AB895_0058 SM01236 AB895_0058 AB895_0066 SM00226 Low molecular weight phosphatase family AB895_0073 SM00382 ATPases associated with a variety of cellular activities AB895_0078 SM00822 AB895_0078 AB895_0084 SM00344 helix_turn_helix ASNC type AB895_0087 SM00831 Cation transporter/ATPase, N-terminus AB895_0092 SM00382 ATPases associated with a variety of cellular activities AB895_0106 SM00344 helix_turn_helix ASNC type AB895_0107 SM00830 Chorismate mutase type II AB895_0111 SM00972 Spore Coat Protein U domain AB895_0116 SM00972 Spore Coat Protein U domain AB895_0121 SM00342 helix_turn_helix, arabinose operon control protein AB895_0121 SM00871 Bacterial transcription activator, effector binding domain AB895_0123 SM00382 ATPases associated with a variety of cellular activities AB895_0126 SM00862 Transcriptional regulatory protein, C terminal AB895_0141 SM00853 MutL C terminal dimerisation domain AB895_0141 SM01340 AB895_0141 AB895_0163 SM01230 AB895_0163 AB895_0164 SM00448 cheY-homologous receiver domain AB895_0164 SM00862 Transcriptional regulatory protein, C terminal AB895_0165 SM00387 Histidine kinase-like ATPases AB895_0165 SM00388 His Kinase A (phosphoacceptor) domain AB895_0170 SM00905 Dihydroneopterin aldolase AB895_0173 SM00903 Flavin reductase like domain AB895_0176 SM00822 AB895_0176 AB895_0177 SM00342 helix_turn_helix, arabinose operon control protein AB895_0179 SM00937 AB895_0179 AB895_0202 SM01005 Alanine racemase, C-terminal domain AB895_0204 SM00460 Transglutaminase/protease-like homologues AB895_0208 SM01228 AB895_0208 AB895_0213 SM00798 AICARFT/IMPCHase bienzyme AB895_0213 SM00851 MGS-like domain AB895_0214 SM01209 AB895_0214 AB895_0214 SM01210 AB895_0214 AB895_0216 SM00382 ATPases associated with a variety of cellular activities AB895_0216 SM00930 AB895_0216 AB895_0218 SM00849 Metallo-beta-lactamase superfamily AB895_0236 SM00972 Spore Coat Protein U domain AB895_0241 SM00972 Spore Coat Protein U domain AB895_0245 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_0245 SM00895 AB895_0245 AB895_0249 SM00342 helix_turn_helix, arabinose operon control protein AB895_0252 SM01034 Sensors of blue-light using FAD AB895_0284 SM00855 Phosphoglycerate mutase family AB895_0288 SM00487 DEAD-like helicases superfamily AB895_0288 SM00490 helicase superfamily c-terminal domain AB895_0289 SM00357 Cold shock protein domain AB895_0302 SM00830 Chorismate mutase type II AB895_0313 SM00387 Histidine kinase-like ATPases AB895_0313 SM00388 His Kinase A (phosphoacceptor) domain AB895_0314 SM00448 cheY-homologous receiver domain AB895_0314 SM00862 Transcriptional regulatory protein, C terminal AB895_0321 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_0325 SM00382 ATPases associated with a variety of cellular activities AB895_0328 SM00062 Bacterial periplasmic substrate-binding proteins AB895_0337 SM00479 AB895_0337 AB895_0340 SM00382 ATPases associated with a variety of cellular activities AB895_0349 SM00342 helix_turn_helix, arabinose operon control protein AB895_0359 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_0363 SM00996 S-adenosyl-L-homocysteine hydrolase AB895_0363 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB895_0366 SM00052 Putative diguanylate phosphodiesterase AB895_0366 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB895_0366 SM00091 PAS domain AB895_0366 SM00267 diguanylate cyclase AB895_0367 SM00919 Malic enzyme, NAD binding domain AB895_0367 SM01274 AB895_0367 AB895_0369 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB895_0380 SM01230 AB895_0380 AB895_0388 SM00463 Small MutS-related domain AB895_0390 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB895_0391 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB895_0405 SM00382 ATPases associated with a variety of cellular activities AB895_0406 SM00382 ATPases associated with a variety of cellular activities AB895_0415 SM00382 ATPases associated with a variety of cellular activities AB895_0429 SM00841 Elongation factor P, C-terminal AB895_0429 SM01185 AB895_0429 AB895_0432 SM00052 Putative diguanylate phosphodiesterase AB895_0440 SM00257 Lysin motif AB895_0444 SM00936 Penicillin-binding protein 5, C-terminal domain AB895_0453 SM00382 ATPases associated with a variety of cellular activities AB895_0459 SM00344 helix_turn_helix ASNC type AB895_0471 SM00487 DEAD-like helicases superfamily AB895_0471 SM00490 helicase superfamily c-terminal domain AB895_0477 SM00880 AB895_0477 AB895_0477 SM01118 AB895_0477 AB895_0488 SM01329 AB895_0488 AB895_0508 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB895_0512 