GWK28_11200 PF05138 Phenylacetic acid catabolic protein GWK28_11205 PF00171 Aldehyde dehydrogenase family GWK28_11205 PF01575 MaoC like domain GWK28_11210 PF03315 Serine dehydratase beta chain GWK28_11210 PF03313 Serine dehydratase alpha chain GWK28_11215 PF13520 Amino acid permease GWK28_11220 PF00171 Aldehyde dehydrogenase family GWK28_11225 PF00083 Sugar (and other) transporter GWK28_11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_11235 PF04324 BFD-like [2Fe-2S] binding domain GWK28_11245 PF01266 FAD dependent oxidoreductase GWK28_11250 PF05544 Proline racemase GWK28_11255 PF00392 Bacterial regulatory proteins, gntR family GWK28_11265 PF00701 Dihydrodipicolinate synthetase family GWK28_11295 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) GWK28_11295 PF04717 Type VI secretion system, phage-baseplate injector GWK28_11295 PF13296 Putative type VI secretion system Rhs element Vgr GWK28_11310 PF00005 ABC transporter GWK28_11315 PF00497 Bacterial extracellular solute-binding proteins, family 3 GWK28_11320 PF01425 Amidase GWK28_11325 PF08753 NikR C terminal nickel binding domain GWK28_11325 PF01402 Ribbon-helix-helix protein, copG family GWK28_11335 PF01638 HxlR-like helix-turn-helix GWK28_11340 PF02525 Flavodoxin-like fold GWK28_11345 PF02785 Biotin carboxylase C-terminal domain GWK28_11345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_11345 PF00289 Biotin carboxylase, N-terminal domain GWK28_11360 PF13823 Alcohol dehydrogenase GroES-associated GWK28_11360 PF00107 Zinc-binding dehydrogenase GWK28_11360 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_11370 PF00440 Bacterial regulatory proteins, tetR family GWK28_11380 PF00654 Voltage gated chloride channel GWK28_11385 PF00364 Biotin-requiring enzyme GWK28_11385 PF02785 Biotin carboxylase C-terminal domain GWK28_11385 PF00289 Biotin carboxylase, N-terminal domain GWK28_11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GWK28_11395 PF07286 Protein of unknown function (DUF1445) GWK28_11400 PF03746 LamB/YcsF family GWK28_11405 PF01566 Natural resistance-associated macrophage protein GWK28_11410 PF03466 LysR substrate binding domain GWK28_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_11445 PF03527 RHS protein GWK28_11445 PF05593 RHS Repeat GWK28_11445 PF14220 Domain of unknown function (DUF4329) GWK28_11465 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) GWK28_11465 PF04717 Type VI secretion system, phage-baseplate injector GWK28_11465 PF13296 Putative type VI secretion system Rhs element Vgr GWK28_11475 PF13419 Haloacid dehalogenase-like hydrolase GWK28_11495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GWK28_11495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GWK28_11510 PF00872 Transposase, Mutator family GWK28_11530 PF07690 Major Facilitator Superfamily GWK28_11540 PF03279 Bacterial lipid A biosynthesis acyltransferase GWK28_11545 PF03707 Bacterial signalling protein N terminal repeat GWK28_11545 PF00990 Diguanylate cyclase, GGDEF domain GWK28_11545 PF00563 EAL domain GWK28_11550 PF00892 EamA-like transporter family GWK28_11555 PF01037 Lrp/AsnC ligand binding domain GWK28_11560 PF01624 MutS domain I GWK28_11560 PF05192 MutS domain III GWK28_11560 PF05190 MutS family domain IV GWK28_11560 PF00488 MutS domain V GWK28_11560 PF05188 MutS domain II GWK28_11570 PF11953 Domain of unknown function (DUF3470) GWK28_11570 PF00037 4Fe-4S binding domain GWK28_11580 PF01596 O-methyltransferase GWK28_11590 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_11595 PF01205 Uncharacterized protein family UPF0029 GWK28_11605 PF00005 ABC transporter GWK28_11605 PF00664 ABC transporter transmembrane region GWK28_11605 PF03412 Peptidase C39 family GWK28_11610 PF02321 Outer membrane efflux protein GWK28_11615 PF00005 ABC transporter GWK28_11615 PF12399 Branched-chain amino acid ATP-binding cassette transporter GWK28_11620 PF03968 OstA-like protein GWK28_11635 PF00571 CBS domain GWK28_11635 PF01380 SIS domain GWK28_11640 PF09190 DALR domain GWK28_11640 PF01406 tRNA synthetases class I (C) catalytic domain GWK28_11670 PF01638 HxlR-like helix-turn-helix GWK28_11675 PF07690 Major Facilitator Superfamily GWK28_11700 PF03807 NADP oxidoreductase coenzyme F420-dependent GWK28_11700 PF14748 Pyrroline-5-carboxylate reductase dimerisation GWK28_11710 PF00313 'Cold-shock' DNA-binding domain GWK28_11715 PF01810 LysE type translocator GWK28_11750 PF13742 OB-fold nucleic acid binding domain GWK28_11750 PF02601 Exonuclease VII, large subunit GWK28_11785 PF09278 MerR, DNA binding GWK28_11785 PF00376 MerR family regulatory protein GWK28_11790 PF00403 Heavy-metal-associated domain GWK28_11800 PF06505 Activator of aromatic catabolism GWK28_11800 PF02954 Bacterial regulatory protein, Fis family GWK28_11800 PF02830 V4R domain GWK28_11800 PF00158 Sigma-54 interaction domain GWK28_11805 PF06099 Phenol hydroxylase subunit GWK28_11810 PF02332 Methane/Phenol/Toluene Hydroxylase GWK28_11815 PF02406 MmoB/DmpM family GWK28_11820 PF02332 Methane/Phenol/Toluene Hydroxylase GWK28_11820 PF04945 YHS domain GWK28_11830 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_11830 PF00175 Oxidoreductase NAD-binding domain GWK28_11830 PF00970 Oxidoreductase FAD-binding domain GWK28_11840 PF03466 LysR substrate binding domain GWK28_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_11850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GWK28_11850 PF00355 Rieske [2Fe-2S] domain GWK28_11855 PF00866 Ring hydroxylating beta subunit GWK28_11860 PF00175 Oxidoreductase NAD-binding domain GWK28_11860 PF00970 Oxidoreductase FAD-binding domain GWK28_11860 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_11865 PF00106 short chain dehydrogenase GWK28_11870 PF03594 Benzoate membrane transport protein GWK28_11875 PF07690 Major Facilitator Superfamily GWK28_11885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GWK28_11885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GWK28_11890 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GWK28_11890 PF00271 Helicase conserved C-terminal domain GWK28_11890 PF04408 Helicase associated domain (HA2) GWK28_11890 PF11898 Domain of unknown function (DUF3418) GWK28_11890 PF00270 DEAD/DEAH box helicase GWK28_11895 PF10417 C-terminal domain of 1-Cys peroxiredoxin GWK28_11895 PF00578 AhpC/TSA family GWK28_11915 PF13192 Thioredoxin domain GWK28_11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_11925 PF02798 Glutathione S-transferase, N-terminal domain GWK28_11925 PF00043 Glutathione S-transferase, C-terminal domain GWK28_11935 PF02390 Putative methyltransferase GWK28_11940 PF13417 Glutathione S-transferase, N-terminal domain GWK28_11940 PF00043 Glutathione S-transferase, C-terminal domain GWK28_11950 PF13488 Glycine zipper GWK28_11950 PF00691 OmpA family GWK28_11955 PF01979 Amidohydrolase family GWK28_11960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GWK28_11960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GWK28_11970 PF10672 S-adenosylmethionine-dependent methyltransferase GWK28_11970 PF01170 Putative RNA methylase family UPF0020 GWK28_11970 PF02926 THUMP domain GWK28_11985 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_11985 PF10431 C-terminal, D2-small domain, of ClpB protein GWK28_11985 PF07724 AAA domain (Cdc48 subfamily) GWK28_11985 PF17871 AAA lid domain GWK28_11985 PF02861 Clp amino terminal domain, pathogenicity island component GWK28_12000 PF02566 OsmC-like protein GWK28_12005 PF00027 Cyclic nucleotide-binding domain GWK28_12005 PF13545 Crp-like helix-turn-helix domain GWK28_12010 PF00248 Aldo/keto reductase family GWK28_12025 PF00709 Adenylosuccinate synthetase GWK28_12030 PF13393 Histidyl-tRNA synthetase GWK28_12035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GWK28_12035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GWK28_12040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GWK28_12040 PF02272 DHHA1 domain GWK28_12040 PF01411 tRNA synthetases class II (A) GWK28_12045 PF00589 Phage integrase family GWK28_12045 PF13356 Arm DNA-binding domain GWK28_12085 PF00182 Chitinase class I GWK28_12180 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) GWK28_12195 PF06381 Protein of unknown function (DUF1073) GWK28_12245 PF13840 ACT domain GWK28_12245 PF01842 ACT domain GWK28_12245 PF00696 Amino acid kinase family GWK28_12250 PF02599 Global regulator protein family GWK28_12255 PF01351 Ribonuclease HII GWK28_12265 PF01292 Prokaryotic cytochrome b561 GWK28_12270 PF00962 Adenosine/AMP deaminase GWK28_12275 PF00860 Permease family GWK28_12285 PF00743 Flavin-binding monooxygenase-like GWK28_12290 PF00106 short chain dehydrogenase GWK28_12300 PF02678 Pirin GWK28_12300 PF17954 Quercetinase C-terminal cupin domain GWK28_12305 PF00440 Bacterial regulatory proteins, tetR family GWK28_12305 PF17932 Tetracyclin repressor-like, C-terminal domain GWK28_12315 PF00106 short chain dehydrogenase GWK28_12320 PF00743 Flavin-binding monooxygenase-like GWK28_12325 PF04072 Leucine carboxyl methyltransferase GWK28_12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_12330 PF03466 LysR substrate binding domain GWK28_12335 PF07690 Major Facilitator Superfamily GWK28_12340 PF05681 Fumarate hydratase (Fumerase) GWK28_12345 PF05683 Fumarase C-terminus GWK28_12350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GWK28_12350 PF12833 Helix-turn-helix