locus-tag class description D7A46_00085 PF01556 DnaJ C terminal domain D7A46_00085 PF00684 DnaJ central domain D7A46_00085 PF00226 DnaJ domain D7A46_00560 PF00120 Glutamine synthetase, catalytic domain D7A46_00570 PF03232 Ubiquinone biosynthesis protein COQ7 D7A46_00575 PF07690 Major Facilitator Superfamily D7A46_00600 PF11791 Aconitate B N-terminal domain D7A46_00600 PF06434 Aconitate hydratase 2 N-terminus D7A46_00600 PF00330 Aconitase family (aconitate hydratase) D7A46_00610 PF00027 Cyclic nucleotide-binding domain D7A46_00610 PF00520 Ion transport protein D7A46_00615 PF07690 Major Facilitator Superfamily D7A46_00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_00630 PF03466 LysR substrate binding domain D7A46_00635 PF04284 Protein of unknown function (DUF441) D7A46_00645 PF01479 S4 domain D7A46_00645 PF00849 RNA pseudouridylate synthase D7A46_00660 PF01479 S4 domain D7A46_00660 PF00849 RNA pseudouridylate synthase D7A46_00665 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D7A46_00670 PF08676 MutL C terminal dimerisation domain D7A46_00670 PF01119 DNA mismatch repair protein, C-terminal domain D7A46_00680 PF17209 Hfq protein D7A46_00690 PF00881 Nitroreductase family D7A46_00700 PF00149 Calcineurin-like phosphoesterase D7A46_00705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D7A46_00710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D7A46_00710 PF00749 tRNA synthetases class I (E and Q), catalytic domain D7A46_00715 PF00117 Glutamine amidotransferase class-I D7A46_00715 PF00958 GMP synthase C terminal domain D7A46_00715 PF02540 NAD synthase D7A46_00720 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D7A46_00725 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D7A46_00730 PF13520 Amino acid permease D7A46_00735 PF00171 Aldehyde dehydrogenase family D7A46_00750 PF00465 Iron-containing alcohol dehydrogenase D7A46_00755 PF14493 Helix-turn-helix domain D7A46_00755 PF05970 PIF1-like helicase D7A46_00765 PF06445 GyrI-like small molecule binding domain D7A46_00770 PF02110 Hydroxyethylthiazole kinase family D7A46_00785 PF11940 Domain of unknown function (DUF3458) Ig-like fold D7A46_00785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D7A46_00785 PF01433 Peptidase family M1 domain D7A46_00815 PF01817 Chorismate mutase type II D7A46_00820 PF01037 Lrp/AsnC ligand binding domain D7A46_00835 PF00440 Bacterial regulatory proteins, tetR family D7A46_00840 PF07715 TonB-dependent Receptor Plug Domain D7A46_00840 PF00593 TonB dependent receptor D7A46_00845 PF00924 Mechanosensitive ion channel D7A46_00880 PF07715 TonB-dependent Receptor Plug Domain D7A46_00880 PF00593 TonB dependent receptor D7A46_00900 PF00005 ABC transporter D7A46_00900 PF12848 ABC transporter D7A46_00905 PF00582 Universal stress protein family D7A46_00920 PF00689 Cation transporting ATPase, C-terminus D7A46_00920 PF00690 Cation transporter/ATPase, N-terminus D7A46_00925 PF02308 MgtC family D7A46_00930 PF03594 Benzoate membrane transport protein D7A46_00935 PF01037 Lrp/AsnC ligand binding domain D7A46_00940 PF01810 LysE type translocator D7A46_00950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_00950 PF03466 LysR substrate binding domain D7A46_00960 PF02803 Thiolase, C-terminal domain D7A46_00960 PF00108 Thiolase, N-terminal domain D7A46_00985 PF07690 Major Facilitator Superfamily D7A46_00990 PF12170 DNA polymerase III tau subunit V interacting with alpha D7A46_00990 PF12169 DNA polymerase III subunits gamma and tau domain III D7A46_00990 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D7A46_00995 PF05506 Domain of unknown function (DUF756) D7A46_00995 PF04185 Phosphoesterase family D7A46_01000 PF03061 Thioesterase superfamily D7A46_01005 PF00465 Iron-containing alcohol dehydrogenase D7A46_01015 PF01451 Low molecular weight phosphotyrosine protein phosphatase D7A46_01020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D7A46_01020 PF01565 FAD binding domain D7A46_01035 PF01645 Conserved region in glutamate synthase D7A46_01105 PF02384 N-6 DNA Methylase D7A46_01105 PF12161 HsdM N-terminal domain D7A46_01135 PF01555 DNA methylase D7A46_01325 PF01476 LysM domain D7A46_01325 PF01551 Peptidase family M23 D7A46_01325 PF08525 Opacity-associated protein A N-terminal motif D7A46_01390 PF12832 MFS_1 like family D7A46_01400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_01400 PF02785 Biotin carboxylase C-terminal domain D7A46_01400 PF00289 Biotin carboxylase, N-terminal domain D7A46_01405 PF00364 Biotin-requiring enzyme D7A46_01410 PF01220 Dehydroquinase class II D7A46_01415 PF00817 impB/mucB/samB family D7A46_01415 PF11799 impB/mucB/samB family C-terminal domain D7A46_01415 PF13438 Domain of unknown function (DUF4113) D7A46_01425 PF00005 ABC transporter D7A46_01430 PF00486 Transcriptional regulatory protein, C terminal D7A46_01430 PF00072 Response regulator receiver domain D7A46_01440 PF04324 BFD-like [2Fe-2S] binding domain D7A46_01440 PF18267 Rubredoxin NAD+ reductase C-terminal domain D7A46_01440 PF13806 Rieske-like [2Fe-2S] domain D7A46_01440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D7A46_01440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D7A46_01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_01445 PF18267 Rubredoxin NAD+ reductase C-terminal domain D7A46_01445 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_01445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D7A46_01445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D7A46_01445 PF04324 BFD-like [2Fe-2S] binding domain D7A46_01450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D7A46_01450 PF00384 Molybdopterin oxidoreductase D7A46_01450 PF04324 BFD-like [2Fe-2S] binding domain D7A46_01450 PF01568 Molydopterin dinucleotide binding domain D7A46_01455 PF12804 MobA-like NTP transferase domain D7A46_01460 PF00384 Molybdopterin oxidoreductase D7A46_01460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D7A46_01460 PF01568 Molydopterin dinucleotide binding domain D7A46_01465 PF04055 Radical SAM superfamily D7A46_01465 PF06463 Molybdenum Cofactor Synthesis C D7A46_01475 PF02391 MoaE protein D7A46_01480 PF01967 MoaC family D7A46_01480 PF00994 Probable molybdopterin binding domain D7A46_01485 PF03454 MoeA C-terminal region (domain IV) D7A46_01485 PF00994 Probable molybdopterin binding domain D7A46_01485 PF03453 MoeA N-terminal region (domain I and II) D7A46_01490 PF01638 HxlR-like helix-turn-helix D7A46_01495 PF00392 Bacterial regulatory proteins, gntR family D7A46_01495 PF00155 Aminotransferase class I and II D7A46_01500 PF00892 EamA-like transporter family D7A46_01520 PF02635 DsrE/DsrF-like family D7A46_01525 PF16363 GDP-mannose 4,6 dehydratase D7A46_01530 PF00206 Lyase D7A46_01530 PF10415 Fumarase C C-terminus D7A46_01555 PF01266 FAD dependent oxidoreductase D7A46_01565 PF02542 YgbB family D7A46_01575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D7A46_01575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D7A46_01580 PF00440 Bacterial regulatory proteins, tetR family D7A46_01585 PF02954 Bacterial regulatory protein, Fis family D7A46_01585 PF00072 Response regulator receiver domain D7A46_01585 PF00158 Sigma-54 interaction domain D7A46_01590 PF00989 PAS fold D7A46_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_01590 PF00512 His Kinase A (phospho-acceptor) domain D7A46_01595 PF04055 Radical SAM superfamily D7A46_01595 PF18693 TRAM domain D7A46_01595 PF00919 Uncharacterized protein family UPF0004 D7A46_01600 PF00696 Amino acid kinase family D7A46_01605 PF01765 Ribosome recycling factor D7A46_01610 PF01255 Putative undecaprenyl diphosphate synthase D7A46_01620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D7A46_01620 PF13288 DXP reductoisomerase C-terminal domain D7A46_01620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D7A46_01625 PF13180 PDZ domain D7A46_01625 PF02163 Peptidase family M50 D7A46_01625 PF17820 PDZ domain D7A46_01630 PF01103 Surface antigen D7A46_01630 PF07244 Surface antigen variable number repeat D7A46_01640 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D7A46_01640 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_01645 PF07977 FabA-like domain D7A46_01650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D7A46_01650 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_01665 PF02631 RecX family D7A46_01670 PF00154 recA bacterial DNA recombination protein D7A46_01675 PF01479 S4 domain D7A46_01680 PF13419 Haloacid dehalogenase-like hydrolase D7A46_01705 PF01037 Lrp/AsnC ligand binding domain D7A46_01710 PF00266 Aminotransferase class-V D7A46_01715 PF00324 Amino acid permease D7A46_01725 PF05922 Peptidase inhibitor I9 D7A46_01725 PF00082 Subtilase family D7A46_01730 PF00916 Sulfate permease family D7A46_01730 PF01740 STAS domain D7A46_01735 PF02586 SOS response associated peptidase (SRAP) D7A46_01740 PF07995 Glucose / Sorbosone dehydrogenase D7A46_01750 PF03707 Bacterial signalling protein N terminal repeat D7A46_01750 PF00990 Diguanylate