AB987_0006 SM00878 Biotin carboxylase C-terminal domain AB987_0017 SM00382 ATPases associated with a variety of cellular activities AB987_0020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0020 SM00866 AB987_0020 AB987_0022 SM00346 helix_turn_helix isocitrate lyase regulation AB987_0034 SM01060 AB987_0034 AB987_0060 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0060 SM00895 AB987_0060 AB987_0062 SM01130 AB987_0062 AB987_0068 SM00382 ATPases associated with a variety of cellular activities AB987_0075 SM00796 Allophanate hydrolase subunit 1 AB987_0075 SM00797 Allophanate hydrolase subunit 2 AB987_0075 SM00878 Biotin carboxylase C-terminal domain AB987_0079 SM00829 Enoylreductase AB987_0099 SM00878 Biotin carboxylase C-terminal domain AB987_0100 SM00796 Allophanate hydrolase subunit 1 AB987_0100 SM00797 Allophanate hydrolase subunit 2 AB987_0115 SM00422 helix_turn_helix, mercury resistance AB987_0119 SM00052 Putative diguanylate phosphodiesterase AB987_0123 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB987_0123 SM00534 ATPase domain of DNA mismatch repair MUTS family AB987_0132 SM00382 ATPases associated with a variety of cellular activities AB987_0134 SM00382 ATPases associated with a variety of cellular activities AB987_0138 SM00116 Domain in cystathionine beta-synthase and other proteins. AB987_0139 SM00840 AB987_0139 AB987_0166 SM00507 HNH nucleases AB987_0169 SM00382 ATPases associated with a variety of cellular activities AB987_0202 SM00357 Cold shock protein domain AB987_0207 SM00530 Helix-turn-helix XRE-family like proteins AB987_0217 SM00422 helix_turn_helix, mercury resistance AB987_0221 SM00382 ATPases associated with a variety of cellular activities AB987_0221 SM00989 AB987_0221 AB987_0241 SM00382 ATPases associated with a variety of cellular activities AB987_0241 SM00487 DEAD-like helicases superfamily AB987_0241 SM00490 helicase superfamily c-terminal domain AB987_0241 SM00847 Helicase associated domain (HA2) Add an annotation AB987_0257 SM00981 AB987_0257 AB987_0260 SM00382 ATPases associated with a variety of cellular activities AB987_0260 SM01086 C-terminal, D2-small domain, of ClpB protein AB987_0264 SM00100 Cyclic nucleotide-monophosphate binding domain AB987_0264 SM00419 helix_turn_helix, cAMP Regulatory protein AB987_0268 SM00788 Adenylosuccinate synthetase AB987_0270 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB987_0271 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB987_0278 SM00060 Fibronectin type 3 domain AB987_0313 SM00382 ATPases associated with a variety of cellular activities AB987_0320 SM00530 Helix-turn-helix XRE-family like proteins AB987_0351 SM00342 helix_turn_helix, arabinose operon control protein AB987_0365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0365 SM00895 AB987_0365 AB987_0366 SM00347 helix_turn_helix multiple antibiotic resistance protein AB987_0376 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0376 SM00895 AB987_0376 AB987_0378 SM01130 AB987_0378 AB987_0379 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB987_0381 SM00858 AB987_0381 AB987_0383 SM00342 helix_turn_helix, arabinose operon control protein AB987_0390 SM00344 helix_turn_helix ASNC type AB987_0393 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0393 SM00895 AB987_0393 AB987_0408 SM00267 diguanylate cyclase AB987_0410 SM00479 AB987_0410 AB987_0414 SM00382 ATPases associated with a variety of cellular activities AB987_0418 SM00257 Lysin motif AB987_0419 SM00479 AB987_0419 AB987_0431 SM00422 helix_turn_helix, mercury resistance AB987_0436 SM01011 Aminopeptidase P, N-terminal domain AB987_0446 SM00382 ATPases associated with a variety of cellular activities AB987_0446 SM00464 Found in ATP-dependent protease La (LON) AB987_0450 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB987_0452 SM00478 endonuclease III AB987_0463 SM00988 UreE urease accessory protein, N-terminal domain AB987_0473 SM01091 Transporter associated domain AB987_0493 SM00382 ATPases associated with a variety of cellular activities AB987_0495 SM00947 Carbonic anhydrase AB987_0513 SM01018 B12 binding domain AB987_0516 SM00487 DEAD-like helicases superfamily AB987_0518 SM00861 Transketolase, pyrimidine binding domain AB987_0521 SM00822 AB987_0521 AB987_0526 SM00342 helix_turn_helix, arabinose operon control protein AB987_0533 SM00346 helix_turn_helix isocitrate lyase regulation AB987_0541 SM01322 AB987_0541 AB987_0584 SM01040 BRO family, N-terminal domain AB987_0593 SM01004 Delta-aminolevulinic acid dehydratase