locus-tag class description AB987_0002 PF00440 Bacterial regulatory proteins, tetR family AB987_0003 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_0003 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_0003 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_0004 PF01039 Carboxyl transferase domain AB987_0005 PF00378 Enoyl-CoA hydratase/isomerase AB987_0006 PF00289 Biotin carboxylase, N-terminal domain AB987_0006 PF02785 Biotin carboxylase C-terminal domain AB987_0006 PF00364 Biotin-requiring enzyme AB987_0006 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_0007 PF00682 HMGL-like AB987_0008 PF03466 LysR substrate binding domain AB987_0008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0011 PF01810 LysE type translocator AB987_0012 PF13737 Transposase DDE domain AB987_0013 PF13419 Haloacid dehalogenase-like hydrolase AB987_0014 PF00266 Aminotransferase class-V AB987_0015 PF01266 FAD dependent oxidoreductase AB987_0016 PF00528 Binding-protein-dependent transport system inner membrane component AB987_0017 PF08402 TOBE domain AB987_0017 PF00005 ABC transporter AB987_0020 PF00392 Bacterial regulatory proteins, gntR family AB987_0020 PF07702 UTRA domain AB987_0021 PF01494 FAD binding domain AB987_0022 PF09339 IclR helix-turn-helix domain AB987_0022 PF01614 Bacterial transcriptional regulator AB987_0023 PF02525 Flavodoxin-like fold AB987_0024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0024 PF03466 LysR substrate binding domain AB987_0026 PF13936 Helix-turn-helix domain AB987_0026 PF00665 Integrase core domain AB987_0027 PF07690 Major Facilitator Superfamily AB987_0028 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0028 PF00175 Oxidoreductase NAD-binding domain AB987_0030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB987_0030 PF00355 Rieske [2Fe-2S] domain AB987_0032 PF01425 Amidase AB987_0033 PF01292 Prokaryotic cytochrome b561 AB987_0034 PF00199 Catalase AB987_0035 PF13737 Transposase DDE domain AB987_0036 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_0037 PF08223 PaaX-like protein C-terminal domain AB987_0037 PF07848 PaaX-like protein AB987_0038 PF00501 AMP-binding enzyme AB987_0038 PF14535 AMP-binding enzyme C-terminal domain AB987_0039 PF02803 Thiolase, C-terminal domain AB987_0039 PF00108 Thiolase, N-terminal domain AB987_0040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB987_0040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB987_0040 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB987_0041 PF00378 Enoyl-CoA hydratase/isomerase AB987_0042 PF00378 Enoyl-CoA hydratase/isomerase AB987_0043 PF00970 Oxidoreductase FAD-binding domain AB987_0043 PF00175 Oxidoreductase NAD-binding domain AB987_0043 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0044 PF01883 Iron-sulfur cluster assembly protein AB987_0045 PF05138 Phenylacetic acid catabolic protein AB987_0046 PF06243 Phenylacetic acid degradation B AB987_0047 PF05138 Phenylacetic acid catabolic protein AB987_0048 PF00171 Aldehyde dehydrogenase family AB987_0048 PF01575 MaoC like domain AB987_0049 PF03315 Serine dehydratase beta chain AB987_0049 PF03313 Serine dehydratase alpha chain AB987_0050 PF13520 Amino acid permease AB987_0051 PF00171 Aldehyde dehydrogenase family AB987_0052 PF00083 Sugar (and other) transporter AB987_0054 PF00872 Transposase, Mutator family AB987_0056 PF04324 BFD-like [2Fe-2S] binding domain AB987_0056 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0058 PF01266 FAD dependent oxidoreductase AB987_0058 PF01266 FAD dependent oxidoreductase AB987_0059 PF05544 Proline racemase AB987_0060 PF00392 Bacterial regulatory proteins, gntR family AB987_0062 PF00701 Dihydrodipicolinate synthetase family AB987_0064 PF09278 MerR, DNA binding AB987_0064 PF00376 MerR family regulatory protein AB987_0065 PF13737 Transposase DDE domain AB987_0068 PF00005 ABC transporter AB987_0069 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB987_0070 PF01425 Amidase AB987_0071 PF01402 Ribbon-helix-helix protein, copG family AB987_0071 PF08753 NikR C terminal nickel binding domain AB987_0073 PF01638 HxlR-like helix-turn-helix AB987_0074 PF02525 Flavodoxin-like fold AB987_0075 PF00289 Biotin carboxylase, N-terminal domain AB987_0075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_0075 PF02785 Biotin carboxylase C-terminal domain AB987_0079 PF00107 Zinc-binding dehydrogenase AB987_0079 PF08240 Alcohol dehydrogenase GroES-like domain AB987_0079 PF13823 Alcohol dehydrogenase GroES-associated AB987_0082 PF00440 Bacterial regulatory proteins, tetR family AB987_0084 PF13276 HTH-like domain AB987_0084 PF13333 Integrase core domain AB987_0084 PF00665 Integrase core domain AB987_0085 PF13737 Transposase DDE domain AB987_0089 PF00665 Integrase core domain AB987_0089 PF13936 Helix-turn-helix domain AB987_0090 PF13737 Transposase DDE domain AB987_0095 PF13276 HTH-like domain AB987_0095 PF13333 Integrase core domain AB987_0095 PF00665 Integrase core domain AB987_0098 PF00654 Voltage gated chloride channel AB987_0099 PF00289 Biotin carboxylase, N-terminal domain AB987_0099 PF02785 Biotin carboxylase C-terminal domain AB987_0099 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_0099 PF00364 Biotin-requiring enzyme AB987_0101 PF07286 Protein of unknown function (DUF1445) AB987_0102 PF03746 LamB/YcsF family AB987_0103 PF01566 Natural resistance-associated macrophage protein AB987_0104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0104 PF03466 LysR substrate binding domain AB987_0109 PF13737 Transposase DDE domain AB987_0113 PF13737 Transposase DDE domain AB987_0116 PF13737 Transposase DDE domain AB987_0118 PF03279 Bacterial lipid A biosynthesis acyltransferase AB987_0119 PF00990 Diguanylate cyclase, GGDEF domain AB987_0119 PF03707 Bacterial signalling protein N terminal repeat AB987_0119 PF00563 EAL domain AB987_0120 PF00892 EamA-like transporter family AB987_0121 PF01037 Lrp/AsnC ligand binding domain AB987_0123 PF00488 MutS domain V AB987_0123 PF05188 MutS domain II AB987_0123 PF05192 MutS domain III AB987_0123 PF05190 MutS family domain IV AB987_0123 PF01624 MutS domain I AB987_0125 PF00037 4Fe-4S binding domain AB987_0125 PF11953 Domain of unknown function (DUF3470) AB987_0127 PF01596 O-methyltransferase AB987_0129 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_0130 PF01205 Uncharacterized protein family UPF0029 AB987_0132 PF00005 ABC transporter AB987_0132 PF00664 ABC transporter transmembrane region AB987_0132 PF03412 Peptidase C39 family AB987_0133 PF02321 Outer membrane efflux protein AB987_0134 PF00005 ABC transporter AB987_0134 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB987_0135 PF03968 OstA-like protein AB987_0138 PF01380 SIS domain AB987_0138 PF00571 CBS domain AB987_0139 PF09190 DALR domain AB987_0139 PF01406 tRNA synthetases class I (C) catalytic domain AB987_0141 PF00589 Phage integrase family AB987_0145 PF13186 Iron-sulfur cluster-binding domain AB987_0169 PF00772 DnaB-like helicase N terminal domain AB987_0169 PF03796 DnaB-like helicase C terminal domain AB987_0192 PF13737 Transposase DDE domain AB987_0196 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB987_0196 PF03807 NADP oxidoreductase coenzyme F420-dependent AB987_0199 PF00665 Integrase core domain AB987_0199 PF13936 Helix-turn-helix domain AB987_0200 PF00665 Integrase core domain AB987_0200 PF13936 Helix-turn-helix domain AB987_0202 PF00313 'Cold-shock' DNA-binding domain AB987_0203 PF01810 LysE type translocator AB987_0210 PF13742 OB-fold nucleic acid binding domain AB987_0210 PF02601 Exonuclease VII, large subunit AB987_0217 PF09278 MerR, DNA binding AB987_0217 PF00376 MerR family regulatory protein AB987_0218 PF00403 Heavy-metal-associated domain AB987_0221 PF02954 Bacterial regulatory protein, Fis family AB987_0221 PF00158 Sigma-54 interaction domain AB987_0221 PF06505 Activator of aromatic catabolism AB987_0221 PF02830 V4R domain AB987_0222 PF06099 Phenol hydroxylase subunit AB987_0223 PF02332 Methane/Phenol/Toluene Hydroxylase AB987_0224 PF02406 MmoB/DmpM family AB987_0225 PF04945 YHS domain AB987_0225 PF02332 Methane/Phenol/Toluene Hydroxylase AB987_0227 PF00175 Oxidoreductase NAD-binding domain AB987_0227 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0227 PF00970 Oxidoreductase FAD-binding domain AB987_0229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0229 PF03466 LysR substrate binding domain AB987_0231 PF00355 Rieske [2Fe-2S] domain AB987_0231 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB987_0232 PF00866 Ring hydroxylating beta subunit AB987_0233 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0233 PF00970 Oxidoreductase FAD-binding domain AB987_0233 PF00175 Oxidoreductase NAD-binding domain AB987_0234 PF00106 short chain dehydrogenase AB987_0235 PF03594 Benzoate membrane transport protein AB987_0236 PF07690 Major Facilitator Superfamily AB987_0237 PF00872 Transposase, Mutator family AB987_0238 PF07690 Major Facilitator Superfamily AB987_0240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AB987_0240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AB987_0241 PF04408 Helicase associated domain (HA2) AB987_0241 PF00271 Helicase conserved C-terminal domain AB987_0241 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AB987_0241 PF00270 DEAD/DEAH box helicase AB987_0241 PF11898 Domain of unknown function (DUF3418) AB987_0242 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB987_0242 PF00578 AhpC/TSA family AB987_0246 PF13192 Thioredoxin domain AB987_0246 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0248 PF02798 Glutathione S-transferase, N-terminal domain AB987_0248 PF00043 Glutathione S-transferase, C-terminal domain AB987_0250 PF02390 Putative methyltransferase AB987_0251 PF13417 Glutathione S-transferase, N-terminal domain AB987_0251 PF00043 Glutathione S-transferase, C-terminal domain AB987_0253 PF13488 Glycine zipper AB987_0253 PF00691 OmpA family AB987_0254 PF01979 Amidohydrolase family AB987_0255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB987_0255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB987_0257 PF02926 THUMP domain AB987_0257 PF10672 S-adenosylmethionine-dependent methyltransferase AB987_0257 PF01170 Putative RNA methylase family UPF0020 AB987_0260 PF10431 C-terminal, D2-small domain, of ClpB protein AB987_0260 PF00004 ATPase family associated with various cellular activities (AAA) AB987_0260 PF07724 AAA domain (Cdc48 subfamily) AB987_0260 PF17871 AAA lid domain AB987_0260 PF02861 Clp amino terminal domain, pathogenicity island component AB987_0263 PF02566 OsmC-like protein AB987_0264 PF13545 Crp-like helix-turn-helix domain AB987_0264 PF00027 Cyclic nucleotide-binding domain AB987_0265 PF00248 Aldo/keto reductase family AB987_0268 PF00709 Adenylosuccinate synthetase AB987_0269 PF13393 Histidyl-tRNA synthetase AB987_0270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB987_0270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB987_0271 PF01411 tRNA synthetases class II (A) AB987_0271 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB987_0271 PF02272 DHHA1 domain AB987_0272 PF13356 Arm DNA-binding domain AB987_0272 PF00589 Phage integrase family AB987_0273 PF00717 Peptidase S24-like AB987_0274 PF13438 Domain of unknown function (DUF4113) AB987_0274 PF00817 impB/mucB/samB family AB987_0274 PF11799 impB/mucB/samB family C-terminal domain AB987_0274 PF11798 IMS family HHH motif AB987_0280 PF00149 Calcineurin-like phosphoesterase AB987_0299 PF06381 Protein of unknown function (DUF1073) AB987_0305 PF00665 Integrase core domain AB987_0305 PF13936 Helix-turn-helix domain AB987_0313 PF01695 IstB-like ATP binding protein AB987_0330 PF01842 ACT domain AB987_0330 PF00696 Amino acid kinase family AB987_0330 PF13840 ACT domain AB987_0331 PF02599 Global regulator protein family AB987_0332 PF01351 Ribonuclease HII AB987_0334 PF01292 Prokaryotic cytochrome b561 AB987_0335 PF00962 Adenosine/AMP deaminase AB987_0336 PF00860 Permease family AB987_0338 PF00743 Flavin-binding monooxygenase-like AB987_0339 PF00106 short chain dehydrogenase AB987_0341 PF17954 Quercetinase C-terminal cupin domain AB987_0341 PF02678 Pirin AB987_0342 PF17932 Tetracyclin repressor-like, C-terminal domain AB987_0342 PF00440 Bacterial regulatory proteins, tetR family AB987_0344 PF00106 short chain dehydrogenase AB987_0345 PF00743 Flavin-binding monooxygenase-like AB987_0346 PF04072 Leucine carboxyl methyltransferase AB987_0347 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0347 PF03466 LysR substrate binding domain AB987_0348 PF07690 Major Facilitator Superfamily AB987_0349 PF05681 Fumarate hydratase (Fumerase) AB987_0350 PF05683 Fumarase C-terminus AB987_0351 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB987_0351 PF12833 Helix-turn-helix domain AB987_0352 PF00743 Flavin-binding monooxygenase-like AB987_0354 PF00106 short chain dehydrogenase AB987_0355 PF00106 short chain dehydrogenase AB987_0356 PF07859 alpha/beta hydrolase fold AB987_0357 PF05199 GMC oxidoreductase AB987_0358 PF03573 outer membrane porin, OprD family AB987_0359 PF07690 Major Facilitator Superfamily AB987_0360 PF00884 Sulfatase AB987_0361 PF03781 Sulfatase-modifying factor enzyme 1 AB987_0363 PF00355 Rieske [2Fe-2S] domain AB987_0364 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0364 PF00175 Oxidoreductase NAD-binding domain AB987_0367 PF07690 Major Facilitator Superfamily AB987_0368 PF00378 Enoyl-CoA hydratase/isomerase AB987_0369 PF00171 Aldehyde dehydrogenase family AB987_0371 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_0371 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_0371 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_0372 PF03573 outer membrane porin, OprD family AB987_0375 PF07519 Tannase and feruloyl esterase AB987_0376 PF07729 FCD domain AB987_0376 PF00392 Bacterial regulatory proteins, gntR family AB987_0377 PF00171 Aldehyde dehydrogenase family AB987_0378 PF00701 Dihydrodipicolinate synthetase family AB987_0379 PF13378 Enolase C-terminal domain-like AB987_0380 PF07690 Major Facilitator Superfamily AB987_0381 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AB987_0381 PF08666 SAF domain AB987_0382 PF00892 EamA-like transporter family AB987_0383 PF12833 Helix-turn-helix domain AB987_0383 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB987_0384 PF00171 Aldehyde dehydrogenase family AB987_0386 PF13936 Helix-turn-helix domain AB987_0386 PF00665 Integrase core domain AB987_0387 PF00324 Amino acid permease AB987_0388 PF04958 Arginine N-succinyltransferase beta subunit AB987_0389 PF00202 Aminotransferase class-III AB987_0391 PF00171 Aldehyde dehydrogenase family AB987_0393 PF07729 FCD domain AB987_0393 PF00392 Bacterial regulatory proteins, gntR family AB987_0395 PF00324 Amino acid permease AB987_0396 PF01266 FAD dependent oxidoreductase AB987_0397 PF00324 Amino acid permease AB987_0398 PF13737 Transposase DDE domain AB987_0400 PF03180 NLPA lipoprotein AB987_0401 PF00665 Integrase core domain AB987_0401 PF13936 Helix-turn-helix domain AB987_0402 PF01494 FAD binding domain AB987_0403 PF13737 Transposase DDE domain AB987_0406 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0406 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_0407 PF00764 Arginosuccinate synthase AB987_0408 PF00563 EAL domain AB987_0408 PF00360 Phytochrome region AB987_0408 PF00990 Diguanylate cyclase, GGDEF domain AB987_0408 PF01590 GAF domain AB987_0409 PF01979 Amidohydrolase family AB987_0410 PF00929 Exonuclease AB987_0412 PF07715 TonB-dependent Receptor Plug Domain AB987_0412 PF00593 TonB dependent receptor AB987_0413 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0413 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_0414 PF00005 ABC transporter AB987_0414 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB987_0415 PF12911 N-terminal TM domain of oligopeptide transport permease C AB987_0415 PF00528 Binding-protein-dependent transport system inner membrane component AB987_0416 PF00528 Binding-protein-dependent transport system inner membrane component AB987_0417 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB987_0418 PF01476 LysM domain AB987_0418 PF01476 LysM domain AB987_0418 PF01464 Transglycosylase SLT domain AB987_0418 PF01464 Transglycosylase SLT domain AB987_0419 PF00929 Exonuclease AB987_0421 PF09297 NADH pyrophosphatase zinc ribbon domain AB987_0421 PF00293 NUDIX domain AB987_0423 PF04972 BON domain AB987_0424 PF02021 Uncharacterised protein family UPF0102 AB987_0426 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB987_0428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0428 PF03466 LysR substrate binding domain AB987_0429 PF01810 LysE type translocator AB987_0431 PF13411 MerR HTH family regulatory protein AB987_0434 PF01494 FAD binding domain AB987_0435 PF01494 FAD binding domain AB987_0436 PF00557 Metallopeptidase family M24 AB987_0436 PF05195 Aminopeptidase P, N-terminal domain AB987_0443 PF01812 5-formyltetrahydrofolate cyclo-ligase family AB987_0445 PF05658 Head domain of trimeric autotransporter adhesin AB987_0445 PF05662 Coiled stalk of trimeric autotransporter adhesin AB987_0445 PF13018 Extended Signal Peptide of Type V secretion system AB987_0445 PF03895 YadA-like membrane anchor domain AB987_0446 PF00004 ATPase family associated with various cellular activities (AAA) AB987_0446 PF05362 Lon protease (S16) C-terminal proteolytic domain AB987_0446 PF02190 ATP-dependent protease La (LON) substrate-binding domain AB987_0447 PF02590 Predicted SPOUT methyltransferase AB987_0448 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AB987_0450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB987_0450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB987_0451 PF04060 Putative Fe-S cluster AB987_0452 PF00730 HhH-GPD superfamily base excision DNA repair protein AB987_0452 PF00633 Helix-hairpin-helix motif AB987_0452 PF10576 Iron-sulfur binding domain of endonuclease III AB987_0454 PF05191 Adenylate kinase, active site lid AB987_0458 PF03717 Penicillin-binding Protein dimerisation domain AB987_0458 PF00905 Penicillin binding protein transpeptidase domain AB987_0461 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB987_0462 PF01730 UreF AB987_0463 PF05194 UreE urease accessory protein, C-terminal domain AB987_0463 PF02814 UreE urease accessory protein, N-terminal domain AB987_0464 PF00449 Urease alpha-subunit, N-terminal domain AB987_0464 PF01979 Amidohydrolase family AB987_0465 PF00699 Urease beta subunit AB987_0466 PF00547 Urease, gamma subunit AB987_0467 PF01774 UreD urease accessory protein AB987_0471 PF00463 Isocitrate lyase family AB987_0472 PF03466 LysR substrate binding domain AB987_0472 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0473 PF03471 Transporter associated domain AB987_0473 PF01595 Cyclin M transmembrane N-terminal domain AB987_0473 PF00571 CBS domain AB987_0475 PF03600 Citrate transporter AB987_0478 PF00009 Elongation factor Tu GTP binding domain AB987_0479 PF01507 Phosphoadenosine phosphosulfate reductase family AB987_0480 PF14052 Capsule assembly protein Wzi AB987_0481 PF00152 tRNA synthetases class II (D, K and N) AB987_0481 PF01336 OB-fold nucleic acid binding domain AB987_0484 PF00301 Rubredoxin AB987_0485 PF18113 Rubredoxin binding C-terminal domain AB987_0485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0486 PF00561 alpha/beta hydrolase fold AB987_0487 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0487 PF03466 LysR substrate binding domain AB987_0489 PF17941 Polyphosphate kinase C-terminal domain 1 AB987_0489 PF13089 Polyphosphate kinase N-terminal domain AB987_0489 PF02503 Polyphosphate kinase middle domain AB987_0489 PF13090 Polyphosphate kinase C-terminal domain 2 AB987_0490 PF00912 Transglycosylase AB987_0491 PF01694 Rhomboid family AB987_0493 PF00005 ABC transporter AB987_0494 PF13472 GDSL-like Lipase/Acylhydrolase family AB987_0495 PF00484 Carbonic anhydrase AB987_0496 PF00561 alpha/beta hydrolase fold AB987_0498 PF07715 TonB-dependent Receptor Plug Domain AB987_0498 PF00593 TonB dependent receptor AB987_0499 PF01106 NifU-like domain AB987_0499 PF01521 Iron-sulphur cluster biosynthesis AB987_0502 PF00884 Sulfatase AB987_0503 PF03781 Sulfatase-modifying factor enzyme 1 AB987_0507 PF00291 Pyridoxal-phosphate dependent enzyme AB987_0510 PF00291 Pyridoxal-phosphate dependent enzyme AB987_0511 PF01384 Phosphate transporter family AB987_0513 PF00809 Pterin binding enzyme AB987_0513 PF02965 Vitamin B12 dependent methionine synthase, activation domain AB987_0513 PF02310 B12 binding domain AB987_0513 PF02607 B12 binding domain AB987_0513 PF02574 Homocysteine S-methyltransferase AB987_0517 PF13737 Transposase DDE domain AB987_0518 PF02780 Transketolase, C-terminal domain AB987_0518 PF02779 Transketolase, pyrimidine binding domain AB987_0519 PF00456 Transketolase, thiamine diphosphate binding domain AB987_0520 PF07690 Major Facilitator Superfamily AB987_0522 PF03466 LysR substrate binding domain AB987_0522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0524 PF01263 Aldose 1-epimerase AB987_0525 PF07690 Major Facilitator Superfamily AB987_0526 PF02311 AraC-like