locus-tag class description BJAB0715_00003 PF00579 tRNA synthetases class I (W and Y) BJAB0715_00004 PF03702 Anhydro-N-acetylmuramic acid kinase BJAB0715_00005 PF00561 alpha/beta hydrolase fold BJAB0715_00006 PF01521 Iron-sulphur cluster biosynthesis BJAB0715_00010 PF12848 ABC transporter BJAB0715_00010 PF00005 ABC transporter BJAB0715_00011 PF09335 SNARE associated Golgi protein BJAB0715_00013 PF18053 DNA gyrase B subunit insert domain BJAB0715_00013 PF00986 DNA gyrase B subunit, carboxyl terminus BJAB0715_00013 PF00204 DNA gyrase B BJAB0715_00013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00013 PF01751 Toprim domain BJAB0715_00014 PF02463 RecF/RecN/SMC N terminal domain BJAB0715_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain BJAB0715_00015 PF02767 DNA polymerase III beta subunit, central domain BJAB0715_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain BJAB0715_00016 PF00308 Bacterial dnaA protein BJAB0715_00016 PF11638 DnaA N-terminal domain BJAB0715_00016 PF08299 Bacterial dnaA protein helix-turn-helix BJAB0715_00017 PF00468 Ribosomal protein L34 BJAB0715_00018 PF00825 Ribonuclease P BJAB0715_00019 PF01809 Putative membrane protein insertion efficiency factor BJAB0715_00020 PF14849 YidC periplasmic domain BJAB0715_00020 PF02096 60Kd inner membrane protein BJAB0715_00021 PF12631 MnmE helical domain BJAB0715_00021 PF10396 GTP-binding protein TrmE N-terminus BJAB0715_00021 PF01926 50S ribosome-binding GTPase BJAB0715_00022 PF02583 Metal-sensitive transcriptional repressor BJAB0715_00023 PF01545 Cation efflux family BJAB0715_00023 PF16916 Dimerisation domain of Zinc Transporter BJAB0715_00024 PF10411 Disulfide bond isomerase protein N-terminus BJAB0715_00024 PF13098 Thioredoxin-like domain BJAB0715_00026 PF00156 Phosphoribosyl transferase domain BJAB0715_00028 PF01979 Amidohydrolase family BJAB0715_00029 PF00355 Rieske [2Fe-2S] domain BJAB0715_00030 PF03738 Glutathionylspermidine synthase preATP-grasp BJAB0715_00032 PF03741 Integral membrane protein TerC family BJAB0715_00033 PF01569 PAP2 superfamily BJAB0715_00035 PF01225 Mur ligase family, catalytic domain BJAB0715_00035 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_00035 PF08245 Mur ligase middle domain BJAB0715_00038 PF00731 AIR carboxylase BJAB0715_00039 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BJAB0715_00039 PF02222 ATP-grasp domain BJAB0715_00040 PF13406 Transglycosylase SLT domain BJAB0715_00042 PF00413 Matrixin BJAB0715_00045 PF00012 Hsp70 protein BJAB0715_00046 PF01025 GrpE BJAB0715_00047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00047 PF03466 LysR substrate binding domain BJAB0715_00051 PF07859 alpha/beta hydrolase fold BJAB0715_00052 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJAB0715_00057 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_00058 PF01252 Signal peptidase (SPase) II BJAB0715_00059 PF06827 Zinc finger found in FPG and IleRS BJAB0715_00059 PF00133 tRNA synthetases class I (I, L, M and V) BJAB0715_00059 PF08264 Anticodon-binding domain of tRNA BJAB0715_00060 PF06574 FAD synthetase BJAB0715_00060 PF01687 Riboflavin kinase BJAB0715_00062 PF01048 Phosphorylase superfamily BJAB0715_00063 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_00063 PF08362 YcdC-like protein, C-terminal region BJAB0715_00064 PF00005 ABC transporter BJAB0715_00065 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_00066 PF00296 Luciferase-like monooxygenase BJAB0715_00067 PF09084 NMT1/THI5 like BJAB0715_00068 PF09084 NMT1/THI5 like BJAB0715_00069 PF00583 Acetyltransferase (GNAT) family BJAB0715_00069 PF00696 Amino acid kinase family BJAB0715_00072 PF00106 short chain dehydrogenase BJAB0715_00073 PF13419 Haloacid dehalogenase-like hydrolase BJAB0715_00075 PF01323 DSBA-like thioredoxin domain BJAB0715_00076 PF08360 QacR-like protein, C-terminal region BJAB0715_00076 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_00077 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_00078 PF00175 Oxidoreductase NAD-binding domain BJAB0715_00079 PF00487 Fatty acid desaturase BJAB0715_00080 PF01138 3' exoribonuclease family, domain 1 BJAB0715_00080 PF03725 3' exoribonuclease family, domain 2 BJAB0715_00082 PF05506 Domain of unknown function (DUF756) BJAB0715_00082 PF04185 Phosphoesterase family BJAB0715_00084 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BJAB0715_00084 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BJAB0715_00085 PF01510 N-acetylmuramoyl-L-alanine amidase BJAB0715_00086 PF03023 Lipid II flippase MurJ BJAB0715_00087 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJAB0715_00087 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_00088 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJAB0715_00088 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_00090 PF13614 AAA domain BJAB0715_00090 PF13807 G-rich domain on putative tyrosine kinase BJAB0715_00090 PF02706 Chain length determinant protein BJAB0715_00091 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJAB0715_00092 PF02563 Polysaccharide biosynthesis/export protein BJAB0715_00092 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BJAB0715_00092 PF10531 SLBB domain BJAB0715_00093 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJAB0715_00093 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJAB0715_00093 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJAB0715_00094 PF02719 Polysaccharide biosynthesis protein BJAB0715_00095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJAB0715_00096 PF02350 UDP-N-acetylglucosamine 2-epimerase BJAB0715_00097 PF08666 SAF domain BJAB0715_00097 PF03102 NeuB family BJAB0715_00099 PF00483 Nucleotidyl transferase BJAB0715_00100 PF02348 Cytidylyltransferase BJAB0715_00101 PF01943 Polysaccharide biosynthesis protein BJAB0715_00102 PF07922 Glycosyltransferase family 52 BJAB0715_00104 PF02719 Polysaccharide biosynthesis protein BJAB0715_00104 PF08485 Polysaccharide biosynthesis protein C-terminal BJAB0715_00105 PF01370 NAD dependent epimerase/dehydratase family BJAB0715_00106 PF02350 UDP-N-acetylglucosamine 2-epimerase BJAB0715_00107 PF13579 Glycosyl transferase 4-like domain BJAB0715_00108 PF01370 NAD dependent epimerase/dehydratase family BJAB0715_00109 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BJAB0715_00109 PF00953 Glycosyl transferase family 4 BJAB0715_00110 PF02397 Bacterial sugar transferase BJAB0715_00111 PF00483 Nucleotidyl transferase BJAB0715_00112 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJAB0715_00112 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJAB0715_00112 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJAB0715_00113 PF00342 Phosphoglucose isomerase BJAB0715_00114 PF16363 GDP-mannose 4,6 dehydratase BJAB0715_00115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJAB0715_00115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJAB0715_00115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJAB0715_00115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJAB0715_00116 PF02652 L-lactate permease BJAB0715_00117 PF07729 FCD domain BJAB0715_00117 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_00118 PF01070 FMN-dependent dehydrogenase BJAB0715_00119 PF09330 D-lactate dehydrogenase, membrane binding BJAB0715_00119 PF01565 FAD binding domain BJAB0715_00120 PF00155 Aminotransferase class I and II BJAB0715_00121 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_00121 PF07729 FCD domain BJAB0715_00123 PF00285 Citrate synthase, C-terminal domain BJAB0715_00124 PF00330 Aconitase family (aconitate hydratase) BJAB0715_00124 PF00694 Aconitase C-terminal domain BJAB0715_00125 PF00665 Integrase core domain BJAB0715_00125 PF13936 Helix-turn-helix domain BJAB0715_00138 PF00849 RNA pseudouridylate synthase BJAB0715_00141 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_00141 PF00593 TonB dependent receptor BJAB0715_00143 PF01037 Lrp/AsnC ligand binding domain BJAB0715_00144 PF01266 FAD dependent oxidoreductase BJAB0715_00145 PF01168 Alanine racemase, N-terminal domain BJAB0715_00145 PF00842 Alanine racemase, C-terminal domain BJAB0715_00146 PF01042 Endoribonuclease L-PSP BJAB0715_00147 PF00324 Amino acid permease BJAB0715_00148 PF00324 Amino acid permease BJAB0715_00150 PF00171 Aldehyde dehydrogenase family BJAB0715_00151 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJAB0715_00151 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJAB0715_00152 PF00501 AMP-binding enzyme BJAB0715_00152 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00153 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_00153 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_00153 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_00154 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_00155 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_00156 PF07690 Major Facilitator Superfamily BJAB0715_00156 PF00083 Sugar (and other) transporter BJAB0715_00157 PF00765 Autoinducer synthase BJAB0715_00159 PF00196 Bacterial regulatory proteins, luxR family BJAB0715_00159 PF03472 Autoinducer binding domain BJAB0715_00160 PF00501 AMP-binding enzyme BJAB0715_00161 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_00161 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_00161 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_00162 PF08242 Methyltransferase domain BJAB0715_00162 PF00109 Beta-ketoacyl synthase, N-terminal domain BJAB0715_00162 PF00975 Thioesterase domain BJAB0715_00162 PF14765 Polyketide synthase dehydratase BJAB0715_00162 PF00550 Phosphopantetheine attachment site BJAB0715_00162 PF02801 Beta-ketoacyl synthase, C-terminal domain BJAB0715_00162 PF16197 Ketoacyl-synthetase C-terminal extension BJAB0715_00163 PF07993 Male sterility protein BJAB0715_00163 PF00550 Phosphopantetheine attachment site BJAB0715_00163 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00163 PF00501 AMP-binding enzyme BJAB0715_00163 PF00668 Condensation domain BJAB0715_00164 PF00501 AMP-binding enzyme BJAB0715_00164 PF00668 Condensation domain BJAB0715_00164 PF00975 Thioesterase domain BJAB0715_00164 PF00550 Phosphopantetheine attachment site BJAB0715_00164 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00167 PF16363 GDP-mannose 4,6 dehydratase BJAB0715_00168 PF01648 4'-phosphopantetheinyl transferase superfamily BJAB0715_00169 PF01722 BolA-like protein BJAB0715_00171 PF13614 AAA domain BJAB0715_00174 PF09335 SNARE associated Golgi protein BJAB0715_00175 PF07681 DoxX BJAB0715_00176 PF04286 Protein of unknown function (DUF445) BJAB0715_00177 PF00117 Glutamine amidotransferase class-I BJAB0715_00177 PF00958 GMP synthase C terminal domain BJAB0715_00177 PF02540 NAD synthase BJAB0715_00178 PF01909 Nucleotidyltransferase domain BJAB0715_00178 PF13427 Domain of unknown function (DUF4111) BJAB0715_00179 PF03551 Transcriptional regulator PadR-like family BJAB0715_00181 PF02678 Pirin BJAB0715_00181 PF05726 Pirin C-terminal cupin domain BJAB0715_00185 PF03485 Arginyl tRNA synthetase N terminal domain BJAB0715_00185 PF05746 DALR anticodon binding domain BJAB0715_00185 PF00750 tRNA synthetases class I (R) BJAB0715_00186 PF03949 Malic enzyme, NAD binding domain BJAB0715_00186 PF00390 Malic enzyme, N-terminal domain BJAB0715_00188 PF04261 Dyp-type peroxidase family BJAB0715_00189 PF01810 LysE type translocator BJAB0715_00190 PF00950 ABC 3 transport family BJAB0715_00191 PF00005 ABC transporter BJAB0715_00195 PF00119 ATP synthase A chain BJAB0715_00196 PF00137 ATP synthase subunit C BJAB0715_00197 PF00430 ATP synthase B/B' CF(0) BJAB0715_00198 PF00213 ATP synthase delta (OSCP) subunit BJAB0715_00199 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJAB0715_00199 PF00306 ATP synthase alpha/beta chain, C terminal domain BJAB0715_00199 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJAB0715_00200 PF00231 ATP synthase BJAB0715_00201 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJAB0715_00201 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJAB0715_00202 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BJAB0715_00203 PF11008 Protein of unknown function (DUF2846) BJAB0715_00205 PF00255 Glutathione peroxidase BJAB0715_00207 PF07690 Major Facilitator Superfamily BJAB0715_00208 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_00209 PF00892 EamA-like transporter family BJAB0715_00210 PF01300 Telomere recombination BJAB0715_00211 PF17782 DprA winged helix domain BJAB0715_00211 PF02481 DNA recombination-mediator protein A BJAB0715_00213 PF01327 Polypeptide deformylase BJAB0715_00218 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_00223 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_00225 PF03358 NADPH-dependent FMN reductase BJAB0715_00229 PF08497 Radical SAM N-terminal BJAB0715_00229 PF04055 Radical SAM superfamily BJAB0715_00229 PF11842 Domain of unknown function (DUF3362) BJAB0715_00232 PF11799 impB/mucB/samB family C-terminal domain BJAB0715_00232 PF11798 IMS family HHH motif BJAB0715_00232 PF00817 impB/mucB/samB family BJAB0715_00234 PF07690 Major Facilitator Superfamily BJAB0715_00235 PF03641 Possible lysine decarboxylase BJAB0715_00237 PF03741 Integral membrane protein TerC family BJAB0715_00237 PF03471 Transporter associated domain BJAB0715_00238 PF02810 SEC-C motif BJAB0715_00239 PF03458 UPF0126 domain BJAB0715_00240 PF07690 Major Facilitator Superfamily BJAB0715_00241 PF03989 DNA gyrase C-terminal domain, beta-propeller BJAB0715_00241 PF00521 DNA gyrase/topoisomerase IV, subunit A BJAB0715_00242 PF00501 AMP-binding enzyme BJAB0715_00242 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00245 PF00719 Inorganic pyrophosphatase BJAB0715_00246 PF03573 outer membrane porin, OprD family BJAB0715_00247 PF13276 HTH-like domain BJAB0715_00247 PF13683 Integrase core domain BJAB0715_00248 PF01527 Transposase BJAB0715_00250 PF00701 Dihydrodipicolinate synthetase family BJAB0715_00251 PF00596 Class II Aldolase and Adducin N-terminal domain BJAB0715_00252 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_00252 PF00155 Aminotransferase class I and II BJAB0715_00253 PF01078 Magnesium chelatase, subunit ChlI BJAB0715_00253 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJAB0715_00255 PF00665 Integrase core domain BJAB0715_00260 PF00072 Response regulator receiver domain BJAB0715_00260 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_00261 PF18698 Histidine kinase sensor domain BJAB0715_00261 PF00672 HAMP domain BJAB0715_00261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00261 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_00261 PF00989 PAS fold BJAB0715_00262 PF07690 Major Facilitator Superfamily BJAB0715_00263 PF00873 AcrB/AcrD/AcrF family BJAB0715_00264 PF00529 HlyD membrane-fusion protein of T1SS BJAB0715_00264 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_00266 PF01078 Magnesium chelatase, subunit ChlI BJAB0715_00266 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJAB0715_00268 PF00543 Nitrogen regulatory protein P-II BJAB0715_00269 PF00909 Ammonium Transporter Family BJAB0715_00270 PF03477 ATP cone domain BJAB0715_00271 PF01872 RibD C-terminal domain BJAB0715_00271 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJAB0715_00273 PF00677 Lumazine binding domain BJAB0715_00277 PF00883 Cytosol aminopeptidase family, catalytic domain BJAB0715_00277 PF02789 Cytosol aminopeptidase family, N-terminal domain BJAB0715_00280 PF01676 Metalloenzyme superfamily BJAB0715_00280 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BJAB0715_00281 PF00595 PDZ domain BJAB0715_00281 PF03572 Peptidase family S41 BJAB0715_00282 PF00158 Sigma-54 interaction domain BJAB0715_00282 PF02954 Bacterial regulatory protein, Fis family BJAB0715_00282 PF00072 Response regulator receiver domain BJAB0715_00283 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_00283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00284 PF00072 Response regulator receiver domain BJAB0715_00284 PF00196 Bacterial regulatory proteins, luxR family BJAB0715_00285 PF00768 D-alanyl-D-alanine carboxypeptidase BJAB0715_00286 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_00287 PF03447 Homoserine dehydrogenase, NAD binding domain BJAB0715_00287 PF01842 ACT domain BJAB0715_00287 PF00742 Homoserine dehydrogenase BJAB0715_00288 PF13098 Thioredoxin-like domain BJAB0715_00288 PF10411 Disulfide bond isomerase protein N-terminus BJAB0715_00289 PF02899 Phage integrase, N-terminal SAM-like domain BJAB0715_00289 PF00589 Phage integrase family BJAB0715_00291 PF02421 Ferrous iron transport protein B BJAB0715_00291 PF07664 Ferrous iron transport protein B C terminus BJAB0715_00291 PF07670 Nucleoside recognition BJAB0715_00293 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_00293 PF08245 Mur ligase middle domain BJAB0715_00294 PF01098 Cell cycle protein BJAB0715_00295 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJAB0715_00296 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJAB0715_00297 PF00149 Calcineurin-like phosphoesterase BJAB0715_00298 PF00293 NUDIX domain BJAB0715_00299 PF13667 ThiC-associated domain BJAB0715_00299 PF01964 Radical SAM ThiC family BJAB0715_00302 PF00892 EamA-like transporter family BJAB0715_00303 PF02321 Outer membrane efflux protein BJAB0715_00304 PF01895 PhoU domain BJAB0715_00305 PF04362 Bacterial Fe(2+) trafficking BJAB0715_00306 PF00206 Lyase BJAB0715_00306 PF14698 Argininosuccinate lyase C-terminal BJAB0715_00307 PF06580 Histidine kinase BJAB0715_00307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00307 PF07694 5TMR of 5TMR-LYT BJAB0715_00308 PF00072 Response regulator receiver domain BJAB0715_00308 PF04397 LytTr DNA-binding domain BJAB0715_00309 PF03900 Porphobilinogen deaminase, C-terminal domain BJAB0715_00309 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BJAB0715_00314 PF13936 Helix-turn-helix domain BJAB0715_00314 PF00665 Integrase core domain BJAB0715_00315 PF00816 H-NS histone family BJAB0715_00318 PF00263 Bacterial type II and III secretion system protein BJAB0715_00318 PF03958 Bacterial type II/III secretion system short domain BJAB0715_00319 PF12401 Protein of unknown function (DUF2662) BJAB0715_00319 PF00498 FHA domain BJAB0715_00320 PF13419 Haloacid dehalogenase-like hydrolase BJAB0715_00321 PF04715 Anthranilate synthase component I, N terminal region BJAB0715_00321 PF00425 chorismate binding enzyme BJAB0715_00322 PF03144 Elongation factor Tu domain 2 BJAB0715_00322 PF00009 Elongation factor Tu GTP binding domain BJAB0715_00322 PF03143 Elongation factor Tu C-terminal domain BJAB0715_00323 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BJAB0715_00324 PF02357 Transcription termination factor nusG BJAB0715_00324 PF00467 KOW motif BJAB0715_00325 PF03946 Ribosomal protein L11, N-terminal domain BJAB0715_00325 PF00298 Ribosomal protein L11, RNA binding domain BJAB0715_00326 PF00687 Ribosomal protein L1p/L10e family BJAB0715_00327 PF00466 Ribosomal protein L10 BJAB0715_00328 PF00542 Ribosomal protein L7/L12 C-terminal domain BJAB0715_00328 PF16320 Ribosomal protein L7/L12 dimerisation domain BJAB0715_00329 PF04561 RNA polymerase Rpb2, domain 2 BJAB0715_00329 PF04565 RNA polymerase Rpb2, domain 3 BJAB0715_00329 PF04563 RNA polymerase beta subunit BJAB0715_00329 PF04560 RNA polymerase Rpb2, domain 7 BJAB0715_00329 PF10385 RNA polymerase beta subunit external 1 domain BJAB0715_00329 PF00562 RNA polymerase Rpb2, domain 6 BJAB0715_00330 PF00623 RNA polymerase Rpb1, domain 2 BJAB0715_00330 PF05000 RNA polymerase Rpb1, domain 4 BJAB0715_00330 PF04983 RNA polymerase Rpb1, domain 3 BJAB0715_00330 PF04997 RNA polymerase Rpb1, domain 1 BJAB0715_00330 PF04998 RNA polymerase Rpb1, domain 5 BJAB0715_00334 PF00561 alpha/beta hydrolase fold BJAB0715_00335 PF03553 Na+/H+ antiporter family BJAB0715_00335 PF13726 Na+-H+ antiporter family BJAB0715_00338 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00338 PF00183 Hsp90 protein BJAB0715_00341 PF01323 DSBA-like thioredoxin domain BJAB0715_00343 PF09278 MerR, DNA binding BJAB0715_00343 PF00376 MerR family regulatory protein BJAB0715_00347 PF00108 Thiolase, N-terminal domain BJAB0715_00347 PF02803 Thiolase, C-terminal domain BJAB0715_00348 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJAB0715_00348 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_00348 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJAB0715_00351 PF01541 GIY-YIG catalytic domain BJAB0715_00351 PF08459 UvrC Helix-hairpin-helix N-terminal BJAB0715_00351 PF02151 UvrB/uvrC motif BJAB0715_00353 PF01066 CDP-alcohol phosphatidyltransferase BJAB0715_00354 PF12833 Helix-turn-helix domain BJAB0715_00354 PF02805 Metal binding domain of Ada BJAB0715_00354 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJAB0715_00354 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BJAB0715_00359 PF13533 Biotin-lipoyl like BJAB0715_00360 PF03652 Holliday junction resolvase BJAB0715_00361 PF02622 Uncharacterized ACR, COG1678 BJAB0715_00362 PF02463 RecF/RecN/SMC N terminal domain BJAB0715_00364 PF06865 Pyrimidine/purine nucleoside phosphorylase BJAB0715_00365 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJAB0715_00365 PF00588 SpoU rRNA Methylase family BJAB0715_00367 PF01121 Dephospho-CoA kinase BJAB0715_00368 PF01478 Type IV leader peptidase family BJAB0715_00368 PF06750 Bacterial Peptidase A24 N-terminal domain BJAB0715_00369 PF00482 Type II secretion system (T2SS), protein F BJAB0715_00370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJAB0715_00370 PF00437 Type II/IV secretion system protein BJAB0715_00371 PF00121 Triosephosphate isomerase BJAB0715_00372 PF03840 Preprotein translocase SecG subunit BJAB0715_00373 PF17384 RimP C-terminal SH3 domain BJAB0715_00373 PF02576 RimP N-terminal domain BJAB0715_00374 PF13184 NusA-like KH domain BJAB0715_00374 PF00575 S1 RNA binding domain BJAB0715_00374 PF08529 NusA N-terminal domain BJAB0715_00375 PF04760 Translation initiation factor IF-2, N-terminal region BJAB0715_00375 PF00009 Elongation factor Tu GTP binding domain BJAB0715_00375 PF11987 Translation-initiation factor 2 BJAB0715_00375 PF08364 Bacterial translation initiation factor IF-2 associated region BJAB0715_00376 PF02033 Ribosome-binding factor A BJAB0715_00378 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BJAB0715_00380 PF00361 Proton-conducting membrane transporter BJAB0715_00381 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJAB0715_00382 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJAB0715_00382 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BJAB0715_00382 PF13244 Domain of unknown function (DUF4040) BJAB0715_00382 PF00361 Proton-conducting membrane transporter BJAB0715_00385 PF01502 Phosphoribosyl-AMP cyclohydrolase BJAB0715_00386 