domain GWK28_12355 PF00743 Flavin-binding monooxygenase-like GWK28_12360 PF00106 short chain dehydrogenase GWK28_12365 PF07859 alpha/beta hydrolase fold GWK28_12370 PF05199 GMC oxidoreductase GWK28_12375 PF03573 outer membrane porin, OprD family GWK28_12380 PF07690 Major Facilitator Superfamily GWK28_12385 PF00884 Sulfatase GWK28_12390 PF03781 Sulfatase-modifying factor enzyme 1 GWK28_12400 PF00355 Rieske [2Fe-2S] domain GWK28_12405 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_12405 PF00175 Oxidoreductase NAD-binding domain GWK28_12420 PF07690 Major Facilitator Superfamily GWK28_12425 PF00378 Enoyl-CoA hydratase/isomerase GWK28_12430 PF00171 Aldehyde dehydrogenase family GWK28_12440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_12440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_12440 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_12445 PF03573 outer membrane porin, OprD family GWK28_12460 PF07519 Tannase and feruloyl esterase GWK28_12465 PF07729 FCD domain GWK28_12465 PF00392 Bacterial regulatory proteins, gntR family GWK28_12470 PF00171 Aldehyde dehydrogenase family GWK28_12475 PF00701 Dihydrodipicolinate synthetase family GWK28_12480 PF13378 Enolase C-terminal domain-like GWK28_12490 PF08666 SAF domain GWK28_12490 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GWK28_12495 PF00892 EamA-like transporter family GWK28_12500 PF12833 Helix-turn-helix domain GWK28_12500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GWK28_12505 PF00171 Aldehyde dehydrogenase family GWK28_12510 PF00324 Amino acid permease GWK28_12515 PF04958 Arginine N-succinyltransferase beta subunit GWK28_12520 PF00202 Aminotransferase class-III GWK28_12530 PF00171 Aldehyde dehydrogenase family GWK28_12540 PF07729 FCD domain GWK28_12540 PF00392 Bacterial regulatory proteins, gntR family GWK28_12550 PF00324 Amino acid permease GWK28_12555 PF01266 FAD dependent oxidoreductase GWK28_12560 PF00324 Amino acid permease GWK28_12570 PF05643 Putative bacterial lipoprotein (DUF799) GWK28_12580 PF03783 Curli production assembly/transport component CsgG GWK28_12595 PF00108 Thiolase, N-terminal domain GWK28_12595 PF02803 Thiolase, C-terminal domain GWK28_12600 PF01144 Coenzyme A transferase GWK28_12605 PF01144 Coenzyme A transferase GWK28_12620 PF04444 Catechol dioxygenase N terminus GWK28_12620 PF00775 Dioxygenase GWK28_12625 PF00465 Iron-containing alcohol dehydrogenase GWK28_12630 PF00171 Aldehyde dehydrogenase family GWK28_12650 PF07690 Major Facilitator Superfamily GWK28_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_12660 PF03466 LysR substrate binding domain GWK28_12670 PF03781 Sulfatase-modifying factor enzyme 1 GWK28_12675 PF00884 Sulfatase GWK28_12690 PF03180 NLPA lipoprotein GWK28_12700 PF13676 TIR domain GWK28_12705 PF09828 Chromate resistance exported protein GWK28_12710 PF02417 Chromate transporter GWK28_12720 PF14864 Alkyl sulfatase C-terminal GWK28_12720 PF14863 Alkyl sulfatase dimerisation GWK28_12720 PF00753 Metallo-beta-lactamase superfamily GWK28_12730 PF16916 Dimerisation domain of Zinc Transporter GWK28_12730 PF01545 Cation efflux family GWK28_12745 PF07690 Major Facilitator Superfamily GWK28_12765 PF00873 AcrB/AcrD/AcrF family GWK28_12770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_12770 PF00529 HlyD membrane-fusion protein of T1SS GWK28_12810 PF00872 Transposase, Mutator family GWK28_12860 PF13356 Arm DNA-binding domain GWK28_12860 PF00589 Phage integrase family GWK28_12870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_12870 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_12880 PF00764 Arginosuccinate synthase GWK28_12890 PF01979 Amidohydrolase family GWK28_12895 PF00929 Exonuclease GWK28_12905 PF07715 TonB-dependent Receptor Plug Domain GWK28_12905 PF00593 TonB dependent receptor GWK28_12910 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_12910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GWK28_12915 PF00005 ABC transporter GWK28_12915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GWK28_12920 PF12911 N-terminal TM domain of oligopeptide transport permease C GWK28_12920 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_12925 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_12930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GWK28_12935 PF01464 Transglycosylase SLT domain GWK28_12935 PF01476 LysM domain GWK28_12935 PF01464 Transglycosylase SLT domain GWK28_12935 PF01476 LysM domain GWK28_12940 PF00929 Exonuclease GWK28_12950 PF00293 NUDIX domain GWK28_12950 PF09297 NADH pyrophosphatase zinc ribbon domain GWK28_12960 PF04972 BON domain GWK28_12965 PF02021 Uncharacterised protein family UPF0102 GWK28_12970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GWK28_12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_12980 PF03466 LysR substrate binding domain GWK28_12985 PF01810 LysE type translocator GWK28_12995 PF13411 MerR HTH family regulatory protein GWK28_13005 PF01494 FAD binding domain GWK28_13010 PF01494 FAD binding domain GWK28_13015 PF00557 Metallopeptidase family M24 GWK28_13015 PF05195 Aminopeptidase P, N-terminal domain GWK28_13055 PF01812 5-formyltetrahydrofolate cyclo-ligase family GWK28_13065 PF00004 ATPase family associated with various cellular activities (AAA) GWK28_13065 PF05362 Lon protease (S16) C-terminal proteolytic domain GWK28_13065 PF02190 ATP-dependent protease La (LON) substrate-binding domain GWK28_13070 PF02590 Predicted SPOUT methyltransferase GWK28_13075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GWK28_13085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GWK28_13085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GWK28_13090 PF04060 Putative Fe-S cluster GWK28_13095 PF00633 Helix-hairpin-helix motif GWK28_13095 PF10576 Iron-sulfur binding domain of endonuclease III GWK28_13095 PF00730 HhH-GPD superfamily base excision DNA repair protein GWK28_13105 PF05191 Adenylate kinase, active site lid GWK28_13120 PF03717 Penicillin-binding Protein dimerisation domain GWK28_13120 PF00905 Penicillin binding protein transpeptidase domain GWK28_13135 PF02492 CobW/HypB/UreG, nucleotide-binding domain GWK28_13140 PF01730 UreF GWK28_13145 PF02814 UreE urease accessory protein, N-terminal domain GWK28_13145 PF05194 UreE urease accessory protein, C-terminal domain GWK28_13150 PF00449 Urease alpha-subunit, N-terminal domain GWK28_13150 PF01979 Amidohydrolase family GWK28_13155 PF00699 Urease beta subunit GWK28_13160 PF00547 Urease, gamma subunit GWK28_13165 PF01774 UreD urease accessory protein GWK28_13180 PF00463 Isocitrate lyase family GWK28_13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_13185 PF03466 LysR substrate binding domain GWK28_13190 PF01595 Cyclin M transmembrane N-terminal domain GWK28_13190 PF00571 CBS domain GWK28_13190 PF03471 Transporter associated domain GWK28_13195 PF03600 Citrate transporter GWK28_13210 PF00009 Elongation factor Tu GTP binding domain GWK28_13215 PF01507 Phosphoadenosine phosphosulfate reductase family GWK28_13225 PF14052 Capsule assembly protein Wzi GWK28_13230 PF00152 tRNA synthetases class II (D, K and N) GWK28_13230 PF01336 OB-fold nucleic acid binding domain GWK28_13245 PF00301 Rubredoxin GWK28_13250 PF18113 Rubredoxin binding C-terminal domain GWK28_13250 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_13255 PF00561 alpha/beta hydrolase fold GWK28_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_13260 PF03466 LysR substrate binding domain GWK28_13275 PF17941 Polyphosphate kinase C-terminal domain 1 GWK28_13275 PF13089 Polyphosphate kinase N-terminal domain GWK28_13275 PF02503 Polyphosphate kinase middle domain GWK28_13275 PF13090 Polyphosphate kinase C-terminal domain 2 GWK28_13280 PF00912 Transglycosylase GWK28_13285 PF01694 Rhomboid family GWK28_13295 PF00005 ABC transporter GWK28_13300 PF13472 GDSL-like Lipase/Acylhydrolase family GWK28_13305 PF00484 Carbonic anhydrase GWK28_13310 PF00561 alpha/beta hydrolase fold GWK28_13320 PF07715 TonB-dependent Receptor Plug Domain GWK28_13320 PF00593 TonB dependent receptor GWK28_13325 PF01521 Iron-sulphur cluster biosynthesis GWK28_13325 PF01106 NifU-like domain GWK28_13335 PF00884 Sulfatase GWK28_13340 PF03781 Sulfatase-modifying factor enzyme 1 GWK28_13355 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_13360 PF01384 Phosphate transporter family GWK28_13365 PF00809 Pterin binding enzyme GWK28_13365 PF02965 Vitamin B12 dependent methionine synthase, activation domain GWK28_13365 PF02607 B12 binding domain GWK28_13365 PF02310 B12 binding domain GWK28_13365 PF02574 Homocysteine S-methyltransferase GWK28_13370 PF02780 Transketolase, C-terminal domain GWK28_13370 PF02779 Transketolase, pyrimidine binding domain GWK28_13375 PF00456 Transketolase, thiamine diphosphate binding domain GWK28_13380 PF07690 Major Facilitator Superfamily GWK28_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_13390 PF03466 LysR substrate binding domain GWK28_13400 PF01263 Aldose 1-epimerase GWK28_13405 PF07690 Major Facilitator Superfamily GWK28_13410 PF02311 AraC-like ligand binding domain GWK28_13410 PF12833 Helix-turn-helix domain GWK28_13415 PF04960 Glutaminase GWK28_13420 PF01327 Polypeptide deformylase GWK28_13425 PF07690 Major Facilitator Superfamily GWK28_13435 PF00205 Thiamine pyrophosphate enzyme, central domain