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB895_0515 SM00487 DEAD-like helicases superfamily AB895_0515 SM00490 helicase superfamily c-terminal domain AB895_0517 SM00267 diguanylate cyclase AB895_0530 SM00358 Double-stranded RNA binding motif AB895_0533 SM00838 Elongation factor G C-terminus AB895_0536 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB895_0547 SM00382 ATPases associated with a variety of cellular activities AB895_0562 SM01211 AB895_0562 AB895_0563 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB895_0564 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB895_0565 SM00382 ATPases associated with a variety of cellular activities AB895_0589 SM00849 Metallo-beta-lactamase superfamily AB895_0590 SM00382 ATPases associated with a variety of cellular activities AB895_0604 SM00434 DNA Topoisomerase IV AB895_0605 SM00893 Electron transfer flavoprotein domain AB895_0606 SM00893 Electron transfer flavoprotein domain AB895_0615 SM00382 ATPases associated with a variety of cellular activities AB895_0616 SM00978 AB895_0616 AB895_0644 SM00849 Metallo-beta-lactamase superfamily AB895_0647 SM00883 Chaperonin 10 Kd subunit AB895_0649 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB895_0664 SM00382 ATPases associated with a variety of cellular activities AB895_0666 SM01103 AB895_0666 AB895_0669 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB895_0670 SM00851 MGS-like domain AB895_0670 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB895_0676 SM00854 Bacterial capsule synthesis protein PGA_cap AB895_0683 SM00881 CoA binding domain AB895_0687 SM00861 Transketolase, pyrimidine binding domain AB895_0694 SM00450 Rhodanese Homology Domain AB895_0716 SM00014 Acid phosphatase homologues AB895_0723 SM00822 AB895_0723 AB895_0732 SM00387 Histidine kinase-like ATPases AB895_0732 SM00388 His Kinase A (phosphoacceptor) domain AB895_0733 SM00448 cheY-homologous receiver domain AB895_0733 SM00862 Transcriptional regulatory protein, C terminal AB895_0737 SM00563 Phosphate acyltransferases AB895_0740 SM00244 prohibitin homologues AB895_0747 SM00829 Enoylreductase AB895_0748 SM00342 helix_turn_helix, arabinose operon control protein AB895_0752 SM00342 helix_turn_helix, arabinose operon control protein AB895_0759 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_0766 SM00845 GatB domain AB895_0798 SM00073 Histidine Phosphotransfer domain AB895_0798 SM00260 Two component signalling adaptor domain AB895_0798 SM00387 Histidine kinase-like ATPases AB895_0798 SM00448 cheY-homologous receiver domain AB895_0798 SM01231 AB895_0798 AB895_0799 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB895_0800 SM00260 Two component signalling adaptor domain AB895_0801 SM00448 cheY-homologous receiver domain AB895_0802 SM00448 cheY-homologous receiver domain AB895_0816 SM00903 Flavin reductase like domain AB895_0822 SM00671 Sel1-like repeats. AB895_0827 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB895_0827 SM01232 AB895_0827 AB895_0832 SM00838 Elongation factor G C-terminus AB895_0845 SM00564 beta-propeller repeat AB895_0849 SM00342 helix_turn_helix, arabinose operon control protein AB895_0859 SM00957 SecA DEAD-like domain AB895_0859 SM00958 SecA preprotein cross-linking domain AB895_0861 SM00849 Metallo-beta-lactamase superfamily AB895_0868 SM00342 helix_turn_helix, arabinose operon control protein AB895_0880 SM00448 cheY-homologous receiver domain AB895_0880 SM00862 Transcriptional regulatory protein, C terminal AB895_0881 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB895_0881 SM00387 Histidine kinase-like ATPases AB895_0881 SM00388 His Kinase A (phosphoacceptor) domain AB895_0906 SM00387 Histidine kinase-like ATPases AB895_0906 SM00388 His Kinase A (phosphoacceptor) domain AB895_0912 SM00487 DEAD-like helicases superfamily AB895_0931 SM01323 AB895_0931 AB895_0937 SM00481 DNA polymerase alpha chain like domain AB895_0942 SM00450 Rhodanese Homology Domain AB895_0958 SM00267 diguanylate cyclase AB895_0961 SM00155 Phospholipase D. Active site motifs. AB895_0962 SM00563 Phosphate acyltransferases AB895_0968 SM00650 Ribosomal RNA adenine dimethylases AB895_0975 SM00878 Biotin carboxylase C-terminal domain AB895_0996 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB895_1002 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_1012 SM00342 helix_turn_helix, arabinose operon control protein AB895_1022 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1022 SM00955 AB895_1022 AB895_1035 SM00662 RNA polymerases D AB895_1036 SM00363 S4 RNA-binding domain AB895_1036 SM01390 AB895_1036 AB895_1049 