PF01494 FAD binding domain BJAB0715_00387 PF03109 ABC1 family BJAB0715_00389 PF01209 ubiE/COQ5 methyltransferase family BJAB0715_00391 PF03976 Polyphosphate kinase 2 (PPK2) BJAB0715_00393 PF17946 RecC C-terminal domain BJAB0715_00394 PF12705 PD-(D/E)XK nuclease superfamily BJAB0715_00394 PF00580 UvrD/REP helicase N-terminal domain BJAB0715_00394 PF13361 UvrD-like helicase C-terminal domain BJAB0715_00395 PF13538 UvrD-like helicase C-terminal domain BJAB0715_00398 PF00312 Ribosomal protein S15 BJAB0715_00399 PF00575 S1 RNA binding domain BJAB0715_00399 PF03725 3' exoribonuclease family, domain 2 BJAB0715_00399 PF01138 3' exoribonuclease family, domain 1 BJAB0715_00399 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BJAB0715_00399 PF00013 KH domain BJAB0715_00400 PF01544 CorA-like Mg2+ transporter protein BJAB0715_00402 PF00226 DnaJ domain BJAB0715_00402 PF01556 DnaJ C terminal domain BJAB0715_00404 PF01430 Hsp33 protein BJAB0715_00405 PF00999 Sodium/hydrogen exchanger family BJAB0715_00405 PF02254 TrkA-N domain BJAB0715_00406 PF00270 DEAD/DEAH box helicase BJAB0715_00406 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJAB0715_00406 PF18074 Primosomal protein N C-terminal domain BJAB0715_00406 PF17764 3′ DNA-binding domain (3′BD) BJAB0715_00406 PF00271 Helicase conserved C-terminal domain BJAB0715_00407 PF00482 Type II secretion system (T2SS), protein F BJAB0715_00408 PF07963 Prokaryotic N-terminal methylation motif BJAB0715_00408 PF08334 Type II secretion system (T2SS), protein G BJAB0715_00410 PF01588 Putative tRNA binding domain BJAB0715_00411 PF00795 Carbon-nitrogen hydrolase BJAB0715_00412 PF03471 Transporter associated domain BJAB0715_00412 PF00571 CBS domain BJAB0715_00413 PF01206 Sulfurtransferase TusA BJAB0715_00417 PF01177 Asp/Glu/Hydantoin racemase BJAB0715_00419 PF00762 Ferrochelatase BJAB0715_00420 PF00753 Metallo-beta-lactamase superfamily BJAB0715_00421 PF03884 DNA gyrase inhibitor YacG BJAB0715_00425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BJAB0715_00427 PF01197 Ribosomal protein L31 BJAB0715_00428 PF03109 ABC1 family BJAB0715_00429 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_00429 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_00430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_00430 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_00430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_00431 PF01554 MatE BJAB0715_00433 PF04055 Radical SAM superfamily BJAB0715_00433 PF06969 HemN C-terminal domain BJAB0715_00434 PF00106 short chain dehydrogenase BJAB0715_00435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00435 PF03466 LysR substrate binding domain BJAB0715_00436 PF00501 AMP-binding enzyme BJAB0715_00436 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00437 PF12111 Polyribonucleotide phosphorylase C terminal BJAB0715_00437 PF00575 S1 RNA binding domain BJAB0715_00437 PF10150 Ribonuclease E/G family BJAB0715_00439 PF00849 RNA pseudouridylate synthase BJAB0715_00439 PF01479 S4 domain BJAB0715_00440 PF13419 Haloacid dehalogenase-like hydrolase BJAB0715_00441 PF13280 WYL domain BJAB0715_00441 PF08279 HTH domain BJAB0715_00442 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_00444 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00444 PF03466 LysR substrate binding domain BJAB0715_00445 PF12706 Beta-lactamase superfamily domain BJAB0715_00446 PF00141 Peroxidase BJAB0715_00447 PF02896 PEP-utilising enzyme, TIM barrel domain BJAB0715_00447 PF00391 PEP-utilising enzyme, mobile domain BJAB0715_00447 PF05524 PEP-utilising enzyme, N-terminal BJAB0715_00447 PF01590 GAF domain BJAB0715_00448 PF00293 NUDIX domain BJAB0715_00452 PF03466 LysR substrate binding domain BJAB0715_00452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00454 PF00330 Aconitase family (aconitate hydratase) BJAB0715_00455 PF00694 Aconitase C-terminal domain BJAB0715_00457 PF00180 Isocitrate/isopropylmalate dehydrogenase BJAB0715_00460 PF01176 Translation initiation factor 1A / IF-1 BJAB0715_00462 PF01416 tRNA pseudouridine synthase BJAB0715_00466 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJAB0715_00466 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJAB0715_00468 PF00375 Sodium:dicarboxylate symporter family BJAB0715_00470 PF03279 Bacterial lipid A biosynthesis acyltransferase BJAB0715_00471 PF01810 LysE type translocator BJAB0715_00474 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_00474 PF00107 Zinc-binding dehydrogenase BJAB0715_00475 PF01638 HxlR-like helix-turn-helix BJAB0715_00477 PF01131 DNA topoisomerase BJAB0715_00477 PF01751 Toprim domain BJAB0715_00477 PF08272 Topoisomerase I zinc-ribbon-like BJAB0715_00477 PF01396 Topoisomerase DNA binding C4 zinc finger BJAB0715_00480 PF00580 UvrD/REP helicase N-terminal domain BJAB0715_00480 PF13361 UvrD-like helicase C-terminal domain BJAB0715_00481 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BJAB0715_00485 PF02254 TrkA-N domain BJAB0715_00485 PF00999 Sodium/hydrogen exchanger family BJAB0715_00486 PF00471 Ribosomal protein L33 BJAB0715_00487 PF00830 Ribosomal L28 family BJAB0715_00488 PF00171 Aldehyde dehydrogenase family BJAB0715_00490 PF00551 Formyl transferase BJAB0715_00490 PF01842 ACT domain BJAB0715_00492 PF01618 MotA/TolQ/ExbB proton channel family BJAB0715_00494 PF01625 Peptide methionine sulfoxide reductase BJAB0715_00496 PF00186 Dihydrofolate reductase BJAB0715_00497 PF00303 Thymidylate synthase BJAB0715_00500 PF01790 Prolipoprotein diacylglyceryl transferase BJAB0715_00504 PF00902 Sec-independent protein translocase protein (TatC) BJAB0715_00505 PF02416 mttA/Hcf106 family BJAB0715_00506 PF02416 mttA/Hcf106 family BJAB0715_00508 PF01725 Ham1 family BJAB0715_00511 PF00561 alpha/beta hydrolase fold BJAB0715_00511 PF07021 Methionine biosynthesis protein MetW BJAB0715_00512 PF00561 alpha/beta hydrolase fold BJAB0715_00513 PF00682 HMGL-like BJAB0715_00513 PF08502 LeuA allosteric (dimerisation) domain BJAB0715_00514 PF18331 PKHD-type hydroxylase C-terminal domain BJAB0715_00514 PF13640 2OG-Fe(II) oxygenase superfamily BJAB0715_00515 PF00593 TonB dependent receptor BJAB0715_00515 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_00516 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_00516 PF05698 Bacterial trigger factor protein (TF) C-terminus BJAB0715_00516 PF05697 Bacterial trigger factor protein (TF) BJAB0715_00517 PF00574 Clp protease BJAB0715_00518 PF06689 ClpX C4-type zinc finger BJAB0715_00518 PF10431 C-terminal, D2-small domain, of ClpB protein BJAB0715_00518 PF07724 AAA domain (Cdc48 subfamily) BJAB0715_00521 PF05681 Fumarate hydratase (Fumerase) BJAB0715_00521 PF05683 Fumarase C-terminus BJAB0715_00522 PF01515 Phosphate acetyl/butaryl transferase BJAB0715_00522 PF07085 DRTGG domain BJAB0715_00523 PF00871 Acetokinase family BJAB0715_00524 PF00920 Dehydratase family BJAB0715_00525 PF01081 KDPG and KHG aldolase BJAB0715_00526 PF02447 GntP family permease BJAB0715_00527 PF01202 Shikimate kinase BJAB0715_00528 PF00171 Aldehyde dehydrogenase family BJAB0715_00529 PF00171 Aldehyde dehydrogenase family BJAB0715_00531 PF00561 alpha/beta hydrolase fold BJAB0715_00533 PF00933 Glycosyl hydrolase family 3 N terminal domain BJAB0715_00534 PF11818 C-terminal domain of tail specific protease (DUF3340) BJAB0715_00534 PF00595 PDZ domain BJAB0715_00534 PF03572 Peptidase family S41 BJAB0715_00534 PF17804 Tail specific protease N-terminal domain BJAB0715_00535 PF00534 Glycosyl transferases group 1 BJAB0715_00535 PF13439 Glycosyltransferase Family 4 BJAB0715_00536 PF01569 PAP2 superfamily BJAB0715_00537 PF04384 Iron-sulphur cluster assembly BJAB0715_00538 PF00334 Nucleoside diphosphate kinase BJAB0715_00539 PF04055 Radical SAM superfamily BJAB0715_00541 PF13464 Domain of unknown function (DUF4115) BJAB0715_00542 PF04551 GcpE protein BJAB0715_00543 PF13393 Histidyl-tRNA synthetase BJAB0715_00543 PF03129 Anticodon binding domain BJAB0715_00545 PF13360 PQQ-like domain BJAB0715_00546 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BJAB0715_00546 PF01926 50S ribosome-binding GTPase BJAB0715_00548 PF02556 Preprotein translocase subunit SecB BJAB0715_00549 PF00462 Glutaredoxin BJAB0715_00551 PF03193 RsgA GTPase BJAB0715_00552 PF00929 Exonuclease BJAB0715_00555 PF02321 Outer membrane efflux protein BJAB0715_00556 PF00005 ABC transporter BJAB0715_00556 PF02687 FtsX-like permease family BJAB0715_00556 PF12704 MacB-like periplasmic core domain BJAB0715_00557 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_00560 PF09334 tRNA synthetases class I (M) BJAB0715_00560 PF13603 Leucyl-tRNA synthetase, Domain 2 BJAB0715_00560 PF00133 tRNA synthetases class I (I, L, M and V) BJAB0715_00560 PF08264 Anticodon-binding domain of tRNA BJAB0715_00562 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJAB0715_00562 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJAB0715_00562 PF00205 Thiamine pyrophosphate enzyme, central domain BJAB0715_00563 PF10369 Small subunit of acetolactate synthase BJAB0715_00564 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BJAB0715_00564 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BJAB0715_00566 PF00563 EAL domain BJAB0715_00566 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_00566 PF03707 Bacterial signalling protein N terminal repeat BJAB0715_00583 PF07693 KAP family P-loop domain BJAB0715_00586 PF01026 TatD related DNase BJAB0715_00590 PF10544 T5orf172 domain BJAB0715_00592 PF13784 Fic/DOC family N-terminal BJAB0715_00592 PF02661 Fic/DOC family BJAB0715_00595 PF12102 Domain of unknown function (DUF3578) BJAB0715_00595 PF07728 AAA domain (dynein-related subfamily) BJAB0715_00597 PF00009 Elongation factor Tu GTP binding domain BJAB0715_00597 PF16658 Class II release factor RF3, C-terminal domain BJAB0715_00597 PF03144 Elongation factor Tu domain 2 BJAB0715_00600 PF01026 TatD related DNase BJAB0715_00601 PF00330 Aconitase family (aconitate hydratase) BJAB0715_00601 PF00694 Aconitase C-terminal domain BJAB0715_00602 PF00899 ThiF family BJAB0715_00604 PF03466 LysR substrate binding domain BJAB0715_00604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00606 PF01207 Dihydrouridine synthase (Dus) BJAB0715_00607 PF07690 Major Facilitator Superfamily BJAB0715_00609 PF00892 EamA-like transporter family BJAB0715_00610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BJAB0715_00610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BJAB0715_00611 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJAB0715_00612 PF02233 NAD(P) transhydrogenase beta subunit BJAB0715_00613 PF00106 short chain dehydrogenase BJAB0715_00615 PF01261 Xylose isomerase-like TIM barrel BJAB0715_00616 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJAB0715_00616 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJAB0715_00617 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_00618 PF00072 Response regulator receiver domain BJAB0715_00618 PF01627 Hpt domain BJAB0715_00618 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_00618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00618 PF00672 HAMP domain BJAB0715_00618 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJAB0715_00619 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_00621 PF05958 tRNA (Uracil-5-)-methyltransferase BJAB0715_00622 PF02824 TGS domain BJAB0715_00622 PF04607 Region found in RelA / SpoT proteins BJAB0715_00622 PF13291 ACT domain BJAB0715_00624 PF03819 MazG nucleotide pyrophosphohydrolase domain BJAB0715_00626 PF12627 Probable RNA and SrmB- binding site of polymerase A BJAB0715_00626 PF12626 Polymerase A arginine-rich C-terminus BJAB0715_00626 PF01743 Poly A polymerase head domain BJAB0715_00627 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJAB0715_00628 PF02548 Ketopantoate hydroxymethyltransferase BJAB0715_00629 PF02569 Pantoate-beta-alanine ligase BJAB0715_00630 PF03668 P-loop ATPase protein family BJAB0715_00631 PF00381 PTS HPr component phosphorylation site BJAB0715_00632 PF04751 Protein of unknown function (DUF615) BJAB0715_00633 PF00501 AMP-binding enzyme BJAB0715_00633 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_00634 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJAB0715_00634 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJAB0715_00634 PF03129 Anticodon binding domain BJAB0715_00634 PF02824 TGS domain BJAB0715_00635 PF00707 Translation initiation factor IF-3, C-terminal domain BJAB0715_00635 PF05198 Translation initiation factor IF-3, N-terminal domain BJAB0715_00636 PF00043 Glutathione S-transferase, C-terminal domain BJAB0715_00636 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_00637 PF09335 SNARE associated Golgi protein BJAB0715_00638 PF07690 Major Facilitator Superfamily BJAB0715_00639 PF01632 Ribosomal protein L35 BJAB0715_00640 PF00453 Ribosomal protein L20 BJAB0715_00644 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BJAB0715_00644 PF01409 tRNA synthetases class II core domain (F) BJAB0715_00645 PF03484 tRNA synthetase B5 domain BJAB0715_00645 PF01588 Putative tRNA binding domain BJAB0715_00645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BJAB0715_00645 PF03483 B3/4 domain BJAB0715_00645 PF03147 Ferredoxin-fold anticodon binding domain BJAB0715_00646 PF00216 Bacterial DNA-binding protein BJAB0715_00649 PF07497 Rho termination factor, RNA-binding domain BJAB0715_00649 PF07498 Rho termination factor, N-terminal domain BJAB0715_00649 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJAB0715_00650 PF00085 Thioredoxin BJAB0715_00651 PF02541 Ppx/GppA phosphatase family BJAB0715_00652 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BJAB0715_00653 PF09179 TilS substrate binding domain BJAB0715_00653 PF11734 TilS substrate C-terminal domain BJAB0715_00653 PF01171 PP-loop family BJAB0715_00654 PF03807 NADP oxidoreductase coenzyme F420-dependent BJAB0715_00654 PF14748 Pyrroline-5-carboxylate reductase dimerisation BJAB0715_00655 PF02325 YGGT family BJAB0715_00656 PF01367 5'-3' exonuclease, C-terminal SAM fold BJAB0715_00656 PF01612 3'-5' exonuclease BJAB0715_00656 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJAB0715_00656 PF00476 DNA polymerase family A BJAB0715_00660 PF00437 Type II/IV secretion system protein BJAB0715_00661 PF02566 OsmC-like protein BJAB0715_00662 PF01047 MarR family BJAB0715_00664 PF00795 Carbon-nitrogen hydrolase BJAB0715_00670 PF04552 Sigma-54, DNA binding domain BJAB0715_00670 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJAB0715_00670 PF04963 Sigma-54 factor, core binding domain BJAB0715_00671 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BJAB0715_00672 PF01722 BolA-like protein BJAB0715_00673 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJAB0715_00674 PF01634 ATP phosphoribosyltransferase BJAB0715_00675 PF00815 Histidinol dehydrogenase BJAB0715_00676 PF00155 Aminotransferase class I and II BJAB0715_00677 PF00425 chorismate binding enzyme BJAB0715_00677 PF04715 Anthranilate synthase component I, N terminal region BJAB0715_00680 PF13936 Helix-turn-helix domain BJAB0715_00680 PF00665 Integrase core domain BJAB0715_00687 PF00293 NUDIX domain BJAB0715_00688 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_00689 PF00814 Glycoprotease family BJAB0715_00690 PF04445 Putative SAM-dependent methyltransferase BJAB0715_00692 PF00756 Putative esterase BJAB0715_00694 PF00834 Ribulose-phosphate 3 epimerase family BJAB0715_00697 PF07732 Multicopper oxidase BJAB0715_00697 PF07731 Multicopper oxidase BJAB0715_00697 PF00394 Multicopper oxidase BJAB0715_00698 PF05275 Copper resistance protein B precursor (CopB) BJAB0715_00700 PF00893 Small Multidrug Resistance protein BJAB0715_00701 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJAB0715_00701 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BJAB0715_00702 PF01960 ArgJ family BJAB0715_00703 PF02445 Quinolinate synthetase A protein BJAB0715_00704 PF00962 Adenosine/AMP deaminase BJAB0715_00705 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_00705 PF00107 Zinc-binding dehydrogenase BJAB0715_00706 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00706 PF03466 LysR substrate binding domain BJAB0715_00707 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_00707 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_00707 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_00708 PF07690 Major Facilitator Superfamily BJAB0715_00709 PF02515 CoA-transferase family III BJAB0715_00711 PF14537 Cytochrome c3 BJAB0715_00711 PF00890 FAD binding domain BJAB0715_00712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00712 PF03466 LysR substrate binding domain BJAB0715_00714 PF07690 Major Facilitator Superfamily BJAB0715_00715 PF03466 LysR substrate binding domain BJAB0715_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00717 PF07687 Peptidase dimerisation domain BJAB0715_00717 PF01546 Peptidase family M20/M25/M40 BJAB0715_00718 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJAB0715_00718 PF12833 Helix-turn-helix domain BJAB0715_00720 PF01810 LysE type translocator BJAB0715_00721 PF03466 LysR substrate binding domain BJAB0715_00721 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00723 PF08267 Cobalamin-independent synthase, N-terminal domain BJAB0715_00723 PF01717 Cobalamin-independent synthase, Catalytic domain BJAB0715_00724 PF01613 Flavin reductase like domain BJAB0715_00728 PF17074 Darcynin, domain of unknown function BJAB0715_00732 PF02567 Phenazine biosynthesis-like protein BJAB0715_00736 PF00268 Ribonucleotide reductase, small chain BJAB0715_00738 PF02867 Ribonucleotide reductase, barrel domain BJAB0715_00738 PF03477 ATP cone domain BJAB0715_00738 PF00317 Ribonucleotide reductase, all-alpha domain BJAB0715_00739 PF00072 Response regulator receiver domain BJAB0715_00739 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_00740 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_00740 PF00672 HAMP domain BJAB0715_00742 PF17151 Periplasmic sensor domain BJAB0715_00742 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_00743 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BJAB0715_00744 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BJAB0715_00745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BJAB0715_00745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BJAB0715_00747 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BJAB0715_00747 PF10531 SLBB domain BJAB0715_00747 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BJAB0715_00748 PF00384 Molybdopterin oxidoreductase BJAB0715_00748 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJAB0715_00748 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJAB0715_00749 PF00146 NADH dehydrogenase BJAB0715_00750 PF12838 4Fe-4S dicluster domain BJAB0715_00751 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BJAB0715_00752 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJAB0715_00753 PF00361 Proton-conducting membrane transporter BJAB0715_00753 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJAB0715_00754 PF00361 Proton-conducting membrane transporter BJAB0715_00755 PF00361 Proton-conducting membrane transporter BJAB0715_00757 PF00313 'Cold-shock' DNA-binding domain BJAB0715_00758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00758 PF03466 LysR substrate binding domain BJAB0715_00759 PF00175 Oxidoreductase NAD-binding domain BJAB0715_00759 PF00970 Oxidoreductase FAD-binding domain BJAB0715_00762 PF05552 Conserved TM helix BJAB0715_00765 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_00766 PF13533 Biotin-lipoyl like BJAB0715_00771 PF09334 tRNA synthetases class I (M) BJAB0715_00771 PF01588 Putative tRNA binding domain BJAB0715_00773 PF10609 NUBPL iron-transfer P-loop NTPase BJAB0715_00774 PF01048 Phosphorylase superfamily BJAB0715_00777 PF00692 dUTPase BJAB0715_00783 PF01207 Dihydrouridine synthase (Dus) BJAB0715_00785 PF00448 SRP54-type protein, GTPase domain BJAB0715_00785 PF02978 Signal peptide binding domain BJAB0715_00785 PF02881 SRP54-type protein, helical bundle domain BJAB0715_00786 PF03309 Type III pantothenate kinase BJAB0715_00788 PF01925 Sulfite exporter TauE/SafE BJAB0715_00790 PF02463 RecF/RecN/SMC N terminal domain BJAB0715_00790 PF06470 SMC proteins Flexible Hinge Domain BJAB0715_00792 PF12826 Helix-hairpin-helix motif BJAB0715_00792 PF00533 BRCA1 C Terminus (BRCT) domain BJAB0715_00792 PF01653 NAD-dependent DNA ligase adenylation domain BJAB0715_00792 PF03120 NAD-dependent DNA ligase OB-fold domain BJAB0715_00792 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BJAB0715_00793 PF00210 Ferritin-like domain BJAB0715_00794 PF07690 Major Facilitator Superfamily BJAB0715_00795 PF00982 Glycosyltransferase family 20 BJAB0715_00796 PF02358 Trehalose-phosphatase BJAB0715_00797 PF08241 Methyltransferase domain BJAB0715_00797 PF12697 Alpha/beta hydrolase family BJAB0715_00798 PF00202 Aminotransferase class-III BJAB0715_00798 PF06968 Biotin and Thiamin Synthesis associated domain BJAB0715_00798 PF04055 Radical SAM superfamily BJAB0715_00799 PF00155 Aminotransferase class I and II BJAB0715_00802 PF00849 RNA pseudouridylate synthase BJAB0715_00802 PF01479 S4 domain BJAB0715_00803 PF04079 Segregation and condensation complex subunit ScpB BJAB0715_00804 PF02616 Segregation and condensation protein ScpA BJAB0715_00805 PF01300 Telomere recombination BJAB0715_00806 PF04315 Elongation factor P hydroxylase BJAB0715_00807 PF02620 Large ribosomal RNA subunit accumulation protein YceD BJAB0715_00808 PF01783 Ribosomal L32p protein family BJAB0715_00809 PF00698 Acyl transferase domain BJAB0715_00811 PF00550 Phosphopantetheine attachment site BJAB0715_00812 PF01476 LysM domain BJAB0715_00812 PF04972 BON domain BJAB0715_00813 PF08543 Phosphomethylpyrimidine kinase BJAB0715_00813 PF03070 TENA/THI-4/PQQC family BJAB0715_00813 PF02581 Thiamine monophosphate synthase BJAB0715_00815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJAB0715_00818 PF02261 Aspartate decarboxylase BJAB0715_00819 PF01195 Peptidyl-tRNA hydrolase BJAB0715_00820 PF01386 Ribosomal L25p family BJAB0715_00821 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BJAB0715_00821 PF14572 Phosphoribosyl synthetase-associated domain BJAB0715_00823 PF08544 GHMP kinases C terminal BJAB0715_00823 PF00288 GHMP kinases N terminal domain BJAB0715_00824 PF03550 Outer membrane lipoprotein LolB BJAB0715_00826 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BJAB0715_00826 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BJAB0715_00826 PF01488 Shikimate / quinate 5-dehydrogenase BJAB0715_00827 PF08278 DNA primase DnaG DnaB-binding BJAB0715_00827 PF01807 CHC2 zinc finger BJAB0715_00827 PF10410 DnaB-helicase binding domain of primase BJAB0715_00827 PF08275 DNA