ligand binding domain AB987_0526 PF12833 Helix-turn-helix domain AB987_0527 PF04960 Glutaminase AB987_0528 PF01327 Polypeptide deformylase AB987_0530 PF07690 Major Facilitator Superfamily AB987_0532 PF00205 Thiamine pyrophosphate enzyme, central domain AB987_0532 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB987_0532 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB987_0533 PF09339 IclR helix-turn-helix domain AB987_0533 PF01614 Bacterial transcriptional regulator AB987_0536 PF00378 Enoyl-CoA hydratase/isomerase AB987_0538 PF00535 Glycosyl transferase family 2 AB987_0539 PF14883 Hypothetical glycosyl hydrolase family 13 AB987_0539 PF01522 Polysaccharide deacetylase AB987_0540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_0541 PF07152 YaeQ protein AB987_0542 PF00872 Transposase, Mutator family AB987_0544 PF00375 Sodium:dicarboxylate symporter family AB987_0545 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB987_0545 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB987_0547 PF03061 Thioesterase superfamily AB987_0549 PF02028 BCCT, betaine/carnitine/choline family transporter AB987_0550 PF02028 BCCT, betaine/carnitine/choline family transporter AB987_0551 PF00440 Bacterial regulatory proteins, tetR family AB987_0551 PF13977 BetI-type transcriptional repressor, C-terminal AB987_0552 PF00171 Aldehyde dehydrogenase family AB987_0553 PF05199 GMC oxidoreductase AB987_0553 PF00732 GMC oxidoreductase AB987_0554 PF06039 Malate:quinone oxidoreductase (Mqo) AB987_0556 PF02574 Homocysteine S-methyltransferase AB987_0557 PF13520 Amino acid permease AB987_0559 PF13737 Transposase DDE domain AB987_0560 PF18019 HD domain AB987_0564 PF09615 CRISPR-associated protein (Cas_Csy3) AB987_0566 PF01867 CRISPR associated protein Cas1 AB987_0574 PF13737 Transposase DDE domain AB987_0576 PF13936 Helix-turn-helix domain AB987_0576 PF00665 Integrase core domain AB987_0579 PF00436 Single-strand binding protein family AB987_0584 PF10548 P22AR C-terminal domain AB987_0584 PF02498 BRO family, N-terminal domain AB987_0588 PF13356 Arm DNA-binding domain AB987_0588 PF00589 Phage integrase family AB987_0590 PF07690 Major Facilitator Superfamily AB987_0591 PF13533 Biotin-lipoyl like AB987_0592 PF03061 Thioesterase superfamily AB987_0593 PF00490 Delta-aminolevulinic acid dehydratase AB987_0594 PF01266 FAD dependent oxidoreductase AB987_0595 PF08338 Domain of unknown function (DUF1731) AB987_0595 PF01370 NAD dependent epimerase/dehydratase family AB987_0599 PF00149 Calcineurin-like phosphoesterase AB987_0599 PF12320 Type 5 capsule protein repressor C-terminal domain AB987_0601 PF01168 Alanine racemase, N-terminal domain AB987_0602 PF00437 Type II/IV secretion system protein AB987_0603 PF00437 Type II/IV secretion system protein AB987_0604 PF01475 Ferric uptake regulator family AB987_0605 PF04355 SmpA / OmlA family AB987_0606 PF03658 RnfH family Ubiquitin AB987_0608 PF01814 Hemerythrin HHE cation binding domain AB987_0609 PF13230 Glutamine amidotransferases class-II AB987_0611 PF00696 Amino acid kinase family AB987_0612 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB987_0612 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB987_0612 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB987_0612 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB987_0613 PF00692 dUTPase AB987_0614 PF00580 UvrD/REP helicase N-terminal domain AB987_0614 PF13361 UvrD-like helicase C-terminal domain AB987_0615 PF00691 OmpA family AB987_0615 PF13488 Glycine zipper AB987_0616 PF01553 Acyltransferase AB987_0618 PF03775 Septum formation inhibitor MinC, C-terminal domain AB987_0619 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AB987_0620 PF03776 Septum formation topological specificity factor MinE AB987_0622 PF01810 LysE type translocator AB987_0623 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AB987_0623 PF09397 Ftsk gamma domain AB987_0623 PF01580 FtsK/SpoIIIE family AB987_0623 PF17854 FtsK alpha domain AB987_0624 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AB987_0626 PF04377 Arginine-tRNA-protein transferase, C terminus AB987_0626 PF04376 Arginine-tRNA-protein transferase, N terminus AB987_0627 PF00583 Acetyltransferase (GNAT) family AB987_0629 PF13737 Transposase DDE domain AB987_0631 PF03144 Elongation factor Tu domain 2 AB987_0631 PF00009 Elongation factor Tu GTP binding domain AB987_0631 PF03143 Elongation factor Tu C-terminal domain AB987_0632 PF03764 Elongation factor G, domain IV AB987_0632 PF00009 Elongation factor Tu GTP binding domain AB987_0632 PF03144 Elongation factor Tu domain 2 AB987_0632 PF00679 Elongation factor G C-terminus AB987_0632 PF14492 Elongation Factor G, domain II AB987_0633 PF00177 Ribosomal protein S7p/S5e AB987_0634 PF00164 Ribosomal protein S12/S23 AB987_0636 PF02801 Beta-ketoacyl synthase, C-terminal domain AB987_0636 PF00109 Beta-ketoacyl synthase, N-terminal domain AB987_0638 PF05726 Pirin C-terminal cupin domain AB987_0638 PF02678 Pirin AB987_0640 PF00795 Carbon-nitrogen hydrolase AB987_0640 PF02540 NAD synthase AB987_0643 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_0643 PF00175 Oxidoreductase NAD-binding domain AB987_0643 PF00970 Oxidoreductase FAD-binding domain AB987_0644 PF00171 Aldehyde dehydrogenase family AB987_0645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB987_0645 PF00355 Rieske [2Fe-2S] domain AB987_0646 PF07859 alpha/beta hydrolase fold AB987_0647 PF02028 BCCT, betaine/carnitine/choline family transporter AB987_0648 PF00180 Isocitrate/isopropylmalate dehydrogenase AB987_0649 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0649 PF03466 LysR substrate binding domain AB987_0652 PF00037 4Fe-4S binding domain AB987_0653 PF01467 Cytidylyltransferase-like AB987_0654 PF01668 SmpB protein AB987_0655 PF03358 NADPH-dependent FMN reductase AB987_0657 PF01479 S4 domain AB987_0657 PF00849 RNA pseudouridylate synthase AB987_0658 PF13525 Outer membrane lipoprotein AB987_0659 PF08275 DNA primase catalytic core, N-terminal domain AB987_0659 PF01807 CHC2 zinc finger AB987_0659 PF08278 DNA primase DnaG DnaB-binding AB987_0659 PF10410 DnaB-helicase binding domain of primase AB987_0660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AB987_0660 PF01488 Shikimate / quinate 5-dehydrogenase AB987_0660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AB987_0662 PF03550 Outer membrane lipoprotein LolB AB987_0663 PF00288 GHMP kinases N terminal domain AB987_0663 PF08544 GHMP kinases C terminal AB987_0668 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB987_0668 PF14572 Phosphoribosyl synthetase-associated domain AB987_0669 PF01386 Ribosomal L25p family AB987_0670 PF01195 Peptidyl-tRNA hydrolase AB987_0671 PF02261 Aspartate decarboxylase AB987_0674 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB987_0676 PF03070 TENA/THI-4/PQQC family AB987_0676 PF08543 Phosphomethylpyrimidine kinase AB987_0676 PF02581 Thiamine monophosphate synthase AB987_0677 PF04972 BON domain AB987_0677 PF01476 LysM domain AB987_0678 PF00550 Phosphopantetheine attachment site AB987_0680 PF00698 Acyl transferase domain AB987_0681 PF01783 Ribosomal L32p protein family AB987_0682 PF02620 Large ribosomal RNA subunit accumulation protein YceD AB987_0683 PF04315 Elongation factor P hydroxylase AB987_0684 PF01300 Telomere recombination AB987_0685 PF02616 Segregation and condensation protein ScpA AB987_0686 PF04079 Segregation and condensation complex subunit ScpB AB987_0687 PF00849 RNA pseudouridylate synthase AB987_0687 PF01479 S4 domain AB987_0690 PF00155 Aminotransferase class I and II AB987_0691 PF04055 Radical SAM superfamily AB987_0691 PF06968 Biotin and Thiamin Synthesis associated domain AB987_0691 PF00202 Aminotransferase class-III AB987_0692 PF08241 Methyltransferase domain AB987_0692 PF12697 Alpha/beta hydrolase family AB987_0693 PF02358 Trehalose-phosphatase AB987_0694 PF00982 Glycosyltransferase family 20 AB987_0695 PF07690 Major Facilitator Superfamily AB987_0696 PF00210 Ferritin-like domain AB987_0697 PF00533 BRCA1 C Terminus (BRCT) domain AB987_0697 PF01653 NAD-dependent DNA ligase adenylation domain AB987_0697 PF03120 NAD-dependent DNA ligase OB-fold domain AB987_0697 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AB987_0697 PF12826 Helix-hairpin-helix motif AB987_0699 PF06470 SMC proteins Flexible Hinge Domain AB987_0699 PF02463 RecF/RecN/SMC N terminal domain AB987_0701 PF01925 Sulfite exporter TauE/SafE AB987_0703 PF03309 Type III pantothenate kinase AB987_0704 PF02881 SRP54-type protein, helical bundle domain AB987_0704 PF00448 SRP54-type protein, GTPase domain AB987_0704 PF02978 Signal peptide binding domain AB987_0706 PF01207 Dihydrouridine synthase (Dus) AB987_0713 PF00692 dUTPase AB987_0716 PF01048 Phosphorylase superfamily AB987_0717 PF10609 NUBPL iron-transfer P-loop NTPase AB987_0719 PF09334 tRNA synthetases class I (M) AB987_0719 PF01588 Putative tRNA binding domain AB987_0724 PF13533 Biotin-lipoyl like AB987_0725 PF00291 Pyridoxal-phosphate dependent enzyme AB987_0728 PF05552 Conserved TM helix AB987_0731 PF00175 Oxidoreductase NAD-binding domain AB987_0731 PF00970 Oxidoreductase FAD-binding domain AB987_0732 PF03466 LysR substrate binding domain AB987_0732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0734 PF00313 'Cold-shock' DNA-binding domain AB987_0736 PF00361 Proton-conducting membrane transporter AB987_0737 PF00361 Proton-conducting membrane transporter AB987_0738 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB987_0738 PF00361 Proton-conducting membrane transporter AB987_0739 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB987_0740 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AB987_0741 PF12838 4Fe-4S dicluster domain AB987_0742 PF00146 NADH dehydrogenase AB987_0743 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB987_0743 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB987_0743 PF00384 Molybdopterin oxidoreductase AB987_0744 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AB987_0744 PF10531 SLBB domain AB987_0744 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB987_0746 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AB987_0746 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AB987_0747 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AB987_0748 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AB987_0749 PF00990 Diguanylate cyclase, GGDEF domain AB987_0749 PF17151 Periplasmic sensor domain AB987_0751 PF00512 His Kinase A (phospho-acceptor) domain AB987_0751 PF00672 HAMP domain AB987_0751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_0752 PF00072 Response regulator receiver domain AB987_0752 PF00486 Transcriptional regulatory protein, C terminal AB987_0753 PF03477 ATP cone domain AB987_0753 PF02867 Ribonucleotide reductase, barrel domain AB987_0753 PF00317 Ribonucleotide reductase, all-alpha domain AB987_0755 PF00268 Ribonucleotide reductase, small chain AB987_0757 PF01613 Flavin reductase like domain AB987_0758 PF01717 Cobalamin-independent synthase, Catalytic domain AB987_0758 PF08267 Cobalamin-independent synthase, N-terminal domain AB987_0760 PF03466 LysR substrate binding domain AB987_0760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0761 PF01810 LysE type translocator AB987_0762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0762 PF03466 LysR substrate binding domain AB987_0763 PF07690 Major Facilitator Superfamily AB987_0765 PF03466 LysR substrate binding domain AB987_0765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0767 PF00890 FAD binding domain AB987_0767 PF14537 Cytochrome c3 AB987_0769 PF08240 Alcohol dehydrogenase GroES-like domain AB987_0769 PF00107 Zinc-binding dehydrogenase AB987_0770 PF00962 Adenosine/AMP deaminase AB987_0775 PF02445 Quinolinate synthetase A protein AB987_0776 PF01960 ArgJ family AB987_0777 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB987_0777 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB987_0778 PF00893 Small Multidrug Resistance protein AB987_0780 PF05275 Copper resistance protein B precursor (CopB) AB987_0781 PF07731 Multicopper oxidase AB987_0781 PF07732 Multicopper oxidase AB987_0781 PF00394 Multicopper oxidase AB987_0784 PF00834 Ribulose-phosphate 3 epimerase family AB987_0786 PF00756 Putative esterase AB987_0788 PF04445 Putative SAM-dependent methyltransferase AB987_0789 PF00814 Glycoprotease family AB987_0790 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_0791 PF00293 NUDIX domain AB987_0794 PF13737 Transposase DDE domain AB987_0795 PF13737 Transposase DDE domain AB987_0796 PF00425 chorismate binding enzyme AB987_0796 PF04715 Anthranilate synthase component I, N terminal region AB987_0797 PF00155 Aminotransferase class I and II AB987_0798 PF00815 Histidinol dehydrogenase AB987_0799 PF01634 ATP phosphoribosyltransferase AB987_0800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB987_0801 PF01722 BolA-like protein AB987_0802 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB987_0803 PF04552 Sigma-54, DNA binding domain AB987_0803 PF00309 Sigma-54 factor, Activator interacting domain (AID) AB987_0803 PF04963 Sigma-54 factor, core binding domain AB987_0814 PF00795 Carbon-nitrogen hydrolase AB987_0816 PF01047 MarR family AB987_0817 PF02566 OsmC-like protein AB987_0818 PF00437 Type II/IV secretion system protein AB987_0822 PF00476 DNA polymerase family A AB987_0822 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB987_0822 PF01367 5'-3' exonuclease, C-terminal SAM fold AB987_0822 PF01612 3'-5' exonuclease AB987_0823 PF02325 YGGT family AB987_0824 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB987_0824 PF03807 NADP oxidoreductase coenzyme F420-dependent AB987_0825 PF01171 PP-loop family AB987_0825 PF09179 TilS substrate binding domain AB987_0825 PF11734 TilS substrate C-terminal domain AB987_0826 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AB987_0827 PF02541 Ppx/GppA phosphatase family AB987_0828 PF00085 Thioredoxin AB987_0829 PF07498 Rho termination factor, N-terminal domain AB987_0829 PF07497 Rho termination factor, RNA-binding domain AB987_0829 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB987_0831 PF00216 Bacterial DNA-binding protein AB987_0832 PF03147 Ferredoxin-fold anticodon binding domain AB987_0832 PF03483 B3/4 domain AB987_0832 PF01588 Putative tRNA binding domain AB987_0832 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AB987_0832 PF03484 tRNA synthetase B5 domain AB987_0833 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AB987_0833 PF01409 tRNA synthetases class II core domain (F) AB987_0837 PF00453 Ribosomal protein L20 AB987_0838 PF01632 Ribosomal protein L35 AB987_0839 PF07690 Major Facilitator Superfamily AB987_0840 PF09335 SNARE associated Golgi protein AB987_0841 PF00043 Glutathione S-transferase, C-terminal domain AB987_0841 PF02798 Glutathione S-transferase, N-terminal domain AB987_0842 PF00707 Translation initiation factor IF-3, C-terminal domain AB987_0842 PF05198 Translation initiation factor IF-3, N-terminal domain AB987_0843 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB987_0843 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB987_0843 PF02824 TGS domain AB987_0843 PF03129 Anticodon binding domain AB987_0844 PF13193 AMP-binding enzyme C-terminal domain AB987_0844 PF00501 AMP-binding enzyme AB987_0845 PF04751 Protein of unknown function (DUF615) AB987_0846 PF00381 PTS HPr component phosphorylation site AB987_0847 PF03668 P-loop ATPase protein family AB987_0848 PF02569 Pantoate-beta-alanine ligase AB987_0849 PF02548 Ketopantoate hydroxymethyltransferase AB987_0850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AB987_0851 PF12626 Polymerase A arginine-rich C-terminus AB987_0851 PF01743 Poly A polymerase head domain AB987_0851 PF12627 Probable RNA and SrmB- binding site of polymerase A AB987_0853 PF03819 MazG nucleotide pyrophosphohydrolase domain AB987_0855 PF13291 ACT domain AB987_0855 PF04607 Region found in RelA / SpoT proteins AB987_0855 PF02824 TGS domain AB987_0856 PF05958 tRNA (Uracil-5-)-methyltransferase AB987_0858 PF00291 Pyridoxal-phosphate dependent enzyme AB987_0859 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AB987_0859 PF00072 Response regulator receiver domain AB987_0859 PF01627 Hpt domain AB987_0859 PF00672 HAMP domain AB987_0859 PF00512 His Kinase A (phospho-acceptor) domain AB987_0859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_0860 PF00378 Enoyl-CoA hydratase/isomerase AB987_0861 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB987_0861 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB987_0862 PF01261 Xylose isomerase-like TIM barrel AB987_0864 PF00106 short chain dehydrogenase AB987_0866 PF02233 NAD(P) transhydrogenase beta subunit AB987_0867 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AB987_0868 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB987_0868 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AB987_0869 PF00892 EamA-like transporter family AB987_0871 PF07690 Major Facilitator Superfamily AB987_0877 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_0878 PF03358 NADPH-dependent FMN reductase AB987_0879 PF01758 Sodium Bile acid symporter family AB987_0881 PF01022 Bacterial regulatory protein, arsR family AB987_0882 PF03960 ArsC family AB987_0885 PF02421 Ferrous iron transport protein B AB987_0885 PF07664 Ferrous iron transport protein B C terminus AB987_0885 PF07670 Nucleoside recognition AB987_0887 PF00873 AcrB/AcrD/AcrF family AB987_0888 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_0892 PF07732 Multicopper oxidase AB987_0892 PF07731 Multicopper oxidase AB987_0892 PF00394 Multicopper oxidase AB987_0894 PF00486 Transcriptional regulatory protein, C terminal AB987_0894 PF00072 Response regulator receiver domain AB987_0895 PF00512 His Kinase A (phospho-acceptor) domain AB987_0895 PF00672 HAMP domain AB987_0895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_0896 PF04945 YHS domain AB987_0907 PF13276 HTH-like domain AB987_0907 PF13333 Integrase core domain AB987_0907 PF00665 Integrase core domain AB987_0912 PF00589 Phage integrase family AB987_0913 PF01207 Dihydrouridine synthase (Dus) AB987_0915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_0915 PF03466 LysR substrate binding domain AB987_0917 PF00899 ThiF family AB987_0918 PF00694 Aconitase C-terminal domain AB987_0918 PF00330 Aconitase family (aconitate hydratase) AB987_0919 PF01026 TatD related DNase AB987_0922 PF03144 Elongation factor Tu domain 2 AB987_0922 PF16658 Class II release factor RF3, C-terminal domain AB987_0922 PF00009 Elongation factor Tu GTP binding domain AB987_0924 PF07728 AAA domain (dynein-related subfamily) AB987_0924 PF12102 Domain of unknown function (DUF3578) AB987_0927 PF13784 Fic/DOC family N-terminal AB987_0927 PF02661 Fic/DOC family AB987_0935 PF00691 OmpA family AB987_0935 PF01389 OmpA-like transmembrane domain AB987_0943 PF01527 Transposase AB987_0944 PF13276 HTH-like domain AB987_0944 PF13333 Integrase core domain AB987_0944 PF00665 Integrase core domain AB987_0945 PF13737 Transposase DDE domain AB987_0946 PF03707 Bacterial signalling protein N terminal repeat AB987_0946 PF00990 Diguanylate cyclase, GGDEF domain AB987_0946 PF00563 EAL domain AB987_0947 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AB987_0947 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AB987_0948 PF10369 Small subunit of acetolactate synthase AB987_0949 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB987_0949 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB987_0949 PF00205 Thiamine pyrophosphate enzyme, central domain AB987_0951 PF00133 tRNA synthetases class I (I, L, M and V) AB987_0951 PF08264 Anticodon-binding domain of tRNA AB987_0951 PF09334 tRNA synthetases class I (M) AB987_0951 PF13603 Leucyl-tRNA synthetase, Domain 2 AB987_0954 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_0955 PF12704 MacB-like periplasmic core domain AB987_0955 PF00005 ABC transporter AB987_0955 PF02687 FtsX-like permease family AB987_0956 PF02321 Outer membrane efflux protein AB987_0959 PF00929 Exonuclease AB987_0960 PF03193 RsgA GTPase AB987_0962 PF00462 Glutaredoxin AB987_0963 PF02556 Preprotein translocase subunit SecB AB987_0965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB987_0965 PF01926 50S ribosome-binding GTPase AB987_0966 PF13360 PQQ-like domain AB987_0968 PF03129 Anticodon binding domain AB987_0968 PF13393 Histidyl-tRNA synthetase AB987_0969 PF04551 GcpE protein AB987_0970 PF13464 Domain of unknown function (DUF4115) AB987_0972 PF04055 Radical SAM superfamily AB987_0973 PF00334 Nucleoside diphosphate kinase AB987_0974 PF04384 Iron-sulphur cluster assembly AB987_0975 PF01569 PAP2 superfamily AB987_0976 PF13439 Glycosyltransferase Family 4 AB987_0976 PF00534 Glycosyl transferases group 1 AB987_0977 PF03572 Peptidase family S41 AB987_0977 PF17804 Tail specific protease N-terminal domain AB987_0977 PF11818 C-terminal domain of tail specific protease (DUF3340) AB987_0977 PF00595 PDZ domain AB987_0978 PF00933 Glycosyl hydrolase family 3 N terminal domain AB987_0980 PF12697 Alpha/beta hydrolase family AB987_0982 PF00171 Aldehyde dehydrogenase family AB987_0983 