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB895_1050 SM01374 AB895_1050 AB895_1054 SM00322 K homology RNA-binding domain AB895_1057 SM01382 AB895_1057 AB895_1057 SM01383 AB895_1057 AB895_1061 SM01403 AB895_1061 AB895_1071 SM00563 Phosphate acyltransferases AB895_1074 SM00487 DEAD-like helicases superfamily AB895_1074 SM00490 helicase superfamily c-terminal domain AB895_1083 SM00382 ATPases associated with a variety of cellular activities AB895_1085 SM00487 DEAD-like helicases superfamily AB895_1085 SM00490 helicase superfamily c-terminal domain AB895_1087 SM00861 Transketolase, pyrimidine binding domain AB895_1095 SM00116 Domain in cystathionine beta-synthase and other proteins. AB895_1120 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB895_1160 SM00072 Guanylate kinase homologues. AB895_1161 SM01409 AB895_1161 AB895_1162 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB895_1162 SM00954 Region found in RelA / SpoT proteins AB895_1179 SM00965 Secretin and TonB N terminus short domain AB895_1183 SM00842 Cell division protein FtsA AB895_1211 SM00671 Sel1-like repeats. AB895_1212 SM00382 ATPases associated with a variety of cellular activities AB895_1215 SM00947 Carbonic anhydrase AB895_1216 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1216 SM00732 Likely ribonuclease with RNase H fold. AB895_1217 SM00448 cheY-homologous receiver domain AB895_1217 SM00862 Transcriptional regulatory protein, C terminal AB895_1218 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB895_1218 SM00387 Histidine kinase-like ATPases AB895_1218 SM00388 His Kinase A (phosphoacceptor) domain AB895_1227 SM00474 3'-5' exonuclease AB895_1229 SM00530 Helix-turn-helix XRE-family like proteins AB895_1233 SM00357 Cold shock protein domain AB895_1237 SM00342 helix_turn_helix, arabinose operon control protein AB895_1243 SM00477 DNA/RNA non-specific endonuclease AB895_1243 SM00892 DNA/RNA non-specific endonuclease AB895_1264 SM00342 helix_turn_helix, arabinose operon control protein AB895_1281 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1283 SM00530 Helix-turn-helix XRE-family like proteins AB895_1292 SM00829 Enoylreductase AB895_1295 SM00267 diguanylate cyclase AB895_1301 SM00387 Histidine kinase-like ATPases AB895_1301 SM00388 His Kinase A (phosphoacceptor) domain AB895_1301 SM00448 cheY-homologous receiver domain AB895_1303 SM00421 helix_turn_helix, Lux Regulon AB895_1303 SM00448 cheY-homologous receiver domain AB895_1306 SM00344 helix_turn_helix ASNC type AB895_1315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB895_1317 SM00937 AB895_1317 AB895_1322 SM00116 Domain in cystathionine beta-synthase and other proteins. AB895_1322 SM01240 AB895_1322 AB895_1324 SM00849 Metallo-beta-lactamase superfamily AB895_1332 SM00864 Tubulin/FtsZ family, GTPase domain AB895_1332 SM00865 Tubulin/FtsZ family, C-terminal domain AB895_1333 SM00842 Cell division protein FtsA AB895_1348 SM00267 diguanylate cyclase AB895_1363 SM00387 Histidine kinase-like ATPases AB895_1363 SM00433 TopoisomeraseII AB895_1382 SM00448 cheY-homologous receiver domain AB895_1382 SM00862 Transcriptional regulatory protein, C terminal AB895_1383 SM00387 Histidine kinase-like ATPases AB895_1383 SM00388 His Kinase A (phosphoacceptor) domain AB895_1386 SM00450 Rhodanese Homology Domain AB895_1388 SM00248 ankyrin repeats AB895_1389 SM01060 AB895_1389 AB895_1416 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1416 SM00866 AB895_1416 AB895_1418 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB895_1424 SM00346 helix_turn_helix isocitrate lyase regulation AB895_1430 SM01130 AB895_1430 AB895_1435 SM00382 ATPases associated with a variety of cellular activities AB895_1442 SM00478 endonuclease III AB895_1442 SM00525 AB895_1442 AB895_1446 SM00829 Enoylreductase AB895_1447 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1453 SM00271 DnaJ molecular chaperone homology domain AB895_1486 SM00235 Zinc-dependent metalloprotease AB895_1487 SM00235 Zinc-dependent metalloprotease AB895_1491 SM01001 AIR carboxylase AB895_1496 SM00014 Acid phosphatase homologues AB895_1510 SM01234 AB895_1510 AB895_1513 SM00382 ATPases associated with a variety of cellular activities AB895_1513 SM00760 Bacterial dnaA protein helix-turn-helix domain AB895_1514 SM00480 DNA polymerase III beta subunit AB895_1516 SM00387 Histidine kinase-like ATPases AB895_1516 SM00433 TopoisomeraseII AB895_1519 SM00382 ATPases associated with a variety of cellular activities AB895_1533 SM00248 ankyrin repeats AB895_1538 SM00904 Riboflavin kinase AB895_1542 SM00382 ATPases associated with