AB987_0602 SM00382 ATPases associated with a variety of cellular activities AB987_0616 SM00563 Phosphate acyltransferases AB987_0623 SM00843 AB987_0623 AB987_0632 SM00838 Elongation factor G C-terminus AB987_0632 SM00889 Elongation factor G, domain IV AB987_0636 SM00825 Beta-ketoacyl synthase AB987_0648 SM01329 AB987_0648 AB987_0657 SM00363 S4 RNA-binding domain AB987_0659 SM00400 zinc finger AB987_0659 SM00493 AB987_0659 AB987_0661 SM00028 Tetratricopeptide repeats AB987_0668 SM01400 AB987_0668 AB987_0677 SM00257 Lysin motif AB987_0679 SM00822 AB987_0679 AB987_0680 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB987_0687 SM00363 S4 RNA-binding domain AB987_0697 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB987_0697 SM00292 breast cancer carboxy-terminal domain AB987_0697 SM00532 Ligase N family AB987_0698 SM00771 ZipA, C-terminal domain (FtsZ-binding) AB987_0700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_0704 SM00382 ATPases associated with a variety of cellular activities AB987_0704 SM00962 SRP54-type protein, GTPase domain AB987_0704 SM00963 SRP54-type protein, helical bundle domain AB987_0734 SM00357 Cold shock protein domain AB987_0743 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB987_0743 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB987_0744 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB987_0749 SM00267 diguanylate cyclase AB987_0751 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB987_0751 SM00387 Histidine kinase-like ATPases AB987_0751 SM00388 His Kinase A (phosphoacceptor) domain AB987_0752 SM00448 cheY-homologous receiver domain AB987_0752 SM00862 Transcriptional regulatory protein, C terminal AB987_0757 SM00903 Flavin reductase like domain AB987_0812 SM00331 Sigma factor PP2C-like phosphatases AB987_0816 SM00347 helix_turn_helix multiple antibiotic resistance protein AB987_0818 SM00382 ATPases associated with a variety of cellular activities AB987_0822 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB987_0822 SM00474 3'-5' exonuclease AB987_0822 SM00475 5'-3' exonuclease AB987_0822 SM00482 DNA polymerase A domain AB987_0825 SM00977 TilS substrate C-terminal domain AB987_0829 SM00357 Cold shock protein domain AB987_0829 SM00382 ATPases associated with a variety of cellular activities AB987_0829 SM00959 Rho termination factor, N-terminal domain AB987_0831 SM00411 bacterial (prokaryotic) histone like domain AB987_0832 SM00873 B3/4 domain AB987_0832 SM00874 tRNA synthetase B5 domain AB987_0832 SM00896 Ferredoxin-fold anticodon binding domain AB987_0843 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB987_0852 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB987_0855 SM00954 Region found in RelA / SpoT proteins AB987_0859 SM00073 Histidine Phosphotransfer domain AB987_0859 SM00387 Histidine kinase-like ATPases AB987_0859 SM00388 His Kinase A (phosphoacceptor) domain AB987_0859 SM00448 cheY-homologous receiver domain AB987_0868 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB987_0868 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB987_0881 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB987_0884 SM00899 AB987_0884 AB987_0894 SM00448 cheY-homologous receiver domain AB987_0894 SM00862 Transcriptional regulatory protein, C terminal AB987_0895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB987_0895 SM00387 Histidine kinase-like ATPases AB987_0895 SM00388 His Kinase A (phosphoacceptor) domain AB987_0896 SM00746 metallochaperone-like domain AB987_0903 SM00271 DnaJ molecular chaperone homology domain AB987_0925 SM00843 AB987_0925 AB987_0926 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB987_0946 SM00052 Putative diguanylate phosphodiesterase AB987_0946 SM00267 diguanylate cyclase AB987_0955 SM00382 ATPases associated with a variety of cellular activities AB987_0959 SM00479 AB987_0959 AB987_0961 SM00450 Rhodanese Homology Domain AB987_0966 SM00564 beta-propeller repeat AB987_0971 SM00028 Tetratricopeptide repeats AB987_0973 SM00562 AB987_0973 AB987_0975 SM00014 Acid phosphatase homologues AB987_0977 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_0977 SM00245 tail specific protease AB987_0993 SM00382 ATPases associated with a variety of cellular activities AB987_0993 SM00994 ClpX C4-type zinc finger AB987_0993 SM01086 C-terminal, D2-small domain, of ClpB protein AB987_0997 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB987_0998 SM00917 LeuA allosteric (dimerisation) domain AB987_1001 SM00671 Sel1-like repeats. AB987_1029 SM00360 