PF00171 Aldehyde dehydrogenase family AB987_0984 PF01202 Shikimate kinase AB987_0985 PF02447 GntP family permease AB987_0986 PF01081 KDPG and KHG aldolase AB987_0987 PF00920 Dehydratase family AB987_0988 PF00871 Acetokinase family AB987_0989 PF07085 DRTGG domain AB987_0989 PF01515 Phosphate acetyl/butaryl transferase AB987_0990 PF05683 Fumarase C-terminus AB987_0990 PF05681 Fumarate hydratase (Fumerase) AB987_0993 PF06689 ClpX C4-type zinc finger AB987_0993 PF10431 C-terminal, D2-small domain, of ClpB protein AB987_0993 PF07724 AAA domain (Cdc48 subfamily) AB987_0994 PF00574 Clp protease AB987_0995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_0995 PF05698 Bacterial trigger factor protein (TF) C-terminus AB987_0995 PF05697 Bacterial trigger factor protein (TF) AB987_0996 PF00593 TonB dependent receptor AB987_0996 PF07715 TonB-dependent Receptor Plug Domain AB987_0997 PF13640 2OG-Fe(II) oxygenase superfamily AB987_0997 PF18331 PKHD-type hydroxylase C-terminal domain AB987_0998 PF00682 HMGL-like AB987_0998 PF08502 LeuA allosteric (dimerisation) domain AB987_0999 PF00561 alpha/beta hydrolase fold AB987_1000 PF07021 Methionine biosynthesis protein MetW AB987_1000 PF00561 alpha/beta hydrolase fold AB987_1002 PF01725 Ham1 family AB987_1004 PF02416 mttA/Hcf106 family AB987_1005 PF02416 mttA/Hcf106 family AB987_1006 PF00902 Sec-independent protein translocase protein (TatC) AB987_1010 PF01790 Prolipoprotein diacylglyceryl transferase AB987_1013 PF00303 Thymidylate synthase AB987_1014 PF00186 Dihydrofolate reductase AB987_1016 PF01625 Peptide methionine sulfoxide reductase AB987_1018 PF01618 MotA/TolQ/ExbB proton channel family AB987_1020 PF01842 ACT domain AB987_1020 PF00551 Formyl transferase AB987_1022 PF00171 Aldehyde dehydrogenase family AB987_1023 PF00830 Ribosomal L28 family AB987_1024 PF00471 Ribosomal protein L33 AB987_1025 PF00999 Sodium/hydrogen exchanger family AB987_1025 PF02254 TrkA-N domain AB987_1029 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AB987_1030 PF13361 UvrD-like helicase C-terminal domain AB987_1030 PF00580 UvrD/REP helicase N-terminal domain AB987_1033 PF01396 Topoisomerase DNA binding C4 zinc finger AB987_1033 PF08272 Topoisomerase I zinc-ribbon-like AB987_1033 PF01751 Toprim domain AB987_1033 PF01131 DNA topoisomerase AB987_1035 PF01638 HxlR-like helix-turn-helix AB987_1036 PF00107 Zinc-binding dehydrogenase AB987_1036 PF08240 Alcohol dehydrogenase GroES-like domain AB987_1040 PF01810 LysE type translocator AB987_1041 PF03279 Bacterial lipid A biosynthesis acyltransferase AB987_1043 PF00375 Sodium:dicarboxylate symporter family AB987_1045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB987_1045 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB987_1049 PF01416 tRNA pseudouridine synthase AB987_1051 PF01176 Translation initiation factor 1A / IF-1 AB987_1054 PF00180 Isocitrate/isopropylmalate dehydrogenase AB987_1056 PF00694 Aconitase C-terminal domain AB987_1057 PF00330 Aconitase family (aconitate hydratase) AB987_1059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1059 PF03466 LysR substrate binding domain AB987_1061 PF00293 NUDIX domain AB987_1062 PF02896 PEP-utilising enzyme, TIM barrel domain AB987_1062 PF00391 PEP-utilising enzyme, mobile domain AB987_1062 PF01590 GAF domain AB987_1062 PF05524 PEP-utilising enzyme, N-terminal AB987_1063 PF00141 Peroxidase AB987_1064 PF12706 Beta-lactamase superfamily domain AB987_1066 PF13737 Transposase DDE domain AB987_1067 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1067 PF03466 LysR substrate binding domain AB987_1069 PF02798 Glutathione S-transferase, N-terminal domain AB987_1070 PF13280 WYL domain AB987_1070 PF08279 HTH domain AB987_1071 PF13419 Haloacid dehalogenase-like hydrolase AB987_1072 PF00849 RNA pseudouridylate synthase AB987_1072 PF01479 S4 domain AB987_1074 PF12111 Polyribonucleotide phosphorylase C terminal AB987_1074 PF00575 S1 RNA binding domain AB987_1074 PF10150 Ribonuclease E/G family AB987_1075 PF00501 AMP-binding enzyme AB987_1075 PF13193 AMP-binding enzyme C-terminal domain AB987_1078 PF03466 LysR substrate binding domain AB987_1078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1079 PF00106 short chain dehydrogenase AB987_1080 PF06969 HemN C-terminal domain AB987_1080 PF04055 Radical SAM superfamily AB987_1082 PF01554 MatE AB987_1083 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_1083 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_1083 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_1084 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_1084 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_1085 PF03109 ABC1 family AB987_1086 PF01197 Ribosomal protein L31 AB987_1099 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AB987_1103 PF03884 DNA gyrase inhibitor YacG AB987_1104 PF00753 Metallo-beta-lactamase superfamily AB987_1105 PF00762 Ferrochelatase AB987_1107 PF01177 Asp/Glu/Hydantoin racemase AB987_1111 PF01206 Sulfurtransferase TusA AB987_1112 PF00571 CBS domain AB987_1112 PF03471 Transporter associated domain AB987_1113 PF00795 Carbon-nitrogen hydrolase AB987_1114 PF01588 Putative tRNA binding domain AB987_1116 PF08334 Type II secretion system (T2SS), protein G AB987_1116 PF07963 Prokaryotic N-terminal methylation motif AB987_1117 PF00482 Type II secretion system (T2SS), protein F AB987_1118 PF00271 Helicase conserved C-terminal domain AB987_1118 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AB987_1118 PF17764 3′ DNA-binding domain (3′BD) AB987_1118 PF00270 DEAD/DEAH box helicase AB987_1118 PF18074 Primosomal protein N C-terminal domain AB987_1119 PF00999 Sodium/hydrogen exchanger family AB987_1119 PF02254 TrkA-N domain AB987_1120 PF01430 Hsp33 protein AB987_1122 PF01556 DnaJ C terminal domain AB987_1122 PF00226 DnaJ domain AB987_1124 PF01544 CorA-like Mg2+ transporter protein AB987_1125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AB987_1125 PF00575 S1 RNA binding domain AB987_1125 PF01138 3' exoribonuclease family, domain 1 AB987_1125 PF03725 3' exoribonuclease family, domain 2 AB987_1125 PF00013 KH domain AB987_1126 PF00312 Ribosomal protein S15 AB987_1128 PF13538 UvrD-like helicase C-terminal domain AB987_1129 PF12705 PD-(D/E)XK nuclease superfamily AB987_1129 PF13361 UvrD-like helicase C-terminal domain AB987_1129 PF00580 UvrD/REP helicase N-terminal domain AB987_1130 PF17946 RecC C-terminal domain AB987_1132 PF03976 Polyphosphate kinase 2 (PPK2) AB987_1134 PF01209 ubiE/COQ5 methyltransferase family AB987_1136 PF03109 ABC1 family AB987_1137 PF01494 FAD binding domain AB987_1138 PF01502 Phosphoribosyl-AMP cyclohydrolase AB987_1142 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB987_1142 PF00361 Proton-conducting membrane transporter AB987_1142 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AB987_1142 PF13244 Domain of unknown function (DUF4040) AB987_1143 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB987_1144 PF00361 Proton-conducting membrane transporter AB987_1146 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AB987_1148 PF02033 Ribosome-binding factor A AB987_1149 PF04760 Translation initiation factor IF-2, N-terminal region AB987_1149 PF11987 Translation-initiation factor 2 AB987_1149 PF08364 Bacterial translation initiation factor IF-2 associated region AB987_1149 PF00009 Elongation factor Tu GTP binding domain AB987_1150 PF00575 S1 RNA binding domain AB987_1150 PF08529 NusA N-terminal domain AB987_1150 PF13184 NusA-like KH domain AB987_1151 PF02576 RimP N-terminal domain AB987_1151 PF17384 RimP C-terminal SH3 domain AB987_1155 PF03840 Preprotein translocase SecG subunit AB987_1156 PF00121 Triosephosphate isomerase AB987_1157 PF00437 Type II/IV secretion system protein AB987_1157 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AB987_1158 PF00482 Type II secretion system (T2SS), protein F AB987_1159 PF06750 Bacterial Peptidase A24 N-terminal domain AB987_1159 PF01478 Type IV leader peptidase family AB987_1160 PF01121 Dephospho-CoA kinase AB987_1162 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB987_1162 PF00588 SpoU rRNA Methylase family AB987_1163 PF06865 Pyrimidine/purine nucleoside phosphorylase AB987_1165 PF02463 RecF/RecN/SMC N terminal domain AB987_1166 PF02622 Uncharacterized ACR, COG1678 AB987_1167 PF03652 Holliday junction resolvase AB987_1168 PF13533 Biotin-lipoyl like AB987_1173 PF12833 Helix-turn-helix domain AB987_1173 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB987_1173 PF02805 Metal binding domain of Ada AB987_1173 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB987_1174 PF01066 CDP-alcohol phosphatidyltransferase AB987_1176 PF08459 UvrC Helix-hairpin-helix N-terminal AB987_1176 PF02151 UvrB/uvrC motif AB987_1176 PF01541 GIY-YIG catalytic domain AB987_1180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB987_1180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB987_1180 PF00378 Enoyl-CoA hydratase/isomerase AB987_1181 PF00108 Thiolase, N-terminal domain AB987_1181 PF02803 Thiolase, C-terminal domain AB987_1184 PF13737 Transposase DDE domain AB987_1187 PF00376 MerR family regulatory protein AB987_1187 PF09278 MerR, DNA binding AB987_1189 PF01323 DSBA-like thioredoxin domain AB987_1192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1192 PF00183 Hsp90 protein AB987_1196 PF13726 Na+-H+ antiporter family AB987_1196 PF03553 Na+/H+ antiporter family AB987_1198 PF00561 alpha/beta hydrolase fold AB987_1203 PF04998 RNA polymerase Rpb1, domain 5 AB987_1203 PF04983 RNA polymerase Rpb1, domain 3 AB987_1203 PF05000 RNA polymerase Rpb1, domain 4 AB987_1203 PF04997 RNA polymerase Rpb1, domain 1 AB987_1203 PF00623 RNA polymerase Rpb1, domain 2 AB987_1204 PF04565 RNA polymerase Rpb2, domain 3 AB987_1204 PF04560 RNA polymerase Rpb2, domain 7 AB987_1204 PF04561 RNA polymerase Rpb2, domain 2 AB987_1204 PF00562 RNA polymerase Rpb2, domain 6 AB987_1204 PF10385 RNA polymerase beta subunit external 1 domain AB987_1204 PF04563 RNA polymerase beta subunit AB987_1205 PF16320 Ribosomal protein L7/L12 dimerisation domain AB987_1205 PF00542 Ribosomal protein L7/L12 C-terminal domain AB987_1206 PF00466 Ribosomal protein L10 AB987_1207 PF00687 Ribosomal protein L1p/L10e family AB987_1208 PF03946 Ribosomal protein L11, N-terminal domain AB987_1208 PF00298 Ribosomal protein L11, RNA binding domain AB987_1209 PF02357 Transcription termination factor nusG AB987_1209 PF00467 KOW motif AB987_1210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AB987_1212 PF03143 Elongation factor Tu C-terminal domain AB987_1212 PF03144 Elongation factor Tu domain 2 AB987_1212 PF00009 Elongation factor Tu GTP binding domain AB987_1217 PF00425 chorismate binding enzyme AB987_1217 PF04715 Anthranilate synthase component I, N terminal region AB987_1218 PF13419 Haloacid dehalogenase-like hydrolase AB987_1219 PF00498 FHA domain AB987_1219 PF12401 Protein of unknown function (DUF2662) AB987_1220 PF00263 Bacterial type II and III secretion system protein AB987_1220 PF03958 Bacterial type II/III secretion system short domain AB987_1223 PF00816 H-NS histone family AB987_1229 PF03900 Porphobilinogen deaminase, C-terminal domain AB987_1229 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AB987_1230 PF00072 Response regulator receiver domain AB987_1230 PF04397 LytTr DNA-binding domain AB987_1231 PF07694 5TMR of 5TMR-LYT AB987_1231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1231 PF06580 Histidine kinase AB987_1232 PF00206 Lyase AB987_1232 PF14698 Argininosuccinate lyase C-terminal AB987_1233 PF04362 Bacterial Fe(2+) trafficking AB987_1234 PF01895 PhoU domain AB987_1235 PF02321 Outer membrane efflux protein AB987_1236 PF00892 EamA-like transporter family AB987_1239 PF13667 ThiC-associated domain AB987_1239 PF01964 Radical SAM ThiC family AB987_1240 PF00293 NUDIX domain AB987_1241 PF00149 Calcineurin-like phosphoesterase AB987_1242 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB987_1243 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB987_1244 PF01098 Cell cycle protein AB987_1245 PF02875 Mur ligase family, glutamate ligase domain AB987_1245 PF08245 Mur ligase middle domain AB987_1247 PF07670 Nucleoside recognition AB987_1247 PF07664 Ferrous iron transport protein B C terminus AB987_1247 PF02421 Ferrous iron transport protein B AB987_1249 PF00589 Phage integrase family AB987_1249 PF02899 Phage integrase, N-terminal SAM-like domain AB987_1250 PF13098 Thioredoxin-like domain AB987_1250 PF10411 Disulfide bond isomerase protein N-terminus AB987_1251 PF03447 Homoserine dehydrogenase, NAD binding domain AB987_1251 PF00742 Homoserine dehydrogenase AB987_1251 PF01842 ACT domain AB987_1252 PF00291 Pyridoxal-phosphate dependent enzyme AB987_1253 PF00768 D-alanyl-D-alanine carboxypeptidase AB987_1254 PF00072 Response regulator receiver domain AB987_1254 PF00196 Bacterial regulatory proteins, luxR family AB987_1255 PF00512 His Kinase A (phospho-acceptor) domain AB987_1255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1256 PF02954 Bacterial regulatory protein, Fis family AB987_1256 PF00072 Response regulator receiver domain AB987_1256 PF00158 Sigma-54 interaction domain AB987_1257 PF00595 PDZ domain AB987_1257 PF03572 Peptidase family S41 AB987_1258 PF01676 Metalloenzyme superfamily AB987_1258 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AB987_1259 PF03739 Lipopolysaccharide export system permease LptF/LptG AB987_1261 PF02789 Cytosol aminopeptidase family, N-terminal domain AB987_1261 PF00883 Cytosol aminopeptidase family, catalytic domain AB987_1265 PF00677 Lumazine binding domain AB987_1267 PF01872 RibD C-terminal domain AB987_1267 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB987_1268 PF03477 ATP cone domain AB987_1269 PF00909 Ammonium Transporter Family AB987_1270 PF00543 Nitrogen regulatory protein P-II AB987_1272 PF01078 Magnesium chelatase, subunit ChlI AB987_1272 PF13335 Magnesium chelatase, subunit ChlI C-terminal AB987_1273 PF00392 Bacterial regulatory proteins, gntR family AB987_1273 PF00155 Aminotransferase class I and II AB987_1275 PF00701 Dihydrodipicolinate synthetase family AB987_1278 PF03573 outer membrane porin, OprD family AB987_1279 PF00719 Inorganic pyrophosphatase AB987_1282 PF00501 AMP-binding enzyme AB987_1282 PF13193 AMP-binding enzyme C-terminal domain AB987_1283 PF03989 DNA gyrase C-terminal domain, beta-propeller AB987_1283 PF00521 DNA gyrase/topoisomerase IV, subunit A AB987_1284 PF07690 Major Facilitator Superfamily AB987_1285 PF03458 UPF0126 domain AB987_1286 PF02810 SEC-C motif AB987_1287 PF03741 Integral membrane protein TerC family AB987_1287 PF03471 Transporter associated domain AB987_1289 PF03641 Possible lysine decarboxylase AB987_1290 PF07690 Major Facilitator Superfamily AB987_1292 PF11799 impB/mucB/samB family C-terminal domain AB987_1292 PF11798 IMS family HHH motif AB987_1292 PF00817 impB/mucB/samB family AB987_1293 PF00486 Transcriptional regulatory protein, C terminal AB987_1293 PF00072 Response regulator receiver domain AB987_1294 PF00512 His Kinase A (phospho-acceptor) domain AB987_1294 PF00672 HAMP domain AB987_1294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1295 PF06123 Inner membrane protein CreD AB987_1299 PF11842 Domain of unknown function (DUF3362) AB987_1299 PF04055 Radical SAM superfamily AB987_1299 PF08497 Radical SAM N-terminal AB987_1303 PF03358 NADPH-dependent FMN reductase AB987_1305 PF00291 Pyridoxal-phosphate dependent enzyme AB987_1320 PF01327 Polypeptide deformylase AB987_1322 PF17782 DprA winged helix domain AB987_1322 PF02481 DNA recombination-mediator protein A AB987_1323 PF01300 Telomere recombination AB987_1324 PF00892 EamA-like transporter family AB987_1325 PF00440 Bacterial regulatory proteins, tetR family AB987_1326 PF07690 Major Facilitator Superfamily AB987_1328 PF00255 Glutathione peroxidase AB987_1330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AB987_1331 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB987_1331 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB987_1332 PF00231 ATP synthase AB987_1333 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB987_1333 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB987_1333 PF00306 ATP synthase alpha/beta chain, C terminal domain AB987_1334 PF00213 ATP synthase delta (OSCP) subunit AB987_1335 PF00430 ATP synthase B/B' CF(0) AB987_1336 PF00137 ATP synthase subunit C AB987_1337 PF00119 ATP synthase A chain AB987_1341 PF00005 ABC transporter AB987_1342 PF00950 ABC 3 transport family AB987_1343 PF01810 LysE type translocator AB987_1344 PF04261 Dyp-type peroxidase family AB987_1345 PF03949 Malic enzyme, NAD binding domain AB987_1345 PF00390 Malic enzyme, N-terminal domain AB987_1346 PF00750 tRNA synthetases class I (R) AB987_1346 PF03485 Arginyl tRNA synthetase N terminal domain AB987_1346 PF05746 DALR anticodon binding domain AB987_1350 PF05726 Pirin C-terminal cupin domain AB987_1350 PF02678 Pirin AB987_1352 PF03551 Transcriptional regulator PadR-like family AB987_1353 PF01909 Nucleotidyltransferase domain AB987_1353 PF13427 Domain of unknown function (DUF4111) AB987_1354 PF00117 Glutamine amidotransferase class-I AB987_1354 PF02540 NAD synthase AB987_1354 PF00958 GMP synthase C terminal domain AB987_1355 PF04286 Protein of unknown function (DUF445) AB987_1356 PF07681 DoxX AB987_1357 PF09335 SNARE associated Golgi protein AB987_1363 PF13614 AAA domain AB987_1365 PF01722 BolA-like protein AB987_1368 PF01648 4'-phosphopantetheinyl transferase superfamily AB987_1369 PF12697 Alpha/beta hydrolase family AB987_1370 PF13737 Transposase DDE domain AB987_1371 PF00083 Sugar (and other) transporter AB987_1371 PF07690 Major Facilitator Superfamily AB987_1372 PF00378 Enoyl-CoA hydratase/isomerase AB987_1373 PF00378 Enoyl-CoA hydratase/isomerase AB987_1374 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_1374 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_1374 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_1375 PF00501 AMP-binding enzyme AB987_1375 PF13193 AMP-binding enzyme C-terminal domain AB987_1376 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB987_1376 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB987_1377 PF00171 Aldehyde dehydrogenase family AB987_1379 PF00324 Amino acid permease AB987_1380 PF01042 Endoribonuclease L-PSP AB987_1381 PF01168 Alanine racemase, N-terminal domain AB987_1381 PF00842 Alanine racemase, C-terminal domain AB987_1382 PF01266 FAD dependent oxidoreductase AB987_1383 PF01037 Lrp/AsnC ligand binding domain AB987_1385 PF07715 TonB-dependent Receptor Plug Domain AB987_1385 PF00593 TonB dependent receptor AB987_1388 PF00849 RNA pseudouridylate synthase AB987_1395 PF00330 Aconitase family (aconitate hydratase) AB987_1395 PF00694 Aconitase C-terminal domain AB987_1396 PF00285 Citrate synthase, C-terminal domain AB987_1398 PF00392 Bacterial regulatory proteins, gntR family AB987_1398 PF07729 FCD domain AB987_1399 PF00155 Aminotransferase class I and II AB987_1400 PF09330 D-lactate dehydrogenase, membrane binding AB987_1400 PF01565 FAD binding domain AB987_1401 PF01070 FMN-dependent dehydrogenase AB987_1402 PF07729 FCD domain AB987_1402 PF00392 Bacterial regulatory proteins, gntR family AB987_1403 PF02652 L-lactate permease AB987_1404 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB987_1404 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB987_1404 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB987_1404 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB987_1406 PF16363 GDP-mannose 4,6 dehydratase AB987_1407 PF00342 Phosphoglucose isomerase AB987_1408 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB987_1408 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB987_1408 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB987_1409 PF00483 Nucleotidyl transferase AB987_1410 PF14052 Capsule assembly protein Wzi AB987_1411 PF02397 Bacterial sugar transferase AB987_1415 PF00535 Glycosyl transferase family 2 AB987_1416 PF01943 Polysaccharide biosynthesis protein AB987_1417 PF00535 Glycosyl transferase family 2 AB987_1418 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AB987_1419 PF00483 Nucleotidyl transferase AB987_1420 PF04321 RmlD substrate binding domain AB987_1421 PF16363 GDP-mannose 4,6 dehydratase AB987_1422 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB987_1422 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB987_1422 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB987_1423 PF02563 Polysaccharide biosynthesis/export protein AB987_1423 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AB987_1423 PF10531 SLBB domain AB987_1424 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB987_1425 PF02706 Chain length determinant protein AB987_1425 PF13807 G-rich domain on putative tyrosine kinase AB987_1425 PF13614 AAA domain AB987_1426 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB987_1426 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_1427 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_1427 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB987_1428 PF03023 Lipid II flippase MurJ AB987_1429 PF01510 N-acetylmuramoyl-L-alanine amidase