cyclase, GGDEF domain D7A46_01750 PF00563 EAL domain D7A46_01770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D7A46_01770 PF02378 Phosphotransferase system, EIIC D7A46_01775 PF00294 pfkB family carbohydrate kinase D7A46_01780 PF00391 PEP-utilising enzyme, mobile domain D7A46_01780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D7A46_01780 PF05524 PEP-utilising enzyme, N-terminal D7A46_01780 PF02896 PEP-utilising enzyme, TIM barrel domain D7A46_01780 PF00381 PTS HPr component phosphorylation site D7A46_01805 PF05525 Branched-chain amino acid transport protein D7A46_01810 PF00557 Metallopeptidase family M24 D7A46_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_01815 PF03466 LysR substrate binding domain D7A46_01825 PF00462 Glutaredoxin D7A46_01830 PF00202 Aminotransferase class-III D7A46_01835 PF00478 IMP dehydrogenase / GMP reductase domain D7A46_01835 PF00571 CBS domain D7A46_01860 PF00448 SRP54-type protein, GTPase domain D7A46_01860 PF02881 SRP54-type protein, helical bundle domain D7A46_01870 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D7A46_01885 PF08173 Membrane bound YbgT-like protein D7A46_01890 PF02322 Cytochrome bd terminal oxidase subunit II D7A46_01895 PF01654 Cytochrome bd terminal oxidase subunit I D7A46_01905 PF07290 Protein of unknown function (DUF1449) D7A46_01915 PF00294 pfkB family carbohydrate kinase D7A46_01920 PF00593 TonB dependent receptor D7A46_01920 PF07715 TonB-dependent Receptor Plug Domain D7A46_01925 PF00675 Insulinase (Peptidase family M16) D7A46_01925 PF05193 Peptidase M16 inactive domain D7A46_01925 PF08367 Peptidase M16C associated D7A46_01930 PF02253 Phospholipase A1 D7A46_01935 PF02386 Cation transport protein D7A46_01940 PF02080 TrkA-C domain D7A46_01940 PF02254 TrkA-N domain D7A46_01945 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_01945 PF00585 C-terminal regulatory domain of Threonine dehydratase D7A46_01950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D7A46_01965 PF02774 Semialdehyde dehydrogenase, dimerisation domain D7A46_01965 PF01118 Semialdehyde dehydrogenase, NAD binding domain D7A46_01975 PF02617 ATP-dependent Clp protease adaptor protein ClpS D7A46_01980 PF07724 AAA domain (Cdc48 subfamily) D7A46_01980 PF17871 AAA lid domain D7A46_01980 PF10431 C-terminal, D2-small domain, of ClpB protein D7A46_01980 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_01980 PF02861 Clp amino terminal domain, pathogenicity island component D7A46_01985 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D7A46_01990 PF00793 DAHP synthetase I family D7A46_02005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_02005 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_02035 PF06418 CTP synthase N-terminus D7A46_02035 PF00117 Glutamine amidotransferase class-I D7A46_02040 PF00793 DAHP synthetase I family D7A46_02045 PF00113 Enolase, C-terminal TIM barrel domain D7A46_02045 PF03952 Enolase, N-terminal domain D7A46_02050 PF04239 Protein of unknown function (DUF421) D7A46_02055 PF04977 Septum formation initiator D7A46_02060 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D7A46_02065 PF01144 Coenzyme A transferase D7A46_02070 PF01144 Coenzyme A transferase D7A46_02075 PF00108 Thiolase, N-terminal domain D7A46_02075 PF02803 Thiolase, C-terminal domain D7A46_02080 PF10397 Adenylosuccinate lyase C-terminus D7A46_02080 PF00206 Lyase D7A46_02085 PF00561 alpha/beta hydrolase fold D7A46_02090 PF07690 Major Facilitator Superfamily D7A46_02095 PF02627 Carboxymuconolactone decarboxylase family D7A46_02100 PF00775 Dioxygenase D7A46_02100 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D7A46_02105 PF00775 Dioxygenase D7A46_02110 PF01487 Type I 3-dehydroquinase D7A46_02115 PF05048 Periplasmic copper-binding protein (NosD) D7A46_02120 PF04966 Carbohydrate-selective porin, OprB family D7A46_02125 PF01011 PQQ enzyme repeat D7A46_02125 PF13360 PQQ-like domain D7A46_02135 PF04143 Sulphur transport D7A46_02145 PF00753 Metallo-beta-lactamase superfamily D7A46_02150 PF09339 IclR helix-turn-helix domain D7A46_02150 PF01614 Bacterial transcriptional regulator D7A46_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_02155 PF03466 LysR substrate binding domain D7A46_02160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_02160 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_02160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_02175 PF00106 short chain dehydrogenase D7A46_02185 PF07690 Major Facilitator Superfamily D7A46_02195 PF01425 Amidase D7A46_02200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D7A46_02215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D7A46_02215 PF00355 Rieske [2Fe-2S] domain D7A46_02230 PF00175 Oxidoreductase NAD-binding domain D7A46_02230 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_02235 PF01613 Flavin reductase like domain D7A46_02240 PF02311 AraC-like ligand binding domain D7A46_02240 PF12833 Helix-turn-helix domain D7A46_02245 PF02728 Copper amine oxidase, N3 domain D7A46_02245 PF02727 Copper amine oxidase, N2 domain D7A46_02245 PF07833 Copper amine oxidase N-terminal domain D7A46_02245 PF01179 Copper amine oxidase, enzyme domain D7A46_02255 PF00171 Aldehyde dehydrogenase family D7A46_02260 PF01804 Penicillin amidase D7A46_02265 PF12146 Serine aminopeptidase, S33 D7A46_02270 PF02803 Thiolase, C-terminal domain D7A46_02270 PF00108 Thiolase, N-terminal domain D7A46_02275 PF01144 Coenzyme A transferase D7A46_02280 PF01144 Coenzyme A transferase D7A46_02285 PF04444 Catechol dioxygenase N terminus D7A46_02285 PF00775 Dioxygenase D7A46_02290 PF02426 Muconolactone delta-isomerase D7A46_02295 PF13378 Enolase C-terminal domain-like D7A46_02295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D7A46_02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_02300 PF03466 LysR substrate binding domain D7A46_02310 PF07729 FCD domain D7A46_02310 PF00392 Bacterial regulatory proteins, gntR family D7A46_02315 PF00920 Dehydratase family D7A46_02320 PF07690 Major Facilitator Superfamily D7A46_02330 PF00171 Aldehyde dehydrogenase family D7A46_02350 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_02350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_02350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_02360 PF02954 Bacterial regulatory protein, Fis family D7A46_02360 PF00158 Sigma-54 interaction domain D7A46_02360 PF06506 Propionate catabolism activator D7A46_02365 PF13193 AMP-binding enzyme C-terminal domain D7A46_02365 PF00501 AMP-binding enzyme D7A46_02370 PF04341 Protein of unknown function, DUF485 D7A46_02375 PF00474 Sodium:solute symporter family D7A46_02380 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_02380 PF00107 Zinc-binding dehydrogenase D7A46_02385 PF00171 Aldehyde dehydrogenase family D7A46_02395 PF00561 alpha/beta hydrolase fold D7A46_02400 PF06628 Catalase-related immune-responsive D7A46_02400 PF00199 Catalase D7A46_02420 PF07859 alpha/beta hydrolase fold D7A46_02425 PF01047 MarR family D7A46_02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_02430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_02435 PF00106 short chain dehydrogenase D7A46_02440 PF01872 RibD C-terminal domain D7A46_02445 PF00376 MerR family regulatory protein D7A46_02445 PF09278 MerR, DNA binding D7A46_02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_02465 PF12706 Beta-lactamase superfamily domain D7A46_02470 PF08359 YsiA-like protein, C-terminal region D7A46_02470 PF00440 Bacterial regulatory proteins, tetR family D7A46_02480 PF00857 Isochorismatase family D7A46_02485 PF03466 LysR substrate binding domain D7A46_02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_02490 PF07995 Glucose / Sorbosone dehydrogenase D7A46_02495 PF02254 TrkA-N domain D7A46_02495 PF00999 Sodium/hydrogen exchanger family D7A46_02505 PF07687 Peptidase dimerisation domain D7A46_02505 PF01546 Peptidase family M20/M25/M40 D7A46_02520 PF17287 POTRA domain D7A46_02520 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D7A46_02520 PF08479 POTRA domain, ShlB-type D7A46_02525 PF13332 Hemagglutinin repeat D7A46_02525 PF05860 haemagglutination activity domain D7A46_02525 PF04829 Pre-toxin domain with VENN motif D7A46_02525 PF13018 Extended Signal Peptide of Type V secretion system D7A46_02540 PF07690 Major Facilitator Superfamily D7A46_02545 PF04909 Amidohydrolase D7A46_02560 PF08450 SMP-30/Gluconolactonase/LRE-like region D7A46_02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_02570 PF03466 LysR substrate binding domain D7A46_02590 PF07690 Major Facilitator Superfamily D7A46_02595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D7A46_02595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D7A46_02595 PF01842 ACT domain D7A46_02600 PF03737 Aldolase/RraA D7A46_02620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_02620 PF00529 HlyD membrane-fusion protein of T1SS D7A46_02635 PF00171 Aldehyde dehydrogenase family D7A46_02640 PF00920 Dehydratase family