RNA recognition motif AB987_1033 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB987_1033 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB987_1033 SM00493 AB987_1033 AB987_1036 SM00829 Enoylreductase AB987_1038 SM00382 ATPases associated with a variety of cellular activities AB987_1045 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB987_1048 SM00870 AB987_1048 AB987_1050 SM00342 helix_turn_helix, arabinose operon control protein AB987_1051 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1054 SM01329 AB987_1054 AB987_1062 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB987_1072 SM00363 S4 RNA-binding domain AB987_1074 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1080 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_1104 SM00849 Metallo-beta-lactamase superfamily AB987_1112 SM00116 Domain in cystathionine beta-synthase and other proteins. AB987_1112 SM01091 Transporter associated domain AB987_1118 SM00487 DEAD-like helicases superfamily AB987_1118 SM00490 helicase superfamily c-terminal domain AB987_1122 SM00271 DnaJ molecular chaperone homology domain AB987_1125 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1125 SM00322 K homology RNA-binding domain AB987_1126 SM01387 AB987_1126 AB987_1128 SM00382 ATPases associated with a variety of cellular activities AB987_1150 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1162 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB987_1164 SM00028 Tetratricopeptide repeats AB987_1167 SM00732 Likely ribonuclease with RNase H fold. AB987_1171 SM00346 helix_turn_helix isocitrate lyase regulation AB987_1173 SM00342 helix_turn_helix, arabinose operon control protein AB987_1176 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB987_1176 SM00465 GIY-YIG type nucleases (URI domain) AB987_1187 SM00422 helix_turn_helix, mercury resistance AB987_1192 SM00387 Histidine kinase-like ATPases AB987_1203 SM00663 RNA polymerase I subunit A N-terminus AB987_1208 SM00649 Ribosomal protein L11/L12 AB987_1209 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB987_1209 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB987_1219 SM00240 Forkhead associated domain AB987_1221 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_1223 SM00528 Domain in histone-like proteins of HNS family AB987_1230 SM00448 cheY-homologous receiver domain AB987_1230 SM00850 LytTr DNA-binding domain AB987_1248 SM00899 AB987_1248 AB987_1254 SM00421 helix_turn_helix, Lux Regulon AB987_1254 SM00448 cheY-homologous receiver domain AB987_1255 SM00387 Histidine kinase-like ATPases AB987_1255 SM00388 His Kinase A (phosphoacceptor) domain AB987_1256 SM00382 ATPases associated with a variety of cellular activities AB987_1256 SM00448 cheY-homologous receiver domain AB987_1257 SM00245 tail specific protease AB987_1270 SM00938 Nitrogen regulatory protein P-II AB987_1272 SM00382 ATPases associated with a variety of cellular activities AB987_1273 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1274 SM01007 Class II Aldolase and Adducin N-terminal domain AB987_1275 SM01130 AB987_1275 AB987_1283 SM00434 DNA Topoisomerase IV AB987_1287 SM01091 Transporter associated domain AB987_1291 SM00641 Glycosyl hydrolases family 25 AB987_1293 SM00448 cheY-homologous receiver domain AB987_1293 SM00862 Transcriptional regulatory protein, C terminal AB987_1294 SM00387 Histidine kinase-like ATPases AB987_1294 SM00388 His Kinase A (phosphoacceptor) domain AB987_1299 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_1301 SM00422 helix_turn_helix, mercury resistance AB987_1327 SM00342 helix_turn_helix, arabinose operon control protein AB987_1331 SM00382 ATPases associated with a variety of cellular activities AB987_1341 SM00382 ATPases associated with a variety of cellular activities AB987_1345 SM00919 Malic enzyme, NAD binding domain AB987_1345 SM01274 AB987_1345 AB987_1346 SM00836 DALR anticodon binding domain AB987_1346 SM01016 Arginyl tRNA synthetase N terminal dom AB987_1381 SM01005 Alanine racemase, C-terminal domain AB987_1383 SM00344 helix_turn_helix ASNC type AB987_1398 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1398 SM00895 AB987_1398 AB987_1402 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1402 SM00895 AB987_1402 AB987_1408 SM00984 UDP binding domain AB987_1422 SM00984 UDP binding domain AB987_1424 SM00226 Low molecular weight phosphatase family AB987_1429 SM00644 AB987_1429 AB987_1446 SM00062 Bacterial periplasmic substrate-binding proteins AB987_1447 SM00062 Bacterial periplasmic