AB987_1430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AB987_1430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AB987_1432 PF05506 Domain of unknown function (DUF756) AB987_1432 PF04185 Phosphoesterase family AB987_1434 PF01138 3' exoribonuclease family, domain 1 AB987_1434 PF03725 3' exoribonuclease family, domain 2 AB987_1435 PF00487 Fatty acid desaturase AB987_1436 PF00175 Oxidoreductase NAD-binding domain AB987_1437 PF00440 Bacterial regulatory proteins, tetR family AB987_1438 PF00440 Bacterial regulatory proteins, tetR family AB987_1438 PF08360 QacR-like protein, C-terminal region AB987_1439 PF01323 DSBA-like thioredoxin domain AB987_1441 PF13419 Haloacid dehalogenase-like hydrolase AB987_1442 PF00106 short chain dehydrogenase AB987_1445 PF00583 Acetyltransferase (GNAT) family AB987_1445 PF00696 Amino acid kinase family AB987_1446 PF09084 NMT1/THI5 like AB987_1447 PF09084 NMT1/THI5 like AB987_1448 PF00296 Luciferase-like monooxygenase AB987_1449 PF00528 Binding-protein-dependent transport system inner membrane component AB987_1450 PF00005 ABC transporter AB987_1451 PF08362 YcdC-like protein, C-terminal region AB987_1451 PF00440 Bacterial regulatory proteins, tetR family AB987_1452 PF01048 Phosphorylase superfamily AB987_1454 PF06574 FAD synthetase AB987_1454 PF01687 Riboflavin kinase AB987_1455 PF08264 Anticodon-binding domain of tRNA AB987_1455 PF00133 tRNA synthetases class I (I, L, M and V) AB987_1455 PF06827 Zinc finger found in FPG and IleRS AB987_1456 PF01252 Signal peptidase (SPase) II AB987_1457 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_1467 PF00579 tRNA synthetases class I (W and Y) AB987_1468 PF03702 Anhydro-N-acetylmuramic acid kinase AB987_1469 PF00561 alpha/beta hydrolase fold AB987_1470 PF01521 Iron-sulphur cluster biosynthesis AB987_1474 PF12848 ABC transporter AB987_1474 PF00005 ABC transporter AB987_1475 PF09335 SNARE associated Golgi protein AB987_1477 PF01751 Toprim domain AB987_1477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1477 PF00986 DNA gyrase B subunit, carboxyl terminus AB987_1477 PF00204 DNA gyrase B AB987_1477 PF18053 DNA gyrase B subunit insert domain AB987_1478 PF02463 RecF/RecN/SMC N terminal domain AB987_1479 PF02767 DNA polymerase III beta subunit, central domain AB987_1479 PF00712 DNA polymerase III beta subunit, N-terminal domain AB987_1479 PF02768 DNA polymerase III beta subunit, C-terminal domain AB987_1480 PF08299 Bacterial dnaA protein helix-turn-helix AB987_1480 PF11638 DnaA N-terminal domain AB987_1480 PF00308 Bacterial dnaA protein AB987_1481 PF00468 Ribosomal protein L34 AB987_1482 PF00825 Ribonuclease P AB987_1483 PF01809 Putative membrane protein insertion efficiency factor AB987_1484 PF02096 60Kd inner membrane protein AB987_1484 PF14849 YidC periplasmic domain AB987_1485 PF10396 GTP-binding protein TrmE N-terminus AB987_1485 PF12631 MnmE helical domain AB987_1485 PF01926 50S ribosome-binding GTPase AB987_1486 PF02583 Metal-sensitive transcriptional repressor AB987_1487 PF16916 Dimerisation domain of Zinc Transporter AB987_1487 PF01545 Cation efflux family AB987_1488 PF10411 Disulfide bond isomerase protein N-terminus AB987_1488 PF13098 Thioredoxin-like domain AB987_1490 PF00156 Phosphoribosyl transferase domain AB987_1492 PF01979 Amidohydrolase family AB987_1493 PF00355 Rieske [2Fe-2S] domain AB987_1494 PF03738 Glutathionylspermidine synthase preATP-grasp AB987_1496 PF03741 Integral membrane protein TerC family AB987_1497 PF01569 PAP2 superfamily AB987_1500 PF01225 Mur ligase family, catalytic domain AB987_1500 PF02875 Mur ligase family, glutamate ligase domain AB987_1500 PF08245 Mur ligase middle domain AB987_1503 PF00731 AIR carboxylase AB987_1504 PF02222 ATP-grasp domain AB987_1504 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AB987_1505 PF13406 Transglycosylase SLT domain AB987_1509 PF00012 Hsp70 protein AB987_1510 PF01025 GrpE AB987_1511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1511 PF03466 LysR substrate binding domain AB987_1516 PF07859 alpha/beta hydrolase fold AB987_1517 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB987_1528 PF00209 Sodium:neurotransmitter symporter family AB987_1530 PF01029 NusB family AB987_1530 PF01189 16S rRNA methyltransferase RsmB/F AB987_1531 PF00551 Formyl transferase AB987_1531 PF02911 Formyl transferase, C-terminal domain AB987_1532 PF00920 Dehydratase family AB987_1535 PF03466 LysR substrate binding domain AB987_1535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1536 PF00860 Permease family AB987_1537 PF00311 Phosphoenolpyruvate carboxylase AB987_1538 PF00440 Bacterial regulatory proteins, tetR family AB987_1538 PF08361 MAATS-type transcriptional repressor, C-terminal region AB987_1539 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_1540 PF00873 AcrB/AcrD/AcrF family AB987_1542 PF00684 DnaJ central domain AB987_1542 PF01556 DnaJ C terminal domain AB987_1542 PF00226 DnaJ domain AB987_1544 PF01113 Dihydrodipicolinate reductase, N-terminus AB987_1544 PF05173 Dihydrodipicolinate reductase, C-terminus AB987_1546 PF07690 Major Facilitator Superfamily AB987_1547 PF00248 Aldo/keto reductase family AB987_1548 PF00248 Aldo/keto reductase family AB987_1549 PF03466 LysR substrate binding domain AB987_1549 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1551 PF00392 Bacterial regulatory proteins, gntR family AB987_1551 PF00155 Aminotransferase class I and II AB987_1552 PF00107 Zinc-binding dehydrogenase AB987_1552 PF08240 Alcohol dehydrogenase GroES-like domain AB987_1553 PF03352 Methyladenine glycosylase AB987_1556 PF00730 HhH-GPD superfamily base excision DNA repair protein AB987_1556 PF00633 Helix-hairpin-helix motif AB987_1556 PF10576 Iron-sulfur binding domain of endonuclease III AB987_1556 PF14815 NUDIX domain AB987_1559 PF07043 Protein of unknown function (DUF1328) AB987_1560 PF03692 Putative zinc- or iron-chelating domain AB987_1561 PF07995 Glucose / Sorbosone dehydrogenase AB987_1562 PF12002 MgsA AAA+ ATPase C terminal AB987_1562 PF00004 ATPase family associated with various cellular activities (AAA) AB987_1562 PF16193 AAA C-terminal domain AB987_1563 PF01226 Formate/nitrite transporter AB987_1565 PF01259 SAICAR synthetase AB987_1567 PF00701 Dihydrodipicolinate synthetase family AB987_1568 PF00857 Isochorismatase family AB987_1569 PF01758 Sodium Bile acid symporter family AB987_1572 PF04463 Protein of unknown function (DUF523) AB987_1573 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB987_1575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB987_1576 PF14497 Glutathione S-transferase, C-terminal domain AB987_1576 PF02798 Glutathione S-transferase, N-terminal domain AB987_1578 PF00324 Amino acid permease AB987_1580 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB987_1580 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB987_1582 PF13737 Transposase DDE domain AB987_1584 PF00392 Bacterial regulatory proteins, gntR family AB987_1584 PF07702 UTRA domain AB987_1585 PF05962 HutD AB987_1586 PF17392 Urocanase C-terminal domain AB987_1586 PF01175 Urocanase Rossmann-like domain AB987_1586 PF17391 Urocanase N-terminal domain AB987_1587 PF00221 Aromatic amino acid lyase AB987_1588 PF00324 Amino acid permease AB987_1589 PF01979 Amidohydrolase family AB987_1590 PF00491 Arginase family AB987_1594 PF02543 Carbamoyltransferase N-terminus AB987_1594 PF16861 Carbamoyltransferase C-terminus AB987_1595 PF00665 Integrase core domain AB987_1595 PF13936 Helix-turn-helix domain AB987_1596 PF00491 Arginase family AB987_1598 PF13419 Haloacid dehalogenase-like hydrolase AB987_1599 PF01177 Asp/Glu/Hydantoin racemase AB987_1600 PF01380 SIS domain AB987_1601 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_1601 PF12804 MobA-like NTP transferase domain AB987_1601 PF14602 Hexapeptide repeat of succinyl-transferase AB987_1602 PF04608 Phosphatidylglycerophosphatase A AB987_1604 PF02769 AIR synthase related protein, C-terminal domain AB987_1604 PF00586 AIR synthase related protein, N-terminal domain AB987_1605 PF01029 NusB family AB987_1606 PF00885 6,7-dimethyl-8-ribityllumazine synthase AB987_1607 PF00925 GTP cyclohydrolase II AB987_1607 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB987_1612 PF02580 D-Tyr-tRNA(Tyr) deacylase AB987_1613 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AB987_1613 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB987_1614 PF00581 Rhodanese-like domain AB987_1615 PF02666 Phosphatidylserine decarboxylase AB987_1617 PF00989 PAS fold AB987_1617 PF11808 Phosphate regulon sensor protein PhoR AB987_1617 PF00512 His Kinase A (phospho-acceptor) domain AB987_1617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1618 PF00072 Response regulator receiver domain AB987_1618 PF00486 Transcriptional regulatory protein, C terminal AB987_1620 PF00106 short chain dehydrogenase AB987_1621 PF01554 MatE AB987_1622 PF00155 Aminotransferase class I and II AB987_1623 PF04286 Protein of unknown function (DUF445) AB987_1626 PF04262 Glutamate-cysteine ligase AB987_1627 PF02600 Disulfide bond formation protein DsbB AB987_1628 PF13737 Transposase DDE domain AB987_1631 PF05728 Uncharacterised protein family (UPF0227) AB987_1632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1632 PF00986 DNA gyrase B subunit, carboxyl terminus AB987_1632 PF01751 Toprim domain AB987_1632 PF00204 DNA gyrase B AB987_1633 PF04115 Ureidoglycolate lyase AB987_1634 PF03561 Allantoicase repeat AB987_1635 PF01494 FAD binding domain AB987_1637 PF00860 Permease family AB987_1638 PF00576 HIUase/Transthyretin family AB987_1644 PF11412 Disulphide bond corrector protein DsbC AB987_1644 PF02683 Cytochrome C biogenesis protein transmembrane region AB987_1645 PF00990 Diguanylate cyclase, GGDEF domain AB987_1645 PF07694 5TMR of 5TMR-LYT AB987_1646 PF07859 alpha/beta hydrolase fold AB987_1648 PF03960 ArsC family AB987_1649 PF03372 Endonuclease/Exonuclease/phosphatase family AB987_1650 PF00156 Phosphoribosyl transferase domain AB987_1651 PF07660 Secretin and TonB N terminus short domain AB987_1651 PF07715 TonB-dependent Receptor Plug Domain AB987_1651 PF00593 TonB dependent receptor AB987_1652 PF07715 TonB-dependent Receptor Plug Domain AB987_1652 PF00593 TonB dependent receptor AB987_1654 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AB987_1654 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AB987_1655 PF04101 Glycosyltransferase family 28 C-terminal domain AB987_1655 PF03033 Glycosyltransferase family 28 N-terminal domain AB987_1656 PF08245 Mur ligase middle domain AB987_1656 PF02875 Mur ligase family, glutamate ligase domain AB987_1656 PF01225 Mur ligase family, catalytic domain AB987_1657 PF01820 D-ala D-ala ligase N-terminus AB987_1657 PF07478 D-ala D-ala ligase C-terminus AB987_1658 PF03799 Cell division protein FtsQ AB987_1658 PF08478 POTRA domain, FtsQ-type AB987_1659 PF02491 SHS2 domain inserted in FTSA AB987_1660 PF12327 FtsZ family, C-terminal domain AB987_1660 PF00091 Tubulin/FtsZ family, GTPase domain AB987_1661 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AB987_1663 PF01551 Peptidase family M23 AB987_1664 PF00456 Transketolase, thiamine diphosphate binding domain AB987_1664 PF17831 Pyruvate dehydrogenase E1 component middle domain AB987_1665 PF02817 e3 binding domain AB987_1665 PF00364 Biotin-requiring enzyme AB987_1665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB987_1667 PF01169 Uncharacterized protein family UPF0016 AB987_1668 PF00593 TonB dependent receptor AB987_1668 PF07715 TonB-dependent Receptor Plug Domain AB987_1669 PF00258 Flavodoxin AB987_1669 PF01613 Flavin reductase like domain AB987_1670 PF03692 Putative zinc- or iron-chelating domain AB987_1671 PF00478 IMP dehydrogenase / GMP reductase domain AB987_1671 PF00571 CBS domain AB987_1672 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB987_1672 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB987_1672 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB987_1672 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB987_1673 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AB987_1673 PF01243 Pyridoxamine 5'-phosphate oxidase AB987_1674 PF17768 RecJ OB domain AB987_1674 PF01368 DHH family AB987_1674 PF02272 DHHA1 domain AB987_1676 PF00472 RF-1 domain AB987_1676 PF03462 PCRF domain AB987_1678 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_1679 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AB987_1680 PF04452 RNA methyltransferase AB987_1681 PF00924 Mechanosensitive ion channel AB987_1684 PF00501 AMP-binding enzyme AB987_1684 PF13193 AMP-binding enzyme C-terminal domain AB987_1684 PF16177 Acetyl-coenzyme A synthetase N-terminus AB987_1685 PF00857 Isochorismatase family AB987_1686 PF01037 Lrp/AsnC ligand binding domain AB987_1688 PF00296 Luciferase-like monooxygenase AB987_1689 PF03358 NADPH-dependent FMN reductase AB987_1690 PF00072 Response regulator receiver domain AB987_1690 PF00196 Bacterial regulatory proteins, luxR family AB987_1692 PF01627 Hpt domain AB987_1692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1692 PF00672 HAMP domain AB987_1692 PF00512 His Kinase A (phospho-acceptor) domain AB987_1692 PF00072 Response regulator receiver domain AB987_1693 PF04341 Protein of unknown function, DUF485 AB987_1694 PF00474 Sodium:solute symporter family AB987_1696 PF02028 BCCT, betaine/carnitine/choline family transporter AB987_1698 PF00990 Diguanylate cyclase, GGDEF domain AB987_1698 PF08448 PAS fold AB987_1699 PF17760 UvrA interaction domain AB987_1699 PF17755 UvrA DNA-binding domain AB987_1700 PF00440 Bacterial regulatory proteins, tetR family AB987_1700 PF16925 Tetracyclin repressor-like, C-terminal domain AB987_1701 PF00107 Zinc-binding dehydrogenase AB987_1701 PF08240 Alcohol dehydrogenase GroES-like domain AB987_1703 PF06942 GlpM protein AB987_1704 PF08543 Phosphomethylpyrimidine kinase AB987_1704 PF03070 TENA/THI-4/PQQC family AB987_1704 PF02581 Thiamine monophosphate synthase AB987_1706 PF07690 Major Facilitator Superfamily AB987_1707 PF00436 Single-strand binding protein family AB987_1709 PF03591 AzlC protein AB987_1711 PF00324 Amino acid permease AB987_1712 PF00392 Bacterial regulatory proteins, gntR family AB987_1712 PF00155 Aminotransferase class I and II AB987_1713 PF00202 Aminotransferase class-III AB987_1714 PF00171 Aldehyde dehydrogenase family AB987_1715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1716 PF00857 Isochorismatase family AB987_1717 PF05726 Pirin C-terminal cupin domain AB987_1717 PF02678 Pirin AB987_1719 PF01593 Flavin containing amine oxidoreductase AB987_1722 PF02463 RecF/RecN/SMC N terminal domain AB987_1755 PF00176 SNF2 family N-terminal domain AB987_1755 PF00271 Helicase conserved C-terminal domain AB987_1758 PF01555 DNA methylase AB987_1762 PF00589 Phage integrase family AB987_1762 PF13356 Arm DNA-binding domain AB987_1764 PF02705 K+ potassium transporter AB987_1769 PF00230 Major intrinsic protein AB987_1770 PF13737 Transposase DDE domain AB987_1773 PF00977 Histidine biosynthesis protein AB987_1774 PF01636 Phosphotransferase enzyme family AB987_1777 PF03992 Antibiotic biosynthesis monooxygenase AB987_1782 PF00977 Histidine biosynthesis protein AB987_1785 PF00117 Glutamine amidotransferase class-I AB987_1786 PF00475 Imidazoleglycerol-phosphate dehydratase AB987_1790 PF00583 Acetyltransferase (GNAT) family AB987_1791 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AB987_1791 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AB987_1792 PF00672 HAMP domain AB987_1792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_1792 PF00512 His Kinase A (phospho-acceptor) domain AB987_1793 PF00072 Response regulator receiver domain AB987_1793 PF00486 Transcriptional regulatory protein, C terminal AB987_1794 PF09371 Tex-like protein N-terminal domain AB987_1794 PF00575 S1 RNA binding domain AB987_1794 PF17674 HHH domain AB987_1794 PF16921 Tex protein YqgF-like domain AB987_1795 PF01740 STAS domain AB987_1795 PF00916 Sulfate permease family AB987_1796 PF00106 short chain dehydrogenase AB987_1797 PF01053 Cys/Met metabolism PLP-dependent enzyme AB987_1798 PF00005 ABC transporter AB987_1798 PF12848 ABC transporter AB987_1806 PF00529 HlyD membrane-fusion protein of T1SS AB987_1806 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_1807 PF00873 AcrB/AcrD/AcrF family AB987_1808 PF01545 Cation efflux family AB987_1814 PF00324 Amino acid permease AB987_1817 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB987_1820 PF01795 MraW methylase family AB987_1822 PF03717 Penicillin-binding Protein dimerisation domain AB987_1822 PF00905 Penicillin binding protein transpeptidase domain AB987_1823 PF02875 Mur ligase family, glutamate ligase domain AB987_1823 PF08245 Mur ligase middle domain AB987_1823 PF01225 Mur ligase family, catalytic domain AB987_1824 PF08245 Mur ligase middle domain AB987_1824 PF02875 Mur ligase family, glutamate ligase domain AB987_1824 PF01225 Mur ligase family, catalytic domain AB987_1825 PF00953 Glycosyl transferase family 4 AB987_1827 PF13847 Methyltransferase domain AB987_1828 PF00905 Penicillin binding protein transpeptidase domain AB987_1828 PF17092 Penicillin-binding protein OB-like domain AB987_1828 PF00912 Transglycosylase AB987_1833 PF11741 AMIN domain AB987_1833 PF00263 Bacterial type II and III secretion system protein AB987_1833 PF03958 Bacterial type II/III secretion system short domain AB987_1833 PF07660 Secretin and TonB N terminus short domain AB987_1834 PF01202 Shikimate kinase AB987_1835 PF01761 3-dehydroquinate synthase AB987_1837 PF01645 Conserved region in glutamate synthase AB987_1837 PF00310 Glutamine amidotransferases class-II AB987_1837 PF01493 GXGXG motif AB987_1837 PF04898 Glutamate synthase central domain AB987_1838 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_1838 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AB987_1840 PF04011 LemA family AB987_1841 PF04536 TPM domain AB987_1843 PF07963 Prokaryotic N-terminal methylation motif AB987_1843 PF00114 Pilin (bacterial filament) AB987_1845 PF04932 O-Antigen ligase AB987_1845 PF15864 Protein glycosylation ligase AB987_1845 PF11846 Virulence factor membrane-bound polymerase, C-terminal AB987_1846 PF00210 Ferritin-like domain AB987_1847 PF04324 BFD-like [2Fe-2S] binding domain AB987_1848 PF01042 Endoribonuclease L-PSP AB987_1849 PF13291 ACT domain AB987_1849 PF02824 TGS domain AB987_1849 PF04607 Region found in RelA / SpoT proteins AB987_1850 PF01192 RNA polymerase Rpb6 AB987_1851 PF00625 Guanylate kinase AB987_1852 PF02401 LytB protein AB987_1860 PF00886 Ribosomal protein S16 AB987_1861 PF01782 RimM N-terminal domain AB987_1861 PF05239 PRC-barrel domain AB987_1862 PF01746 tRNA (Guanine-1)-methyltransferase AB987_1863 PF01245 Ribosomal protein L19 AB987_1864 PF00561 alpha/beta hydrolase fold AB987_1865 PF03280 Proteobacterial lipase chaperone protein AB987_1866 PF16198 tRNA pseudouridylate synthase B C-terminal domain AB987_1866 PF01509 TruB family pseudouridylate synthase (N terminal domain) AB987_1866 PF09157 Pseudouridine synthase II TruB, C-terminal AB987_1867 PF01925 Sulfite exporter TauE/SafE AB987_1869 PF00892 EamA-like transporter family AB987_1870 PF00892 EamA-like transporter family AB987_1871 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB987_1871 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB987_1872 PF02913 FAD linked oxidases, C-terminal domain AB987_1872 PF01565 FAD binding domain AB987_1874 PF03992 Antibiotic biosynthesis monooxygenase AB987_1875 PF02525 Flavodoxin-like fold AB987_1878 PF07690 Major Facilitator Superfamily AB987_1879 PF12805 FUSC-like inner membrane protein yccS AB987_1880 PF00080 Copper/zinc superoxide dismutase (SODC) AB987_1881 PF01594 AI-2E family transporter AB987_1886 PF08241 Methyltransferase domain AB987_1888 PF00324 Amino acid permease AB987_1890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB987_1890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB987_1891 PF00202 Aminotransferase class-III AB987_1892 PF04958 Arginine N-succinyltransferase beta subunit AB987_1893 PF00171 Aldehyde dehydrogenase family AB987_1894 PF04996 Succinylarginine dihydrolase AB987_1895 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AB987_1899 PF00082 Subtilase family AB987_1902 PF03466 LysR substrate binding domain AB987_1902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_1903 PF00892 EamA-like transporter family AB987_1906 PF02092 Glycyl-tRNA synthetase beta subunit AB987_1906 PF05746 DALR anticodon binding domain AB987_1907 PF02091 Glycyl-tRNA synthetase alpha subunit AB987_1908 PF07690 Major Facilitator Superfamily AB987_1911 PF00571 CBS domain AB987_1912 PF04024 PspC domain AB987_1914 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB987_1914 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_1914 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_1914 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_1916 PF01488 Shikimate / quinate 5-dehydrogenase AB987_1916 PF08501 Shikimate dehydrogenase substrate binding domain AB987_1916 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AB987_1917 PF01218 Coproporphyrinogen III oxidase AB987_1918 PF00925 GTP