locus-tag class description AB895_0040 PF01555 DNA methylase AB895_0045 PF01726 LexA DNA binding domain AB895_0045 PF00717 Peptidase S24-like AB895_0062 PF01645 Conserved region in glutamate synthase AB895_0065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AB895_0065 PF01565 FAD binding domain AB895_0066 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB895_0068 PF00465 Iron-containing alcohol dehydrogenase AB895_0069 PF03061 Thioesterase superfamily AB895_0070 PF05506 Domain of unknown function (DUF756) AB895_0070 PF04185 Phosphoesterase family AB895_0071 PF05506 Domain of unknown function (DUF756) AB895_0071 PF04185 Phosphoesterase family AB895_0073 PF12169 DNA polymerase III subunits gamma and tau domain III AB895_0073 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AB895_0073 PF12170 DNA polymerase III tau subunit V interacting with alpha AB895_0074 PF07690 Major Facilitator Superfamily AB895_0079 PF00108 Thiolase, N-terminal domain AB895_0079 PF02803 Thiolase, C-terminal domain AB895_0081 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0081 PF03466 LysR substrate binding domain AB895_0083 PF01810 LysE type translocator AB895_0084 PF01037 Lrp/AsnC ligand binding domain AB895_0085 PF03594 Benzoate membrane transport protein AB895_0086 PF02308 MgtC family AB895_0087 PF00690 Cation transporter/ATPase, N-terminus AB895_0087 PF00689 Cation transporting ATPase, C-terminus AB895_0091 PF00582 Universal stress protein family AB895_0092 PF00005 ABC transporter AB895_0092 PF12848 ABC transporter AB895_0096 PF07715 TonB-dependent Receptor Plug Domain AB895_0096 PF00593 TonB dependent receptor AB895_0102 PF00924 Mechanosensitive ion channel AB895_0103 PF00593 TonB dependent receptor AB895_0103 PF07715 TonB-dependent Receptor Plug Domain AB895_0104 PF00440 Bacterial regulatory proteins, tetR family AB895_0106 PF01037 Lrp/AsnC ligand binding domain AB895_0107 PF01817 Chorismate mutase type II AB895_0113 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_0114 PF00577 Outer membrane usher protein AB895_0114 PF13953 PapC C-terminal domain AB895_0114 PF13954 PapC N-terminal domain AB895_0117 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AB895_0117 PF11940 Domain of unknown function (DUF3458) Ig-like fold AB895_0117 PF01433 Peptidase family M1 domain AB895_0120 PF02110 Hydroxyethylthiazole kinase family AB895_0121 PF06445 GyrI-like small molecule binding domain AB895_0123 PF05970 PIF1-like helicase AB895_0123 PF14493 Helix-turn-helix domain AB895_0124 PF00465 Iron-containing alcohol dehydrogenase AB895_0127 PF00171 Aldehyde dehydrogenase family AB895_0128 PF13520 Amino acid permease AB895_0129 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AB895_0130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AB895_0131 PF00958 GMP synthase C terminal domain AB895_0131 PF02540 NAD synthase AB895_0131 PF00117 Glutamine amidotransferase class-I AB895_0133 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB895_0133 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AB895_0134 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB895_0135 PF00149 Calcineurin-like phosphoesterase AB895_0137 PF00881 Nitroreductase family AB895_0139 PF17209 Hfq protein AB895_0141 PF08676 MutL C terminal dimerisation domain AB895_0141 PF01119 DNA mismatch repair protein, C-terminal domain AB895_0142 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AB895_0143 PF01479 S4 domain AB895_0143 PF00849 RNA pseudouridylate synthase AB895_0146 PF01479 S4 domain AB895_0146 PF00849 RNA pseudouridylate synthase AB895_0149 PF04284 Protein of unknown function (DUF441) AB895_0150 PF03466 LysR substrate binding domain AB895_0150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0153 PF07690 Major Facilitator Superfamily AB895_0154 PF00520 Ion transport protein AB895_0154 PF00027 Cyclic nucleotide-binding domain AB895_0156 PF11791 Aconitate B N-terminal domain AB895_0156 PF06434 Aconitate hydratase 2 N-terminus AB895_0156 PF00330 Aconitase family (aconitate hydratase) AB895_0159 PF07244 Surface antigen variable number repeat AB895_0159 PF01103 Surface antigen AB895_0159 PF17243 POTRA domain TamA domain 1 AB895_0160 PF07690 Major Facilitator Superfamily AB895_0161 PF03232 Ubiquinone biosynthesis protein COQ7 AB895_0163 PF00120 Glutamine synthetase, catalytic domain AB895_0164 PF00072 Response regulator receiver domain AB895_0164 PF00486 Transcriptional regulatory protein, C terminal AB895_0165 PF13493 Domain of unknown function (DUF4118) AB895_0165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0165 PF00512 His Kinase A (phospho-acceptor) domain AB895_0165 PF02702 Osmosensitive K+ channel His kinase sensor domain AB895_0166 PF02669 K+-transporting ATPase, c chain AB895_0168 PF03814 Potassium-transporting ATPase A subunit AB895_0171 PF03109 ABC1 family AB895_0172 PF00899 ThiF family AB895_0173 PF01613 Flavin reductase like domain AB895_0174 PF13193 AMP-binding enzyme C-terminal domain AB895_0174 PF00501 AMP-binding enzyme AB895_0175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0175 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0176 PF00106 short chain dehydrogenase AB895_0177 PF12833 Helix-turn-helix domain AB895_0178 PF13847 Methyltransferase domain AB895_0178 PF17827 PrmC N-terminal domain AB895_0179 PF00472 RF-1 domain AB895_0179 PF03462 PCRF domain AB895_0181 PF03466 LysR substrate binding domain AB895_0181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0184 PF00296 Luciferase-like monooxygenase AB895_0186 PF13994 PgaD-like protein AB895_0187 PF00535 Glycosyl transferase family 2 AB895_0188 PF14883 Hypothetical glycosyl hydrolase family 13 AB895_0188 PF01522 Polysaccharide deacetylase AB895_0190 PF03618 Kinase/pyrophosphorylase AB895_0191 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AB895_0191 PF02896 PEP-utilising enzyme, TIM barrel domain AB895_0191 PF00391 PEP-utilising enzyme, mobile domain AB895_0193 PF06481 COX Aromatic Rich Motif AB895_0193 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AB895_0194 PF00115 Cytochrome C and Quinol oxidase polypeptide I AB895_0195 PF00510 Cytochrome c oxidase subunit III AB895_0196 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AB895_0197 PF01040 UbiA prenyltransferase family AB895_0198 PF01250 Ribosomal protein S6 AB895_0199 PF01084 Ribosomal protein S18 AB895_0200 PF03948 Ribosomal protein L9, C-terminal domain AB895_0200 PF01281 Ribosomal protein L9, N-terminal domain AB895_0201 PF03796 DnaB-like helicase C terminal domain AB895_0201 PF00772 DnaB-like helicase N terminal domain AB895_0202 PF01168 Alanine racemase, N-terminal domain AB895_0202 PF00842 Alanine racemase, C-terminal domain AB895_0204 PF01841 Transglutaminase-like superfamily AB895_0204 PF08379 Bacterial transglutaminase-like N-terminal region AB895_0206 PF14403 Circularly permuted ATP-grasp type 2 AB895_0208 PF01134 Glucose inhibited division protein A AB895_0208 PF13932 GidA associated domain AB895_0212 PF02954 Bacterial regulatory protein, Fis family AB895_0213 PF01808 AICARFT/IMPCHase bienzyme AB895_0213 PF02142 MGS-like domain AB895_0214 PF02843 Phosphoribosylglycinamide synthetase, C domain AB895_0214 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AB895_0214 PF02844 Phosphoribosylglycinamide synthetase, N domain AB895_0215 PF03180 NLPA lipoprotein AB895_0216 PF09383 NIL domain AB895_0216 PF00005 ABC transporter AB895_0217 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0218 PF00753 Metallo-beta-lactamase superfamily AB895_0218 PF16123 Hydroxyacylglutathione hydrolase C-terminus AB895_0220 PF00375 Sodium:dicarboxylate symporter family AB895_0224 PF07995 Glucose / Sorbosone dehydrogenase AB895_0225 PF00892 EamA-like transporter family AB895_0226 PF01177 Asp/Glu/Hydantoin racemase AB895_0228 PF02470 MlaD protein AB895_0229 PF04403 Paraquat-inducible protein A AB895_0234 PF08946 Osmosensory transporter coiled coil AB895_0234 PF00083 Sugar (and other) transporter AB895_0245 PF00392 Bacterial regulatory proteins, gntR family AB895_0245 PF07729 FCD domain AB895_0247 PF03616 Sodium/glutamate symporter AB895_0248 PF00561 alpha/beta hydrolase fold AB895_0253 PF04076 Bacterial OB fold (BOF) protein AB895_0259 PF00324 Amino acid permease AB895_0260 PF00171 Aldehyde dehydrogenase family AB895_0261 PF00171 Aldehyde dehydrogenase family AB895_0262 PF00202 Aminotransferase class-III AB895_0263 PF03466 LysR substrate binding domain AB895_0263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0268 PF00069 Protein kinase domain AB895_0272 PF00814 Glycoprotease family AB895_0273 PF01165 Ribosomal protein S21 AB895_0274 PF09424 Yqey-like protein AB895_0275 PF01435 Peptidase family M48 AB895_0276 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB895_0276 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB895_0279 PF00156 Phosphoribosyl transferase domain AB895_0281 PF01180 Dihydroorotate dehydrogenase AB895_0285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AB895_0285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AB895_0286 PF00881 Nitroreductase family AB895_0288 PF00271 Helicase conserved C-terminal domain AB895_0288 PF00270 DEAD/DEAH box helicase AB895_0289 PF00313 'Cold-shock' DNA-binding domain AB895_0291 PF04545 Sigma-70, region 4 AB895_0291 PF00140 Sigma-70 factor, region 1.2 AB895_0291 PF04542 Sigma-70 region 2 AB895_0292 PF04241 Protein of unknown function (DUF423) AB895_0294 PF05690 Thiazole biosynthesis protein ThiG AB895_0296 PF03883 Peroxide stress protein YaaA AB895_0298 PF00753 Metallo-beta-lactamase superfamily AB895_0299 PF01546 Peptidase family M20/M25/M40 AB895_0299 PF07687 Peptidase dimerisation domain AB895_0301 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB895_0302 PF01842 ACT domain AB895_0302 PF01817 Chorismate mutase type II AB895_0302 PF00800 Prephenate dehydratase AB895_0304 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0304 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0304 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0305 PF00375 Sodium:dicarboxylate symporter family AB895_0306 PF02885 Glycosyl transferase family, helical bundle domain AB895_0306 PF00591 Glycosyl transferase family, a/b domain AB895_0307 PF07023 Protein of unknown function (DUF1315) AB895_0308 PF01513 ATP-NAD kinase AB895_0309 PF14814 Bifunctional transglycosylase second domain AB895_0309 PF00912 Transglycosylase AB895_0309 PF00905 Penicillin binding protein transpeptidase domain AB895_0311 PF00293 NUDIX domain AB895_0313 PF00512 His Kinase A (phospho-acceptor) domain AB895_0313 PF08521 Two-component sensor kinase N-terminal AB895_0313 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0314 PF00486 Transcriptional regulatory protein, C terminal AB895_0314 PF00072 Response regulator receiver domain AB895_0316 PF00437 Type II/IV secretion system protein AB895_0318 PF01980 tRNA-methyltransferase O AB895_0318 PF18389 TrmO C-terminal domain AB895_0319 PF00175 Oxidoreductase NAD-binding domain AB895_0319 PF00970 Oxidoreductase FAD-binding domain AB895_0320 PF02567 Phenazine biosynthesis-like protein AB895_0321 PF00155 Aminotransferase class I and II AB895_0321 PF00392 Bacterial regulatory proteins, gntR family AB895_0324 PF00893 Small Multidrug Resistance protein AB895_0325 PF00005 ABC transporter AB895_0326 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0327 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0328 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB895_0329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0329 PF03466 LysR substrate binding domain AB895_0331 PF13533 Biotin-lipoyl like AB895_0332 PF00873 AcrB/AcrD/AcrF family AB895_0333 PF02321 Outer membrane efflux protein AB895_0334 PF00464 Serine hydroxymethyltransferase AB895_0340 PF00005 ABC transporter AB895_0341 PF01061 ABC-2 type transporter AB895_0342 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AB895_0342 PF14489 QueF-like protein AB895_0344 PF01098 Cell cycle protein AB895_0345 PF13406 Transglycosylase SLT domain AB895_0346 PF05036 Sporulation related domain AB895_0346 PF03330 Lytic transglycolase AB895_0349 PF12833 Helix-turn-helix domain AB895_0351 PF00889 Elongation factor TS AB895_0352 PF00318 Ribosomal protein S2 AB895_0353 PF00557 Metallopeptidase family M24 AB895_0355 PF07690 Major Facilitator Superfamily AB895_0358 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB895_0358 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_0359 PF04055 Radical SAM superfamily AB895_0360 PF09317 Domain of unknown function (DUF1974) AB895_0360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0363 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB895_0363 PF05221 S-adenosyl-L-homocysteine hydrolase AB895_0364 PF02219 Methylenetetrahydrofolate reductase AB895_0365 PF04452 RNA methyltransferase AB895_0366 PF03707 Bacterial signalling protein N terminal repeat AB895_0366 PF00563 EAL domain AB895_0366 PF00990 Diguanylate cyclase, GGDEF domain AB895_0367 PF01515 Phosphate acetyl/butaryl transferase AB895_0367 PF03949 Malic enzyme, NAD binding domain AB895_0367 PF00390 Malic enzyme, N-terminal domain AB895_0368 PF12627 Probable RNA and SrmB- binding site of polymerase A AB895_0368 PF01743 Poly A polymerase head domain AB895_0369 PF13180 PDZ domain AB895_0370 PF01784 NIF3 (NGG1p interacting factor 3) AB895_0371 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB895_0371 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB895_0378 PF01040 UbiA prenyltransferase family AB895_0379 PF04345 Chorismate lyase AB895_0381 PF00854 POT family AB895_0383 PF00117 Glutamine amidotransferase class-I AB895_0384 PF01433 Peptidase family M1 domain AB895_0384 PF11838 ERAP1-like C-terminal domain AB895_0385 PF00593 TonB dependent receptor AB895_0385 PF07715 TonB-dependent Receptor Plug Domain AB895_0386 PF00591 Glycosyl transferase family, a/b domain AB895_0386 PF02885 Glycosyl transferase family, helical bundle domain AB895_0387 PF00218 Indole-3-glycerol phosphate synthase AB895_0390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB895_0390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AB895_0391 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_0391 PF01799 [2Fe-2S] binding domain AB895_0391 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AB895_0391 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB895_0393 PF00144 Beta-lactamase AB895_0396 PF05675 Protein of unknown function (DUF817) AB895_0397 PF01208 Uroporphyrinogen decarboxylase (URO-D) AB895_0399 PF00425 chorismate binding enzyme AB895_0401 PF13737 Transposase DDE domain AB895_0404 PF00975 Thioesterase domain AB895_0405 PF00664 ABC transporter transmembrane region AB895_0405 PF00005 ABC transporter AB895_0406 PF00005 ABC transporter AB895_0406 PF00664 ABC transporter transmembrane region AB895_0408 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB895_0409 PF00857 Isochorismatase family AB895_0409 PF00550 Phosphopantetheine attachment site AB895_0410 PF13193 AMP-binding enzyme C-terminal domain AB895_0410 PF00501 AMP-binding enzyme AB895_0411 PF00668 Condensation domain AB895_0411 PF00501 AMP-binding enzyme AB895_0411 PF00550 Phosphopantetheine attachment site AB895_0412 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB895_0413 PF07715 TonB-dependent Receptor Plug Domain AB895_0413 PF00593 TonB dependent receptor AB895_0414 PF01497 Periplasmic binding protein AB895_0415 PF00005 ABC transporter AB895_0416 PF01032 FecCD transport family AB895_0417 PF01032 FecCD transport family AB895_0419 PF00550 Phosphopantetheine attachment site AB895_0419 PF00668 Condensation domain AB895_0419 PF00975 Thioesterase domain AB895_0419 PF13193 AMP-binding enzyme C-terminal domain AB895_0419 PF00501 AMP-binding enzyme AB895_0420 PF00501 AMP-binding enzyme AB895_0420 PF00550 Phosphopantetheine attachment site AB895_0420 PF00668 Condensation domain AB895_0420 PF13193 AMP-binding enzyme C-terminal domain AB895_0422 PF13309 HTH domain AB895_0422 PF08348 YheO-like PAS domain AB895_0423 PF00291 Pyridoxal-phosphate dependent enzyme AB895_0424 PF17954 Quercetinase C-terminal cupin domain AB895_0424 PF02678 Pirin AB895_0427 PF04328 Selenoprotein, putative AB895_0428 PF02554 Carbon starvation protein CstA AB895_0428 PF13722 5TM C-terminal transporter carbon starvation CstA AB895_0429 PF01132 Elongation factor P (EF-P) OB domain AB895_0429 PF08207 Elongation factor P (EF-P) KOW-like domain AB895_0429 PF09285 Elongation factor P, C-terminal AB895_0430 PF04055 Radical SAM superfamily AB895_0432 PF00563 EAL domain AB895_0432 PF12792 CSS motif domain associated with EAL AB895_0433 PF01197 Ribosomal protein L31 AB895_0434 PF13593 SBF-like CPA transporter family (DUF4137) AB895_0435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB895_0436 PF07690 Major Facilitator Superfamily AB895_0438 PF13654 AAA domain AB895_0438 PF05362 Lon protease (S16) C-terminal proteolytic domain AB895_0439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0439 PF03466 LysR substrate binding domain AB895_0440 PF01476 LysM domain AB895_0440 PF01551 Peptidase family M23 AB895_0441 PF01975 Survival protein SurE AB895_0444 PF00768 D-alanyl-D-alanine carboxypeptidase AB895_0444 PF07943 Penicillin-binding protein 5, C-terminal domain AB895_0445 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_0446 PF00293 NUDIX domain AB895_0448 PF04356 Protein of unknown function (DUF489) AB895_0449 PF08328 Adenylosuccinate lyase C-terminal AB895_0449 PF00206 Lyase AB895_0452 PF08496 Peptidase family S49 N-terminal AB895_0452 PF01343 Peptidase family S49 AB895_0453 PF00005 ABC transporter AB895_0454 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0455 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0456 PF12849 PBP superfamily domain AB895_0457 PF00324 Amino acid permease AB895_0458 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB895_0458 PF00205 Thiamine pyrophosphate enzyme, central domain AB895_0458 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB895_0459 PF01037 Lrp/AsnC ligand binding domain AB895_0460 PF00171 Aldehyde dehydrogenase family AB895_0461 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB895_0462 PF00202 Aminotransferase class-III AB895_0465 PF02525 Flavodoxin-like fold AB895_0466 PF00487 Fatty acid desaturase AB895_0467 PF00970 Oxidoreductase FAD-binding domain AB895_0467 PF00175 Oxidoreductase NAD-binding domain AB895_0467 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_0468 PF00440 Bacterial regulatory proteins, tetR family AB895_0471 PF18337 RapA N-terminal Tudor like domain AB895_0471 PF12137 RNA polymerase recycling family C-terminal AB895_0471 PF00271 Helicase conserved C-terminal domain AB895_0471 PF18339 RapA N-terminal Tudor like domain 1 AB895_0471 PF00176 SNF2 family N-terminal domain AB895_0472 PF00849 RNA pseudouridylate synthase AB895_0474 PF00202 Aminotransferase class-III AB895_0475 PF02581 Thiamine monophosphate synthase AB895_0480 PF00675 Insulinase (Peptidase family M16) AB895_0480 PF05193 Peptidase M16 inactive domain AB895_0481 PF02567 Phenazine biosynthesis-like protein AB895_0483 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0483 PF03466 LysR substrate binding domain AB895_0484 PF06779 Uncharacterised MFS-type transporter YbfB AB895_0488 PF00180 Isocitrate/isopropylmalate dehydrogenase AB895_0489 PF00849 RNA pseudouridylate synthase AB895_0490 PF03971 Monomeric isocitrate dehydrogenase AB895_0492 PF00768 D-alanyl-D-alanine carboxypeptidase AB895_0492 PF07943 Penicillin-binding protein 5, C-terminal domain AB895_0493 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_0494 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_0495 PF03441 FAD binding domain of DNA photolyase AB895_0495 PF00875 DNA photolyase AB895_0501 PF02350 UDP-N-acetylglucosamine 2-epimerase AB895_0504 PF03060 Nitronate monooxygenase AB895_0505 PF01207 Dihydrouridine synthase (Dus) AB895_0506 PF07759 Protein of unknown function (DUF1615) AB895_0508 PF01472 PUA domain AB895_0508 PF00696 Amino acid kinase family AB895_0509 PF01926 50S ribosome-binding GTPase AB895_0509 PF01018 GTP1/OBG AB895_0512 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB895_0512 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB895_0513 PF00892 EamA-like transporter family AB895_0515 PF17757 UvrB interaction domain AB895_0515 PF12344 Ultra-violet resistance protein B AB895_0515 PF00271 Helicase conserved C-terminal domain AB895_0515 PF04851 Type III restriction enzyme, res subunit AB895_0515 PF02151 UvrB/uvrC motif AB895_0517 PF17151 Periplasmic sensor domain AB895_0517 PF00990 Diguanylate cyclase, GGDEF domain AB895_0524 PF00106 short chain dehydrogenase AB895_0525 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AB895_0526 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AB895_0527 PF11967 Recombination protein O N terminal AB895_0527 PF02565 Recombination protein O C terminal AB895_0529 PF07650 KH domain AB895_0529 PF01926 50S ribosome-binding GTPase AB895_0530 PF00035 Double-stranded RNA binding motif AB895_0530 PF14622 Ribonuclease-III-like