GWK28_13435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GWK28_13435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GWK28_13440 PF00171 Aldehyde dehydrogenase family GWK28_13445 PF03447 Homoserine dehydrogenase, NAD binding domain GWK28_13445 PF01958 Domain of unknown function DUF108 GWK28_13455 PF12697 Alpha/beta hydrolase family GWK28_13465 PF07690 Major Facilitator Superfamily GWK28_13470 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_13470 PF14759 Reductase C-terminal GWK28_13475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GWK28_13485 PF00355 Rieske [2Fe-2S] domain GWK28_13495 PF00355 Rieske [2Fe-2S] domain GWK28_13500 PF01614 Bacterial transcriptional regulator GWK28_13500 PF09339 IclR helix-turn-helix domain GWK28_13515 PF00378 Enoyl-CoA hydratase/isomerase GWK28_13525 PF00535 Glycosyl transferase family 2 GWK28_13530 PF01522 Polysaccharide deacetylase GWK28_13530 PF14883 Hypothetical glycosyl hydrolase family 13 GWK28_13535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_13540 PF07152 YaeQ protein GWK28_13545 PF00375 Sodium:dicarboxylate symporter family GWK28_13550 PF02492 CobW/HypB/UreG, nucleotide-binding domain GWK28_13550 PF07683 Cobalamin synthesis protein cobW C-terminal domain GWK28_13560 PF03061 Thioesterase superfamily GWK28_13570 PF02028 BCCT, betaine/carnitine/choline family transporter GWK28_13575 PF02028 BCCT, betaine/carnitine/choline family transporter GWK28_13580 PF13977 BetI-type transcriptional repressor, C-terminal GWK28_13580 PF00440 Bacterial regulatory proteins, tetR family GWK28_13585 PF00171 Aldehyde dehydrogenase family GWK28_13590 PF00732 GMC oxidoreductase GWK28_13590 PF05199 GMC oxidoreductase GWK28_13595 PF06039 Malate:quinone oxidoreductase (Mqo) GWK28_13605 PF02574 Homocysteine S-methyltransferase GWK28_13610 PF13520 Amino acid permease GWK28_13635 PF01126 Heme oxygenase GWK28_13645 PF04575 Protein of unknown function (DUF560) GWK28_13655 PF00593 TonB dependent receptor GWK28_13655 PF07715 TonB-dependent Receptor Plug Domain GWK28_13665 PF08281 Sigma-70, region 4 GWK28_13665 PF04542 Sigma-70 region 2 GWK28_13675 PF00701 Dihydrodipicolinate synthetase family GWK28_13680 PF00083 Sugar (and other) transporter GWK28_13765 PF18019 HD domain GWK28_13780 PF09615 CRISPR-associated protein (Cas_Csy3) GWK28_13790 PF01867 CRISPR associated protein Cas1 GWK28_13795 PF00436 Single-strand binding protein family GWK28_13825 PF02498 BRO family, N-terminal domain GWK28_13825 PF10548 P22AR C-terminal domain GWK28_13845 PF00589 Phage integrase family GWK28_13845 PF13356 Arm DNA-binding domain GWK28_13860 PF07690 Major Facilitator Superfamily GWK28_13865 PF13533 Biotin-lipoyl like GWK28_13870 PF03061 Thioesterase superfamily GWK28_13875 PF00490 Delta-aminolevulinic acid dehydratase GWK28_13880 PF01266 FAD dependent oxidoreductase GWK28_13885 PF01370 NAD dependent epimerase/dehydratase family GWK28_13885 PF08338 Domain of unknown function (DUF1731) GWK28_13905 PF12320 Type 5 capsule protein repressor C-terminal domain GWK28_13905 PF00149 Calcineurin-like phosphoesterase GWK28_13915 PF01168 Alanine racemase, N-terminal domain GWK28_13920 PF00437 Type II/IV secretion system protein GWK28_13925 PF00437 Type II/IV secretion system protein GWK28_13930 PF01475 Ferric uptake regulator family GWK28_13935 PF04355 SmpA / OmlA family GWK28_13940 PF03658 RnfH family Ubiquitin GWK28_13950 PF01814 Hemerythrin HHE cation binding domain GWK28_13955 PF13230 Glutamine amidotransferases class-II GWK28_13965 PF00696 Amino acid kinase family GWK28_13970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GWK28_13970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GWK28_13970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GWK28_13970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GWK28_13975 PF00692 dUTPase GWK28_13980 PF00580 UvrD/REP helicase N-terminal domain GWK28_13980 PF13361 UvrD-like helicase C-terminal domain GWK28_13985 PF00691 OmpA family GWK28_13985 PF13488 Glycine zipper GWK28_13990 PF01553 Acyltransferase GWK28_14000 PF03775 Septum formation inhibitor MinC, C-terminal domain GWK28_14005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GWK28_14010 PF03776 Septum formation topological specificity factor MinE GWK28_14025 PF01810 LysE type translocator GWK28_14030 PF01580 FtsK/SpoIIIE family GWK28_14030 PF09397 Ftsk gamma domain GWK28_14030 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GWK28_14030 PF17854 FtsK alpha domain GWK28_14035 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_14040 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GWK28_14045 PF04376 Arginine-tRNA-protein transferase, N terminus GWK28_14045 PF04377 Arginine-tRNA-protein transferase, C terminus GWK28_14050 PF00583 Acetyltransferase (GNAT) family GWK28_14065 PF03143 Elongation factor Tu C-terminal domain GWK28_14065 PF03144 Elongation factor Tu domain 2 GWK28_14065 PF00009 Elongation factor Tu GTP binding domain GWK28_14070 PF00679 Elongation factor G C-terminus GWK28_14070 PF00009 Elongation factor Tu GTP binding domain GWK28_14070 PF03144 Elongation factor Tu domain 2 GWK28_14070 PF03764 Elongation factor G, domain IV GWK28_14070 PF14492 Elongation Factor G, domain II GWK28_14075 PF00177 Ribosomal protein S7p/S5e GWK28_14080 PF00164 Ribosomal protein S12/S23 GWK28_14090 PF02801 Beta-ketoacyl synthase, C-terminal domain GWK28_14090 PF00109 Beta-ketoacyl synthase, N-terminal domain GWK28_14095 PF03653 Uncharacterised protein family (UPF0093) GWK28_14100 PF05726 Pirin C-terminal cupin domain GWK28_14100 PF02678 Pirin GWK28_14110 PF02540 NAD synthase GWK28_14110 PF00795 Carbon-nitrogen hydrolase GWK28_14125 PF00111 2Fe-2S iron-sulfur cluster binding domain GWK28_14125 PF00970 Oxidoreductase FAD-binding domain GWK28_14125 PF00175 Oxidoreductase NAD-binding domain GWK28_14130 PF00171 Aldehyde dehydrogenase family GWK28_14135 PF00355 Rieske [2Fe-2S] domain GWK28_14135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GWK28_14140 PF07859 alpha/beta hydrolase fold GWK28_14145 PF02028 BCCT, betaine/carnitine/choline family transporter GWK28_14150 PF00180 Isocitrate/isopropylmalate dehydrogenase GWK28_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14155 PF03466 LysR substrate binding domain GWK28_14175 PF00037 4Fe-4S binding domain GWK28_14180 PF01467 Cytidylyltransferase-like GWK28_14185 PF01668 SmpB protein GWK28_14190 PF03358 NADPH-dependent FMN reductase GWK28_14195 PF02578 Multi-copper polyphenol oxidoreductase laccase GWK28_14200 PF00849 RNA pseudouridylate synthase GWK28_14200 PF01479 S4 domain GWK28_14205 PF13525 Outer membrane lipoprotein GWK28_14210 PF10410 DnaB-helicase binding domain of primase GWK28_14210 PF01807 CHC2 zinc finger GWK28_14210 PF08275 DNA primase catalytic core, N-terminal domain GWK28_14210 PF08278 DNA primase DnaG DnaB-binding GWK28_14215 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GWK28_14215 PF01488 Shikimate / quinate 5-dehydrogenase GWK28_14215 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GWK28_14225 PF03550 Outer membrane lipoprotein LolB GWK28_14230 PF08544 GHMP kinases C terminal GWK28_14230 PF00288 GHMP kinases N terminal domain GWK28_14255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GWK28_14255 PF14572 Phosphoribosyl synthetase-associated domain GWK28_14260 PF01386 Ribosomal L25p family GWK28_14265 PF01195 Peptidyl-tRNA hydrolase GWK28_14270 PF02261 Aspartate decarboxylase GWK28_14285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GWK28_14295 PF03070 TENA/THI-4/PQQC family GWK28_14295 PF02581 Thiamine monophosphate synthase GWK28_14295 PF08543 Phosphomethylpyrimidine kinase GWK28_14300 PF01476 LysM domain GWK28_14300 PF04972 BON domain GWK28_14305 PF00550 Phosphopantetheine attachment site GWK28_14315 PF00698 Acyl transferase domain GWK28_14320 PF01783 Ribosomal L32p protein family GWK28_14325 PF02620 Large ribosomal RNA subunit accumulation protein YceD GWK28_14330 PF04315 Elongation factor P hydroxylase GWK28_14335 PF01300 Telomere recombination GWK28_14340 PF02616 Segregation and condensation protein ScpA GWK28_14345 PF04079 Segregation and condensation complex subunit ScpB GWK28_14350 PF00849 RNA pseudouridylate synthase GWK28_14350 PF01479 S4 domain GWK28_14365 PF00155 Aminotransferase class I and II GWK28_14370 PF06968 Biotin and Thiamin Synthesis associated domain GWK28_14370 PF04055 Radical SAM superfamily GWK28_14370 PF00202 Aminotransferase class-III GWK28_14375 PF08241 Methyltransferase domain GWK28_14375 PF12697 Alpha/beta hydrolase family GWK28_14380 PF02358 Trehalose-phosphatase GWK28_14385 PF00982 Glycosyltransferase family 20 GWK28_14390 PF07690 Major Facilitator Superfamily GWK28_14395 PF00210 Ferritin-like domain GWK28_14400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GWK28_14400 PF12826 Helix-hairpin-helix motif GWK28_14400 PF03120 NAD-dependent DNA ligase OB-fold domain GWK28_14400 PF01653 NAD-dependent DNA ligase adenylation domain GWK28_14400 PF00533 BRCA1 C Terminus (BRCT) domain GWK28_14410 PF02463 RecF/RecN/SMC N terminal domain GWK28_14410 PF06470 SMC proteins Flexible Hinge Domain GWK28_14420 PF01925 Sulfite exporter TauE/SafE GWK28_14430 PF03309 Type III pantothenate kinase GWK28_14435 PF02978 Signal peptide binding domain GWK28_14435 PF00448 SRP54-type protein, GTPase domain GWK28_14435 PF02881 SRP54-type protein, helical bundle domain