cyclohydrolase II AB987_1919 PF02779 Transketolase, pyrimidine binding domain AB987_1919 PF02780 Transketolase, C-terminal domain AB987_1919 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB987_1920 PF00459 Inositol monophosphatase family AB987_1921 PF00270 DEAD/DEAH box helicase AB987_1921 PF12343 Cold shock protein DEAD box A AB987_1921 PF00271 Helicase conserved C-terminal domain AB987_1921 PF03880 DbpA RNA binding domain AB987_1923 PF00005 ABC transporter AB987_1924 PF02405 Permease MlaE AB987_1926 PF05494 MlaC protein AB987_1929 PF01544 CorA-like Mg2+ transporter protein AB987_1930 PF03641 Possible lysine decarboxylase AB987_1931 PF00293 NUDIX domain AB987_1932 PF00156 Phosphoribosyl transferase domain AB987_1933 PF00270 DEAD/DEAH box helicase AB987_1933 PF17191 RecG wedge domain AB987_1933 PF00271 Helicase conserved C-terminal domain AB987_1936 PF01553 Acyltransferase AB987_1938 PF00375 Sodium:dicarboxylate symporter family AB987_1940 PF01926 50S ribosome-binding GTPase AB987_1941 PF02082 Transcriptional regulator AB987_1942 PF00042 Globin AB987_1942 PF00175 Oxidoreductase NAD-binding domain AB987_1942 PF00970 Oxidoreductase FAD-binding domain AB987_1943 PF05872 Bacterial protein of unknown function (DUF853) AB987_1944 PF01053 Cys/Met metabolism PLP-dependent enzyme AB987_1945 PF00117 Glutamine amidotransferase class-I AB987_1946 PF00338 Ribosomal protein S10p/S20e AB987_1947 PF00297 Ribosomal protein L3 AB987_1948 PF00573 Ribosomal protein L4/L1 family AB987_1949 PF00276 Ribosomal protein L23 AB987_1950 PF00181 Ribosomal Proteins L2, RNA binding domain AB987_1950 PF03947 Ribosomal Proteins L2, C-terminal domain AB987_1951 PF00203 Ribosomal protein S19 AB987_1952 PF00237 Ribosomal protein L22p/L17e AB987_1953 PF00189 Ribosomal protein S3, C-terminal domain AB987_1953 PF07650 KH domain AB987_1954 PF00252 Ribosomal protein L16p/L10e AB987_1955 PF00831 Ribosomal L29 protein AB987_1956 PF00366 Ribosomal protein S17 AB987_1957 PF00238 Ribosomal protein L14p/L23e AB987_1958 PF00467 KOW motif AB987_1958 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AB987_1959 PF00673 ribosomal L5P family C-terminus AB987_1959 PF00281 Ribosomal protein L5 AB987_1960 PF00253 Ribosomal protein S14p/S29e AB987_1961 PF00410 Ribosomal protein S8 AB987_1962 PF00347 Ribosomal protein L6 AB987_1963 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AB987_1964 PF03719 Ribosomal protein S5, C-terminal domain AB987_1964 PF00333 Ribosomal protein S5, N-terminal domain AB987_1965 PF00327 Ribosomal protein L30p/L7e AB987_1966 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AB987_1967 PF00344 SecY translocase AB987_1968 PF00444 Ribosomal protein L36 AB987_1969 PF00416 Ribosomal protein S13/S18 AB987_1970 PF00411 Ribosomal protein S11 AB987_1971 PF00163 Ribosomal protein S4/S9 N-terminal domain AB987_1971 PF01479 S4 domain AB987_1972 PF01000 RNA polymerase Rpb3/RpoA insert domain AB987_1972 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AB987_1972 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AB987_1973 PF01196 Ribosomal protein L17 AB987_1974 PF00743 Flavin-binding monooxygenase-like AB987_1975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_1975 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_1975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_1976 PF03937 Flavinator of succinate dehydrogenase AB987_1982 PF09526 Probable metal-binding protein (DUF2387) AB987_1983 PF01432 Peptidase family M3 AB987_1984 PF17876 Cold shock domain AB987_1984 PF00575 S1 RNA binding domain AB987_1984 PF00773 RNB domain AB987_1984 PF08206 Ribonuclease B OB domain AB987_1984 PF08461 Ribonuclease R winged-helix domain AB987_1988 PF13737 Transposase DDE domain AB987_1993 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB987_1994 PF12833 Helix-turn-helix domain AB987_1995 PF00892 EamA-like transporter family AB987_1996 PF03631 Virulence factor BrkB AB987_1997 PF03358 NADPH-dependent FMN reductase AB987_2002 PF02130 Uncharacterized protein family UPF0054 AB987_2003 PF02562 PhoH-like protein AB987_2004 PF04055 Radical SAM superfamily AB987_2004 PF00919 Uncharacterized protein family UPF0004 AB987_2004 PF01938 TRAM domain AB987_2005 PF01464 Transglycosylase SLT domain AB987_2005 PF01551 Peptidase family M23 AB987_2005 PF10145 Phage-related minor tail protein AB987_2007 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AB987_2007 PF00056 lactate/malate dehydrogenase, NAD binding domain AB987_2011 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AB987_2012 PF01066 CDP-alcohol phosphatidyltransferase AB987_2023 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2023 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2023 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2024 PF00440 Bacterial regulatory proteins, tetR family AB987_2024 PF17932 Tetracyclin repressor-like, C-terminal domain AB987_2028 PF01039 Carboxyl transferase domain AB987_2029 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2029 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2029 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2031 PF00364 Biotin-requiring enzyme AB987_2031 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_2031 PF02785 Biotin carboxylase C-terminal domain AB987_2031 PF00289 Biotin carboxylase, N-terminal domain AB987_2033 PF04386 Stringent starvation protein B AB987_2034 PF13417 Glutathione S-transferase, N-terminal domain AB987_2034 PF00043 Glutathione S-transferase, C-terminal domain AB987_2035 PF00380 Ribosomal protein S9/S16 AB987_2036 PF00572 Ribosomal protein L13 AB987_2037 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AB987_2038 PF00398 Ribosomal RNA adenine dimethylase AB987_2039 PF00149 Calcineurin-like phosphoesterase AB987_2043 PF01926 50S ribosome-binding GTPase AB987_2043 PF13167 GTP-binding GTPase N-terminal AB987_2043 PF16360 GTP-binding GTPase Middle Region AB987_2045 PF13091 PLD-like domain AB987_2046 PF10518 TAT (twin-arginine translocation) pathway signal sequence AB987_2046 PF00149 Calcineurin-like phosphoesterase AB987_2047 PF00691 OmpA family AB987_2047 PF01389 OmpA-like transmembrane domain AB987_2048 PF17152 Periplasmic sensor domain AB987_2048 PF00990 Diguanylate cyclase, GGDEF domain AB987_2056 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB987_2056 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_2058 PF04273 Putative phosphatase (DUF442) AB987_2058 PF00753 Metallo-beta-lactamase superfamily AB987_2059 PF00561 alpha/beta hydrolase fold AB987_2061 PF00085 Thioredoxin AB987_2062 PF03061 Thioesterase superfamily AB987_2064 PF04461 Protein of unknown function (DUF520) AB987_2066 PF01266 FAD dependent oxidoreductase AB987_2066 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AB987_2068 PF03795 YCII-related domain AB987_2069 PF04279 Intracellular septation protein A AB987_2070 PF02811 PHP domain AB987_2071 PF01062 Bestrophin, RFP-TM, chloride channel AB987_2072 PF04002 RadC-like JAB domain AB987_2073 PF04127 DNA / pantothenate metabolism flavoprotein AB987_2073 PF02441 Flavoprotein AB987_2074 PF07549 SecD/SecF GG Motif AB987_2074 PF02355 Protein export membrane protein AB987_2075 PF13721 SecD export protein N-terminal TM region AB987_2075 PF07549 SecD/SecF GG Motif AB987_2075 PF02355 Protein export membrane protein AB987_2076 PF02699 Preprotein translocase subunit AB987_2077 PF01702 Queuine tRNA-ribosyltransferase AB987_2080 PF02547 Queuosine biosynthesis protein AB987_2082 PF00512 His Kinase A (phospho-acceptor) domain AB987_2082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2082 PF07689 KaiB domain AB987_2083 PF03710 Glutamate-ammonia ligase adenylyltransferase AB987_2083 PF08335 GlnD PII-uridylyltransferase AB987_2084 PF01063 Amino-transferase class IV AB987_2086 PF01522 Polysaccharide deacetylase AB987_2087 PF00534 Glycosyl transferases group 1 AB987_2087 PF13439 Glycosyltransferase Family 4 AB987_2089 PF16363 GDP-mannose 4,6 dehydratase AB987_2090 PF04321 RmlD substrate binding domain AB987_2091 PF00483 Nucleotidyl transferase AB987_2092 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AB987_2093 PF00535 Glycosyl transferase family 2 AB987_2096 PF01336 OB-fold nucleic acid binding domain AB987_2096 PF00152 tRNA synthetases class II (D, K and N) AB987_2096 PF02938 GAD domain AB987_2099 PF07715 TonB-dependent Receptor Plug Domain AB987_2099 PF00593 TonB dependent receptor AB987_2103 PF06146 Phosphate-starvation-inducible E AB987_2104 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2104 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2104 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2104 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB987_2105 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB987_2105 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2107 PF00672 HAMP domain AB987_2107 PF00512 His Kinase A (phospho-acceptor) domain AB987_2107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2108 PF00072 Response regulator receiver domain AB987_2108 PF00486 Transcriptional regulatory protein, C terminal AB987_2109 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AB987_2113 PF01923 Cobalamin adenosyltransferase AB987_2114 PF00593 TonB dependent receptor AB987_2114 PF07715 TonB-dependent Receptor Plug Domain AB987_2115 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AB987_2116 PF00291 Pyridoxal-phosphate dependent enzyme AB987_2122 PF00290 Tryptophan synthase alpha chain AB987_2123 PF01039 Carboxyl transferase domain AB987_2124 PF02875 Mur ligase family, glutamate ligase domain AB987_2124 PF08245 Mur ligase middle domain AB987_2127 PF00753 Metallo-beta-lactamase superfamily AB987_2128 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB987_2128 PF00578 AhpC/TSA family AB987_2129 PF02810 SEC-C motif AB987_2129 PF07517 SecA DEAD-like domain AB987_2129 PF07516 SecA Wing and Scaffold domain AB987_2129 PF01043 SecA preprotein cross-linking domain AB987_2131 PF07690 Major Facilitator Superfamily AB987_2131 PF00083 Sugar (and other) transporter AB987_2132 PF03006 Haemolysin-III related AB987_2134 PF13673 Acetyltransferase (GNAT) domain AB987_2137 PF00378 Enoyl-CoA hydratase/isomerase AB987_2137 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB987_2137 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB987_2138 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB987_2138 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB987_2138 PF00378 Enoyl-CoA hydratase/isomerase AB987_2139 PF02803 Thiolase, C-terminal domain AB987_2139 PF00108 Thiolase, N-terminal domain AB987_2140 PF02311 AraC-like ligand binding domain AB987_2140 PF12833 Helix-turn-helix domain AB987_2141 PF02515 CoA-transferase family III AB987_2142 PF04966 Carbohydrate-selective porin, OprB family AB987_2144 PF01011 PQQ enzyme repeat AB987_2145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB987_2145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB987_2147 PF00893 Small Multidrug Resistance protein AB987_2149 PF02803 Thiolase, C-terminal domain AB987_2149 PF00108 Thiolase, N-terminal domain AB987_2151 PF13505 Outer membrane protein beta-barrel domain AB987_2151 PF00691 OmpA family AB987_2153 PF01139 tRNA-splicing ligase RtcB AB987_2154 PF00324 Amino acid permease AB987_2155 PF08468 Methyltransferase small domain N-terminal AB987_2155 PF05175 Methyltransferase small domain AB987_2156 PF00860 Permease family AB987_2158 PF01741 Large-conductance mechanosensitive channel, MscL AB987_2161 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB987_2161 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB987_2161 PF06827 Zinc finger found in FPG and IleRS AB987_2162 PF02245 Methylpurine-DNA glycosylase (MPG) AB987_2163 PF00593 TonB dependent receptor AB987_2163 PF07715 TonB-dependent Receptor Plug Domain AB987_2164 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_2165 PF03547 Membrane transport protein AB987_2167 PF10411 Disulfide bond isomerase protein N-terminus AB987_2167 PF13098 Thioredoxin-like domain AB987_2168 PF01571 Aminomethyltransferase folate-binding domain AB987_2170 PF04343 Protein of unknown function, DUF488 AB987_2171 PF03831 PhnA domain AB987_2171 PF08274 PhnA Zinc-Ribbon AB987_2172 PF07411 Domain of unknown function (DUF1508) AB987_2173 PF03129 Anticodon binding domain AB987_2173 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB987_2173 PF04073 Aminoacyl-tRNA editing domain AB987_2174 PF00873 AcrB/AcrD/AcrF family AB987_2177 PF00072 Response regulator receiver domain AB987_2178 PF00072 Response regulator receiver domain AB987_2179 PF01584 CheW-like domain AB987_2180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB987_2180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AB987_2181 PF00072 Response regulator receiver domain AB987_2181 PF01627 Hpt domain AB987_2181 PF01584 CheW-like domain AB987_2181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2183 PF07687 Peptidase dimerisation domain AB987_2183 PF01546 Peptidase family M20/M25/M40 AB987_2184 PF08085 Entericidin EcnA/B family AB987_2186 PF04304 Protein of unknown function (DUF454) AB987_2187 PF17969 L,D-transpeptidase C-terminal domain AB987_2187 PF03734 L,D-transpeptidase catalytic domain AB987_2195 PF00258 Flavodoxin AB987_2195 PF00175 Oxidoreductase NAD-binding domain AB987_2195 PF00667 FAD binding domain AB987_2197 PF12805 FUSC-like inner membrane protein yccS AB987_2198 PF07690 Major Facilitator Superfamily AB987_2199 PF00881 Nitroreductase family AB987_2202 PF01235 Sodium:alanine symporter family AB987_2203 PF01734 Patatin-like phospholipase AB987_2204 PF00291 Pyridoxal-phosphate dependent enzyme AB987_2204 PF13291 ACT domain AB987_2205 PF05992 SbmA/BacA-like family AB987_2206 PF01431 Peptidase family M13 AB987_2206 PF05649 Peptidase family M13 AB987_2211 PF02934 GatB/GatE catalytic domain AB987_2211 PF02637 GatB domain AB987_2212 PF01425 Amidase AB987_2213 PF02686 Glu-tRNAGln amidotransferase C subunit AB987_2215 PF04085 rod shape-determining protein MreC AB987_2217 PF02545 Maf-like protein AB987_2218 PF00575 S1 RNA binding domain AB987_2218 PF10150 Ribonuclease E/G family AB987_2220 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AB987_2220 PF06974 Protein of unknown function (DUF1298) AB987_2221 PF01507 Phosphoadenosine phosphosulfate reductase family AB987_2224 PF02525 Flavodoxin-like fold AB987_2228 PF02673 Bacitracin resistance protein BacA AB987_2229 PF12833 Helix-turn-helix domain AB987_2229 PF06719 AraC-type transcriptional regulator N-terminus AB987_2230 PF00109 Beta-ketoacyl synthase, N-terminal domain AB987_2230 PF00698 Acyl transferase domain AB987_2230 PF02801 Beta-ketoacyl synthase, C-terminal domain AB987_2230 PF16197 Ketoacyl-synthetase C-terminal extension AB987_2230 PF08659 KR domain AB987_2230 PF09277 Erythronolide synthase, docking AB987_2230 PF08990 Erythronolide synthase docking AB987_2230 PF08240 Alcohol dehydrogenase GroES-like domain AB987_2230 PF00550 Phosphopantetheine attachment site AB987_2230 PF14765 Polyketide synthase dehydratase AB987_2231 PF01965 DJ-1/PfpI family AB987_2234 PF13737 Transposase DDE domain AB987_2236 PF13737 Transposase DDE domain AB987_2240 PF00589 Phage integrase family AB987_2240 PF13356 Arm DNA-binding domain AB987_2242 PF00324 Amino acid permease AB987_2243 PF04303 PrpF protein AB987_2244 PF00348 Polyprenyl synthetase AB987_2245 PF04237 YjbR AB987_2246 PF01145 SPFH domain / Band 7 family AB987_2248 PF01734 Patatin-like phospholipase AB987_2252 PF00884 Sulfatase AB987_2252 PF08019 Phosphoethanolamine transferase EptA/EptB AB987_2253 PF00486 Transcriptional regulatory protein, C terminal AB987_2253 PF00072 Response regulator receiver domain AB987_2254 PF00512 His Kinase A (phospho-acceptor) domain AB987_2254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2254 PF08521 Two-component sensor kinase N-terminal AB987_2256 PF00909 Ammonium Transporter Family AB987_2257 PF03466 LysR substrate binding domain AB987_2257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2262 PF00133 tRNA synthetases class I (I, L, M and V) AB987_2262 PF10458 Valyl tRNA synthetase tRNA binding arm AB987_2262 PF08264 Anticodon-binding domain of tRNA AB987_2266 PF01906 Putative heavy-metal-binding AB987_2267 PF01906 Putative heavy-metal-binding AB987_2268 PF02321 Outer membrane efflux protein AB987_2269 PF00873 AcrB/AcrD/AcrF family AB987_2270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_2270 PF00529 HlyD membrane-fusion protein of T1SS AB987_2271 PF01569 PAP2 superfamily AB987_2273 PF00348 Polyprenyl synthetase AB987_2275 PF00829 Ribosomal prokaryotic L21 protein AB987_2276 PF01016 Ribosomal L27 protein AB987_2277 PF03548 Outer membrane lipoprotein carrier protein LolA AB987_2279 PF02403 Seryl-tRNA synthetase N-terminal domain AB987_2279 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB987_2280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB987_2280 PF14824 Sirohaem biosynthesis protein central AB987_2280 PF10414 Sirohaem synthase dimerisation region AB987_2281 PF00588 SpoU rRNA Methylase family AB987_2282 PF01638 HxlR-like helix-turn-helix AB987_2283 PF03358 NADPH-dependent FMN reductase AB987_2284 PF03358 NADPH-dependent FMN reductase AB987_2285 PF13520 Amino acid permease AB987_2286 PF00465 Iron-containing alcohol dehydrogenase AB987_2288 PF03099 Biotin/lipoate A/B protein ligase family AB987_2289 PF04359 Protein of unknown function (DUF493) AB987_2290 PF03979 Sigma-70 factor, region 1.1 AB987_2290 PF04546 Sigma-70, non-essential region AB987_2290 PF04542 Sigma-70 region 2 AB987_2290 PF04539 Sigma-70 region 3 AB987_2290 PF04545 Sigma-70, region 4 AB987_2290 PF00140 Sigma-70 factor, region 1.2 AB987_2296 PF00285 Citrate synthase, C-terminal domain AB987_2298 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB987_2299 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB987_2300 PF00890 FAD binding domain AB987_2300 PF02910 Fumarate reductase flavoprotein C-term AB987_2301 PF13085 2Fe-2S iron-sulfur cluster binding domain AB987_2302 PF02779 Transketolase, pyrimidine binding domain AB987_2302 PF16870 2-oxoglutarate dehydrogenase C-terminal AB987_2302 PF00676 Dehydrogenase E1 component AB987_2302 PF16078 2-oxoglutarate dehydrogenase N-terminus AB987_2303 PF02817 e3 binding domain AB987_2303 PF00364 Biotin-requiring enzyme AB987_2303 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB987_2304 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB987_2304 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_2305 PF00549 CoA-ligase AB987_2305 PF08442 ATP-grasp domain AB987_2306 PF00549 CoA-ligase AB987_2306 PF02629 CoA binding domain AB987_2307 PF00579 tRNA synthetases class I (W and Y) AB987_2308 PF05661 Protein of unknown function (DUF808) AB987_2309 PF04228 Putative neutral zinc metallopeptidase AB987_2310 PF00999 Sodium/hydrogen exchanger family AB987_2312 PF13737 Transposase DDE domain AB987_2315 PF00872 Transposase, Mutator family AB987_2316 PF13333 Integrase core domain AB987_2316 PF00665 Integrase core domain AB987_2316 PF13276 HTH-like domain AB987_2317 PF01527 Transposase AB987_2320 PF09587 Bacterial capsule synthesis protein PGA_cap AB987_2322 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB987_2323 PF00582 Universal stress protein family AB987_2324 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_2325 PF01042 Endoribonuclease L-PSP AB987_2326 PF00440 Bacterial regulatory proteins, tetR family AB987_2327 PF03449 Transcription elongation factor, N-terminal AB987_2327 PF01272 Transcription elongation factor, GreA/GreB, C-term AB987_2328 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_2328 PF02142 MGS-like domain AB987_2328 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB987_2329 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AB987_2329 PF00117 Glutamine amidotransferase class-I AB987_2332 PF01985 CRS1 / YhbY (CRM) domain AB987_2333 PF01728 FtsJ-like methyltransferase AB987_2334 PF01434 Peptidase family M41 AB987_2334 PF00004 ATPase family associated with various cellular activities (AAA) AB987_2334 PF17862 AAA+ lid domain AB987_2334 PF06480 FtsH Extracellular AB987_2335 PF00809 Pterin binding enzyme AB987_2339 PF09423 PhoD-like phosphatase AB987_2339 PF16655 PhoD-like phosphatase, N-terminal domain AB987_2342 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AB987_2342 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AB987_2345 PF00083 Sugar (and other) transporter AB987_2346 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB987_2346 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB987_2347 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB987_2347 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB987_2348 PF01266 FAD dependent oxidoreductase AB987_2348 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AB987_2349 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AB987_2349 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AB987_2350 PF00781 Diacylglycerol kinase catalytic domain AB987_2351 PF00149 Calcineurin-like phosphoesterase AB987_2352 PF00166 Chaperonin 10 Kd subunit AB987_2353 PF00118 TCP-1/cpn60 chaperonin family AB987_2354 