primase catalytic core, N-terminal domain BJAB0715_00828 PF13525 Outer membrane lipoprotein BJAB0715_00829 PF01479 S4 domain BJAB0715_00829 PF00849 RNA pseudouridylate synthase BJAB0715_00832 PF01668 SmpB protein BJAB0715_00833 PF01467 Cytidylyltransferase-like BJAB0715_00834 PF00037 4Fe-4S binding domain BJAB0715_00837 PF03466 LysR substrate binding domain BJAB0715_00837 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_00838 PF00180 Isocitrate/isopropylmalate dehydrogenase BJAB0715_00839 PF02028 BCCT, betaine/carnitine/choline family transporter BJAB0715_00840 PF07859 alpha/beta hydrolase fold BJAB0715_00841 PF00355 Rieske [2Fe-2S] domain BJAB0715_00841 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BJAB0715_00842 PF00171 Aldehyde dehydrogenase family BJAB0715_00843 PF00970 Oxidoreductase FAD-binding domain BJAB0715_00843 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_00843 PF00175 Oxidoreductase NAD-binding domain BJAB0715_00844 PF00175 Oxidoreductase NAD-binding domain BJAB0715_00844 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_00844 PF00970 Oxidoreductase FAD-binding domain BJAB0715_00846 PF02540 NAD synthase BJAB0715_00846 PF00795 Carbon-nitrogen hydrolase BJAB0715_00848 PF05726 Pirin C-terminal cupin domain BJAB0715_00848 PF02678 Pirin BJAB0715_00850 PF00109 Beta-ketoacyl synthase, N-terminal domain BJAB0715_00850 PF02801 Beta-ketoacyl synthase, C-terminal domain BJAB0715_00852 PF00164 Ribosomal protein S12/S23 BJAB0715_00853 PF00177 Ribosomal protein S7p/S5e BJAB0715_00854 PF00679 Elongation factor G C-terminus BJAB0715_00854 PF03144 Elongation factor Tu domain 2 BJAB0715_00854 PF14492 Elongation Factor G, domain II BJAB0715_00854 PF00009 Elongation factor Tu GTP binding domain BJAB0715_00854 PF03764 Elongation factor G, domain IV BJAB0715_00855 PF03144 Elongation factor Tu domain 2 BJAB0715_00855 PF03143 Elongation factor Tu C-terminal domain BJAB0715_00855 PF00009 Elongation factor Tu GTP binding domain BJAB0715_00858 PF00583 Acetyltransferase (GNAT) family BJAB0715_00859 PF04377 Arginine-tRNA-protein transferase, C terminus BJAB0715_00859 PF04376 Arginine-tRNA-protein transferase, N terminus BJAB0715_00860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BJAB0715_00861 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_00862 PF17854 FtsK alpha domain BJAB0715_00862 PF09397 Ftsk gamma domain BJAB0715_00862 PF01580 FtsK/SpoIIIE family BJAB0715_00862 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BJAB0715_00863 PF01810 LysE type translocator BJAB0715_00865 PF03776 Septum formation topological specificity factor MinE BJAB0715_00866 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJAB0715_00867 PF03775 Septum formation inhibitor MinC, C-terminal domain BJAB0715_00869 PF01553 Acyltransferase BJAB0715_00870 PF00691 OmpA family BJAB0715_00870 PF13488 Glycine zipper BJAB0715_00871 PF00580 UvrD/REP helicase N-terminal domain BJAB0715_00871 PF13361 UvrD-like helicase C-terminal domain BJAB0715_00872 PF00692 dUTPase BJAB0715_00873 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJAB0715_00873 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJAB0715_00873 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJAB0715_00873 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJAB0715_00874 PF00696 Amino acid kinase family BJAB0715_00876 PF13230 Glutamine amidotransferases class-II BJAB0715_00877 PF01814 Hemerythrin HHE cation binding domain BJAB0715_00879 PF03658 RnfH family Ubiquitin BJAB0715_00880 PF04355 SmpA / OmlA family BJAB0715_00881 PF01475 Ferric uptake regulator family BJAB0715_00882 PF00437 Type II/IV secretion system protein BJAB0715_00883 PF00437 Type II/IV secretion system protein BJAB0715_00884 PF01168 Alanine racemase, N-terminal domain BJAB0715_00886 PF12320 Type 5 capsule protein repressor C-terminal domain BJAB0715_00886 PF00149 Calcineurin-like phosphoesterase BJAB0715_00890 PF08338 Domain of unknown function (DUF1731) BJAB0715_00890 PF01370 NAD dependent epimerase/dehydratase family BJAB0715_00891 PF01266 FAD dependent oxidoreductase BJAB0715_00892 PF00490 Delta-aminolevulinic acid dehydratase BJAB0715_00893 PF03061 Thioesterase superfamily BJAB0715_00894 PF13533 Biotin-lipoyl like BJAB0715_00895 PF07690 Major Facilitator Superfamily BJAB0715_00909 PF00929 Exonuclease BJAB0715_00916 PF01381 Helix-turn-helix BJAB0715_00916 PF00717 Peptidase S24-like BJAB0715_00925 PF00145 C-5 cytosine-specific DNA methylase BJAB0715_00927 PF01695 IstB-like ATP binding protein BJAB0715_00936 PF07007 Lysozyme inhibitor LprI BJAB0715_00972 PF00712 DNA polymerase III beta subunit, N-terminal domain BJAB0715_00972 PF02767 DNA polymerase III beta subunit, central domain BJAB0715_00972 PF02768 DNA polymerase III beta subunit, C-terminal domain BJAB0715_00989 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_00993 PF13614 AAA domain BJAB0715_00994 PF10544 T5orf172 domain BJAB0715_01002 PF13356 Arm DNA-binding domain BJAB0715_01002 PF00589 Phage integrase family BJAB0715_01012 PF00436 Single-strand binding protein family BJAB0715_01013 PF01638 HxlR-like helix-turn-helix BJAB0715_01014 PF07690 Major Facilitator Superfamily BJAB0715_01015 PF00155 Aminotransferase class I and II BJAB0715_01018 PF13537 Glutamine amidotransferase domain BJAB0715_01018 PF00733 Asparagine synthase BJAB0715_01022 PF00083 Sugar (and other) transporter BJAB0715_01023 PF00701 Dihydrodipicolinate synthetase family BJAB0715_01025 PF04542 Sigma-70 region 2 BJAB0715_01025 PF08281 Sigma-70, region 4 BJAB0715_01027 PF00593 TonB dependent receptor BJAB0715_01027 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01031 PF01126 Heme oxygenase BJAB0715_01036 PF13520 Amino acid permease BJAB0715_01037 PF02574 Homocysteine S-methyltransferase BJAB0715_01039 PF06039 Malate:quinone oxidoreductase (Mqo) BJAB0715_01040 PF05199 GMC oxidoreductase BJAB0715_01040 PF00732 GMC oxidoreductase BJAB0715_01041 PF00171 Aldehyde dehydrogenase family BJAB0715_01042 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_01042 PF13977 BetI-type transcriptional repressor, C-terminal BJAB0715_01043 PF02028 BCCT, betaine/carnitine/choline family transporter BJAB0715_01044 PF02028 BCCT, betaine/carnitine/choline family transporter BJAB0715_01046 PF03061 Thioesterase superfamily BJAB0715_01048 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJAB0715_01048 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJAB0715_01049 PF00375 Sodium:dicarboxylate symporter family BJAB0715_01050 PF07152 YaeQ protein BJAB0715_01051 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_01052 PF01522 Polysaccharide deacetylase BJAB0715_01052 PF14883 Hypothetical glycosyl hydrolase family 13 BJAB0715_01053 PF00535 Glycosyl transferase family 2 BJAB0715_01055 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01058 PF01614 Bacterial transcriptional regulator BJAB0715_01058 PF09339 IclR helix-turn-helix domain BJAB0715_01059 PF00355 Rieske [2Fe-2S] domain BJAB0715_01061 PF00355 Rieske [2Fe-2S] domain BJAB0715_01063 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJAB0715_01064 PF14759 Reductase C-terminal BJAB0715_01064 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01065 PF07690 Major Facilitator Superfamily BJAB0715_01067 PF12697 Alpha/beta hydrolase family BJAB0715_01069 PF03447 Homoserine dehydrogenase, NAD binding domain BJAB0715_01069 PF01958 Domain of unknown function DUF108 BJAB0715_01070 PF00171 Aldehyde dehydrogenase family BJAB0715_01071 PF00205 Thiamine pyrophosphate enzyme, central domain BJAB0715_01071 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJAB0715_01071 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJAB0715_01073 PF07690 Major Facilitator Superfamily BJAB0715_01075 PF01327 Polypeptide deformylase BJAB0715_01076 PF04960 Glutaminase BJAB0715_01077 PF12833 Helix-turn-helix domain BJAB0715_01077 PF02311 AraC-like ligand binding domain BJAB0715_01078 PF07690 Major Facilitator Superfamily BJAB0715_01079 PF01263 Aldose 1-epimerase BJAB0715_01082 PF00809 Pterin binding enzyme BJAB0715_01082 PF02574 Homocysteine S-methyltransferase BJAB0715_01082 PF02965 Vitamin B12 dependent methionine synthase, activation domain BJAB0715_01082 PF02607 B12 binding domain BJAB0715_01082 PF02310 B12 binding domain BJAB0715_01084 PF01384 Phosphate transporter family BJAB0715_01085 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_01088 PF03781 Sulfatase-modifying factor enzyme 1 BJAB0715_01089 PF00884 Sulfatase BJAB0715_01092 PF01106 NifU-like domain BJAB0715_01092 PF01521 Iron-sulphur cluster biosynthesis BJAB0715_01093 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01093 PF00593 TonB dependent receptor BJAB0715_01095 PF00561 alpha/beta hydrolase fold BJAB0715_01096 PF00484 Carbonic anhydrase BJAB0715_01097 PF13472 GDSL-like Lipase/Acylhydrolase family BJAB0715_01098 PF00005 ABC transporter BJAB0715_01100 PF01694 Rhomboid family BJAB0715_01101 PF00912 Transglycosylase BJAB0715_01102 PF02503 Polyphosphate kinase middle domain BJAB0715_01102 PF13090 Polyphosphate kinase C-terminal domain 2 BJAB0715_01102 PF17941 Polyphosphate kinase C-terminal domain 1 BJAB0715_01102 PF13089 Polyphosphate kinase N-terminal domain BJAB0715_01104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01104 PF03466 LysR substrate binding domain BJAB0715_01105 PF00561 alpha/beta hydrolase fold BJAB0715_01106 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01106 PF18113 Rubredoxin binding C-terminal domain BJAB0715_01107 PF00301 Rubredoxin BJAB0715_01108 PF00665 Integrase core domain BJAB0715_01108 PF13936 Helix-turn-helix domain BJAB0715_01111 PF00152 tRNA synthetases class II (D, K and N) BJAB0715_01111 PF01336 OB-fold nucleic acid binding domain BJAB0715_01112 PF14052 Capsule assembly protein Wzi BJAB0715_01114 PF01507 Phosphoadenosine phosphosulfate reductase family BJAB0715_01115 PF00009 Elongation factor Tu GTP binding domain BJAB0715_01118 PF03600 Citrate transporter BJAB0715_01119 PF00571 CBS domain BJAB0715_01119 PF03471 Transporter associated domain BJAB0715_01119 PF01595 Cyclin M transmembrane N-terminal domain BJAB0715_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01120 PF03466 LysR substrate binding domain BJAB0715_01121 PF00463 Isocitrate lyase family BJAB0715_01125 PF01774 UreD urease accessory protein BJAB0715_01126 PF00547 Urease, gamma subunit BJAB0715_01127 PF00699 Urease beta subunit BJAB0715_01128 PF00449 Urease alpha-subunit, N-terminal domain BJAB0715_01128 PF01979 Amidohydrolase family BJAB0715_01129 PF05194 UreE urease accessory protein, C-terminal domain BJAB0715_01129 PF02814 UreE urease accessory protein, N-terminal domain BJAB0715_01130 PF01730 UreF BJAB0715_01131 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJAB0715_01134 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_01134 PF03717 Penicillin-binding Protein dimerisation domain BJAB0715_01137 PF05191 Adenylate kinase, active site lid BJAB0715_01138 PF00730 HhH-GPD superfamily base excision DNA repair protein BJAB0715_01138 PF10576 Iron-sulfur binding domain of endonuclease III BJAB0715_01138 PF00633 Helix-hairpin-helix motif BJAB0715_01139 PF04060 Putative Fe-S cluster BJAB0715_01140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJAB0715_01140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BJAB0715_01142 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJAB0715_01143 PF02590 Predicted SPOUT methyltransferase BJAB0715_01144 PF05362 Lon protease (S16) C-terminal proteolytic domain BJAB0715_01144 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_01144 PF02190 ATP-dependent protease La (LON) substrate-binding domain BJAB0715_01147 PF01812 5-formyltetrahydrofolate cyclo-ligase family BJAB0715_01208 PF01551 Peptidase family M23 BJAB0715_01208 PF08525 Opacity-associated protein A N-terminal motif BJAB0715_01208 PF01476 LysM domain BJAB0715_01217 PF08019 Phosphoethanolamine transferase EptA/EptB BJAB0715_01217 PF00884 Sulfatase BJAB0715_01223 PF00557 Metallopeptidase family M24 BJAB0715_01223 PF05195 Aminopeptidase P, N-terminal domain BJAB0715_01224 PF01494 FAD binding domain BJAB0715_01225 PF01494 FAD binding domain BJAB0715_01228 PF13411 MerR HTH family regulatory protein BJAB0715_01230 PF01810 LysE type translocator BJAB0715_01231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01231 PF03466 LysR substrate binding domain BJAB0715_01233 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJAB0715_01235 PF02021 Uncharacterised protein family UPF0102 BJAB0715_01236 PF04972 BON domain BJAB0715_01238 PF09297 NADH pyrophosphatase zinc ribbon domain BJAB0715_01238 PF00293 NUDIX domain BJAB0715_01240 PF00929 Exonuclease BJAB0715_01241 PF01464 Transglycosylase SLT domain BJAB0715_01241 PF01476 LysM domain BJAB0715_01242 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJAB0715_01243 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01244 PF12911 N-terminal TM domain of oligopeptide transport permease C BJAB0715_01244 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01245 PF00005 ABC transporter BJAB0715_01245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJAB0715_01246 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01246 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_01247 PF00593 TonB dependent receptor BJAB0715_01247 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01248 PF00929 Exonuclease BJAB0715_01249 PF01979 Amidohydrolase family BJAB0715_01250 PF00563 EAL domain BJAB0715_01250 PF00360 Phytochrome region BJAB0715_01250 PF01590 GAF domain BJAB0715_01250 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_01251 PF00764 Arginosuccinate synthase BJAB0715_01252 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01252 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_01254 PF05987 Bacterial protein of unknown function (DUF898) BJAB0715_01255 PF03180 NLPA lipoprotein BJAB0715_01260 PF03783 Curli production assembly/transport component CsgG BJAB0715_01262 PF05643 Putative bacterial lipoprotein (DUF799) BJAB0715_01264 PF00324 Amino acid permease BJAB0715_01265 PF01266 FAD dependent oxidoreductase BJAB0715_01266 PF00324 Amino acid permease BJAB0715_01268 PF07729 FCD domain BJAB0715_01268 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01270 PF00171 Aldehyde dehydrogenase family BJAB0715_01272 PF00202 Aminotransferase class-III BJAB0715_01273 PF04958 Arginine N-succinyltransferase beta subunit BJAB0715_01274 PF00324 Amino acid permease BJAB0715_01275 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BJAB0715_01275 PF17287 POTRA domain BJAB0715_01275 PF08479 POTRA domain, ShlB-type BJAB0715_01276 PF05860 haemagglutination activity domain BJAB0715_01276 PF13332 Hemagglutinin repeat BJAB0715_01276 PF13018 Extended Signal Peptide of Type V secretion system BJAB0715_01276 PF04829 Pre-toxin domain with VENN motif BJAB0715_01284 PF00171 Aldehyde dehydrogenase family BJAB0715_01285 PF00171 Aldehyde dehydrogenase family BJAB0715_01286 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJAB0715_01286 PF12833 Helix-turn-helix domain BJAB0715_01287 PF00892 EamA-like transporter family BJAB0715_01288 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BJAB0715_01288 PF08666 SAF domain BJAB0715_01289 PF07690 Major Facilitator Superfamily BJAB0715_01290 PF13378 Enolase C-terminal domain-like BJAB0715_01291 PF00701 Dihydrodipicolinate synthetase family BJAB0715_01292 PF00171 Aldehyde dehydrogenase family BJAB0715_01293 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01293 PF07729 FCD domain BJAB0715_01294 PF07519 Tannase and feruloyl esterase BJAB0715_01297 PF03573 outer membrane porin, OprD family BJAB0715_01298 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01298 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01298 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01300 PF00171 Aldehyde dehydrogenase family BJAB0715_01301 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01302 PF07690 Major Facilitator Superfamily BJAB0715_01305 PF00175 Oxidoreductase NAD-binding domain BJAB0715_01305 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_01306 PF00355 Rieske [2Fe-2S] domain BJAB0715_01308 PF03781 Sulfatase-modifying factor enzyme 1 BJAB0715_01309 PF00884 Sulfatase BJAB0715_01310 PF07690 Major Facilitator Superfamily BJAB0715_01311 PF03573 outer membrane porin, OprD family BJAB0715_01312 PF05199 GMC oxidoreductase BJAB0715_01313 PF07859 alpha/beta hydrolase fold BJAB0715_01314 PF00106 short chain dehydrogenase BJAB0715_01315 PF00743 Flavin-binding monooxygenase-like BJAB0715_01316 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJAB0715_01316 PF12833 Helix-turn-helix domain BJAB0715_01317 PF04072 Leucine carboxyl methyltransferase BJAB0715_01318 PF00743 Flavin-binding monooxygenase-like BJAB0715_01319 PF00106 short chain dehydrogenase BJAB0715_01321 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_01321 PF17932 Tetracyclin repressor-like, C-terminal domain BJAB0715_01322 PF02678 Pirin BJAB0715_01322 PF17954 Quercetinase C-terminal cupin domain BJAB0715_01325 PF00106 short chain dehydrogenase BJAB0715_01326 PF00743 Flavin-binding monooxygenase-like BJAB0715_01328 PF00860 Permease family BJAB0715_01329 PF00962 Adenosine/AMP deaminase BJAB0715_01330 PF01292 Prokaryotic cytochrome b561 BJAB0715_01332 PF01351 Ribonuclease HII BJAB0715_01333 PF02599 Global regulator protein family BJAB0715_01334 PF01842 ACT domain BJAB0715_01334 PF00696 Amino acid kinase family BJAB0715_01334 PF13840 ACT domain BJAB0715_01335 PF02272 DHHA1 domain BJAB0715_01335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJAB0715_01335 PF01411 tRNA synthetases class II (A) BJAB0715_01336 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJAB0715_01336 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJAB0715_01338 PF13393 Histidyl-tRNA synthetase BJAB0715_01339 PF00709 Adenylosuccinate synthetase BJAB0715_01342 PF00248 Aldo/keto reductase family BJAB0715_01343 PF13545 Crp-like helix-turn-helix domain BJAB0715_01343 PF00027 Cyclic nucleotide-binding domain BJAB0715_01344 PF02566 OsmC-like protein BJAB0715_01347 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_01347 PF02861 Clp amino terminal domain, pathogenicity island component BJAB0715_01347 PF07724 AAA domain (Cdc48 subfamily) BJAB0715_01347 PF10431 C-terminal, D2-small domain, of ClpB protein BJAB0715_01347 PF17871 AAA lid domain BJAB0715_01350 PF02926 THUMP domain BJAB0715_01350 PF10672 S-adenosylmethionine-dependent methyltransferase BJAB0715_01350 PF01170 Putative RNA methylase family UPF0020 BJAB0715_01352 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJAB0715_01352 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJAB0715_01353 PF01979 Amidohydrolase family BJAB0715_01354 PF13488 Glycine zipper BJAB0715_01354 PF00691 OmpA family BJAB0715_01356 PF00043 Glutathione S-transferase, C-terminal domain BJAB0715_01356 PF13417 Glutathione S-transferase, N-terminal domain BJAB0715_01357 PF02390 Putative methyltransferase BJAB0715_01359 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_01359 PF00043 Glutathione S-transferase, C-terminal domain BJAB0715_01361 PF13192 Thioredoxin domain BJAB0715_01361 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01365 PF00578 AhpC/TSA family BJAB0715_01365 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJAB0715_01366 PF00270 DEAD/DEAH box helicase BJAB0715_01366 PF11898 Domain of unknown function (DUF3418) BJAB0715_01366 PF04408 Helicase associated domain (HA2) BJAB0715_01366 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BJAB0715_01366 PF00271 Helicase conserved C-terminal domain BJAB0715_01367 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJAB0715_01367 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJAB0715_01369 PF07690 Major Facilitator Superfamily BJAB0715_01370 PF03594 Benzoate membrane transport protein BJAB0715_01371 PF00106 short chain dehydrogenase BJAB0715_01372 PF00970 Oxidoreductase FAD-binding domain BJAB0715_01372 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_01372 PF00175 Oxidoreductase NAD-binding domain BJAB0715_01373 PF00866 Ring hydroxylating beta subunit BJAB0715_01374 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BJAB0715_01374 PF00355 Rieske [2Fe-2S] domain BJAB0715_01375 PF03466 LysR substrate binding domain BJAB0715_01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01377 PF00403 Heavy-metal-associated domain BJAB0715_01378 PF09278 MerR, DNA binding BJAB0715_01378 PF00376 MerR family regulatory protein BJAB0715_01385 PF02601 Exonuclease VII, large subunit BJAB0715_01385 PF13742 OB-fold nucleic acid binding domain BJAB0715_01390 PF01810 LysE type translocator BJAB0715_01391 PF00313 'Cold-shock' DNA-binding domain BJAB0715_01393 PF03807 NADP oxidoreductase coenzyme F420-dependent BJAB0715_01393 PF14748 Pyrroline-5-carboxylate reductase dimerisation BJAB0715_01398 PF07690 Major Facilitator Superfamily BJAB0715_01399 PF01638 HxlR-like helix-turn-helix BJAB0715_01405 PF01406 tRNA synthetases class I (C) catalytic domain BJAB0715_01405 PF09190 DALR domain BJAB0715_01406 PF01380 SIS domain BJAB0715_01406 PF00571 CBS domain BJAB0715_01409 PF03968 OstA-like protein BJAB0715_01410 PF12399 Branched-chain amino acid ATP-binding cassette transporter BJAB0715_01410 PF00005 ABC transporter BJAB0715_01411 PF02321 Outer membrane efflux protein BJAB0715_01412 PF00664 ABC transporter transmembrane region BJAB0715_01412 PF00005 ABC transporter BJAB0715_01412 PF03412 Peptidase C39 family BJAB0715_01414 PF01205 Uncharacterized protein family UPF0029 BJAB0715_01415 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_01417 PF01596 O-methyltransferase BJAB0715_01419 PF00037 4Fe-4S binding domain BJAB0715_01419 PF11953 Domain of unknown function (DUF3470) BJAB0715_01421 PF05188 MutS domain II BJAB0715_01421 PF00488 MutS domain V BJAB0715_01421 PF05190 MutS family domain IV BJAB0715_01421 PF01624 MutS domain I BJAB0715_01421 PF05192 MutS domain III BJAB0715_01422 PF01037 Lrp/AsnC ligand binding domain BJAB0715_01423 PF13683 Integrase core domain BJAB0715_01423 PF13276 HTH-like domain BJAB0715_01424 PF01527 Transposase BJAB0715_01427 PF00892 EamA-like transporter family BJAB0715_01428 PF00563 EAL domain BJAB0715_01428 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_01428 PF03707 Bacterial signalling protein N terminal repeat BJAB0715_01429 PF03279 Bacterial lipid A biosynthesis acyltransferase BJAB0715_01431 PF07690 Major Facilitator Superfamily BJAB0715_01435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJAB0715_01435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJAB0715_01441 PF03466 LysR substrate binding domain BJAB0715_01441 