D7A46_02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_02650 PF03466 LysR substrate binding domain D7A46_02655 PF01370 NAD dependent epimerase/dehydratase family D7A46_02660 PF07690 Major Facilitator Superfamily D7A46_02665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D7A46_02665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D7A46_02670 PF06719 AraC-type transcriptional regulator N-terminus D7A46_02670 PF12833 Helix-turn-helix domain D7A46_02685 PF00107 Zinc-binding dehydrogenase D7A46_02685 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_02700 PF00005 ABC transporter D7A46_02720 PF14572 Phosphoribosyl synthetase-associated domain D7A46_02720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D7A46_02725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D7A46_02800 PF00196 Bacterial regulatory proteins, luxR family D7A46_02805 PF01425 Amidase D7A46_02810 PF13533 Biotin-lipoyl like D7A46_02815 PF07690 Major Facilitator Superfamily D7A46_02840 PF01975 Survival protein SurE D7A46_02850 PF13291 ACT domain D7A46_02850 PF02824 TGS domain D7A46_02850 PF04607 Region found in RelA / SpoT proteins D7A46_02905 PF12146 Serine aminopeptidase, S33 D7A46_02910 PF12833 Helix-turn-helix domain D7A46_02910 PF02311 AraC-like ligand binding domain D7A46_02920 PF16527 Two-component sensor protein CpxA, periplasmic domain D7A46_02920 PF00512 His Kinase A (phospho-acceptor) domain D7A46_02920 PF00672 HAMP domain D7A46_02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_02925 PF00072 Response regulator receiver domain D7A46_02925 PF00486 Transcriptional regulatory protein, C terminal D7A46_02930 PF00529 HlyD membrane-fusion protein of T1SS D7A46_02930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_02935 PF00873 AcrB/AcrD/AcrF family D7A46_02940 PF02321 Outer membrane efflux protein D7A46_02945 PF12146 Serine aminopeptidase, S33 D7A46_02950 PF00743 Flavin-binding monooxygenase-like D7A46_02955 PF01593 Flavin containing amine oxidoreductase D7A46_02970 PF01266 FAD dependent oxidoreductase D7A46_02990 PF16970 Type-1 fimbrial protein, A D7A46_03000 PF02753 Pili assembly chaperone PapD, C-terminal domain D7A46_03000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D7A46_03005 PF00577 Outer membrane usher protein D7A46_03005 PF13953 PapC C-terminal domain D7A46_03005 PF13954 PapC N-terminal domain D7A46_03010 PF00419 Fimbrial protein D7A46_03020 PF00107 Zinc-binding dehydrogenase D7A46_03020 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_03030 PF00199 Catalase D7A46_03045 PF13091 PLD-like domain D7A46_03065 PF01244 Membrane dipeptidase (Peptidase family M19) D7A46_03070 PF04055 Radical SAM superfamily D7A46_03070 PF13186 Iron-sulfur cluster-binding domain D7A46_03075 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D7A46_03080 PF03070 TENA/THI-4/PQQC family D7A46_03085 PF12706 Beta-lactamase superfamily domain D7A46_03090 PF08042 PqqA family D7A46_03095 PF02503 Polyphosphate kinase middle domain D7A46_03095 PF13090 Polyphosphate kinase C-terminal domain 2 D7A46_03095 PF17941 Polyphosphate kinase C-terminal domain 1 D7A46_03095 PF13089 Polyphosphate kinase N-terminal domain D7A46_03100 PF00149 Calcineurin-like phosphoesterase D7A46_03110 PF00550 Phosphopantetheine attachment site D7A46_03110 PF00857 Isochorismatase family D7A46_03115 PF00106 short chain dehydrogenase D7A46_03120 PF00005 ABC transporter D7A46_03120 PF03459 TOBE domain D7A46_03125 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_03135 PF03459 TOBE domain D7A46_03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_03140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D7A46_03140 PF00355 Rieske [2Fe-2S] domain D7A46_03145 PF00866 Ring hydroxylating beta subunit D7A46_03150 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_03150 PF00970 Oxidoreductase FAD-binding domain D7A46_03150 PF00175 Oxidoreductase NAD-binding domain D7A46_03155 PF14525 AraC-binding-like domain D7A46_03155 PF12833 Helix-turn-helix domain D7A46_03165 PF01613 Flavin reductase like domain D7A46_03180 PF01738 Dienelactone hydrolase family D7A46_03190 PF06719 AraC-type transcriptional regulator N-terminus D7A46_03190 PF12833 Helix-turn-helix domain D7A46_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_03215 PF03466 LysR substrate binding domain D7A46_03220 PF01144 Coenzyme A transferase D7A46_03225 PF01144 Coenzyme A transferase D7A46_03230 PF02667 Short chain fatty acid transporter D7A46_03235 PF02803 Thiolase, C-terminal domain D7A46_03235 PF00108 Thiolase, N-terminal domain D7A46_03240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_03240 PF03466 LysR substrate binding domain D7A46_03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_03245 PF03466 LysR substrate binding domain D7A46_03260 PF00206 Lyase D7A46_03260 PF10415 Fumarase C C-terminus D7A46_03265 PF07715 TonB-dependent Receptor Plug Domain D7A46_03265 PF00593 TonB dependent receptor D7A46_03270 PF00083 Sugar (and other) transporter D7A46_03285 PF00005 ABC transporter D7A46_03290 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_03295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D7A46_03320 PF02525 Flavodoxin-like fold D7A46_03325 PF01638 HxlR-like helix-turn-helix D7A46_03330 PF06445 GyrI-like small molecule binding domain D7A46_03330 PF12833 Helix-turn-helix domain D7A46_03345 PF01925 Sulfite exporter TauE/SafE D7A46_03350 PF04273 Putative phosphatase (DUF442) D7A46_03350 PF00753 Metallo-beta-lactamase superfamily D7A46_03355 PF04273 Putative phosphatase (DUF442) D7A46_03355 PF00753 Metallo-beta-lactamase superfamily D7A46_03360 PF00072 Response regulator receiver domain D7A46_03360 PF00158 Sigma-54 interaction domain D7A46_03360 PF02954 Bacterial regulatory protein, Fis family D7A46_03365 PF01062 Bestrophin, RFP-TM, chloride channel D7A46_03370 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_03370 PF00107 Zinc-binding dehydrogenase D7A46_03375 PF00106 short chain dehydrogenase D7A46_03380 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_03380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D7A46_03385 PF00364 Biotin-requiring enzyme D7A46_03385 PF02817 e3 binding domain D7A46_03385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D7A46_03390 PF02780 Transketolase, C-terminal domain D7A46_03390 PF02779 Transketolase, pyrimidine binding domain D7A46_03395 PF00676 Dehydrogenase E1 component D7A46_03400 PF04055 Radical SAM superfamily D7A46_03415 PF08448 PAS fold D7A46_03415 PF00990 Diguanylate cyclase, GGDEF domain D7A46_03420 PF01264 Chorismate synthase D7A46_03425 PF05175 Methyltransferase small domain D7A46_03430 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_03440 PF17862 AAA+ lid domain D7A46_03440 PF01434 Peptidase family M41 D7A46_03440 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_03450 PF05166 YcgL domain D7A46_03470 PF00570 HRDC domain D7A46_03470 PF01612 3'-5' exonuclease D7A46_03475 PF13662 Toprim domain D7A46_03475 PF02132 RecR protein D7A46_03480 PF02575 YbaB/EbfC DNA-binding family D7A46_03490 PF01053 Cys/Met metabolism PLP-dependent enzyme D7A46_03495 PF00561 alpha/beta hydrolase fold D7A46_03500 PF08241 Methyltransferase domain D7A46_03530 PF01230 HIT domain D7A46_03565 PF00005 ABC transporter D7A46_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_03580 PF02684 Lipid-A-disaccharide synthetase D7A46_03585 PF00593 TonB dependent receptor D7A46_03585 PF07715 TonB-dependent Receptor Plug Domain D7A46_03605 PF01925 Sulfite exporter TauE/SafE D7A46_03610 PF00793 DAHP synthetase I family D7A46_03615 PF02654 Cobalamin-5-phosphate synthase D7A46_03630 PF02277 Phosphoribosyltransferase D7A46_03635 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D7A46_03675 PF00593 TonB dependent receptor D7A46_03675 PF07715 TonB-dependent Receptor Plug Domain D7A46_03690 PF06276 Ferric iron reductase FhuF-like transporter D7A46_03690 PF04183 IucA / IucC family D7A46_03695 PF04183 IucA / IucC family D7A46_03695 PF06276 Ferric iron reductase FhuF-like transporter D7A46_03700 PF07690 Major Facilitator Superfamily D7A46_03705 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D7A46_03710 PF04183 IucA / IucC family D7A46_03710 PF06276 Ferric iron reductase FhuF-like transporter D7A46_03715 PF04073 Aminoacyl-tRNA editing domain D7A46_03725 PF03109 ABC1 family D7A46_03730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_03730 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_03730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_03735 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_03735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_03735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_03740 PF00487 Fatty acid desaturase D7A46_03745 PF12852 Cupin D7A46_03745 PF12833 Helix-turn-helix domain D7A46_03750 PF00639 PPIC-type PPIASE domain D7A46_03750 PF09312 SurA N-terminal domain D7A46_03755 PF00216 Bacterial DNA-binding protein D7A46_03770 PF02082 Transcriptional regulator D7A46_03775 PF00266 