substrate-binding proteins AB987_1450 SM00382 ATPases associated with a variety of cellular activities AB987_1454 SM00904 Riboflavin kinase AB987_1459 SM00248 ankyrin repeats AB987_1474 SM00382 ATPases associated with a variety of cellular activities AB987_1477 SM00387 Histidine kinase-like ATPases AB987_1477 SM00433 TopoisomeraseII AB987_1479 SM00480 DNA polymerase III beta subunit AB987_1480 SM00382 ATPases associated with a variety of cellular activities AB987_1480 SM00760 Bacterial dnaA protein helix-turn-helix domain AB987_1483 SM01234 AB987_1483 AB987_1497 SM00014 Acid phosphatase homologues AB987_1503 SM01001 AIR carboxylase AB987_1507 SM00235 Zinc-dependent metalloprotease AB987_1508 SM00235 Zinc-dependent metalloprotease AB987_1542 SM00271 DnaJ molecular chaperone homology domain AB987_1551 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1552 SM00829 Enoylreductase AB987_1556 SM00478 endonuclease III AB987_1556 SM00525 AB987_1556 AB987_1562 SM00382 ATPases associated with a variety of cellular activities AB987_1567 SM01130 AB987_1567 AB987_1574 SM00346 helix_turn_helix isocitrate lyase regulation AB987_1580 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB987_1584 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1584 SM00866 AB987_1584 AB987_1614 SM00450 Rhodanese Homology Domain AB987_1617 SM00387 Histidine kinase-like ATPases AB987_1617 SM00388 His Kinase A (phosphoacceptor) domain AB987_1618 SM00448 cheY-homologous receiver domain AB987_1618 SM00862 Transcriptional regulatory protein, C terminal AB987_1632 SM00387 Histidine kinase-like ATPases AB987_1632 SM00433 TopoisomeraseII AB987_1645 SM00267 diguanylate cyclase AB987_1659 SM00842 Cell division protein FtsA AB987_1660 SM00864 Tubulin/FtsZ family, GTPase domain AB987_1660 SM00865 Tubulin/FtsZ family, C-terminal domain AB987_1669 SM00849 Metallo-beta-lactamase superfamily AB987_1671 SM00116 Domain in cystathionine beta-synthase and other proteins. AB987_1671 SM01240 AB987_1671 AB987_1676 SM00937 AB987_1676 AB987_1677 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB987_1690 SM00421 helix_turn_helix, Lux Regulon AB987_1690 SM00448 cheY-homologous receiver domain AB987_1692 SM00387 Histidine kinase-like ATPases AB987_1692 SM00388 His Kinase A (phosphoacceptor) domain AB987_1692 SM00448 cheY-homologous receiver domain AB987_1698 SM00267 diguanylate cyclase AB987_1701 SM00829 Enoylreductase AB987_1710 SM00530 Helix-turn-helix XRE-family like proteins AB987_1712 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_1726 SM00487 DEAD-like helicases superfamily AB987_1734 SM00530 Helix-turn-helix XRE-family like proteins AB987_1735 SM00530 Helix-turn-helix XRE-family like proteins AB987_1754 SM00507 HNH nucleases AB987_1755 SM00487 DEAD-like helicases superfamily AB987_1755 SM00490 helicase superfamily c-terminal domain AB987_1766 SM00477 DNA/RNA non-specific endonuclease AB987_1766 SM00892 DNA/RNA non-specific endonuclease AB987_1771 SM00342 helix_turn_helix, arabinose operon control protein AB987_1775 SM00357 Cold shock protein domain AB987_1779 SM00530 Helix-turn-helix XRE-family like proteins AB987_1783 SM00474 3'-5' exonuclease AB987_1792 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB987_1792 SM00387 Histidine kinase-like ATPases AB987_1792 SM00388 His Kinase A (phosphoacceptor) domain AB987_1793 SM00448 cheY-homologous receiver domain AB987_1793 SM00862 Transcriptional regulatory protein, C terminal AB987_1794 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1794 SM00732 Likely ribonuclease with RNase H fold. AB987_1795 SM00947 Carbonic anhydrase AB987_1798 SM00382 ATPases associated with a variety of cellular activities AB987_1799 SM00671 Sel1-like repeats. AB987_1829 SM00842 Cell division protein FtsA AB987_1833 SM00965 Secretin and TonB N terminus short domain AB987_1849 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB987_1849 SM00954 Region found in RelA / SpoT proteins AB987_1850 SM01409 AB987_1850 AB987_1851 SM00072 Guanylate kinase homologues. AB987_1890 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB987_1911 SM00116 Domain in cystathionine beta-synthase and other proteins. AB987_1919 SM00861 Transketolase, pyrimidine binding domain AB987_1921 SM00487 DEAD-like helicases superfamily AB987_1921 SM00490 helicase superfamily c-terminal domain AB987_1923 SM00382 ATPases associated with a variety of cellular activities AB987_1933 SM00487 DEAD-like helicases superfamily AB987_1933 SM00490 helicase superfamily c-terminal domain