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01442 PF01566 Natural resistance-associated macrophage protein BJAB0715_01443 PF03746 LamB/YcsF family BJAB0715_01444 PF07286 Protein of unknown function (DUF1445) BJAB0715_01446 PF00289 Biotin carboxylase, N-terminal domain BJAB0715_01446 PF00364 Biotin-requiring enzyme BJAB0715_01446 PF02785 Biotin carboxylase C-terminal domain BJAB0715_01446 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_01447 PF00654 Voltage gated chloride channel BJAB0715_01450 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_01452 PF13823 Alcohol dehydrogenase GroES-associated BJAB0715_01452 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_01452 PF00107 Zinc-binding dehydrogenase BJAB0715_01455 PF02785 Biotin carboxylase C-terminal domain BJAB0715_01455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_01455 PF00289 Biotin carboxylase, N-terminal domain BJAB0715_01456 PF02525 Flavodoxin-like fold BJAB0715_01457 PF01638 HxlR-like helix-turn-helix BJAB0715_01460 PF08753 NikR C terminal nickel binding domain BJAB0715_01460 PF01402 Ribbon-helix-helix protein, copG family BJAB0715_01461 PF01425 Amidase BJAB0715_01462 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJAB0715_01463 PF00005 ABC transporter BJAB0715_01489 PF01389 OmpA-like transmembrane domain BJAB0715_01489 PF00691 OmpA family BJAB0715_01491 PF17871 AAA lid domain BJAB0715_01491 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_01491 PF10431 C-terminal, D2-small domain, of ClpB protein BJAB0715_01491 PF07724 AAA domain (Cdc48 subfamily) BJAB0715_01497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01497 PF03466 LysR substrate binding domain BJAB0715_01499 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJAB0715_01500 PF07690 Major Facilitator Superfamily BJAB0715_01503 PF02677 Epoxyqueuosine reductase QueH BJAB0715_01504 PF09278 MerR, DNA binding BJAB0715_01504 PF00376 MerR family regulatory protein BJAB0715_01506 PF00701 Dihydrodipicolinate synthetase family BJAB0715_01508 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01509 PF05544 Proline racemase BJAB0715_01510 PF01266 FAD dependent oxidoreductase BJAB0715_01512 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01512 PF04324 BFD-like [2Fe-2S] binding domain BJAB0715_01514 PF00083 Sugar (and other) transporter BJAB0715_01515 PF00171 Aldehyde dehydrogenase family BJAB0715_01516 PF13520 Amino acid permease BJAB0715_01517 PF03313 Serine dehydratase alpha chain BJAB0715_01517 PF03315 Serine dehydratase beta chain BJAB0715_01518 PF01575 MaoC like domain BJAB0715_01518 PF00171 Aldehyde dehydrogenase family BJAB0715_01519 PF05138 Phenylacetic acid catabolic protein BJAB0715_01520 PF06243 Phenylacetic acid degradation B BJAB0715_01521 PF05138 Phenylacetic acid catabolic protein BJAB0715_01522 PF01883 Iron-sulfur cluster assembly protein BJAB0715_01523 PF00970 Oxidoreductase FAD-binding domain BJAB0715_01523 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_01523 PF00175 Oxidoreductase NAD-binding domain BJAB0715_01524 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01525 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01526 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJAB0715_01526 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BJAB0715_01526 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJAB0715_01527 PF02803 Thiolase, C-terminal domain BJAB0715_01527 PF00108 Thiolase, N-terminal domain BJAB0715_01528 PF00501 AMP-binding enzyme BJAB0715_01528 PF14535 AMP-binding enzyme C-terminal domain BJAB0715_01529 PF07848 PaaX-like protein BJAB0715_01529 PF08223 PaaX-like protein C-terminal domain BJAB0715_01530 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_01531 PF03061 Thioesterase superfamily BJAB0715_01533 PF00300 Histidine phosphatase superfamily (branch 1) BJAB0715_01542 PF00313 'Cold-shock' DNA-binding domain BJAB0715_01544 PF06719 AraC-type transcriptional regulator N-terminus BJAB0715_01544 PF12833 Helix-turn-helix domain BJAB0715_01546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01547 PF02515 CoA-transferase family III BJAB0715_01548 PF00682 HMGL-like BJAB0715_01549 PF07690 Major Facilitator Superfamily BJAB0715_01550 PF00199 Catalase BJAB0715_01551 PF01292 Prokaryotic cytochrome b561 BJAB0715_01552 PF03466 LysR substrate binding domain BJAB0715_01552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01553 PF02525 Flavodoxin-like fold BJAB0715_01554 PF09339 IclR helix-turn-helix domain BJAB0715_01554 PF01614 Bacterial transcriptional regulator BJAB0715_01555 PF01494 FAD binding domain BJAB0715_01556 PF01168 Alanine racemase, N-terminal domain BJAB0715_01556 PF00842 Alanine racemase, C-terminal domain BJAB0715_01557 PF07702 UTRA domain BJAB0715_01557 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01559 PF08402 TOBE domain BJAB0715_01559 PF00005 ABC transporter BJAB0715_01560 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01561 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01562 PF01266 FAD dependent oxidoreductase BJAB0715_01563 PF00266 Aminotransferase class-V BJAB0715_01564 PF13419 Haloacid dehalogenase-like hydrolase BJAB0715_01565 PF07690 Major Facilitator Superfamily BJAB0715_01566 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01566 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01566 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01567 PF02515 CoA-transferase family III BJAB0715_01568 PF09339 IclR helix-turn-helix domain BJAB0715_01569 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01570 PF03060 Nitronate monooxygenase BJAB0715_01571 PF07690 Major Facilitator Superfamily BJAB0715_01572 PF09339 IclR helix-turn-helix domain BJAB0715_01573 PF00108 Thiolase, N-terminal domain BJAB0715_01573 PF02803 Thiolase, C-terminal domain BJAB0715_01574 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BJAB0715_01574 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJAB0715_01574 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJAB0715_01576 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01577 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01577 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01577 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01578 PF07690 Major Facilitator Superfamily BJAB0715_01579 PF01144 Coenzyme A transferase BJAB0715_01580 PF01144 Coenzyme A transferase BJAB0715_01582 PF07690 Major Facilitator Superfamily BJAB0715_01584 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01584 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01584 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJAB0715_01584 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01587 PF03466 LysR substrate binding domain BJAB0715_01588 PF00682 HMGL-like BJAB0715_01589 PF00289 Biotin carboxylase, N-terminal domain BJAB0715_01589 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_01589 PF02785 Biotin carboxylase C-terminal domain BJAB0715_01589 PF00364 Biotin-requiring enzyme BJAB0715_01590 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_01591 PF01039 Carboxyl transferase domain BJAB0715_01592 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01592 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01592 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01593 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_01594 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_01594 PF00501 AMP-binding enzyme BJAB0715_01598 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01598 PF03466 LysR substrate binding domain BJAB0715_01605 PF02464 Competence-damaged protein BJAB0715_01605 PF00994 Probable molybdopterin binding domain BJAB0715_01605 PF18146 Damage-inducible protein CinA KH domain BJAB0715_01607 PF00199 Catalase BJAB0715_01607 PF06628 Catalase-related immune-responsive BJAB0715_01607 PF18011 C-terminal domain found in long catalases BJAB0715_01614 PF00717 Peptidase S24-like BJAB0715_01616 PF01037 Lrp/AsnC ligand binding domain BJAB0715_01616 PF13404 AsnC-type helix-turn-helix domain BJAB0715_01618 PF09308 LuxQ, periplasmic BJAB0715_01618 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_01618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_01618 PF00072 Response regulator receiver domain BJAB0715_01619 PF00072 Response regulator receiver domain BJAB0715_01621 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01622 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01623 PF00005 ABC transporter BJAB0715_01624 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJAB0715_01625 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJAB0715_01626 PF03466 LysR substrate binding domain BJAB0715_01626 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01627 PF01810 LysE type translocator BJAB0715_01628 PF00266 Aminotransferase class-V BJAB0715_01630 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_01631 PF00581 Rhodanese-like domain BJAB0715_01633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01633 PF03466 LysR substrate binding domain BJAB0715_01634 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_01635 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_01635 PF14834 Glutathione S-transferase, C-terminal domain BJAB0715_01636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01636 PF03466 LysR substrate binding domain BJAB0715_01637 PF03788 LrgA family BJAB0715_01638 PF04172 LrgB-like family BJAB0715_01639 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01642 PF07690 Major Facilitator Superfamily BJAB0715_01644 PF16957 Malonate decarboxylase, alpha subunit, transporter BJAB0715_01645 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BJAB0715_01646 PF06857 Malonate decarboxylase delta subunit (MdcD) BJAB0715_01647 PF01039 Carboxyl transferase domain BJAB0715_01649 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BJAB0715_01650 PF00698 Acyl transferase domain BJAB0715_01653 PF03466 LysR substrate binding domain BJAB0715_01653 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01654 PF00155 Aminotransferase class I and II BJAB0715_01654 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_01656 PF02322 Cytochrome bd terminal oxidase subunit II BJAB0715_01657 PF01654 Cytochrome bd terminal oxidase subunit I BJAB0715_01659 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01659 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01659 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01660 PF00296 Luciferase-like monooxygenase BJAB0715_01661 PF00083 Sugar (and other) transporter BJAB0715_01663 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BJAB0715_01664 PF00005 ABC transporter BJAB0715_01665 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01666 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BJAB0715_01667 PF01177 Asp/Glu/Hydantoin racemase BJAB0715_01668 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BJAB0715_01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01670 PF03466 LysR substrate binding domain BJAB0715_01672 PF13382 Adenine deaminase C-terminal domain BJAB0715_01672 PF01979 Amidohydrolase family BJAB0715_01673 PF03960 ArsC family BJAB0715_01674 PF01022 Bacterial regulatory protein, arsR family BJAB0715_01676 PF01758 Sodium Bile acid symporter family BJAB0715_01677 PF03466 LysR substrate binding domain BJAB0715_01677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01680 PF13192 Thioredoxin domain BJAB0715_01680 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01683 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_01684 PF00588 SpoU rRNA Methylase family BJAB0715_01685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJAB0715_01685 PF14579 Helix-hairpin-helix motif BJAB0715_01685 PF01336 OB-fold nucleic acid binding domain BJAB0715_01685 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJAB0715_01685 PF02811 PHP domain BJAB0715_01686 PF17763 Glutaminase/Asparaginase C-terminal domain BJAB0715_01686 PF00710 Asparaginase, N-terminal BJAB0715_01687 PF00375 Sodium:dicarboxylate symporter family BJAB0715_01688 PF00155 Aminotransferase class I and II BJAB0715_01689 PF01641 SelR domain BJAB0715_01690 PF00255 Glutathione peroxidase BJAB0715_01691 PF12852 Cupin BJAB0715_01691 PF12833 Helix-turn-helix domain BJAB0715_01693 PF00155 Aminotransferase class I and II BJAB0715_01694 PF01909 Nucleotidyltransferase domain BJAB0715_01694 PF08335 GlnD PII-uridylyltransferase BJAB0715_01694 PF01966 HD domain BJAB0715_01695 PF02222 ATP-grasp domain BJAB0715_01697 PF05437 Branched-chain amino acid transport protein (AzlD) BJAB0715_01698 PF03591 AzlC protein BJAB0715_01703 PF06071 Protein of unknown function (DUF933) BJAB0715_01703 PF01926 50S ribosome-binding GTPase BJAB0715_01704 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01705 PF09383 NIL domain BJAB0715_01705 PF00005 ABC transporter BJAB0715_01706 PF03180 NLPA lipoprotein BJAB0715_01707 PF03180 NLPA lipoprotein BJAB0715_01708 PF00296 Luciferase-like monooxygenase BJAB0715_01710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01714 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01715 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01716 PF00005 ABC transporter BJAB0715_01718 PF01037 Lrp/AsnC ligand binding domain BJAB0715_01719 PF01709 Transcriptional regulator BJAB0715_01721 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_01724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01724 PF03466 LysR substrate binding domain BJAB0715_01726 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BJAB0715_01728 PF00892 EamA-like transporter family BJAB0715_01732 PF13954 PapC N-terminal domain BJAB0715_01732 PF13953 PapC C-terminal domain BJAB0715_01732 PF00577 Outer membrane usher protein BJAB0715_01733 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BJAB0715_01733 PF02753 Pili assembly chaperone PapD, C-terminal domain BJAB0715_01734 PF16970 Type-1 fimbrial protein, A BJAB0715_01737 PF04055 Radical SAM superfamily BJAB0715_01737 PF06968 Biotin and Thiamin Synthesis associated domain BJAB0715_01738 PF08331 Domain of unknown function (DUF1730) BJAB0715_01739 PF03853 YjeF-related protein N-terminus BJAB0715_01739 PF01256 Carbohydrate kinase BJAB0715_01740 PF02075 Crossover junction endodeoxyribonuclease RuvC BJAB0715_01744 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_01748 PF02773 S-adenosylmethionine synthetase, C-terminal domain BJAB0715_01748 PF00438 S-adenosylmethionine synthetase, N-terminal domain BJAB0715_01748 PF02772 S-adenosylmethionine synthetase, central domain BJAB0715_01750 PF00456 Transketolase, thiamine diphosphate binding domain BJAB0715_01750 PF02780 Transketolase, C-terminal domain BJAB0715_01750 PF02779 Transketolase, pyrimidine binding domain BJAB0715_01752 PF04264 YceI-like domain BJAB0715_01754 PF09992 Phosphodiester glycosidase BJAB0715_01756 PF05958 tRNA (Uracil-5-)-methyltransferase BJAB0715_01757 PF04229 GrpB protein BJAB0715_01758 PF14850 DNA-binding domain of Proline dehydrogenase BJAB0715_01758 PF00171 Aldehyde dehydrogenase family BJAB0715_01758 PF01619 Proline dehydrogenase BJAB0715_01758 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BJAB0715_01759 PF01037 Lrp/AsnC ligand binding domain BJAB0715_01760 PF00474 Sodium:solute symporter family BJAB0715_01761 PF02146 Sir2 family BJAB0715_01762 PF01597 Glycine cleavage H-protein BJAB0715_01763 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJAB0715_01763 PF12833 Helix-turn-helix domain BJAB0715_01765 PF00664 ABC transporter transmembrane region BJAB0715_01765 PF00005 ABC transporter BJAB0715_01766 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BJAB0715_01767 PF06912 Protein of unknown function (DUF1275) BJAB0715_01768 PF00375 Sodium:dicarboxylate symporter family BJAB0715_01771 PF08007 Cupin superfamily protein BJAB0715_01772 PF02545 Maf-like protein BJAB0715_01774 PF00162 Phosphoglycerate kinase BJAB0715_01776 PF01116 Fructose-bisphosphate aldolase class-II BJAB0715_01777 PF00639 PPIC-type PPIASE domain BJAB0715_01777 PF09312 SurA N-terminal domain BJAB0715_01778 PF03968 OstA-like protein BJAB0715_01778 PF04453 LPS transport system D BJAB0715_01779 PF01636 Phosphotransferase enzyme family BJAB0715_01780 PF00483 Nucleotidyl transferase BJAB0715_01781 PF02527 rRNA small subunit methyltransferase G BJAB0715_01782 PF13614 AAA domain BJAB0715_01783 PF02195 ParB-like nuclease domain BJAB0715_01783 PF17762 HTH domain found in ParB protein BJAB0715_01784 PF01618 MotA/TolQ/ExbB proton channel family BJAB0715_01786 PF00005 ABC transporter BJAB0715_01786 PF00664 ABC transporter transmembrane region BJAB0715_01787 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BJAB0715_01788 PF02348 Cytidylyltransferase BJAB0715_01789 PF09115 DNA polymerase III, delta subunit, C terminal BJAB0715_01791 PF01026 TatD related DNase BJAB0715_01794 PF02501 Type II secretion system (T2SS), protein I BJAB0715_01794 PF07963 Prokaryotic N-terminal methylation motif BJAB0715_01795 PF07963 Prokaryotic N-terminal methylation motif BJAB0715_01795 PF11612 Type II secretion system (T2SS), protein J BJAB0715_01796 PF03934 Type II secretion system (T2SS), protein K BJAB0715_01798 PF03167 Uracil DNA glycosylase superfamily BJAB0715_01800 PF14437 MafB19-like deaminase BJAB0715_01802 PF02224 Cytidylate kinase BJAB0715_01803 PF00575 S1 RNA binding domain BJAB0715_01804 PF00216 Bacterial DNA-binding protein BJAB0715_01806 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BJAB0715_01808 PF00743 Flavin-binding monooxygenase-like BJAB0715_01810 PF03969 AFG1-like ATPase BJAB0715_01811 PF01274 Malate synthase BJAB0715_01812 PF02472 Biopolymer transport protein ExbD/TolR BJAB0715_01813 PF02472 Biopolymer transport protein ExbD/TolR BJAB0715_01814 PF01618 MotA/TolQ/ExbB proton channel family BJAB0715_01816 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01816 PF00593 TonB dependent receptor BJAB0715_01817 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJAB0715_01819 PF01432 Peptidase family M3 BJAB0715_01820 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01821 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01822 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJAB0715_01822 PF00005 ABC transporter BJAB0715_01825 PF00459 Inositol monophosphatase family BJAB0715_01827 PF01649 Ribosomal protein S20 BJAB0715_01828 PF13460 NAD(P)H-binding BJAB0715_01829 PF03737 Aldolase/RraA BJAB0715_01833 PF03461 TRCF domain BJAB0715_01833 PF02559 CarD-like/TRCF domain BJAB0715_01833 PF17757 UvrB interaction domain BJAB0715_01833 PF00271 Helicase conserved C-terminal domain BJAB0715_01833 PF00270 DEAD/DEAH box helicase BJAB0715_01835 PF00211 Adenylate and Guanylate cyclase catalytic domain BJAB0715_01836 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_01837 PF00012 Hsp70 protein BJAB0715_01838 PF07743 HSCB C-terminal oligomerisation domain BJAB0715_01838 PF00226 DnaJ domain BJAB0715_01839 PF01521 Iron-sulphur cluster biosynthesis BJAB0715_01840 PF01592 NifU-like N terminal domain BJAB0715_01841 PF00266 Aminotransferase class-V BJAB0715_01842 PF02082 Transcriptional regulator BJAB0715_01845 PF00216 Bacterial DNA-binding protein BJAB0715_01846 PF09312 SurA N-terminal domain BJAB0715_01846 PF00639 PPIC-type PPIASE domain BJAB0715_01847 PF12852 Cupin BJAB0715_01847 PF12833 Helix-turn-helix domain BJAB0715_01848 PF00487 Fatty acid desaturase BJAB0715_01849 PF00487 Fatty acid desaturase BJAB0715_01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01850 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01851 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_01851 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_01851 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_01852 PF03109 ABC1 family BJAB0715_01854 PF04073 Aminoacyl-tRNA editing domain BJAB0715_01855 PF06276 Ferric iron reductase FhuF-like transporter BJAB0715_01855 PF04183 IucA / IucC family BJAB0715_01856 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BJAB0715_01857 PF07690 Major Facilitator Superfamily BJAB0715_01858 PF04183 IucA / IucC family BJAB0715_01858 PF06276 Ferric iron reductase FhuF-like transporter BJAB0715_01859 PF04183 IucA / IucC family BJAB0715_01859 PF06276 Ferric iron reductase FhuF-like transporter BJAB0715_01861 PF03737 Aldolase/RraA BJAB0715_01862 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01862 PF00593 TonB dependent receptor BJAB0715_01871 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BJAB0715_01872 PF02277 Phosphoribosyltransferase BJAB0715_01873 PF00300 Histidine phosphatase superfamily (branch 1) BJAB0715_01875 PF02654 Cobalamin-5-phosphate synthase BJAB0715_01876 PF00793 DAHP synthetase I family BJAB0715_01877 PF01925 Sulfite exporter TauE/SafE BJAB0715_01881 PF00593 TonB dependent receptor BJAB0715_01881 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01882 PF02684 Lipid-A-disaccharide synthetase BJAB0715_01884 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_01885 PF00005 ABC transporter BJAB0715_01892 PF01230 HIT domain BJAB0715_01898 PF08241 Methyltransferase domain BJAB0715_01899 PF00561 alpha/beta hydrolase fold BJAB0715_01900 PF01053 Cys/Met metabolism PLP-dependent enzyme BJAB0715_01902 PF02575 YbaB/EbfC DNA-binding family BJAB0715_01903 PF02132 RecR protein BJAB0715_01903 PF13662 Toprim domain BJAB0715_01904 PF00570 HRDC domain BJAB0715_01904 PF01612 3'-5' exonuclease BJAB0715_01908 PF05166 YcgL domain BJAB0715_01910 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_01910 PF17862 AAA+ lid domain BJAB0715_01910 PF01434 Peptidase family M41 BJAB0715_01912 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_01913 PF05175 Methyltransferase small domain BJAB0715_01914 PF01264 Chorismate synthase BJAB0715_01915 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_01915 PF08448 PAS fold BJAB0715_01918 PF04055 Radical SAM superfamily BJAB0715_01919 PF00676 Dehydrogenase E1 component BJAB0715_01920 PF02780 Transketolase, C-terminal domain BJAB0715_01920 PF02779 Transketolase, pyrimidine binding domain BJAB0715_01921 PF02817 e3 binding domain BJAB0715_01921 PF00364 Biotin-requiring enzyme BJAB0715_01921 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJAB0715_01922 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJAB0715_01922 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_01923 PF00106 short chain dehydrogenase BJAB0715_01924 PF00107 Zinc-binding dehydrogenase BJAB0715_01924 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_01925 PF01062 Bestrophin, RFP-TM, chloride channel BJAB0715_01926 PF02954 Bacterial regulatory protein, Fis family BJAB0715_01926 PF00072 Response regulator receiver domain BJAB0715_01926 PF00158 Sigma-54 interaction domain BJAB0715_01927 