Aminotransferase class-V D7A46_03780 PF01592 NifU-like N terminal domain D7A46_03785 PF01521 Iron-sulphur cluster biosynthesis D7A46_03790 PF07743 HSCB C-terminal oligomerisation domain D7A46_03790 PF00226 DnaJ domain D7A46_03795 PF00012 Hsp70 protein D7A46_03800 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_03805 PF00211 Adenylate and Guanylate cyclase catalytic domain D7A46_03815 PF02559 CarD-like/TRCF domain D7A46_03815 PF17757 UvrB interaction domain D7A46_03815 PF00271 Helicase conserved C-terminal domain D7A46_03815 PF03461 TRCF domain D7A46_03815 PF00270 DEAD/DEAH box helicase D7A46_03835 PF03737 Aldolase/RraA D7A46_03840 PF13460 NAD(P)H-binding D7A46_03845 PF01649 Ribosomal protein S20 D7A46_03855 PF00459 Inositol monophosphatase family D7A46_03870 PF00005 ABC transporter D7A46_03870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D7A46_03875 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_03880 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_03885 PF01432 Peptidase family M3 D7A46_03905 PF00593 TonB dependent receptor D7A46_03905 PF07715 TonB-dependent Receptor Plug Domain D7A46_03915 PF01618 MotA/TolQ/ExbB proton channel family D7A46_03920 PF02472 Biopolymer transport protein ExbD/TolR D7A46_03925 PF02472 Biopolymer transport protein ExbD/TolR D7A46_03935 PF01274 Malate synthase D7A46_03940 PF03969 AFG1-like ATPase D7A46_03950 PF00743 Flavin-binding monooxygenase-like D7A46_03960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D7A46_03970 PF00216 Bacterial DNA-binding protein D7A46_03975 PF00575 S1 RNA binding domain D7A46_03980 PF02224 Cytidylate kinase D7A46_03990 PF14437 MafB19-like deaminase D7A46_04000 PF03167 Uracil DNA glycosylase superfamily D7A46_04010 PF03934 Type II secretion system (T2SS), protein K D7A46_04015 PF11612 Type II secretion system (T2SS), protein J D7A46_04015 PF07963 Prokaryotic N-terminal methylation motif D7A46_04020 PF02501 Type II secretion system (T2SS), protein I D7A46_04020 PF07963 Prokaryotic N-terminal methylation motif D7A46_04035 PF01026 TatD related DNase D7A46_04045 PF09115 DNA polymerase III, delta subunit, C terminal D7A46_04050 PF02348 Cytidylyltransferase D7A46_04055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D7A46_04060 PF00005 ABC transporter D7A46_04060 PF00664 ABC transporter transmembrane region D7A46_04070 PF01618 MotA/TolQ/ExbB proton channel family D7A46_04075 PF02195 ParB-like nuclease domain D7A46_04075 PF17762 HTH domain found in ParB protein D7A46_04080 PF13614 AAA domain D7A46_04085 PF02527 rRNA small subunit methyltransferase G D7A46_04090 PF00483 Nucleotidyl transferase D7A46_04095 PF01636 Phosphotransferase enzyme family D7A46_04100 PF04453 LPS transport system D D7A46_04100 PF03968 OstA-like protein D7A46_04105 PF00639 PPIC-type PPIASE domain D7A46_04105 PF09312 SurA N-terminal domain D7A46_04110 PF01116 Fructose-bisphosphate aldolase class-II D7A46_04120 PF00162 Phosphoglycerate kinase D7A46_04130 PF02545 Maf-like protein D7A46_04135 PF08007 Cupin superfamily protein D7A46_04155 PF00375 Sodium:dicarboxylate symporter family D7A46_04160 PF06912 Protein of unknown function (DUF1275) D7A46_04165 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D7A46_04170 PF00005 ABC transporter D7A46_04170 PF00664 ABC transporter transmembrane region D7A46_04180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D7A46_04180 PF12833 Helix-turn-helix domain D7A46_04185 PF01597 Glycine cleavage H-protein D7A46_04190 PF02146 Sir2 family D7A46_04195 PF00474 Sodium:solute symporter family D7A46_04200 PF01037 Lrp/AsnC ligand binding domain D7A46_04205 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D7A46_04205 PF00171 Aldehyde dehydrogenase family D7A46_04205 PF01619 Proline dehydrogenase D7A46_04205 PF14850 DNA-binding domain of Proline dehydrogenase D7A46_04210 PF04229 GrpB protein D7A46_04215 PF05958 tRNA (Uracil-5-)-methyltransferase D7A46_04225 PF09992 Phosphodiester glycosidase D7A46_04235 PF04264 YceI-like domain D7A46_04245 PF00456 Transketolase, thiamine diphosphate binding domain D7A46_04245 PF02780 Transketolase, C-terminal domain D7A46_04245 PF02779 Transketolase, pyrimidine binding domain D7A46_04250 PF02773 S-adenosylmethionine synthetase, C-terminal domain D7A46_04250 PF02772 S-adenosylmethionine synthetase, central domain D7A46_04250 PF00438 S-adenosylmethionine synthetase, N-terminal domain D7A46_04270 PF00905 Penicillin binding protein transpeptidase domain D7A46_04285 PF02075 Crossover junction endodeoxyribonuclease RuvC D7A46_04290 PF01256 Carbohydrate kinase D7A46_04290 PF03853 YjeF-related protein N-terminus D7A46_04295 PF08331 Domain of unknown function (DUF1730) D7A46_04300 PF06968 Biotin and Thiamin Synthesis associated domain D7A46_04300 PF04055 Radical SAM superfamily D7A46_04315 PF16970 Type-1 fimbrial protein, A D7A46_04320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D7A46_04320 PF02753 Pili assembly chaperone PapD, C-terminal domain D7A46_04325 PF13954 PapC N-terminal domain D7A46_04325 PF13953 PapC C-terminal domain D7A46_04325 PF00577 Outer membrane usher protein D7A46_04350 PF00892 EamA-like transporter family D7A46_04360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D7A46_04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04370 PF03466 LysR substrate binding domain D7A46_04390 PF00440 Bacterial regulatory proteins, tetR family D7A46_04400 PF01709 Transcriptional regulator D7A46_04405 PF01037 Lrp/AsnC ligand binding domain D7A46_04415 PF00005 ABC transporter D7A46_04420 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04425 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04440 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D7A46_04440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_04450 PF00296 Luciferase-like monooxygenase D7A46_04455 PF03180 NLPA lipoprotein D7A46_04460 PF03180 NLPA lipoprotein D7A46_04465 PF00005 ABC transporter D7A46_04465 PF09383 NIL domain D7A46_04470 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04475 PF01926 50S ribosome-binding GTPase D7A46_04475 PF06071 Protein of unknown function (DUF933) D7A46_04500 PF03591 AzlC protein D7A46_04505 PF05437 Branched-chain amino acid transport protein (AzlD) D7A46_04515 PF02222 ATP-grasp domain D7A46_04520 PF08335 GlnD PII-uridylyltransferase D7A46_04520 PF01966 HD domain D7A46_04520 PF01909 Nucleotidyltransferase domain D7A46_04525 PF00155 Aminotransferase class I and II D7A46_04535 PF12833 Helix-turn-helix domain D7A46_04535 PF12852 Cupin D7A46_04540 PF00255 Glutathione peroxidase D7A46_04545 PF01641 SelR domain D7A46_04550 PF00155 Aminotransferase class I and II D7A46_04555 PF00375 Sodium:dicarboxylate symporter family D7A46_04560 PF17763 Glutaminase/Asparaginase C-terminal domain D7A46_04560 PF00710 Asparaginase, N-terminal D7A46_04565 PF07733 Bacterial DNA polymerase III alpha NTPase domain D7A46_04565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D7A46_04565 PF02811 PHP domain D7A46_04565 PF01336 OB-fold nucleic acid binding domain D7A46_04565 PF14579 Helix-hairpin-helix motif D7A46_04570 PF00588 SpoU rRNA Methylase family D7A46_04575 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_04590 PF13192 Thioredoxin domain D7A46_04590 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04605 PF03466 LysR substrate binding domain D7A46_04610 PF01758 Sodium Bile acid symporter family D7A46_04615 PF01022 Bacterial regulatory protein, arsR family D7A46_04620 PF03960 ArsC family D7A46_04630 PF01979 Amidohydrolase family D7A46_04630 PF13382 Adenine deaminase C-terminal domain D7A46_04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04640 PF03466 LysR substrate binding domain D7A46_04650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D7A46_04655 PF01177 Asp/Glu/Hydantoin racemase D7A46_04660 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D7A46_04665 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04670 PF00005 ABC transporter D7A46_04675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D7A46_04685 PF00083 Sugar (and other) transporter D7A46_04690 PF00296 Luciferase-like monooxygenase D7A46_04695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_04695 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_04695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D7A46_04710 PF01654 Cytochrome bd terminal oxidase subunit I D7A46_04715 PF02322 Cytochrome bd terminal oxidase subunit II D7A46_04725 PF00392 Bacterial regulatory proteins, gntR family D7A46_04725 PF00155 Aminotransferase class I and II D7A46_04730 PF03466 LysR substrate binding domain D7A46_04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04745 PF00698 Acyl transferase domain D7A46_04750 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG D7A46_04760 PF01039 Carboxyl transferase domain D7A46_04765 PF06857 Malonate decarboxylase delta subunit (MdcD) D7A46_04770 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D7A46_04775 PF16957 Malonate decarboxylase, alpha