AB895_0532 PF10502 Signal peptidase, peptidase S26 AB895_0533 PF00679 Elongation factor G C-terminus AB895_0533 PF06421 GTP-binding protein LepA C-terminus AB895_0533 PF00009 Elongation factor Tu GTP binding domain AB895_0533 PF03144 Elongation factor Tu domain 2 AB895_0534 PF00872 Transposase, Mutator family AB895_0536 PF13180 PDZ domain AB895_0537 PF02910 Fumarate reductase flavoprotein C-term AB895_0537 PF00890 FAD binding domain AB895_0539 PF02223 Thymidylate kinase AB895_0540 PF02618 YceG-like family AB895_0541 PF01063 Amino-transferase class IV AB895_0545 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0546 PF00528 Binding-protein-dependent transport system inner membrane component AB895_0547 PF00005 ABC transporter AB895_0547 PF12857 TOBE-like domain AB895_0548 PF03466 LysR substrate binding domain AB895_0548 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0550 PF14602 Hexapeptide repeat of succinyl-transferase AB895_0550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AB895_0550 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_0552 PF06508 Queuosine biosynthesis protein QueC AB895_0555 PF00578 AhpC/TSA family AB895_0557 PF00293 NUDIX domain AB895_0557 PF01467 Cytidylyltransferase-like AB895_0558 PF00378 Enoyl-CoA hydratase/isomerase AB895_0559 PF01784 NIF3 (NGG1p interacting factor 3) AB895_0561 PF07690 Major Facilitator Superfamily AB895_0562 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AB895_0562 PF02769 AIR synthase related protein, C-terminal domain AB895_0562 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AB895_0563 PF01966 HD domain AB895_0564 PF01330 RuvA N terminal domain AB895_0564 PF07499 RuvA, C-terminal domain AB895_0565 PF17864 RuvB AAA lid domain AB895_0565 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB895_0565 PF05491 RuvB C-terminal winged helix domain AB895_0566 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_0567 PF01546 Peptidase family M20/M25/M40 AB895_0567 PF07687 Peptidase dimerisation domain AB895_0568 PF03061 Thioesterase superfamily AB895_0569 PF01618 MotA/TolQ/ExbB proton channel family AB895_0570 PF02472 Biopolymer transport protein ExbD/TolR AB895_0572 PF07676 WD40-like Beta Propeller Repeat AB895_0572 PF04052 TolB amino-terminal domain AB895_0573 PF00691 OmpA family AB895_0575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AB895_0576 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB895_0576 PF00588 SpoU rRNA Methylase family AB895_0582 PF00308 Bacterial dnaA protein AB895_0582 PF11638 DnaA N-terminal domain AB895_0582 PF08299 Bacterial dnaA protein helix-turn-helix AB895_0583 PF01594 AI-2E family transporter AB895_0584 PF02769 AIR synthase related protein, C-terminal domain AB895_0584 PF00586 AIR synthase related protein, N-terminal domain AB895_0585 PF00551 Formyl transferase AB895_0586 PF12697 Alpha/beta hydrolase family AB895_0587 PF06965 Na+/H+ antiporter 1 AB895_0587 PF01343 Peptidase family S49 AB895_0589 PF13567 Domain of unknown function (DUF4131) AB895_0589 PF00753 Metallo-beta-lactamase superfamily AB895_0589 PF03772 Competence protein AB895_0590 PF00005 ABC transporter AB895_0591 PF12704 MacB-like periplasmic core domain AB895_0591 PF02687 FtsX-like permease family AB895_0593 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AB895_0595 PF00266 Aminotransferase class-V AB895_0597 PF13533 Biotin-lipoyl like AB895_0601 PF00535 Glycosyl transferase family 2 AB895_0604 PF00521 DNA gyrase/topoisomerase IV, subunit A AB895_0604 PF03989 DNA gyrase C-terminal domain, beta-propeller AB895_0605 PF01012 Electron transfer flavoprotein domain AB895_0605 PF00766 Electron transfer flavoprotein FAD-binding domain AB895_0606 PF01012 Electron transfer flavoprotein domain AB895_0607 PF00589 Phage integrase family AB895_0607 PF02899 Phage integrase, N-terminal SAM-like domain AB895_0608 PF01810 LysE type translocator AB895_0609 PF00561 alpha/beta hydrolase fold AB895_0610 PF01678 Diaminopimelate epimerase AB895_0611 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB895_0611 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AB895_0613 PF00324 Amino acid permease AB895_0615 PF18073 Rubredoxin metal binding domain AB895_0617 PF00152 tRNA synthetases class II (D, K and N) AB895_0618 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB895_0618 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB895_0618 PF11890 Domain of unknown function (DUF3410) AB895_0619 PF06803 Protein of unknown function (DUF1232) AB895_0620 PF02634 FdhD/NarQ family AB895_0621 PF00384 Molybdopterin oxidoreductase AB895_0622 PF02595 Glycerate kinase family AB895_0625 PF00881 Nitroreductase family AB895_0630 PF09857 Putative toxin of bacterial toxin-antitoxin pair AB895_0632 PF00501 AMP-binding enzyme AB895_0632 PF00975 Thioesterase domain AB895_0632 PF13193 AMP-binding enzyme C-terminal domain AB895_0632 PF00668 Condensation domain AB895_0632 PF00550 Phosphopantetheine attachment site AB895_0635 PF03449 Transcription elongation factor, N-terminal AB895_0635 PF01272 Transcription elongation factor, GreA/GreB, C-term AB895_0636 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB895_0636 PF01464 Transglycosylase SLT domain AB895_0638 PF01171 PP-loop family AB895_0639 PF01464 Transglycosylase SLT domain AB895_0640 PF01435 Peptidase family M48 AB895_0642 PF00873 AcrB/AcrD/AcrF family AB895_0643 PF03009 Glycerophosphoryl diester phosphodiesterase family AB895_0645 PF01219 Prokaryotic diacylglycerol kinase AB895_0646 PF00118 TCP-1/cpn60 chaperonin family AB895_0647 PF00166 Chaperonin 10 Kd subunit AB895_0648 PF00149 Calcineurin-like phosphoesterase AB895_0649 PF00781 Diacylglycerol kinase catalytic domain AB895_0650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AB895_0650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AB895_0651 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AB895_0651 PF01266 FAD dependent oxidoreductase AB895_0652 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB895_0652 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB895_0653 PF00083 Sugar (and other) transporter AB895_0656 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AB895_0656 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AB895_0659 PF16655 PhoD-like phosphatase, N-terminal domain AB895_0659 PF09423 PhoD-like phosphatase AB895_0663 PF00809 Pterin binding enzyme AB895_0664 PF17862 AAA+ lid domain AB895_0664 PF06480 FtsH Extracellular AB895_0664 PF00004 ATPase family associated with various cellular activities (AAA) AB895_0664 PF01434 Peptidase family M41 AB895_0665 PF01728 FtsJ-like methyltransferase AB895_0666 PF01985 CRS1 / YhbY (CRM) domain AB895_0669 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AB895_0669 PF00117 Glutamine amidotransferase class-I AB895_0670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB895_0670 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB895_0670 PF02142 MGS-like domain AB895_0671 PF03449 Transcription elongation factor, N-terminal AB895_0671 PF01272 Transcription elongation factor, GreA/GreB, C-term AB895_0672 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_0673 PF00582 Universal stress protein family AB895_0674 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB895_0676 PF09587 Bacterial capsule synthesis protein PGA_cap AB895_0679 PF00999 Sodium/hydrogen exchanger family AB895_0680 PF04228 Putative neutral zinc metallopeptidase AB895_0681 PF05661 Protein of unknown function (DUF808) AB895_0682 PF00579 tRNA synthetases class I (W and Y) AB895_0683 PF00549 CoA-ligase AB895_0683 PF02629 CoA binding domain AB895_0684 PF08442 ATP-grasp domain AB895_0684 PF00549 CoA-ligase AB895_0685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB895_0685 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_0686 PF02817 e3 binding domain AB895_0686 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB895_0686 PF00364 Biotin-requiring enzyme AB895_0687 PF02779 Transketolase, pyrimidine binding domain AB895_0687 PF16870 2-oxoglutarate dehydrogenase C-terminal AB895_0687 PF00676 Dehydrogenase E1 component AB895_0687 PF16078 2-oxoglutarate dehydrogenase N-terminus AB895_0688 PF13085 2Fe-2S iron-sulfur cluster binding domain AB895_0689 PF02910 Fumarate reductase flavoprotein C-term AB895_0689 PF00890 FAD binding domain AB895_0690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB895_0691 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB895_0692 PF00285 Citrate synthase, C-terminal domain AB895_0698 PF00140 Sigma-70 factor, region 1.2 AB895_0698 PF04542 Sigma-70 region 2 AB895_0698 PF04539 Sigma-70 region 3 AB895_0698 PF04545 Sigma-70, region 4 AB895_0698 PF03979 Sigma-70 factor, region 1.1 AB895_0698 PF04546 Sigma-70, non-essential region AB895_0699 PF04359 Protein of unknown function (DUF493) AB895_0700 PF03099 Biotin/lipoate A/B protein ligase family AB895_0702 PF00465 Iron-containing alcohol dehydrogenase AB895_0703 PF13520 Amino acid permease AB895_0704 PF03358 NADPH-dependent FMN reductase AB895_0705 PF01638 HxlR-like helix-turn-helix AB895_0706 PF00588 SpoU rRNA Methylase family AB895_0707 PF14824 Sirohaem biosynthesis protein central AB895_0707 PF10414 Sirohaem synthase dimerisation region AB895_0707 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB895_0708 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB895_0708 PF02403 Seryl-tRNA synthetase N-terminal domain AB895_0710 PF03548 Outer membrane lipoprotein carrier protein LolA AB895_0711 PF01016 Ribosomal L27 protein AB895_0712 PF00829 Ribosomal prokaryotic L21 protein AB895_0714 PF00348 Polyprenyl synthetase AB895_0716 PF01569 PAP2 superfamily AB895_0717 PF00529 HlyD membrane-fusion protein of T1SS AB895_0717 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_0718 PF00873 AcrB/AcrD/AcrF family AB895_0719 PF02321 Outer membrane efflux protein AB895_0720 PF01906 Putative heavy-metal-binding AB895_0721 PF01906 Putative heavy-metal-binding AB895_0725 PF10458 Valyl tRNA synthetase tRNA binding arm AB895_0725 PF08264 Anticodon-binding domain of tRNA AB895_0725 PF00133 tRNA synthetases class I (I, L, M and V) AB895_0729 PF03466 LysR substrate binding domain AB895_0729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_0730 PF00909 Ammonium Transporter Family AB895_0732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0732 PF00512 His Kinase A (phospho-acceptor) domain AB895_0732 PF08521 Two-component sensor kinase N-terminal AB895_0733 PF00486 Transcriptional regulatory protein, C terminal AB895_0733 PF00072 Response regulator receiver domain AB895_0734 PF00884 Sulfatase AB895_0734 PF08019 Phosphoethanolamine transferase EptA/EptB AB895_0738 PF01734 Patatin-like phospholipase AB895_0740 PF01145 SPFH domain / Band 7 family AB895_0741 PF04237 YjbR AB895_0742 PF00348 Polyprenyl synthetase AB895_0743 PF04303 PrpF protein AB895_0744 PF00324 Amino acid permease AB895_0746 PF01965 DJ-1/PfpI family AB895_0747 PF00698 Acyl transferase domain AB895_0747 PF14765 Polyketide synthase dehydratase AB895_0747 PF08240 Alcohol dehydrogenase GroES-like domain AB895_0747 PF08990 Erythronolide synthase docking AB895_0747 PF08659 KR domain AB895_0747 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_0747 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_0747 PF16197 Ketoacyl-synthetase C-terminal extension AB895_0747 PF09277 Erythronolide synthase, docking AB895_0747 PF00550 Phosphopantetheine attachment site AB895_0748 PF12833 Helix-turn-helix domain AB895_0748 PF06719 AraC-type transcriptional regulator N-terminus AB895_0749 PF02673 Bacitracin resistance protein BacA AB895_0753 PF02525 Flavodoxin-like fold AB895_0756 PF01507 Phosphoadenosine phosphosulfate reductase family AB895_0757 PF06974 Protein of unknown function (DUF1298) AB895_0757 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AB895_0759 PF00575 S1 RNA binding domain AB895_0759 PF10150 Ribonuclease E/G family AB895_0760 PF02545 Maf-like protein AB895_0762 PF04085 rod shape-determining protein MreC AB895_0764 PF02686 Glu-tRNAGln amidotransferase C subunit AB895_0765 PF01425 Amidase AB895_0766 PF02637 GatB domain AB895_0766 PF02934 GatB/GatE catalytic domain AB895_0773 PF01431 Peptidase family M13 AB895_0773 PF05649 Peptidase family M13 AB895_0774 PF05992 SbmA/BacA-like family AB895_0775 PF13291 ACT domain AB895_0775 PF00291 Pyridoxal-phosphate dependent enzyme AB895_0776 PF01734 Patatin-like phospholipase AB895_0777 PF01235 Sodium:alanine symporter family AB895_0780 PF00881 Nitroreductase family AB895_0781 PF07690 Major Facilitator Superfamily AB895_0782 PF12805 FUSC-like inner membrane protein yccS AB895_0784 PF00175 Oxidoreductase NAD-binding domain AB895_0784 PF00258 Flavodoxin AB895_0784 PF00667 FAD binding domain AB895_0792 PF17969 L,D-transpeptidase C-terminal domain AB895_0792 PF03734 L,D-transpeptidase catalytic domain AB895_0793 PF04304 Protein of unknown function (DUF454) AB895_0795 PF08085 Entericidin EcnA/B family AB895_0796 PF07687 Peptidase dimerisation domain AB895_0796 PF01546 Peptidase family M20/M25/M40 AB895_0798 PF01584 CheW-like domain AB895_0798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0798 PF01627 Hpt domain AB895_0798 PF00072 Response regulator receiver domain AB895_0799 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AB895_0799 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB895_0800 PF01584 CheW-like domain AB895_0801 PF00072 Response regulator receiver domain AB895_0802 PF00072 Response regulator receiver domain AB895_0803 PF13737 Transposase DDE domain AB895_0806 PF00873 AcrB/AcrD/AcrF family AB895_0807 PF04073 Aminoacyl-tRNA editing domain AB895_0807 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB895_0807 PF03129 Anticodon binding domain AB895_0808 PF07411 Domain of unknown function (DUF1508) AB895_0809 PF03831 PhnA domain AB895_0809 PF08274 PhnA Zinc-Ribbon AB895_0810 PF04343 Protein of unknown function, DUF488 AB895_0811 PF12697 Alpha/beta hydrolase family AB895_0812 PF00881 Nitroreductase family AB895_0813 PF00296 Luciferase-like monooxygenase AB895_0814 PF00857 Isochorismatase family AB895_0815 PF01042 Endoribonuclease L-PSP AB895_0816 PF01613 Flavin reductase like domain AB895_0817 PF00860 Permease family AB895_0818 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB895_0818 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB895_0820 PF01571 Aminomethyltransferase folate-binding domain AB895_0821 PF10411 Disulfide bond isomerase protein N-terminus AB895_0821 PF13098 Thioredoxin-like domain AB895_0823 PF03547 Membrane transport protein AB895_0824 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_0825 PF07715 TonB-dependent Receptor Plug Domain AB895_0825 PF00593 TonB dependent receptor AB895_0826 PF02245 Methylpurine-DNA glycosylase (MPG) AB895_0827 PF06827 Zinc finger found in FPG and IleRS AB895_0827 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB895_0827 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB895_0830 PF01741 Large-conductance mechanosensitive channel, MscL AB895_0833 PF00860 Permease family AB895_0834 PF08468 Methyltransferase small domain N-terminal AB895_0834 PF05175 Methyltransferase small domain AB895_0835 PF00324 Amino acid permease AB895_0836 PF01139 tRNA-splicing ligase RtcB AB895_0838 PF13505 Outer membrane protein beta-barrel domain AB895_0838 PF00691 OmpA family AB895_0840 PF00108 Thiolase, N-terminal domain AB895_0840 PF02803 Thiolase, C-terminal domain AB895_0842 PF00893 Small Multidrug Resistance protein AB895_0844 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB895_0844 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB895_0845 PF01011 PQQ enzyme repeat AB895_0847 PF04966 Carbohydrate-selective porin, OprB family AB895_0848 PF02515 CoA-transferase family III AB895_0849 PF02311 AraC-like ligand binding domain AB895_0849 PF12833 Helix-turn-helix domain AB895_0850 PF02803 Thiolase, C-terminal domain AB895_0850 PF00108 Thiolase, N-terminal domain AB895_0851 PF00378 Enoyl-CoA hydratase/isomerase AB895_0851 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB895_0851 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB895_0854 PF13673 Acetyltransferase (GNAT) domain AB895_0856 PF03006 Haemolysin-III related AB895_0857 PF07690 Major Facilitator Superfamily AB895_0857 PF00083 Sugar (and other) transporter AB895_0859 PF07516 SecA Wing and Scaffold domain AB895_0859 PF01043 SecA preprotein cross-linking domain AB895_0859 PF07517 SecA DEAD-like domain AB895_0859 PF02810 SEC-C motif AB895_0860 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB895_0860 PF00578 AhpC/TSA family AB895_0861 PF00753 Metallo-beta-lactamase superfamily AB895_0864 PF08245 Mur ligase middle domain AB895_0864 PF02875 Mur ligase family, glutamate ligase domain AB895_0865 PF01039 Carboxyl transferase domain AB895_0866 PF00290 Tryptophan synthase alpha chain AB895_0872 PF00291 Pyridoxal-phosphate dependent enzyme AB895_0873 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AB895_0874 PF07715 TonB-dependent Receptor Plug Domain AB895_0874 PF00593 TonB dependent receptor AB895_0875 PF01923 Cobalamin adenosyltransferase AB895_0879 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AB895_0880 PF00486 Transcriptional regulatory protein, C terminal AB895_0880 PF00072 Response regulator receiver domain AB895_0881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0881 PF00672 HAMP domain AB895_0881 PF00512 His Kinase A (phospho-acceptor) domain AB895_0883 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0883 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB895_0883 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0883 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0884 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB895_0884 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0884 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0884 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0885 PF06146 Phosphate-starvation-inducible E AB895_0889 PF07715 TonB-dependent Receptor Plug Domain AB895_0889 PF00593 TonB dependent receptor AB895_0892 PF01336 OB-fold nucleic acid binding domain AB895_0892 PF02938 GAD domain AB895_0892 PF00152 tRNA synthetases class II (D, K and N) AB895_0895 PF00535 Glycosyl transferase family 2 AB895_0896 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AB895_0897 PF00483 Nucleotidyl transferase AB895_0898 PF04321 RmlD substrate binding domain AB895_0899 PF16363 GDP-mannose 4,6 dehydratase AB895_0901 PF13439 Glycosyltransferase Family 4 AB895_0901 PF00534 Glycosyl transferases group 1 AB895_0902 PF01522 Polysaccharide deacetylase AB895_0904 PF01063 Amino-transferase class IV AB895_0905 PF03710 Glutamate-ammonia ligase adenylyltransferase AB895_0905 PF08335 GlnD PII-uridylyltransferase AB895_0906 PF07689 KaiB domain AB895_0906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_0906 PF00512 His Kinase A (phospho-acceptor) domain AB895_0909 PF11867 Domain of unknown function (DUF3387) AB895_0909 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AB895_0909 PF18766 SWI2/SNF2 ATPase AB895_0910 PF01527 Transposase AB895_0911 PF00665 Integrase core domain AB895_0911 PF13333 Integrase core domain AB895_0911 PF13276 HTH-like domain AB895_0912 PF18766 SWI2/SNF2 ATPase AB895_0912 PF11867 Domain of unknown function (DUF3387) AB895_0912 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AB895_0916 PF01420 Type I restriction modification DNA specificity domain AB895_0917 PF02384 N-6 DNA Methylase AB895_0919 PF01527 Transposase AB895_0920 PF13333 Integrase core domain AB895_0920 PF00665 Integrase core domain AB895_0920 PF13276 HTH-like domain AB895_0923 PF00872 Transposase, Mutator family AB895_0924 PF13356 Arm DNA-binding domain AB895_0924 PF00589 Phage integrase family AB895_0926 PF02547 Queuosine biosynthesis protein AB895_0930 PF01702 Queuine tRNA-ribosyltransferase AB895_0931 PF02699 Preprotein translocase subunit AB895_0932 PF13721 SecD export protein N-terminal TM region AB895_0932 PF07549 SecD/SecF GG Motif AB895_0932 PF02355 Protein export membrane protein AB895_0933 PF02355 Protein export membrane protein AB895_0933 PF07549 SecD/SecF GG Motif AB895_0934 PF04127 DNA / pantothenate metabolism flavoprotein AB895_0934 PF02441 Flavoprotein AB895_0935 PF04002 RadC-like JAB domain AB895_0936 PF01062 Bestrophin, RFP-TM, chloride channel AB895_0937 PF02811 PHP domain AB895_0938 PF04279 Intracellular septation protein A AB895_0939 PF03795 YCII-related domain AB895_0941 PF01266 FAD dependent oxidoreductase AB895_0941 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AB895_0943 PF04461 Protein of unknown function (DUF520) AB895_0945 PF03061 Thioesterase superfamily AB895_0946 PF00085 Thioredoxin AB895_0947 PF00561 alpha/beta hydrolase fold AB895_0948 PF04273 Putative phosphatase (DUF442) AB895_0948 PF00753 Metallo-beta-lactamase superfamily AB895_0950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB895_0950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_0958 PF00990 Diguanylate cyclase, GGDEF domain AB895_0958 PF17152 Periplasmic sensor domain