GWK28_14445 PF01207 Dihydrouridine synthase (Dus) GWK28_14475 PF00692 dUTPase GWK28_14490 PF01048 Phosphorylase superfamily GWK28_14495 PF10609 NUBPL iron-transfer P-loop NTPase GWK28_14505 PF01588 Putative tRNA binding domain GWK28_14505 PF09334 tRNA synthetases class I (M) GWK28_14530 PF13533 Biotin-lipoyl like GWK28_14535 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_14550 PF05552 Conserved TM helix GWK28_14565 PF00970 Oxidoreductase FAD-binding domain GWK28_14565 PF00175 Oxidoreductase NAD-binding domain GWK28_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14570 PF03466 LysR substrate binding domain GWK28_14575 PF00313 'Cold-shock' DNA-binding domain GWK28_14585 PF00361 Proton-conducting membrane transporter GWK28_14590 PF00361 Proton-conducting membrane transporter GWK28_14595 PF00361 Proton-conducting membrane transporter GWK28_14595 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GWK28_14600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GWK28_14605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GWK28_14610 PF12838 4Fe-4S dicluster domain GWK28_14615 PF00146 NADH dehydrogenase GWK28_14620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GWK28_14620 PF00384 Molybdopterin oxidoreductase GWK28_14620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GWK28_14625 PF10531 SLBB domain GWK28_14625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GWK28_14625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GWK28_14635 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GWK28_14635 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GWK28_14640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GWK28_14645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GWK28_14650 PF17151 Periplasmic sensor domain GWK28_14650 PF00990 Diguanylate cyclase, GGDEF domain GWK28_14660 PF00672 HAMP domain GWK28_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_14660 PF00512 His Kinase A (phospho-acceptor) domain GWK28_14665 PF00486 Transcriptional regulatory protein, C terminal GWK28_14665 PF00072 Response regulator receiver domain GWK28_14675 PF02867 Ribonucleotide reductase, barrel domain GWK28_14675 PF03477 ATP cone domain GWK28_14675 PF00317 Ribonucleotide reductase, all-alpha domain GWK28_14685 PF00268 Ribonucleotide reductase, small chain GWK28_14695 PF02567 Phenazine biosynthesis-like protein GWK28_14705 PF17074 Darcynin, domain of unknown function GWK28_14720 PF01613 Flavin reductase like domain GWK28_14725 PF01717 Cobalamin-independent synthase, Catalytic domain GWK28_14725 PF08267 Cobalamin-independent synthase, N-terminal domain GWK28_14735 PF03466 LysR substrate binding domain GWK28_14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14740 PF01810 LysE type translocator GWK28_14755 PF12833 Helix-turn-helix domain GWK28_14755 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GWK28_14760 PF07687 Peptidase dimerisation domain GWK28_14760 PF01546 Peptidase family M20/M25/M40 GWK28_14770 PF03466 LysR substrate binding domain GWK28_14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14785 PF03466 LysR substrate binding domain GWK28_14790 PF00890 FAD binding domain GWK28_14790 PF14537 Cytochrome c3 GWK28_14800 PF02515 CoA-transferase family III GWK28_14805 PF07690 Major Facilitator Superfamily GWK28_14810 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_14810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_14810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_14815 PF03466 LysR substrate binding domain GWK28_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_14820 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_14820 PF00107 Zinc-binding dehydrogenase GWK28_14825 PF00962 Adenosine/AMP deaminase GWK28_14850 PF02445 Quinolinate synthetase A protein GWK28_14855 PF01960 ArgJ family GWK28_14860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GWK28_14860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GWK28_14865 PF00893 Small Multidrug Resistance protein GWK28_14880 PF07732 Multicopper oxidase GWK28_14880 PF00394 Multicopper oxidase GWK28_14880 PF07731 Multicopper oxidase GWK28_14895 PF00834 Ribulose-phosphate 3 epimerase family GWK28_14905 PF00756 Putative esterase GWK28_14915 PF04445 Putative SAM-dependent methyltransferase GWK28_14920 PF00814 Glycoprotease family GWK28_14925 PF00132 Bacterial transferase hexapeptide (six repeats) GWK28_14930 PF00293 NUDIX domain GWK28_14965 PF00005 ABC transporter GWK28_14965 PF01476 LysM domain GWK28_14970 PF00425 chorismate binding enzyme GWK28_14970 PF04715 Anthranilate synthase component I, N terminal region GWK28_14975 PF00155 Aminotransferase class I and II GWK28_14980 PF00815 Histidinol dehydrogenase GWK28_14985 PF01634 ATP phosphoribosyltransferase GWK28_14990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GWK28_14995 PF01722 BolA-like protein GWK28_15000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GWK28_15005 PF04963 Sigma-54 factor, core binding domain GWK28_15005 PF04552 Sigma-54, DNA binding domain GWK28_15005 PF00309 Sigma-54 factor, Activator interacting domain (AID) GWK28_15050 PF00795 Carbon-nitrogen hydrolase GWK28_15060 PF01047 MarR family GWK28_15065 PF02566 OsmC-like protein GWK28_15070 PF00437 Type II/IV secretion system protein GWK28_15090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GWK28_15090 PF01367 5'-3' exonuclease, C-terminal SAM fold GWK28_15090 PF00476 DNA polymerase family A GWK28_15090 PF01612 3'-5' exonuclease GWK28_15095 PF02325 YGGT family GWK28_15100 PF03807 NADP oxidoreductase coenzyme F420-dependent GWK28_15100 PF14748 Pyrroline-5-carboxylate reductase dimerisation GWK28_15105 PF09179 TilS substrate binding domain GWK28_15105 PF01171 PP-loop family GWK28_15105 PF11734 TilS substrate C-terminal domain GWK28_15110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GWK28_15115 PF02541 Ppx/GppA phosphatase family GWK28_15120 PF00085 Thioredoxin GWK28_15125 PF07498 Rho termination factor, N-terminal domain GWK28_15125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GWK28_15125 PF07497 Rho termination factor, RNA-binding domain GWK28_15140 PF00216 Bacterial DNA-binding protein GWK28_15145 PF01588 Putative tRNA binding domain GWK28_15145 PF03147 Ferredoxin-fold anticodon binding domain GWK28_15145 PF03483 B3/4 domain GWK28_15145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GWK28_15145 PF03484 tRNA synthetase B5 domain GWK28_15150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GWK28_15150 PF01409 tRNA synthetases class II core domain (F) GWK28_15170 PF00453 Ribosomal protein L20 GWK28_15175 PF01632 Ribosomal protein L35 GWK28_15195 PF09335 SNARE associated Golgi protein GWK28_15200 PF02798 Glutathione S-transferase, N-terminal domain GWK28_15200 PF00043 Glutathione S-transferase, C-terminal domain GWK28_15205 PF05198 Translation initiation factor IF-3, N-terminal domain GWK28_15205 PF00707 Translation initiation factor IF-3, C-terminal domain GWK28_15210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GWK28_15210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GWK28_15210 PF03129 Anticodon binding domain GWK28_15210 PF02824 TGS domain GWK28_15215 PF13193 AMP-binding enzyme C-terminal domain GWK28_15215 PF00501 AMP-binding enzyme GWK28_15220 PF04751 Protein of unknown function (DUF615) GWK28_15225 PF00381 PTS HPr component phosphorylation site GWK28_15230 PF03668 P-loop ATPase protein family GWK28_15235 PF02569 Pantoate-beta-alanine ligase GWK28_15240 PF02548 Ketopantoate hydroxymethyltransferase GWK28_15245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GWK28_15250 PF01743 Poly A polymerase head domain GWK28_15250 PF12626 Polymerase A arginine-rich C-terminus GWK28_15250 PF12627 Probable RNA and SrmB- binding site of polymerase A GWK28_15260 PF03819 MazG nucleotide pyrophosphohydrolase domain GWK28_15270 PF13291 ACT domain GWK28_15270 PF02824 TGS domain GWK28_15270 PF04607 Region found in RelA / SpoT proteins GWK28_15275 PF05958 tRNA (Uracil-5-)-methyltransferase GWK28_15285 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_15290 PF00672 HAMP domain GWK28_15290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GWK28_15290 PF00072 Response regulator receiver domain GWK28_15290 PF01627 Hpt domain GWK28_15290 PF00512 His Kinase A (phospho-acceptor) domain GWK28_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_15295 PF00378 Enoyl-CoA hydratase/isomerase GWK28_15300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GWK28_15300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GWK28_15305 PF01261 Xylose isomerase-like TIM barrel GWK28_15315 PF00106 short chain dehydrogenase GWK28_15320 PF02233 NAD(P) transhydrogenase beta subunit GWK28_15325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GWK28_15330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GWK28_15330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GWK28_15335 PF00892 EamA-like transporter family GWK28_15345 PF07690 Major Facilitator Superfamily GWK28_15355 PF00872 Transposase, Mutator family GWK28_15365 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_15370 PF03358 NADPH-dependent FMN reductase GWK28_15375 PF01758 Sodium Bile acid symporter family GWK28_15385 PF01022 Bacterial regulatory protein, arsR family GWK28_15390 PF03960 ArsC family GWK28_15395 PF13411 MerR HTH family regulatory protein