subunit, transporter D7A46_04780 PF07690 Major Facilitator Superfamily D7A46_04795 PF00392 Bacterial regulatory proteins, gntR family D7A46_04795 PF00155 Aminotransferase class I and II D7A46_04800 PF04172 LrgB-like family D7A46_04805 PF03788 LrgA family D7A46_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04810 PF03466 LysR substrate binding domain D7A46_04815 PF14834 Glutathione S-transferase, C-terminal domain D7A46_04815 PF02798 Glutathione S-transferase, N-terminal domain D7A46_04820 PF02798 Glutathione S-transferase, N-terminal domain D7A46_04825 PF03466 LysR substrate binding domain D7A46_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04835 PF00581 Rhodanese-like domain D7A46_04840 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_04850 PF00266 Aminotransferase class-V D7A46_04860 PF01810 LysE type translocator D7A46_04865 PF03466 LysR substrate binding domain D7A46_04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_04875 PF00497 Bacterial extracellular solute-binding proteins, family 3 D7A46_04880 PF00497 Bacterial extracellular solute-binding proteins, family 3 D7A46_04885 PF00005 ABC transporter D7A46_04890 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04895 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_04910 PF00072 Response regulator receiver domain D7A46_04915 PF00072 Response regulator receiver domain D7A46_04915 PF09308 LuxQ, periplasmic D7A46_04915 PF00512 His Kinase A (phospho-acceptor) domain D7A46_04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_04925 PF01037 Lrp/AsnC ligand binding domain D7A46_04925 PF13404 AsnC-type helix-turn-helix domain D7A46_04935 PF00717 Peptidase S24-like D7A46_04960 PF18011 C-terminal domain found in long catalases D7A46_04960 PF06628 Catalase-related immune-responsive D7A46_04960 PF00199 Catalase D7A46_04970 PF02464 Competence-damaged protein D7A46_04970 PF18146 Damage-inducible protein CinA KH domain D7A46_04970 PF00994 Probable molybdopterin binding domain D7A46_05000 PF03466 LysR substrate binding domain D7A46_05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_05020 PF00501 AMP-binding enzyme D7A46_05020 PF13193 AMP-binding enzyme C-terminal domain D7A46_05025 PF00440 Bacterial regulatory proteins, tetR family D7A46_05030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_05030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_05030 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_05035 PF01039 Carboxyl transferase domain D7A46_05040 PF00378 Enoyl-CoA hydratase/isomerase D7A46_05045 PF02785 Biotin carboxylase C-terminal domain D7A46_05045 PF00364 Biotin-requiring enzyme D7A46_05045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_05045 PF00289 Biotin carboxylase, N-terminal domain D7A46_05050 PF00682 HMGL-like D7A46_05055 PF03466 LysR substrate binding domain D7A46_05055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_05070 PF12806 Acetyl-CoA dehydrogenase C-terminal like D7A46_05070 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_05070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_05070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_05080 PF07690 Major Facilitator Superfamily D7A46_05090 PF01144 Coenzyme A transferase D7A46_05095 PF01144 Coenzyme A transferase D7A46_05100 PF07690 Major Facilitator Superfamily D7A46_05105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_05105 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_05105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_05110 PF00378 Enoyl-CoA hydratase/isomerase D7A46_05120 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D7A46_05120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D7A46_05120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D7A46_05125 PF02803 Thiolase, C-terminal domain D7A46_05125 PF00108 Thiolase, N-terminal domain D7A46_05130 PF09339 IclR helix-turn-helix domain D7A46_05135 PF07690 Major Facilitator Superfamily D7A46_05140 PF03060 Nitronate monooxygenase D7A46_05145 PF00378 Enoyl-CoA hydratase/isomerase D7A46_05150 PF09339 IclR helix-turn-helix domain D7A46_05155 PF02515 CoA-transferase family III D7A46_05160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_05160 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_05160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_05165 PF07690 Major Facilitator Superfamily D7A46_05170 PF13419 Haloacid dehalogenase-like hydrolase D7A46_05175 PF00266 Aminotransferase class-V D7A46_05180 PF01266 FAD dependent oxidoreductase D7A46_05185 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_05190 PF00005 ABC transporter D7A46_05190 PF08402 TOBE domain D7A46_05200 PF00392 Bacterial regulatory proteins, gntR family D7A46_05200 PF07702 UTRA domain D7A46_05205 PF01494 FAD binding domain D7A46_05210 PF01614 Bacterial transcriptional regulator D7A46_05210 PF09339 IclR helix-turn-helix domain D7A46_05215 PF02525 Flavodoxin-like fold D7A46_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_05220 PF03466 LysR substrate binding domain D7A46_05225 PF02627 Carboxymuconolactone decarboxylase family D7A46_05230 PF00171 Aldehyde dehydrogenase family D7A46_05240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D7A46_05250 PF00171 Aldehyde dehydrogenase family D7A46_05255 PF00296 Luciferase-like monooxygenase D7A46_05260 PF01613 Flavin reductase like domain D7A46_05265 PF12697 Alpha/beta hydrolase family D7A46_05285 PF01292 Prokaryotic cytochrome b561 D7A46_05290 PF00199 Catalase D7A46_05330 PF03061 Thioesterase superfamily D7A46_05335 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_05340 PF07848 PaaX-like protein D7A46_05340 PF08223 PaaX-like protein C-terminal domain D7A46_05345 PF00501 AMP-binding enzyme D7A46_05345 PF14535 AMP-binding enzyme C-terminal domain D7A46_05350 PF02803 Thiolase, C-terminal domain D7A46_05350 PF00108 Thiolase, N-terminal domain D7A46_05355 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D7A46_05355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D7A46_05355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D7A46_05360 PF00378 Enoyl-CoA hydratase/isomerase D7A46_05365 PF00378 Enoyl-CoA hydratase/isomerase D7A46_05370 PF00175 Oxidoreductase NAD-binding domain D7A46_05370 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_05370 PF00970 Oxidoreductase FAD-binding domain D7A46_05375 PF01883 Iron-sulfur cluster assembly protein D7A46_05380 PF05138 Phenylacetic acid catabolic protein D7A46_05385 PF06243 Phenylacetic acid degradation B D7A46_05390 PF05138 Phenylacetic acid catabolic protein D7A46_05395 PF00171 Aldehyde dehydrogenase family D7A46_05395 PF01575 MaoC like domain D7A46_05400 PF03315 Serine dehydratase beta chain D7A46_05400 PF03313 Serine dehydratase alpha chain D7A46_05405 PF13520 Amino acid permease D7A46_05410 PF00171 Aldehyde dehydrogenase family D7A46_05415 PF00083 Sugar (and other) transporter D7A46_05425 PF04324 BFD-like [2Fe-2S] binding domain D7A46_05425 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_05435 PF01266 FAD dependent oxidoreductase D7A46_05440 PF05544 Proline racemase D7A46_05445 PF00392 Bacterial regulatory proteins, gntR family D7A46_05455 PF00701 Dihydrodipicolinate synthetase family D7A46_05470 PF09278 MerR, DNA binding D7A46_05470 PF00376 MerR family regulatory protein D7A46_05485 PF02677 Epoxyqueuosine reductase QueH D7A46_05500 PF07690 Major Facilitator Superfamily D7A46_05505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D7A46_05515 PF03466 LysR substrate binding domain D7A46_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_05545 PF17871 AAA lid domain D7A46_05545 PF07724 AAA domain (Cdc48 subfamily) D7A46_05545 PF10431 C-terminal, D2-small domain, of ClpB protein D7A46_05545 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_05555 PF01389 OmpA-like transmembrane domain D7A46_05555 PF00691 OmpA family D7A46_05625 PF00005 ABC transporter D7A46_05630 PF00497 Bacterial extracellular solute-binding proteins, family 3 D7A46_05635 PF01425 Amidase D7A46_05640 PF01402 Ribbon-helix-helix protein, copG family D7A46_05640 PF08753 NikR C terminal nickel binding domain D7A46_05660 PF02525 Flavodoxin-like fold D7A46_05665 PF00289 Biotin carboxylase, N-terminal domain D7A46_05665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_05665 PF02785 Biotin carboxylase C-terminal domain D7A46_05680 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_05680 PF13823 Alcohol dehydrogenase GroES-associated D7A46_05680 PF00107 Zinc-binding dehydrogenase D7A46_05690 PF00440 Bacterial regulatory proteins, tetR family D7A46_05715 PF00654 Voltage gated chloride channel D7A46_05720 PF02785 Biotin carboxylase C-terminal domain D7A46_05720 PF00289 Biotin carboxylase, N-terminal domain D7A46_05720 PF00364 Biotin-requiring enzyme D7A46_05720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_05730 PF07286 Protein of unknown function (DUF1445) D7A46_05735 PF03746 LamB/YcsF family D7A46_05740 PF01566 Natural resistance-associated macrophage protein