PF01219 Prokaryotic diacylglycerol kinase AB987_2355 PF00753 Metallo-beta-lactamase superfamily AB987_2356 PF03009 Glycerophosphoryl diester phosphodiesterase family AB987_2357 PF00873 AcrB/AcrD/AcrF family AB987_2359 PF01435 Peptidase family M48 AB987_2360 PF01464 Transglycosylase SLT domain AB987_2361 PF01171 PP-loop family AB987_2363 PF01464 Transglycosylase SLT domain AB987_2363 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB987_2364 PF01272 Transcription elongation factor, GreA/GreB, C-term AB987_2364 PF03449 Transcription elongation factor, N-terminal AB987_2366 PF13333 Integrase core domain AB987_2366 PF00665 Integrase core domain AB987_2366 PF13276 HTH-like domain AB987_2375 PF02661 Fic/DOC family AB987_2377 PF02384 N-6 DNA Methylase AB987_2381 PF13333 Integrase core domain AB987_2381 PF00665 Integrase core domain AB987_2381 PF13276 HTH-like domain AB987_2392 PF00245 Alkaline phosphatase AB987_2393 PF00245 Alkaline phosphatase AB987_2395 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB987_2395 PF12833 Helix-turn-helix domain AB987_2396 PF00072 Response regulator receiver domain AB987_2396 PF00990 Diguanylate cyclase, GGDEF domain AB987_2398 PF02333 Phytase AB987_2399 PF01618 MotA/TolQ/ExbB proton channel family AB987_2400 PF02472 Biopolymer transport protein ExbD/TolR AB987_2402 PF00589 Phage integrase family AB987_2402 PF13356 Arm DNA-binding domain AB987_2404 PF00668 Condensation domain AB987_2404 PF13193 AMP-binding enzyme C-terminal domain AB987_2404 PF00501 AMP-binding enzyme AB987_2404 PF00550 Phosphopantetheine attachment site AB987_2404 PF00975 Thioesterase domain AB987_2405 PF08676 MutL C terminal dimerisation domain AB987_2405 PF01119 DNA mismatch repair protein, C-terminal domain AB987_2408 PF13359 DDE superfamily endonuclease AB987_2408 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_2409 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_2409 PF13359 DDE superfamily endonuclease AB987_2414 PF00881 Nitroreductase family AB987_2417 PF02595 Glycerate kinase family AB987_2418 PF00384 Molybdopterin oxidoreductase AB987_2419 PF02634 FdhD/NarQ family AB987_2420 PF06803 Protein of unknown function (DUF1232) AB987_2421 PF11890 Domain of unknown function (DUF3410) AB987_2421 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB987_2421 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB987_2422 PF00152 tRNA synthetases class II (D, K and N) AB987_2424 PF18073 Rubredoxin metal binding domain AB987_2425 PF00324 Amino acid permease AB987_2427 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB987_2427 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AB987_2428 PF01678 Diaminopimelate epimerase AB987_2429 PF01810 LysE type translocator AB987_2430 PF02899 Phage integrase, N-terminal SAM-like domain AB987_2430 PF00589 Phage integrase family AB987_2431 PF01012 Electron transfer flavoprotein domain AB987_2432 PF01012 Electron transfer flavoprotein domain AB987_2432 PF00766 Electron transfer flavoprotein FAD-binding domain AB987_2433 PF03989 DNA gyrase C-terminal domain, beta-propeller AB987_2433 PF00521 DNA gyrase/topoisomerase IV, subunit A AB987_2436 PF00535 Glycosyl transferase family 2 AB987_2440 PF13533 Biotin-lipoyl like AB987_2442 PF00266 Aminotransferase class-V AB987_2445 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AB987_2447 PF12704 MacB-like periplasmic core domain AB987_2447 PF02687 FtsX-like permease family AB987_2448 PF00005 ABC transporter AB987_2449 PF03772 Competence protein AB987_2449 PF13567 Domain of unknown function (DUF4131) AB987_2449 PF00753 Metallo-beta-lactamase superfamily AB987_2451 PF01343 Peptidase family S49 AB987_2451 PF06965 Na+/H+ antiporter 1 AB987_2452 PF12697 Alpha/beta hydrolase family AB987_2453 PF00551 Formyl transferase AB987_2454 PF00586 AIR synthase related protein, N-terminal domain AB987_2454 PF02769 AIR synthase related protein, C-terminal domain AB987_2455 PF01594 AI-2E family transporter AB987_2456 PF00308 Bacterial dnaA protein AB987_2456 PF08299 Bacterial dnaA protein helix-turn-helix AB987_2456 PF11638 DnaA N-terminal domain AB987_2462 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB987_2462 PF00588 SpoU rRNA Methylase family AB987_2463 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AB987_2465 PF00691 OmpA family AB987_2466 PF04052 TolB amino-terminal domain AB987_2466 PF07676 WD40-like Beta Propeller Repeat AB987_2468 PF02472 Biopolymer transport protein ExbD/TolR AB987_2469 PF01618 MotA/TolQ/ExbB proton channel family AB987_2470 PF03061 Thioesterase superfamily AB987_2471 PF01546 Peptidase family M20/M25/M40 AB987_2471 PF07687 Peptidase dimerisation domain AB987_2472 PF01546 Peptidase family M20/M25/M40 AB987_2472 PF07687 Peptidase dimerisation domain AB987_2473 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB987_2473 PF17864 RuvB AAA lid domain AB987_2473 PF05491 RuvB C-terminal winged helix domain AB987_2474 PF07499 RuvA, C-terminal domain AB987_2474 PF01330 RuvA N terminal domain AB987_2475 PF01966 HD domain AB987_2476 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AB987_2476 PF02769 AIR synthase related protein, C-terminal domain AB987_2476 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AB987_2477 PF07690 Major Facilitator Superfamily AB987_2479 PF01784 NIF3 (NGG1p interacting factor 3) AB987_2480 PF00378 Enoyl-CoA hydratase/isomerase AB987_2481 PF01467 Cytidylyltransferase-like AB987_2481 PF00293 NUDIX domain AB987_2483 PF00578 AhpC/TSA family AB987_2486 PF06508 Queuosine biosynthesis protein QueC AB987_2488 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AB987_2488 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_2488 PF14602 Hexapeptide repeat of succinyl-transferase AB987_2490 PF03466 LysR substrate binding domain AB987_2490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2491 PF00005 ABC transporter AB987_2491 PF12857 TOBE-like domain AB987_2492 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2493 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2497 PF01063 Amino-transferase class IV AB987_2498 PF02618 YceG-like family AB987_2499 PF02223 Thymidylate kinase AB987_2501 PF02910 Fumarate reductase flavoprotein C-term AB987_2501 PF00890 FAD binding domain AB987_2502 PF13180 PDZ domain AB987_2504 PF13302 Acetyltransferase (GNAT) domain AB987_2505 PF06421 GTP-binding protein LepA C-terminus AB987_2505 PF00679 Elongation factor G C-terminus AB987_2505 PF00009 Elongation factor Tu GTP binding domain AB987_2505 PF03144 Elongation factor Tu domain 2 AB987_2506 PF10502 Signal peptidase, peptidase S26 AB987_2508 PF00035 Double-stranded RNA binding motif AB987_2508 PF14622 Ribonuclease-III-like AB987_2509 PF07650 KH domain AB987_2509 PF01926 50S ribosome-binding GTPase AB987_2511 PF11967 Recombination protein O N terminal AB987_2511 PF02565 Recombination protein O C terminal AB987_2512 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AB987_2513 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AB987_2514 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_2514 PF13359 DDE superfamily endonuclease AB987_2515 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_2515 PF13359 DDE superfamily endonuclease AB987_2516 PF00106 short chain dehydrogenase AB987_2523 PF00990 Diguanylate cyclase, GGDEF domain AB987_2523 PF17151 Periplasmic sensor domain AB987_2525 PF00271 Helicase conserved C-terminal domain AB987_2525 PF04851 Type III restriction enzyme, res subunit AB987_2525 PF12344 Ultra-violet resistance protein B AB987_2525 PF02151 UvrB/uvrC motif AB987_2525 PF17757 UvrB interaction domain AB987_2527 PF00892 EamA-like transporter family AB987_2528 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB987_2528 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB987_2531 PF01018 GTP1/OBG AB987_2531 PF01926 50S ribosome-binding GTPase AB987_2532 PF00696 Amino acid kinase family AB987_2532 PF01472 PUA domain AB987_2534 PF07759 Protein of unknown function (DUF1615) AB987_2535 PF01207 Dihydrouridine synthase (Dus) AB987_2536 PF03060 Nitronate monooxygenase AB987_2539 PF02350 UDP-N-acetylglucosamine 2-epimerase AB987_2544 PF13737 Transposase DDE domain AB987_2545 PF00875 DNA photolyase AB987_2545 PF03441 FAD binding domain of DNA photolyase AB987_2546 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB987_2547 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_2548 PF00768 D-alanyl-D-alanine carboxypeptidase AB987_2548 PF07943 Penicillin-binding protein 5, C-terminal domain AB987_2550 PF03971 Monomeric isocitrate dehydrogenase AB987_2551 PF00849 RNA pseudouridylate synthase AB987_2552 PF00180 Isocitrate/isopropylmalate dehydrogenase AB987_2556 PF06779 Uncharacterised MFS-type transporter YbfB AB987_2557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2557 PF03466 LysR substrate binding domain AB987_2559 PF02567 Phenazine biosynthesis-like protein AB987_2560 PF05193 Peptidase M16 inactive domain AB987_2560 PF00675 Insulinase (Peptidase family M16) AB987_2565 PF02581 Thiamine monophosphate synthase AB987_2566 PF00202 Aminotransferase class-III AB987_2568 PF00849 RNA pseudouridylate synthase AB987_2569 PF18339 RapA N-terminal Tudor like domain 1 AB987_2569 PF18337 RapA N-terminal Tudor like domain AB987_2569 PF00271 Helicase conserved C-terminal domain AB987_2569 PF12137 RNA polymerase recycling family C-terminal AB987_2569 PF00176 SNF2 family N-terminal domain AB987_2572 PF00440 Bacterial regulatory proteins, tetR family AB987_2573 PF00970 Oxidoreductase FAD-binding domain AB987_2573 PF00175 Oxidoreductase NAD-binding domain AB987_2573 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_2574 PF00487 Fatty acid desaturase AB987_2576 PF17754 MftR C-terminal domain AB987_2576 PF00440 Bacterial regulatory proteins, tetR family AB987_2578 PF00202 Aminotransferase class-III AB987_2579 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB987_2580 PF00171 Aldehyde dehydrogenase family AB987_2581 PF01037 Lrp/AsnC ligand binding domain AB987_2582 PF00205 Thiamine pyrophosphate enzyme, central domain AB987_2582 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB987_2582 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB987_2583 PF00324 Amino acid permease AB987_2584 PF12849 PBP superfamily domain AB987_2585 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2586 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2587 PF00005 ABC transporter AB987_2588 PF01343 Peptidase family S49 AB987_2588 PF08496 Peptidase family S49 N-terminal AB987_2592 PF08328 Adenylosuccinate lyase C-terminal AB987_2592 PF00206 Lyase AB987_2593 PF04356 Protein of unknown function (DUF489) AB987_2595 PF00293 NUDIX domain AB987_2595 PF13344 Haloacid dehalogenase-like hydrolase AB987_2596 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_2597 PF00768 D-alanyl-D-alanine carboxypeptidase AB987_2597 PF07943 Penicillin-binding protein 5, C-terminal domain AB987_2600 PF01975 Survival protein SurE AB987_2601 PF01551 Peptidase family M23 AB987_2601 PF01476 LysM domain AB987_2602 PF03466 LysR substrate binding domain AB987_2602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2603 PF13654 AAA domain AB987_2603 PF05362 Lon protease (S16) C-terminal proteolytic domain AB987_2605 PF07690 Major Facilitator Superfamily AB987_2606 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB987_2607 PF13593 SBF-like CPA transporter family (DUF4137) AB987_2608 PF01197 Ribosomal protein L31 AB987_2609 PF00563 EAL domain AB987_2609 PF12792 CSS motif domain associated with EAL AB987_2611 PF04055 Radical SAM superfamily AB987_2612 PF01132 Elongation factor P (EF-P) OB domain AB987_2612 PF08207 Elongation factor P (EF-P) KOW-like domain AB987_2612 PF09285 Elongation factor P, C-terminal AB987_2613 PF13722 5TM C-terminal transporter carbon starvation CstA AB987_2613 PF02554 Carbon starvation protein CstA AB987_2614 PF04328 Selenoprotein, putative AB987_2621 PF17954 Quercetinase C-terminal cupin domain AB987_2621 PF02678 Pirin AB987_2622 PF00291 Pyridoxal-phosphate dependent enzyme AB987_2623 PF13309 HTH domain AB987_2623 PF08348 YheO-like PAS domain AB987_2625 PF13193 AMP-binding enzyme C-terminal domain AB987_2625 PF00501 AMP-binding enzyme AB987_2625 PF00550 Phosphopantetheine attachment site AB987_2625 PF00668 Condensation domain AB987_2626 PF00975 Thioesterase domain AB987_2626 PF00501 AMP-binding enzyme AB987_2626 PF13193 AMP-binding enzyme C-terminal domain AB987_2626 PF00668 Condensation domain AB987_2626 PF00550 Phosphopantetheine attachment site AB987_2628 PF01032 FecCD transport family AB987_2629 PF01032 FecCD transport family AB987_2630 PF00005 ABC transporter AB987_2631 PF01497 Periplasmic binding protein AB987_2632 PF00593 TonB dependent receptor AB987_2632 PF07715 TonB-dependent Receptor Plug Domain AB987_2633 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB987_2634 PF00501 AMP-binding enzyme AB987_2634 PF00668 Condensation domain AB987_2634 PF00550 Phosphopantetheine attachment site AB987_2635 PF00501 AMP-binding enzyme AB987_2635 PF13193 AMP-binding enzyme C-terminal domain AB987_2636 PF00550 Phosphopantetheine attachment site AB987_2636 PF00857 Isochorismatase family AB987_2637 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB987_2639 PF00005 ABC transporter AB987_2639 PF00664 ABC transporter transmembrane region AB987_2640 PF00664 ABC transporter transmembrane region AB987_2640 PF00005 ABC transporter AB987_2641 PF00975 Thioesterase domain AB987_2643 PF00425 chorismate binding enzyme AB987_2645 PF01208 Uroporphyrinogen decarboxylase (URO-D) AB987_2646 PF05675 Protein of unknown function (DUF817) AB987_2650 PF00144 Beta-lactamase AB987_2652 PF01799 [2Fe-2S] binding domain AB987_2652 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_2653 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB987_2653 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AB987_2656 PF00218 Indole-3-glycerol phosphate synthase AB987_2657 PF00591 Glycosyl transferase family, a/b domain AB987_2657 PF02885 Glycosyl transferase family, helical bundle domain AB987_2658 PF00593 TonB dependent receptor AB987_2658 PF07715 TonB-dependent Receptor Plug Domain AB987_2659 PF11838 ERAP1-like C-terminal domain AB987_2659 PF01433 Peptidase family M1 domain AB987_2660 PF00117 Glutamine amidotransferase class-I AB987_2662 PF00854 POT family AB987_2664 PF04345 Chorismate lyase AB987_2665 PF01040 UbiA prenyltransferase family AB987_2672 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB987_2672 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB987_2673 PF01784 NIF3 (NGG1p interacting factor 3) AB987_2674 PF13180 PDZ domain AB987_2675 PF12627 Probable RNA and SrmB- binding site of polymerase A AB987_2675 PF01743 Poly A polymerase head domain AB987_2676 PF00390 Malic enzyme, N-terminal domain AB987_2676 PF03949 Malic enzyme, NAD binding domain AB987_2676 PF01515 Phosphate acetyl/butaryl transferase AB987_2677 PF00563 EAL domain AB987_2677 PF00990 Diguanylate cyclase, GGDEF domain AB987_2677 PF03707 Bacterial signalling protein N terminal repeat AB987_2678 PF04452 RNA methyltransferase AB987_2679 PF02219 Methylenetetrahydrofolate reductase AB987_2680 PF05221 S-adenosyl-L-homocysteine hydrolase AB987_2680 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB987_2683 PF09317 Domain of unknown function (DUF1974) AB987_2683 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2683 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2684 PF04055 Radical SAM superfamily AB987_2685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB987_2685 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_2688 PF07690 Major Facilitator Superfamily AB987_2690 PF00557 Metallopeptidase family M24 AB987_2691 PF00318 Ribosomal protein S2 AB987_2692 PF00889 Elongation factor TS AB987_2694 PF12833 Helix-turn-helix domain AB987_2695 PF13737 Transposase DDE domain AB987_2697 PF05036 Sporulation related domain AB987_2697 PF03330 Lytic transglycolase AB987_2698 PF13406 Transglycosylase SLT domain AB987_2699 PF01098 Cell cycle protein AB987_2701 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AB987_2701 PF14489 QueF-like protein AB987_2702 PF01061 ABC-2 type transporter AB987_2703 PF00005 ABC transporter AB987_2709 PF00464 Serine hydroxymethyltransferase AB987_2710 PF02321 Outer membrane efflux protein AB987_2711 PF00873 AcrB/AcrD/AcrF family AB987_2712 PF13533 Biotin-lipoyl like AB987_2713 PF03466 LysR substrate binding domain AB987_2713 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2714 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB987_2715 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2716 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2717 PF00005 ABC transporter AB987_2718 PF00893 Small Multidrug Resistance protein AB987_2719 PF00037 4Fe-4S binding domain AB987_2721 PF00392 Bacterial regulatory proteins, gntR family AB987_2721 PF00155 Aminotransferase class I and II AB987_2722 PF02567 Phenazine biosynthesis-like protein AB987_2723 PF00970 Oxidoreductase FAD-binding domain AB987_2723 PF00175 Oxidoreductase NAD-binding domain AB987_2724 PF01980 tRNA-methyltransferase O AB987_2724 PF18389 TrmO C-terminal domain AB987_2726 PF00437 Type II/IV secretion system protein AB987_2728 PF00486 Transcriptional regulatory protein, C terminal AB987_2728 PF00072 Response regulator receiver domain AB987_2729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2729 PF08521 Two-component sensor kinase N-terminal AB987_2729 PF00512 His Kinase A (phospho-acceptor) domain AB987_2731 PF00293 NUDIX domain AB987_2733 PF00912 Transglycosylase AB987_2733 PF00905 Penicillin binding protein transpeptidase domain AB987_2733 PF14814 Bifunctional transglycosylase second domain AB987_2734 PF01513 ATP-NAD kinase AB987_2735 PF07023 Protein of unknown function (DUF1315) AB987_2736 PF02885 Glycosyl transferase family, helical bundle domain AB987_2736 PF00591 Glycosyl transferase family, a/b domain AB987_2737 PF00375 Sodium:dicarboxylate symporter family AB987_2738 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2738 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2738 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2740 PF01817 Chorismate mutase type II AB987_2740 PF01842 ACT domain AB987_2740 PF00800 Prephenate dehydratase AB987_2741 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB987_2743 PF01546 Peptidase family M20/M25/M40 AB987_2743 PF07687 Peptidase dimerisation domain AB987_2744 PF00753 Metallo-beta-lactamase superfamily AB987_2746 PF03883 Peroxide stress protein YaaA AB987_2748 PF05690 Thiazole biosynthesis protein ThiG AB987_2750 PF04241 Protein of unknown function (DUF423) AB987_2751 PF04545 Sigma-70, region 4 AB987_2751 PF00140 Sigma-70 factor, region 1.2 AB987_2751 PF04542 Sigma-70 region 2 AB987_2753 PF00313 'Cold-shock' DNA-binding domain AB987_2754 PF00270 DEAD/DEAH box helicase AB987_2754 PF00271 Helicase conserved C-terminal domain AB987_2756 PF00881 Nitroreductase family AB987_2757 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AB987_2757 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AB987_2761 PF01180 Dihydroorotate dehydrogenase AB987_2762 PF02674 Colicin V production protein AB987_2763 PF00156 Phosphoribosyl transferase domain AB987_2766 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB987_2766 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB987_2767 PF01435 Peptidase family M48 AB987_2768 PF09424 Yqey-like protein AB987_2769 PF01165 Ribosomal protein S21 AB987_2770 PF00814 Glycoprotease family AB987_2774 PF00069 Protein kinase domain AB987_2779 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2779 PF03466 LysR substrate binding domain AB987_2780 PF00202 Aminotransferase class-III AB987_2781 PF00171 Aldehyde dehydrogenase family AB987_2782 PF00324 Amino acid permease AB987_2789 PF04076 Bacterial OB fold (BOF) protein AB987_2795 PF00561 alpha/beta hydrolase fold AB987_2796 PF03616 Sodium/glutamate symporter AB987_2798 PF00392 Bacterial regulatory proteins, gntR family AB987_2798 PF07729 FCD domain AB987_2801 PF13737 Transposase DDE domain AB987_2809 PF00083 Sugar (and other) transporter AB987_2809 PF08946 Osmosensory transporter coiled coil AB987_2810 PF00293 NUDIX domain AB987_2811 PF13737 Transposase DDE domain AB987_2815 PF13333 Integrase core domain AB987_2815 PF00665 Integrase core domain AB987_2815 PF13276 HTH-like domain AB987_2821 PF04403 Paraquat-inducible protein A AB987_2822 PF02470 MlaD protein AB987_2824 PF01177 Asp/Glu/Hydantoin racemase AB987_2825 PF00892 EamA-like transporter family AB987_2826 PF07995 Glucose / Sorbosone dehydrogenase AB987_2830 PF00375 Sodium:dicarboxylate symporter family AB987_2832 PF00753 Metallo-beta-lactamase superfamily AB987_2832 PF16123 Hydroxyacylglutathione hydrolase C-terminus AB987_2833 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2834 PF00005 ABC transporter AB987_2834 PF09383 NIL domain AB987_2835 PF03180 NLPA lipoprotein AB987_2836 PF02843 Phosphoribosylglycinamide synthetase, C domain AB987_2836 PF02844 Phosphoribosylglycinamide synthetase, N domain AB987_2836 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AB987_2837 