AB987_1936 SM00563 Phosphate acyltransferases AB987_1946 SM01403 AB987_1946 AB987_1950 SM01382 AB987_1950 AB987_1950 SM01383 AB987_1950 AB987_1953 SM00322 K homology RNA-binding domain AB987_1957 SM01374 AB987_1957 AB987_1958 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB987_1971 SM00363 S4 RNA-binding domain AB987_1971 SM01390 AB987_1971 AB987_1972 SM00662 RNA polymerases D AB987_1984 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_1984 SM00955 AB987_1984 AB987_1994 SM00342 helix_turn_helix, arabinose operon control protein AB987_2004 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_2010 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB987_2031 SM00878 Biotin carboxylase C-terminal domain AB987_2038 SM00650 Ribosomal RNA adenine dimethylases AB987_2044 SM00563 Phosphate acyltransferases AB987_2045 SM00155 Phospholipase D. Active site motifs. AB987_2048 SM00267 diguanylate cyclase AB987_2065 SM00450 Rhodanese Homology Domain AB987_2070 SM00481 DNA polymerase alpha chain like domain AB987_2076 SM01323 AB987_2076 AB987_2082 SM00387 Histidine kinase-like ATPases AB987_2082 SM00388 His Kinase A (phosphoacceptor) domain AB987_2107 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB987_2107 SM00387 Histidine kinase-like ATPases AB987_2107 SM00388 His Kinase A (phosphoacceptor) domain AB987_2108 SM00448 cheY-homologous receiver domain AB987_2108 SM00862 Transcriptional regulatory protein, C terminal AB987_2120 SM00342 helix_turn_helix, arabinose operon control protein AB987_2127 SM00849 Metallo-beta-lactamase superfamily AB987_2129 SM00957 SecA DEAD-like domain AB987_2129 SM00958 SecA preprotein cross-linking domain AB987_2140 SM00342 helix_turn_helix, arabinose operon control protein AB987_2144 SM00564 beta-propeller repeat AB987_2157 SM00838 Elongation factor G C-terminus AB987_2161 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB987_2161 SM01232 AB987_2161 AB987_2166 SM00671 Sel1-like repeats. AB987_2177 SM00448 cheY-homologous receiver domain AB987_2178 SM00448 cheY-homologous receiver domain AB987_2179 SM00260 Two component signalling adaptor domain AB987_2180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB987_2181 SM00073 Histidine Phosphotransfer domain AB987_2181 SM00260 Two component signalling adaptor domain AB987_2181 SM00387 Histidine kinase-like ATPases AB987_2181 SM00448 cheY-homologous receiver domain AB987_2181 SM01231 AB987_2181 AB987_2211 SM00845 GatB domain AB987_2218 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_2225 SM00342 helix_turn_helix, arabinose operon control protein AB987_2229 SM00342 helix_turn_helix, arabinose operon control protein AB987_2230 SM00829 Enoylreductase AB987_2246 SM00244 prohibitin homologues AB987_2249 SM00563 Phosphate acyltransferases AB987_2253 SM00448 cheY-homologous receiver domain AB987_2253 SM00862 Transcriptional regulatory protein, C terminal AB987_2254 SM00387 Histidine kinase-like ATPases AB987_2254 SM00388 His Kinase A (phosphoacceptor) domain AB987_2264 SM00822 AB987_2264 AB987_2271 SM00014 Acid phosphatase homologues AB987_2294 SM00450 Rhodanese Homology Domain AB987_2302 SM00861 Transketolase, pyrimidine binding domain AB987_2306 SM00881 CoA binding domain AB987_2328 SM00851 MGS-like domain AB987_2328 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB987_2329 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB987_2332 SM01103 AB987_2332 AB987_2334 SM00382 ATPases associated with a variety of cellular activities AB987_2350 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB987_2352 SM00883 Chaperonin 10 Kd subunit AB987_2355 SM00849 Metallo-beta-lactamase superfamily AB987_2379 SM00487 DEAD-like helicases superfamily AB987_2392 SM00098 Alkaline phosphatase homologues AB987_2393 SM00098 Alkaline phosphatase homologues AB987_2395 SM00342 helix_turn_helix, arabinose operon control protein AB987_2396 SM00267 diguanylate cyclase AB987_2423 SM00978 AB987_2423 AB987_2424 SM00382 ATPases associated with a variety of cellular activities AB987_2431 SM00893 Electron transfer flavoprotein domain AB987_2432 SM00893 Electron transfer flavoprotein domain AB987_2433 SM00434 DNA Topoisomerase IV AB987_2448 SM00382 ATPases associated with a variety of cellular activities AB987_2449 SM00849 Metallo-beta-lactamase superfamily AB987_2473 SM00382 ATPases associated with a variety of cellular activities AB987_2474 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB987_2475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB987_2476 SM01211 AB987_2476 