PF00753 Metallo-beta-lactamase superfamily BJAB0715_01927 PF04273 Putative phosphatase (DUF442) BJAB0715_01928 PF00753 Metallo-beta-lactamase superfamily BJAB0715_01928 PF04273 Putative phosphatase (DUF442) BJAB0715_01929 PF01925 Sulfite exporter TauE/SafE BJAB0715_01932 PF06445 GyrI-like small molecule binding domain BJAB0715_01932 PF12833 Helix-turn-helix domain BJAB0715_01934 PF02525 Flavodoxin-like fold BJAB0715_01939 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BJAB0715_01940 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01941 PF00005 ABC transporter BJAB0715_01944 PF00083 Sugar (and other) transporter BJAB0715_01945 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_01945 PF00593 TonB dependent receptor BJAB0715_01946 PF10415 Fumarase C C-terminus BJAB0715_01946 PF00206 Lyase BJAB0715_01949 PF03466 LysR substrate binding domain BJAB0715_01949 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01950 PF03466 LysR substrate binding domain BJAB0715_01951 PF00108 Thiolase, N-terminal domain BJAB0715_01951 PF02803 Thiolase, C-terminal domain BJAB0715_01952 PF02667 Short chain fatty acid transporter BJAB0715_01953 PF01144 Coenzyme A transferase BJAB0715_01954 PF01144 Coenzyme A transferase BJAB0715_01955 PF03466 LysR substrate binding domain BJAB0715_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01960 PF06719 AraC-type transcriptional regulator N-terminus BJAB0715_01960 PF12833 Helix-turn-helix domain BJAB0715_01961 PF07690 Major Facilitator Superfamily BJAB0715_01962 PF01738 Dienelactone hydrolase family BJAB0715_01965 PF01613 Flavin reductase like domain BJAB0715_01967 PF14525 AraC-binding-like domain BJAB0715_01967 PF12833 Helix-turn-helix domain BJAB0715_01968 PF00970 Oxidoreductase FAD-binding domain BJAB0715_01968 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_01968 PF00175 Oxidoreductase NAD-binding domain BJAB0715_01969 PF00866 Ring hydroxylating beta subunit BJAB0715_01970 PF00355 Rieske [2Fe-2S] domain BJAB0715_01970 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BJAB0715_01971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_01971 PF03459 TOBE domain BJAB0715_01973 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_01974 PF00005 ABC transporter BJAB0715_01974 PF03459 TOBE domain BJAB0715_01975 PF00106 short chain dehydrogenase BJAB0715_01976 PF00550 Phosphopantetheine attachment site BJAB0715_01976 PF00857 Isochorismatase family BJAB0715_01978 PF00149 Calcineurin-like phosphoesterase BJAB0715_01981 PF13090 Polyphosphate kinase C-terminal domain 2 BJAB0715_01981 PF13089 Polyphosphate kinase N-terminal domain BJAB0715_01981 PF17941 Polyphosphate kinase C-terminal domain 1 BJAB0715_01981 PF02503 Polyphosphate kinase middle domain BJAB0715_01982 PF08042 PqqA family BJAB0715_01983 PF12706 Beta-lactamase superfamily domain BJAB0715_01984 PF03070 TENA/THI-4/PQQC family BJAB0715_01985 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BJAB0715_01986 PF13186 Iron-sulfur cluster-binding domain BJAB0715_01986 PF04055 Radical SAM superfamily BJAB0715_01987 PF01244 Membrane dipeptidase (Peptidase family M19) BJAB0715_01991 PF13091 PLD-like domain BJAB0715_01994 PF00199 Catalase BJAB0715_01996 PF00107 Zinc-binding dehydrogenase BJAB0715_01996 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_01999 PF13954 PapC N-terminal domain BJAB0715_01999 PF13953 PapC C-terminal domain BJAB0715_01999 PF00577 Outer membrane usher protein BJAB0715_02000 PF02753 Pili assembly chaperone PapD, C-terminal domain BJAB0715_02000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BJAB0715_02012 PF07690 Major Facilitator Superfamily BJAB0715_02013 PF13533 Biotin-lipoyl like BJAB0715_02015 PF13359 DDE superfamily endonuclease BJAB0715_02015 PF13613 Helix-turn-helix of DDE superfamily endonuclease BJAB0715_02019 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BJAB0715_02020 PF14572 Phosphoribosyl synthetase-associated domain BJAB0715_02020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BJAB0715_02029 PF01381 Helix-turn-helix BJAB0715_02030 PF13936 Helix-turn-helix domain BJAB0715_02030 PF00665 Integrase core domain BJAB0715_02043 PF00005 ABC transporter BJAB0715_02047 PF00107 Zinc-binding dehydrogenase BJAB0715_02047 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_02048 PF06719 AraC-type transcriptional regulator N-terminus BJAB0715_02048 PF12833 Helix-turn-helix domain BJAB0715_02049 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJAB0715_02049 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJAB0715_02050 PF07690 Major Facilitator Superfamily BJAB0715_02051 PF01370 NAD dependent epimerase/dehydratase family BJAB0715_02052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02052 PF03466 LysR substrate binding domain BJAB0715_02054 PF00920 Dehydratase family BJAB0715_02055 PF00171 Aldehyde dehydrogenase family BJAB0715_02058 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_02058 PF00529 HlyD membrane-fusion protein of T1SS BJAB0715_02063 PF03466 LysR substrate binding domain BJAB0715_02063 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02065 PF08450 SMP-30/Gluconolactonase/LRE-like region BJAB0715_02068 PF04909 Amidohydrolase BJAB0715_02069 PF07690 Major Facilitator Superfamily BJAB0715_02076 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_02076 PF00501 AMP-binding enzyme BJAB0715_02078 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_02078 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_02078 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJAB0715_02078 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02079 PF01575 MaoC like domain BJAB0715_02080 PF00106 short chain dehydrogenase BJAB0715_02083 PF03466 LysR substrate binding domain BJAB0715_02083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02084 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02084 PF08359 YsiA-like protein, C-terminal region BJAB0715_02085 PF12706 Beta-lactamase superfamily domain BJAB0715_02087 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02089 PF09278 MerR, DNA binding BJAB0715_02089 PF00376 MerR family regulatory protein BJAB0715_02091 PF00106 short chain dehydrogenase BJAB0715_02092 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02092 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_02093 PF00561 alpha/beta hydrolase fold BJAB0715_02095 PF00171 Aldehyde dehydrogenase family BJAB0715_02097 PF07690 Major Facilitator Superfamily BJAB0715_02098 PF00920 Dehydratase family BJAB0715_02099 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_02099 PF07729 FCD domain BJAB0715_02101 PF03466 LysR substrate binding domain BJAB0715_02101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02102 PF13378 Enolase C-terminal domain-like BJAB0715_02102 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJAB0715_02103 PF02426 Muconolactone delta-isomerase BJAB0715_02104 PF04444 Catechol dioxygenase N terminus BJAB0715_02104 PF00775 Dioxygenase BJAB0715_02105 PF01144 Coenzyme A transferase BJAB0715_02106 PF01144 Coenzyme A transferase BJAB0715_02107 PF02803 Thiolase, C-terminal domain BJAB0715_02107 PF00108 Thiolase, N-terminal domain BJAB0715_02108 PF12146 Serine aminopeptidase, S33 BJAB0715_02109 PF01804 Penicillin amidase BJAB0715_02110 PF00171 Aldehyde dehydrogenase family BJAB0715_02112 PF07833 Copper amine oxidase N-terminal domain BJAB0715_02112 PF02727 Copper amine oxidase, N2 domain BJAB0715_02112 PF02728 Copper amine oxidase, N3 domain BJAB0715_02112 PF01179 Copper amine oxidase, enzyme domain BJAB0715_02113 PF02311 AraC-like ligand binding domain BJAB0715_02113 PF12833 Helix-turn-helix domain BJAB0715_02114 PF01613 Flavin reductase like domain BJAB0715_02115 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_02115 PF00175 Oxidoreductase NAD-binding domain BJAB0715_02118 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BJAB0715_02118 PF00355 Rieske [2Fe-2S] domain BJAB0715_02121 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02122 PF01425 Amidase BJAB0715_02124 PF07690 Major Facilitator Superfamily BJAB0715_02126 PF00106 short chain dehydrogenase BJAB0715_02129 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_02129 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02129 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02130 PF03466 LysR substrate binding domain BJAB0715_02131 PF09339 IclR helix-turn-helix domain BJAB0715_02131 PF01614 Bacterial transcriptional regulator BJAB0715_02132 PF00753 Metallo-beta-lactamase superfamily BJAB0715_02134 PF04143 Sulphur transport BJAB0715_02136 PF01011 PQQ enzyme repeat BJAB0715_02136 PF13360 PQQ-like domain BJAB0715_02137 PF04966 Carbohydrate-selective porin, OprB family BJAB0715_02138 PF04966 Carbohydrate-selective porin, OprB family BJAB0715_02139 PF05048 Periplasmic copper-binding protein (NosD) BJAB0715_02140 PF01487 Type I 3-dehydroquinase BJAB0715_02141 PF00775 Dioxygenase BJAB0715_02142 PF00775 Dioxygenase BJAB0715_02142 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BJAB0715_02143 PF02627 Carboxymuconolactone decarboxylase family BJAB0715_02144 PF07690 Major Facilitator Superfamily BJAB0715_02145 PF00561 alpha/beta hydrolase fold BJAB0715_02146 PF00206 Lyase BJAB0715_02146 PF10397 Adenylosuccinate lyase C-terminus BJAB0715_02147 PF00108 Thiolase, N-terminal domain BJAB0715_02147 PF02803 Thiolase, C-terminal domain BJAB0715_02148 PF01144 Coenzyme A transferase BJAB0715_02149 PF01144 Coenzyme A transferase BJAB0715_02150 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BJAB0715_02151 PF04977 Septum formation initiator BJAB0715_02152 PF04239 Protein of unknown function (DUF421) BJAB0715_02153 PF00113 Enolase, C-terminal TIM barrel domain BJAB0715_02153 PF03952 Enolase, N-terminal domain BJAB0715_02154 PF00793 DAHP synthetase I family BJAB0715_02155 PF06418 CTP synthase N-terminus BJAB0715_02155 PF00117 Glutamine amidotransferase class-I BJAB0715_02163 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_02163 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02166 PF00793 DAHP synthetase I family BJAB0715_02167 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BJAB0715_02168 PF02861 Clp amino terminal domain, pathogenicity island component BJAB0715_02168 PF07724 AAA domain (Cdc48 subfamily) BJAB0715_02168 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_02168 PF10431 C-terminal, D2-small domain, of ClpB protein BJAB0715_02168 PF17871 AAA lid domain BJAB0715_02169 PF02617 ATP-dependent Clp protease adaptor protein ClpS BJAB0715_02171 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJAB0715_02171 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJAB0715_02175 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BJAB0715_02176 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_02176 PF00585 C-terminal regulatory domain of Threonine dehydratase BJAB0715_02177 PF02254 TrkA-N domain BJAB0715_02177 PF02080 TrkA-C domain BJAB0715_02178 PF02386 Cation transport protein BJAB0715_02179 PF02253 Phospholipase A1 BJAB0715_02180 PF08367 Peptidase M16C associated BJAB0715_02180 PF05193 Peptidase M16 inactive domain BJAB0715_02180 PF00675 Insulinase (Peptidase family M16) BJAB0715_02181 PF00593 TonB dependent receptor BJAB0715_02181 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_02182 PF00294 pfkB family carbohydrate kinase BJAB0715_02184 PF07290 Protein of unknown function (DUF1449) BJAB0715_02187 PF01654 Cytochrome bd terminal oxidase subunit I BJAB0715_02188 PF02322 Cytochrome bd terminal oxidase subunit II BJAB0715_02191 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BJAB0715_02193 PF02881 SRP54-type protein, helical bundle domain BJAB0715_02193 PF00448 SRP54-type protein, GTPase domain BJAB0715_02199 PF00478 IMP dehydrogenase / GMP reductase domain BJAB0715_02199 PF00571 CBS domain BJAB0715_02200 PF00202 Aminotransferase class-III BJAB0715_02201 PF00462 Glutaredoxin BJAB0715_02203 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02203 PF03466 LysR substrate binding domain BJAB0715_02204 PF00557 Metallopeptidase family M24 BJAB0715_02205 PF05525 Branched-chain amino acid transport protein BJAB0715_02210 PF00391 PEP-utilising enzyme, mobile domain BJAB0715_02210 PF05524 PEP-utilising enzyme, N-terminal BJAB0715_02210 PF02896 PEP-utilising enzyme, TIM barrel domain BJAB0715_02210 PF00381 PTS HPr component phosphorylation site BJAB0715_02210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJAB0715_02211 PF00294 pfkB family carbohydrate kinase BJAB0715_02212 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJAB0715_02212 PF02378 Phosphotransferase system, EIIC BJAB0715_02215 PF03707 Bacterial signalling protein N terminal repeat BJAB0715_02215 PF00563 EAL domain BJAB0715_02215 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_02217 PF07995 Glucose / Sorbosone dehydrogenase BJAB0715_02218 PF02586 SOS response associated peptidase (SRAP) BJAB0715_02219 PF01740 STAS domain BJAB0715_02219 PF00916 Sulfate permease family BJAB0715_02220 PF00082 Subtilase family BJAB0715_02220 PF05922 Peptidase inhibitor I9 BJAB0715_02222 PF00324 Amino acid permease BJAB0715_02223 PF00266 Aminotransferase class-V BJAB0715_02224 PF00266 Aminotransferase class-V BJAB0715_02225 PF01037 Lrp/AsnC ligand binding domain BJAB0715_02230 PF13419 Haloacid dehalogenase-like hydrolase BJAB0715_02231 PF01479 S4 domain BJAB0715_02232 PF00154 recA bacterial DNA recombination protein BJAB0715_02233 PF02631 RecX family BJAB0715_02235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BJAB0715_02235 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_02236 PF07977 FabA-like domain BJAB0715_02237 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_02237 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BJAB0715_02239 PF01103 Surface antigen BJAB0715_02239 PF07244 Surface antigen variable number repeat BJAB0715_02240 PF02163 Peptidase family M50 BJAB0715_02240 PF13180 PDZ domain BJAB0715_02240 PF17820 PDZ domain BJAB0715_02241 PF13288 DXP reductoisomerase C-terminal domain BJAB0715_02241 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BJAB0715_02241 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BJAB0715_02243 PF01255 Putative undecaprenyl diphosphate synthase BJAB0715_02244 PF01765 Ribosome recycling factor BJAB0715_02245 PF00696 Amino acid kinase family BJAB0715_02246 PF04055 Radical SAM superfamily BJAB0715_02246 PF00919 Uncharacterized protein family UPF0004 BJAB0715_02246 PF18693 TRAM domain BJAB0715_02248 PF00989 PAS fold BJAB0715_02248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02248 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02249 PF00158 Sigma-54 interaction domain BJAB0715_02249 PF02954 Bacterial regulatory protein, Fis family BJAB0715_02249 PF00072 Response regulator receiver domain BJAB0715_02250 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02254 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJAB0715_02254 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJAB0715_02256 PF02542 YgbB family BJAB0715_02258 PF01266 FAD dependent oxidoreductase BJAB0715_02262 PF00206 Lyase BJAB0715_02262 PF10415 Fumarase C C-terminus BJAB0715_02263 PF16363 GDP-mannose 4,6 dehydratase BJAB0715_02264 PF02635 DsrE/DsrF-like family BJAB0715_02268 PF00892 EamA-like transporter family BJAB0715_02269 PF00155 Aminotransferase class I and II BJAB0715_02269 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_02270 PF01638 HxlR-like helix-turn-helix BJAB0715_02271 PF00994 Probable molybdopterin binding domain BJAB0715_02271 PF03454 MoeA C-terminal region (domain IV) BJAB0715_02271 PF03453 MoeA N-terminal region (domain I and II) BJAB0715_02272 PF01967 MoaC family BJAB0715_02272 PF00994 Probable molybdopterin binding domain BJAB0715_02273 PF02391 MoaE protein BJAB0715_02275 PF04055 Radical SAM superfamily BJAB0715_02275 PF06463 Molybdenum Cofactor Synthesis C BJAB0715_02276 PF01568 Molydopterin dinucleotide binding domain BJAB0715_02276 PF00384 Molybdopterin oxidoreductase BJAB0715_02276 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJAB0715_02277 PF12804 MobA-like NTP transferase domain BJAB0715_02278 PF01568 Molydopterin dinucleotide binding domain BJAB0715_02278 PF00384 Molybdopterin oxidoreductase BJAB0715_02278 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJAB0715_02278 PF04324 BFD-like [2Fe-2S] binding domain BJAB0715_02279 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJAB0715_02279 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJAB0715_02279 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02279 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJAB0715_02279 PF04324 BFD-like [2Fe-2S] binding domain BJAB0715_02280 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJAB0715_02280 PF13806 Rieske-like [2Fe-2S] domain BJAB0715_02280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02280 PF04324 BFD-like [2Fe-2S] binding domain BJAB0715_02280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJAB0715_02280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJAB0715_02282 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_02282 PF00072 Response regulator receiver domain BJAB0715_02283 PF00005 ABC transporter BJAB0715_02284 PF13438 Domain of unknown function (DUF4113) BJAB0715_02284 PF00817 impB/mucB/samB family BJAB0715_02284 PF11799 impB/mucB/samB family C-terminal domain BJAB0715_02284 PF11798 IMS family HHH motif BJAB0715_02285 PF01220 Dehydroquinase class II BJAB0715_02286 PF00364 Biotin-requiring enzyme BJAB0715_02287 PF02785 Biotin carboxylase C-terminal domain BJAB0715_02287 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_02287 PF00289 Biotin carboxylase, N-terminal domain BJAB0715_02289 PF12832 MFS_1 like family BJAB0715_02294 PF01645 Conserved region in glutamate synthase BJAB0715_02299 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BJAB0715_02299 PF01565 FAD binding domain BJAB0715_02300 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJAB0715_02302 PF00465 Iron-containing alcohol dehydrogenase BJAB0715_02303 PF03061 Thioesterase superfamily BJAB0715_02304 PF04185 Phosphoesterase family BJAB0715_02304 PF05506 Domain of unknown function (DUF756) BJAB0715_02305 PF12169 DNA polymerase III subunits gamma and tau domain III BJAB0715_02305 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BJAB0715_02305 PF12170 DNA polymerase III tau subunit V interacting with alpha BJAB0715_02308 PF07690 Major Facilitator Superfamily BJAB0715_02313 PF02803 Thiolase, C-terminal domain BJAB0715_02313 PF00108 Thiolase, N-terminal domain BJAB0715_02315 PF03466 LysR substrate binding domain BJAB0715_02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02317 PF01810 LysE type translocator BJAB0715_02318 PF01037 Lrp/AsnC ligand binding domain BJAB0715_02319 PF03594 Benzoate membrane transport protein BJAB0715_02320 PF02308 MgtC family BJAB0715_02321 PF00689 Cation transporting ATPase, C-terminus BJAB0715_02321 PF00690 Cation transporter/ATPase, N-terminus BJAB0715_02325 PF00582 Universal stress protein family BJAB0715_02326 PF00005 ABC transporter BJAB0715_02326 PF12848 ABC transporter BJAB0715_02326 PF16326 ABC transporter C-terminal domain BJAB0715_02331 PF00593 TonB dependent receptor BJAB0715_02331 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_02339 PF00216 Bacterial DNA-binding protein BJAB0715_02345 PF01471 Putative peptidoglycan binding domain BJAB0715_02345 PF13401 AAA domain BJAB0715_02351 PF10502 Signal peptidase, peptidase S26 BJAB0715_02357 PF11985 Protein of unknown function (DUF3486) BJAB0715_02358 PF03237 Terminase-like family BJAB0715_02361 PF06074 Protein of unknown function (DUF935) BJAB0715_02362 PF04233 Phage Mu protein F like protein BJAB0715_02363 PF05069 Phage virion morphogenesis family BJAB0715_02366 PF10124 Mu-like prophage major head subunit gpT BJAB0715_02389 PF00924 Mechanosensitive ion channel BJAB0715_02390 PF00593 TonB dependent receptor BJAB0715_02390 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_02391 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02393 PF01037 Lrp/AsnC ligand binding domain BJAB0715_02394 PF01817 Chorismate mutase type II BJAB0715_02399 PF00577 Outer membrane usher protein BJAB0715_02399 PF13954 PapC N-terminal domain BJAB0715_02399 PF13953 PapC C-terminal domain BJAB0715_02402 PF11940 Domain of unknown function (DUF3458) Ig-like fold BJAB0715_02402 PF01433 Peptidase family M1 domain BJAB0715_02402 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BJAB0715_02405 PF02110 Hydroxyethylthiazole kinase family BJAB0715_02407 PF14493 Helix-turn-helix domain BJAB0715_02407 PF05970 PIF1-like helicase BJAB0715_02408 PF00465 Iron-containing alcohol dehydrogenase BJAB0715_02411 PF00171 Aldehyde dehydrogenase family BJAB0715_02412 PF13520 Amino acid permease BJAB0715_02413 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BJAB0715_02414 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BJAB0715_02415 PF00117 Glutamine amidotransferase class-I BJAB0715_02415 PF02540 NAD synthase BJAB0715_02415 PF00958 GMP synthase C terminal domain BJAB0715_02416 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJAB0715_02416 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BJAB0715_02417 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJAB0715_02418 PF00149 Calcineurin-like phosphoesterase BJAB0715_02420 PF00881 Nitroreductase family BJAB0715_02422 PF17209 Hfq protein BJAB0715_02424 PF01119 DNA mismatch repair protein, C-terminal domain BJAB0715_02424 PF08676 MutL C terminal dimerisation domain BJAB0715_02425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BJAB0715_02426 PF01479 S4 domain BJAB0715_02426 PF00849 RNA pseudouridylate synthase BJAB0715_02429 PF00849 RNA pseudouridylate synthase BJAB0715_02429 PF01479 S4 domain BJAB0715_02431 PF04284 Protein of unknown function (DUF441) BJAB0715_02432 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02432 PF03466 LysR substrate binding domain BJAB0715_02435 PF07690 Major Facilitator Superfamily BJAB0715_02436 PF00027 Cyclic nucleotide-binding domain BJAB0715_02436 PF00520 Ion transport protein BJAB0715_02438 PF11791 Aconitate B N-terminal domain BJAB0715_02438 PF06434 Aconitate hydratase 2 N-terminus BJAB0715_02438 PF00330 Aconitase family (aconitate hydratase) BJAB0715_02440 PF11798 IMS family HHH motif BJAB0715_02440 PF00817 impB/mucB/samB family BJAB0715_02440 PF13438 Domain of unknown function (DUF4113) BJAB0715_02440 PF11799 impB/mucB/samB family C-terminal domain BJAB0715_02492 PF00772 DnaB-like helicase N terminal domain BJAB0715_02492 PF03796 DnaB-like helicase C terminal domain BJAB0715_02515 PF07244 Surface antigen variable number repeat BJAB0715_02515 PF17243 POTRA domain