D7A46_05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_05745 PF03466 LysR substrate binding domain D7A46_05760 PF03527 RHS protein D7A46_05760 PF05593 RHS Repeat D7A46_05760 PF14220 Domain of unknown function (DUF4329) D7A46_05765 PF04717 Type VI secretion system, phage-baseplate injector D7A46_05765 PF16671 Actin cross-linking domain D7A46_05780 PF13419 Haloacid dehalogenase-like hydrolase D7A46_05800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D7A46_05800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D7A46_05820 PF07690 Major Facilitator Superfamily D7A46_05835 PF03279 Bacterial lipid A biosynthesis acyltransferase D7A46_05840 PF00990 Diguanylate cyclase, GGDEF domain D7A46_05840 PF00563 EAL domain D7A46_05840 PF03707 Bacterial signalling protein N terminal repeat D7A46_05845 PF00892 EamA-like transporter family D7A46_05850 PF01037 Lrp/AsnC ligand binding domain D7A46_05855 PF01624 MutS domain I D7A46_05855 PF05188 MutS domain II D7A46_05855 PF05192 MutS domain III D7A46_05855 PF05190 MutS family domain IV D7A46_05855 PF00488 MutS domain V D7A46_05865 PF11953 Domain of unknown function (DUF3470) D7A46_05865 PF00037 4Fe-4S binding domain D7A46_05875 PF01596 O-methyltransferase D7A46_05885 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_05890 PF01205 Uncharacterized protein family UPF0029 D7A46_05900 PF03412 Peptidase C39 family D7A46_05900 PF00005 ABC transporter D7A46_05900 PF00664 ABC transporter transmembrane region D7A46_05905 PF02321 Outer membrane efflux protein D7A46_05910 PF00005 ABC transporter D7A46_05910 PF12399 Branched-chain amino acid ATP-binding cassette transporter D7A46_05915 PF03968 OstA-like protein D7A46_05930 PF00571 CBS domain D7A46_05930 PF01380 SIS domain D7A46_05935 PF01406 tRNA synthetases class I (C) catalytic domain D7A46_05935 PF09190 DALR domain D7A46_05965 PF01638 HxlR-like helix-turn-helix D7A46_05970 PF07690 Major Facilitator Superfamily D7A46_06000 PF14748 Pyrroline-5-carboxylate reductase dimerisation D7A46_06000 PF03807 NADP oxidoreductase coenzyme F420-dependent D7A46_06010 PF00313 'Cold-shock' DNA-binding domain D7A46_06015 PF01810 LysE type translocator D7A46_06050 PF13742 OB-fold nucleic acid binding domain D7A46_06050 PF02601 Exonuclease VII, large subunit D7A46_06090 PF09278 MerR, DNA binding D7A46_06090 PF00376 MerR family regulatory protein D7A46_06095 PF00403 Heavy-metal-associated domain D7A46_06105 PF03466 LysR substrate binding domain D7A46_06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_06110 PF00355 Rieske [2Fe-2S] domain D7A46_06110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D7A46_06115 PF00866 Ring hydroxylating beta subunit D7A46_06120 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_06120 PF00970 Oxidoreductase FAD-binding domain D7A46_06120 PF00175 Oxidoreductase NAD-binding domain D7A46_06125 PF00106 short chain dehydrogenase D7A46_06130 PF03594 Benzoate membrane transport protein D7A46_06135 PF07690 Major Facilitator Superfamily D7A46_06145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D7A46_06145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D7A46_06150 PF04408 Helicase associated domain (HA2) D7A46_06150 PF11898 Domain of unknown function (DUF3418) D7A46_06150 PF00271 Helicase conserved C-terminal domain D7A46_06150 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D7A46_06150 PF00270 DEAD/DEAH box helicase D7A46_06155 PF00578 AhpC/TSA family D7A46_06155 PF10417 C-terminal domain of 1-Cys peroxiredoxin D7A46_06175 PF13192 Thioredoxin domain D7A46_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_06185 PF00043 Glutathione S-transferase, C-terminal domain D7A46_06185 PF02798 Glutathione S-transferase, N-terminal domain D7A46_06195 PF02390 Putative methyltransferase D7A46_06200 PF13417 Glutathione S-transferase, N-terminal domain D7A46_06200 PF00043 Glutathione S-transferase, C-terminal domain D7A46_06210 PF00691 OmpA family D7A46_06210 PF13488 Glycine zipper D7A46_06215 PF01979 Amidohydrolase family D7A46_06220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D7A46_06220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D7A46_06230 PF01170 Putative RNA methylase family UPF0020 D7A46_06230 PF02926 THUMP domain D7A46_06230 PF10672 S-adenosylmethionine-dependent methyltransferase D7A46_06245 PF10431 C-terminal, D2-small domain, of ClpB protein D7A46_06245 PF02861 Clp amino terminal domain, pathogenicity island component D7A46_06245 PF17871 AAA lid domain D7A46_06245 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_06245 PF07724 AAA domain (Cdc48 subfamily) D7A46_06260 PF02566 OsmC-like protein D7A46_06265 PF13545 Crp-like helix-turn-helix domain D7A46_06265 PF00027 Cyclic nucleotide-binding domain D7A46_06280 PF13610 DDE domain D7A46_06305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D7A46_06310 PF13610 DDE domain D7A46_06330 PF13610 DDE domain D7A46_06340 PF13610 DDE domain D7A46_06365 PF00709 Adenylosuccinate synthetase D7A46_06370 PF13393 Histidyl-tRNA synthetase D7A46_06375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D7A46_06375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D7A46_06380 PF01411 tRNA synthetases class II (A) D7A46_06380 PF02272 DHHA1 domain D7A46_06380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D7A46_06385 PF01842 ACT domain D7A46_06385 PF00696 Amino acid kinase family D7A46_06385 PF13840 ACT domain D7A46_06390 PF02599 Global regulator protein family D7A46_06395 PF01351 Ribonuclease HII D7A46_06405 PF01292 Prokaryotic cytochrome b561 D7A46_06410 PF00962 Adenosine/AMP deaminase D7A46_06415 PF00860 Permease family D7A46_06425 PF00743 Flavin-binding monooxygenase-like D7A46_06430 PF00106 short chain dehydrogenase D7A46_06440 PF02678 Pirin D7A46_06440 PF17954 Quercetinase C-terminal cupin domain D7A46_06445 PF17932 Tetracyclin repressor-like, C-terminal domain D7A46_06445 PF00440 Bacterial regulatory proteins, tetR family D7A46_06455 PF13610 DDE domain D7A46_06470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_06470 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_06475 PF00764 Arginosuccinate synthase D7A46_06480 PF00563 EAL domain D7A46_06480 PF01590 GAF domain D7A46_06480 PF00360 Phytochrome region D7A46_06480 PF00990 Diguanylate cyclase, GGDEF domain D7A46_06485 PF01979 Amidohydrolase family D7A46_06490 PF00929 Exonuclease D7A46_06500 PF07715 TonB-dependent Receptor Plug Domain D7A46_06500 PF00593 TonB dependent receptor D7A46_06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_06505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_06510 PF00005 ABC transporter D7A46_06510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D7A46_06515 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_06515 PF12911 N-terminal TM domain of oligopeptide transport permease C D7A46_06520 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_06525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D7A46_06530 PF01464 Transglycosylase SLT domain D7A46_06530 PF01476 LysM domain D7A46_06530 PF01476 LysM domain D7A46_06530 PF01464 Transglycosylase SLT domain D7A46_06535 PF00929 Exonuclease D7A46_06545 PF00293 NUDIX domain D7A46_06545 PF09297 NADH pyrophosphatase zinc ribbon domain D7A46_06555 PF04972 BON domain D7A46_06560 PF02021 Uncharacterised protein family UPF0102 D7A46_06565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D7A46_06575 PF03466 LysR substrate binding domain D7A46_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_06580 PF01810 LysE type translocator D7A46_06590 PF13411 MerR HTH family regulatory protein D7A46_06600 PF01494 FAD binding domain D7A46_06605 PF01494 FAD binding domain D7A46_06610 PF00557 Metallopeptidase family M24 D7A46_06610 PF05195 Aminopeptidase P, N-terminal domain D7A46_06645 PF08019 Phosphoethanolamine transferase EptA/EptB D7A46_06645 PF00884 Sulfatase D7A46_06690 PF08525 Opacity-associated protein A N-terminal motif D7A46_06690 PF01551 Peptidase family M23 D7A46_06690 PF01476 LysM domain D7A46_07020 PF01812 5-formyltetrahydrofolate cyclo-ligase family D7A46_07030 PF05662 Coiled stalk of trimeric autotransporter adhesin D7A46_07030 PF05658 Head domain of trimeric autotransporter adhesin D7A46_07030 PF03895 YadA-like membrane anchor domain D7A46_07030 PF13018 Extended Signal Peptide of Type V secretion system D7A46_07035 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_07035 PF05362 Lon protease (S16) C-terminal proteolytic domain D7A46_07035 PF02190 ATP-dependent protease La (LON) substrate-binding domain D7A46_07040 PF02590 Predicted SPOUT methyltransferase D7A46_07045 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D7A46_07055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D7A46_07055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D7A46_07060 PF04060 Putative Fe-S cluster D7A46_07065 PF00633 Helix-hairpin-helix motif D7A46_07065 PF00730 HhH-GPD superfamily base excision DNA repair protein D7A46_07065 PF10576 Iron-sulfur binding domain