a variety of cellular activities AB895_1545 SM00062 Bacterial periplasmic substrate-binding proteins AB895_1546 SM00062 Bacterial periplasmic substrate-binding proteins AB895_1562 SM00644 AB895_1562 AB895_1567 SM00226 Low molecular weight phosphatase family AB895_1569 SM00984 UDP binding domain AB895_1582 SM00984 UDP binding domain AB895_1588 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1588 SM00895 AB895_1588 AB895_1593 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1593 SM00895 AB895_1593 AB895_1608 SM00344 helix_turn_helix ASNC type AB895_1610 SM01005 Alanine racemase, C-terminal domain AB895_1621 SM00487 DEAD-like helicases superfamily AB895_1621 SM00490 helicase superfamily c-terminal domain AB895_1628 SM00530 Helix-turn-helix XRE-family like proteins AB895_1647 SM00836 DALR anticodon binding domain AB895_1647 SM01016 Arginyl tRNA synthetase N terminal dom AB895_1648 SM00919 Malic enzyme, NAD binding domain AB895_1648 SM01274 AB895_1648 AB895_1652 SM00382 ATPases associated with a variety of cellular activities AB895_1662 SM00382 ATPases associated with a variety of cellular activities AB895_1666 SM00342 helix_turn_helix, arabinose operon control protein AB895_1692 SM00422 helix_turn_helix, mercury resistance AB895_1694 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_1698 SM00641 Glycosyl hydrolases family 25 AB895_1701 SM01091 Transporter associated domain AB895_1705 SM00434 DNA Topoisomerase IV AB895_1713 SM01130 AB895_1713 AB895_1714 SM01007 Class II Aldolase and Adducin N-terminal domain AB895_1715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_1716 SM00382 ATPases associated with a variety of cellular activities AB895_1718 SM00938 Nitrogen regulatory protein P-II AB895_1731 SM00245 tail specific protease AB895_1732 SM00382 ATPases associated with a variety of cellular activities AB895_1732 SM00448 cheY-homologous receiver domain AB895_1733 SM00387 Histidine kinase-like ATPases AB895_1733 SM00388 His Kinase A (phosphoacceptor) domain AB895_1734 SM00421 helix_turn_helix, Lux Regulon AB895_1734 SM00448 cheY-homologous receiver domain AB895_1740 SM00899 AB895_1740 AB895_1758 SM00448 cheY-homologous receiver domain AB895_1758 SM00850 LytTr DNA-binding domain AB895_1764 SM00528 Domain in histone-like proteins of HNS family AB895_1766 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB895_1768 SM00240 Forkhead associated domain AB895_1778 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB895_1778 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB895_1779 SM00649 Ribosomal protein L11/L12 AB895_1784 SM00663 RNA polymerase I subunit A N-terminus AB895_1792 SM00387 Histidine kinase-like ATPases AB895_1797 SM00422 helix_turn_helix, mercury resistance AB895_1805 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB895_1805 SM00465 GIY-YIG type nucleases (URI domain) AB895_1808 SM00342 helix_turn_helix, arabinose operon control protein AB895_1810 SM00346 helix_turn_helix isocitrate lyase regulation AB895_1814 SM00732 Likely ribonuclease with RNase H fold. AB895_1817 SM00028 Tetratricopeptide repeats AB895_1819 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB895_1831 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1854 SM00382 ATPases associated with a variety of cellular activities AB895_1856 SM01387 AB895_1856 AB895_1857 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1857 SM00322 K homology RNA-binding domain AB895_1860 SM00271 DnaJ molecular chaperone homology domain AB895_1864 SM00487 DEAD-like helicases superfamily AB895_1864 SM00490 helicase superfamily c-terminal domain AB895_1870 SM00116 Domain in cystathionine beta-synthase and other proteins. AB895_1870 SM01091 Transporter associated domain AB895_1879 SM00849 Metallo-beta-lactamase superfamily AB895_1903 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_1909 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1911 SM00363 S4 RNA-binding domain AB895_1922 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB895_1930 SM01329 AB895_1930 AB895_1933 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_1934 SM00342 helix_turn_helix, arabinose operon control protein AB895_1936 SM00870 AB895_1936 AB895_1939 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB895_1946 SM00382 ATPases associated with a variety of cellular activities AB895_1948 SM00829 Enoylreductase AB895_1951 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB895_1951 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB895_1951 SM00493 AB895_1951 AB895_1955 SM00360 RNA recognition motif AB895_1994 SM00671 Sel1-like