TamA domain 1 BJAB0715_02515 PF01103 Surface antigen BJAB0715_02516 PF07690 Major Facilitator Superfamily BJAB0715_02517 PF03232 Ubiquinone biosynthesis protein COQ7 BJAB0715_02519 PF00120 Glutamine synthetase, catalytic domain BJAB0715_02520 PF00072 Response regulator receiver domain BJAB0715_02520 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_02521 PF13493 Domain of unknown function (DUF4118) BJAB0715_02521 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02521 PF02702 Osmosensitive K+ channel His kinase sensor domain BJAB0715_02521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02522 PF13936 Helix-turn-helix domain BJAB0715_02522 PF00665 Integrase core domain BJAB0715_02523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02523 PF13492 GAF domain BJAB0715_02523 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02523 PF13493 Domain of unknown function (DUF4118) BJAB0715_02523 PF02702 Osmosensitive K+ channel His kinase sensor domain BJAB0715_02524 PF02669 K+-transporting ATPase, c chain BJAB0715_02526 PF03814 Potassium-transporting ATPase A subunit BJAB0715_02529 PF03109 ABC1 family BJAB0715_02530 PF00899 ThiF family BJAB0715_02531 PF01613 Flavin reductase like domain BJAB0715_02532 PF00501 AMP-binding enzyme BJAB0715_02532 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_02533 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_02533 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02533 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_02534 PF00106 short chain dehydrogenase BJAB0715_02535 PF12833 Helix-turn-helix domain BJAB0715_02536 PF17827 PrmC N-terminal domain BJAB0715_02536 PF13847 Methyltransferase domain BJAB0715_02537 PF03462 PCRF domain BJAB0715_02537 PF00472 RF-1 domain BJAB0715_02539 PF03466 LysR substrate binding domain BJAB0715_02539 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02542 PF00296 Luciferase-like monooxygenase BJAB0715_02544 PF13994 PgaD-like protein BJAB0715_02545 PF00535 Glycosyl transferase family 2 BJAB0715_02546 PF01522 Polysaccharide deacetylase BJAB0715_02546 PF14883 Hypothetical glycosyl hydrolase family 13 BJAB0715_02548 PF03618 Kinase/pyrophosphorylase BJAB0715_02549 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BJAB0715_02549 PF02896 PEP-utilising enzyme, TIM barrel domain BJAB0715_02549 PF00391 PEP-utilising enzyme, mobile domain BJAB0715_02551 PF06481 COX Aromatic Rich Motif BJAB0715_02551 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BJAB0715_02552 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJAB0715_02553 PF00510 Cytochrome c oxidase subunit III BJAB0715_02554 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BJAB0715_02555 PF01040 UbiA prenyltransferase family BJAB0715_02556 PF01250 Ribosomal protein S6 BJAB0715_02557 PF01084 Ribosomal protein S18 BJAB0715_02558 PF03948 Ribosomal protein L9, C-terminal domain BJAB0715_02558 PF01281 Ribosomal protein L9, N-terminal domain BJAB0715_02559 PF00772 DnaB-like helicase N terminal domain BJAB0715_02559 PF03796 DnaB-like helicase C terminal domain BJAB0715_02560 PF00842 Alanine racemase, C-terminal domain BJAB0715_02560 PF01168 Alanine racemase, N-terminal domain BJAB0715_02562 PF01841 Transglutaminase-like superfamily BJAB0715_02562 PF08379 Bacterial transglutaminase-like N-terminal region BJAB0715_02564 PF14403 Circularly permuted ATP-grasp type 2 BJAB0715_02566 PF01134 Glucose inhibited division protein A BJAB0715_02566 PF13932 GidA associated domain BJAB0715_02570 PF02954 Bacterial regulatory protein, Fis family BJAB0715_02571 PF01808 AICARFT/IMPCHase bienzyme BJAB0715_02571 PF02142 MGS-like domain BJAB0715_02572 PF02844 Phosphoribosylglycinamide synthetase, N domain BJAB0715_02572 PF02843 Phosphoribosylglycinamide synthetase, C domain BJAB0715_02572 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BJAB0715_02573 PF03180 NLPA lipoprotein BJAB0715_02574 PF00005 ABC transporter BJAB0715_02574 PF09383 NIL domain BJAB0715_02575 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02576 PF16123 Hydroxyacylglutathione hydrolase C-terminus BJAB0715_02576 PF00753 Metallo-beta-lactamase superfamily BJAB0715_02578 PF00375 Sodium:dicarboxylate symporter family BJAB0715_02582 PF07995 Glucose / Sorbosone dehydrogenase BJAB0715_02583 PF00892 EamA-like transporter family BJAB0715_02584 PF01177 Asp/Glu/Hydantoin racemase BJAB0715_02588 PF00072 Response regulator receiver domain BJAB0715_02588 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_02589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02589 PF08521 Two-component sensor kinase N-terminal BJAB0715_02589 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02597 PF00672 HAMP domain BJAB0715_02597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02597 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02598 PF00072 Response regulator receiver domain BJAB0715_02598 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_02600 PF00576 HIUase/Transthyretin family BJAB0715_02602 PF02470 MlaD protein BJAB0715_02603 PF04403 Paraquat-inducible protein A BJAB0715_02606 PF13936 Helix-turn-helix domain BJAB0715_02606 PF00665 Integrase core domain BJAB0715_02609 PF00083 Sugar (and other) transporter BJAB0715_02609 PF08946 Osmosensory transporter coiled coil BJAB0715_02619 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_02619 PF07729 FCD domain BJAB0715_02621 PF03616 Sodium/glutamate symporter BJAB0715_02622 PF00561 alpha/beta hydrolase fold BJAB0715_02627 PF04076 Bacterial OB fold (BOF) protein BJAB0715_02633 PF00324 Amino acid permease BJAB0715_02634 PF00171 Aldehyde dehydrogenase family BJAB0715_02635 PF00202 Aminotransferase class-III BJAB0715_02636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02636 PF03466 LysR substrate binding domain BJAB0715_02637 PF00069 Protein kinase domain BJAB0715_02641 PF00814 Glycoprotease family BJAB0715_02642 PF01165 Ribosomal protein S21 BJAB0715_02643 PF09424 Yqey-like protein BJAB0715_02644 PF01435 Peptidase family M48 BJAB0715_02645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJAB0715_02645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJAB0715_02648 PF00156 Phosphoribosyl transferase domain BJAB0715_02650 PF01180 Dihydroorotate dehydrogenase BJAB0715_02654 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BJAB0715_02654 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BJAB0715_02655 PF00881 Nitroreductase family BJAB0715_02657 PF00270 DEAD/DEAH box helicase BJAB0715_02657 PF00271 Helicase conserved C-terminal domain BJAB0715_02658 PF00313 'Cold-shock' DNA-binding domain BJAB0715_02660 PF00140 Sigma-70 factor, region 1.2 BJAB0715_02660 PF04545 Sigma-70, region 4 BJAB0715_02660 PF04542 Sigma-70 region 2 BJAB0715_02661 PF04241 Protein of unknown function (DUF423) BJAB0715_02663 PF05690 Thiazole biosynthesis protein ThiG BJAB0715_02665 PF03883 Peroxide stress protein YaaA BJAB0715_02667 PF00158 Sigma-54 interaction domain BJAB0715_02667 PF06956 Regulator of RNA terminal phosphate cyclase BJAB0715_02668 PF00753 Metallo-beta-lactamase superfamily BJAB0715_02669 PF01139 tRNA-splicing ligase RtcB BJAB0715_02672 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain BJAB0715_02672 PF01137 RNA 3'-terminal phosphate cyclase BJAB0715_02673 PF07687 Peptidase dimerisation domain BJAB0715_02673 PF01546 Peptidase family M20/M25/M40 BJAB0715_02675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJAB0715_02676 PF00800 Prephenate dehydratase BJAB0715_02676 PF01817 Chorismate mutase type II BJAB0715_02676 PF01842 ACT domain BJAB0715_02678 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_02678 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02678 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_02679 PF00375 Sodium:dicarboxylate symporter family BJAB0715_02680 PF02885 Glycosyl transferase family, helical bundle domain BJAB0715_02680 PF00591 Glycosyl transferase family, a/b domain BJAB0715_02681 PF07023 Protein of unknown function (DUF1315) BJAB0715_02682 PF01513 ATP-NAD kinase BJAB0715_02683 PF14814 Bifunctional transglycosylase second domain BJAB0715_02683 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_02683 PF00912 Transglycosylase BJAB0715_02685 PF00293 NUDIX domain BJAB0715_02687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_02687 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_02687 PF08521 Two-component sensor kinase N-terminal BJAB0715_02688 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_02688 PF00072 Response regulator receiver domain BJAB0715_02692 PF00437 Type II/IV secretion system protein BJAB0715_02694 PF18389 TrmO C-terminal domain BJAB0715_02694 PF01980 tRNA-methyltransferase O BJAB0715_02695 PF00175 Oxidoreductase NAD-binding domain BJAB0715_02695 PF00970 Oxidoreductase FAD-binding domain BJAB0715_02696 PF02567 Phenazine biosynthesis-like protein BJAB0715_02697 PF00155 Aminotransferase class I and II BJAB0715_02697 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_02699 PF12838 4Fe-4S dicluster domain BJAB0715_02700 PF00893 Small Multidrug Resistance protein BJAB0715_02701 PF00005 ABC transporter BJAB0715_02702 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02703 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02704 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJAB0715_02705 PF03466 LysR substrate binding domain BJAB0715_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02706 PF13533 Biotin-lipoyl like BJAB0715_02707 PF00873 AcrB/AcrD/AcrF family BJAB0715_02708 PF02321 Outer membrane efflux protein BJAB0715_02709 PF00464 Serine hydroxymethyltransferase BJAB0715_02710 PF00464 Serine hydroxymethyltransferase BJAB0715_02715 PF00005 ABC transporter BJAB0715_02716 PF01061 ABC-2 type transporter BJAB0715_02717 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BJAB0715_02717 PF14489 QueF-like protein BJAB0715_02719 PF01098 Cell cycle protein BJAB0715_02720 PF13406 Transglycosylase SLT domain BJAB0715_02721 PF05036 Sporulation related domain BJAB0715_02721 PF03330 Lytic transglycolase BJAB0715_02725 PF12833 Helix-turn-helix domain BJAB0715_02727 PF00889 Elongation factor TS BJAB0715_02728 PF00318 Ribosomal protein S2 BJAB0715_02729 PF00557 Metallopeptidase family M24 BJAB0715_02731 PF07690 Major Facilitator Superfamily BJAB0715_02735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJAB0715_02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02736 PF04055 Radical SAM superfamily BJAB0715_02737 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_02737 PF09317 Domain of unknown function (DUF1974) BJAB0715_02737 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_02740 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BJAB0715_02740 PF05221 S-adenosyl-L-homocysteine hydrolase BJAB0715_02741 PF02219 Methylenetetrahydrofolate reductase BJAB0715_02742 PF04452 RNA methyltransferase BJAB0715_02745 PF03707 Bacterial signalling protein N terminal repeat BJAB0715_02745 PF00563 EAL domain BJAB0715_02745 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_02746 PF01515 Phosphate acetyl/butaryl transferase BJAB0715_02746 PF03949 Malic enzyme, NAD binding domain BJAB0715_02746 PF00390 Malic enzyme, N-terminal domain BJAB0715_02747 PF01743 Poly A polymerase head domain BJAB0715_02747 PF12627 Probable RNA and SrmB- binding site of polymerase A BJAB0715_02748 PF13180 PDZ domain BJAB0715_02749 PF01784 NIF3 (NGG1p interacting factor 3) BJAB0715_02750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJAB0715_02750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJAB0715_02754 PF01040 UbiA prenyltransferase family BJAB0715_02755 PF04345 Chorismate lyase BJAB0715_02757 PF00854 POT family BJAB0715_02760 PF00117 Glutamine amidotransferase class-I BJAB0715_02761 PF11838 ERAP1-like C-terminal domain BJAB0715_02761 PF01433 Peptidase family M1 domain BJAB0715_02762 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_02762 PF00593 TonB dependent receptor BJAB0715_02763 PF00591 Glycosyl transferase family, a/b domain BJAB0715_02763 PF02885 Glycosyl transferase family, helical bundle domain BJAB0715_02764 PF00218 Indole-3-glycerol phosphate synthase BJAB0715_02767 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJAB0715_02767 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJAB0715_02768 PF01799 [2Fe-2S] binding domain BJAB0715_02768 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_02770 PF00144 Beta-lactamase BJAB0715_02773 PF05675 Protein of unknown function (DUF817) BJAB0715_02774 PF01208 Uroporphyrinogen decarboxylase (URO-D) BJAB0715_02776 PF00425 chorismate binding enzyme BJAB0715_02778 PF00975 Thioesterase domain BJAB0715_02779 PF00664 ABC transporter transmembrane region BJAB0715_02779 PF00005 ABC transporter BJAB0715_02780 PF00664 ABC transporter transmembrane region BJAB0715_02780 PF00005 ABC transporter BJAB0715_02782 PF00282 Pyridoxal-dependent decarboxylase conserved domain BJAB0715_02783 PF00857 Isochorismatase family BJAB0715_02783 PF00550 Phosphopantetheine attachment site BJAB0715_02784 PF00501 AMP-binding enzyme BJAB0715_02784 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_02785 PF00550 Phosphopantetheine attachment site BJAB0715_02785 PF00668 Condensation domain BJAB0715_02785 PF00501 AMP-binding enzyme BJAB0715_02786 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BJAB0715_02787 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_02787 PF00593 TonB dependent receptor BJAB0715_02788 PF01497 Periplasmic binding protein BJAB0715_02789 PF00005 ABC transporter BJAB0715_02790 PF01032 FecCD transport family BJAB0715_02791 PF01032 FecCD transport family BJAB0715_02793 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_02793 PF00975 Thioesterase domain BJAB0715_02793 PF00550 Phosphopantetheine attachment site BJAB0715_02793 PF00501 AMP-binding enzyme BJAB0715_02793 PF00668 Condensation domain BJAB0715_02794 PF00501 AMP-binding enzyme BJAB0715_02794 PF00668 Condensation domain BJAB0715_02794 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_02794 PF00550 Phosphopantetheine attachment site BJAB0715_02796 PF08348 YheO-like PAS domain BJAB0715_02796 PF13309 HTH domain BJAB0715_02797 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_02799 PF17954 Quercetinase C-terminal cupin domain BJAB0715_02799 PF02678 Pirin BJAB0715_02806 PF04328 Selenoprotein, putative BJAB0715_02807 PF13722 5TM C-terminal transporter carbon starvation CstA BJAB0715_02807 PF02554 Carbon starvation protein CstA BJAB0715_02808 PF09285 Elongation factor P, C-terminal BJAB0715_02808 PF08207 Elongation factor P (EF-P) KOW-like domain BJAB0715_02808 PF01132 Elongation factor P (EF-P) OB domain BJAB0715_02809 PF04055 Radical SAM superfamily BJAB0715_02811 PF00563 EAL domain BJAB0715_02811 PF12792 CSS motif domain associated with EAL BJAB0715_02812 PF01197 Ribosomal protein L31 BJAB0715_02813 PF13593 SBF-like CPA transporter family (DUF4137) BJAB0715_02814 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJAB0715_02815 PF07690 Major Facilitator Superfamily BJAB0715_02817 PF05362 Lon protease (S16) C-terminal proteolytic domain BJAB0715_02817 PF13654 AAA domain BJAB0715_02818 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02818 PF03466 LysR substrate binding domain BJAB0715_02819 PF01551 Peptidase family M23 BJAB0715_02819 PF01476 LysM domain BJAB0715_02820 PF01975 Survival protein SurE BJAB0715_02823 PF07943 Penicillin-binding protein 5, C-terminal domain BJAB0715_02823 PF00768 D-alanyl-D-alanine carboxypeptidase BJAB0715_02824 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_02825 PF13344 Haloacid dehalogenase-like hydrolase BJAB0715_02825 PF00293 NUDIX domain BJAB0715_02827 PF04356 Protein of unknown function (DUF489) BJAB0715_02828 PF00206 Lyase BJAB0715_02828 PF08328 Adenylosuccinate lyase C-terminal BJAB0715_02831 PF01343 Peptidase family S49 BJAB0715_02831 PF08496 Peptidase family S49 N-terminal BJAB0715_02832 PF00005 ABC transporter BJAB0715_02833 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02834 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02835 PF12849 PBP superfamily domain BJAB0715_02836 PF00324 Amino acid permease BJAB0715_02837 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJAB0715_02837 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJAB0715_02837 PF00205 Thiamine pyrophosphate enzyme, central domain BJAB0715_02838 PF01037 Lrp/AsnC ligand binding domain BJAB0715_02839 PF00171 Aldehyde dehydrogenase family BJAB0715_02840 PF00282 Pyridoxal-dependent decarboxylase conserved domain BJAB0715_02841 PF00202 Aminotransferase class-III BJAB0715_02843 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02843 PF17754 MftR C-terminal domain BJAB0715_02845 PF00487 Fatty acid desaturase BJAB0715_02846 PF00970 Oxidoreductase FAD-binding domain BJAB0715_02846 PF00175 Oxidoreductase NAD-binding domain BJAB0715_02846 PF00111 2Fe-2S iron-sulfur cluster binding domain BJAB0715_02847 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02849 PF18337 RapA N-terminal Tudor like domain BJAB0715_02849 PF18339 RapA N-terminal Tudor like domain 1 BJAB0715_02849 PF00176 SNF2 family N-terminal domain BJAB0715_02849 PF12137 RNA polymerase recycling family C-terminal BJAB0715_02849 PF00271 Helicase conserved C-terminal domain BJAB0715_02850 PF00849 RNA pseudouridylate synthase BJAB0715_02852 PF00202 Aminotransferase class-III BJAB0715_02853 PF02581 Thiamine monophosphate synthase BJAB0715_02859 PF00675 Insulinase (Peptidase family M16) BJAB0715_02859 PF05193 Peptidase M16 inactive domain BJAB0715_02860 PF02567 Phenazine biosynthesis-like protein BJAB0715_02862 PF03466 LysR substrate binding domain BJAB0715_02862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02863 PF06779 Uncharacterised MFS-type transporter YbfB BJAB0715_02867 PF00180 Isocitrate/isopropylmalate dehydrogenase BJAB0715_02869 PF00849 RNA pseudouridylate synthase BJAB0715_02870 PF03971 Monomeric isocitrate dehydrogenase BJAB0715_02872 PF00768 D-alanyl-D-alanine carboxypeptidase BJAB0715_02872 PF07943 Penicillin-binding protein 5, C-terminal domain BJAB0715_02873 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_02874 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJAB0715_02875 PF03441 FAD binding domain of DNA photolyase BJAB0715_02875 PF00875 DNA photolyase BJAB0715_02879 PF00665 Integrase core domain BJAB0715_02879 PF13936 Helix-turn-helix domain BJAB0715_02881 PF00665 Integrase core domain BJAB0715_02885 PF00809 Pterin binding enzyme BJAB0715_02886 PF07690 Major Facilitator Superfamily BJAB0715_02887 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_02887 PF02909 Tetracyclin repressor-like, C-terminal domain BJAB0715_02890 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BJAB0715_02891 PF01636 Phosphotransferase enzyme family BJAB0715_02895 PF02350 UDP-N-acetylglucosamine 2-epimerase BJAB0715_02898 PF03060 Nitronate monooxygenase BJAB0715_02899 PF01207 Dihydrouridine synthase (Dus) BJAB0715_02900 PF07759 Protein of unknown function (DUF1615) BJAB0715_02902 PF01472 PUA domain BJAB0715_02902 PF00696 Amino acid kinase family BJAB0715_02903 PF01018 GTP1/OBG BJAB0715_02903 PF01926 50S ribosome-binding GTPase BJAB0715_02906 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJAB0715_02906 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJAB0715_02907 PF00892 EamA-like transporter family BJAB0715_02909 PF00271 Helicase conserved C-terminal domain BJAB0715_02909 PF17757 UvrB interaction domain BJAB0715_02909 PF04851 Type III restriction enzyme, res subunit BJAB0715_02909 PF12344 Ultra-violet resistance protein B BJAB0715_02909 PF02151 UvrB/uvrC motif BJAB0715_02911 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_02911 PF17151 Periplasmic sensor domain BJAB0715_02915 PF00012 Hsp70 protein BJAB0715_02919 PF00106 short chain dehydrogenase BJAB0715_02920 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BJAB0715_02921 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BJAB0715_02922 PF11967 Recombination protein O N terminal BJAB0715_02922 PF02565 Recombination protein O C terminal BJAB0715_02924 PF01926 50S ribosome-binding GTPase BJAB0715_02924 PF07650 KH domain BJAB0715_02925 PF14622 Ribonuclease-III-like BJAB0715_02925 PF00035 Double-stranded RNA binding motif BJAB0715_02927 PF10502 Signal peptidase, peptidase S26 BJAB0715_02928 PF00679 Elongation factor G C-terminus BJAB0715_02928 PF03144 Elongation factor Tu domain 2 BJAB0715_02928 PF00009 Elongation factor Tu GTP binding domain BJAB0715_02928 PF06421 GTP-binding protein LepA C-terminus BJAB0715_02930 PF13180 PDZ domain BJAB0715_02931 PF02910 Fumarate reductase flavoprotein C-term BJAB0715_02931 PF00890 FAD binding domain BJAB0715_02933 PF02223 Thymidylate kinase BJAB0715_02934 PF02618 YceG-like family BJAB0715_02935 PF01063 Amino-transferase class IV BJAB0715_02939 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02940 PF00528 Binding-protein-dependent transport system inner membrane component BJAB0715_02941 PF00005 ABC transporter BJAB0715_02941 PF12857 TOBE-like domain BJAB0715_02942 PF03466 LysR substrate binding domain BJAB0715_02942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_02944 PF14602 Hexapeptide repeat of succinyl-transferase BJAB0715_02944 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BJAB0715_02944 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_02946 PF06508 Queuosine biosynthesis protein QueC BJAB0715_02949 PF00578 AhpC/TSA family BJAB0715_02951 PF01467 Cytidylyltransferase-like BJAB0715_02951 PF00293 NUDIX domain BJAB0715_02952 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_02953 PF01784 NIF3 (NGG1p interacting factor 3) BJAB0715_02955 PF07690 Major Facilitator Superfamily BJAB0715_02956 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BJAB0715_02956 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BJAB0715_02956 PF02769 AIR synthase related protein, C-terminal domain BJAB0715_02957 PF01966 HD domain BJAB0715_02958 PF01330 RuvA N terminal domain BJAB0715_02958 PF07499 RuvA, C-terminal domain BJAB0715_02959 PF17864 RuvB AAA lid domain BJAB0715_02959 PF05496 Holliday junction DNA helicase RuvB P-loop domain BJAB0715_02959 PF05491 RuvB C-terminal winged helix domain BJAB0715_02960 PF07687 Peptidase dimerisation domain BJAB0715_02960 PF01546 Peptidase family M20/M25/M40 BJAB0715_02961 PF03061 Thioesterase superfamily BJAB0715_02962 PF01618 MotA/TolQ/ExbB proton channel family BJAB0715_02963 PF02472 Biopolymer transport protein ExbD/TolR BJAB0715_02965 PF04052 TolB amino-terminal domain BJAB0715_02965 PF07676 WD40-like Beta Propeller Repeat BJAB0715_02966 PF00691 OmpA family BJAB0715_02968 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BJAB0715_02969 PF00588 