AB895_0959 PF00691 OmpA family AB895_0959 PF01389 OmpA-like transmembrane domain AB895_0960 PF00149 Calcineurin-like phosphoesterase AB895_0960 PF10518 TAT (twin-arginine translocation) pathway signal sequence AB895_0961 PF13091 PLD-like domain AB895_0963 PF13167 GTP-binding GTPase N-terminal AB895_0963 PF16360 GTP-binding GTPase Middle Region AB895_0963 PF01926 50S ribosome-binding GTPase AB895_0967 PF00149 Calcineurin-like phosphoesterase AB895_0968 PF00398 Ribosomal RNA adenine dimethylase AB895_0969 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AB895_0970 PF00572 Ribosomal protein L13 AB895_0971 PF00380 Ribosomal protein S9/S16 AB895_0972 PF00043 Glutathione S-transferase, C-terminal domain AB895_0972 PF13417 Glutathione S-transferase, N-terminal domain AB895_0973 PF04386 Stringent starvation protein B AB895_0975 PF00289 Biotin carboxylase, N-terminal domain AB895_0975 PF00364 Biotin-requiring enzyme AB895_0975 PF02785 Biotin carboxylase C-terminal domain AB895_0975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB895_0977 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0977 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0977 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0978 PF01039 Carboxyl transferase domain AB895_0983 PF17932 Tetracyclin repressor-like, C-terminal domain AB895_0983 PF00440 Bacterial regulatory proteins, tetR family AB895_0984 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_0984 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_0984 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_0994 PF01066 CDP-alcohol phosphatidyltransferase AB895_0995 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AB895_0999 PF00056 lactate/malate dehydrogenase, NAD binding domain AB895_0999 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AB895_1001 PF01464 Transglycosylase SLT domain AB895_1001 PF10145 Phage-related minor tail protein AB895_1001 PF01551 Peptidase family M23 AB895_1002 PF00919 Uncharacterized protein family UPF0004 AB895_1002 PF01938 TRAM domain AB895_1002 PF04055 Radical SAM superfamily AB895_1003 PF02562 PhoH-like protein AB895_1004 PF02130 Uncharacterized protein family UPF0054 AB895_1009 PF03358 NADPH-dependent FMN reductase AB895_1010 PF03631 Virulence factor BrkB AB895_1011 PF00892 EamA-like transporter family AB895_1012 PF12833 Helix-turn-helix domain AB895_1013 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB895_1022 PF00773 RNB domain AB895_1022 PF08206 Ribonuclease B OB domain AB895_1022 PF08461 Ribonuclease R winged-helix domain AB895_1022 PF17876 Cold shock domain AB895_1022 PF00575 S1 RNA binding domain AB895_1023 PF01432 Peptidase family M3 AB895_1024 PF09526 Probable metal-binding protein (DUF2387) AB895_1030 PF03937 Flavinator of succinate dehydrogenase AB895_1031 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_1031 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_1031 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_1033 PF00743 Flavin-binding monooxygenase-like AB895_1034 PF01196 Ribosomal protein L17 AB895_1035 PF01000 RNA polymerase Rpb3/RpoA insert domain AB895_1035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AB895_1035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AB895_1036 PF00163 Ribosomal protein S4/S9 N-terminal domain AB895_1036 PF01479 S4 domain AB895_1037 PF00411 Ribosomal protein S11 AB895_1038 PF00416 Ribosomal protein S13/S18 AB895_1039 PF00444 Ribosomal protein L36 AB895_1040 PF00344 SecY translocase AB895_1041 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AB895_1042 PF00327 Ribosomal protein L30p/L7e AB895_1043 PF03719 Ribosomal protein S5, C-terminal domain AB895_1043 PF00333 Ribosomal protein S5, N-terminal domain AB895_1044 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AB895_1045 PF00347 Ribosomal protein L6 AB895_1046 PF00410 Ribosomal protein S8 AB895_1047 PF00253 Ribosomal protein S14p/S29e AB895_1048 PF00673 ribosomal L5P family C-terminus AB895_1048 PF00281 Ribosomal protein L5 AB895_1049 PF00467 KOW motif AB895_1049 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AB895_1050 PF00238 Ribosomal protein L14p/L23e AB895_1051 PF00366 Ribosomal protein S17 AB895_1052 PF00831 Ribosomal L29 protein AB895_1053 PF00252 Ribosomal protein L16p/L10e AB895_1054 PF00189 Ribosomal protein S3, C-terminal domain AB895_1054 PF07650 KH domain AB895_1055 PF00237 Ribosomal protein L22p/L17e AB895_1056 PF00203 Ribosomal protein S19 AB895_1057 PF00181 Ribosomal Proteins L2, RNA binding domain AB895_1057 PF03947 Ribosomal Proteins L2, C-terminal domain AB895_1058 PF00276 Ribosomal protein L23 AB895_1059 PF00573 Ribosomal protein L4/L1 family AB895_1060 PF00297 Ribosomal protein L3 AB895_1061 PF00338 Ribosomal protein S10p/S20e AB895_1062 PF00117 Glutamine amidotransferase class-I AB895_1063 PF01053 Cys/Met metabolism PLP-dependent enzyme AB895_1064 PF05872 Bacterial protein of unknown function (DUF853) AB895_1065 PF00970 Oxidoreductase FAD-binding domain AB895_1065 PF00175 Oxidoreductase NAD-binding domain AB895_1065 PF00042 Globin AB895_1066 PF02082 Transcriptional regulator AB895_1067 PF01926 50S ribosome-binding GTPase AB895_1069 PF00375 Sodium:dicarboxylate symporter family AB895_1071 PF01553 Acyltransferase AB895_1074 PF00271 Helicase conserved C-terminal domain AB895_1074 PF17191 RecG wedge domain AB895_1074 PF00270 DEAD/DEAH box helicase AB895_1075 PF00156 Phosphoribosyl transferase domain AB895_1076 PF00293 NUDIX domain AB895_1077 PF03641 Possible lysine decarboxylase AB895_1078 PF01544 CorA-like Mg2+ transporter protein AB895_1080 PF05494 MlaC protein AB895_1082 PF02405 Permease MlaE AB895_1083 PF00005 ABC transporter AB895_1085 PF00271 Helicase conserved C-terminal domain AB895_1085 PF03880 DbpA RNA binding domain AB895_1085 PF12343 Cold shock protein DEAD box A AB895_1085 PF00270 DEAD/DEAH box helicase AB895_1086 PF00459 Inositol monophosphatase family AB895_1087 PF02779 Transketolase, pyrimidine binding domain AB895_1087 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB895_1087 PF02780 Transketolase, C-terminal domain AB895_1088 PF00925 GTP cyclohydrolase II AB895_1089 PF01218 Coproporphyrinogen III oxidase AB895_1090 PF08501 Shikimate dehydrogenase substrate binding domain AB895_1090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AB895_1090 PF01488 Shikimate / quinate 5-dehydrogenase AB895_1092 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_1092 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_1092 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB895_1092 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_1094 PF04024 PspC domain AB895_1095 PF00571 CBS domain AB895_1100 PF02091 Glycyl-tRNA synthetase alpha subunit AB895_1101 PF02092 Glycyl-tRNA synthetase beta subunit AB895_1101 PF05746 DALR anticodon binding domain AB895_1102 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AB895_1105 PF00892 EamA-like transporter family AB895_1106 PF03466 LysR substrate binding domain AB895_1106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1111 PF13276 HTH-like domain AB895_1111 PF00665 Integrase core domain AB895_1111 PF13333 Integrase core domain AB895_1115 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AB895_1116 PF04996 Succinylarginine dihydrolase AB895_1117 PF00171 Aldehyde dehydrogenase family AB895_1118 PF04958 Arginine N-succinyltransferase beta subunit AB895_1119 PF00202 Aminotransferase class-III AB895_1120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB895_1120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB895_1122 PF00324 Amino acid permease AB895_1124 PF08241 Methyltransferase domain AB895_1128 PF13614 AAA domain AB895_1129 PF01594 AI-2E family transporter AB895_1130 PF00080 Copper/zinc superoxide dismutase (SODC) AB895_1131 PF12805 FUSC-like inner membrane protein yccS AB895_1132 PF07690 Major Facilitator Superfamily AB895_1134 PF02525 Flavodoxin-like fold AB895_1135 PF03992 Antibiotic biosynthesis monooxygenase AB895_1137 PF01565 FAD binding domain AB895_1137 PF02913 FAD linked oxidases, C-terminal domain AB895_1138 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB895_1138 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB895_1141 PF00892 EamA-like transporter family AB895_1142 PF00892 EamA-like transporter family AB895_1144 PF01925 Sulfite exporter TauE/SafE AB895_1145 PF16198 tRNA pseudouridylate synthase B C-terminal domain AB895_1145 PF01509 TruB family pseudouridylate synthase (N terminal domain) AB895_1145 PF09157 Pseudouridine synthase II TruB, C-terminal AB895_1146 PF03280 Proteobacterial lipase chaperone protein AB895_1147 PF00561 alpha/beta hydrolase fold AB895_1148 PF01245 Ribosomal protein L19 AB895_1149 PF01746 tRNA (Guanine-1)-methyltransferase AB895_1150 PF05239 PRC-barrel domain AB895_1150 PF01782 RimM N-terminal domain AB895_1151 PF00886 Ribosomal protein S16 AB895_1159 PF02401 LytB protein AB895_1160 PF00625 Guanylate kinase AB895_1161 PF01192 RNA polymerase Rpb6 AB895_1162 PF02824 TGS domain AB895_1162 PF04607 Region found in RelA / SpoT proteins AB895_1162 PF13291 ACT domain AB895_1163 PF01042 Endoribonuclease L-PSP AB895_1164 PF04324 BFD-like [2Fe-2S] binding domain AB895_1165 PF00210 Ferritin-like domain AB895_1166 PF11846 Virulence factor membrane-bound polymerase, C-terminal AB895_1166 PF15864 Protein glycosylation ligase AB895_1166 PF04932 O-Antigen ligase AB895_1168 PF00114 Pilin (bacterial filament) AB895_1168 PF07963 Prokaryotic N-terminal methylation motif AB895_1171 PF04536 TPM domain AB895_1172 PF04011 LemA family AB895_1174 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AB895_1174 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_1175 PF00310 Glutamine amidotransferases class-II AB895_1175 PF04898 Glutamate synthase central domain AB895_1175 PF01645 Conserved region in glutamate synthase AB895_1175 PF01493 GXGXG motif AB895_1177 PF01761 3-dehydroquinate synthase AB895_1178 PF01202 Shikimate kinase AB895_1179 PF00263 Bacterial type II and III secretion system protein AB895_1179 PF07660 Secretin and TonB N terminus short domain AB895_1179 PF11741 AMIN domain AB895_1179 PF03958 Bacterial type II/III secretion system short domain AB895_1184 PF17092 Penicillin-binding protein OB-like domain AB895_1184 PF00912 Transglycosylase AB895_1184 PF00905 Penicillin binding protein transpeptidase domain AB895_1185 PF13847 Methyltransferase domain AB895_1187 PF00953 Glycosyl transferase family 4 AB895_1188 PF01225 Mur ligase family, catalytic domain AB895_1188 PF02875 Mur ligase family, glutamate ligase domain AB895_1188 PF08245 Mur ligase middle domain AB895_1189 PF02875 Mur ligase family, glutamate ligase domain AB895_1189 PF01225 Mur ligase family, catalytic domain AB895_1189 PF08245 Mur ligase middle domain AB895_1190 PF00905 Penicillin binding protein transpeptidase domain AB895_1190 PF03717 Penicillin-binding Protein dimerisation domain AB895_1192 PF01795 MraW methylase family AB895_1195 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB895_1198 PF00324 Amino acid permease AB895_1204 PF01545 Cation efflux family AB895_1205 PF00873 AcrB/AcrD/AcrF family AB895_1206 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_1206 PF00529 HlyD membrane-fusion protein of T1SS AB895_1212 PF00005 ABC transporter AB895_1212 PF12848 ABC transporter AB895_1213 PF01053 Cys/Met metabolism PLP-dependent enzyme AB895_1214 PF00106 short chain dehydrogenase AB895_1215 PF01740 STAS domain AB895_1215 PF00916 Sulfate permease family AB895_1216 PF16921 Tex protein YqgF-like domain AB895_1216 PF09371 Tex-like protein N-terminal domain AB895_1216 PF17674 HHH domain AB895_1216 PF00575 S1 RNA binding domain AB895_1217 PF00486 Transcriptional regulatory protein, C terminal AB895_1217 PF00072 Response regulator receiver domain AB895_1218 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1218 PF00672 HAMP domain AB895_1218 PF00512 His Kinase A (phospho-acceptor) domain AB895_1219 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AB895_1219 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AB895_1220 PF00583 Acetyltransferase (GNAT) family AB895_1224 PF00475 Imidazoleglycerol-phosphate dehydratase AB895_1225 PF00117 Glutamine amidotransferase class-I AB895_1228 PF00977 Histidine biosynthesis protein AB895_1231 PF03992 Antibiotic biosynthesis monooxygenase AB895_1234 PF01636 Phosphotransferase enzyme family AB895_1235 PF00977 Histidine biosynthesis protein AB895_1238 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_1239 PF00230 Major intrinsic protein AB895_1247 PF02705 K+ potassium transporter AB895_1249 PF13356 Arm DNA-binding domain AB895_1249 PF00589 Phage integrase family AB895_1250 PF00589 Phage integrase family AB895_1250 PF13356 Arm DNA-binding domain AB895_1253 PF01555 DNA methylase AB895_1253 PF18273 Type III R-M EcoP15I C-terminal domain AB895_1255 PF00665 Integrase core domain AB895_1255 PF13276 HTH-like domain AB895_1255 PF13333 Integrase core domain AB895_1256 PF01527 Transposase AB895_1258 PF13737 Transposase DDE domain AB895_1264 PF02311 AraC-like ligand binding domain AB895_1264 PF12833 Helix-turn-helix domain AB895_1265 PF00248 Aldo/keto reductase family AB895_1269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1269 PF03466 LysR substrate binding domain AB895_1270 PF07690 Major Facilitator Superfamily AB895_1274 PF01593 Flavin containing amine oxidoreductase AB895_1276 PF05726 Pirin C-terminal cupin domain AB895_1276 PF02678 Pirin AB895_1277 PF00857 Isochorismatase family AB895_1278 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1279 PF00171 Aldehyde dehydrogenase family AB895_1280 PF00202 Aminotransferase class-III AB895_1281 PF00155 Aminotransferase class I and II AB895_1281 PF00392 Bacterial regulatory proteins, gntR family AB895_1282 PF00324 Amino acid permease AB895_1284 PF03591 AzlC protein AB895_1286 PF00436 Single-strand binding protein family AB895_1287 PF07690 Major Facilitator Superfamily AB895_1289 PF02581 Thiamine monophosphate synthase AB895_1289 PF03070 TENA/THI-4/PQQC family AB895_1289 PF08543 Phosphomethylpyrimidine kinase AB895_1290 PF06942 GlpM protein AB895_1292 PF08240 Alcohol dehydrogenase GroES-like domain AB895_1292 PF00107 Zinc-binding dehydrogenase AB895_1293 PF00440 Bacterial regulatory proteins, tetR family AB895_1293 PF16925 Tetracyclin repressor-like, C-terminal domain AB895_1294 PF00005 ABC transporter AB895_1294 PF17755 UvrA DNA-binding domain AB895_1294 PF17760 UvrA interaction domain AB895_1295 PF00990 Diguanylate cyclase, GGDEF domain AB895_1295 PF17158 Membrane-associated sensor, integral membrane domain AB895_1297 PF02028 BCCT, betaine/carnitine/choline family transporter AB895_1299 PF00474 Sodium:solute symporter family AB895_1300 PF04341 Protein of unknown function, DUF485 AB895_1301 PF00072 Response regulator receiver domain AB895_1301 PF01627 Hpt domain AB895_1301 PF00512 His Kinase A (phospho-acceptor) domain AB895_1301 PF00672 HAMP domain AB895_1301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1303 PF00072 Response regulator receiver domain AB895_1303 PF00196 Bacterial regulatory proteins, luxR family AB895_1304 PF03358 NADPH-dependent FMN reductase AB895_1305 PF00296 Luciferase-like monooxygenase AB895_1306 PF01037 Lrp/AsnC ligand binding domain AB895_1307 PF00857 Isochorismatase family AB895_1308 PF00501 AMP-binding enzyme AB895_1308 PF13193 AMP-binding enzyme C-terminal domain AB895_1308 PF16177 Acetyl-coenzyme A synthetase N-terminus AB895_1311 PF00924 Mechanosensitive ion channel AB895_1312 PF04452 RNA methyltransferase AB895_1313 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AB895_1314 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_1317 PF03462 PCRF domain AB895_1317 PF00472 RF-1 domain AB895_1319 PF17768 RecJ OB domain AB895_1319 PF02272 DHHA1 domain AB895_1319 PF01368 DHH family AB895_1320 PF01243 Pyridoxamine 5'-phosphate oxidase AB895_1320 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AB895_1321 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB895_1321 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB895_1321 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB895_1321 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB895_1322 PF00478 IMP dehydrogenase / GMP reductase domain AB895_1322 PF00571 CBS domain AB895_1323 PF03692 Putative zinc- or iron-chelating domain AB895_1324 PF01613 Flavin reductase like domain AB895_1324 PF00258 Flavodoxin AB895_1325 PF01169 Uncharacterized protein family UPF0016 AB895_1327 PF00364 Biotin-requiring enzyme AB895_1327 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB895_1327 PF02817 e3 binding domain AB895_1328 PF17831 Pyruvate dehydrogenase E1 component middle domain AB895_1328 PF00456 Transketolase, thiamine diphosphate binding domain AB895_1329 PF01551 Peptidase family M23 AB895_1331 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AB895_1332 PF12327 FtsZ family, C-terminal domain AB895_1332 PF00091 Tubulin/FtsZ family, GTPase domain AB895_1333 PF02491 SHS2 domain inserted in FTSA AB895_1334 PF03799 Cell division protein FtsQ AB895_1334 PF08478 POTRA domain, FtsQ-type AB895_1335 PF01820 D-ala D-ala ligase N-terminus AB895_1335 PF07478 D-ala D-ala ligase C-terminus AB895_1336 PF08245 Mur ligase middle domain AB895_1336 PF02875 Mur ligase family, glutamate ligase domain AB895_1336 PF01225 Mur ligase family, catalytic domain AB895_1337 PF03033 Glycosyltransferase family 28 N-terminal domain AB895_1337 PF04101 Glycosyltransferase family 28 C-terminal domain AB895_1338 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AB895_1338 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AB895_1340 PF07715 TonB-dependent Receptor Plug Domain AB895_1340 PF00593 TonB dependent receptor AB895_1343 PF00156 Phosphoribosyl transferase domain AB895_1344 PF03372 Endonuclease/Exonuclease/phosphatase family AB895_1345 PF03960 ArsC family AB895_1347 PF07859 alpha/beta hydrolase fold AB895_1348 PF17151 Periplasmic sensor domain AB895_1348 PF00990 Diguanylate cyclase, GGDEF domain AB895_1349 PF11412 Disulphide bond corrector protein DsbC AB895_1349 PF02683 Cytochrome C biogenesis protein transmembrane region AB895_1355 PF00576 HIUase/Transthyretin family AB895_1356 PF00860 Permease family AB895_1358 PF01494 FAD binding domain AB895_1359 PF03561 Allantoicase repeat AB895_1360 PF04115 Ureidoglycolate lyase AB895_1361 PF00106 short chain dehydrogenase AB895_1363 PF00204 DNA gyrase B AB895_1363 PF00986 DNA gyrase B subunit, carboxyl terminus AB895_1363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1363 PF01751 Toprim domain AB895_1364 PF05728 Uncharacterised protein family (UPF0227) AB895_1369 PF13737 Transposase DDE domain AB895_1371 PF13737 Transposase DDE domain AB895_1372 PF04717 Type VI secretion system, phage-baseplate injector AB895_1373 PF02600 Disulfide bond formation protein DsbB AB895_1374 PF04262 Glutamate-cysteine ligase AB895_1377 PF04286 Protein of unknown function (DUF445) AB895_1378 PF00155 Aminotransferase class I and II AB895_1379 PF01554 MatE AB895_1380 PF00106 short chain dehydrogenase AB895_1382 PF00072 Response regulator receiver domain AB895_1382 PF00486 Transcriptional regulatory protein, C terminal AB895_1383 PF00989 PAS fold AB895_1383 PF00512 His Kinase A (phospho-acceptor) domain AB895_1383 PF11808 Phosphate regulon sensor protein PhoR AB895_1383 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1385 PF02666 Phosphatidylserine decarboxylase AB895_1386 PF00581 Rhodanese-like domain AB895_1387 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB895_1387 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AB895_1389 PF00199 Catalase AB895_1389 PF06628 Catalase-related immune-responsive AB895_1390 PF02580 D-Tyr-tRNA(Tyr) deacylase AB895_1395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB895_1395 PF00925 GTP cyclohydrolase II AB895_1396 PF00885 6,7-dimethyl-8-ribityllumazine synthase AB895_1397 PF01029 NusB family AB895_1398 PF02769 AIR synthase related protein, C-terminal domain AB895_1398 PF00586 AIR synthase related protein, N-terminal domain AB895_1400 PF04608 Phosphatidylglycerophosphatase A AB895_1401 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_1401 PF14602 Hexapeptide repeat of succinyl-transferase AB895_1401 PF12804 MobA-like NTP transferase domain AB895_1402 PF01380 SIS domain AB895_1405 PF16861 Carbamoyltransferase C-terminus AB895_1405 PF02543 Carbamoyltransferase N-terminus AB895_1409 PF01177 Asp/Glu/Hydantoin racemase AB895_1410 PF00491 Arginase family AB895_1411 PF01979 Amidohydrolase family AB895_1412 PF00324 Amino acid permease AB895_1413 PF00221 Aromatic amino acid lyase AB895_1414 PF01175 Urocanase Rossmann-like domain AB895_1414 PF17391 Urocanase N-terminal domain AB895_1414 PF17392 Urocanase C-terminal domain AB895_1415 PF05962 HutD AB895_1416 PF00392 Bacterial regulatory proteins, gntR family AB895_1416 PF07702 UTRA domain AB895_1418 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB895_1418 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB895_1420 PF00324 Amino acid permease AB895_1422 