repeats. AB895_1997 SM00917 LeuA allosteric (dimerisation) domain AB895_1998 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB895_2002 SM00382 ATPases associated with a variety of cellular activities AB895_2002 SM00994 ClpX C4-type zinc finger AB895_2002 SM01086 C-terminal, D2-small domain, of ClpB protein AB895_2018 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB895_2018 SM00245 tail specific protease AB895_2020 SM00014 Acid phosphatase homologues AB895_2022 SM00562 AB895_2022 AB895_2024 SM00028 Tetratricopeptide repeats AB895_2029 SM00564 beta-propeller repeat AB895_2034 SM00450 Rhodanese Homology Domain AB895_2036 SM00479 AB895_2036 AB895_2040 SM00382 ATPases associated with a variety of cellular activities AB895_2049 SM00052 Putative diguanylate phosphodiesterase AB895_2049 SM00267 diguanylate cyclase AB895_2083 SM00746 metallochaperone-like domain AB895_2084 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB895_2084 SM00387 Histidine kinase-like ATPases AB895_2084 SM00388 His Kinase A (phosphoacceptor) domain AB895_2085 SM00448 cheY-homologous receiver domain AB895_2085 SM00862 Transcriptional regulatory protein, C terminal AB895_2093 SM00899 AB895_2093 AB895_2102 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB895_2102 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB895_2112 SM00073 Histidine Phosphotransfer domain AB895_2112 SM00387 Histidine kinase-like ATPases AB895_2112 SM00388 His Kinase A (phosphoacceptor) domain AB895_2112 SM00448 cheY-homologous receiver domain AB895_2116 SM00954 Region found in RelA / SpoT proteins AB895_2119 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB895_2128 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB895_2139 SM00873 B3/4 domain AB895_2139 SM00874 tRNA synthetase B5 domain AB895_2139 SM00896 Ferredoxin-fold anticodon binding domain AB895_2140 SM00411 bacterial (prokaryotic) histone like domain AB895_2143 SM00357 Cold shock protein domain AB895_2143 SM00382 ATPases associated with a variety of cellular activities AB895_2143 SM00959 Rho termination factor, N-terminal domain AB895_2147 SM00977 TilS substrate C-terminal domain AB895_2150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB895_2150 SM00474 3'-5' exonuclease AB895_2150 SM00475 5'-3' exonuclease AB895_2150 SM00482 DNA polymerase A domain AB895_2154 SM00382 ATPases associated with a variety of cellular activities AB895_2156 SM00347 helix_turn_helix multiple antibiotic resistance protein AB895_2160 SM00331 Sigma factor PP2C-like phosphatases AB895_2214 SM00342 helix_turn_helix, arabinose operon control protein AB895_2221 SM00903 Flavin reductase like domain AB895_2225 SM00671 Sel1-like repeats. AB895_2229 SM00448 cheY-homologous receiver domain AB895_2229 SM00862 Transcriptional regulatory protein, C terminal AB895_2230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB895_2230 SM00387 Histidine kinase-like ATPases AB895_2230 SM00388 His Kinase A (phosphoacceptor) domain AB895_2232 SM00267 diguanylate cyclase AB895_2237 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB895_2238 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB895_2238 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB895_2247 SM00357 Cold shock protein domain AB895_2276 SM00382 ATPases associated with a variety of cellular activities AB895_2276 SM00962 SRP54-type protein, GTPase domain AB895_2276 SM00963 SRP54-type protein, helical bundle domain AB895_2280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_2282 SM00771 ZipA, C-terminal domain (FtsZ-binding) AB895_2283 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB895_2283 SM00292 breast cancer carboxy-terminal domain AB895_2283 SM00532 Ligase N family AB895_2293 SM00363 S4 RNA-binding domain AB895_2300 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB895_2301 SM00822 AB895_2301 AB895_2303 SM00257 Lysin motif AB895_2312 SM01400 AB895_2312 AB895_2320 SM00028 Tetratricopeptide repeats AB895_2322 SM00400 zinc finger AB895_2322 SM00493 AB895_2322 AB895_2324 SM00363 S4 RNA-binding domain AB895_2333 SM01329 AB895_2333 AB895_2346 SM00825 Beta-ketoacyl synthase AB895_2350 SM00838 Elongation factor G C-terminus AB895_2350 SM00889 Elongation factor G, domain IV AB895_2358 SM00843 AB895_2358 AB895_2365 SM00563 Phosphate acyltransferases AB895_2379 SM00382 ATPases associated with a variety of cellular activities AB895_2390 SM01004 Delta-aminolevulinic acid dehydratase AB895_2398 SM00901 AB895_2398 AB895_2428 SM01040 BRO family, N-terminal domain AB895_2437 SM01130 AB895_2437 AB895_2441 SM00965 Secretin and TonB N terminus short domain