SpoU rRNA Methylase family BJAB0715_02969 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJAB0715_02975 PF08299 Bacterial dnaA protein helix-turn-helix BJAB0715_02975 PF00308 Bacterial dnaA protein BJAB0715_02975 PF11638 DnaA N-terminal domain BJAB0715_02976 PF01594 AI-2E family transporter BJAB0715_02977 PF02769 AIR synthase related protein, C-terminal domain BJAB0715_02977 PF00586 AIR synthase related protein, N-terminal domain BJAB0715_02978 PF00551 Formyl transferase BJAB0715_02979 PF12697 Alpha/beta hydrolase family BJAB0715_02980 PF01343 Peptidase family S49 BJAB0715_02980 PF06965 Na+/H+ antiporter 1 BJAB0715_02982 PF03772 Competence protein BJAB0715_02982 PF13567 Domain of unknown function (DUF4131) BJAB0715_02982 PF00753 Metallo-beta-lactamase superfamily BJAB0715_02983 PF00005 ABC transporter BJAB0715_02984 PF02687 FtsX-like permease family BJAB0715_02984 PF12704 MacB-like periplasmic core domain BJAB0715_02986 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BJAB0715_02989 PF00266 Aminotransferase class-V BJAB0715_02991 PF13533 Biotin-lipoyl like BJAB0715_02996 PF00535 Glycosyl transferase family 2 BJAB0715_02999 PF00521 DNA gyrase/topoisomerase IV, subunit A BJAB0715_02999 PF03989 DNA gyrase C-terminal domain, beta-propeller BJAB0715_03000 PF01012 Electron transfer flavoprotein domain BJAB0715_03000 PF00766 Electron transfer flavoprotein FAD-binding domain BJAB0715_03001 PF01012 Electron transfer flavoprotein domain BJAB0715_03002 PF00589 Phage integrase family BJAB0715_03002 PF02899 Phage integrase, N-terminal SAM-like domain BJAB0715_03003 PF01810 LysE type translocator BJAB0715_03004 PF00561 alpha/beta hydrolase fold BJAB0715_03005 PF01678 Diaminopimelate epimerase BJAB0715_03006 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BJAB0715_03006 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJAB0715_03008 PF00324 Amino acid permease BJAB0715_03009 PF01235 Sodium:alanine symporter family BJAB0715_03010 PF18073 Rubredoxin metal binding domain BJAB0715_03012 PF00152 tRNA synthetases class II (D, K and N) BJAB0715_03013 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJAB0715_03013 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJAB0715_03013 PF11890 Domain of unknown function (DUF3410) BJAB0715_03014 PF06803 Protein of unknown function (DUF1232) BJAB0715_03015 PF02634 FdhD/NarQ family BJAB0715_03016 PF00384 Molybdopterin oxidoreductase BJAB0715_03017 PF02595 Glycerate kinase family BJAB0715_03018 PF02595 Glycerate kinase family BJAB0715_03021 PF00881 Nitroreductase family BJAB0715_03026 PF00975 Thioesterase domain BJAB0715_03026 PF00668 Condensation domain BJAB0715_03026 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_03026 PF00501 AMP-binding enzyme BJAB0715_03026 PF00550 Phosphopantetheine attachment site BJAB0715_03028 PF01272 Transcription elongation factor, GreA/GreB, C-term BJAB0715_03028 PF03449 Transcription elongation factor, N-terminal BJAB0715_03029 PF01464 Transglycosylase SLT domain BJAB0715_03029 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJAB0715_03031 PF01171 PP-loop family BJAB0715_03032 PF01464 Transglycosylase SLT domain BJAB0715_03033 PF01435 Peptidase family M48 BJAB0715_03035 PF00873 AcrB/AcrD/AcrF family BJAB0715_03036 PF03009 Glycerophosphoryl diester phosphodiesterase family BJAB0715_03038 PF01219 Prokaryotic diacylglycerol kinase BJAB0715_03039 PF00118 TCP-1/cpn60 chaperonin family BJAB0715_03040 PF00166 Chaperonin 10 Kd subunit BJAB0715_03041 PF00149 Calcineurin-like phosphoesterase BJAB0715_03042 PF00781 Diacylglycerol kinase catalytic domain BJAB0715_03043 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BJAB0715_03043 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BJAB0715_03044 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BJAB0715_03044 PF01266 FAD dependent oxidoreductase BJAB0715_03047 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJAB0715_03047 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJAB0715_03048 PF00083 Sugar (and other) transporter BJAB0715_03051 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BJAB0715_03051 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BJAB0715_03052 PF16655 PhoD-like phosphatase, N-terminal domain BJAB0715_03052 PF09423 PhoD-like phosphatase BJAB0715_03056 PF00809 Pterin binding enzyme BJAB0715_03057 PF06480 FtsH Extracellular BJAB0715_03057 PF17862 AAA+ lid domain BJAB0715_03057 PF01434 Peptidase family M41 BJAB0715_03057 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_03058 PF01728 FtsJ-like methyltransferase BJAB0715_03059 PF01985 CRS1 / YhbY (CRM) domain BJAB0715_03062 PF00117 Glutamine amidotransferase class-I BJAB0715_03062 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BJAB0715_03063 PF02142 MGS-like domain BJAB0715_03063 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_03063 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJAB0715_03064 PF01272 Transcription elongation factor, GreA/GreB, C-term BJAB0715_03064 PF03449 Transcription elongation factor, N-terminal BJAB0715_03065 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_03066 PF01042 Endoribonuclease L-PSP BJAB0715_03067 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_03068 PF00582 Universal stress protein family BJAB0715_03069 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJAB0715_03071 PF09587 Bacterial capsule synthesis protein PGA_cap BJAB0715_03074 PF00999 Sodium/hydrogen exchanger family BJAB0715_03075 PF04228 Putative neutral zinc metallopeptidase BJAB0715_03076 PF05661 Protein of unknown function (DUF808) BJAB0715_03077 PF00579 tRNA synthetases class I (W and Y) BJAB0715_03078 PF00579 tRNA synthetases class I (W and Y) BJAB0715_03079 PF02629 CoA binding domain BJAB0715_03079 PF00549 CoA-ligase BJAB0715_03080 PF00549 CoA-ligase BJAB0715_03080 PF08442 ATP-grasp domain BJAB0715_03081 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_03081 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJAB0715_03082 PF02817 e3 binding domain BJAB0715_03082 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJAB0715_03082 PF00364 Biotin-requiring enzyme BJAB0715_03083 PF00676 Dehydrogenase E1 component BJAB0715_03083 PF16870 2-oxoglutarate dehydrogenase C-terminal BJAB0715_03083 PF02779 Transketolase, pyrimidine binding domain BJAB0715_03083 PF16078 2-oxoglutarate dehydrogenase N-terminus BJAB0715_03085 PF13085 2Fe-2S iron-sulfur cluster binding domain BJAB0715_03086 PF00890 FAD binding domain BJAB0715_03086 PF02910 Fumarate reductase flavoprotein C-term BJAB0715_03087 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJAB0715_03088 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJAB0715_03089 PF00285 Citrate synthase, C-terminal domain BJAB0715_03095 PF04545 Sigma-70, region 4 BJAB0715_03095 PF04539 Sigma-70 region 3 BJAB0715_03095 PF04542 Sigma-70 region 2 BJAB0715_03095 PF03979 Sigma-70 factor, region 1.1 BJAB0715_03095 PF04546 Sigma-70, non-essential region BJAB0715_03095 PF00140 Sigma-70 factor, region 1.2 BJAB0715_03096 PF04359 Protein of unknown function (DUF493) BJAB0715_03097 PF03099 Biotin/lipoate A/B protein ligase family BJAB0715_03099 PF00465 Iron-containing alcohol dehydrogenase BJAB0715_03100 PF13520 Amino acid permease BJAB0715_03101 PF03358 NADPH-dependent FMN reductase BJAB0715_03103 PF00588 SpoU rRNA Methylase family BJAB0715_03104 PF14824 Sirohaem biosynthesis protein central BJAB0715_03104 PF10414 Sirohaem synthase dimerisation region BJAB0715_03104 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJAB0715_03105 PF02403 Seryl-tRNA synthetase N-terminal domain BJAB0715_03105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJAB0715_03107 PF03548 Outer membrane lipoprotein carrier protein LolA BJAB0715_03108 PF01016 Ribosomal L27 protein BJAB0715_03109 PF00829 Ribosomal prokaryotic L21 protein BJAB0715_03110 PF00348 Polyprenyl synthetase BJAB0715_03113 PF01569 PAP2 superfamily BJAB0715_03114 PF00529 HlyD membrane-fusion protein of T1SS BJAB0715_03114 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_03115 PF00873 AcrB/AcrD/AcrF family BJAB0715_03116 PF02321 Outer membrane efflux protein BJAB0715_03117 PF01906 Putative heavy-metal-binding BJAB0715_03118 PF01906 Putative heavy-metal-binding BJAB0715_03122 PF10458 Valyl tRNA synthetase tRNA binding arm BJAB0715_03122 PF00133 tRNA synthetases class I (I, L, M and V) BJAB0715_03122 PF08264 Anticodon-binding domain of tRNA BJAB0715_03123 PF13649 Methyltransferase domain BJAB0715_03126 PF03466 LysR substrate binding domain BJAB0715_03126 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03127 PF00909 Ammonium Transporter Family BJAB0715_03129 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03129 PF08521 Two-component sensor kinase N-terminal BJAB0715_03129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03130 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_03130 PF00072 Response regulator receiver domain BJAB0715_03131 PF00884 Sulfatase BJAB0715_03131 PF08019 Phosphoethanolamine transferase EptA/EptB BJAB0715_03136 PF01734 Patatin-like phospholipase BJAB0715_03138 PF01145 SPFH domain / Band 7 family BJAB0715_03139 PF04237 YjbR BJAB0715_03140 PF00348 Polyprenyl synthetase BJAB0715_03141 PF04303 PrpF protein BJAB0715_03143 PF00324 Amino acid permease BJAB0715_03144 PF13356 Arm DNA-binding domain BJAB0715_03144 PF00589 Phage integrase family BJAB0715_03151 PF03796 DnaB-like helicase C terminal domain BJAB0715_03151 PF00772 DnaB-like helicase N terminal domain BJAB0715_03166 PF01965 DJ-1/PfpI family BJAB0715_03167 PF08659 KR domain BJAB0715_03167 PF08990 Erythronolide synthase docking BJAB0715_03167 PF09277 Erythronolide synthase, docking BJAB0715_03167 PF16197 Ketoacyl-synthetase C-terminal extension BJAB0715_03167 PF14765 Polyketide synthase dehydratase BJAB0715_03167 PF00109 Beta-ketoacyl synthase, N-terminal domain BJAB0715_03167 PF02801 Beta-ketoacyl synthase, C-terminal domain BJAB0715_03167 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_03167 PF00698 Acyl transferase domain BJAB0715_03167 PF00550 Phosphopantetheine attachment site BJAB0715_03168 PF06719 AraC-type transcriptional regulator N-terminus BJAB0715_03168 PF12833 Helix-turn-helix domain BJAB0715_03169 PF02673 Bacitracin resistance protein BacA BJAB0715_03173 PF02525 Flavodoxin-like fold BJAB0715_03176 PF01507 Phosphoadenosine phosphosulfate reductase family BJAB0715_03177 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BJAB0715_03177 PF06974 Protein of unknown function (DUF1298) BJAB0715_03179 PF10150 Ribonuclease E/G family BJAB0715_03179 PF00575 S1 RNA binding domain BJAB0715_03180 PF02545 Maf-like protein BJAB0715_03182 PF04085 rod shape-determining protein MreC BJAB0715_03184 PF02686 Glu-tRNAGln amidotransferase C subunit BJAB0715_03185 PF01425 Amidase BJAB0715_03186 PF02637 GatB domain BJAB0715_03186 PF02934 GatB/GatE catalytic domain BJAB0715_03191 PF05649 Peptidase family M13 BJAB0715_03191 PF01431 Peptidase family M13 BJAB0715_03192 PF05992 SbmA/BacA-like family BJAB0715_03193 PF13291 ACT domain BJAB0715_03193 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_03194 PF01734 Patatin-like phospholipase BJAB0715_03195 PF01235 Sodium:alanine symporter family BJAB0715_03198 PF00881 Nitroreductase family BJAB0715_03199 PF07690 Major Facilitator Superfamily BJAB0715_03200 PF12805 FUSC-like inner membrane protein yccS BJAB0715_03202 PF00175 Oxidoreductase NAD-binding domain BJAB0715_03202 PF00667 FAD binding domain BJAB0715_03202 PF00258 Flavodoxin BJAB0715_03204 PF03734 L,D-transpeptidase catalytic domain BJAB0715_03204 PF17969 L,D-transpeptidase C-terminal domain BJAB0715_03205 PF04304 Protein of unknown function (DUF454) BJAB0715_03207 PF08085 Entericidin EcnA/B family BJAB0715_03208 PF01546 Peptidase family M20/M25/M40 BJAB0715_03208 PF07687 Peptidase dimerisation domain BJAB0715_03210 PF01627 Hpt domain BJAB0715_03210 PF00072 Response regulator receiver domain BJAB0715_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03210 PF01584 CheW-like domain BJAB0715_03211 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJAB0715_03211 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BJAB0715_03212 PF01584 CheW-like domain BJAB0715_03213 PF00072 Response regulator receiver domain BJAB0715_03214 PF00072 Response regulator receiver domain BJAB0715_03217 PF00873 AcrB/AcrD/AcrF family BJAB0715_03218 PF03129 Anticodon binding domain BJAB0715_03218 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJAB0715_03218 PF04073 Aminoacyl-tRNA editing domain BJAB0715_03219 PF07411 Domain of unknown function (DUF1508) BJAB0715_03220 PF08274 PhnA Zinc-Ribbon BJAB0715_03220 PF03831 PhnA domain BJAB0715_03221 PF04343 Protein of unknown function, DUF488 BJAB0715_03223 PF01571 Aminomethyltransferase folate-binding domain BJAB0715_03224 PF13098 Thioredoxin-like domain BJAB0715_03224 PF10411 Disulfide bond isomerase protein N-terminus BJAB0715_03227 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_03228 PF00593 TonB dependent receptor BJAB0715_03228 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_03229 PF02245 Methylpurine-DNA glycosylase (MPG) BJAB0715_03230 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJAB0715_03230 PF06827 Zinc finger found in FPG and IleRS BJAB0715_03230 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJAB0715_03233 PF01741 Large-conductance mechanosensitive channel, MscL BJAB0715_03235 PF00860 Permease family BJAB0715_03236 PF05175 Methyltransferase small domain BJAB0715_03236 PF08468 Methyltransferase small domain N-terminal BJAB0715_03237 PF00324 Amino acid permease BJAB0715_03238 PF01139 tRNA-splicing ligase RtcB BJAB0715_03240 PF13505 Outer membrane protein beta-barrel domain BJAB0715_03240 PF00691 OmpA family BJAB0715_03242 PF02803 Thiolase, C-terminal domain BJAB0715_03242 PF00108 Thiolase, N-terminal domain BJAB0715_03244 PF00893 Small Multidrug Resistance protein BJAB0715_03246 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJAB0715_03246 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJAB0715_03247 PF01011 PQQ enzyme repeat BJAB0715_03249 PF04966 Carbohydrate-selective porin, OprB family BJAB0715_03250 PF02515 CoA-transferase family III BJAB0715_03251 PF12833 Helix-turn-helix domain BJAB0715_03251 PF02311 AraC-like ligand binding domain BJAB0715_03252 PF00108 Thiolase, N-terminal domain BJAB0715_03252 PF02803 Thiolase, C-terminal domain BJAB0715_03253 PF00378 Enoyl-CoA hydratase/isomerase BJAB0715_03253 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJAB0715_03253 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJAB0715_03258 PF03006 Haemolysin-III related BJAB0715_03259 PF00083 Sugar (and other) transporter BJAB0715_03259 PF07690 Major Facilitator Superfamily BJAB0715_03261 PF02810 SEC-C motif BJAB0715_03261 PF01043 SecA preprotein cross-linking domain BJAB0715_03261 PF07516 SecA Wing and Scaffold domain BJAB0715_03261 PF07517 SecA DEAD-like domain BJAB0715_03262 PF00578 AhpC/TSA family BJAB0715_03262 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJAB0715_03263 PF00753 Metallo-beta-lactamase superfamily BJAB0715_03266 PF08245 Mur ligase middle domain BJAB0715_03266 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_03267 PF01039 Carboxyl transferase domain BJAB0715_03268 PF00290 Tryptophan synthase alpha chain BJAB0715_03274 PF00291 Pyridoxal-phosphate dependent enzyme BJAB0715_03275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BJAB0715_03276 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_03276 PF00593 TonB dependent receptor BJAB0715_03277 PF01923 Cobalamin adenosyltransferase BJAB0715_03278 PF03009 Glycerophosphoryl diester phosphodiesterase family BJAB0715_03281 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BJAB0715_03282 PF00072 Response regulator receiver domain BJAB0715_03282 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_03283 PF00672 HAMP domain BJAB0715_03283 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03285 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJAB0715_03285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03285 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03286 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJAB0715_03286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03286 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03287 PF06146 Phosphate-starvation-inducible E BJAB0715_03291 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_03291 PF00593 TonB dependent receptor BJAB0715_03294 PF02938 GAD domain BJAB0715_03294 PF00152 tRNA synthetases class II (D, K and N) BJAB0715_03294 PF01336 OB-fold nucleic acid binding domain BJAB0715_03297 PF02350 UDP-N-acetylglucosamine 2-epimerase BJAB0715_03298 PF01527 Transposase BJAB0715_03299 PF13683 Integrase core domain BJAB0715_03299 PF13276 HTH-like domain BJAB0715_03302 PF13439 Glycosyltransferase Family 4 BJAB0715_03302 PF00534 Glycosyl transferases group 1 BJAB0715_03303 PF00535 Glycosyl transferase family 2 BJAB0715_03304 PF01522 Polysaccharide deacetylase BJAB0715_03307 PF01063 Amino-transferase class IV BJAB0715_03308 PF03710 Glutamate-ammonia ligase adenylyltransferase BJAB0715_03308 PF08335 GlnD PII-uridylyltransferase BJAB0715_03309 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03309 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03309 PF07689 KaiB domain BJAB0715_03310 PF02547 Queuosine biosynthesis protein BJAB0715_03314 PF01702 Queuine tRNA-ribosyltransferase BJAB0715_03315 PF02699 Preprotein translocase subunit BJAB0715_03316 PF07549 SecD/SecF GG Motif BJAB0715_03316 PF13721 SecD export protein N-terminal TM region BJAB0715_03316 PF02355 Protein export membrane protein BJAB0715_03317 PF02355 Protein export membrane protein BJAB0715_03317 PF07549 SecD/SecF GG Motif BJAB0715_03318 PF02441 Flavoprotein BJAB0715_03318 PF04127 DNA / pantothenate metabolism flavoprotein BJAB0715_03319 PF04002 RadC-like JAB domain BJAB0715_03321 PF01062 Bestrophin, RFP-TM, chloride channel BJAB0715_03322 PF02811 PHP domain BJAB0715_03323 PF04279 Intracellular septation protein A BJAB0715_03324 PF03795 YCII-related domain BJAB0715_03326 PF01266 FAD dependent oxidoreductase BJAB0715_03326 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BJAB0715_03328 PF04461 Protein of unknown function (DUF520) BJAB0715_03330 PF03061 Thioesterase superfamily BJAB0715_03331 PF00085 Thioredoxin BJAB0715_03332 PF00561 alpha/beta hydrolase fold BJAB0715_03333 PF00753 Metallo-beta-lactamase superfamily BJAB0715_03333 PF04273 Putative phosphatase (DUF442) BJAB0715_03335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJAB0715_03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_03339 PF17152 Periplasmic sensor domain BJAB0715_03339 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_03340 PF00691 OmpA family BJAB0715_03340 PF01389 OmpA-like transmembrane domain BJAB0715_03341 PF10518 TAT (twin-arginine translocation) pathway signal sequence BJAB0715_03341 PF00149 Calcineurin-like phosphoesterase BJAB0715_03342 PF13091 PLD-like domain BJAB0715_03344 PF01926 50S ribosome-binding GTPase BJAB0715_03344 PF13167 GTP-binding GTPase N-terminal BJAB0715_03344 PF16360 GTP-binding GTPase Middle Region BJAB0715_03348 PF00149 Calcineurin-like phosphoesterase BJAB0715_03349 PF00398 Ribosomal RNA adenine dimethylase BJAB0715_03350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BJAB0715_03351 PF00572 Ribosomal protein L13 BJAB0715_03352 PF00380 Ribosomal protein S9/S16 BJAB0715_03353 PF00043 Glutathione S-transferase, C-terminal domain BJAB0715_03353 PF13417 Glutathione S-transferase, N-terminal domain BJAB0715_03354 PF04386 Stringent starvation protein B BJAB0715_03356 PF00289 Biotin carboxylase, N-terminal domain BJAB0715_03356 PF00364 Biotin-requiring enzyme BJAB0715_03356 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJAB0715_03356 PF02785 Biotin carboxylase C-terminal domain BJAB0715_03358 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03358 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03358 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03359 PF01039 Carboxyl transferase domain BJAB0715_03363 PF17932 Tetracyclin repressor-like, C-terminal domain BJAB0715_03363 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_03364 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03364 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03364 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03370 PF01066 CDP-alcohol phosphatidyltransferase BJAB0715_03371 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BJAB0715_03375 PF00056 lactate/malate dehydrogenase, NAD binding domain BJAB0715_03375 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BJAB0715_03377 PF01551 Peptidase family M23 BJAB0715_03377 PF10145 Phage-related minor tail protein BJAB0715_03377 PF01464 Transglycosylase SLT domain BJAB0715_03378 PF04055 Radical SAM superfamily BJAB0715_03378 PF01938 TRAM domain BJAB0715_03378 PF00919 Uncharacterized protein family UPF0004 BJAB0715_03379 PF02562 PhoH-like protein BJAB0715_03380 PF02130 Uncharacterized protein family UPF0054 BJAB0715_03385 PF03358 NADPH-dependent FMN reductase BJAB0715_03386 PF03631 Virulence factor BrkB BJAB0715_03387 PF00892 EamA-like transporter family BJAB0715_03388 PF12833 Helix-turn-helix domain BJAB0715_03389 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJAB0715_03395 PF17876 Cold shock domain BJAB0715_03395 PF00575 S1 RNA binding domain BJAB0715_03395 PF08206 Ribonuclease B OB domain BJAB0715_03395 PF00773 RNB domain BJAB0715_03395 PF08461 Ribonuclease R winged-helix domain BJAB0715_03396 PF01432 Peptidase family M3 BJAB0715_03397 PF09526 Probable metal-binding protein (DUF2387) BJAB0715_03403 PF03937 Flavinator of succinate dehydrogenase BJAB0715_03404 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03404 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03404 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03405 PF00743 Flavin-binding monooxygenase-like BJAB0715_03406 PF01196 Ribosomal protein L17 BJAB0715_03407 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BJAB0715_03407 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BJAB0715_03407 PF01000 RNA polymerase Rpb3/RpoA insert domain BJAB0715_03408 PF01479 S4 domain BJAB0715_03408 PF00163 Ribosomal protein S4/S9 N-terminal domain BJAB0715_03409 PF00411 Ribosomal protein S11 BJAB0715_03410 PF00416 Ribosomal protein S13/S18 BJAB0715_03411 PF00444 Ribosomal protein L36 BJAB0715_03412 PF00344 SecY translocase BJAB0715_03413 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BJAB0715_03414 PF00327 Ribosomal protein L30p/L7e BJAB0715_03415 PF00333 Ribosomal protein S5, N-terminal domain