PF14497 Glutathione S-transferase, C-terminal domain AB895_1422 PF02798 Glutathione S-transferase, N-terminal domain AB895_1423 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB895_1425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB895_1426 PF04463 Protein of unknown function (DUF523) AB895_1427 PF01554 MatE AB895_1428 PF01758 Sodium Bile acid symporter family AB895_1429 PF00857 Isochorismatase family AB895_1430 PF00701 Dihydrodipicolinate synthetase family AB895_1432 PF01259 SAICAR synthetase AB895_1434 PF01226 Formate/nitrite transporter AB895_1435 PF12002 MgsA AAA+ ATPase C terminal AB895_1435 PF16193 AAA C-terminal domain AB895_1435 PF00004 ATPase family associated with various cellular activities (AAA) AB895_1436 PF07995 Glucose / Sorbosone dehydrogenase AB895_1437 PF03692 Putative zinc- or iron-chelating domain AB895_1439 PF07043 Protein of unknown function (DUF1328) AB895_1442 PF14815 NUDIX domain AB895_1442 PF00730 HhH-GPD superfamily base excision DNA repair protein AB895_1442 PF00633 Helix-hairpin-helix motif AB895_1442 PF10576 Iron-sulfur binding domain of endonuclease III AB895_1445 PF03352 Methyladenine glycosylase AB895_1446 PF08240 Alcohol dehydrogenase GroES-like domain AB895_1446 PF00107 Zinc-binding dehydrogenase AB895_1447 PF00392 Bacterial regulatory proteins, gntR family AB895_1447 PF00155 Aminotransferase class I and II AB895_1449 PF07690 Major Facilitator Superfamily AB895_1451 PF05173 Dihydrodipicolinate reductase, C-terminus AB895_1451 PF01113 Dihydrodipicolinate reductase, N-terminus AB895_1453 PF01556 DnaJ C terminal domain AB895_1453 PF00226 DnaJ domain AB895_1453 PF00684 DnaJ central domain AB895_1455 PF00873 AcrB/AcrD/AcrF family AB895_1456 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_1457 PF08361 MAATS-type transcriptional repressor, C-terminal region AB895_1457 PF00440 Bacterial regulatory proteins, tetR family AB895_1458 PF00311 Phosphoenolpyruvate carboxylase AB895_1459 PF00860 Permease family AB895_1460 PF03466 LysR substrate binding domain AB895_1460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1463 PF00920 Dehydratase family AB895_1464 PF02911 Formyl transferase, C-terminal domain AB895_1464 PF00551 Formyl transferase AB895_1465 PF01189 16S rRNA methyltransferase RsmB/F AB895_1465 PF01029 NusB family AB895_1467 PF00209 Sodium:neurotransmitter symporter family AB895_1477 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB895_1478 PF07859 alpha/beta hydrolase fold AB895_1483 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1483 PF03466 LysR substrate binding domain AB895_1484 PF01025 GrpE AB895_1485 PF00012 Hsp70 protein AB895_1489 PF13406 Transglycosylase SLT domain AB895_1490 PF02222 ATP-grasp domain AB895_1490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AB895_1491 PF00731 AIR carboxylase AB895_1494 PF08245 Mur ligase middle domain AB895_1494 PF02875 Mur ligase family, glutamate ligase domain AB895_1494 PF01225 Mur ligase family, catalytic domain AB895_1496 PF01569 PAP2 superfamily AB895_1497 PF03741 Integral membrane protein TerC family AB895_1499 PF03738 Glutathionylspermidine synthase preATP-grasp AB895_1500 PF00355 Rieske [2Fe-2S] domain AB895_1501 PF01979 Amidohydrolase family AB895_1503 PF00156 Phosphoribosyl transferase domain AB895_1505 PF13098 Thioredoxin-like domain AB895_1505 PF10411 Disulfide bond isomerase protein N-terminus AB895_1506 PF16916 Dimerisation domain of Zinc Transporter AB895_1506 PF01545 Cation efflux family AB895_1507 PF02583 Metal-sensitive transcriptional repressor AB895_1508 PF10396 GTP-binding protein TrmE N-terminus AB895_1508 PF01926 50S ribosome-binding GTPase AB895_1508 PF12631 MnmE helical domain AB895_1509 PF14849 YidC periplasmic domain AB895_1509 PF02096 60Kd inner membrane protein AB895_1510 PF01809 Putative membrane protein insertion efficiency factor AB895_1511 PF00825 Ribonuclease P AB895_1512 PF00468 Ribosomal protein L34 AB895_1513 PF08299 Bacterial dnaA protein helix-turn-helix AB895_1513 PF11638 DnaA N-terminal domain AB895_1513 PF00308 Bacterial dnaA protein AB895_1514 PF02767 DNA polymerase III beta subunit, central domain AB895_1514 PF02768 DNA polymerase III beta subunit, C-terminal domain AB895_1514 PF00712 DNA polymerase III beta subunit, N-terminal domain AB895_1515 PF02463 RecF/RecN/SMC N terminal domain AB895_1516 PF00204 DNA gyrase B AB895_1516 PF00986 DNA gyrase B subunit, carboxyl terminus AB895_1516 PF18053 DNA gyrase B subunit insert domain AB895_1516 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1516 PF01751 Toprim domain AB895_1518 PF09335 SNARE associated Golgi protein AB895_1519 PF00005 ABC transporter AB895_1519 PF12848 ABC transporter AB895_1523 PF01521 Iron-sulphur cluster biosynthesis AB895_1524 PF00561 alpha/beta hydrolase fold AB895_1525 PF03702 Anhydro-N-acetylmuramic acid kinase AB895_1526 PF00579 tRNA synthetases class I (W and Y) AB895_1535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_1536 PF01252 Signal peptidase (SPase) II AB895_1537 PF06827 Zinc finger found in FPG and IleRS AB895_1537 PF08264 Anticodon-binding domain of tRNA AB895_1537 PF00133 tRNA synthetases class I (I, L, M and V) AB895_1538 PF06574 FAD synthetase AB895_1538 PF01687 Riboflavin kinase AB895_1540 PF01048 Phosphorylase superfamily AB895_1541 PF08362 YcdC-like protein, C-terminal region AB895_1541 PF00440 Bacterial regulatory proteins, tetR family AB895_1542 PF00005 ABC transporter AB895_1543 PF00528 Binding-protein-dependent transport system inner membrane component AB895_1544 PF00296 Luciferase-like monooxygenase AB895_1545 PF09084 NMT1/THI5 like AB895_1546 PF09084 NMT1/THI5 like AB895_1547 PF00583 Acetyltransferase (GNAT) family AB895_1547 PF00696 Amino acid kinase family AB895_1550 PF00106 short chain dehydrogenase AB895_1551 PF13419 Haloacid dehalogenase-like hydrolase AB895_1553 PF01323 DSBA-like thioredoxin domain AB895_1554 PF08360 QacR-like protein, C-terminal region AB895_1554 PF00440 Bacterial regulatory proteins, tetR family AB895_1555 PF00440 Bacterial regulatory proteins, tetR family AB895_1556 PF00175 Oxidoreductase NAD-binding domain AB895_1557 PF00487 Fatty acid desaturase AB895_1558 PF01138 3' exoribonuclease family, domain 1 AB895_1558 PF03725 3' exoribonuclease family, domain 2 AB895_1559 PF05506 Domain of unknown function (DUF756) AB895_1559 PF04185 Phosphoesterase family AB895_1561 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AB895_1561 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AB895_1562 PF01510 N-acetylmuramoyl-L-alanine amidase AB895_1563 PF03023 Lipid II flippase MurJ AB895_1564 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_1564 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB895_1565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_1565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB895_1566 PF02706 Chain length determinant protein AB895_1566 PF13807 G-rich domain on putative tyrosine kinase AB895_1566 PF13614 AAA domain AB895_1567 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB895_1568 PF10531 SLBB domain AB895_1568 PF02563 Polysaccharide biosynthesis/export protein AB895_1568 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AB895_1569 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB895_1569 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB895_1569 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB895_1570 PF16363 GDP-mannose 4,6 dehydratase AB895_1571 PF04321 RmlD substrate binding domain AB895_1572 PF00483 Nucleotidyl transferase AB895_1573 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AB895_1574 PF01943 Polysaccharide biosynthesis protein AB895_1575 PF02350 UDP-N-acetylglucosamine 2-epimerase AB895_1578 PF00535 Glycosyl transferase family 2 AB895_1580 PF02397 Bacterial sugar transferase AB895_1581 PF00483 Nucleotidyl transferase AB895_1582 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB895_1582 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB895_1582 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB895_1583 PF00342 Phosphoglucose isomerase AB895_1585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB895_1585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB895_1585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB895_1585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB895_1586 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB895_1586 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB895_1586 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB895_1586 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB895_1587 PF02652 L-lactate permease AB895_1588 PF07729 FCD domain AB895_1588 PF00392 Bacterial regulatory proteins, gntR family AB895_1589 PF01070 FMN-dependent dehydrogenase AB895_1590 PF09330 D-lactate dehydrogenase, membrane binding AB895_1590 PF01565 FAD binding domain AB895_1591 PF00155 Aminotransferase class I and II AB895_1593 PF00392 Bacterial regulatory proteins, gntR family AB895_1593 PF07729 FCD domain AB895_1595 PF00285 Citrate synthase, C-terminal domain AB895_1596 PF00330 Aconitase family (aconitate hydratase) AB895_1596 PF00694 Aconitase C-terminal domain AB895_1603 PF00849 RNA pseudouridylate synthase AB895_1606 PF07715 TonB-dependent Receptor Plug Domain AB895_1606 PF00593 TonB dependent receptor AB895_1608 PF01037 Lrp/AsnC ligand binding domain AB895_1609 PF01266 FAD dependent oxidoreductase AB895_1610 PF00842 Alanine racemase, C-terminal domain AB895_1610 PF01168 Alanine racemase, N-terminal domain AB895_1611 PF01042 Endoribonuclease L-PSP AB895_1612 PF00324 Amino acid permease AB895_1613 PF00324 Amino acid permease AB895_1614 PF00324 Amino acid permease AB895_1616 PF13333 Integrase core domain AB895_1616 PF13276 HTH-like domain AB895_1616 PF00665 Integrase core domain AB895_1617 PF13276 HTH-like domain AB895_1617 PF00665 Integrase core domain AB895_1618 PF01527 Transposase AB895_1621 PF12419 SNF2 Helicase protein AB895_1621 PF00176 SNF2 family N-terminal domain AB895_1621 PF00271 Helicase conserved C-terminal domain AB895_1623 PF01695 IstB-like ATP binding protein AB895_1624 PF07120 Protein of unknown function (DUF1376) AB895_1631 PF01722 BolA-like protein AB895_1633 PF13614 AAA domain AB895_1636 PF09335 SNARE associated Golgi protein AB895_1637 PF07681 DoxX AB895_1638 PF04286 Protein of unknown function (DUF445) AB895_1639 PF02540 NAD synthase AB895_1639 PF00117 Glutamine amidotransferase class-I AB895_1639 PF00958 GMP synthase C terminal domain AB895_1640 PF13427 Domain of unknown function (DUF4111) AB895_1640 PF01909 Nucleotidyltransferase domain AB895_1641 PF03551 Transcriptional regulator PadR-like family AB895_1643 PF02678 Pirin AB895_1643 PF05726 Pirin C-terminal cupin domain AB895_1647 PF03485 Arginyl tRNA synthetase N terminal domain AB895_1647 PF05746 DALR anticodon binding domain AB895_1647 PF00750 tRNA synthetases class I (R) AB895_1648 PF03949 Malic enzyme, NAD binding domain AB895_1648 PF00390 Malic enzyme, N-terminal domain AB895_1649 PF04261 Dyp-type peroxidase family AB895_1650 PF01810 LysE type translocator AB895_1651 PF00950 ABC 3 transport family AB895_1652 PF00005 ABC transporter AB895_1656 PF00119 ATP synthase A chain AB895_1657 PF00137 ATP synthase subunit C AB895_1658 PF00430 ATP synthase B/B' CF(0) AB895_1659 PF00213 ATP synthase delta (OSCP) subunit AB895_1660 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB895_1660 PF00306 ATP synthase alpha/beta chain, C terminal domain AB895_1660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB895_1661 PF00231 ATP synthase AB895_1662 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB895_1662 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB895_1663 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AB895_1665 PF00255 Glutathione peroxidase AB895_1667 PF07690 Major Facilitator Superfamily AB895_1668 PF00440 Bacterial regulatory proteins, tetR family AB895_1669 PF00892 EamA-like transporter family AB895_1670 PF01300 Telomere recombination AB895_1671 PF02481 DNA recombination-mediator protein A AB895_1671 PF17782 DprA winged helix domain AB895_1673 PF01327 Polypeptide deformylase AB895_1678 PF00440 Bacterial regulatory proteins, tetR family AB895_1688 PF00291 Pyridoxal-phosphate dependent enzyme AB895_1690 PF03358 NADPH-dependent FMN reductase AB895_1694 PF08497 Radical SAM N-terminal AB895_1694 PF04055 Radical SAM superfamily AB895_1694 PF11842 Domain of unknown function (DUF3362) AB895_1697 PF11798 IMS family HHH motif AB895_1697 PF11799 impB/mucB/samB family C-terminal domain AB895_1697 PF00817 impB/mucB/samB family AB895_1699 PF07690 Major Facilitator Superfamily AB895_1700 PF03641 Possible lysine decarboxylase AB895_1701 PF03471 Transporter associated domain AB895_1701 PF03741 Integral membrane protein TerC family AB895_1702 PF02810 SEC-C motif AB895_1703 PF03458 UPF0126 domain AB895_1704 PF07690 Major Facilitator Superfamily AB895_1705 PF00521 DNA gyrase/topoisomerase IV, subunit A AB895_1705 PF03989 DNA gyrase C-terminal domain, beta-propeller AB895_1706 PF13193 AMP-binding enzyme C-terminal domain AB895_1706 PF00501 AMP-binding enzyme AB895_1709 PF00719 Inorganic pyrophosphatase AB895_1710 PF03573 outer membrane porin, OprD family AB895_1713 PF00701 Dihydrodipicolinate synthetase family AB895_1715 PF00392 Bacterial regulatory proteins, gntR family AB895_1715 PF00155 Aminotransferase class I and II AB895_1716 PF01078 Magnesium chelatase, subunit ChlI AB895_1716 PF13335 Magnesium chelatase, subunit ChlI C-terminal AB895_1718 PF00543 Nitrogen regulatory protein P-II AB895_1719 PF00909 Ammonium Transporter Family AB895_1720 PF03477 ATP cone domain AB895_1721 PF01872 RibD C-terminal domain AB895_1721 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB895_1723 PF00677 Lumazine binding domain AB895_1727 PF02789 Cytosol aminopeptidase family, N-terminal domain AB895_1727 PF00883 Cytosol aminopeptidase family, catalytic domain AB895_1729 PF03739 Lipopolysaccharide export system permease LptF/LptG AB895_1730 PF01676 Metalloenzyme superfamily AB895_1730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AB895_1731 PF00595 PDZ domain AB895_1731 PF03572 Peptidase family S41 AB895_1732 PF00158 Sigma-54 interaction domain AB895_1732 PF00072 Response regulator receiver domain AB895_1732 PF02954 Bacterial regulatory protein, Fis family AB895_1733 PF00512 His Kinase A (phospho-acceptor) domain AB895_1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1734 PF00072 Response regulator receiver domain AB895_1734 PF00196 Bacterial regulatory proteins, luxR family AB895_1735 PF00768 D-alanyl-D-alanine carboxypeptidase AB895_1736 PF00291 Pyridoxal-phosphate dependent enzyme AB895_1737 PF03447 Homoserine dehydrogenase, NAD binding domain AB895_1737 PF01842 ACT domain AB895_1737 PF00742 Homoserine dehydrogenase AB895_1738 PF13098 Thioredoxin-like domain AB895_1738 PF10411 Disulfide bond isomerase protein N-terminus AB895_1739 PF02899 Phage integrase, N-terminal SAM-like domain AB895_1739 PF00589 Phage integrase family AB895_1741 PF07664 Ferrous iron transport protein B C terminus AB895_1741 PF02421 Ferrous iron transport protein B AB895_1741 PF07670 Nucleoside recognition AB895_1743 PF08245 Mur ligase middle domain AB895_1743 PF02875 Mur ligase family, glutamate ligase domain AB895_1744 PF01098 Cell cycle protein AB895_1745 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB895_1746 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB895_1747 PF00149 Calcineurin-like phosphoesterase AB895_1748 PF00293 NUDIX domain AB895_1749 PF01964 Radical SAM ThiC family AB895_1749 PF13667 ThiC-associated domain AB895_1752 PF00892 EamA-like transporter family AB895_1753 PF02321 Outer membrane efflux protein AB895_1754 PF01895 PhoU domain AB895_1755 PF04362 Bacterial Fe(2+) trafficking AB895_1756 PF00206 Lyase AB895_1756 PF14698 Argininosuccinate lyase C-terminal AB895_1757 PF07694 5TMR of 5TMR-LYT AB895_1757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1757 PF06580 Histidine kinase AB895_1758 PF04397 LytTr DNA-binding domain AB895_1758 PF00072 Response regulator receiver domain AB895_1759 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AB895_1759 PF03900 Porphobilinogen deaminase, C-terminal domain AB895_1764 PF00816 H-NS histone family AB895_1767 PF03958 Bacterial type II/III secretion system short domain AB895_1767 PF00263 Bacterial type II and III secretion system protein AB895_1768 PF00498 FHA domain AB895_1768 PF12401 Protein of unknown function (DUF2662) AB895_1769 PF13419 Haloacid dehalogenase-like hydrolase AB895_1770 PF00425 chorismate binding enzyme AB895_1770 PF04715 Anthranilate synthase component I, N terminal region AB895_1775 PF03143 Elongation factor Tu C-terminal domain AB895_1775 PF00009 Elongation factor Tu GTP binding domain AB895_1775 PF03144 Elongation factor Tu domain 2 AB895_1777 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AB895_1778 PF02357 Transcription termination factor nusG AB895_1778 PF00467 KOW motif AB895_1779 PF03946 Ribosomal protein L11, N-terminal domain AB895_1779 PF00298 Ribosomal protein L11, RNA binding domain AB895_1780 PF00687 Ribosomal protein L1p/L10e family AB895_1781 PF00466 Ribosomal protein L10 AB895_1782 PF00542 Ribosomal protein L7/L12 C-terminal domain AB895_1782 PF16320 Ribosomal protein L7/L12 dimerisation domain AB895_1783 PF04565 RNA polymerase Rpb2, domain 3 AB895_1783 PF10385 RNA polymerase beta subunit external 1 domain AB895_1783 PF00562 RNA polymerase Rpb2, domain 6 AB895_1783 PF04560 RNA polymerase Rpb2, domain 7 AB895_1783 PF04563 RNA polymerase beta subunit AB895_1783 PF04561 RNA polymerase Rpb2, domain 2 AB895_1784 PF04983 RNA polymerase Rpb1, domain 3 AB895_1784 PF04997 RNA polymerase Rpb1, domain 1 AB895_1784 PF00623 RNA polymerase Rpb1, domain 2 AB895_1784 PF05000 RNA polymerase Rpb1, domain 4 AB895_1784 PF04998 RNA polymerase Rpb1, domain 5 AB895_1788 PF00561 alpha/beta hydrolase fold AB895_1789 PF03553 Na+/H+ antiporter family AB895_1789 PF13726 Na+-H+ antiporter family AB895_1792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_1792 PF00183 Hsp90 protein AB895_1795 PF01323 DSBA-like thioredoxin domain AB895_1797 PF00376 MerR family regulatory protein AB895_1797 PF09278 MerR, DNA binding AB895_1801 PF00108 Thiolase, N-terminal domain AB895_1801 PF02803 Thiolase, C-terminal domain AB895_1802 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB895_1802 PF00378 Enoyl-CoA hydratase/isomerase AB895_1802 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB895_1805 PF01541 GIY-YIG catalytic domain AB895_1805 PF02151 UvrB/uvrC motif AB895_1805 PF08459 UvrC Helix-hairpin-helix N-terminal AB895_1807 PF01066 CDP-alcohol phosphatidyltransferase AB895_1808 PF12833 Helix-turn-helix domain AB895_1808 PF02805 Metal binding domain of Ada AB895_1808 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB895_1808 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB895_1813 PF13533 Biotin-lipoyl like AB895_1814 PF03652 Holliday junction resolvase AB895_1815 PF02622 Uncharacterized ACR, COG1678 AB895_1816 PF02463 RecF/RecN/SMC N terminal domain AB895_1818 PF06865 Pyrimidine/purine nucleoside phosphorylase AB895_1819 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB895_1819 PF00588 SpoU rRNA Methylase family AB895_1821 PF01121 Dephospho-CoA kinase AB895_1822 PF06750 Bacterial Peptidase A24 N-terminal domain AB895_1822 PF01478 Type IV leader peptidase family AB895_1823 PF00482 Type II secretion system (T2SS), protein F AB895_1824 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AB895_1824 PF00437 Type II/IV secretion system protein AB895_1825 PF00121 Triosephosphate isomerase AB895_1826 PF03840 Preprotein translocase SecG subunit AB895_1830 PF17384 RimP C-terminal SH3 domain AB895_1830 PF02576 RimP N-terminal domain AB895_1831 PF13184 NusA-like KH domain AB895_1831 PF08529 NusA N-terminal domain AB895_1831 PF00575 S1 RNA binding domain AB895_1832 PF04760 Translation initiation factor IF-2, N-terminal region AB895_1832 PF11987 Translation-initiation factor 2 AB895_1832 PF00009 Elongation factor Tu GTP binding domain AB895_1832 PF08364 Bacterial translation initiation factor IF-2 associated region AB895_1833 PF02033 Ribosome-binding factor A AB895_1835 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AB895_1837 PF00361 Proton-conducting membrane transporter AB895_1838 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB895_1839 PF13244 Domain of unknown function (DUF4040) AB895_1839 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB895_1839 PF00361 Proton-conducting membrane transporter AB895_1839 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AB895_1842 PF01502 Phosphoribosyl-AMP cyclohydrolase AB895_1844 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB895_1845 PF01494 FAD binding domain AB895_1846 PF03109 ABC1 family AB895_1848 PF01209 ubiE/COQ5 methyltransferase family AB895_1850 PF03976 Polyphosphate kinase 2 (PPK2) AB895_1852 PF17946 RecC C-terminal domain AB895_1853 PF12705 PD-(D/E)XK nuclease superfamily AB895_1853 PF00580 UvrD/REP helicase N-terminal domain