AB895_2467 SM01322 AB895_2467 AB895_2475 SM00346 helix_turn_helix isocitrate lyase regulation AB895_2479 SM00822 AB895_2479 AB895_2493 SM00342 helix_turn_helix, arabinose operon control protein AB895_2498 SM00822 AB895_2498 AB895_2501 SM00861 Transketolase, pyrimidine binding domain AB895_2502 SM01018 B12 binding domain AB895_2516 SM00947 Carbonic anhydrase AB895_2518 SM00382 ATPases associated with a variety of cellular activities AB895_2538 SM01091 Transporter associated domain AB895_2549 SM00988 UreE urease accessory protein, N-terminal domain AB895_2559 SM00478 endonuclease III AB895_2561 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB895_2565 SM00382 ATPases associated with a variety of cellular activities AB895_2565 SM00464 Found in ATP-dependent protease La (LON) AB895_2575 SM01011 Aminopeptidase P, N-terminal domain AB895_2580 SM00422 helix_turn_helix, mercury resistance AB895_2592 SM00479 AB895_2592 AB895_2593 SM00257 Lysin motif AB895_2597 SM00382 ATPases associated with a variety of cellular activities AB895_2601 SM00479 AB895_2601 AB895_2603 SM00267 diguanylate cyclase AB895_2621 SM00382 ATPases associated with a variety of cellular activities AB895_2623 SM01007 Class II Aldolase and Adducin N-terminal domain AB895_2624 SM00062 Bacterial periplasmic substrate-binding proteins AB895_2660 SM00564 beta-propeller repeat AB895_2664 SM00506 Appr-1"-p processing enzyme AB895_2682 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_2682 SM00895 AB895_2682 AB895_2685 SM00344 helix_turn_helix ASNC type AB895_2712 SM00530 Helix-turn-helix XRE-family like proteins AB895_2721 SM00507 HNH nucleases AB895_2761 SM00232 JAB/MPN domain AB895_2770 SM00357 Cold shock protein domain AB895_2774 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB895_2775 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB895_2777 SM00788 Adenylosuccinate synthetase AB895_2781 SM00100 Cyclic nucleotide-monophosphate binding domain AB895_2781 SM00419 helix_turn_helix, cAMP Regulatory protein AB895_2785 SM00382 ATPases associated with a variety of cellular activities AB895_2785 SM01086 C-terminal, D2-small domain, of ClpB protein AB895_2788 SM00981 AB895_2788 AB895_2804 SM00382 ATPases associated with a variety of cellular activities AB895_2804 SM00487 DEAD-like helicases superfamily AB895_2804 SM00490 helicase superfamily c-terminal domain AB895_2804 SM00847 Helicase associated domain (HA2) Add an annotation AB895_2816 SM00422 helix_turn_helix, mercury resistance AB895_2826 SM00530 Helix-turn-helix XRE-family like proteins AB895_2830 SM00357 Cold shock protein domain AB895_2846 SM00840 AB895_2846 AB895_2847 SM00116 Domain in cystathionine beta-synthase and other proteins. AB895_2851 SM00382 ATPases associated with a variety of cellular activities AB895_2853 SM00382 ATPases associated with a variety of cellular activities AB895_2862 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB895_2862 SM00534 ATPase domain of DNA mismatch repair MUTS family AB895_2864 SM00344 helix_turn_helix ASNC type AB895_2866 SM00052 Putative diguanylate phosphodiesterase AB895_2872 SM00422 helix_turn_helix, mercury resistance AB895_2885 SM00796 Allophanate hydrolase subunit 1 AB895_2885 SM00797 Allophanate hydrolase subunit 2 AB895_2886 SM00878 Biotin carboxylase C-terminal domain AB895_2888 SM00671 Sel1-like repeats. AB895_2893 SM00829 Enoylreductase AB895_2900 SM00422 helix_turn_helix, mercury resistance AB895_2902 SM01130 AB895_2902 AB895_2904 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_2904 SM00895 AB895_2904 AB895_2909 SM00342 helix_turn_helix, arabinose operon control protein AB895_2939 SM00342 helix_turn_helix, arabinose operon control protein AB895_2944 SM01060 AB895_2944 AB895_2947 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_2947 SM00895 AB895_2947 AB895_2950 SM00903 Flavin reductase like domain AB895_2960 SM00346 helix_turn_helix isocitrate lyase regulation AB895_2962 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_2962 SM00866 AB895_2962 AB895_2964 SM00382 ATPases associated with a variety of cellular activities AB895_2972 SM00346 helix_turn_helix isocitrate lyase regulation AB895_2976 SM00346 helix_turn_helix isocitrate lyase regulation AB895_2983 SM00882 Coenzyme A transferase AB895_2984 SM00882 Coenzyme A transferase AB895_2993 SM00878 Biotin carboxylase C-terminal domain AB895_3011 SM01236 AB895_3011 AB895_3012 SM01060 AB895_3012 AB895_3015 SM00384 DNA binding domain with preference for A/T rich regions AB895_3019 SM00344 helix_turn_helix ASNC type AB895_3021 SM00387 Histidine kinase-like ATPases AB895_3021 