PF01808 AICARFT/IMPCHase bienzyme AB987_2837 PF02142 MGS-like domain AB987_2838 PF02954 Bacterial regulatory protein, Fis family AB987_2842 PF13932 GidA associated domain AB987_2842 PF01134 Glucose inhibited division protein A AB987_2844 PF14403 Circularly permuted ATP-grasp type 2 AB987_2845 PF14403 Circularly permuted ATP-grasp type 2 AB987_2847 PF01841 Transglutaminase-like superfamily AB987_2847 PF08379 Bacterial transglutaminase-like N-terminal region AB987_2849 PF01168 Alanine racemase, N-terminal domain AB987_2849 PF00842 Alanine racemase, C-terminal domain AB987_2850 PF03796 DnaB-like helicase C terminal domain AB987_2850 PF00772 DnaB-like helicase N terminal domain AB987_2851 PF01281 Ribosomal protein L9, N-terminal domain AB987_2851 PF03948 Ribosomal protein L9, C-terminal domain AB987_2852 PF01084 Ribosomal protein S18 AB987_2853 PF01250 Ribosomal protein S6 AB987_2854 PF01040 UbiA prenyltransferase family AB987_2855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AB987_2856 PF00510 Cytochrome c oxidase subunit III AB987_2858 PF00115 Cytochrome C and Quinol oxidase polypeptide I AB987_2859 PF06481 COX Aromatic Rich Motif AB987_2859 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AB987_2861 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AB987_2861 PF02896 PEP-utilising enzyme, TIM barrel domain AB987_2861 PF00391 PEP-utilising enzyme, mobile domain AB987_2862 PF03618 Kinase/pyrophosphorylase AB987_2864 PF01522 Polysaccharide deacetylase AB987_2864 PF14883 Hypothetical glycosyl hydrolase family 13 AB987_2865 PF13737 Transposase DDE domain AB987_2866 PF00535 Glycosyl transferase family 2 AB987_2867 PF13994 PgaD-like protein AB987_2869 PF00296 Luciferase-like monooxygenase AB987_2872 PF03466 LysR substrate binding domain AB987_2872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2874 PF00472 RF-1 domain AB987_2874 PF03462 PCRF domain AB987_2875 PF17827 PrmC N-terminal domain AB987_2875 PF13847 Methyltransferase domain AB987_2876 PF00528 Binding-protein-dependent transport system inner membrane component AB987_2877 PF09084 NMT1/THI5 like AB987_2878 PF12833 Helix-turn-helix domain AB987_2879 PF00106 short chain dehydrogenase AB987_2880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_2880 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_2880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_2881 PF13193 AMP-binding enzyme C-terminal domain AB987_2881 PF00501 AMP-binding enzyme AB987_2882 PF01613 Flavin reductase like domain AB987_2883 PF00899 ThiF family AB987_2884 PF03109 ABC1 family AB987_2885 PF02152 Dihydroneopterin aldolase AB987_2887 PF03814 Potassium-transporting ATPase A subunit AB987_2889 PF02669 K+-transporting ATPase, c chain AB987_2890 PF02702 Osmosensitive K+ channel His kinase sensor domain AB987_2890 PF00512 His Kinase A (phospho-acceptor) domain AB987_2890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_2890 PF13493 Domain of unknown function (DUF4118) AB987_2891 PF00072 Response regulator receiver domain AB987_2891 PF00486 Transcriptional regulatory protein, C terminal AB987_2892 PF00120 Glutamine synthetase, catalytic domain AB987_2894 PF03232 Ubiquinone biosynthesis protein COQ7 AB987_2895 PF07690 Major Facilitator Superfamily AB987_2896 PF01103 Surface antigen AB987_2896 PF17243 POTRA domain TamA domain 1 AB987_2896 PF07244 Surface antigen variable number repeat AB987_2899 PF00330 Aconitase family (aconitate hydratase) AB987_2899 PF06434 Aconitate hydratase 2 N-terminus AB987_2899 PF11791 Aconitate B N-terminal domain AB987_2901 PF00520 Ion transport protein AB987_2901 PF00027 Cyclic nucleotide-binding domain AB987_2902 PF07690 Major Facilitator Superfamily AB987_2911 PF00216 Bacterial DNA-binding protein AB987_2917 PF13401 AAA domain AB987_2917 PF01471 Putative peptidoglycan binding domain AB987_2921 PF06074 Protein of unknown function (DUF935) AB987_2922 PF04233 Phage Mu protein F like protein AB987_2923 PF05069 Phage virion morphogenesis family AB987_2926 PF10124 Mu-like prophage major head subunit gpT AB987_2946 PF03466 LysR substrate binding domain AB987_2946 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_2947 PF04284 Protein of unknown function (DUF441) AB987_2949 PF00849 RNA pseudouridylate synthase AB987_2949 PF01479 S4 domain AB987_2952 PF01479 S4 domain AB987_2952 PF00849 RNA pseudouridylate synthase AB987_2953 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AB987_2954 PF08676 MutL C terminal dimerisation domain AB987_2954 PF01119 DNA mismatch repair protein, C-terminal domain AB987_2956 PF17209 Hfq protein AB987_2958 PF00881 Nitroreductase family AB987_2961 PF00149 Calcineurin-like phosphoesterase AB987_2962 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB987_2963 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB987_2963 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AB987_2965 PF00958 GMP synthase C terminal domain AB987_2965 PF00117 Glutamine amidotransferase class-I AB987_2965 PF02540 NAD synthase AB987_2966 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AB987_2967 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AB987_2968 PF13520 Amino acid permease AB987_2969 PF00171 Aldehyde dehydrogenase family AB987_2972 PF00465 Iron-containing alcohol dehydrogenase AB987_2973 PF05970 PIF1-like helicase AB987_2973 PF14493 Helix-turn-helix domain AB987_2975 PF06445 GyrI-like small molecule binding domain AB987_2976 PF02110 Hydroxyethylthiazole kinase family AB987_2979 PF01433 Peptidase family M1 domain AB987_2979 PF11940 Domain of unknown function (DUF3458) Ig-like fold AB987_2979 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AB987_2983 PF01817 Chorismate mutase type II AB987_2984 PF01037 Lrp/AsnC ligand binding domain AB987_2985 PF13737 Transposase DDE domain AB987_2988 PF13737 Transposase DDE domain AB987_2991 PF00593 TonB dependent receptor AB987_2991 PF07715 TonB-dependent Receptor Plug Domain AB987_2994 PF13737 Transposase DDE domain AB987_2996 PF00005 ABC transporter AB987_2996 PF12848 ABC transporter AB987_2997 PF00582 Universal stress protein family AB987_2999 PF13737 Transposase DDE domain AB987_3002 PF00689 Cation transporting ATPase, C-terminus AB987_3002 PF00690 Cation transporter/ATPase, N-terminus AB987_3003 PF02308 MgtC family AB987_3004 PF03594 Benzoate membrane transport protein AB987_3005 PF01037 Lrp/AsnC ligand binding domain AB987_3006 PF01810 LysE type translocator AB987_3008 PF03466 LysR substrate binding domain AB987_3008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3010 PF02803 Thiolase, C-terminal domain AB987_3010 PF00108 Thiolase, N-terminal domain AB987_3015 PF07690 Major Facilitator Superfamily AB987_3016 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AB987_3016 PF12169 DNA polymerase III subunits gamma and tau domain III AB987_3016 PF12170 DNA polymerase III tau subunit V interacting with alpha AB987_3017 PF05506 Domain of unknown function (DUF756) AB987_3017 PF04185 Phosphoesterase family AB987_3018 PF05506 Domain of unknown function (DUF756) AB987_3018 PF04185 Phosphoesterase family AB987_3019 PF03061 Thioesterase superfamily AB987_3020 PF00465 Iron-containing alcohol dehydrogenase AB987_3022 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB987_3023 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AB987_3023 PF01565 FAD binding domain AB987_3026 PF01645 Conserved region in glutamate synthase AB987_3029 PF00665 Integrase core domain AB987_3029 PF13936 Helix-turn-helix domain AB987_3032 PF12832 MFS_1 like family AB987_3034 PF02785 Biotin carboxylase C-terminal domain AB987_3034 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB987_3034 PF00289 Biotin carboxylase, N-terminal domain AB987_3035 PF00364 Biotin-requiring enzyme AB987_3036 PF01220 Dehydroquinase class II AB987_3037 PF11799 impB/mucB/samB family C-terminal domain AB987_3037 PF00817 impB/mucB/samB family AB987_3037 PF13438 Domain of unknown function (DUF4113) AB987_3038 PF00005 ABC transporter AB987_3039 PF00486 Transcriptional regulatory protein, C terminal AB987_3039 PF00072 Response regulator receiver domain AB987_3041 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB987_3041 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB987_3041 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB987_3041 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3041 PF04324 BFD-like [2Fe-2S] binding domain AB987_3041 PF13806 Rieske-like [2Fe-2S] domain AB987_3042 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB987_3042 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB987_3042 PF04324 BFD-like [2Fe-2S] binding domain AB987_3042 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3042 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB987_3043 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB987_3043 PF04324 BFD-like [2Fe-2S] binding domain AB987_3043 PF00384 Molybdopterin oxidoreductase AB987_3043 PF01568 Molydopterin dinucleotide binding domain AB987_3044 PF12804 MobA-like NTP transferase domain AB987_3045 PF00384 Molybdopterin oxidoreductase AB987_3045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB987_3045 PF01568 Molydopterin dinucleotide binding domain AB987_3046 PF06463 Molybdenum Cofactor Synthesis C AB987_3046 PF04055 Radical SAM superfamily AB987_3048 PF02391 MoaE protein AB987_3049 PF00994 Probable molybdopterin binding domain AB987_3049 PF01967 MoaC family AB987_3050 PF00994 Probable molybdopterin binding domain AB987_3050 PF03454 MoeA C-terminal region (domain IV) AB987_3050 PF03453 MoeA N-terminal region (domain I and II) AB987_3051 PF01638 HxlR-like helix-turn-helix AB987_3052 PF00155 Aminotransferase class I and II AB987_3052 PF00392 Bacterial regulatory proteins, gntR family AB987_3054 PF00892 EamA-like transporter family AB987_3058 PF02635 DsrE/DsrF-like family AB987_3059 PF16363 GDP-mannose 4,6 dehydratase AB987_3060 PF10415 Fumarase C C-terminus AB987_3060 PF00206 Lyase AB987_3064 PF01266 FAD dependent oxidoreductase AB987_3066 PF02542 YgbB family AB987_3068 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB987_3068 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB987_3069 PF00440 Bacterial regulatory proteins, tetR family AB987_3070 PF13737 Transposase DDE domain AB987_3071 PF02954 Bacterial regulatory protein, Fis family AB987_3071 PF00072 Response regulator receiver domain AB987_3071 PF00158 Sigma-54 interaction domain AB987_3072 PF00512 His Kinase A (phospho-acceptor) domain AB987_3072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_3072 PF00989 PAS fold AB987_3073 PF04055 Radical SAM superfamily AB987_3073 PF18693 TRAM domain AB987_3073 PF00919 Uncharacterized protein family UPF0004 AB987_3074 PF00696 Amino acid kinase family AB987_3075 PF01765 Ribosome recycling factor AB987_3076 PF01255 Putative undecaprenyl diphosphate synthase AB987_3078 PF13288 DXP reductoisomerase C-terminal domain AB987_3078 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AB987_3078 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AB987_3079 PF17820 PDZ domain AB987_3079 PF02163 Peptidase family M50 AB987_3079 PF13180 PDZ domain AB987_3080 PF01103 Surface antigen AB987_3080 PF07244 Surface antigen variable number repeat AB987_3082 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AB987_3082 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_3083 PF07977 FabA-like domain AB987_3084 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AB987_3084 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_3086 PF02631 RecX family AB987_3087 PF00154 recA bacterial DNA recombination protein AB987_3088 PF01479 S4 domain AB987_3089 PF13419 Haloacid dehalogenase-like hydrolase AB987_3095 PF01037 Lrp/AsnC ligand binding domain AB987_3096 PF00266 Aminotransferase class-V AB987_3097 PF00324 Amino acid permease AB987_3099 PF13737 Transposase DDE domain AB987_3100 PF00082 Subtilase family AB987_3100 PF05922 Peptidase inhibitor I9 AB987_3101 PF00916 Sulfate permease family AB987_3101 PF01740 STAS domain AB987_3103 PF07995 Glucose / Sorbosone dehydrogenase AB987_3105 PF00563 EAL domain AB987_3105 PF00990 Diguanylate cyclase, GGDEF domain AB987_3105 PF03707 Bacterial signalling protein N terminal repeat AB987_3108 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB987_3108 PF02378 Phosphotransferase system, EIIC AB987_3109 PF00294 pfkB family carbohydrate kinase AB987_3110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB987_3110 PF02896 PEP-utilising enzyme, TIM barrel domain AB987_3110 PF00391 PEP-utilising enzyme, mobile domain AB987_3110 PF00381 PTS HPr component phosphorylation site AB987_3110 PF05524 PEP-utilising enzyme, N-terminal AB987_3114 PF05525 Branched-chain amino acid transport protein AB987_3115 PF00557 Metallopeptidase family M24 AB987_3116 PF03466 LysR substrate binding domain AB987_3116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3118 PF00462 Glutaredoxin AB987_3119 PF00202 Aminotransferase class-III AB987_3120 PF00571 CBS domain AB987_3120 PF00478 IMP dehydrogenase / GMP reductase domain AB987_3126 PF02881 SRP54-type protein, helical bundle domain AB987_3126 PF00448 SRP54-type protein, GTPase domain AB987_3128 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AB987_3130 PF02322 Cytochrome bd terminal oxidase subunit II AB987_3131 PF01654 Cytochrome bd terminal oxidase subunit I AB987_3132 PF07290 Protein of unknown function (DUF1449) AB987_3134 PF00294 pfkB family carbohydrate kinase AB987_3135 PF00593 TonB dependent receptor AB987_3135 PF07715 TonB-dependent Receptor Plug Domain AB987_3136 PF05193 Peptidase M16 inactive domain AB987_3136 PF08367 Peptidase M16C associated AB987_3136 PF00675 Insulinase (Peptidase family M16) AB987_3137 PF02253 Phospholipase A1 AB987_3138 PF02386 Cation transport protein AB987_3139 PF02254 TrkA-N domain AB987_3139 PF02080 TrkA-C domain AB987_3140 PF00291 Pyridoxal-phosphate dependent enzyme AB987_3140 PF00585 C-terminal regulatory domain of Threonine dehydratase AB987_3141 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AB987_3145 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB987_3145 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB987_3147 PF02617 ATP-dependent Clp protease adaptor protein ClpS AB987_3148 PF17871 AAA lid domain AB987_3148 PF00004 ATPase family associated with various cellular activities (AAA) AB987_3148 PF10431 C-terminal, D2-small domain, of ClpB protein AB987_3148 PF07724 AAA domain (Cdc48 subfamily) AB987_3148 PF02861 Clp amino terminal domain, pathogenicity island component AB987_3149 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AB987_3150 PF00793 DAHP synthetase I family AB987_3153 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_3153 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3159 PF06418 CTP synthase N-terminus AB987_3159 PF00117 Glutamine amidotransferase class-I AB987_3160 PF00793 DAHP synthetase I family AB987_3161 PF03952 Enolase, N-terminal domain AB987_3161 PF00113 Enolase, C-terminal TIM barrel domain AB987_3162 PF04239 Protein of unknown function (DUF421) AB987_3163 PF04977 Septum formation initiator AB987_3164 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AB987_3165 PF01144 Coenzyme A transferase AB987_3166 PF01144 Coenzyme A transferase AB987_3167 PF00108 Thiolase, N-terminal domain AB987_3167 PF02803 Thiolase, C-terminal domain AB987_3168 PF10397 Adenylosuccinate lyase C-terminus AB987_3168 PF00206 Lyase AB987_3169 PF00561 alpha/beta hydrolase fold AB987_3170 PF07690 Major Facilitator Superfamily AB987_3171 PF02627 Carboxymuconolactone decarboxylase family AB987_3172 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AB987_3172 PF00775 Dioxygenase AB987_3173 PF00775 Dioxygenase AB987_3174 PF01487 Type I 3-dehydroquinase AB987_3175 PF05048 Periplasmic copper-binding protein (NosD) AB987_3176 PF04966 Carbohydrate-selective porin, OprB family AB987_3177 PF13360 PQQ-like domain AB987_3177 PF01011 PQQ enzyme repeat AB987_3179 PF04143 Sulphur transport AB987_3181 PF00753 Metallo-beta-lactamase superfamily AB987_3182 PF09339 IclR helix-turn-helix domain AB987_3182 PF01614 Bacterial transcriptional regulator AB987_3183 PF03466 LysR substrate binding domain AB987_3183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3184 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3184 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_3184 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_3187 PF00106 short chain dehydrogenase AB987_3189 PF07690 Major Facilitator Superfamily AB987_3192 PF01425 Amidase AB987_3193 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_3196 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB987_3196 PF00355 Rieske [2Fe-2S] domain AB987_3199 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_3199 PF00175 Oxidoreductase NAD-binding domain AB987_3200 PF01613 Flavin reductase like domain AB987_3201 PF12833 Helix-turn-helix domain AB987_3201 PF02311 AraC-like ligand binding domain AB987_3202 PF01179 Copper amine oxidase, enzyme domain AB987_3202 PF07833 Copper amine oxidase N-terminal domain AB987_3202 PF02727 Copper amine oxidase, N2 domain AB987_3202 PF02728 Copper amine oxidase, N3 domain AB987_3204 PF00171 Aldehyde dehydrogenase family AB987_3205 PF12146 Serine aminopeptidase, S33 AB987_3206 PF00108 Thiolase, N-terminal domain AB987_3206 PF02803 Thiolase, C-terminal domain AB987_3207 PF01144 Coenzyme A transferase AB987_3208 PF01144 Coenzyme A transferase AB987_3209 PF04444 Catechol dioxygenase N terminus AB987_3209 PF00775 Dioxygenase AB987_3210 PF02426 Muconolactone delta-isomerase AB987_3211 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB987_3211 PF13378 Enolase C-terminal domain-like AB987_3212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3212 PF03466 LysR substrate binding domain AB987_3214 PF00392 Bacterial regulatory proteins, gntR family AB987_3214 PF07729 FCD domain AB987_3215 PF00920 Dehydratase family AB987_3216 PF07690 Major Facilitator Superfamily AB987_3217 PF07690 Major Facilitator Superfamily AB987_3219 PF00171 Aldehyde dehydrogenase family AB987_3221 PF13737 Transposase DDE domain AB987_3222 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_3222 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3223 PF00106 short chain dehydrogenase AB987_3225 PF13411 MerR HTH family regulatory protein AB987_3227 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3229 PF12706 Beta-lactamase superfamily domain AB987_3230 PF08359 YsiA-like protein, C-terminal region AB987_3230 PF00440 Bacterial regulatory proteins, tetR family AB987_3232 PF00857 Isochorismatase family AB987_3233 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3233 PF03466 LysR substrate binding domain AB987_3234 PF07995 Glucose / Sorbosone dehydrogenase AB987_3235 PF02254 TrkA-N domain AB987_3235 PF00999 Sodium/hydrogen exchanger family AB987_3237 PF01546 Peptidase family M20/M25/M40 AB987_3237 PF07687 Peptidase dimerisation domain AB987_3240 PF13737 Transposase DDE domain AB987_3246 PF00665 Integrase core domain AB987_3246 PF13276 HTH-like domain AB987_3246 PF13333 Integrase core domain AB987_3247 PF07690 Major Facilitator Superfamily AB987_3248 PF04909 Amidohydrolase AB987_3252 PF08450 SMP-30/Gluconolactonase/LRE-like region AB987_3254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3254 PF03466 LysR substrate binding domain AB987_3257 PF03466 LysR substrate binding domain AB987_3257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3258 PF07883 Cupin domain AB987_3259 PF01494 FAD binding domain AB987_3260 PF13417 Glutathione S-transferase, N-terminal domain AB987_3261 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB987_3262 PF07690 Major Facilitator Superfamily AB987_3264 PF00529 HlyD membrane-fusion protein of T1SS AB987_3264 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB987_3267 PF00171 Aldehyde dehydrogenase family AB987_3268 PF00920 Dehydratase family AB987_3270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3270 PF03466 LysR substrate binding domain AB987_3271 PF01370 NAD dependent epimerase/dehydratase family AB987_3272 PF07690 Major Facilitator Superfamily AB987_3275 PF00005 ABC transporter AB987_3279 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB987_3279 PF14572 Phosphoribosyl synthetase-associated domain AB987_3280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB987_3284 PF13533 Biotin-lipoyl like AB987_3285 PF07690 Major Facilitator Superfamily AB987_3289 PF01975 Survival protein SurE AB987_3291 PF04607 Region found in RelA / SpoT proteins AB987_3291 PF02824 TGS domain AB987_3291 PF13291 ACT domain AB987_3298 PF13737 Transposase DDE domain AB987_3299 PF00005 ABC transporter AB987_3299 PF17755 UvrA DNA-binding domain AB987_3299 PF17760 UvrA interaction domain AB987_3302 PF05973 Phage derived protein Gp49-like (DUF891) AB987_3305 PF13737 Transposase DDE domain AB987_3306 PF13180 PDZ domain AB987_3312 PF00990 Diguanylate cyclase, GGDEF domain AB987_3312 PF07694 5TMR of 5TMR-LYT AB987_3313 PF02080 TrkA-C domain AB987_3313 PF00999 Sodium/hydrogen exchanger family AB987_3313 PF02254 TrkA-N domain AB987_3319 PF10431 C-terminal, D2-small domain, of ClpB protein