AB987_2491 SM00382 ATPases associated with a variety of cellular activities AB987_2502 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_2505 SM00838 Elongation factor G C-terminus AB987_2508 SM00358 Double-stranded RNA binding motif AB987_2523 SM00267 diguanylate cyclase AB987_2525 SM00487 DEAD-like helicases superfamily AB987_2525 SM00490 helicase superfamily c-terminal domain AB987_2528 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB987_2532 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB987_2552 SM01329 AB987_2552 AB987_2563 SM00880 AB987_2563 AB987_2563 SM01118 AB987_2563 AB987_2569 SM00487 DEAD-like helicases superfamily AB987_2569 SM00490 helicase superfamily c-terminal domain AB987_2581 SM00344 helix_turn_helix ASNC type AB987_2587 SM00382 ATPases associated with a variety of cellular activities AB987_2597 SM00936 Penicillin-binding protein 5, C-terminal domain AB987_2601 SM00257 Lysin motif AB987_2609 SM00052 Putative diguanylate phosphodiesterase AB987_2612 SM00841 Elongation factor P, C-terminal AB987_2612 SM01185 AB987_2612 AB987_2630 SM00382 ATPases associated with a variety of cellular activities AB987_2639 SM00382 ATPases associated with a variety of cellular activities AB987_2640 SM00382 ATPases associated with a variety of cellular activities AB987_2652 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB987_2653 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB987_2655 SM00463 Small MutS-related domain AB987_2663 SM01230 AB987_2663 AB987_2674 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_2676 SM00919 Malic enzyme, NAD binding domain AB987_2676 SM01274 AB987_2676 AB987_2677 SM00052 Putative diguanylate phosphodiesterase AB987_2677 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB987_2677 SM00091 PAS domain AB987_2677 SM00267 diguanylate cyclase AB987_2680 SM00996 S-adenosyl-L-homocysteine hydrolase AB987_2680 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB987_2684 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_2694 SM00342 helix_turn_helix, arabinose operon control protein AB987_2703 SM00382 ATPases associated with a variety of cellular activities AB987_2706 SM00479 AB987_2706 AB987_2714 SM00062 Bacterial periplasmic substrate-binding proteins AB987_2717 SM00382 ATPases associated with a variety of cellular activities AB987_2721 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_2726 SM00382 ATPases associated with a variety of cellular activities AB987_2728 SM00448 cheY-homologous receiver domain AB987_2728 SM00862 Transcriptional regulatory protein, C terminal AB987_2729 SM00387 Histidine kinase-like ATPases AB987_2729 SM00388 His Kinase A (phosphoacceptor) domain AB987_2740 SM00830 Chorismate mutase type II AB987_2753 SM00357 Cold shock protein domain AB987_2754 SM00487 DEAD-like helicases superfamily AB987_2754 SM00490 helicase superfamily c-terminal domain AB987_2758 SM00855 Phosphoglycerate mutase family AB987_2790 SM01034 Sensors of blue-light using FAD AB987_2794 SM00342 helix_turn_helix, arabinose operon control protein AB987_2798 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_2798 SM00895 AB987_2798 AB987_2802 SM00972 Spore Coat Protein U domain AB987_2807 SM00972 Spore Coat Protein U domain AB987_2832 SM00849 Metallo-beta-lactamase superfamily AB987_2834 SM00382 ATPases associated with a variety of cellular activities AB987_2834 SM00930 AB987_2834 AB987_2836 SM01209 AB987_2836 AB987_2836 SM01210 AB987_2836 AB987_2837 SM00798 AICARFT/IMPCHase bienzyme AB987_2837 SM00851 MGS-like domain AB987_2842 SM01228 AB987_2842 AB987_2847 SM00460 Transglutaminase/protease-like homologues AB987_2849 SM01005 Alanine racemase, C-terminal domain AB987_2874 SM00937 AB987_2874 AB987_2877 SM00062 Bacterial periplasmic substrate-binding proteins AB987_2878 SM00342 helix_turn_helix, arabinose operon control protein AB987_2879 SM00822 AB987_2879 AB987_2882 SM00903 Flavin reductase like domain AB987_2885 SM00905 Dihydroneopterin aldolase AB987_2890 SM00387 Histidine kinase-like ATPases AB987_2890 SM00388 His Kinase A (phosphoacceptor) domain AB987_2891 SM00448 cheY-homologous receiver domain AB987_2891 SM00862 Transcriptional regulatory protein, C terminal AB987_2892 SM01230 AB987_2892 AB987_2911 SM00411 bacterial (prokaryotic) histone like domain AB987_2949 SM00363 S4 RNA-binding domain AB987_2954 SM00853 MutL C terminal dimerisation domain AB987_2954 SM01340 AB987_2954 AB987_2970 SM00862 Transcriptional regulatory protein, C terminal AB987_2973 SM00382 ATPases associated