SM00388 His Kinase A (phosphoacceptor) domain AB895_3021 SM00448 cheY-homologous receiver domain AB895_3022 SM00421 helix_turn_helix, Lux Regulon AB895_3022 SM00448 cheY-homologous receiver domain AB895_3026 SM00382 ATPases associated with a variety of cellular activities AB895_3027 SM00062 Bacterial periplasmic substrate-binding proteins AB895_3028 SM00062 Bacterial periplasmic substrate-binding proteins AB895_3035 SM00450 Rhodanese Homology Domain AB895_3036 SM00822 AB895_3036 AB895_3043 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3055 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB895_3059 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3069 SM00062 Bacterial periplasmic substrate-binding proteins AB895_3070 SM00382 ATPases associated with a variety of cellular activities AB895_3075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3075 SM00895 AB895_3075 AB895_3082 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB895_3092 SM00481 DNA polymerase alpha chain like domain AB895_3093 SM00870 AB895_3093 AB895_3098 SM00342 helix_turn_helix, arabinose operon control protein AB895_3101 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB895_3108 SM00100 Cyclic nucleotide-monophosphate binding domain AB895_3108 SM00419 helix_turn_helix, cAMP Regulatory protein AB895_3112 SM00382 ATPases associated with a variety of cellular activities AB895_3112 SM00930 AB895_3112 AB895_3120 SM00062 Bacterial periplasmic substrate-binding proteins AB895_3123 SM00382 ATPases associated with a variety of cellular activities AB895_3125 SM00344 helix_turn_helix ASNC type AB895_3137 SM00530 Helix-turn-helix XRE-family like proteins AB895_3141 SM00382 ATPases associated with a variety of cellular activities AB895_3182 SM00232 JAB/MPN domain AB895_3192 SM00563 Phosphate acyltransferases AB895_3194 SM01236 AB895_3194 AB895_3205 SM00342 helix_turn_helix, arabinose operon control protein AB895_3213 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_3213 SM00876 Biotin and Thiamin Synthesis associated domain AB895_3218 SM00530 Helix-turn-helix XRE-family like proteins AB895_3226 SM00861 Transketolase, pyrimidine binding domain AB895_3228 SM00867 YceI-like domain AB895_3235 SM00344 helix_turn_helix ASNC type AB895_3239 SM00342 helix_turn_helix, arabinose operon control protein AB895_3241 SM00382 ATPases associated with a variety of cellular activities AB895_3245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB895_3247 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB895_3259 SM00470 ParB-like nuclease domain AB895_3262 SM00382 ATPases associated with a variety of cellular activities AB895_3274 SM00986 Uracil DNA glycosylase superfamily AB895_3274 SM00987 UreE urease accessory protein, C-terminal domain AB895_3279 SM00316 Ribosomal protein S1-like RNA-binding domain AB895_3280 SM00411 bacterial (prokaryotic) histone like domain AB895_3282 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB895_3285 SM00342 helix_turn_helix, arabinose operon control protein AB895_3297 SM00382 ATPases associated with a variety of cellular activities AB895_3330 SM00232 JAB/MPN domain AB895_3350 SM00382 ATPases associated with a variety of cellular activities AB895_3361 SM00487 DEAD-like helicases superfamily AB895_3361 SM00490 helicase superfamily c-terminal domain AB895_3361 SM00982 AB895_3361 AB895_3361 SM01058 CarD-like/TRCF domain AB895_3363 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AB895_3366 SM00271 DnaJ molecular chaperone homology domain AB895_3373 SM00411 bacterial (prokaryotic) histone like domain AB895_3375 SM00342 helix_turn_helix, arabinose operon control protein AB895_3394 SM01006 Siderophore biosynthesis protein domain AB895_3400 SM00855 Phosphoglycerate mutase family AB895_3411 SM00382 ATPases associated with a variety of cellular activities AB895_3419 SM01324 AB895_3419 AB895_3432 SM00493 AB895_3432 AB895_3435 SM00341 Helicase and RNase D C-terminal AB895_3441 SM00382 ATPases associated with a variety of cellular activities AB895_3446 SM00267 diguanylate cyclase AB895_3450 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_3452 SM00861 Transketolase, pyrimidine binding domain AB895_3456 SM00829 Enoylreductase AB895_3458 SM00382 ATPases associated with a variety of cellular activities AB895_3459 SM00849 Metallo-beta-lactamase superfamily AB895_3465 SM00342 helix_turn_helix, arabinose operon control protein AB895_3469 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3469 SM00866 AB895_3469 AB895_3474 SM00382 ATPases associated with a variety of cellular activities AB895_3475 SM00567 