GWK28_15410 PF07664 Ferrous iron transport protein B C terminus GWK28_15410 PF07670 Nucleoside recognition GWK28_15410 PF02421 Ferrous iron transport protein B GWK28_15420 PF00872 Transposase, Mutator family GWK28_15435 PF07731 Multicopper oxidase GWK28_15435 PF00394 Multicopper oxidase GWK28_15435 PF07732 Multicopper oxidase GWK28_15445 PF00072 Response regulator receiver domain GWK28_15445 PF00486 Transcriptional regulatory protein, C terminal GWK28_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_15450 PF00672 HAMP domain GWK28_15450 PF00512 His Kinase A (phospho-acceptor) domain GWK28_15455 PF04945 YHS domain GWK28_15480 PF00589 Phage integrase family GWK28_15485 PF01207 Dihydrouridine synthase (Dus) GWK28_15495 PF03466 LysR substrate binding domain GWK28_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_15505 PF00899 ThiF family GWK28_15515 PF00330 Aconitase family (aconitate hydratase) GWK28_15515 PF00694 Aconitase C-terminal domain GWK28_15520 PF01026 TatD related DNase GWK28_15535 PF16658 Class II release factor RF3, C-terminal domain GWK28_15535 PF00009 Elongation factor Tu GTP binding domain GWK28_15535 PF03144 Elongation factor Tu domain 2 GWK28_15550 PF04151 Bacterial pre-peptidase C-terminal domain GWK28_15560 PF00107 Zinc-binding dehydrogenase GWK28_15560 PF16884 N-terminal domain of oxidoreductase GWK28_15565 PF00440 Bacterial regulatory proteins, tetR family GWK28_15565 PF16925 Tetracyclin repressor-like, C-terminal domain GWK28_15585 PF00465 Iron-containing alcohol dehydrogenase GWK28_15595 PF00756 Putative esterase GWK28_15600 PF00107 Zinc-binding dehydrogenase GWK28_15600 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_15605 PF02583 Metal-sensitive transcriptional repressor GWK28_15610 PF14765 Polyketide synthase dehydratase GWK28_15610 PF00550 Phosphopantetheine attachment site GWK28_15610 PF08659 KR domain GWK28_15610 PF00109 Beta-ketoacyl synthase, N-terminal domain GWK28_15610 PF16197 Ketoacyl-synthetase C-terminal extension GWK28_15610 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_15610 PF00698 Acyl transferase domain GWK28_15610 PF02801 Beta-ketoacyl synthase, C-terminal domain GWK28_15615 PF00107 Zinc-binding dehydrogenase GWK28_15615 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_15620 PF03466 LysR substrate binding domain GWK28_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_15625 PF00106 short chain dehydrogenase GWK28_15630 PF00107 Zinc-binding dehydrogenase GWK28_15630 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_15645 PF02661 Fic/DOC family GWK28_15645 PF13784 Fic/DOC family N-terminal GWK28_15670 PF12161 HsdM N-terminal domain GWK28_15670 PF02384 N-6 DNA Methylase GWK28_15770 PF03707 Bacterial signalling protein N terminal repeat GWK28_15770 PF00990 Diguanylate cyclase, GGDEF domain GWK28_15770 PF00563 EAL domain GWK28_15775 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GWK28_15775 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GWK28_15780 PF10369 Small subunit of acetolactate synthase GWK28_15785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GWK28_15785 PF00205 Thiamine pyrophosphate enzyme, central domain GWK28_15785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GWK28_15795 PF09334 tRNA synthetases class I (M) GWK28_15795 PF13603 Leucyl-tRNA synthetase, Domain 2 GWK28_15795 PF00133 tRNA synthetases class I (I, L, M and V) GWK28_15795 PF08264 Anticodon-binding domain of tRNA GWK28_15810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_15815 PF12704 MacB-like periplasmic core domain GWK28_15815 PF02687 FtsX-like permease family GWK28_15815 PF00005 ABC transporter GWK28_15820 PF02321 Outer membrane efflux protein GWK28_15835 PF00929 Exonuclease GWK28_15840 PF03193 RsgA GTPase GWK28_15850 PF00462 Glutaredoxin GWK28_15855 PF02556 Preprotein translocase subunit SecB GWK28_15865 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GWK28_15865 PF01926 50S ribosome-binding GTPase GWK28_15870 PF13360 PQQ-like domain GWK28_15880 PF13393 Histidyl-tRNA synthetase GWK28_15880 PF03129 Anticodon binding domain GWK28_15885 PF04551 GcpE protein GWK28_15890 PF13464 Domain of unknown function (DUF4115) GWK28_15900 PF04055 Radical SAM superfamily GWK28_15905 PF00334 Nucleoside diphosphate kinase GWK28_15910 PF04384 Iron-sulphur cluster assembly GWK28_15915 PF01569 PAP2 superfamily GWK28_15920 PF13439 Glycosyltransferase Family 4 GWK28_15920 PF00534 Glycosyl transferases group 1 GWK28_15925 PF17804 Tail specific protease N-terminal domain GWK28_15925 PF03572 Peptidase family S41 GWK28_15925 PF00595 PDZ domain GWK28_15925 PF11818 C-terminal domain of tail specific protease (DUF3340) GWK28_15930 PF00933 Glycosyl hydrolase family 3 N terminal domain GWK28_15940 PF00561 alpha/beta hydrolase fold GWK28_15945 PF00171 Aldehyde dehydrogenase family GWK28_15950 PF00171 Aldehyde dehydrogenase family GWK28_15955 PF01202 Shikimate kinase GWK28_15960 PF02447 GntP family permease GWK28_15965 PF01081 KDPG and KHG aldolase GWK28_15970 PF00920 Dehydratase family GWK28_15975 PF00871 Acetokinase family GWK28_15980 PF07085 DRTGG domain GWK28_15980 PF01515 Phosphate acetyl/butaryl transferase GWK28_15985 PF05681 Fumarate hydratase (Fumerase) GWK28_15985 PF05683 Fumarase C-terminus GWK28_16000 PF06689 ClpX C4-type zinc finger GWK28_16000 PF10431 C-terminal, D2-small domain, of ClpB protein GWK28_16000 PF07724 AAA domain (Cdc48 subfamily) GWK28_16005 PF00574 Clp protease GWK28_16010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_16010 PF05698 Bacterial trigger factor protein (TF) C-terminus GWK28_16010 PF05697 Bacterial trigger factor protein (TF) GWK28_16015 PF07715 TonB-dependent Receptor Plug Domain GWK28_16015 PF00593 TonB dependent receptor GWK28_16020 PF18331 PKHD-type hydroxylase C-terminal domain GWK28_16020 PF13640 2OG-Fe(II) oxygenase superfamily GWK28_16025 PF08502 LeuA allosteric (dimerisation) domain GWK28_16025 PF00682 HMGL-like GWK28_16030 PF00561 alpha/beta hydrolase fold GWK28_16035 PF07021 Methionine biosynthesis protein MetW GWK28_16035 PF00561 alpha/beta hydrolase fold GWK28_16050 PF01725 Ham1 family GWK28_16060 PF02416 mttA/Hcf106 family GWK28_16065 PF02416 mttA/Hcf106 family GWK28_16070 PF00902 Sec-independent protein translocase protein (TatC) GWK28_16135 PF01790 Prolipoprotein diacylglyceryl transferase GWK28_16150 PF00303 Thymidylate synthase GWK28_16155 PF00186 Dihydrofolate reductase GWK28_16165 PF01625 Peptide methionine sulfoxide reductase GWK28_16175 PF01618 MotA/TolQ/ExbB proton channel family GWK28_16185 PF01842 ACT domain GWK28_16185 PF00551 Formyl transferase GWK28_16195 PF00171 Aldehyde dehydrogenase family GWK28_16200 PF00830 Ribosomal L28 family GWK28_16205 PF00471 Ribosomal protein L33 GWK28_16210 PF02254 TrkA-N domain GWK28_16210 PF00999 Sodium/hydrogen exchanger family GWK28_16230 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GWK28_16235 PF13361 UvrD-like helicase C-terminal domain GWK28_16235 PF00580 UvrD/REP helicase N-terminal domain GWK28_16250 PF01131 DNA topoisomerase GWK28_16250 PF08272 Topoisomerase I zinc-ribbon-like GWK28_16250 PF01396 Topoisomerase DNA binding C4 zinc finger GWK28_16250 PF01751 Toprim domain GWK28_16260 PF01638 HxlR-like helix-turn-helix GWK28_16265 PF00107 Zinc-binding dehydrogenase GWK28_16265 PF08240 Alcohol dehydrogenase GroES-like domain GWK28_16270 PF04102 SlyX GWK28_16275 PF12848 ABC transporter GWK28_16275 PF16326 ABC transporter C-terminal domain GWK28_16275 PF00005 ABC transporter GWK28_16290 PF03279 Bacterial lipid A biosynthesis acyltransferase GWK28_16300 PF00375 Sodium:dicarboxylate symporter family GWK28_16310 PF01118 Semialdehyde dehydrogenase, NAD binding domain GWK28_16310 PF02774 Semialdehyde dehydrogenase, dimerisation domain GWK28_16330 PF01416 tRNA pseudouridine synthase GWK28_16340 PF01176 Translation initiation factor 1A / IF-1 GWK28_16355 PF00180 Isocitrate/isopropylmalate dehydrogenase GWK28_16365 PF00694 Aconitase C-terminal domain GWK28_16370 PF00330 Aconitase family (aconitate hydratase) GWK28_16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_16380 PF03466 LysR substrate binding domain GWK28_16390 PF00293 NUDIX domain GWK28_16395 PF01590 GAF domain GWK28_16395 PF05524 PEP-utilising enzyme, N-terminal GWK28_16395 PF00391 PEP-utilising enzyme, mobile domain GWK28_16395 PF02896 PEP-utilising enzyme, TIM barrel domain GWK28_16400 PF00141 Peroxidase GWK28_16405 PF12706 Beta-lactamase superfamily domain GWK28_16410 PF03466 LysR substrate binding domain GWK28_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_16420 PF02798 Glutathione S-transferase, N-terminal domain GWK28_16425 PF08279 HTH domain GWK28_16425 PF13280 WYL domain GWK28_16430 PF13419 Haloacid dehalogenase-like hydrolase GWK28_16435 PF01479 S4 domain GWK28_16435 PF00849 RNA pseudouridylate synthase GWK28_16440 PF00575 S1 RNA binding domain GWK28_16440 PF10150 Ribonuclease E/G family GWK28_16440 PF12111 Polyribonucleotide phosphorylase C terminal GWK28_16445 PF13193 AMP-binding enzyme C-terminal domain GWK28_16445 PF00501 AMP-binding enzyme GWK28_16460 PF03466 LysR substrate binding domain GWK28_16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GWK28_16465 PF00106 short chain dehydrogenase GWK28_16470 PF04055 Radical SAM superfamily GWK28_16470 PF06969 HemN C-terminal domain GWK28_16480 PF01554 MatE