BJAB0715_03415 PF03719 Ribosomal protein S5, C-terminal domain BJAB0715_03416 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BJAB0715_03417 PF00347 Ribosomal protein L6 BJAB0715_03418 PF00410 Ribosomal protein S8 BJAB0715_03419 PF00253 Ribosomal protein S14p/S29e BJAB0715_03420 PF00673 ribosomal L5P family C-terminus BJAB0715_03420 PF00281 Ribosomal protein L5 BJAB0715_03421 PF00467 KOW motif BJAB0715_03421 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BJAB0715_03422 PF00238 Ribosomal protein L14p/L23e BJAB0715_03423 PF00366 Ribosomal protein S17 BJAB0715_03424 PF00831 Ribosomal L29 protein BJAB0715_03425 PF00252 Ribosomal protein L16p/L10e BJAB0715_03426 PF00189 Ribosomal protein S3, C-terminal domain BJAB0715_03426 PF07650 KH domain BJAB0715_03427 PF00237 Ribosomal protein L22p/L17e BJAB0715_03428 PF00203 Ribosomal protein S19 BJAB0715_03429 PF03947 Ribosomal Proteins L2, C-terminal domain BJAB0715_03429 PF00181 Ribosomal Proteins L2, RNA binding domain BJAB0715_03430 PF00276 Ribosomal protein L23 BJAB0715_03431 PF00573 Ribosomal protein L4/L1 family BJAB0715_03432 PF00297 Ribosomal protein L3 BJAB0715_03433 PF00338 Ribosomal protein S10p/S20e BJAB0715_03434 PF00117 Glutamine amidotransferase class-I BJAB0715_03435 PF01053 Cys/Met metabolism PLP-dependent enzyme BJAB0715_03436 PF05872 Bacterial protein of unknown function (DUF853) BJAB0715_03437 PF00042 Globin BJAB0715_03437 PF00175 Oxidoreductase NAD-binding domain BJAB0715_03437 PF00970 Oxidoreductase FAD-binding domain BJAB0715_03438 PF02082 Transcriptional regulator BJAB0715_03439 PF01926 50S ribosome-binding GTPase BJAB0715_03441 PF00375 Sodium:dicarboxylate symporter family BJAB0715_03443 PF01553 Acyltransferase BJAB0715_03446 PF17191 RecG wedge domain BJAB0715_03446 PF00270 DEAD/DEAH box helicase BJAB0715_03446 PF00271 Helicase conserved C-terminal domain BJAB0715_03447 PF00156 Phosphoribosyl transferase domain BJAB0715_03448 PF00293 NUDIX domain BJAB0715_03449 PF03641 Possible lysine decarboxylase BJAB0715_03450 PF01544 CorA-like Mg2+ transporter protein BJAB0715_03453 PF05494 MlaC protein BJAB0715_03455 PF02405 Permease MlaE BJAB0715_03456 PF00005 ABC transporter BJAB0715_03458 PF00271 Helicase conserved C-terminal domain BJAB0715_03458 PF12343 Cold shock protein DEAD box A BJAB0715_03458 PF00270 DEAD/DEAH box helicase BJAB0715_03458 PF03880 DbpA RNA binding domain BJAB0715_03459 PF00459 Inositol monophosphatase family BJAB0715_03460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BJAB0715_03460 PF02780 Transketolase, C-terminal domain BJAB0715_03460 PF02779 Transketolase, pyrimidine binding domain BJAB0715_03461 PF00925 GTP cyclohydrolase II BJAB0715_03462 PF01218 Coproporphyrinogen III oxidase BJAB0715_03463 PF01488 Shikimate / quinate 5-dehydrogenase BJAB0715_03463 PF08501 Shikimate dehydrogenase substrate binding domain BJAB0715_03463 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BJAB0715_03465 PF02770 Acyl-CoA dehydrogenase, middle domain BJAB0715_03465 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJAB0715_03465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJAB0715_03465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJAB0715_03467 PF04024 PspC domain BJAB0715_03468 PF00571 CBS domain BJAB0715_03473 PF02091 Glycyl-tRNA synthetase alpha subunit BJAB0715_03474 PF05746 DALR anticodon binding domain BJAB0715_03474 PF02092 Glycyl-tRNA synthetase beta subunit BJAB0715_03478 PF00892 EamA-like transporter family BJAB0715_03479 PF03466 LysR substrate binding domain BJAB0715_03479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03485 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BJAB0715_03486 PF04996 Succinylarginine dihydrolase BJAB0715_03487 PF00171 Aldehyde dehydrogenase family BJAB0715_03488 PF04958 Arginine N-succinyltransferase beta subunit BJAB0715_03489 PF00202 Aminotransferase class-III BJAB0715_03490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJAB0715_03490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BJAB0715_03492 PF00324 Amino acid permease BJAB0715_03494 PF08241 Methyltransferase domain BJAB0715_03498 PF13614 AAA domain BJAB0715_03499 PF01594 AI-2E family transporter BJAB0715_03500 PF00080 Copper/zinc superoxide dismutase (SODC) BJAB0715_03501 PF12805 FUSC-like inner membrane protein yccS BJAB0715_03502 PF07690 Major Facilitator Superfamily BJAB0715_03505 PF02525 Flavodoxin-like fold BJAB0715_03506 PF03992 Antibiotic biosynthesis monooxygenase BJAB0715_03508 PF01565 FAD binding domain BJAB0715_03508 PF02913 FAD linked oxidases, C-terminal domain BJAB0715_03509 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJAB0715_03509 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJAB0715_03510 PF00892 EamA-like transporter family BJAB0715_03511 PF00892 EamA-like transporter family BJAB0715_03513 PF01925 Sulfite exporter TauE/SafE BJAB0715_03514 PF01509 TruB family pseudouridylate synthase (N terminal domain) BJAB0715_03514 PF16198 tRNA pseudouridylate synthase B C-terminal domain BJAB0715_03514 PF09157 Pseudouridine synthase II TruB, C-terminal BJAB0715_03515 PF03280 Proteobacterial lipase chaperone protein BJAB0715_03516 PF00561 alpha/beta hydrolase fold BJAB0715_03517 PF01245 Ribosomal protein L19 BJAB0715_03518 PF01746 tRNA (Guanine-1)-methyltransferase BJAB0715_03519 PF01782 RimM N-terminal domain BJAB0715_03519 PF05239 PRC-barrel domain BJAB0715_03520 PF00886 Ribosomal protein S16 BJAB0715_03522 PF08334 Type II secretion system (T2SS), protein G BJAB0715_03522 PF07963 Prokaryotic N-terminal methylation motif BJAB0715_03528 PF02401 LytB protein BJAB0715_03529 PF00625 Guanylate kinase BJAB0715_03530 PF01192 RNA polymerase Rpb6 BJAB0715_03531 PF04607 Region found in RelA / SpoT proteins BJAB0715_03531 PF02824 TGS domain BJAB0715_03531 PF13291 ACT domain BJAB0715_03532 PF01042 Endoribonuclease L-PSP BJAB0715_03533 PF04324 BFD-like [2Fe-2S] binding domain BJAB0715_03534 PF00210 Ferritin-like domain BJAB0715_03535 PF04932 O-Antigen ligase BJAB0715_03535 PF15864 Protein glycosylation ligase BJAB0715_03535 PF11846 Virulence factor membrane-bound polymerase, C-terminal BJAB0715_03537 PF00114 Pilin (bacterial filament) BJAB0715_03537 PF07963 Prokaryotic N-terminal methylation motif BJAB0715_03539 PF04536 TPM domain BJAB0715_03540 PF04011 LemA family BJAB0715_03542 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJAB0715_03542 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BJAB0715_03543 PF01493 GXGXG motif BJAB0715_03543 PF01645 Conserved region in glutamate synthase BJAB0715_03543 PF04898 Glutamate synthase central domain BJAB0715_03543 PF00310 Glutamine amidotransferases class-II BJAB0715_03545 PF01761 3-dehydroquinate synthase BJAB0715_03546 PF01202 Shikimate kinase BJAB0715_03547 PF07660 Secretin and TonB N terminus short domain BJAB0715_03547 PF03958 Bacterial type II/III secretion system short domain BJAB0715_03547 PF00263 Bacterial type II and III secretion system protein BJAB0715_03547 PF11741 AMIN domain BJAB0715_03552 PF00912 Transglycosylase BJAB0715_03552 PF17092 Penicillin-binding protein OB-like domain BJAB0715_03552 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_03553 PF13847 Methyltransferase domain BJAB0715_03555 PF00953 Glycosyl transferase family 4 BJAB0715_03556 PF01225 Mur ligase family, catalytic domain BJAB0715_03556 PF08245 Mur ligase middle domain BJAB0715_03556 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_03557 PF01225 Mur ligase family, catalytic domain BJAB0715_03557 PF08245 Mur ligase middle domain BJAB0715_03557 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_03558 PF03717 Penicillin-binding Protein dimerisation domain BJAB0715_03558 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_03560 PF01795 MraW methylase family BJAB0715_03563 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJAB0715_03564 PF00324 Amino acid permease BJAB0715_03568 PF01545 Cation efflux family BJAB0715_03569 PF00873 AcrB/AcrD/AcrF family BJAB0715_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_03570 PF00529 HlyD membrane-fusion protein of T1SS BJAB0715_03577 PF00005 ABC transporter BJAB0715_03577 PF12848 ABC transporter BJAB0715_03578 PF01053 Cys/Met metabolism PLP-dependent enzyme BJAB0715_03579 PF00106 short chain dehydrogenase BJAB0715_03580 PF00916 Sulfate permease family BJAB0715_03580 PF01740 STAS domain BJAB0715_03581 PF09371 Tex-like protein N-terminal domain BJAB0715_03581 PF16921 Tex protein YqgF-like domain BJAB0715_03581 PF17674 HHH domain BJAB0715_03581 PF00575 S1 RNA binding domain BJAB0715_03582 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_03582 PF00072 Response regulator receiver domain BJAB0715_03583 PF00672 HAMP domain BJAB0715_03583 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03584 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BJAB0715_03584 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BJAB0715_03585 PF00583 Acetyltransferase (GNAT) family BJAB0715_03587 PF00475 Imidazoleglycerol-phosphate dehydratase BJAB0715_03588 PF00117 Glutamine amidotransferase class-I BJAB0715_03591 PF00977 Histidine biosynthesis protein BJAB0715_03592 PF00664 ABC transporter transmembrane region BJAB0715_03592 PF00005 ABC transporter BJAB0715_03595 PF03992 Antibiotic biosynthesis monooxygenase BJAB0715_03598 PF01636 Phosphotransferase enzyme family BJAB0715_03599 PF00977 Histidine biosynthesis protein BJAB0715_03602 PF00230 Major intrinsic protein BJAB0715_03608 PF02705 K+ potassium transporter BJAB0715_03609 PF12833 Helix-turn-helix domain BJAB0715_03613 PF02525 Flavodoxin-like fold BJAB0715_03614 PF01638 HxlR-like helix-turn-helix BJAB0715_03616 PF00005 ABC transporter BJAB0715_03619 PF12833 Helix-turn-helix domain BJAB0715_03619 PF02311 AraC-like ligand binding domain BJAB0715_03620 PF00248 Aldo/keto reductase family BJAB0715_03630 PF03466 LysR substrate binding domain BJAB0715_03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03631 PF07690 Major Facilitator Superfamily BJAB0715_03651 PF02463 RecF/RecN/SMC N terminal domain BJAB0715_03654 PF01593 Flavin containing amine oxidoreductase BJAB0715_03656 PF02678 Pirin BJAB0715_03656 PF05726 Pirin C-terminal cupin domain BJAB0715_03657 PF00857 Isochorismatase family BJAB0715_03658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03659 PF00171 Aldehyde dehydrogenase family BJAB0715_03660 PF00202 Aminotransferase class-III BJAB0715_03661 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_03661 PF00155 Aminotransferase class I and II BJAB0715_03662 PF00324 Amino acid permease BJAB0715_03664 PF03591 AzlC protein BJAB0715_03666 PF00436 Single-strand binding protein family BJAB0715_03667 PF07690 Major Facilitator Superfamily BJAB0715_03669 PF03070 TENA/THI-4/PQQC family BJAB0715_03669 PF02581 Thiamine monophosphate synthase BJAB0715_03669 PF08543 Phosphomethylpyrimidine kinase BJAB0715_03670 PF06942 GlpM protein BJAB0715_03672 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_03672 PF00107 Zinc-binding dehydrogenase BJAB0715_03673 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_03673 PF16925 Tetracyclin repressor-like, C-terminal domain BJAB0715_03674 PF17755 UvrA DNA-binding domain BJAB0715_03674 PF00005 ABC transporter BJAB0715_03674 PF17760 UvrA interaction domain BJAB0715_03675 PF17158 Membrane-associated sensor, integral membrane domain BJAB0715_03675 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_03677 PF02028 BCCT, betaine/carnitine/choline family transporter BJAB0715_03679 PF00474 Sodium:solute symporter family BJAB0715_03680 PF04341 Protein of unknown function, DUF485 BJAB0715_03681 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03681 PF00672 HAMP domain BJAB0715_03681 PF01627 Hpt domain BJAB0715_03681 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03681 PF00072 Response regulator receiver domain BJAB0715_03683 PF00196 Bacterial regulatory proteins, luxR family BJAB0715_03683 PF00072 Response regulator receiver domain BJAB0715_03684 PF03358 NADPH-dependent FMN reductase BJAB0715_03685 PF00296 Luciferase-like monooxygenase BJAB0715_03686 PF01037 Lrp/AsnC ligand binding domain BJAB0715_03687 PF00857 Isochorismatase family BJAB0715_03688 PF16177 Acetyl-coenzyme A synthetase N-terminus BJAB0715_03688 PF00501 AMP-binding enzyme BJAB0715_03688 PF13193 AMP-binding enzyme C-terminal domain BJAB0715_03690 PF00924 Mechanosensitive ion channel BJAB0715_03691 PF04452 RNA methyltransferase BJAB0715_03692 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BJAB0715_03693 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJAB0715_03696 PF00472 RF-1 domain BJAB0715_03696 PF03462 PCRF domain BJAB0715_03698 PF01368 DHH family BJAB0715_03698 PF02272 DHHA1 domain BJAB0715_03698 PF17768 RecJ OB domain BJAB0715_03699 PF01243 Pyridoxamine 5'-phosphate oxidase BJAB0715_03699 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BJAB0715_03700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJAB0715_03700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJAB0715_03700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJAB0715_03700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJAB0715_03701 PF00478 IMP dehydrogenase / GMP reductase domain BJAB0715_03701 PF00571 CBS domain BJAB0715_03702 PF03692 Putative zinc- or iron-chelating domain BJAB0715_03703 PF00258 Flavodoxin BJAB0715_03703 PF01613 Flavin reductase like domain BJAB0715_03704 PF00593 TonB dependent receptor BJAB0715_03704 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_03705 PF01169 Uncharacterized protein family UPF0016 BJAB0715_03707 PF02817 e3 binding domain BJAB0715_03707 PF00364 Biotin-requiring enzyme BJAB0715_03707 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJAB0715_03708 PF00456 Transketolase, thiamine diphosphate binding domain BJAB0715_03708 PF17831 Pyruvate dehydrogenase E1 component middle domain BJAB0715_03709 PF01551 Peptidase family M23 BJAB0715_03711 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BJAB0715_03712 PF12327 FtsZ family, C-terminal domain BJAB0715_03712 PF00091 Tubulin/FtsZ family, GTPase domain BJAB0715_03713 PF02491 SHS2 domain inserted in FTSA BJAB0715_03714 PF03799 Cell division protein FtsQ BJAB0715_03714 PF08478 POTRA domain, FtsQ-type BJAB0715_03715 PF01820 D-ala D-ala ligase N-terminus BJAB0715_03715 PF07478 D-ala D-ala ligase C-terminus BJAB0715_03716 PF08245 Mur ligase middle domain BJAB0715_03716 PF02875 Mur ligase family, glutamate ligase domain BJAB0715_03716 PF01225 Mur ligase family, catalytic domain BJAB0715_03717 PF03033 Glycosyltransferase family 28 N-terminal domain BJAB0715_03717 PF04101 Glycosyltransferase family 28 C-terminal domain BJAB0715_03718 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BJAB0715_03718 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BJAB0715_03720 PF07715 TonB-dependent Receptor Plug Domain BJAB0715_03720 PF00593 TonB dependent receptor BJAB0715_03722 PF00156 Phosphoribosyl transferase domain BJAB0715_03723 PF03372 Endonuclease/Exonuclease/phosphatase family BJAB0715_03724 PF03960 ArsC family BJAB0715_03726 PF07859 alpha/beta hydrolase fold BJAB0715_03727 PF07694 5TMR of 5TMR-LYT BJAB0715_03727 PF00990 Diguanylate cyclase, GGDEF domain BJAB0715_03728 PF02683 Cytochrome C biogenesis protein transmembrane region BJAB0715_03728 PF11412 Disulphide bond corrector protein DsbC BJAB0715_03734 PF00576 HIUase/Transthyretin family BJAB0715_03735 PF00860 Permease family BJAB0715_03737 PF01494 FAD binding domain BJAB0715_03738 PF03561 Allantoicase repeat BJAB0715_03739 PF04115 Ureidoglycolate lyase BJAB0715_03740 PF00106 short chain dehydrogenase BJAB0715_03742 PF00986 DNA gyrase B subunit, carboxyl terminus BJAB0715_03742 PF00204 DNA gyrase B BJAB0715_03742 PF01751 Toprim domain BJAB0715_03742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03743 PF05728 Uncharacterised protein family (UPF0227) BJAB0715_03755 PF04717 Type VI secretion system, phage-baseplate injector BJAB0715_03756 PF02600 Disulfide bond formation protein DsbB BJAB0715_03757 PF04262 Glutamate-cysteine ligase BJAB0715_03760 PF04286 Protein of unknown function (DUF445) BJAB0715_03761 PF00155 Aminotransferase class I and II BJAB0715_03762 PF01554 MatE BJAB0715_03763 PF00106 short chain dehydrogenase BJAB0715_03765 PF00072 Response regulator receiver domain BJAB0715_03765 PF00486 Transcriptional regulatory protein, C terminal BJAB0715_03766 PF11808 Phosphate regulon sensor protein PhoR BJAB0715_03766 PF00989 PAS fold BJAB0715_03766 PF00512 His Kinase A (phospho-acceptor) domain BJAB0715_03766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJAB0715_03768 PF02666 Phosphatidylserine decarboxylase BJAB0715_03769 PF00581 Rhodanese-like domain BJAB0715_03770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BJAB0715_03770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BJAB0715_03771 PF02580 D-Tyr-tRNA(Tyr) deacylase BJAB0715_03776 PF00925 GTP cyclohydrolase II BJAB0715_03776 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJAB0715_03777 PF00885 6,7-dimethyl-8-ribityllumazine synthase BJAB0715_03778 PF01029 NusB family BJAB0715_03779 PF02769 AIR synthase related protein, C-terminal domain BJAB0715_03779 PF00586 AIR synthase related protein, N-terminal domain BJAB0715_03781 PF04608 Phosphatidylglycerophosphatase A BJAB0715_03782 PF12804 MobA-like NTP transferase domain BJAB0715_03782 PF00132 Bacterial transferase hexapeptide (six repeats) BJAB0715_03782 PF14602 Hexapeptide repeat of succinyl-transferase BJAB0715_03783 PF01380 SIS domain BJAB0715_03784 PF01177 Asp/Glu/Hydantoin racemase BJAB0715_03787 PF00491 Arginase family BJAB0715_03788 PF01979 Amidohydrolase family BJAB0715_03789 PF00324 Amino acid permease BJAB0715_03790 PF00221 Aromatic amino acid lyase BJAB0715_03791 PF17392 Urocanase C-terminal domain BJAB0715_03791 PF17391 Urocanase N-terminal domain BJAB0715_03791 PF01175 Urocanase Rossmann-like domain BJAB0715_03792 PF05962 HutD BJAB0715_03793 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_03793 PF07702 UTRA domain BJAB0715_03795 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJAB0715_03795 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJAB0715_03797 PF00324 Amino acid permease BJAB0715_03799 PF02798 Glutathione S-transferase, N-terminal domain BJAB0715_03799 PF14497 Glutathione S-transferase, C-terminal domain BJAB0715_03800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJAB0715_03802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJAB0715_03803 PF04463 Protein of unknown function (DUF523) BJAB0715_03804 PF01554 MatE BJAB0715_03805 PF01758 Sodium Bile acid symporter family BJAB0715_03806 PF00857 Isochorismatase family BJAB0715_03807 PF00701 Dihydrodipicolinate synthetase family BJAB0715_03809 PF01259 SAICAR synthetase BJAB0715_03811 PF01226 Formate/nitrite transporter BJAB0715_03812 PF12002 MgsA AAA+ ATPase C terminal BJAB0715_03812 PF00004 ATPase family associated with various cellular activities (AAA) BJAB0715_03812 PF16193 AAA C-terminal domain BJAB0715_03813 PF07995 Glucose / Sorbosone dehydrogenase BJAB0715_03814 PF03692 Putative zinc- or iron-chelating domain BJAB0715_03815 PF07043 Protein of unknown function (DUF1328) BJAB0715_03818 PF14815 NUDIX domain BJAB0715_03818 PF00633 Helix-hairpin-helix motif BJAB0715_03818 PF10576 Iron-sulfur binding domain of endonuclease III BJAB0715_03818 PF00730 HhH-GPD superfamily base excision DNA repair protein BJAB0715_03821 PF03352 Methyladenine glycosylase BJAB0715_03822 PF08240 Alcohol dehydrogenase GroES-like domain BJAB0715_03822 PF00107 Zinc-binding dehydrogenase BJAB0715_03823 PF00155 Aminotransferase class I and II BJAB0715_03823 PF00392 Bacterial regulatory proteins, gntR family BJAB0715_03825 PF03466 LysR substrate binding domain BJAB0715_03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03826 PF00248 Aldo/keto reductase family BJAB0715_03827 PF07690 Major Facilitator Superfamily BJAB0715_03829 PF01113 Dihydrodipicolinate reductase, N-terminus BJAB0715_03829 PF05173 Dihydrodipicolinate reductase, C-terminus BJAB0715_03831 PF00226 DnaJ domain BJAB0715_03831 PF01556 DnaJ C terminal domain BJAB0715_03831 PF00684 DnaJ central domain BJAB0715_03833 PF00873 AcrB/AcrD/AcrF family BJAB0715_03834 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJAB0715_03835 PF08361 MAATS-type transcriptional repressor, C-terminal region BJAB0715_03835 PF00440 Bacterial regulatory proteins, tetR family BJAB0715_03836 PF00311 Phosphoenolpyruvate carboxylase BJAB0715_03837 PF00860 Permease family BJAB0715_03838 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJAB0715_03838 PF03466 LysR substrate binding domain BJAB0715_03841 PF00920 Dehydratase family BJAB0715_03842 PF00551 Formyl transferase BJAB0715_03842 PF02911 Formyl transferase, C-terminal domain BJAB0715_03843 PF01189 16S rRNA methyltransferase RsmB/F BJAB0715_03843 PF01029 NusB family BJAB0715_03845 PF00209 Sodium:neurotransmitter symporter family BJAB0715_p0001 PF00665 Integrase core domain BJAB0715_p0001 PF13936 Helix-turn-helix domain BJAB0715_p0002 PF01636 Phosphotransferase enzyme family BJAB0715_p0003 PF13936 Helix-turn-helix domain BJAB0715_p0003 PF00665 Integrase core domain BJAB0715_p0005 PF05973 Phage derived protein Gp49-like (DUF891) BJAB0715_p0011 PF00239 Resolvase, N terminal domain BJAB0715_p0011 PF02796 Helix-turn-helix domain of resolvase BJAB0715_p0012 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BJAB0715_p0012 PF13542 Helix-turn-helix domain of transposase family ISL3 BJAB0715_p0012 PF01610 Transposase BJAB0715_p0013 PF07690 Major Facilitator Superfamily BJAB0715_p0014 PF13276 HTH-like domain BJAB0715_p0014 PF00665 Integrase core domain BJAB0715_p0014 PF13333 Integrase core domain BJAB0715_p0027 PF02522 Aminoglycoside 3-N-acetyltransferase BJAB0715_p0037 PF17762 HTH domain found in ParB protein BJAB0715_p0037 PF02195 ParB-like nuclease domain BJAB0715_p0038 PF13614 AAA domain BJAB0715_p0040 PF13737 Transposase DDE domain BJAB0715_p0046 PF01527 Transposase BJAB0715_p0047 PF00665 Integrase core domain BJAB0715_p0047 PF13333 Integrase core domain BJAB0715_p0047 PF13276 HTH-like domain BJAB0715_p0048 PF00717 Peptidase S24-like BJAB0715_p0049 PF11799 impB/mucB/samB family C-terminal domain BJAB0715_p0049 PF00817 impB/mucB/samB family BJAB0715_p0049 PF13438 Domain of unknown function (DUF4113) BJAB0715_p0051 PF02601 Exonuclease VII, large subunit BJAB0715_p0051 PF13742 OB-fold nucleic acid binding domain BJAB0715_p0052 PF13610 DDE domain BJAB0715_p0053 PF00905 Penicillin binding protein transpeptidase domain BJAB0715_p0057 PF13276 HTH-like domain BJAB0715_p0057 PF13683 Integrase core domain BJAB0715_p0058 PF01527 Transposase BJAB0715_p0059 PF12833 Helix-turn-helix domain