AB987_3319 PF02861 Clp amino terminal domain, pathogenicity island component AB987_3319 PF17871 AAA lid domain AB987_3319 PF07724 AAA domain (Cdc48 subfamily) AB987_3319 PF00004 ATPase family associated with various cellular activities (AAA) AB987_3322 PF00011 Hsp20/alpha crystallin family AB987_3324 PF13737 Transposase DDE domain AB987_3325 PF00107 Zinc-binding dehydrogenase AB987_3325 PF16884 N-terminal domain of oxidoreductase AB987_3326 PF16925 Tetracyclin repressor-like, C-terminal domain AB987_3326 PF00440 Bacterial regulatory proteins, tetR family AB987_3327 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB987_3329 PF00465 Iron-containing alcohol dehydrogenase AB987_3331 PF00756 Putative esterase AB987_3332 PF08240 Alcohol dehydrogenase GroES-like domain AB987_3332 PF00107 Zinc-binding dehydrogenase AB987_3333 PF02583 Metal-sensitive transcriptional repressor AB987_3334 PF01527 Transposase AB987_3335 PF13333 Integrase core domain AB987_3335 PF13276 HTH-like domain AB987_3335 PF00665 Integrase core domain AB987_3336 PF13276 HTH-like domain AB987_3336 PF00665 Integrase core domain AB987_3336 PF13333 Integrase core domain AB987_3337 PF01381 Helix-turn-helix AB987_3338 PF13737 Transposase DDE domain AB987_3339 PF00296 Luciferase-like monooxygenase AB987_3342 PF00593 TonB dependent receptor AB987_3342 PF07715 TonB-dependent Receptor Plug Domain AB987_3343 PF00005 ABC transporter AB987_3343 PF00664 ABC transporter transmembrane region AB987_3344 PF00664 ABC transporter transmembrane region AB987_3344 PF00005 ABC transporter AB987_3346 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_3346 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_3346 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3347 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB987_3347 PF00005 ABC transporter AB987_3348 PF00005 ABC transporter AB987_3348 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB987_3349 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3349 PF12911 N-terminal TM domain of oligopeptide transport permease C AB987_3350 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3351 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB987_3352 PF00296 Luciferase-like monooxygenase AB987_3355 PF13737 Transposase DDE domain AB987_3357 PF00665 Integrase core domain AB987_3357 PF13333 Integrase core domain AB987_3357 PF13276 HTH-like domain AB987_3360 PF13091 PLD-like domain AB987_3364 PF01244 Membrane dipeptidase (Peptidase family M19) AB987_3365 PF13186 Iron-sulfur cluster-binding domain AB987_3365 PF04055 Radical SAM superfamily AB987_3366 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AB987_3367 PF03070 TENA/THI-4/PQQC family AB987_3368 PF12706 Beta-lactamase superfamily domain AB987_3369 PF08042 PqqA family AB987_3370 PF13089 Polyphosphate kinase N-terminal domain AB987_3370 PF17941 Polyphosphate kinase C-terminal domain 1 AB987_3370 PF13090 Polyphosphate kinase C-terminal domain 2 AB987_3370 PF02503 Polyphosphate kinase middle domain AB987_3371 PF00149 Calcineurin-like phosphoesterase AB987_3374 PF00550 Phosphopantetheine attachment site AB987_3374 PF00857 Isochorismatase family AB987_3375 PF00106 short chain dehydrogenase AB987_3376 PF00005 ABC transporter AB987_3376 PF03459 TOBE domain AB987_3377 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3379 PF03459 TOBE domain AB987_3379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB987_3380 PF00355 Rieske [2Fe-2S] domain AB987_3381 PF00866 Ring hydroxylating beta subunit AB987_3382 PF00970 Oxidoreductase FAD-binding domain AB987_3382 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_3382 PF00175 Oxidoreductase NAD-binding domain AB987_3384 PF14525 AraC-binding-like domain AB987_3384 PF12833 Helix-turn-helix domain AB987_3387 PF01613 Flavin reductase like domain AB987_3392 PF00872 Transposase, Mutator family AB987_3393 PF01738 Dienelactone hydrolase family AB987_3394 PF07690 Major Facilitator Superfamily AB987_3395 PF12833 Helix-turn-helix domain AB987_3395 PF06719 AraC-type transcriptional regulator N-terminus AB987_3400 PF00440 Bacterial regulatory proteins, tetR family AB987_3404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3404 PF03466 LysR substrate binding domain AB987_3405 PF01144 Coenzyme A transferase AB987_3406 PF01144 Coenzyme A transferase AB987_3407 PF02667 Short chain fatty acid transporter AB987_3408 PF00108 Thiolase, N-terminal domain AB987_3408 PF02803 Thiolase, C-terminal domain AB987_3409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3409 PF03466 LysR substrate binding domain AB987_3410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3410 PF03466 LysR substrate binding domain AB987_3413 PF00206 Lyase AB987_3413 PF10415 Fumarase C C-terminus AB987_3414 PF07715 TonB-dependent Receptor Plug Domain AB987_3414 PF00593 TonB dependent receptor AB987_3415 PF00083 Sugar (and other) transporter AB987_3418 PF00005 ABC transporter AB987_3419 PF00005 ABC transporter AB987_3420 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3421 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB987_3426 PF02525 Flavodoxin-like fold AB987_3427 PF01638 HxlR-like helix-turn-helix AB987_3428 PF12833 Helix-turn-helix domain AB987_3428 PF06445 GyrI-like small molecule binding domain AB987_3431 PF01925 Sulfite exporter TauE/SafE AB987_3432 PF00753 Metallo-beta-lactamase superfamily AB987_3432 PF04273 Putative phosphatase (DUF442) AB987_3433 PF00753 Metallo-beta-lactamase superfamily AB987_3433 PF04273 Putative phosphatase (DUF442) AB987_3434 PF02954 Bacterial regulatory protein, Fis family AB987_3434 PF00072 Response regulator receiver domain AB987_3434 PF00158 Sigma-54 interaction domain AB987_3435 PF01062 Bestrophin, RFP-TM, chloride channel AB987_3436 PF08240 Alcohol dehydrogenase GroES-like domain AB987_3436 PF00107 Zinc-binding dehydrogenase AB987_3437 PF00106 short chain dehydrogenase AB987_3438 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3438 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB987_3439 PF00364 Biotin-requiring enzyme AB987_3439 PF02817 e3 binding domain AB987_3439 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB987_3440 PF02779 Transketolase, pyrimidine binding domain AB987_3440 PF02780 Transketolase, C-terminal domain AB987_3441 PF00676 Dehydrogenase E1 component AB987_3443 PF04055 Radical SAM superfamily AB987_3446 PF08448 PAS fold AB987_3446 PF00990 Diguanylate cyclase, GGDEF domain AB987_3447 PF01264 Chorismate synthase AB987_3448 PF05175 Methyltransferase small domain AB987_3449 PF00291 Pyridoxal-phosphate dependent enzyme AB987_3451 PF17862 AAA+ lid domain AB987_3451 PF00004 ATPase family associated with various cellular activities (AAA) AB987_3451 PF01434 Peptidase family M41 AB987_3453 PF05166 YcgL domain AB987_3458 PF13936 Helix-turn-helix domain AB987_3458 PF00665 Integrase core domain AB987_3459 PF02132 RecR protein AB987_3459 PF13662 Toprim domain AB987_3460 PF02575 YbaB/EbfC DNA-binding family AB987_3462 PF01053 Cys/Met metabolism PLP-dependent enzyme AB987_3463 PF00561 alpha/beta hydrolase fold AB987_3464 PF08241 Methyltransferase domain AB987_3470 PF13737 Transposase DDE domain AB987_3471 PF13359 DDE superfamily endonuclease AB987_3471 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_3472 PF13359 DDE superfamily endonuclease AB987_3472 PF13613 Helix-turn-helix of DDE superfamily endonuclease AB987_3474 PF01230 HIT domain AB987_3481 PF00005 ABC transporter AB987_3483 PF02684 Lipid-A-disaccharide synthetase AB987_3484 PF00593 TonB dependent receptor AB987_3484 PF07715 TonB-dependent Receptor Plug Domain AB987_3487 PF01925 Sulfite exporter TauE/SafE AB987_3488 PF00793 DAHP synthetase I family AB987_3489 PF02654 Cobalamin-5-phosphate synthase AB987_3491 PF00300 Histidine phosphatase superfamily (branch 1) AB987_3492 PF02277 Phosphoribosyltransferase AB987_3493 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AB987_3502 PF00593 TonB dependent receptor AB987_3502 PF07715 TonB-dependent Receptor Plug Domain AB987_3503 PF03737 Aldolase/RraA AB987_3505 PF06276 Ferric iron reductase FhuF-like transporter AB987_3505 PF04183 IucA / IucC family AB987_3506 PF06276 Ferric iron reductase FhuF-like transporter AB987_3506 PF04183 IucA / IucC family AB987_3507 PF07690 Major Facilitator Superfamily AB987_3508 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB987_3509 PF06276 Ferric iron reductase FhuF-like transporter AB987_3509 PF04183 IucA / IucC family AB987_3510 PF06276 Ferric iron reductase FhuF-like transporter AB987_3510 PF04183 IucA / IucC family AB987_3511 PF04073 Aminoacyl-tRNA editing domain AB987_3513 PF03109 ABC1 family AB987_3514 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_3514 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3514 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_3515 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_3515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB987_3515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3516 PF00487 Fatty acid desaturase AB987_3517 PF12833 Helix-turn-helix domain AB987_3517 PF12852 Cupin AB987_3518 PF09312 SurA N-terminal domain AB987_3518 PF00639 PPIC-type PPIASE domain AB987_3519 PF00216 Bacterial DNA-binding protein AB987_3522 PF02082 Transcriptional regulator AB987_3523 PF00266 Aminotransferase class-V AB987_3524 PF01592 NifU-like N terminal domain AB987_3525 PF01521 Iron-sulphur cluster biosynthesis AB987_3526 PF07743 HSCB C-terminal oligomerisation domain AB987_3526 PF00226 DnaJ domain AB987_3527 PF00012 Hsp70 protein AB987_3528 PF00111 2Fe-2S iron-sulfur cluster binding domain AB987_3529 PF00211 Adenylate and Guanylate cyclase catalytic domain AB987_3531 PF03461 TRCF domain AB987_3531 PF17757 UvrB interaction domain AB987_3531 PF02559 CarD-like/TRCF domain AB987_3531 PF00271 Helicase conserved C-terminal domain AB987_3531 PF00270 DEAD/DEAH box helicase AB987_3535 PF03737 Aldolase/RraA AB987_3536 PF13460 NAD(P)H-binding AB987_3537 PF01649 Ribosomal protein S20 AB987_3539 PF00459 Inositol monophosphatase family AB987_3541 PF13276 HTH-like domain AB987_3541 PF00665 Integrase core domain AB987_3541 PF13333 Integrase core domain AB987_3545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB987_3545 PF00005 ABC transporter AB987_3546 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3547 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3548 PF01432 Peptidase family M3 AB987_3551 PF07715 TonB-dependent Receptor Plug Domain AB987_3551 PF00593 TonB dependent receptor AB987_3552 PF03544 Gram-negative bacterial TonB protein C-terminal AB987_3553 PF01618 MotA/TolQ/ExbB proton channel family AB987_3554 PF02472 Biopolymer transport protein ExbD/TolR AB987_3555 PF02472 Biopolymer transport protein ExbD/TolR AB987_3557 PF01274 Malate synthase AB987_3558 PF03969 AFG1-like ATPase AB987_3562 PF00743 Flavin-binding monooxygenase-like AB987_3563 PF00743 Flavin-binding monooxygenase-like AB987_3564 PF00872 Transposase, Mutator family AB987_3566 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB987_3568 PF00216 Bacterial DNA-binding protein AB987_3569 PF00575 S1 RNA binding domain AB987_3570 PF02224 Cytidylate kinase AB987_3573 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB987_3575 PF03167 Uracil DNA glycosylase superfamily AB987_3577 PF03934 Type II secretion system (T2SS), protein K AB987_3578 PF07963 Prokaryotic N-terminal methylation motif AB987_3578 PF11612 Type II secretion system (T2SS), protein J AB987_3579 PF07963 Prokaryotic N-terminal methylation motif AB987_3579 PF02501 Type II secretion system (T2SS), protein I AB987_3582 PF01026 TatD related DNase AB987_3584 PF09115 DNA polymerase III, delta subunit, C terminal AB987_3585 PF02348 Cytidylyltransferase AB987_3586 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AB987_3587 PF00005 ABC transporter AB987_3587 PF00664 ABC transporter transmembrane region AB987_3589 PF01618 MotA/TolQ/ExbB proton channel family AB987_3590 PF02195 ParB-like nuclease domain AB987_3590 PF17762 HTH domain found in ParB protein AB987_3591 PF13614 AAA domain AB987_3592 PF02527 rRNA small subunit methyltransferase G AB987_3593 PF00483 Nucleotidyl transferase AB987_3594 PF01636 Phosphotransferase enzyme family AB987_3595 PF04453 LPS transport system D AB987_3595 PF03968 OstA-like protein AB987_3596 PF00639 PPIC-type PPIASE domain AB987_3596 PF09312 SurA N-terminal domain AB987_3597 PF01116 Fructose-bisphosphate aldolase class-II AB987_3599 PF00162 Phosphoglycerate kinase AB987_3601 PF02545 Maf-like protein AB987_3602 PF08007 Cupin superfamily protein AB987_3605 PF00375 Sodium:dicarboxylate symporter family AB987_3606 PF06912 Protein of unknown function (DUF1275) AB987_3607 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AB987_3608 PF00664 ABC transporter transmembrane region AB987_3608 PF00005 ABC transporter AB987_3610 PF12833 Helix-turn-helix domain AB987_3610 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB987_3611 PF01597 Glycine cleavage H-protein AB987_3612 PF02146 Sir2 family AB987_3613 PF00474 Sodium:solute symporter family AB987_3614 PF01037 Lrp/AsnC ligand binding domain AB987_3615 PF14850 DNA-binding domain of Proline dehydrogenase AB987_3615 PF01619 Proline dehydrogenase AB987_3615 PF00171 Aldehyde dehydrogenase family AB987_3615 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AB987_3616 PF04229 GrpB protein AB987_3617 PF05958 tRNA (Uracil-5-)-methyltransferase AB987_3619 PF09992 Phosphodiester glycosidase AB987_3621 PF04264 YceI-like domain AB987_3623 PF02779 Transketolase, pyrimidine binding domain AB987_3623 PF00456 Transketolase, thiamine diphosphate binding domain AB987_3623 PF02780 Transketolase, C-terminal domain AB987_3625 PF02773 S-adenosylmethionine synthetase, C-terminal domain AB987_3625 PF00438 S-adenosylmethionine synthetase, N-terminal domain AB987_3625 PF02772 S-adenosylmethionine synthetase, central domain AB987_3629 PF00905 Penicillin binding protein transpeptidase domain AB987_3633 PF02075 Crossover junction endodeoxyribonuclease RuvC AB987_3634 PF01256 Carbohydrate kinase AB987_3634 PF03853 YjeF-related protein N-terminus AB987_3635 PF08331 Domain of unknown function (DUF1730) AB987_3636 PF04055 Radical SAM superfamily AB987_3636 PF06968 Biotin and Thiamin Synthesis associated domain AB987_3643 PF13936 Helix-turn-helix domain AB987_3643 PF00665 Integrase core domain AB987_3644 PF00440 Bacterial regulatory proteins, tetR family AB987_3648 PF01709 Transcriptional regulator AB987_3649 PF01037 Lrp/AsnC ligand binding domain AB987_3651 PF00005 ABC transporter AB987_3652 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3653 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3657 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3657 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_3659 PF00296 Luciferase-like monooxygenase AB987_3660 PF03180 NLPA lipoprotein AB987_3662 PF03180 NLPA lipoprotein AB987_3663 PF00005 ABC transporter AB987_3663 PF09383 NIL domain AB987_3664 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3665 PF01926 50S ribosome-binding GTPase AB987_3665 PF06071 Protein of unknown function (DUF933) AB987_3670 PF03591 AzlC protein AB987_3671 PF05437 Branched-chain amino acid transport protein (AzlD) AB987_3673 PF02222 ATP-grasp domain AB987_3674 PF01966 HD domain AB987_3674 PF01909 Nucleotidyltransferase domain AB987_3674 PF08335 GlnD PII-uridylyltransferase AB987_3675 PF00155 Aminotransferase class I and II AB987_3677 PF12833 Helix-turn-helix domain AB987_3677 PF12852 Cupin AB987_3678 PF00255 Glutathione peroxidase AB987_3679 PF01641 SelR domain AB987_3680 PF00155 Aminotransferase class I and II AB987_3681 PF00375 Sodium:dicarboxylate symporter family AB987_3682 PF17763 Glutaminase/Asparaginase C-terminal domain AB987_3682 PF00710 Asparaginase, N-terminal AB987_3683 PF02811 PHP domain AB987_3683 PF14579 Helix-hairpin-helix motif AB987_3683 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB987_3683 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB987_3683 PF01336 OB-fold nucleic acid binding domain AB987_3684 PF00588 SpoU rRNA Methylase family AB987_3685 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_3688 PF13192 Thioredoxin domain AB987_3688 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB987_3691 PF03466 LysR substrate binding domain AB987_3691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3692 PF01758 Sodium Bile acid symporter family AB987_3693 PF01022 Bacterial regulatory protein, arsR family AB987_3694 PF03960 ArsC family AB987_3696 PF13382 Adenine deaminase C-terminal domain AB987_3696 PF01979 Amidohydrolase family AB987_3698 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3698 PF03466 LysR substrate binding domain AB987_3699 PF00665 Integrase core domain AB987_3699 PF13936 Helix-turn-helix domain AB987_3700 PF13737 Transposase DDE domain AB987_3702 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB987_3703 PF01177 Asp/Glu/Hydantoin racemase AB987_3704 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AB987_3705 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3706 PF00005 ABC transporter AB987_3707 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB987_3709 PF00083 Sugar (and other) transporter AB987_3710 PF00296 Luciferase-like monooxygenase AB987_3711 PF02770 Acyl-CoA dehydrogenase, middle domain AB987_3711 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB987_3711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB987_3714 PF01654 Cytochrome bd terminal oxidase subunit I AB987_3715 PF02322 Cytochrome bd terminal oxidase subunit II AB987_3717 PF00392 Bacterial regulatory proteins, gntR family AB987_3717 PF00155 Aminotransferase class I and II AB987_3718 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3718 PF03466 LysR substrate binding domain AB987_3721 PF00698 Acyl transferase domain AB987_3722 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AB987_3724 PF01039 Carboxyl transferase domain AB987_3725 PF06857 Malonate decarboxylase delta subunit (MdcD) AB987_3726 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB987_3727 PF16957 Malonate decarboxylase, alpha subunit, transporter AB987_3728 PF03466 LysR substrate binding domain AB987_3728 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3730 PF07690 Major Facilitator Superfamily AB987_3733 PF00155 Aminotransferase class I and II AB987_3733 PF00392 Bacterial regulatory proteins, gntR family AB987_3734 PF04172 LrgB-like family AB987_3735 PF03788 LrgA family AB987_3736 PF03466 LysR substrate binding domain AB987_3736 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3737 PF14834 Glutathione S-transferase, C-terminal domain AB987_3737 PF02798 Glutathione S-transferase, N-terminal domain AB987_3738 PF02798 Glutathione S-transferase, N-terminal domain AB987_3739 PF03466 LysR substrate binding domain AB987_3739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3741 PF00581 Rhodanese-like domain AB987_3742 PF00132 Bacterial transferase hexapeptide (six repeats) AB987_3745 PF00266 Aminotransferase class-V AB987_3746 PF01810 LysE type translocator AB987_3747 PF03466 LysR substrate binding domain AB987_3747 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3749 PF13737 Transposase DDE domain AB987_3750 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB987_3751 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB987_3752 PF00005 ABC transporter AB987_3753 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3754 PF00528 Binding-protein-dependent transport system inner membrane component AB987_3756 PF07690 Major Facilitator Superfamily AB987_3757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3757 PF03466 LysR substrate binding domain AB987_3759 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AB987_3760 PF00072 Response regulator receiver domain AB987_3761 PF09308 LuxQ, periplasmic AB987_3761 PF00072 Response regulator receiver domain AB987_3761 PF00512 His Kinase A (phospho-acceptor) domain AB987_3761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB987_3763 PF01037 Lrp/AsnC ligand binding domain AB987_3763 PF13404 AsnC-type helix-turn-helix domain AB987_3765 PF00717 Peptidase S24-like AB987_3767 PF13737 Transposase DDE domain AB987_3771 PF06628 Catalase-related immune-responsive AB987_3771 PF00199 Catalase AB987_3771 PF18011 C-terminal domain found in long catalases AB987_3773 PF00994 Probable molybdopterin binding domain AB987_3773 PF18146 Damage-inducible protein CinA KH domain AB987_3773 PF02464 Competence-damaged protein AB987_3780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB987_3780 PF03466 LysR substrate binding domain AB987_3787 PF06628 Catalase-related immune-responsive AB987_3787 PF00199 Catalase AB987_3792 PF00239 Resolvase, N terminal domain AB987_3792 PF02796 Helix-turn-helix domain of resolvase AB987_3805 PF03389 MobA/MobL family AB987_3809 PF03471 Transporter associated domain AB987_3809 PF03741 Integral membrane protein TerC family AB987_3810 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AB987_3813 PF00665 Integrase core domain AB987_3813 PF13333 Integrase core domain AB987_3813 PF13276 HTH-like domain