GWK28_16485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_16485 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_16485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GWK28_16490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_16490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GWK28_16495 PF03109 ABC1 family GWK28_16500 PF01197 Ribosomal protein L31 GWK28_16565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GWK28_16585 PF03884 DNA gyrase inhibitor YacG GWK28_16590 PF00753 Metallo-beta-lactamase superfamily GWK28_16595 PF00762 Ferrochelatase GWK28_16605 PF01177 Asp/Glu/Hydantoin racemase GWK28_16625 PF01206 Sulfurtransferase TusA GWK28_16630 PF00571 CBS domain GWK28_16630 PF03471 Transporter associated domain GWK28_16635 PF00795 Carbon-nitrogen hydrolase GWK28_16640 PF01588 Putative tRNA binding domain GWK28_16650 PF07963 Prokaryotic N-terminal methylation motif GWK28_16650 PF08334 Type II secretion system (T2SS), protein G GWK28_16655 PF00482 Type II secretion system (T2SS), protein F GWK28_16660 PF00270 DEAD/DEAH box helicase GWK28_16660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GWK28_16660 PF18074 Primosomal protein N C-terminal domain GWK28_16660 PF17764 3′ DNA-binding domain (3′BD) GWK28_16660 PF00271 Helicase conserved C-terminal domain GWK28_16665 PF00999 Sodium/hydrogen exchanger family GWK28_16665 PF02254 TrkA-N domain GWK28_16670 PF01430 Hsp33 protein GWK28_16680 PF01556 DnaJ C terminal domain GWK28_16680 PF00226 DnaJ domain GWK28_16690 PF01544 CorA-like Mg2+ transporter protein GWK28_16695 PF03725 3' exoribonuclease family, domain 2 GWK28_16695 PF00575 S1 RNA binding domain GWK28_16695 PF00013 KH domain GWK28_16695 PF01138 3' exoribonuclease family, domain 1 GWK28_16695 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GWK28_16700 PF00312 Ribosomal protein S15 GWK28_16710 PF00144 Beta-lactamase GWK28_16715 PF13538 UvrD-like helicase C-terminal domain GWK28_16720 PF13361 UvrD-like helicase C-terminal domain GWK28_16720 PF00580 UvrD/REP helicase N-terminal domain GWK28_16720 PF12705 PD-(D/E)XK nuclease superfamily GWK28_16725 PF17946 RecC C-terminal domain GWK28_16735 PF03976 Polyphosphate kinase 2 (PPK2) GWK28_16745 PF01209 ubiE/COQ5 methyltransferase family GWK28_16755 PF03109 ABC1 family GWK28_16760 PF01494 FAD binding domain GWK28_16765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GWK28_16775 PF01502 Phosphoribosyl-AMP cyclohydrolase GWK28_16790 PF00361 Proton-conducting membrane transporter GWK28_16790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GWK28_16790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GWK28_16790 PF13244 Domain of unknown function (DUF4040) GWK28_16795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GWK28_16800 PF00361 Proton-conducting membrane transporter GWK28_16805 PF01899 Na+/H+ ion antiporter subunit GWK28_16810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GWK28_16815 PF03334 Na+/H+ antiporter subunit GWK28_16820 PF02033 Ribosome-binding factor A GWK28_16825 PF04760 Translation initiation factor IF-2, N-terminal region GWK28_16825 PF11987 Translation-initiation factor 2 GWK28_16825 PF00009 Elongation factor Tu GTP binding domain GWK28_16825 PF08364 Bacterial translation initiation factor IF-2 associated region GWK28_16830 PF13184 NusA-like KH domain GWK28_16830 PF08529 NusA N-terminal domain GWK28_16830 PF00575 S1 RNA binding domain GWK28_16835 PF17384 RimP C-terminal SH3 domain GWK28_16835 PF02576 RimP N-terminal domain GWK28_16855 PF03840 Preprotein translocase SecG subunit GWK28_16860 PF00121 Triosephosphate isomerase GWK28_16865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GWK28_16865 PF00437 Type II/IV secretion system protein GWK28_16870 PF00482 Type II secretion system (T2SS), protein F GWK28_16875 PF01478 Type IV leader peptidase family GWK28_16875 PF06750 Bacterial Peptidase A24 N-terminal domain GWK28_16880 PF01121 Dephospho-CoA kinase GWK28_16890 PF00588 SpoU rRNA Methylase family GWK28_16890 PF08032 RNA 2'-O ribose methyltransferase substrate binding GWK28_16895 PF06865 Pyrimidine/purine nucleoside phosphorylase GWK28_16905 PF02463 RecF/RecN/SMC N terminal domain GWK28_16910 PF02622 Uncharacterized ACR, COG1678 GWK28_16915 PF03652 Holliday junction resolvase GWK28_16920 PF13533 Biotin-lipoyl like GWK28_16945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GWK28_16945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GWK28_16945 PF12833 Helix-turn-helix domain GWK28_16945 PF02805 Metal binding domain of Ada GWK28_16950 PF01066 CDP-alcohol phosphatidyltransferase GWK28_16960 PF02151 UvrB/uvrC motif GWK28_16960 PF01541 GIY-YIG catalytic domain GWK28_16960 PF08459 UvrC Helix-hairpin-helix N-terminal GWK28_16980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GWK28_16980 PF00378 Enoyl-CoA hydratase/isomerase GWK28_16980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GWK28_16985 PF00108 Thiolase, N-terminal domain GWK28_16985 PF02803 Thiolase, C-terminal domain GWK28_17005 PF09278 MerR, DNA binding GWK28_17005 PF00376 MerR family regulatory protein GWK28_17015 PF01323 DSBA-like thioredoxin domain GWK28_17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_17030 PF00183 Hsp90 protein GWK28_17045 PF03553 Na+/H+ antiporter family GWK28_17045 PF13726 Na+-H+ antiporter family GWK28_17070 PF05000 RNA polymerase Rpb1, domain 4 GWK28_17070 PF04983 RNA polymerase Rpb1, domain 3 GWK28_17070 PF00623 RNA polymerase Rpb1, domain 2 GWK28_17070 PF04997 RNA polymerase Rpb1, domain 1 GWK28_17070 PF04998 RNA polymerase Rpb1, domain 5 GWK28_17075 PF04560 RNA polymerase Rpb2, domain 7 GWK28_17075 PF00562 RNA polymerase Rpb2, domain 6 GWK28_17075 PF10385 RNA polymerase beta subunit external 1 domain GWK28_17075 PF04565 RNA polymerase Rpb2, domain 3 GWK28_17075 PF04561 RNA polymerase Rpb2, domain 2 GWK28_17075 PF04563 RNA polymerase beta subunit GWK28_17080 PF16320 Ribosomal protein L7/L12 dimerisation domain GWK28_17080 PF00542 Ribosomal protein L7/L12 C-terminal domain GWK28_17085 PF00466 Ribosomal protein L10 GWK28_17090 PF00687 Ribosomal protein L1p/L10e family GWK28_17095 PF00298 Ribosomal protein L11, RNA binding domain GWK28_17095 PF03946 Ribosomal protein L11, N-terminal domain GWK28_17100 PF00467 KOW motif GWK28_17100 PF02357 Transcription termination factor nusG GWK28_17105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GWK28_17115 PF03143 Elongation factor Tu C-terminal domain GWK28_17115 PF03144 Elongation factor Tu domain 2 GWK28_17115 PF00009 Elongation factor Tu GTP binding domain GWK28_17140 PF04715 Anthranilate synthase component I, N terminal region GWK28_17140 PF00425 chorismate binding enzyme GWK28_17145 PF13419 Haloacid dehalogenase-like hydrolase GWK28_17150 PF00498 FHA domain GWK28_17150 PF12401 Protein of unknown function (DUF2662) GWK28_17155 PF00263 Bacterial type II and III secretion system protein GWK28_17155 PF03958 Bacterial type II/III secretion system short domain GWK28_17170 PF00816 H-NS histone family GWK28_17195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GWK28_17195 PF03900 Porphobilinogen deaminase, C-terminal domain GWK28_17200 PF04397 LytTr DNA-binding domain GWK28_17200 PF00072 Response regulator receiver domain GWK28_17205 PF06580 Histidine kinase GWK28_17205 PF07694 5TMR of 5TMR-LYT GWK28_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_17210 PF00206 Lyase GWK28_17210 PF14698 Argininosuccinate lyase C-terminal GWK28_17215 PF04362 Bacterial Fe(2+) trafficking GWK28_17220 PF01895 PhoU domain GWK28_17225 PF02321 Outer membrane efflux protein GWK28_17230 PF00892 EamA-like transporter family GWK28_17245 PF01964 Radical SAM ThiC family GWK28_17245 PF13667 ThiC-associated domain GWK28_17250 PF00293 NUDIX domain GWK28_17255 PF00149 Calcineurin-like phosphoesterase GWK28_17260 PF01258 Prokaryotic dksA/traR C4-type zinc finger GWK28_17265 PF00749 tRNA synthetases class I (E and Q), catalytic domain GWK28_17270 PF01098 Cell cycle protein GWK28_17275 PF08245 Mur ligase middle domain GWK28_17275 PF02875 Mur ligase family, glutamate ligase domain GWK28_17285 PF07670 Nucleoside recognition GWK28_17285 PF07664 Ferrous iron transport protein B C terminus GWK28_17285 PF02421 Ferrous iron transport protein B GWK28_17295 PF00589 Phage integrase family GWK28_17295 PF02899 Phage integrase, N-terminal SAM-like domain GWK28_17300 PF13098 Thioredoxin-like domain GWK28_17300 PF10411 Disulfide bond isomerase protein N-terminus GWK28_17305 PF03447 Homoserine dehydrogenase, NAD binding domain GWK28_17305 PF01842 ACT domain GWK28_17305 PF00742 Homoserine dehydrogenase GWK28_17310 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_17315 PF00768 D-alanyl-D-alanine carboxypeptidase GWK28_17320 PF00072 Response regulator receiver domain GWK28_17320 PF00196 Bacterial regulatory proteins, luxR family GWK28_17325 PF00512 His Kinase A (phospho-acceptor) domain GWK28_17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_17330 PF02954 Bacterial regulatory protein, Fis family GWK28_17330 PF00158 Sigma-54 interaction domain GWK28_17330 PF00072 Response regulator receiver domain GWK28_17335 PF00595 PDZ domain GWK28_17335 PF03572 Peptidase family S41 GWK28_17340 PF01676 Metalloenzyme superfamily GWK28_17340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GWK28_17345 PF03739 Lipopolysaccharide export system permease