with a variety of cellular activities AB987_2975 SM00342 helix_turn_helix, arabinose operon control protein AB987_2975 SM00871 Bacterial transcription activator, effector binding domain AB987_2983 SM00830 Chorismate mutase type II AB987_2984 SM00344 helix_turn_helix ASNC type AB987_2996 SM00382 ATPases associated with a variety of cellular activities AB987_3005 SM00344 helix_turn_helix ASNC type AB987_3011 SM00822 AB987_3011 AB987_3016 SM00382 ATPases associated with a variety of cellular activities AB987_3022 SM00226 Low molecular weight phosphatase family AB987_3031 SM01236 AB987_3031 AB987_3034 SM00878 Biotin carboxylase C-terminal domain AB987_3039 SM00448 cheY-homologous receiver domain AB987_3039 SM01012 AB987_3039 AB987_3043 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB987_3045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB987_3046 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_3049 SM00852 Probable molybdopterin binding domain AB987_3050 SM00852 Probable molybdopterin binding domain AB987_3071 SM00382 ATPases associated with a variety of cellular activities AB987_3071 SM00448 cheY-homologous receiver domain AB987_3072 SM00091 PAS domain AB987_3072 SM00387 Histidine kinase-like ATPases AB987_3072 SM00388 His Kinase A (phosphoacceptor) domain AB987_3073 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_3079 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_3081 SM00935 Outer membrane protein (OmpH-like) AB987_3087 SM00382 ATPases associated with a variety of cellular activities AB987_3088 SM00363 S4 RNA-binding domain AB987_3095 SM00344 helix_turn_helix ASNC type AB987_3105 SM00052 Putative diguanylate phosphodiesterase AB987_3105 SM00091 PAS domain AB987_3105 SM00267 diguanylate cyclase AB987_3107 SM00347 helix_turn_helix multiple antibiotic resistance protein AB987_3120 SM00116 Domain in cystathionine beta-synthase and other proteins. AB987_3126 SM00382 ATPases associated with a variety of cellular activities AB987_3126 SM00962 SRP54-type protein, GTPase domain AB987_3126 SM00963 SRP54-type protein, helical bundle domain AB987_3136 SM01264 AB987_3136 AB987_3145 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB987_3148 SM00382 ATPases associated with a variety of cellular activities AB987_3148 SM01086 C-terminal, D2-small domain, of ClpB protein AB987_3161 SM01192 AB987_3161 AB987_3161 SM01193 AB987_3161 AB987_3165 SM00882 Coenzyme A transferase AB987_3166 SM00882 Coenzyme A transferase AB987_3168 SM00998 Adenylosuccinate lyase C-terminus AB987_3175 SM00710 Parallel beta-helix repeats AB987_3177 SM00564 beta-propeller repeat AB987_3181 SM00849 Metallo-beta-lactamase superfamily AB987_3182 SM00346 helix_turn_helix isocitrate lyase regulation AB987_3186 SM00855 Phosphoglycerate mutase family AB987_3191 SM00347 helix_turn_helix multiple antibiotic resistance protein AB987_3200 SM00903 Flavin reductase like domain AB987_3201 SM00342 helix_turn_helix, arabinose operon control protein AB987_3207 SM00882 Coenzyme A transferase AB987_3208 SM00882 Coenzyme A transferase AB987_3211 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB987_3214 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3214 SM00895 AB987_3214 AB987_3225 SM00422 helix_turn_helix, mercury resistance AB987_3251 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3251 SM00866 AB987_3251 AB987_3275 SM00382 ATPases associated with a variety of cellular activities AB987_3277 SM00342 helix_turn_helix, arabinose operon control protein AB987_3293 SM00530 Helix-turn-helix XRE-family like proteins AB987_3303 SM00530 Helix-turn-helix XRE-family like proteins AB987_3306 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB987_3319 SM00382 ATPases associated with a variety of cellular activities AB987_3319 SM01086 C-terminal, D2-small domain, of ClpB protein AB987_3332 SM00829 Enoylreductase AB987_3343 SM00382 ATPases associated with a variety of cellular activities AB987_3344 SM00382 ATPases associated with a variety of cellular activities AB987_3347 SM00382 ATPases associated with a variety of cellular activities AB987_3360 SM00155 Phospholipase D. Active site motifs. AB987_3365 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_3376 SM00382 ATPases associated with a variety of cellular activities AB987_3384 SM00342 helix_turn_helix, arabinose operon control protein AB987_3387 SM00903 Flavin reductase like domain AB987_3395 SM00342 helix_turn_helix, arabinose operon control protein AB987_3405 SM00882 Coenzyme A transferase AB987_3406 