of endonuclease III D7A46_07075 PF05191 Adenylate kinase, active site lid D7A46_07090 PF03717 Penicillin-binding Protein dimerisation domain D7A46_07090 PF00905 Penicillin binding protein transpeptidase domain D7A46_07105 PF02492 CobW/HypB/UreG, nucleotide-binding domain D7A46_07110 PF01730 UreF D7A46_07115 PF02814 UreE urease accessory protein, N-terminal domain D7A46_07115 PF05194 UreE urease accessory protein, C-terminal domain D7A46_07120 PF01979 Amidohydrolase family D7A46_07120 PF00449 Urease alpha-subunit, N-terminal domain D7A46_07125 PF00699 Urease beta subunit D7A46_07130 PF00547 Urease, gamma subunit D7A46_07135 PF01774 UreD urease accessory protein D7A46_07150 PF00463 Isocitrate lyase family D7A46_07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_07155 PF03466 LysR substrate binding domain D7A46_07160 PF01595 Cyclin M transmembrane N-terminal domain D7A46_07160 PF00571 CBS domain D7A46_07160 PF03471 Transporter associated domain D7A46_07170 PF03600 Citrate transporter D7A46_07185 PF00009 Elongation factor Tu GTP binding domain D7A46_07190 PF01507 Phosphoadenosine phosphosulfate reductase family D7A46_07205 PF14052 Capsule assembly protein Wzi D7A46_07210 PF01336 OB-fold nucleic acid binding domain D7A46_07210 PF00152 tRNA synthetases class II (D, K and N) D7A46_07225 PF00301 Rubredoxin D7A46_07230 PF18113 Rubredoxin binding C-terminal domain D7A46_07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_07235 PF00561 alpha/beta hydrolase fold D7A46_07240 PF03466 LysR substrate binding domain D7A46_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_07250 PF13089 Polyphosphate kinase N-terminal domain D7A46_07250 PF02503 Polyphosphate kinase middle domain D7A46_07250 PF13090 Polyphosphate kinase C-terminal domain 2 D7A46_07250 PF17941 Polyphosphate kinase C-terminal domain 1 D7A46_07255 PF00912 Transglycosylase D7A46_07260 PF01694 Rhomboid family D7A46_07270 PF00005 ABC transporter D7A46_07275 PF13472 GDSL-like Lipase/Acylhydrolase family D7A46_07280 PF00484 Carbonic anhydrase D7A46_07285 PF00561 alpha/beta hydrolase fold D7A46_07295 PF07715 TonB-dependent Receptor Plug Domain D7A46_07295 PF00593 TonB dependent receptor D7A46_07300 PF01106 NifU-like domain D7A46_07300 PF01521 Iron-sulphur cluster biosynthesis D7A46_07310 PF00884 Sulfatase D7A46_07315 PF03781 Sulfatase-modifying factor enzyme 1 D7A46_07330 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_07335 PF01384 Phosphate transporter family D7A46_07340 PF00809 Pterin binding enzyme D7A46_07340 PF02310 B12 binding domain D7A46_07340 PF02965 Vitamin B12 dependent methionine synthase, activation domain D7A46_07340 PF02574 Homocysteine S-methyltransferase D7A46_07340 PF02607 B12 binding domain D7A46_07345 PF02780 Transketolase, C-terminal domain D7A46_07345 PF02779 Transketolase, pyrimidine binding domain D7A46_07350 PF00456 Transketolase, thiamine diphosphate binding domain D7A46_07355 PF07690 Major Facilitator Superfamily D7A46_07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_07365 PF03466 LysR substrate binding domain D7A46_07380 PF01263 Aldose 1-epimerase D7A46_07385 PF07690 Major Facilitator Superfamily D7A46_07390 PF12833 Helix-turn-helix domain D7A46_07390 PF02311 AraC-like ligand binding domain D7A46_07395 PF04960 Glutaminase D7A46_07400 PF01327 Polypeptide deformylase D7A46_07405 PF07690 Major Facilitator Superfamily D7A46_07415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D7A46_07415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D7A46_07415 PF00205 Thiamine pyrophosphate enzyme, central domain D7A46_07420 PF00171 Aldehyde dehydrogenase family D7A46_07425 PF01958 Domain of unknown function DUF108 D7A46_07425 PF03447 Homoserine dehydrogenase, NAD binding domain D7A46_07435 PF12697 Alpha/beta hydrolase family D7A46_07445 PF07690 Major Facilitator Superfamily D7A46_07450 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_07450 PF14759 Reductase C-terminal D7A46_07455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D7A46_07465 PF00355 Rieske [2Fe-2S] domain D7A46_07475 PF00355 Rieske [2Fe-2S] domain D7A46_07480 PF01614 Bacterial transcriptional regulator D7A46_07480 PF09339 IclR helix-turn-helix domain D7A46_07495 PF00378 Enoyl-CoA hydratase/isomerase D7A46_07505 PF00535 Glycosyl transferase family 2 D7A46_07510 PF01522 Polysaccharide deacetylase D7A46_07510 PF14883 Hypothetical glycosyl hydrolase family 13 D7A46_07515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D7A46_07520 PF07152 YaeQ protein D7A46_07525 PF00375 Sodium:dicarboxylate symporter family D7A46_07530 PF07683 Cobalamin synthesis protein cobW C-terminal domain D7A46_07530 PF02492 CobW/HypB/UreG, nucleotide-binding domain D7A46_07540 PF03061 Thioesterase superfamily D7A46_07550 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_07555 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_07560 PF00440 Bacterial regulatory proteins, tetR family D7A46_07560 PF13977 BetI-type transcriptional repressor, C-terminal D7A46_07565 PF00171 Aldehyde dehydrogenase family D7A46_07570 PF00732 GMC oxidoreductase D7A46_07570 PF05199 GMC oxidoreductase D7A46_07575 PF06039 Malate:quinone oxidoreductase (Mqo) D7A46_07585 PF02574 Homocysteine S-methyltransferase D7A46_07590 PF13520 Amino acid permease D7A46_07615 PF01126 Heme oxygenase D7A46_07635 PF00593 TonB dependent receptor D7A46_07635 PF07715 TonB-dependent Receptor Plug Domain D7A46_07645 PF04542 Sigma-70 region 2 D7A46_07645 PF08281 Sigma-70, region 4 D7A46_07655 PF00701 Dihydrodipicolinate synthetase family D7A46_07660 PF00083 Sugar (and other) transporter D7A46_07680 PF01026 TatD related DNase D7A46_07695 PF07693 KAP family P-loop domain D7A46_07770 PF00589 Phage integrase family D7A46_07770 PF13356 Arm DNA-binding domain D7A46_07865 PF02768 DNA polymerase III beta subunit, C-terminal domain D7A46_07865 PF00712 DNA polymerase III beta subunit, N-terminal domain D7A46_07865 PF02767 DNA polymerase III beta subunit, central domain D7A46_07905 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D7A46_08100 PF01695 IstB-like ATP binding protein D7A46_08110 PF00145 C-5 cytosine-specific DNA methylase D7A46_08190 PF00929 Exonuclease D7A46_08260 PF07690 Major Facilitator Superfamily D7A46_08265 PF13533 Biotin-lipoyl like D7A46_08270 PF03061 Thioesterase superfamily D7A46_08275 PF00490 Delta-aminolevulinic acid dehydratase D7A46_08280 PF01266 FAD dependent oxidoreductase D7A46_08285 PF01370 NAD dependent epimerase/dehydratase family D7A46_08285 PF08338 Domain of unknown function (DUF1731) D7A46_08305 PF00149 Calcineurin-like phosphoesterase D7A46_08305 PF12320 Type 5 capsule protein repressor C-terminal domain D7A46_08315 PF01168 Alanine racemase, N-terminal domain D7A46_08320 PF00437 Type II/IV secretion system protein D7A46_08325 PF00437 Type II/IV secretion system protein D7A46_08330 PF01475 Ferric uptake regulator family D7A46_08335 PF04355 SmpA / OmlA family D7A46_08340 PF03658 RnfH family Ubiquitin D7A46_08355 PF01814 Hemerythrin HHE cation binding domain D7A46_08360 PF13230 Glutamine amidotransferases class-II D7A46_08370 PF00696 Amino acid kinase family D7A46_08375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D7A46_08375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D7A46_08375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D7A46_08375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D7A46_08380 PF00692 dUTPase D7A46_08385 PF13361 UvrD-like helicase C-terminal domain D7A46_08385 PF00580 UvrD/REP helicase N-terminal domain D7A46_08390 PF13488 Glycine zipper D7A46_08390 PF00691 OmpA family D7A46_08395 PF01553 Acyltransferase D7A46_08405 PF03775 Septum formation inhibitor MinC, C-terminal domain D7A46_08410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D7A46_08415 PF03776 Septum formation topological specificity factor MinE D7A46_08430 PF01810 LysE type translocator D7A46_08435 PF17854 FtsK alpha domain D7A46_08435 PF09397 Ftsk gamma domain D7A46_08435 PF01580 FtsK/SpoIIIE family D7A46_08435 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D7A46_08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_08445 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D7A46_08450 PF04377 Arginine-tRNA-protein transferase, C terminus D7A46_08450 PF04376 Arginine-tRNA-protein transferase, N terminus D7A46_08455 PF00583 Acetyltransferase (GNAT) family D7A46_08470 PF03143 Elongation factor Tu C-terminal domain D7A46_08470 PF00009 Elongation factor Tu GTP binding domain D7A46_08470 PF03144 Elongation factor Tu domain 2 D7A46_08475 PF03144 Elongation factor Tu domain 2 D7A46_08475 PF14492 Elongation Factor G, domain II D7A46_08475 PF03764 Elongation factor G, domain IV D7A46_08475 PF00009 Elongation factor Tu GTP binding domain D7A46_08475 PF00679 Elongation factor G C-terminus D7A46_08480 PF00177 Ribosomal protein S7p/S5e D7A46_08485 PF00164 Ribosomal protein S12/S23 D7A46_08495 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_08495 