LptF/LptG GWK28_17355 PF00883 Cytosol aminopeptidase family, catalytic domain GWK28_17355 PF02789 Cytosol aminopeptidase family, N-terminal domain GWK28_17375 PF00677 Lumazine binding domain GWK28_17385 PF01872 RibD C-terminal domain GWK28_17385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GWK28_17390 PF03477 ATP cone domain GWK28_17395 PF00909 Ammonium Transporter Family GWK28_17400 PF00543 Nitrogen regulatory protein P-II GWK28_17410 PF01078 Magnesium chelatase, subunit ChlI GWK28_17410 PF13335 Magnesium chelatase, subunit ChlI C-terminal GWK28_17415 PF00392 Bacterial regulatory proteins, gntR family GWK28_17415 PF00155 Aminotransferase class I and II GWK28_17425 PF00701 Dihydrodipicolinate synthetase family GWK28_17435 PF03573 outer membrane porin, OprD family GWK28_17440 PF00719 Inorganic pyrophosphatase GWK28_17455 PF00501 AMP-binding enzyme GWK28_17455 PF13193 AMP-binding enzyme C-terminal domain GWK28_17460 PF00521 DNA gyrase/topoisomerase IV, subunit A GWK28_17460 PF03989 DNA gyrase C-terminal domain, beta-propeller GWK28_17465 PF07690 Major Facilitator Superfamily GWK28_17470 PF03458 UPF0126 domain GWK28_17475 PF02810 SEC-C motif GWK28_17480 PF03471 Transporter associated domain GWK28_17480 PF03741 Integral membrane protein TerC family GWK28_17485 PF03641 Possible lysine decarboxylase GWK28_17490 PF07690 Major Facilitator Superfamily GWK28_17500 PF00817 impB/mucB/samB family GWK28_17500 PF11799 impB/mucB/samB family C-terminal domain GWK28_17500 PF11798 IMS family HHH motif GWK28_17505 PF00072 Response regulator receiver domain GWK28_17505 PF00486 Transcriptional regulatory protein, C terminal GWK28_17510 PF00672 HAMP domain GWK28_17510 PF00512 His Kinase A (phospho-acceptor) domain GWK28_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_17515 PF06123 Inner membrane protein CreD GWK28_17535 PF04055 Radical SAM superfamily GWK28_17535 PF08497 Radical SAM N-terminal GWK28_17535 PF11842 Domain of unknown function (DUF3362) GWK28_17555 PF03358 NADPH-dependent FMN reductase GWK28_17565 PF00291 Pyridoxal-phosphate dependent enzyme GWK28_17600 PF00440 Bacterial regulatory proteins, tetR family GWK28_17625 PF01327 Polypeptide deformylase GWK28_17635 PF02481 DNA recombination-mediator protein A GWK28_17635 PF17782 DprA winged helix domain GWK28_17640 PF01300 Telomere recombination GWK28_17645 PF00892 EamA-like transporter family GWK28_17650 PF00440 Bacterial regulatory proteins, tetR family GWK28_17655 PF07690 Major Facilitator Superfamily GWK28_17670 PF00255 Glutathione peroxidase GWK28_17680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GWK28_17685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GWK28_17685 PF02874 ATP synthase alpha/beta family, beta-barrel domain GWK28_17690 PF00231 ATP synthase GWK28_17695 PF00306 ATP synthase alpha/beta chain, C terminal domain GWK28_17695 PF02874 ATP synthase alpha/beta family, beta-barrel domain GWK28_17695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GWK28_17700 PF00213 ATP synthase delta (OSCP) subunit GWK28_17705 PF00430 ATP synthase B/B' CF(0) GWK28_17710 PF00137 ATP synthase subunit C GWK28_17715 PF00119 ATP synthase A chain GWK28_17735 PF00005 ABC transporter GWK28_17740 PF00950 ABC 3 transport family GWK28_17745 PF01810 LysE type translocator GWK28_17750 PF04261 Dyp-type peroxidase family GWK28_17755 PF00390 Malic enzyme, N-terminal domain GWK28_17755 PF03949 Malic enzyme, NAD binding domain GWK28_17760 PF03485 Arginyl tRNA synthetase N terminal domain GWK28_17760 PF05746 DALR anticodon binding domain GWK28_17760 PF00750 tRNA synthetases class I (R) GWK28_17780 PF05726 Pirin C-terminal cupin domain GWK28_17780 PF02678 Pirin GWK28_17790 PF03551 Transcriptional regulator PadR-like family GWK28_17795 PF01909 Nucleotidyltransferase domain GWK28_17795 PF13427 Domain of unknown function (DUF4111) GWK28_17800 PF02540 NAD synthase GWK28_17800 PF00958 GMP synthase C terminal domain GWK28_17800 PF00117 Glutamine amidotransferase class-I GWK28_17805 PF04286 Protein of unknown function (DUF445) GWK28_17810 PF07681 DoxX GWK28_17815 PF09335 SNARE associated Golgi protein GWK28_17830 PF13614 AAA domain GWK28_17840 PF01722 BolA-like protein GWK28_17855 PF01648 4'-phosphopantetheinyl transferase superfamily GWK28_17860 PF16363 GDP-mannose 4,6 dehydratase GWK28_17875 PF00975 Thioesterase domain GWK28_17875 PF00550 Phosphopantetheine attachment site GWK28_17875 PF00668 Condensation domain GWK28_17875 PF13193 AMP-binding enzyme C-terminal domain GWK28_17875 PF00501 AMP-binding enzyme GWK28_17880 PF08242 Methyltransferase domain GWK28_17880 PF00109 Beta-ketoacyl synthase, N-terminal domain GWK28_17880 PF00975 Thioesterase domain GWK28_17880 PF16197 Ketoacyl-synthetase C-terminal extension GWK28_17880 PF00550 Phosphopantetheine attachment site GWK28_17880 PF14765 Polyketide synthase dehydratase GWK28_17880 PF02801 Beta-ketoacyl synthase, C-terminal domain GWK28_17885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_17885 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_17885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_17890 PF00501 AMP-binding enzyme GWK28_17895 PF03472 Autoinducer binding domain GWK28_17895 PF00196 Bacterial regulatory proteins, luxR family GWK28_17905 PF00765 Autoinducer synthase GWK28_17910 PF00083 Sugar (and other) transporter GWK28_17910 PF07690 Major Facilitator Superfamily GWK28_17915 PF00378 Enoyl-CoA hydratase/isomerase GWK28_17920 PF00378 Enoyl-CoA hydratase/isomerase GWK28_17925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GWK28_17925 PF02770 Acyl-CoA dehydrogenase, middle domain GWK28_17925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GWK28_17930 PF13193 AMP-binding enzyme C-terminal domain GWK28_17930 PF00501 AMP-binding enzyme GWK28_17935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GWK28_17935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GWK28_17940 PF00171 Aldehyde dehydrogenase family GWK28_17950 PF00324 Amino acid permease GWK28_17955 PF00324 Amino acid permease GWK28_17960 PF01042 Endoribonuclease L-PSP GWK28_17965 PF01168 Alanine racemase, N-terminal domain GWK28_17965 PF00842 Alanine racemase, C-terminal domain GWK28_17970 PF01266 FAD dependent oxidoreductase GWK28_17975 PF01037 Lrp/AsnC ligand binding domain GWK28_17985 PF00593 TonB dependent receptor GWK28_17985 PF07715 TonB-dependent Receptor Plug Domain GWK28_18000 PF00849 RNA pseudouridylate synthase GWK28_18055 PF13296 Putative type VI secretion system Rhs element Vgr GWK28_18055 PF04717 Type VI secretion system, phage-baseplate injector GWK28_18055 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) GWK28_18085 PF00694 Aconitase C-terminal domain GWK28_18085 PF00330 Aconitase family (aconitate hydratase) GWK28_18090 PF00285 Citrate synthase, C-terminal domain GWK28_18100 PF07729 FCD domain GWK28_18100 PF00392 Bacterial regulatory proteins, gntR family GWK28_18110 PF00155 Aminotransferase class I and II GWK28_18115 PF09330 D-lactate dehydrogenase, membrane binding GWK28_18115 PF01565 FAD binding domain GWK28_18120 PF01070 FMN-dependent dehydrogenase GWK28_18125 PF07729 FCD domain GWK28_18125 PF00392 Bacterial regulatory proteins, gntR family GWK28_18130 PF02652 L-lactate permease GWK28_18135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GWK28_18135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GWK28_18135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GWK28_18135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GWK28_18145 PF16363 GDP-mannose 4,6 dehydratase GWK28_18150 PF00342 Phosphoglucose isomerase GWK28_18155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GWK28_18155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GWK28_18155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GWK28_18160 PF00483 Nucleotidyl transferase GWK28_18165 PF02397 Bacterial sugar transferase GWK28_18170 PF00535 Glycosyl transferase family 2 GWK28_18175 PF00534 Glycosyl transferases group 1 GWK28_18180 PF00535 Glycosyl transferase family 2 GWK28_18190 PF00535 Glycosyl transferase family 2 GWK28_18200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GWK28_18205 PF05523 WxcM-like, C-terminal GWK28_18210 PF00483 Nucleotidyl transferase GWK28_18215 PF16363 GDP-mannose 4,6 dehydratase GWK28_18220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GWK28_18220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GWK28_18220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GWK28_18225 PF10531 SLBB domain GWK28_18225 PF02563 Polysaccharide biosynthesis/export protein GWK28_18225 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GWK28_18230 PF01451 Low molecular weight phosphotyrosine protein phosphatase GWK28_18235 PF13614 AAA domain GWK28_18235 PF13807 G-rich domain on putative tyrosine kinase GWK28_18235 PF02706 Chain length determinant protein GWK28_18240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_18240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GWK28_18245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GWK28_18245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_18250 PF03023 Lipid II flippase MurJ GWK28_18255 PF01510 N-acetylmuramoyl-L-alanine amidase GWK28_18260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GWK28_18260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GWK28_18270 PF05506 Domain of unknown