AB895_1853 PF13361 UvrD-like helicase C-terminal domain AB895_1854 PF13538 UvrD-like helicase C-terminal domain AB895_1856 PF00312 Ribosomal protein S15 AB895_1857 PF01138 3' exoribonuclease family, domain 1 AB895_1857 PF00575 S1 RNA binding domain AB895_1857 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AB895_1857 PF03725 3' exoribonuclease family, domain 2 AB895_1857 PF00013 KH domain AB895_1858 PF01544 CorA-like Mg2+ transporter protein AB895_1860 PF00226 DnaJ domain AB895_1860 PF01556 DnaJ C terminal domain AB895_1862 PF01430 Hsp33 protein AB895_1863 PF02254 TrkA-N domain AB895_1863 PF00999 Sodium/hydrogen exchanger family AB895_1864 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AB895_1864 PF18074 Primosomal protein N C-terminal domain AB895_1864 PF17764 3′ DNA-binding domain (3′BD) AB895_1864 PF00271 Helicase conserved C-terminal domain AB895_1864 PF00270 DEAD/DEAH box helicase AB895_1865 PF00482 Type II secretion system (T2SS), protein F AB895_1866 PF07963 Prokaryotic N-terminal methylation motif AB895_1866 PF08334 Type II secretion system (T2SS), protein G AB895_1868 PF01588 Putative tRNA binding domain AB895_1869 PF00795 Carbon-nitrogen hydrolase AB895_1870 PF00571 CBS domain AB895_1870 PF03471 Transporter associated domain AB895_1871 PF01206 Sulfurtransferase TusA AB895_1875 PF01177 Asp/Glu/Hydantoin racemase AB895_1878 PF00762 Ferrochelatase AB895_1879 PF00753 Metallo-beta-lactamase superfamily AB895_1880 PF03884 DNA gyrase inhibitor YacG AB895_1884 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AB895_1897 PF01197 Ribosomal protein L31 AB895_1898 PF03109 ABC1 family AB895_1899 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB895_1899 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_1900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_1900 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_1900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB895_1901 PF01554 MatE AB895_1903 PF04055 Radical SAM superfamily AB895_1903 PF06969 HemN C-terminal domain AB895_1904 PF00106 short chain dehydrogenase AB895_1905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1905 PF03466 LysR substrate binding domain AB895_1908 PF13193 AMP-binding enzyme C-terminal domain AB895_1908 PF00501 AMP-binding enzyme AB895_1909 PF12111 Polyribonucleotide phosphorylase C terminal AB895_1909 PF00575 S1 RNA binding domain AB895_1909 PF10150 Ribonuclease E/G family AB895_1911 PF00849 RNA pseudouridylate synthase AB895_1911 PF01479 S4 domain AB895_1912 PF13419 Haloacid dehalogenase-like hydrolase AB895_1913 PF13280 WYL domain AB895_1913 PF08279 HTH domain AB895_1914 PF02798 Glutathione S-transferase, N-terminal domain AB895_1916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1916 PF03466 LysR substrate binding domain AB895_1917 PF12706 Beta-lactamase superfamily domain AB895_1918 PF00141 Peroxidase AB895_1921 PF00141 Peroxidase AB895_1922 PF01590 GAF domain AB895_1922 PF05524 PEP-utilising enzyme, N-terminal AB895_1922 PF00391 PEP-utilising enzyme, mobile domain AB895_1922 PF02896 PEP-utilising enzyme, TIM barrel domain AB895_1923 PF00293 NUDIX domain AB895_1925 PF03466 LysR substrate binding domain AB895_1925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_1927 PF00330 Aconitase family (aconitate hydratase) AB895_1928 PF00694 Aconitase C-terminal domain AB895_1930 PF00180 Isocitrate/isopropylmalate dehydrogenase AB895_1933 PF01176 Translation initiation factor 1A / IF-1 AB895_1935 PF01416 tRNA pseudouridine synthase AB895_1939 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB895_1939 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB895_1941 PF00375 Sodium:dicarboxylate symporter family AB895_1943 PF03279 Bacterial lipid A biosynthesis acyltransferase AB895_1944 PF01810 LysE type translocator AB895_1948 PF08240 Alcohol dehydrogenase GroES-like domain AB895_1948 PF00107 Zinc-binding dehydrogenase AB895_1949 PF01638 HxlR-like helix-turn-helix AB895_1951 PF01131 DNA topoisomerase AB895_1951 PF01751 Toprim domain AB895_1951 PF01396 Topoisomerase DNA binding C4 zinc finger AB895_1951 PF08272 Topoisomerase I zinc-ribbon-like AB895_1954 PF00580 UvrD/REP helicase N-terminal domain AB895_1954 PF13361 UvrD-like helicase C-terminal domain AB895_1955 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AB895_1959 PF02254 TrkA-N domain AB895_1959 PF00999 Sodium/hydrogen exchanger family AB895_1960 PF00471 Ribosomal protein L33 AB895_1961 PF00830 Ribosomal L28 family AB895_1962 PF00171 Aldehyde dehydrogenase family AB895_1964 PF01842 ACT domain AB895_1964 PF00551 Formyl transferase AB895_1966 PF01618 MotA/TolQ/ExbB proton channel family AB895_1968 PF01625 Peptide methionine sulfoxide reductase AB895_1970 PF00186 Dihydrofolate reductase AB895_1971 PF00303 Thymidylate synthase AB895_1974 PF01790 Prolipoprotein diacylglyceryl transferase AB895_1988 PF00902 Sec-independent protein translocase protein (TatC) AB895_1989 PF02416 mttA/Hcf106 family AB895_1990 PF02416 mttA/Hcf106 family AB895_1992 PF01725 Ham1 family AB895_1995 PF00561 alpha/beta hydrolase fold AB895_1995 PF07021 Methionine biosynthesis protein MetW AB895_1996 PF00561 alpha/beta hydrolase fold AB895_1997 PF00682 HMGL-like AB895_1997 PF08502 LeuA allosteric (dimerisation) domain AB895_1998 PF18331 PKHD-type hydroxylase C-terminal domain AB895_1998 PF13640 2OG-Fe(II) oxygenase superfamily AB895_1999 PF00593 TonB dependent receptor AB895_1999 PF07715 TonB-dependent Receptor Plug Domain AB895_2000 PF05697 Bacterial trigger factor protein (TF) AB895_2000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_2000 PF05698 Bacterial trigger factor protein (TF) C-terminus AB895_2001 PF00574 Clp protease AB895_2002 PF06689 ClpX C4-type zinc finger AB895_2002 PF07724 AAA domain (Cdc48 subfamily) AB895_2002 PF10431 C-terminal, D2-small domain, of ClpB protein AB895_2005 PF05683 Fumarase C-terminus AB895_2005 PF05681 Fumarate hydratase (Fumerase) AB895_2006 PF00872 Transposase, Mutator family AB895_2007 PF01515 Phosphate acetyl/butaryl transferase AB895_2007 PF07085 DRTGG domain AB895_2008 PF00871 Acetokinase family AB895_2009 PF00920 Dehydratase family AB895_2010 PF01081 KDPG and KHG aldolase AB895_2011 PF02447 GntP family permease AB895_2012 PF01202 Shikimate kinase AB895_2013 PF00171 Aldehyde dehydrogenase family AB895_2014 PF00171 Aldehyde dehydrogenase family AB895_2015 PF00561 alpha/beta hydrolase fold AB895_2017 PF00933 Glycosyl hydrolase family 3 N terminal domain AB895_2018 PF03572 Peptidase family S41 AB895_2018 PF11818 C-terminal domain of tail specific protease (DUF3340) AB895_2018 PF17804 Tail specific protease N-terminal domain AB895_2018 PF00595 PDZ domain AB895_2019 PF13439 Glycosyltransferase Family 4 AB895_2019 PF00534 Glycosyl transferases group 1 AB895_2020 PF01569 PAP2 superfamily AB895_2021 PF04384 Iron-sulphur cluster assembly AB895_2022 PF00334 Nucleoside diphosphate kinase AB895_2023 PF04055 Radical SAM superfamily AB895_2025 PF13464 Domain of unknown function (DUF4115) AB895_2026 PF04551 GcpE protein AB895_2027 PF03129 Anticodon binding domain AB895_2027 PF13393 Histidyl-tRNA synthetase AB895_2029 PF13360 PQQ-like domain AB895_2030 PF01926 50S ribosome-binding GTPase AB895_2030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB895_2032 PF02556 Preprotein translocase subunit SecB AB895_2033 PF00462 Glutaredoxin AB895_2035 PF03193 RsgA GTPase AB895_2036 PF00929 Exonuclease AB895_2039 PF02321 Outer membrane efflux protein AB895_2040 PF12704 MacB-like periplasmic core domain AB895_2040 PF00005 ABC transporter AB895_2040 PF02687 FtsX-like permease family AB895_2041 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_2044 PF00133 tRNA synthetases class I (I, L, M and V) AB895_2044 PF13603 Leucyl-tRNA synthetase, Domain 2 AB895_2044 PF08264 Anticodon-binding domain of tRNA AB895_2044 PF09334 tRNA synthetases class I (M) AB895_2046 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB895_2046 PF00205 Thiamine pyrophosphate enzyme, central domain AB895_2046 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB895_2047 PF10369 Small subunit of acetolactate synthase AB895_2048 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AB895_2048 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AB895_2049 PF00990 Diguanylate cyclase, GGDEF domain AB895_2049 PF00563 EAL domain AB895_2049 PF03707 Bacterial signalling protein N terminal repeat AB895_2050 PF13737 Transposase DDE domain AB895_2051 PF13333 Integrase core domain AB895_2051 PF13276 HTH-like domain AB895_2051 PF00665 Integrase core domain AB895_2052 PF01527 Transposase AB895_2059 PF01389 OmpA-like transmembrane domain AB895_2059 PF00691 OmpA family AB895_2061 PF00009 Elongation factor Tu GTP binding domain AB895_2061 PF03144 Elongation factor Tu domain 2 AB895_2061 PF16658 Class II release factor RF3, C-terminal domain AB895_2064 PF01026 TatD related DNase AB895_2065 PF00330 Aconitase family (aconitate hydratase) AB895_2065 PF00694 Aconitase C-terminal domain AB895_2067 PF00899 ThiF family AB895_2069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2069 PF03466 LysR substrate binding domain AB895_2071 PF01207 Dihydrouridine synthase (Dus) AB895_2072 PF00589 Phage integrase family AB895_2083 PF04945 YHS domain AB895_2084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_2084 PF00672 HAMP domain AB895_2084 PF00512 His Kinase A (phospho-acceptor) domain AB895_2085 PF00486 Transcriptional regulatory protein, C terminal AB895_2085 PF00072 Response regulator receiver domain AB895_2087 PF00394 Multicopper oxidase AB895_2087 PF07731 Multicopper oxidase AB895_2087 PF07732 Multicopper oxidase AB895_2090 PF00873 AcrB/AcrD/AcrF family AB895_2092 PF07664 Ferrous iron transport protein B C terminus AB895_2092 PF02421 Ferrous iron transport protein B AB895_2092 PF07670 Nucleoside recognition AB895_2097 PF00665 Integrase core domain AB895_2097 PF13333 Integrase core domain AB895_2097 PF13276 HTH-like domain AB895_2098 PF01527 Transposase AB895_2099 PF07690 Major Facilitator Superfamily AB895_2101 PF00892 EamA-like transporter family AB895_2102 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AB895_2102 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB895_2103 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AB895_2104 PF02233 NAD(P) transhydrogenase beta subunit AB895_2107 PF00106 short chain dehydrogenase AB895_2109 PF01261 Xylose isomerase-like TIM barrel AB895_2110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB895_2110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB895_2111 PF00378 Enoyl-CoA hydratase/isomerase AB895_2112 PF00672 HAMP domain AB895_2112 PF00072 Response regulator receiver domain AB895_2112 PF00512 His Kinase A (phospho-acceptor) domain AB895_2112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_2112 PF01627 Hpt domain AB895_2112 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AB895_2113 PF00291 Pyridoxal-phosphate dependent enzyme AB895_2115 PF05958 tRNA (Uracil-5-)-methyltransferase AB895_2116 PF04607 Region found in RelA / SpoT proteins AB895_2116 PF02824 TGS domain AB895_2116 PF13291 ACT domain AB895_2118 PF03819 MazG nucleotide pyrophosphohydrolase domain AB895_2120 PF01743 Poly A polymerase head domain AB895_2120 PF12627 Probable RNA and SrmB- binding site of polymerase A AB895_2120 PF12626 Polymerase A arginine-rich C-terminus AB895_2121 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AB895_2122 PF02548 Ketopantoate hydroxymethyltransferase AB895_2123 PF02569 Pantoate-beta-alanine ligase AB895_2124 PF03668 P-loop ATPase protein family AB895_2125 PF00381 PTS HPr component phosphorylation site AB895_2126 PF04751 Protein of unknown function (DUF615) AB895_2127 PF13193 AMP-binding enzyme C-terminal domain AB895_2127 PF00501 AMP-binding enzyme AB895_2128 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB895_2128 PF02824 TGS domain AB895_2128 PF03129 Anticodon binding domain AB895_2128 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB895_2129 PF05198 Translation initiation factor IF-3, N-terminal domain AB895_2129 PF00707 Translation initiation factor IF-3, C-terminal domain AB895_2130 PF02798 Glutathione S-transferase, N-terminal domain AB895_2130 PF00043 Glutathione S-transferase, C-terminal domain AB895_2131 PF09335 SNARE associated Golgi protein AB895_2132 PF07690 Major Facilitator Superfamily AB895_2133 PF01632 Ribosomal protein L35 AB895_2134 PF00453 Ribosomal protein L20 AB895_2138 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AB895_2138 PF01409 tRNA synthetases class II core domain (F) AB895_2139 PF03484 tRNA synthetase B5 domain AB895_2139 PF01588 Putative tRNA binding domain AB895_2139 PF03483 B3/4 domain AB895_2139 PF03147 Ferredoxin-fold anticodon binding domain AB895_2139 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AB895_2140 PF00216 Bacterial DNA-binding protein AB895_2143 PF07497 Rho termination factor, RNA-binding domain AB895_2143 PF07498 Rho termination factor, N-terminal domain AB895_2143 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB895_2144 PF00085 Thioredoxin AB895_2145 PF02541 Ppx/GppA phosphatase family AB895_2146 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AB895_2147 PF01171 PP-loop family AB895_2147 PF11734 TilS substrate C-terminal domain AB895_2147 PF09179 TilS substrate binding domain AB895_2148 PF03807 NADP oxidoreductase coenzyme F420-dependent AB895_2148 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB895_2149 PF02325 YGGT family AB895_2150 PF01612 3'-5' exonuclease AB895_2150 PF01367 5'-3' exonuclease, C-terminal SAM fold AB895_2150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB895_2150 PF00476 DNA polymerase family A AB895_2154 PF00437 Type II/IV secretion system protein AB895_2155 PF02566 OsmC-like protein AB895_2156 PF01047 MarR family AB895_2158 PF00795 Carbon-nitrogen hydrolase AB895_2169 PF00309 Sigma-54 factor, Activator interacting domain (AID) AB895_2169 PF04552 Sigma-54, DNA binding domain AB895_2169 PF04963 Sigma-54 factor, core binding domain AB895_2170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB895_2171 PF01722 BolA-like protein AB895_2172 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB895_2173 PF01634 ATP phosphoribosyltransferase AB895_2174 PF00815 Histidinol dehydrogenase AB895_2175 PF00155 Aminotransferase class I and II AB895_2176 PF00425 chorismate binding enzyme AB895_2176 PF04715 Anthranilate synthase component I, N terminal region AB895_2179 PF00293 NUDIX domain AB895_2180 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_2181 PF00814 Glycoprotease family AB895_2182 PF04445 Putative SAM-dependent methyltransferase AB895_2184 PF00756 Putative esterase AB895_2186 PF00834 Ribulose-phosphate 3 epimerase family AB895_2189 PF07732 Multicopper oxidase AB895_2189 PF07731 Multicopper oxidase AB895_2189 PF00394 Multicopper oxidase AB895_2192 PF00893 Small Multidrug Resistance protein AB895_2193 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB895_2193 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB895_2194 PF01960 ArgJ family AB895_2195 PF02445 Quinolinate synthetase A protein AB895_2200 PF00962 Adenosine/AMP deaminase AB895_2201 PF08240 Alcohol dehydrogenase GroES-like domain AB895_2201 PF00107 Zinc-binding dehydrogenase AB895_2202 PF03466 LysR substrate binding domain AB895_2202 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2203 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_2203 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_2203 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_2204 PF07690 Major Facilitator Superfamily AB895_2205 PF02515 CoA-transferase family III AB895_2207 PF00890 FAD binding domain AB895_2207 PF14537 Cytochrome c3 AB895_2208 PF03466 LysR substrate binding domain AB895_2208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2210 PF07690 Major Facilitator Superfamily AB895_2211 PF03466 LysR substrate binding domain AB895_2211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2213 PF07687 Peptidase dimerisation domain AB895_2213 PF01546 Peptidase family M20/M25/M40 AB895_2214 PF12833 Helix-turn-helix domain AB895_2214 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB895_2216 PF01810 LysE type translocator AB895_2218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2218 PF03466 LysR substrate binding domain AB895_2220 PF08267 Cobalamin-independent synthase, N-terminal domain AB895_2220 PF01717 Cobalamin-independent synthase, Catalytic domain AB895_2221 PF01613 Flavin reductase like domain AB895_2226 PF00268 Ribonucleotide reductase, small chain AB895_2228 PF00317 Ribonucleotide reductase, all-alpha domain AB895_2228 PF02867 Ribonucleotide reductase, barrel domain AB895_2228 PF03477 ATP cone domain AB895_2229 PF00072 Response regulator receiver domain AB895_2229 PF00486 Transcriptional regulatory protein, C terminal AB895_2230 PF00672 HAMP domain AB895_2230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_2230 PF00512 His Kinase A (phospho-acceptor) domain AB895_2232 PF00990 Diguanylate cyclase, GGDEF domain AB895_2232 PF17151 Periplasmic sensor domain AB895_2233 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AB895_2234 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AB895_2235 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AB895_2235 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AB895_2237 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB895_2237 PF10531 SLBB domain AB895_2237 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AB895_2238 PF00384 Molybdopterin oxidoreductase AB895_2238 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB895_2238 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB895_2239 PF00146 NADH dehydrogenase AB895_2240 PF12838 4Fe-4S dicluster domain AB895_2241 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AB895_2242 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB895_2243 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB895_2243 PF00361 Proton-conducting membrane transporter AB895_2244 PF00361 Proton-conducting membrane transporter AB895_2245 PF00361 Proton-conducting membrane transporter AB895_2247 PF00313 'Cold-shock' DNA-binding domain AB895_2248 PF03466 LysR substrate binding domain AB895_2248 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2249 PF00970 Oxidoreductase FAD-binding domain AB895_2249 PF00175 Oxidoreductase NAD-binding domain AB895_2252 PF05552 Conserved TM helix AB895_2255 PF00291 Pyridoxal-phosphate dependent enzyme AB895_2256 PF13533 Biotin-lipoyl like AB895_2261 PF09334 tRNA synthetases class I (M) AB895_2261 PF01588 Putative tRNA binding domain AB895_2263 PF10609 NUBPL iron-transfer P-loop NTPase AB895_2264 PF01048 Phosphorylase superfamily AB895_2267 PF00692 dUTPase AB895_2274 PF01207 Dihydrouridine synthase (Dus) AB895_2276 PF02881 SRP54-type protein, helical bundle domain AB895_2276 PF00448 SRP54-type protein, GTPase domain AB895_2276 PF02978 Signal peptide binding domain AB895_2277 PF03309 Type III pantothenate kinase AB895_2279 PF01925 Sulfite exporter TauE/SafE AB895_2281 PF02463 RecF/RecN/SMC N terminal domain AB895_2281 PF06470 SMC proteins Flexible Hinge Domain AB895_2283 PF01653 NAD-dependent DNA ligase adenylation domain AB895_2283 PF03120 NAD-dependent DNA ligase OB-fold domain AB895_2283 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AB895_2283 PF12826 Helix-hairpin-helix motif AB895_2283 PF00533 BRCA1 C Terminus (BRCT) domain AB895_2284 PF00210 Ferritin-like domain AB895_2285 PF07690 Major Facilitator Superfamily AB895_2286 PF00982 Glycosyltransferase family 20 AB895_2287 PF02358 Trehalose-phosphatase AB895_2288 PF08241 Methyltransferase domain AB895_2288 PF12697 Alpha/beta hydrolase family AB895_2289 PF00202 Aminotransferase class-III AB895_2289 PF06968 Biotin and Thiamin Synthesis associated domain AB895_2289 PF04055 Radical SAM superfamily AB895_2290 PF00155 Aminotransferase class I and II AB895_2293 PF01479 S4 domain AB895_2293 PF00849 RNA pseudouridylate synthase AB895_2294 PF04079 Segregation and condensation complex subunit ScpB AB895_2295 PF02616 Segregation and condensation protein ScpA AB895_2296 PF01300 Telomere recombination AB895_2297 PF04315 Elongation factor P hydroxylase AB895_2298 PF02620 Large ribosomal RNA subunit accumulation protein YceD AB895_2299 PF01783 Ribosomal L32p protein family AB895_2300 PF00698 Acyl transferase domain AB895_2302 PF00550 Phosphopantetheine attachment site AB895_2303 PF04972 BON domain AB895_2303 PF01476 LysM domain AB895_2304 PF08543 Phosphomethylpyrimidine kinase AB895_2304 PF02581 Thiamine monophosphate synthase AB895_2304 PF03070 TENA/THI-4/PQQC family AB895_2306 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB895_2309 PF02261 Aspartate decarboxylase AB895_2310 PF01195 Peptidyl-tRNA hydrolase AB895_2311 PF01386 Ribosomal L25p family AB895_2312 PF14572 Phosphoribosyl synthetase-associated domain AB895_2312 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB895_2318 PF00288 GHMP kinases N terminal domain AB895_2318 PF08544 GHMP kinases C terminal AB895_2319 PF03550 Outer membrane