E-Z type HEAT repeats AB895_3486 SM00882 Coenzyme A transferase AB895_3487 SM00882 Coenzyme A transferase AB895_3494 SM00342 helix_turn_helix, arabinose operon control protein AB895_3499 SM00903 Flavin reductase like domain AB895_3501 SM00342 helix_turn_helix, arabinose operon control protein AB895_3508 SM00382 ATPases associated with a variety of cellular activities AB895_3519 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_3524 SM00155 Phospholipase D. Active site motifs. AB895_3529 SM00829 Enoylreductase AB895_3562 SM00825 Beta-ketoacyl synthase AB895_3563 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB895_3566 SM00825 Beta-ketoacyl synthase AB895_3570 SM00530 Helix-turn-helix XRE-family like proteins AB895_3571 SM00530 Helix-turn-helix XRE-family like proteins AB895_3576 SM00448 cheY-homologous receiver domain AB895_3576 SM00862 Transcriptional regulatory protein, C terminal AB895_3577 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB895_3577 SM00387 Histidine kinase-like ATPases AB895_3577 SM00388 His Kinase A (phosphoacceptor) domain AB895_3579 SM00342 helix_turn_helix, arabinose operon control protein AB895_3581 SM00822 AB895_3581 AB895_3582 SM00822 AB895_3582 AB895_3587 SM00346 helix_turn_helix isocitrate lyase regulation AB895_3605 SM00530 Helix-turn-helix XRE-family like proteins AB895_3621 SM01400 AB895_3621 AB895_3623 SM00342 helix_turn_helix, arabinose operon control protein AB895_3625 SM00382 ATPases associated with a variety of cellular activities AB895_3629 SM00829 Enoylreductase AB895_3632 SM00342 helix_turn_helix, arabinose operon control protein AB895_3649 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3649 SM00866 AB895_3649 AB895_3655 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AB895_3655 SM00912 haemagglutination activity domain AB895_3663 SM00822 AB895_3663 AB895_3672 SM00422 helix_turn_helix, mercury resistance AB895_3682 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3682 SM00895 AB895_3682 AB895_3685 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB895_3688 SM00882 Coenzyme A transferase AB895_3689 SM00882 Coenzyme A transferase AB895_3696 SM00342 helix_turn_helix, arabinose operon control protein AB895_3697 SM00903 Flavin reductase like domain AB895_3706 SM00347 helix_turn_helix multiple antibiotic resistance protein AB895_3710 SM00855 Phosphoglycerate mutase family AB895_3714 SM00346 helix_turn_helix isocitrate lyase regulation AB895_3715 SM00849 Metallo-beta-lactamase superfamily AB895_3719 SM00564 beta-propeller repeat AB895_3721 SM00710 Parallel beta-helix repeats AB895_3728 SM00998 Adenylosuccinate lyase C-terminus AB895_3730 SM00882 Coenzyme A transferase AB895_3731 SM00882 Coenzyme A transferase AB895_3735 SM01192 AB895_3735 AB895_3735 SM01193 AB895_3735 AB895_3748 SM00382 ATPases associated with a variety of cellular activities AB895_3748 SM01086 C-terminal, D2-small domain, of ClpB protein AB895_3751 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB895_3760 SM01264 AB895_3760 AB895_3771 SM00382 ATPases associated with a variety of cellular activities AB895_3771 SM00962 SRP54-type protein, GTPase domain AB895_3771 SM00963 SRP54-type protein, helical bundle domain AB895_3777 SM00116 Domain in cystathionine beta-synthase and other proteins. AB895_3791 SM00347 helix_turn_helix multiple antibiotic resistance protein AB895_3793 SM00052 Putative diguanylate phosphodiesterase AB895_3793 SM00091 PAS domain AB895_3793 SM00267 diguanylate cyclase AB895_3802 SM00344 helix_turn_helix ASNC type AB895_3808 SM00363 S4 RNA-binding domain AB895_3809 SM00382 ATPases associated with a variety of cellular activities AB895_3815 SM00935 Outer membrane protein (OmpH-like) AB895_3817 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB895_3823 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_3825 SM00091 PAS domain AB895_3825 SM00387 Histidine kinase-like ATPases AB895_3825 SM00388 His Kinase A (phosphoacceptor) domain AB895_3826 SM00382 ATPases associated with a variety of cellular activities AB895_3826 SM00448 cheY-homologous receiver domain AB895_3843 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB895_3845 SM00852 Probable molybdopterin binding domain AB895_3846 SM00852 Probable molybdopterin binding domain AB895_3849 SM00729 Elongator protein 3, MiaB family, Radical SAM AB895_3850 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB895_3852 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB895_3855 SM00448 cheY-homologous receiver domain AB895_3855 SM01012 AB895_3855 AB895_3867 SM00878 Biotin carboxylase C-terminal domain