function (DUF756) GWK28_18270 PF04185 Phosphoesterase family GWK28_18280 PF01138 3' exoribonuclease family, domain 1 GWK28_18280 PF03725 3' exoribonuclease family, domain 2 GWK28_18285 PF00487 Fatty acid desaturase GWK28_18290 PF00175 Oxidoreductase NAD-binding domain GWK28_18295 PF00440 Bacterial regulatory proteins, tetR family GWK28_18300 PF00440 Bacterial regulatory proteins, tetR family GWK28_18300 PF08360 QacR-like protein, C-terminal region GWK28_18305 PF01323 DSBA-like thioredoxin domain GWK28_18315 PF13419 Haloacid dehalogenase-like hydrolase GWK28_18320 PF00106 short chain dehydrogenase GWK28_18335 PF00583 Acetyltransferase (GNAT) family GWK28_18335 PF00696 Amino acid kinase family GWK28_18340 PF09084 NMT1/THI5 like GWK28_18345 PF09084 NMT1/THI5 like GWK28_18350 PF00296 Luciferase-like monooxygenase GWK28_18355 PF00528 Binding-protein-dependent transport system inner membrane component GWK28_18360 PF00005 ABC transporter GWK28_18365 PF00440 Bacterial regulatory proteins, tetR family GWK28_18365 PF08362 YcdC-like protein, C-terminal region GWK28_18370 PF01048 Phosphorylase superfamily GWK28_18380 PF01687 Riboflavin kinase GWK28_18380 PF06574 FAD synthetase GWK28_18385 PF06827 Zinc finger found in FPG and IleRS GWK28_18385 PF08264 Anticodon-binding domain of tRNA GWK28_18385 PF00133 tRNA synthetases class I (I, L, M and V) GWK28_18390 PF01252 Signal peptidase (SPase) II GWK28_18395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GWK28_18435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GWK28_18440 PF07859 alpha/beta hydrolase fold GWK28_18465 PF01025 GrpE GWK28_18470 PF00012 Hsp70 protein GWK28_18490 PF13406 Transglycosylase SLT domain GWK28_18495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GWK28_18495 PF02222 ATP-grasp domain GWK28_18500 PF00731 AIR carboxylase GWK28_18510 PF02875 Mur ligase family, glutamate ligase domain GWK28_18510 PF08245 Mur ligase middle domain GWK28_18510 PF01225 Mur ligase family, catalytic domain GWK28_18520 PF01569 PAP2 superfamily GWK28_18525 PF03741 Integral membrane protein TerC family GWK28_18535 PF03738 Glutathionylspermidine synthase preATP-grasp GWK28_18540 PF00355 Rieske [2Fe-2S] domain GWK28_18545 PF01979 Amidohydrolase family GWK28_18550 PF00156 Phosphoribosyl transferase domain GWK28_18560 PF10411 Disulfide bond isomerase protein N-terminus GWK28_18560 PF13098 Thioredoxin-like domain GWK28_18565 PF16916 Dimerisation domain of Zinc Transporter GWK28_18565 PF01545 Cation efflux family GWK28_18570 PF02583 Metal-sensitive transcriptional repressor GWK28_18575 PF10396 GTP-binding protein TrmE N-terminus GWK28_18575 PF01926 50S ribosome-binding GTPase GWK28_18575 PF12631 MnmE helical domain GWK28_18580 PF14849 YidC periplasmic domain GWK28_18580 PF02096 60Kd inner membrane protein GWK28_18585 PF01809 Putative membrane protein insertion efficiency factor GWK28_18590 PF00825 Ribonuclease P GWK28_18595 PF00468 Ribosomal protein L34 GWK28_18645 PF00268 Ribonucleotide reductase, small chain GWK28_18650 PF02867 Ribonucleotide reductase, barrel domain GWK28_18650 PF00317 Ribonucleotide reductase, all-alpha domain GWK28_18650 PF03477 ATP cone domain GWK28_18670 PF06470 SMC proteins Flexible Hinge Domain GWK28_18670 PF02463 RecF/RecN/SMC N terminal domain GWK28_18695 PF00154 recA bacterial DNA recombination protein GWK28_18695 PF03161 LAGLIDADG DNA endonuclease family GWK28_18700 PF01367 5'-3' exonuclease, C-terminal SAM fold GWK28_18700 PF00476 DNA polymerase family A GWK28_18700 PF01612 3'-5' exonuclease GWK28_18700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GWK28_18715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GWK28_18715 PF14579 Helix-hairpin-helix motif GWK28_18715 PF02811 PHP domain GWK28_18715 PF07733 Bacterial DNA polymerase III alpha NTPase domain GWK28_18725 PF07733 Bacterial DNA polymerase III alpha NTPase domain GWK28_18725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GWK28_18725 PF02811 PHP domain GWK28_18725 PF14579 Helix-hairpin-helix motif GWK28_18760 PF00589 Phage integrase family GWK28_18760 PF02899 Phage integrase, N-terminal SAM-like domain GWK28_18770 PF07015 VirC1 protein GWK28_18785 PF00625 Guanylate kinase GWK28_18820 PF10410 DnaB-helicase binding domain of primase GWK28_18820 PF01807 CHC2 zinc finger GWK28_18820 PF08275 DNA primase catalytic core, N-terminal domain GWK28_18945 PF09383 NIL domain GWK28_18945 PF00005 ABC transporter GWK28_18965 PF17757 UvrB interaction domain GWK28_18965 PF03461 TRCF domain GWK28_18965 PF00271 Helicase conserved C-terminal domain GWK28_18965 PF00270 DEAD/DEAH box helicase GWK28_18965 PF02559 CarD-like/TRCF domain GWK28_18980 PF00746 LPXTG cell wall anchor motif GWK28_18980 PF01476 LysM domain GWK28_18980 PF03373 Octapeptide repeat GWK28_18980 PF04650 YSIRK type signal peptide GWK28_18980 PF02216 B domain GWK28_19035 PF03895 YadA-like membrane anchor domain GWK28_19035 PF13018 Extended Signal Peptide of Type V secretion system GWK28_19035 PF13018 Extended Signal Peptide of Type V secretion system GWK28_19035 PF03895 YadA-like membrane anchor domain GWK28_19035 PF05658 Head domain of trimeric autotransporter adhesin GWK28_19035 PF05662 Coiled stalk of trimeric autotransporter adhesin GWK28_19035 PF05662 Coiled stalk of trimeric autotransporter adhesin GWK28_19035 PF05658 Head domain of trimeric autotransporter adhesin GWK28_19040 PF04355 SmpA / OmlA family GWK28_19040 PF00691 OmpA family GWK28_19055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GWK28_19055 PF18766 SWI2/SNF2 ATPase GWK28_19055 PF12008 Type I restriction and modification enzyme - subunit R C terminal GWK28_19070 PF12161 HsdM N-terminal domain GWK28_19070 PF02384 N-6 DNA Methylase GWK28_19115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GWK28_19165 PF02661 Fic/DOC family GWK28_19195 PF00872 Transposase, Mutator family GWK28_19200 PF13087 AAA domain GWK28_19200 PF13195 Protein of unknown function (DUF4011) GWK28_19200 PF13086 AAA domain GWK28_19200 PF13087 AAA domain GWK28_19200 PF13195 Protein of unknown function (DUF4011) GWK28_19200 PF13086 AAA domain GWK28_19280 PF13356 Arm DNA-binding domain GWK28_19280 PF00589 Phage integrase family GWK28_19305 PF02522 Aminoglycoside 3-N-acetyltransferase GWK28_19345 PF00905 Penicillin binding protein transpeptidase domain GWK28_19360 PF01381 Helix-turn-helix GWK28_19365 PF05973 Phage derived protein Gp49-like (DUF891) GWK28_19370 PF00665 Integrase core domain GWK28_19370 PF13936 Helix-turn-helix domain GWK28_19385 PF00118 TCP-1/cpn60 chaperonin family GWK28_19390 PF00166 Chaperonin 10 Kd subunit GWK28_19395 PF03091 CutA1 divalent ion tolerance protein GWK28_19400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GWK28_19405 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GWK28_19415 PF00753 Metallo-beta-lactamase superfamily GWK28_19420 PF00665 Integrase core domain GWK28_19420 PF13936 Helix-turn-helix domain GWK28_19450 PF13610 DDE domain GWK28_19465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GWK28_19465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GWK28_19465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GWK28_19465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GWK28_19470 PF00809 Pterin binding enzyme GWK28_19480 PF13610 DDE domain GWK28_19485 PF00239 Resolvase, N terminal domain GWK28_19485 PF02796 Helix-turn-helix domain of resolvase GWK28_19500 PF00529 HlyD membrane-fusion protein of T1SS GWK28_19500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GWK28_19505 PF00873 AcrB/AcrD/AcrF family GWK28_19510 PF07690 Major Facilitator Superfamily GWK28_19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GWK28_19515 PF18698 Histidine kinase sensor domain GWK28_19515 PF00672 HAMP domain GWK28_19515 PF00512 His Kinase A (phospho-acceptor) domain GWK28_19515 PF00989 PAS fold GWK28_19520 PF00486 Transcriptional regulatory protein, C terminal GWK28_19520 PF00072 Response regulator receiver domain GWK28_19535 PF00005 ABC transporter GWK28_19535 PF12848 ABC transporter GWK28_19540 PF01636 Phosphotransferase enzyme family GWK28_19545 PF02796 Helix-turn-helix domain of resolvase GWK28_19545 PF00239 Resolvase, N terminal domain GWK28_19555 PF00440 Bacterial regulatory proteins, tetR family GWK28_19555 PF02909 Tetracyclin repressor-like, C-terminal domain GWK28_19560 PF07690 Major Facilitator Superfamily GWK28_19570 PF13610 DDE domain GWK28_19585 PF13438 Domain of unknown function (DUF4113) GWK28_19585 PF11799 impB/mucB/samB family C-terminal domain GWK28_19585 PF00817 impB/mucB/samB family GWK28_19590 PF00717 Peptidase S24-like GWK28_19595 PF02384 N-6 DNA Methylase GWK28_19605 PF13610 DDE domain GWK28_19610 PF09278 MerR, DNA binding GWK28_19610 PF00376 MerR family regulatory protein GWK28_19620 PF00403 Heavy-metal-associated domain GWK28_19625 PF03203 MerC mercury resistance protein GWK28_19630 PF00403 Heavy-metal-associated domain GWK28_19630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GWK28_19630 PF07992 Pyridine nucleotide-disulphide oxidoreductase GWK28_19635 PF13411 MerR HTH family regulatory protein GWK28_19640 PF05052 MerE protein GWK28_19645 PF00563 EAL domain GWK28_19645 PF11809 Domain of unknown function (DUF3330) GWK28_19650 PF01051 Initiator Replication protein GWK28_19665 PF00872 Transposase, Mutator family GWK28_19695 PF00313 'Cold-shock' DNA-binding domain