lipoprotein LolB AB895_2321 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AB895_2321 PF01488 Shikimate / quinate 5-dehydrogenase AB895_2321 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AB895_2322 PF01807 CHC2 zinc finger AB895_2322 PF08278 DNA primase DnaG DnaB-binding AB895_2322 PF08275 DNA primase catalytic core, N-terminal domain AB895_2322 PF10410 DnaB-helicase binding domain of primase AB895_2323 PF13525 Outer membrane lipoprotein AB895_2324 PF01479 S4 domain AB895_2324 PF00849 RNA pseudouridylate synthase AB895_2326 PF03358 NADPH-dependent FMN reductase AB895_2327 PF01668 SmpB protein AB895_2328 PF01467 Cytidylyltransferase-like AB895_2329 PF00037 4Fe-4S binding domain AB895_2332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2332 PF03466 LysR substrate binding domain AB895_2333 PF00180 Isocitrate/isopropylmalate dehydrogenase AB895_2334 PF02028 BCCT, betaine/carnitine/choline family transporter AB895_2335 PF07859 alpha/beta hydrolase fold AB895_2336 PF00355 Rieske [2Fe-2S] domain AB895_2336 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB895_2337 PF00171 Aldehyde dehydrogenase family AB895_2338 PF00175 Oxidoreductase NAD-binding domain AB895_2338 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_2338 PF00970 Oxidoreductase FAD-binding domain AB895_2341 PF02540 NAD synthase AB895_2341 PF00795 Carbon-nitrogen hydrolase AB895_2343 PF00872 Transposase, Mutator family AB895_2344 PF02678 Pirin AB895_2344 PF05726 Pirin C-terminal cupin domain AB895_2346 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_2346 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_2348 PF00164 Ribosomal protein S12/S23 AB895_2349 PF00177 Ribosomal protein S7p/S5e AB895_2350 PF03764 Elongation factor G, domain IV AB895_2350 PF14492 Elongation Factor G, domain II AB895_2350 PF00009 Elongation factor Tu GTP binding domain AB895_2350 PF03144 Elongation factor Tu domain 2 AB895_2350 PF00679 Elongation factor G C-terminus AB895_2351 PF00009 Elongation factor Tu GTP binding domain AB895_2351 PF03144 Elongation factor Tu domain 2 AB895_2351 PF03143 Elongation factor Tu C-terminal domain AB895_2354 PF00583 Acetyltransferase (GNAT) family AB895_2355 PF04376 Arginine-tRNA-protein transferase, N terminus AB895_2355 PF04377 Arginine-tRNA-protein transferase, C terminus AB895_2356 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AB895_2357 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2358 PF01580 FtsK/SpoIIIE family AB895_2358 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AB895_2358 PF17854 FtsK alpha domain AB895_2358 PF09397 Ftsk gamma domain AB895_2359 PF01810 LysE type translocator AB895_2361 PF03776 Septum formation topological specificity factor MinE AB895_2362 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AB895_2363 PF03775 Septum formation inhibitor MinC, C-terminal domain AB895_2365 PF01553 Acyltransferase AB895_2366 PF13488 Glycine zipper AB895_2366 PF00691 OmpA family AB895_2367 PF00580 UvrD/REP helicase N-terminal domain AB895_2367 PF13361 UvrD-like helicase C-terminal domain AB895_2368 PF00692 dUTPase AB895_2369 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB895_2369 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB895_2369 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB895_2369 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB895_2370 PF00696 Amino acid kinase family AB895_2372 PF13230 Glutamine amidotransferases class-II AB895_2373 PF01814 Hemerythrin HHE cation binding domain AB895_2375 PF03658 RnfH family Ubiquitin AB895_2376 PF04355 SmpA / OmlA family AB895_2377 PF01475 Ferric uptake regulator family AB895_2378 PF00437 Type II/IV secretion system protein AB895_2379 PF00437 Type II/IV secretion system protein AB895_2380 PF01168 Alanine racemase, N-terminal domain AB895_2382 PF12320 Type 5 capsule protein repressor C-terminal domain AB895_2382 PF00149 Calcineurin-like phosphoesterase AB895_2388 PF08338 Domain of unknown function (DUF1731) AB895_2388 PF01370 NAD dependent epimerase/dehydratase family AB895_2389 PF01266 FAD dependent oxidoreductase AB895_2390 PF00490 Delta-aminolevulinic acid dehydratase AB895_2391 PF03061 Thioesterase superfamily AB895_2392 PF13533 Biotin-lipoyl like AB895_2393 PF07690 Major Facilitator Superfamily AB895_2417 PF13737 Transposase DDE domain AB895_2419 PF11799 impB/mucB/samB family C-terminal domain AB895_2419 PF11798 IMS family HHH motif AB895_2419 PF13438 Domain of unknown function (DUF4113) AB895_2419 PF00817 impB/mucB/samB family AB895_2420 PF00717 Peptidase S24-like AB895_2423 PF00589 Phage integrase family AB895_2423 PF13356 Arm DNA-binding domain AB895_2434 PF13276 HTH-like domain AB895_2434 PF13333 Integrase core domain AB895_2434 PF00665 Integrase core domain AB895_2436 PF00083 Sugar (and other) transporter AB895_2437 PF00701 Dihydrodipicolinate synthetase family AB895_2439 PF08281 Sigma-70, region 4 AB895_2439 PF04542 Sigma-70 region 2 AB895_2441 PF07715 TonB-dependent Receptor Plug Domain AB895_2441 PF00593 TonB dependent receptor AB895_2445 PF01126 Heme oxygenase AB895_2451 PF13520 Amino acid permease AB895_2452 PF02574 Homocysteine S-methyltransferase AB895_2454 PF06039 Malate:quinone oxidoreductase (Mqo) AB895_2455 PF05199 GMC oxidoreductase AB895_2455 PF00732 GMC oxidoreductase AB895_2456 PF00171 Aldehyde dehydrogenase family AB895_2457 PF00440 Bacterial regulatory proteins, tetR family AB895_2457 PF13977 BetI-type transcriptional repressor, C-terminal AB895_2458 PF02028 BCCT, betaine/carnitine/choline family transporter AB895_2459 PF02028 BCCT, betaine/carnitine/choline family transporter AB895_2461 PF03061 Thioesterase superfamily AB895_2463 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB895_2463 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB895_2464 PF00375 Sodium:dicarboxylate symporter family AB895_2465 PF13737 Transposase DDE domain AB895_2466 PF00375 Sodium:dicarboxylate symporter family AB895_2467 PF07152 YaeQ protein AB895_2468 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB895_2469 PF01522 Polysaccharide deacetylase AB895_2469 PF14883 Hypothetical glycosyl hydrolase family 13 AB895_2470 PF00535 Glycosyl transferase family 2 AB895_2472 PF00378 Enoyl-CoA hydratase/isomerase AB895_2475 PF01614 Bacterial transcriptional regulator AB895_2475 PF09339 IclR helix-turn-helix domain AB895_2476 PF00355 Rieske [2Fe-2S] domain AB895_2478 PF00355 Rieske [2Fe-2S] domain AB895_2480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB895_2481 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2481 PF14759 Reductase C-terminal AB895_2482 PF07690 Major Facilitator Superfamily AB895_2484 PF12697 Alpha/beta hydrolase family AB895_2486 PF03447 Homoserine dehydrogenase, NAD binding domain AB895_2486 PF01958 Domain of unknown function DUF108 AB895_2487 PF00171 Aldehyde dehydrogenase family AB895_2488 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB895_2488 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB895_2488 PF00205 Thiamine pyrophosphate enzyme, central domain AB895_2490 PF07690 Major Facilitator Superfamily AB895_2491 PF01327 Polypeptide deformylase AB895_2492 PF04960 Glutaminase AB895_2493 PF12833 Helix-turn-helix domain AB895_2493 PF02311 AraC-like ligand binding domain AB895_2494 PF07690 Major Facilitator Superfamily AB895_2495 PF01263 Aldose 1-epimerase AB895_2497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2497 PF03466 LysR substrate binding domain AB895_2499 PF07690 Major Facilitator Superfamily AB895_2500 PF00456 Transketolase, thiamine diphosphate binding domain AB895_2501 PF02780 Transketolase, C-terminal domain AB895_2501 PF02779 Transketolase, pyrimidine binding domain AB895_2502 PF02310 B12 binding domain AB895_2502 PF02607 B12 binding domain AB895_2502 PF02965 Vitamin B12 dependent methionine synthase, activation domain AB895_2502 PF02574 Homocysteine S-methyltransferase AB895_2502 PF00809 Pterin binding enzyme AB895_2504 PF01384 Phosphate transporter family AB895_2505 PF00291 Pyridoxal-phosphate dependent enzyme AB895_2508 PF03781 Sulfatase-modifying factor enzyme 1 AB895_2509 PF00884 Sulfatase AB895_2512 PF01521 Iron-sulphur cluster biosynthesis AB895_2512 PF01106 NifU-like domain AB895_2513 PF07715 TonB-dependent Receptor Plug Domain AB895_2513 PF00593 TonB dependent receptor AB895_2515 PF00561 alpha/beta hydrolase fold AB895_2516 PF00484 Carbonic anhydrase AB895_2517 PF13472 GDSL-like Lipase/Acylhydrolase family AB895_2518 PF00005 ABC transporter AB895_2520 PF01694 Rhomboid family AB895_2521 PF00912 Transglycosylase AB895_2522 PF02503 Polyphosphate kinase middle domain AB895_2522 PF13089 Polyphosphate kinase N-terminal domain AB895_2522 PF17941 Polyphosphate kinase C-terminal domain 1 AB895_2522 PF13090 Polyphosphate kinase C-terminal domain 2 AB895_2524 PF03466 LysR substrate binding domain AB895_2524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2525 PF00561 alpha/beta hydrolase fold AB895_2526 PF18113 Rubredoxin binding C-terminal domain AB895_2526 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2527 PF00301 Rubredoxin AB895_2530 PF00152 tRNA synthetases class II (D, K and N) AB895_2530 PF01336 OB-fold nucleic acid binding domain AB895_2531 PF14052 Capsule assembly protein Wzi AB895_2533 PF01507 Phosphoadenosine phosphosulfate reductase family AB895_2534 PF00009 Elongation factor Tu GTP binding domain AB895_2537 PF03600 Citrate transporter AB895_2538 PF01595 Cyclin M transmembrane N-terminal domain AB895_2538 PF00571 CBS domain AB895_2538 PF03471 Transporter associated domain AB895_2539 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2539 PF03466 LysR substrate binding domain AB895_2540 PF00463 Isocitrate lyase family AB895_2544 PF01774 UreD urease accessory protein AB895_2545 PF00547 Urease, gamma subunit AB895_2546 PF00699 Urease beta subunit AB895_2548 PF01979 Amidohydrolase family AB895_2548 PF00449 Urease alpha-subunit, N-terminal domain AB895_2549 PF05194 UreE urease accessory protein, C-terminal domain AB895_2549 PF02814 UreE urease accessory protein, N-terminal domain AB895_2550 PF01730 UreF AB895_2551 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB895_2554 PF03717 Penicillin-binding Protein dimerisation domain AB895_2554 PF00905 Penicillin binding protein transpeptidase domain AB895_2557 PF05191 Adenylate kinase, active site lid AB895_2559 PF00730 HhH-GPD superfamily base excision DNA repair protein AB895_2559 PF10576 Iron-sulfur binding domain of endonuclease III AB895_2559 PF00633 Helix-hairpin-helix motif AB895_2560 PF04060 Putative Fe-S cluster AB895_2561 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB895_2561 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB895_2563 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AB895_2564 PF02590 Predicted SPOUT methyltransferase AB895_2565 PF05362 Lon protease (S16) C-terminal proteolytic domain AB895_2565 PF02190 ATP-dependent protease La (LON) substrate-binding domain AB895_2565 PF00004 ATPase family associated with various cellular activities (AAA) AB895_2566 PF13018 Extended Signal Peptide of Type V secretion system AB895_2566 PF03895 YadA-like membrane anchor domain AB895_2566 PF05662 Coiled stalk of trimeric autotransporter adhesin AB895_2566 PF05658 Head domain of trimeric autotransporter adhesin AB895_2568 PF01812 5-formyltetrahydrofolate cyclo-ligase family AB895_2575 PF00557 Metallopeptidase family M24 AB895_2575 PF05195 Aminopeptidase P, N-terminal domain AB895_2576 PF01494 FAD binding domain AB895_2577 PF01494 FAD binding domain AB895_2580 PF13411 MerR HTH family regulatory protein AB895_2582 PF01810 LysE type translocator AB895_2583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2583 PF03466 LysR substrate binding domain AB895_2585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB895_2587 PF02021 Uncharacterised protein family UPF0102 AB895_2588 PF04972 BON domain AB895_2590 PF00293 NUDIX domain AB895_2590 PF09297 NADH pyrophosphatase zinc ribbon domain AB895_2592 PF00929 Exonuclease AB895_2593 PF01476 LysM domain AB895_2593 PF01464 Transglycosylase SLT domain AB895_2594 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB895_2595 PF00528 Binding-protein-dependent transport system inner membrane component AB895_2596 PF00528 Binding-protein-dependent transport system inner membrane component AB895_2596 PF12911 N-terminal TM domain of oligopeptide transport permease C AB895_2597 PF00005 ABC transporter AB895_2597 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB895_2598 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_2598 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2599 PF07715 TonB-dependent Receptor Plug Domain AB895_2599 PF00593 TonB dependent receptor AB895_2601 PF00929 Exonuclease AB895_2602 PF01979 Amidohydrolase family AB895_2603 PF00360 Phytochrome region AB895_2603 PF01590 GAF domain AB895_2603 PF00563 EAL domain AB895_2603 PF00990 Diguanylate cyclase, GGDEF domain AB895_2604 PF00764 Arginosuccinate synthase AB895_2606 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_2606 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2608 PF00589 Phage integrase family AB895_2608 PF13356 Arm DNA-binding domain AB895_2610 PF00872 Transposase, Mutator family AB895_2611 PF00665 Integrase core domain AB895_2611 PF02796 Helix-turn-helix domain of resolvase AB895_2614 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB895_2614 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB895_2619 PF03466 LysR substrate binding domain AB895_2619 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2620 PF07687 Peptidase dimerisation domain AB895_2620 PF01546 Peptidase family M20/M25/M40 AB895_2621 PF00005 ABC transporter AB895_2623 PF00596 Class II Aldolase and Adducin N-terminal domain AB895_2624 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB895_2625 PF13737 Transposase DDE domain AB895_2646 PF00440 Bacterial regulatory proteins, tetR family AB895_2656 PF13087 AAA domain AB895_2656 PF13086 AAA domain AB895_2656 PF13195 Protein of unknown function (DUF4011) AB895_2659 PF13737 Transposase DDE domain AB895_2660 PF01011 PQQ enzyme repeat AB895_2660 PF13360 PQQ-like domain AB895_2668 PF05987 Bacterial protein of unknown function (DUF898) AB895_2669 PF03180 NLPA lipoprotein AB895_2674 PF03783 Curli production assembly/transport component CsgG AB895_2676 PF05643 Putative bacterial lipoprotein (DUF799) AB895_2678 PF00324 Amino acid permease AB895_2679 PF01266 FAD dependent oxidoreductase AB895_2680 PF00324 Amino acid permease AB895_2682 PF00392 Bacterial regulatory proteins, gntR family AB895_2682 PF07729 FCD domain AB895_2684 PF00171 Aldehyde dehydrogenase family AB895_2686 PF00202 Aminotransferase class-III AB895_2688 PF17954 Quercetinase C-terminal cupin domain AB895_2688 PF02678 Pirin AB895_2691 PF00106 short chain dehydrogenase AB895_2692 PF00743 Flavin-binding monooxygenase-like AB895_2694 PF00860 Permease family AB895_2695 PF00962 Adenosine/AMP deaminase AB895_2696 PF01292 Prokaryotic cytochrome b561 AB895_2698 PF01351 Ribonuclease HII AB895_2699 PF02599 Global regulator protein family AB895_2700 PF01842 ACT domain AB895_2700 PF13840 ACT domain AB895_2700 PF00696 Amino acid kinase family AB895_2753 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AB895_2770 PF00313 'Cold-shock' DNA-binding domain AB895_2773 PF13356 Arm DNA-binding domain AB895_2773 PF00589 Phage integrase family AB895_2774 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB895_2774 PF01411 tRNA synthetases class II (A) AB895_2774 PF02272 DHHA1 domain AB895_2775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB895_2775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB895_2776 PF13393 Histidyl-tRNA synthetase AB895_2777 PF00709 Adenylosuccinate synthetase AB895_2780 PF00248 Aldo/keto reductase family AB895_2781 PF13545 Crp-like helix-turn-helix domain AB895_2781 PF00027 Cyclic nucleotide-binding domain AB895_2782 PF02566 OsmC-like protein AB895_2785 PF02861 Clp amino terminal domain, pathogenicity island component AB895_2785 PF07724 AAA domain (Cdc48 subfamily) AB895_2785 PF17871 AAA lid domain AB895_2785 PF10431 C-terminal, D2-small domain, of ClpB protein AB895_2785 PF00004 ATPase family associated with various cellular activities (AAA) AB895_2788 PF10672 S-adenosylmethionine-dependent methyltransferase AB895_2788 PF02926 THUMP domain AB895_2788 PF01170 Putative RNA methylase family UPF0020 AB895_2790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB895_2790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB895_2791 PF01979 Amidohydrolase family AB895_2792 PF00691 OmpA family AB895_2792 PF13488 Glycine zipper AB895_2794 PF13417 Glutathione S-transferase, N-terminal domain AB895_2794 PF00043 Glutathione S-transferase, C-terminal domain AB895_2795 PF02390 Putative methyltransferase AB895_2797 PF00043 Glutathione S-transferase, C-terminal domain AB895_2797 PF02798 Glutathione S-transferase, N-terminal domain AB895_2799 PF13192 Thioredoxin domain AB895_2799 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2803 PF00578 AhpC/TSA family AB895_2803 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB895_2804 PF00270 DEAD/DEAH box helicase AB895_2804 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AB895_2804 PF00271 Helicase conserved C-terminal domain AB895_2804 PF04408 Helicase associated domain (HA2) AB895_2804 PF11898 Domain of unknown function (DUF3418) AB895_2805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AB895_2805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AB895_2807 PF07690 Major Facilitator Superfamily AB895_2808 PF03594 Benzoate membrane transport protein AB895_2809 PF00106 short chain dehydrogenase AB895_2810 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_2810 PF00175 Oxidoreductase NAD-binding domain AB895_2810 PF00970 Oxidoreductase FAD-binding domain AB895_2811 PF00866 Ring hydroxylating beta subunit AB895_2812 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB895_2812 PF00355 Rieske [2Fe-2S] domain AB895_2813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2813 PF03466 LysR substrate binding domain AB895_2815 PF00403 Heavy-metal-associated domain AB895_2816 PF09278 MerR, DNA binding AB895_2816 PF00376 MerR family regulatory protein AB895_2823 PF02601 Exonuclease VII, large subunit AB895_2823 PF13742 OB-fold nucleic acid binding domain AB895_2829 PF01810 LysE type translocator AB895_2830 PF00313 'Cold-shock' DNA-binding domain AB895_2832 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB895_2832 PF03807 NADP oxidoreductase coenzyme F420-dependent AB895_2836 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_2838 PF07690 Major Facilitator Superfamily AB895_2839 PF01638 HxlR-like helix-turn-helix AB895_2846 PF01406 tRNA synthetases class I (C) catalytic domain AB895_2846 PF09190 DALR domain AB895_2847 PF00571 CBS domain AB895_2847 PF01380 SIS domain AB895_2850 PF03968 OstA-like protein AB895_2851 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB895_2851 PF00005 ABC transporter AB895_2852 PF02321 Outer membrane efflux protein AB895_2853 PF03412 Peptidase C39 family AB895_2853 PF00664 ABC transporter transmembrane region AB895_2853 PF00005 ABC transporter AB895_2855 PF01205 Uncharacterized protein family UPF0029 AB895_2856 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_2858 PF01596 O-methyltransferase AB895_2860 PF00037 4Fe-4S binding domain AB895_2860 PF11953 Domain of unknown function (DUF3470) AB895_2862 PF05192 MutS domain III AB895_2862 PF05188 MutS domain II AB895_2862 PF01624 MutS domain I AB895_2862 PF00488 MutS domain V AB895_2862 PF05190 MutS family domain IV AB895_2864 PF01037 Lrp/AsnC ligand binding domain AB895_2865 PF00892 EamA-like transporter family AB895_2866 PF00990 Diguanylate cyclase, GGDEF domain AB895_2866 PF00563 EAL domain AB895_2866 PF03707 Bacterial signalling protein N terminal repeat AB895_2867 PF03279 Bacterial lipid A biosynthesis acyltransferase AB895_2870 PF07690 Major Facilitator Superfamily AB895_2874 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB895_2874 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB895_2878 PF13419 Haloacid dehalogenase-like hydrolase AB895_2881 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2881 PF03466 LysR substrate binding domain AB895_2882 PF01566 Natural resistance-associated macrophage protein AB895_2883 PF03746 LamB/YcsF family AB895_2884 PF07286 Protein of unknown function (DUF1445) AB895_2886 PF00364 Biotin-requiring enzyme AB895_2886 PF00289 Biotin carboxylase, N-terminal domain AB895_2886 PF02785 Biotin carboxylase C-terminal domain AB895_2886 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB895_2887 PF00654 Voltage gated chloride channel AB895_2893 PF00107 Zinc-binding dehydrogenase AB895_2893 PF08240 Alcohol dehydrogenase GroES-like domain AB895_2893 PF13823 Alcohol dehydrogenase GroES-associated AB895_2895 PF13737 Transposase DDE domain AB895_2896 PF07690 Major Facilitator Superfamily AB895_2899 PF02677 Epoxyqueuosine reductase QueH AB895_2900 PF09278 MerR, DNA binding AB895_2900 PF00376 MerR