SM00882 Coenzyme A transferase AB987_3417 SM00567 E-Z type HEAT repeats AB987_3424 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3424 SM00866 AB987_3424 AB987_3428 SM00342 helix_turn_helix, arabinose operon control protein AB987_3433 SM00849 Metallo-beta-lactamase superfamily AB987_3434 SM00382 ATPases associated with a variety of cellular activities AB987_3436 SM00829 Enoylreductase AB987_3440 SM00861 Transketolase, pyrimidine binding domain AB987_3443 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_3446 SM00267 diguanylate cyclase AB987_3451 SM00382 ATPases associated with a variety of cellular activities AB987_3459 SM00493 AB987_3459 AB987_3473 SM01324 AB987_3473 AB987_3481 SM00382 ATPases associated with a variety of cellular activities AB987_3491 SM00855 Phosphoglycerate mutase family AB987_3497 SM01006 Siderophore biosynthesis protein domain AB987_3519 SM00411 bacterial (prokaryotic) histone like domain AB987_3526 SM00271 DnaJ molecular chaperone homology domain AB987_3529 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AB987_3531 SM00487 DEAD-like helicases superfamily AB987_3531 SM00490 helicase superfamily c-terminal domain AB987_3531 SM00982 AB987_3531 AB987_3531 SM01058 CarD-like/TRCF domain AB987_3545 SM00382 ATPases associated with a variety of cellular activities AB987_3559 SM00342 helix_turn_helix, arabinose operon control protein AB987_3566 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB987_3568 SM00411 bacterial (prokaryotic) histone like domain AB987_3569 SM00316 Ribosomal protein S1-like RNA-binding domain AB987_3575 SM00986 Uracil DNA glycosylase superfamily AB987_3575 SM00987 UreE urease accessory protein, C-terminal domain AB987_3587 SM00382 ATPases associated with a variety of cellular activities AB987_3590 SM00470 ParB-like nuclease domain AB987_3602 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB987_3604 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB987_3608 SM00382 ATPases associated with a variety of cellular activities AB987_3610 SM00342 helix_turn_helix, arabinose operon control protein AB987_3614 SM00344 helix_turn_helix ASNC type AB987_3621 SM00867 YceI-like domain AB987_3623 SM00861 Transketolase, pyrimidine binding domain AB987_3631 SM00530 Helix-turn-helix XRE-family like proteins AB987_3636 SM00729 Elongator protein 3, MiaB family, Radical SAM AB987_3636 SM00876 Biotin and Thiamin Synthesis associated domain AB987_3642 SM01236 AB987_3642 AB987_3649 SM00344 helix_turn_helix ASNC type AB987_3651 SM00382 ATPases associated with a variety of cellular activities AB987_3654 SM00062 Bacterial periplasmic substrate-binding proteins AB987_3663 SM00382 ATPases associated with a variety of cellular activities AB987_3663 SM00930 AB987_3663 AB987_3667 SM00100 Cyclic nucleotide-monophosphate binding domain AB987_3667 SM00419 helix_turn_helix, cAMP Regulatory protein AB987_3674 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB987_3677 SM00342 helix_turn_helix, arabinose operon control protein AB987_3682 SM00870 AB987_3682 AB987_3683 SM00481 DNA polymerase alpha chain like domain AB987_3693 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB987_3701 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3701 SM00895 AB987_3701 AB987_3706 SM00382 ATPases associated with a variety of cellular activities AB987_3707 SM00062 Bacterial periplasmic substrate-binding proteins AB987_3717 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3721 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB987_3733 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB987_3741 SM00450 Rhodanese Homology Domain AB987_3750 SM00062 Bacterial periplasmic substrate-binding proteins AB987_3751 SM00062 Bacterial periplasmic substrate-binding proteins AB987_3752 SM00382 ATPases associated with a variety of cellular activities AB987_3760 SM00421 helix_turn_helix, Lux Regulon AB987_3760 SM00448 cheY-homologous receiver domain AB987_3761 SM00387 Histidine kinase-like ATPases AB987_3761 SM00388 His Kinase A (phosphoacceptor) domain AB987_3761 SM00448 cheY-homologous receiver domain AB987_3763 SM00344 helix_turn_helix ASNC type AB987_3768 SM00384 DNA binding domain with preference for A/T rich regions AB987_3771 SM01060 AB987_3771 AB987_3772 SM01236 AB987_3772 AB987_3787 SM01060 AB987_3787 AB987_3792 SM00857 Resolvase, N terminal domain AB987_3795 SM00530 Helix-turn-helix XRE-family like proteins AB987_3809 SM01091 Transporter associated domain AB987_3811 SM00530 Helix-turn-helix XRE-family like proteins