family regulatory protein AB895_2902 PF00701 Dihydrodipicolinate synthetase family AB895_2904 PF00392 Bacterial regulatory proteins, gntR family AB895_2905 PF05544 Proline racemase AB895_2906 PF01266 FAD dependent oxidoreductase AB895_2908 PF04324 BFD-like [2Fe-2S] binding domain AB895_2908 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_2910 PF00083 Sugar (and other) transporter AB895_2911 PF00171 Aldehyde dehydrogenase family AB895_2912 PF13520 Amino acid permease AB895_2913 PF03315 Serine dehydratase beta chain AB895_2913 PF03313 Serine dehydratase alpha chain AB895_2914 PF00171 Aldehyde dehydrogenase family AB895_2914 PF01575 MaoC like domain AB895_2915 PF05138 Phenylacetic acid catabolic protein AB895_2916 PF06243 Phenylacetic acid degradation B AB895_2917 PF05138 Phenylacetic acid catabolic protein AB895_2918 PF01883 Iron-sulfur cluster assembly protein AB895_2919 PF00175 Oxidoreductase NAD-binding domain AB895_2919 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_2919 PF00970 Oxidoreductase FAD-binding domain AB895_2920 PF00378 Enoyl-CoA hydratase/isomerase AB895_2921 PF00378 Enoyl-CoA hydratase/isomerase AB895_2922 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB895_2922 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB895_2922 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB895_2923 PF02803 Thiolase, C-terminal domain AB895_2923 PF00108 Thiolase, N-terminal domain AB895_2924 PF00501 AMP-binding enzyme AB895_2924 PF14535 AMP-binding enzyme C-terminal domain AB895_2925 PF08223 PaaX-like protein C-terminal domain AB895_2925 PF07848 PaaX-like protein AB895_2926 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_2927 PF03061 Thioesterase superfamily AB895_2928 PF03527 RHS protein AB895_2935 PF02515 CoA-transferase family III AB895_2936 PF00682 HMGL-like AB895_2937 PF07690 Major Facilitator Superfamily AB895_2938 PF00202 Aminotransferase class-III AB895_2939 PF12833 Helix-turn-helix domain AB895_2939 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB895_2941 PF01636 Phosphotransferase enzyme family AB895_2943 PF13520 Amino acid permease AB895_2944 PF00199 Catalase AB895_2945 PF01292 Prokaryotic cytochrome b561 AB895_2949 PF12697 Alpha/beta hydrolase family AB895_2950 PF01613 Flavin reductase like domain AB895_2951 PF00296 Luciferase-like monooxygenase AB895_2952 PF00171 Aldehyde dehydrogenase family AB895_2954 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB895_2956 PF00171 Aldehyde dehydrogenase family AB895_2957 PF02627 Carboxymuconolactone decarboxylase family AB895_2958 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2958 PF03466 LysR substrate binding domain AB895_2959 PF02525 Flavodoxin-like fold AB895_2960 PF09339 IclR helix-turn-helix domain AB895_2960 PF01614 Bacterial transcriptional regulator AB895_2961 PF01494 FAD binding domain AB895_2962 PF00392 Bacterial regulatory proteins, gntR family AB895_2962 PF07702 UTRA domain AB895_2964 PF08402 TOBE domain AB895_2964 PF00005 ABC transporter AB895_2965 PF00528 Binding-protein-dependent transport system inner membrane component AB895_2966 PF01266 FAD dependent oxidoreductase AB895_2967 PF00266 Aminotransferase class-V AB895_2968 PF13419 Haloacid dehalogenase-like hydrolase AB895_2969 PF07690 Major Facilitator Superfamily AB895_2970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_2970 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_2970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_2971 PF02515 CoA-transferase family III AB895_2972 PF09339 IclR helix-turn-helix domain AB895_2973 PF00378 Enoyl-CoA hydratase/isomerase AB895_2974 PF03060 Nitronate monooxygenase AB895_2975 PF07690 Major Facilitator Superfamily AB895_2976 PF09339 IclR helix-turn-helix domain AB895_2977 PF02803 Thiolase, C-terminal domain AB895_2977 PF00108 Thiolase, N-terminal domain AB895_2978 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB895_2978 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB895_2978 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB895_2980 PF00378 Enoyl-CoA hydratase/isomerase AB895_2981 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_2981 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_2981 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_2982 PF07690 Major Facilitator Superfamily AB895_2983 PF01144 Coenzyme A transferase AB895_2984 PF01144 Coenzyme A transferase AB895_2986 PF07690 Major Facilitator Superfamily AB895_2988 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_2988 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB895_2988 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_2988 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_2991 PF03466 LysR substrate binding domain AB895_2991 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_2992 PF00682 HMGL-like AB895_2993 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB895_2993 PF00364 Biotin-requiring enzyme AB895_2993 PF00289 Biotin carboxylase, N-terminal domain AB895_2993 PF02785 Biotin carboxylase C-terminal domain AB895_2994 PF00378 Enoyl-CoA hydratase/isomerase AB895_2995 PF01039 Carboxyl transferase domain AB895_2996 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_2996 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_2996 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_2997 PF00440 Bacterial regulatory proteins, tetR family AB895_2998 PF13193 AMP-binding enzyme C-terminal domain AB895_2998 PF00501 AMP-binding enzyme AB895_3003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3003 PF03466 LysR substrate binding domain AB895_3010 PF18146 Damage-inducible protein CinA KH domain AB895_3010 PF00994 Probable molybdopterin binding domain AB895_3010 PF02464 Competence-damaged protein AB895_3012 PF00199 Catalase AB895_3012 PF06628 Catalase-related immune-responsive AB895_3012 PF18011 C-terminal domain found in long catalases AB895_3017 PF00717 Peptidase S24-like AB895_3019 PF01037 Lrp/AsnC ligand binding domain AB895_3019 PF13404 AsnC-type helix-turn-helix domain AB895_3021 PF09308 LuxQ, periplasmic AB895_3021 PF00072 Response regulator receiver domain AB895_3021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_3021 PF00512 His Kinase A (phospho-acceptor) domain AB895_3022 PF00072 Response regulator receiver domain AB895_3024 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3025 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3026 PF00005 ABC transporter AB895_3027 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB895_3028 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB895_3030 PF03466 LysR substrate binding domain AB895_3030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3031 PF01810 LysE type translocator AB895_3032 PF00266 Aminotransferase class-V AB895_3034 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_3035 PF00581 Rhodanese-like domain AB895_3037 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3037 PF03466 LysR substrate binding domain AB895_3038 PF02798 Glutathione S-transferase, N-terminal domain AB895_3039 PF02798 Glutathione S-transferase, N-terminal domain AB895_3039 PF14834 Glutathione S-transferase, C-terminal domain AB895_3040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3040 PF03466 LysR substrate binding domain AB895_3041 PF03788 LrgA family AB895_3042 PF04172 LrgB-like family AB895_3043 PF00155 Aminotransferase class I and II AB895_3043 PF00392 Bacterial regulatory proteins, gntR family AB895_3046 PF07690 Major Facilitator Superfamily AB895_3048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3048 PF03466 LysR substrate binding domain AB895_3049 PF16957 Malonate decarboxylase, alpha subunit, transporter AB895_3050 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB895_3051 PF06857 Malonate decarboxylase delta subunit (MdcD) AB895_3052 PF01039 Carboxyl transferase domain AB895_3054 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AB895_3055 PF00698 Acyl transferase domain AB895_3058 PF03466 LysR substrate binding domain AB895_3058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3059 PF00392 Bacterial regulatory proteins, gntR family AB895_3059 PF00155 Aminotransferase class I and II AB895_3061 PF02322 Cytochrome bd terminal oxidase subunit II AB895_3062 PF01654 Cytochrome bd terminal oxidase subunit I AB895_3065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3065 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_3065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB895_3066 PF00296 Luciferase-like monooxygenase AB895_3067 PF00083 Sugar (and other) transporter AB895_3069 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB895_3070 PF00005 ABC transporter AB895_3071 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3072 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AB895_3073 PF01177 Asp/Glu/Hydantoin racemase AB895_3074 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB895_3076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3076 PF03466 LysR substrate binding domain AB895_3078 PF13382 Adenine deaminase C-terminal domain AB895_3078 PF01979 Amidohydrolase family AB895_3081 PF03960 ArsC family AB895_3082 PF01022 Bacterial regulatory protein, arsR family AB895_3083 PF01758 Sodium Bile acid symporter family AB895_3084 PF03466 LysR substrate binding domain AB895_3084 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3087 PF13192 Thioredoxin domain AB895_3087 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3090 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_3091 PF00588 SpoU rRNA Methylase family AB895_3092 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB895_3092 PF14579 Helix-hairpin-helix motif AB895_3092 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB895_3092 PF02811 PHP domain AB895_3092 PF01336 OB-fold nucleic acid binding domain AB895_3093 PF17763 Glutaminase/Asparaginase C-terminal domain AB895_3093 PF00710 Asparaginase, N-terminal AB895_3094 PF00375 Sodium:dicarboxylate symporter family AB895_3095 PF00155 Aminotransferase class I and II AB895_3096 PF01641 SelR domain AB895_3097 PF00255 Glutathione peroxidase AB895_3098 PF12833 Helix-turn-helix domain AB895_3098 PF12852 Cupin AB895_3100 PF00155 Aminotransferase class I and II AB895_3101 PF01909 Nucleotidyltransferase domain AB895_3101 PF01966 HD domain AB895_3101 PF08335 GlnD PII-uridylyltransferase AB895_3102 PF02222 ATP-grasp domain AB895_3104 PF05437 Branched-chain amino acid transport protein (AzlD) AB895_3105 PF03591 AzlC protein AB895_3110 PF01926 50S ribosome-binding GTPase AB895_3110 PF06071 Protein of unknown function (DUF933) AB895_3111 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3112 PF00005 ABC transporter AB895_3112 PF09383 NIL domain AB895_3113 PF03180 NLPA lipoprotein AB895_3114 PF03180 NLPA lipoprotein AB895_3115 PF00296 Luciferase-like monooxygenase AB895_3117 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB895_3117 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3121 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3122 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3123 PF00005 ABC transporter AB895_3125 PF01037 Lrp/AsnC ligand binding domain AB895_3132 PF06630 Enterobacterial exodeoxyribonuclease VIII AB895_3132 PF12684 PDDEXK-like domain of unknown function (DUF3799) AB895_3137 PF00717 Peptidase S24-like AB895_3137 PF01381 Helix-turn-helix AB895_3141 PF03796 DnaB-like helicase C terminal domain AB895_3141 PF00772 DnaB-like helicase N terminal domain AB895_3191 PF01709 Transcriptional regulator AB895_3193 PF00440 Bacterial regulatory proteins, tetR family AB895_3200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB895_3202 PF00892 EamA-like transporter family AB895_3205 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB895_3205 PF12833 Helix-turn-helix domain AB895_3208 PF13954 PapC N-terminal domain AB895_3208 PF13953 PapC C-terminal domain AB895_3208 PF00577 Outer membrane usher protein AB895_3209 PF02753 Pili assembly chaperone PapD, C-terminal domain AB895_3209 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB895_3210 PF16970 Type-1 fimbrial protein, A AB895_3213 PF04055 Radical SAM superfamily AB895_3213 PF06968 Biotin and Thiamin Synthesis associated domain AB895_3214 PF08331 Domain of unknown function (DUF1730) AB895_3215 PF03853 YjeF-related protein N-terminus AB895_3215 PF01256 Carbohydrate kinase AB895_3216 PF02075 Crossover junction endodeoxyribonuclease RuvC AB895_3220 PF00905 Penicillin binding protein transpeptidase domain AB895_3224 PF02773 S-adenosylmethionine synthetase, C-terminal domain AB895_3224 PF02772 S-adenosylmethionine synthetase, central domain AB895_3224 PF00438 S-adenosylmethionine synthetase, N-terminal domain AB895_3226 PF00456 Transketolase, thiamine diphosphate binding domain AB895_3226 PF02780 Transketolase, C-terminal domain AB895_3226 PF02779 Transketolase, pyrimidine binding domain AB895_3228 PF04264 YceI-like domain AB895_3230 PF09992 Phosphodiester glycosidase AB895_3232 PF05958 tRNA (Uracil-5-)-methyltransferase AB895_3233 PF04229 GrpB protein AB895_3234 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AB895_3234 PF14850 DNA-binding domain of Proline dehydrogenase AB895_3234 PF01619 Proline dehydrogenase AB895_3234 PF00171 Aldehyde dehydrogenase family AB895_3235 PF01037 Lrp/AsnC ligand binding domain AB895_3236 PF00474 Sodium:solute symporter family AB895_3237 PF02146 Sir2 family AB895_3238 PF01597 Glycine cleavage H-protein AB895_3239 PF12833 Helix-turn-helix domain AB895_3239 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB895_3241 PF00664 ABC transporter transmembrane region AB895_3241 PF00005 ABC transporter AB895_3242 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AB895_3243 PF06912 Protein of unknown function (DUF1275) AB895_3244 PF00375 Sodium:dicarboxylate symporter family AB895_3247 PF08007 Cupin superfamily protein AB895_3248 PF02545 Maf-like protein AB895_3250 PF00162 Phosphoglycerate kinase AB895_3252 PF01116 Fructose-bisphosphate aldolase class-II AB895_3253 PF09312 SurA N-terminal domain AB895_3253 PF00639 PPIC-type PPIASE domain AB895_3254 PF03968 OstA-like protein AB895_3254 PF04453 LPS transport system D AB895_3255 PF01636 Phosphotransferase enzyme family AB895_3256 PF00483 Nucleotidyl transferase AB895_3257 PF02527 rRNA small subunit methyltransferase G AB895_3258 PF13614 AAA domain AB895_3259 PF02195 ParB-like nuclease domain AB895_3259 PF17762 HTH domain found in ParB protein AB895_3260 PF01618 MotA/TolQ/ExbB proton channel family AB895_3262 PF00005 ABC transporter AB895_3262 PF00664 ABC transporter transmembrane region AB895_3263 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AB895_3264 PF02348 Cytidylyltransferase AB895_3265 PF09115 DNA polymerase III, delta subunit, C terminal AB895_3267 PF01026 TatD related DNase AB895_3270 PF07963 Prokaryotic N-terminal methylation motif AB895_3270 PF02501 Type II secretion system (T2SS), protein I AB895_3271 PF11612 Type II secretion system (T2SS), protein J AB895_3271 PF07963 Prokaryotic N-terminal methylation motif AB895_3272 PF03934 Type II secretion system (T2SS), protein K AB895_3274 PF03167 Uracil DNA glycosylase superfamily AB895_3276 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB895_3278 PF02224 Cytidylate kinase AB895_3279 PF00575 S1 RNA binding domain AB895_3280 PF00216 Bacterial DNA-binding protein AB895_3282 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB895_3284 PF00743 Flavin-binding monooxygenase-like AB895_3286 PF03969 AFG1-like ATPase AB895_3287 PF00589 Phage integrase family AB895_3287 PF02899 Phage integrase, N-terminal SAM-like domain AB895_3297 PF03796 DnaB-like helicase C terminal domain AB895_3297 PF00772 DnaB-like helicase N terminal domain AB895_3313 PF04860 Phage portal protein AB895_3325 PF01464 Transglycosylase SLT domain AB895_3325 PF01551 Peptidase family M23 AB895_3325 PF10145 Phage-related minor tail protein AB895_3338 PF01274 Malate synthase AB895_3340 PF02472 Biopolymer transport protein ExbD/TolR AB895_3341 PF02472 Biopolymer transport protein ExbD/TolR AB895_3342 PF01618 MotA/TolQ/ExbB proton channel family AB895_3344 PF00593 TonB dependent receptor AB895_3344 PF07715 TonB-dependent Receptor Plug Domain AB895_3347 PF01432 Peptidase family M3 AB895_3348 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3349 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB895_3350 PF00005 ABC transporter AB895_3353 PF00459 Inositol monophosphatase family AB895_3355 PF01649 Ribosomal protein S20 AB895_3356 PF13460 NAD(P)H-binding AB895_3357 PF03737 Aldolase/RraA AB895_3361 PF17757 UvrB interaction domain AB895_3361 PF03461 TRCF domain AB895_3361 PF00271 Helicase conserved C-terminal domain AB895_3361 PF00270 DEAD/DEAH box helicase AB895_3361 PF02559 CarD-like/TRCF domain AB895_3363 PF00211 Adenylate and Guanylate cyclase catalytic domain AB895_3364 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_3365 PF00012 Hsp70 protein AB895_3366 PF00226 DnaJ domain AB895_3366 PF07743 HSCB C-terminal oligomerisation domain AB895_3367 PF01521 Iron-sulphur cluster biosynthesis AB895_3368 PF01592 NifU-like N terminal domain AB895_3369 PF00266 Aminotransferase class-V AB895_3370 PF02082 Transcriptional regulator AB895_3373 PF00216 Bacterial DNA-binding protein AB895_3374 PF09312 SurA N-terminal domain AB895_3374 PF00639 PPIC-type PPIASE domain AB895_3375 PF12833 Helix-turn-helix domain AB895_3375 PF12852 Cupin AB895_3376 PF00487 Fatty acid desaturase AB895_3377 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_3377 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3377 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_3378 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_3378 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3378 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_3379 PF03109 ABC1 family AB895_3381 PF04073 Aminoacyl-tRNA editing domain AB895_3382 PF06276 Ferric iron reductase FhuF-like transporter AB895_3382 PF04183 IucA / IucC family AB895_3383 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB895_3384 PF07690 Major Facilitator Superfamily AB895_3385 PF06276 Ferric iron reductase FhuF-like transporter AB895_3385 PF04183 IucA / IucC family AB895_3386 PF04183 IucA / IucC family AB895_3386 PF06276 Ferric iron reductase FhuF-like transporter AB895_3388 PF03737 Aldolase/RraA AB895_3389 PF07715 TonB-dependent Receptor Plug Domain AB895_3389 PF00593 TonB dependent receptor AB895_3398 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AB895_3399 PF02277 Phosphoribosyltransferase AB895_3400 PF00300 Histidine phosphatase superfamily (branch 1) AB895_3402 PF02654 Cobalamin-5-phosphate synthase AB895_3403 PF00793 DAHP synthetase I family AB895_3404 PF01925 Sulfite exporter TauE/SafE AB895_3407 PF00593 TonB dependent receptor AB895_3407 PF07715 TonB-dependent Receptor Plug Domain AB895_3408 PF02684 Lipid-A-disaccharide synthetase AB895_3410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_3411 PF00005 ABC transporter AB895_3418 PF01230 HIT domain AB895_3423 PF13737 Transposase DDE domain AB895_3426 PF08241 Methyltransferase domain AB895_3427 PF00561 alpha/beta hydrolase fold AB895_3428 PF01053 Cys/Met metabolism PLP-dependent enzyme AB895_3431 PF02575 YbaB/EbfC DNA-binding family AB895_3432 PF02132 RecR protein AB895_3432 PF13662 Toprim domain AB895_3433 PF00570 HRDC domain AB895_3433 PF01612 3'-5' exonuclease AB895_3434 PF13737 Transposase DDE domain AB895_3435 PF00570 HRDC domain AB895_3435 PF01612 3'-5' exonuclease AB895_3439 PF05166 YcgL domain AB895_3441 PF01434 Peptidase family M41 AB895_3441 PF00004 ATPase family associated with various cellular activities (AAA) AB895_3441 PF17862 AAA+ lid domain AB895_3443 PF00291 Pyridoxal-phosphate dependent enzyme AB895_3444 PF05175 Methyltransferase small domain AB895_3445 PF01264 Chorismate synthase AB895_3446 PF08448 PAS fold AB895_3446 PF00990 Diguanylate cyclase, GGDEF domain AB895_3450 PF04055 Radical SAM superfamily AB895_3451 PF00676 Dehydrogenase E1 component AB895_3452 PF02779 Transketolase, pyrimidine binding domain AB895_3452 PF02780 Transketolase, C-terminal domain AB895_3453 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB895_3453 PF00364 Biotin-requiring enzyme AB895_3453 PF02817 e3 binding domain AB895_3454 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB895_3454 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3455 PF00106 short chain dehydrogenase AB895_3456 PF08240 Alcohol dehydrogenase GroES-like domain AB895_3456 PF00107 Zinc-binding dehydrogenase AB895_3457 PF01062 Bestrophin, RFP-TM, chloride channel AB895_3458 PF00158 Sigma-54 interaction domain AB895_3458 PF00072 Response regulator receiver domain AB895_3458 PF02954 Bacterial regulatory protein, Fis family AB895_3459 PF04273 Putative phosphatase (DUF442) AB895_3459 PF00753 Metallo-beta-lactamase superfamily AB895_3460 PF00753 Metallo-beta-lactamase superfamily AB895_3460 PF04273 Putative phosphatase (DUF442) AB895_3461 PF01925 Sulfite exporter TauE/SafE AB895_3463 PF13737 Transposase DDE domain AB895_3465 PF12833 Helix-turn-helix domain AB895_3465 PF06445 GyrI-like small molecule binding domain AB895_3466 PF01638 HxlR-like helix-turn-helix AB895_3467 PF02525 Flavodoxin-like fold AB895_3472 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB895_3473 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3474 PF00005 ABC transporter AB895_3477 PF00083 Sugar (and other) transporter AB895_3478 PF00593 TonB dependent receptor AB895_3478 PF07715 TonB-dependent Receptor Plug Domain AB895_3479 PF00206 Lyase AB895_3479 PF10415 Fumarase C C-terminus AB895_3482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3482 PF03466 LysR substrate binding domain AB895_3483 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3483 PF03466 LysR substrate binding domain AB895_3484 PF00108 Thiolase, N-terminal domain AB895_3484 PF02803 Thiolase, C-terminal domain AB895_3485 PF02667 Short chain fatty acid transporter AB895_3486 PF01144 Coenzyme A transferase AB895_3487 PF01144 Coenzyme A transferase AB895_3488 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3488 PF03466 LysR substrate binding domain AB895_3492 PF13737 Transposase DDE domain AB895_3494 PF12833 Helix-turn-helix domain AB895_3494 PF06719 AraC-type transcriptional regulator N-terminus AB895_3495 PF07690 Major Facilitator Superfamily AB895_3496 PF01738 Dienelactone hydrolase family AB895_3499 PF01613 Flavin reductase like domain AB895_3501 PF14525 AraC-binding-like domain AB895_3501 PF12833 Helix-turn-helix domain AB895_3502 PF00970 Oxidoreductase FAD-binding domain AB895_3502 PF00175 Oxidoreductase NAD-binding domain AB895_3502 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_3503 PF00866 Ring hydroxylating beta subunit AB895_3504 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB895_3504 PF00355 Rieske [2Fe-2S] domain AB895_3505 PF03459 TOBE domain AB895_3505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3507 PF00528 Binding-protein-dependent transport system inner membrane component AB895_3508 PF03459 TOBE domain AB895_3508 PF00005 ABC transporter AB895_3509 PF00106 short chain dehydrogenase AB895_3510 PF00857 Isochorismatase family AB895_3510 PF00550 Phosphopantetheine attachment site AB895_3512 PF00149 Calcineurin-like phosphoesterase AB895_3513 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_3514 PF17941 Polyphosphate kinase C-terminal domain 1 AB895_3514 PF13089 Polyphosphate kinase N-terminal domain AB895_3514 PF13090 Polyphosphate kinase C-terminal domain 2 AB895_3514 PF02503 Polyphosphate kinase middle domain AB895_3515 PF08042 PqqA family AB895_3516 PF12706 Beta-lactamase superfamily domain AB895_3517 PF03070 TENA/THI-4/PQQC family AB895_3518 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AB895_3519 PF04055 Radical SAM superfamily AB895_3519 PF13186 Iron-sulfur cluster-binding domain AB895_3520 PF01244 Membrane dipeptidase (Peptidase family M19) AB895_3524 PF13091 PLD-like domain AB895_3527 PF00199 Catalase AB895_3529 PF00107 Zinc-binding dehydrogenase AB895_3529 PF08240 Alcohol dehydrogenase GroES-like domain AB895_3531 PF00419 Fimbrial protein AB895_3532 PF00577 Outer membrane usher protein AB895_3532 PF13953 PapC C-terminal domain AB895_3532 PF13954 PapC N-terminal domain AB895_3533 PF02753 Pili assembly chaperone PapD, C-terminal domain AB895_3533 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB895_3534 PF16970 Type-1 fimbrial protein, A AB895_3558 PF13302 Acetyltransferase (GNAT) domain AB895_3560 PF00550 Phosphopantetheine attachment site AB895_3560 PF16197 Ketoacyl-synthetase C-terminal extension AB895_3560 PF08242 Methyltransferase domain AB895_3560 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_3560 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_3560 PF14765 Polyketide synthase dehydratase AB895_3560 PF00975 Thioesterase domain AB895_3562 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_3562 PF00668 Condensation domain AB895_3562 PF16197 Ketoacyl-synthetase C-terminal extension AB895_3562 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_3562 PF13193 AMP-binding enzyme C-terminal domain AB895_3562 PF00501 AMP-binding enzyme AB895_3562 PF00550 Phosphopantetheine attachment site AB895_3562 PF00202 Aminotransferase class-III AB895_3563 PF00698 Acyl transferase domain AB895_3565 PF00668 Condensation domain AB895_3565 PF00501 AMP-binding enzyme AB895_3565 PF13193 AMP-binding enzyme C-terminal domain AB895_3565 PF00550 Phosphopantetheine attachment site AB895_3566 PF16197 Ketoacyl-synthetase C-terminal extension AB895_3566 PF16197 Ketoacyl-synthetase C-terminal extension AB895_3566 PF13193 AMP-binding enzyme C-terminal domain AB895_3566 PF00202 Aminotransferase class-III AB895_3566 PF00668 Condensation domain AB895_3566 PF00202 Aminotransferase class-III AB895_3566 PF13193 AMP-binding enzyme C-terminal domain AB895_3566 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_3566 PF00501 AMP-binding enzyme AB895_3566 PF00501 AMP-binding enzyme AB895_3566 PF00550 Phosphopantetheine attachment site AB895_3566 PF00109 Beta-ketoacyl synthase, N-terminal domain AB895_3566 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_3566 PF02801 Beta-ketoacyl synthase, C-terminal domain AB895_3566 PF00550 Phosphopantetheine attachment site AB895_3566 PF00668 Condensation domain AB895_3567 PF00501 AMP-binding enzyme AB895_3567 PF00668 Condensation domain AB895_3567 PF00550 Phosphopantetheine attachment site AB895_3567 PF00975 Thioesterase domain AB895_3567 PF13193 AMP-binding enzyme C-terminal domain AB895_3570 PF01381 Helix-turn-helix AB895_3572 PF00149 Calcineurin-like phosphoesterase AB895_3573 PF00005 ABC transporter AB895_3573 PF17755 UvrA DNA-binding domain AB895_3573 PF17760 UvrA interaction domain AB895_3574 PF00873 AcrB/AcrD/AcrF family AB895_3575 PF00529 HlyD membrane-fusion protein of T1SS AB895_3575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_3576 PF00486 Transcriptional regulatory protein, C terminal AB895_3576 PF00072 Response regulator receiver domain AB895_3577 PF16527 Two-component sensor protein CpxA, periplasmic domain AB895_3577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_3577 PF00672 HAMP domain AB895_3577 PF00512 His Kinase A (phospho-acceptor) domain AB895_3579 PF12833 Helix-turn-helix domain AB895_3579 PF02311 AraC-like ligand binding domain AB895_3580 PF12146 Serine aminopeptidase, S33 AB895_3583 PF02515 CoA-transferase family III AB895_3584 PF00682 HMGL-like AB895_3585 PF03600 Citrate transporter AB895_3587 PF01614 Bacterial transcriptional regulator AB895_3587 PF09339 IclR helix-turn-helix domain AB895_3590 PF03466 LysR substrate binding domain AB895_3590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3591 PF03573 outer membrane porin, OprD family AB895_3592 PF07690 Major Facilitator Superfamily AB895_3592 PF00083 Sugar (and other) transporter AB895_3607 PF13291 ACT domain AB895_3607 PF04607 Region found in RelA / SpoT proteins AB895_3607 PF02824 TGS domain AB895_3609 PF01975 Survival protein SurE AB895_3614 PF07690 Major Facilitator Superfamily AB895_3615 PF13533 Biotin-lipoyl like AB895_3616 PF13737 Transposase DDE domain AB895_3620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB895_3621 PF14572 Phosphoribosyl synthetase-associated domain AB895_3621 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB895_3625 PF00005 ABC transporter AB895_3629 PF00107 Zinc-binding dehydrogenase AB895_3629 PF08240 Alcohol dehydrogenase GroES-like domain AB895_3632 PF12833 Helix-turn-helix domain AB895_3632 PF06719 AraC-type transcriptional regulator N-terminus AB895_3633 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB895_3633 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB895_3634 PF07690 Major Facilitator Superfamily AB895_3635 PF01370 NAD dependent epimerase/dehydratase family AB895_3636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3636 PF03466 LysR substrate binding domain AB895_3638 PF00920 Dehydratase family AB895_3639 PF00171 Aldehyde dehydrogenase family AB895_3640 PF07519 Tannase and feruloyl esterase AB895_3643 PF00529 HlyD membrane-fusion protein of T1SS AB895_3643 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB895_3646 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3646 PF03466 LysR substrate binding domain AB895_3648 PF08450 SMP-30/Gluconolactonase/LRE-like region AB895_3651 PF04909 Amidohydrolase AB895_3652 PF07690 Major Facilitator Superfamily AB895_3655 PF13018 Extended Signal Peptide of Type V secretion system AB895_3655 PF13332 Hemagglutinin repeat AB895_3655 PF04829 Pre-toxin domain with VENN motif AB895_3655 PF05860 haemagglutination activity domain AB895_3656 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AB895_3656 PF17287 POTRA domain AB895_3656 PF08479 POTRA domain, ShlB-type AB895_3659 PF00501 AMP-binding enzyme AB895_3659 PF13193 AMP-binding enzyme C-terminal domain AB895_3661 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_3661 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_3661 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB895_3661 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3662 PF01575 MaoC like domain AB895_3663 PF00106 short chain dehydrogenase AB895_3666 PF03466 LysR substrate binding domain AB895_3666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3667 PF00440 Bacterial regulatory proteins, tetR family AB895_3667 PF08359 YsiA-like protein, C-terminal region AB895_3668 PF12706 Beta-lactamase superfamily domain AB895_3670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3672 PF00376 MerR family regulatory protein AB895_3672 PF09278 MerR, DNA binding AB895_3674 PF00106 short chain dehydrogenase AB895_3675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_3676 PF00561 alpha/beta hydrolase fold AB895_3678 PF00171 Aldehyde dehydrogenase family AB895_3680 PF07690 Major Facilitator Superfamily AB895_3681 PF00920 Dehydratase family AB895_3682 PF00392 Bacterial regulatory proteins, gntR family AB895_3682 PF07729 FCD domain AB895_3684 PF03466 LysR substrate binding domain AB895_3684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB895_3685 PF13378 Enolase C-terminal domain-like AB895_3686 PF02426 Muconolactone delta-isomerase AB895_3687 PF04444 Catechol dioxygenase N terminus AB895_3687 PF00775 Dioxygenase AB895_3688 PF01144 Coenzyme A transferase AB895_3689 PF01144 Coenzyme A transferase AB895_3690 PF02803 Thiolase, C-terminal domain AB895_3690 PF00108 Thiolase, N-terminal domain AB895_3691 PF12146 Serine aminopeptidase, S33 AB895_3692 PF01804 Penicillin amidase AB895_3693 PF00171 Aldehyde dehydrogenase family AB895_3695 PF02727 Copper amine oxidase, N2 domain AB895_3695 PF02728 Copper amine oxidase, N3 domain AB895_3695 PF01179 Copper amine oxidase, enzyme domain AB895_3695 PF07833 Copper amine oxidase N-terminal domain AB895_3696 PF02311 AraC-like ligand binding domain AB895_3696 PF12833 Helix-turn-helix domain AB895_3697 PF01613 Flavin reductase like domain AB895_3698 PF00111 2Fe-2S iron-sulfur cluster binding domain AB895_3698 PF00175 Oxidoreductase NAD-binding domain AB895_3701 PF00355 Rieske [2Fe-2S] domain AB895_3701 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB895_3704 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB895_3705 PF01425 Amidase AB895_3707 PF07690 Major Facilitator Superfamily AB895_3709 PF00106 short chain dehydrogenase AB895_3712 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB895_3712 PF02770 Acyl-CoA dehydrogenase, middle domain AB895_3712 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB895_3713 PF03466 LysR substrate binding domain AB895_3713 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3714 PF01614 Bacterial transcriptional regulator AB895_3714 PF09339 IclR helix-turn-helix domain AB895_3715 PF00753 Metallo-beta-lactamase superfamily AB895_3717 PF04143 Sulphur transport AB895_3719 PF01011 PQQ enzyme repeat AB895_3719 PF13360 PQQ-like domain AB895_3720 PF04966 Carbohydrate-selective porin, OprB family AB895_3721 PF05048 Periplasmic copper-binding protein (NosD) AB895_3722 PF01487 Type I 3-dehydroquinase AB895_3723 PF00775 Dioxygenase AB895_3724 PF00775 Dioxygenase AB895_3724 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AB895_3725 PF02627 Carboxymuconolactone decarboxylase family AB895_3726 PF07690 Major Facilitator Superfamily AB895_3727 PF00561 alpha/beta hydrolase fold AB895_3728 PF10397 Adenylosuccinate lyase C-terminus AB895_3728 PF00206 Lyase AB895_3729 PF00108 Thiolase, N-terminal domain AB895_3729 PF02803 Thiolase, C-terminal domain AB895_3730 PF01144 Coenzyme A transferase AB895_3731 PF01144 Coenzyme A transferase AB895_3732 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AB895_3733 PF04977 Septum formation initiator AB895_3734 PF04239 Protein of unknown function (DUF421) AB895_3735 PF03952 Enolase, N-terminal domain AB895_3735 PF00113 Enolase, C-terminal TIM barrel domain AB895_3736 PF00793 DAHP synthetase I family AB895_3737 PF06418 CTP synthase N-terminus AB895_3737 PF00117 Glutamine amidotransferase class-I AB895_3743 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3743 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB895_3746 PF00793 DAHP synthetase I family AB895_3747 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AB895_3748 PF07724 AAA domain (Cdc48 subfamily) AB895_3748 PF17871 AAA lid domain AB895_3748 PF02861 Clp amino terminal domain, pathogenicity island component AB895_3748 PF10431 C-terminal, D2-small domain, of ClpB protein AB895_3748 PF00004 ATPase family associated with various cellular activities (AAA) AB895_3749 PF02617 ATP-dependent Clp protease adaptor protein ClpS AB895_3751 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB895_3751 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB895_3755 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AB895_3756 PF00291 Pyridoxal-phosphate dependent enzyme AB895_3756 PF00585 C-terminal regulatory domain of Threonine dehydratase AB895_3757 PF02254 TrkA-N domain AB895_3757 PF02080 TrkA-C domain AB895_3758 PF02386 Cation transport protein AB895_3759 PF02253 Phospholipase A1 AB895_3760 PF00675 Insulinase (Peptidase family M16) AB895_3760 PF08367 Peptidase M16C associated AB895_3760 PF05193 Peptidase M16 inactive domain AB895_3761 PF07715 TonB-dependent Receptor Plug Domain AB895_3761 PF00593 TonB dependent receptor AB895_3762 PF00294 pfkB family carbohydrate kinase AB895_3764 PF07290 Protein of unknown function (DUF1449) AB895_3765 PF01654 Cytochrome bd terminal oxidase subunit I AB895_3766 PF02322 Cytochrome bd terminal oxidase subunit II AB895_3769 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AB895_3771 PF00448 SRP54-type protein, GTPase domain AB895_3771 PF02881 SRP54-type protein, helical bundle domain AB895_3777 PF00571 CBS domain AB895_3777 PF00478 IMP dehydrogenase / GMP reductase domain AB895_3778 PF00202 Aminotransferase class-III AB895_3779 PF00462 Glutaredoxin AB895_3781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB895_3781 PF03466 LysR substrate binding domain AB895_3782 PF00557 Metallopeptidase family M24 AB895_3783 PF05525 Branched-chain amino acid transport protein AB895_3787 PF05524 PEP-utilising enzyme, N-terminal AB895_3787 PF00381 PTS HPr component phosphorylation site AB895_3787 PF02896 PEP-utilising enzyme, TIM barrel domain AB895_3787 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB895_3787 PF00391 PEP-utilising enzyme, mobile domain AB895_3788 PF00294 pfkB family carbohydrate kinase AB895_3789 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB895_3789 PF02378 Phosphotransferase system, EIIC AB895_3793 PF03707 Bacterial signalling protein N terminal repeat AB895_3793 PF00990 Diguanylate cyclase, GGDEF domain AB895_3793 PF00563 EAL domain AB895_3795 PF07995 Glucose / Sorbosone dehydrogenase AB895_3797 PF00916 Sulfate permease family AB895_3797 PF01740 STAS domain AB895_3798 PF00082 Subtilase family AB895_3798 PF05922 Peptidase inhibitor I9 AB895_3800 PF00324 Amino acid permease AB895_3801 PF00266 Aminotransferase class-V AB895_3802 PF01037 Lrp/AsnC ligand binding domain AB895_3807 PF13419 Haloacid dehalogenase-like hydrolase AB895_3808 PF01479 S4 domain AB895_3809 PF00154 recA bacterial DNA recombination protein AB895_3810 PF02631 RecX family AB895_3812 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_3812 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AB895_3813 PF07977 FabA-like domain AB895_3814 PF00132 Bacterial transferase hexapeptide (six repeats) AB895_3814 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AB895_3816 PF01103 Surface antigen AB895_3816 PF07244 Surface antigen variable number repeat AB895_3817 PF13180 PDZ domain AB895_3817 PF17820 PDZ domain AB895_3817 PF02163 Peptidase family M50 AB895_3818 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AB895_3818 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AB895_3818 PF13288 DXP reductoisomerase C-terminal domain AB895_3820 PF01255 Putative undecaprenyl diphosphate synthase AB895_3821 PF01765 Ribosome recycling factor AB895_3822 PF00696 Amino acid kinase family AB895_3823 PF18693 TRAM domain AB895_3823 PF04055 Radical SAM superfamily AB895_3823 PF00919 Uncharacterized protein family UPF0004 AB895_3825 PF00512 His Kinase A (phospho-acceptor) domain AB895_3825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB895_3825 PF00989 PAS fold AB895_3826 PF00072 Response regulator receiver domain AB895_3826 PF00158 Sigma-54 interaction domain AB895_3826 PF02954 Bacterial regulatory protein, Fis family AB895_3827 PF00440 Bacterial regulatory proteins, tetR family AB895_3828 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB895_3828 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB895_3830 PF02542 YgbB family AB895_3832 PF01266 FAD dependent oxidoreductase AB895_3836 PF00206 Lyase AB895_3836 PF10415 Fumarase C C-terminus AB895_3837 PF16363 GDP-mannose 4,6 dehydratase AB895_3838 PF02635 DsrE/DsrF-like family AB895_3842 PF00892 EamA-like transporter family AB895_3843 PF00392 Bacterial regulatory proteins, gntR family AB895_3843 PF00155 Aminotransferase class I and II AB895_3844 PF01638 HxlR-like helix-turn-helix AB895_3845 PF03454 MoeA C-terminal region (domain IV) AB895_3845 PF03453 MoeA N-terminal region (domain I and II) AB895_3845 PF00994 Probable molybdopterin binding domain AB895_3846 PF00994 Probable molybdopterin binding domain AB895_3846 PF01967 MoaC family AB895_3847 PF02391 MoaE protein AB895_3849 PF04055 Radical SAM superfamily AB895_3849 PF06463 Molybdenum Cofactor Synthesis C AB895_3850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB895_3850 PF00384 Molybdopterin oxidoreductase AB895_3850 PF01568 Molydopterin dinucleotide binding domain AB895_3851 PF12804 MobA-like NTP transferase domain AB895_3852 PF00384 Molybdopterin oxidoreductase AB895_3852 PF04324 BFD-like [2Fe-2S] binding domain AB895_3852 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB895_3852 PF01568 Molydopterin dinucleotide binding domain AB895_3853 PF04324 BFD-like [2Fe-2S] binding domain AB895_3853 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB895_3853 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB895_3853 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3853 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB895_3854 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB895_3854 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB895_3854 PF13806 Rieske-like [2Fe-2S] domain AB895_3854 PF04324 BFD-like [2Fe-2S] binding domain AB895_3854 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB895_3854 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB895_3855 PF00486 Transcriptional regulatory protein, C terminal AB895_3855 PF00072 Response regulator receiver domain AB895_3856 PF00005 ABC transporter AB895_3857 PF13438 Domain of unknown function (DUF4113) AB895_3857 PF11799 impB/mucB/samB family C-terminal domain AB895_3857 PF00817 impB/mucB/samB family AB895_3858 PF02463 RecF/RecN/SMC N terminal domain AB895_3858 PF06470 SMC proteins Flexible Hinge Domain AB895_3859 PF13361 UvrD-like helicase C-terminal domain AB895_3859 PF00580 UvrD/REP helicase N-terminal domain AB895_3859 PF12705 PD-(D/E)XK nuclease superfamily AB895_3864 PF11798 IMS family HHH motif AB895_3864 PF13438 Domain of unknown function (DUF4113) AB895_3864 PF00817 impB/mucB/samB family AB895_3864 PF11799 impB/mucB/samB family C-terminal domain AB895_3865 PF01220 Dehydroquinase class II AB895_3866 PF00364 Biotin-requiring enzyme AB895_3867 PF02785 Biotin carboxylase C-terminal domain AB895_3867 PF00289 Biotin carboxylase, N-terminal domain AB895_3867 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB895_3869 PF12832 MFS_1 like family AB895_3870 PF00717 Peptidase S24-like AB895_3871 PF00817 impB/mucB/samB family AB895_3871 PF13438 Domain of unknown function (DUF4113) AB895_3871 PF11799 impB/mucB/samB family C-terminal domain AB895_3872 PF13340 Putative transposase of IS4/5 family (DUF4096) AB895_3873 PF00107 Zinc-binding dehydrogenase AB895_3873 PF13823 Alcohol dehydrogenase GroES-associated AB895_3873 PF08240 Alcohol dehydrogenase GroES-like domain