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_08505 PF05726 Pirin C-terminal cupin domain D7A46_08505 PF02678 Pirin D7A46_08515 PF00795 Carbon-nitrogen hydrolase D7A46_08515 PF02540 NAD synthase D7A46_08530 PF00175 Oxidoreductase NAD-binding domain D7A46_08530 PF00970 Oxidoreductase FAD-binding domain D7A46_08530 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_08535 PF00171 Aldehyde dehydrogenase family D7A46_08540 PF00355 Rieske [2Fe-2S] domain D7A46_08540 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D7A46_08545 PF07859 alpha/beta hydrolase fold D7A46_08550 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_08555 PF00180 Isocitrate/isopropylmalate dehydrogenase D7A46_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_08560 PF03466 LysR substrate binding domain D7A46_08580 PF00037 4Fe-4S binding domain D7A46_08585 PF01467 Cytidylyltransferase-like D7A46_08590 PF01668 SmpB protein D7A46_08595 PF03358 NADPH-dependent FMN reductase D7A46_08605 PF00849 RNA pseudouridylate synthase D7A46_08605 PF01479 S4 domain D7A46_08610 PF13525 Outer membrane lipoprotein D7A46_08615 PF08275 DNA primase catalytic core, N-terminal domain D7A46_08615 PF01807 CHC2 zinc finger D7A46_08615 PF08278 DNA primase DnaG DnaB-binding D7A46_08615 PF10410 DnaB-helicase binding domain of primase D7A46_08620 PF01488 Shikimate / quinate 5-dehydrogenase D7A46_08620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D7A46_08620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D7A46_08630 PF03550 Outer membrane lipoprotein LolB D7A46_08635 PF00288 GHMP kinases N terminal domain D7A46_08635 PF08544 GHMP kinases C terminal D7A46_08660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D7A46_08660 PF14572 Phosphoribosyl synthetase-associated domain D7A46_08665 PF01386 Ribosomal L25p family D7A46_08670 PF01195 Peptidyl-tRNA hydrolase D7A46_08675 PF02261 Aspartate decarboxylase D7A46_08690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D7A46_08700 PF08543 Phosphomethylpyrimidine kinase D7A46_08700 PF03070 TENA/THI-4/PQQC family D7A46_08700 PF02581 Thiamine monophosphate synthase D7A46_08705 PF01476 LysM domain D7A46_08705 PF04972 BON domain D7A46_08710 PF00550 Phosphopantetheine attachment site D7A46_08720 PF00698 Acyl transferase domain D7A46_08725 PF01783 Ribosomal L32p protein family D7A46_08730 PF02620 Large ribosomal RNA subunit accumulation protein YceD D7A46_08735 PF04315 Elongation factor P hydroxylase D7A46_08740 PF01300 Telomere recombination D7A46_08745 PF02616 Segregation and condensation protein ScpA D7A46_08750 PF04079 Segregation and condensation complex subunit ScpB D7A46_08755 PF00849 RNA pseudouridylate synthase D7A46_08755 PF01479 S4 domain D7A46_08770 PF00155 Aminotransferase class I and II D7A46_08775 PF06968 Biotin and Thiamin Synthesis associated domain D7A46_08775 PF04055 Radical SAM superfamily D7A46_08775 PF00202 Aminotransferase class-III D7A46_08780 PF08241 Methyltransferase domain D7A46_08780 PF12697 Alpha/beta hydrolase family D7A46_08785 PF02358 Trehalose-phosphatase D7A46_08790 PF00982 Glycosyltransferase family 20 D7A46_08795 PF07690 Major Facilitator Superfamily D7A46_08800 PF00210 Ferritin-like domain D7A46_08805 PF01653 NAD-dependent DNA ligase adenylation domain D7A46_08805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D7A46_08805 PF12826 Helix-hairpin-helix motif D7A46_08805 PF00533 BRCA1 C Terminus (BRCT) domain D7A46_08805 PF03120 NAD-dependent DNA ligase OB-fold domain D7A46_08815 PF02463 RecF/RecN/SMC N terminal domain D7A46_08815 PF06470 SMC proteins Flexible Hinge Domain D7A46_08825 PF01925 Sulfite exporter TauE/SafE D7A46_08835 PF03309 Type III pantothenate kinase D7A46_08840 PF00448 SRP54-type protein, GTPase domain D7A46_08840 PF02881 SRP54-type protein, helical bundle domain D7A46_08840 PF02978 Signal peptide binding domain D7A46_08850 PF01207 Dihydrouridine synthase (Dus) D7A46_08885 PF00692 dUTPase D7A46_08910 PF10609 NUBPL iron-transfer P-loop NTPase D7A46_08920 PF01588 Putative tRNA binding domain D7A46_08920 PF09334 tRNA synthetases class I (M) D7A46_08945 PF13533 Biotin-lipoyl like D7A46_08950 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_08965 PF05552 Conserved TM helix D7A46_08980 PF00175 Oxidoreductase NAD-binding domain D7A46_08980 PF00970 Oxidoreductase FAD-binding domain D7A46_08985 PF03466 LysR substrate binding domain D7A46_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_08990 PF00313 'Cold-shock' DNA-binding domain D7A46_09000 PF00361 Proton-conducting membrane transporter D7A46_09005 PF00361 Proton-conducting membrane transporter D7A46_09010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D7A46_09010 PF00361 Proton-conducting membrane transporter D7A46_09015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D7A46_09020 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D7A46_09025 PF12838 4Fe-4S dicluster domain D7A46_09030 PF00146 NADH dehydrogenase D7A46_09035 PF00384 Molybdopterin oxidoreductase D7A46_09035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D7A46_09035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D7A46_09040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D7A46_09040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D7A46_09040 PF10531 SLBB domain D7A46_09050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D7A46_09050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D7A46_09055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D7A46_09060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D7A46_09065 PF00990 Diguanylate cyclase, GGDEF domain D7A46_09065 PF17151 Periplasmic sensor domain D7A46_09075 PF00672 HAMP domain D7A46_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_09075 PF00512 His Kinase A (phospho-acceptor) domain D7A46_09080 PF00486 Transcriptional regulatory protein, C terminal D7A46_09080 PF00072 Response regulator receiver domain D7A46_09090 PF00317 Ribonucleotide reductase, all-alpha domain D7A46_09090 PF02867 Ribonucleotide reductase, barrel domain D7A46_09090 PF03477 ATP cone domain D7A46_09100 PF00268 Ribonucleotide reductase, small chain D7A46_09110 PF00672 HAMP domain D7A46_09110 PF13756 Stimulus-sensing domain D7A46_09110 PF13755 Sensor N-terminal transmembrane domain D7A46_09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_09110 PF00512 His Kinase A (phospho-acceptor) domain D7A46_09180 PF01011 PQQ enzyme repeat D7A46_09180 PF13360 PQQ-like domain D7A46_09200 PF02567 Phenazine biosynthesis-like protein D7A46_09230 PF01613 Flavin reductase like domain D7A46_09235 PF08267 Cobalamin-independent synthase, N-terminal domain D7A46_09235 PF01717 Cobalamin-independent synthase, Catalytic domain D7A46_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_09245 PF03466 LysR substrate binding domain D7A46_09250 PF01810 LysE type translocator D7A46_09260 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D7A46_09260 PF12833 Helix-turn-helix domain D7A46_09265 PF07687 Peptidase dimerisation domain D7A46_09265 PF01546 Peptidase family M20/M25/M40 D7A46_09275 PF03466 LysR substrate binding domain D7A46_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_09285 PF07690 Major Facilitator Superfamily D7A46_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_09295 PF03466 LysR substrate binding domain D7A46_09300 PF14537 Cytochrome c3 D7A46_09300 PF00890 FAD binding domain D7A46_09310 PF02515 CoA-transferase family III D7A46_09315 PF07690 Major Facilitator Superfamily D7A46_09320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_09320 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_09320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_09325 PF03466 LysR substrate binding domain D7A46_09325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_09330 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_09330 PF00107 Zinc-binding dehydrogenase D7A46_09335 PF00962 Adenosine/AMP deaminase D7A46_09360 PF02445 Quinolinate synthetase A protein D7A46_09365 PF01960 ArgJ family D7A46_09370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D7A46_09370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D7A46_09375 PF00893 Small Multidrug Resistance protein D7A46_09385 PF05275 Copper resistance protein B precursor (CopB) D7A46_09390 PF07731 Multicopper oxidase D7A46_09390 PF00394 Multicopper oxidase D7A46_09390 PF07732 Multicopper oxidase D7A46_09405 PF00834 Ribulose-phosphate 3 epimerase family D7A46_09415 PF00756 Putative esterase D7A46_09425 PF04445 Putative SAM-dependent methyltransferase D7A46_09430 PF00814 Glycoprotease family D7A46_09435 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_09440 PF00293 NUDIX domain D7A46_09485 PF04715 Anthranilate synthase component I, N terminal region D7A46_09485 PF00425 chorismate binding enzyme D7A46_09490 PF00155 Aminotransferase class I and II D7A46_09495 PF00815 Histidinol dehydrogenase D7A46_09500 PF01634 ATP phosphoribosyltransferase D7A46_09505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D7A46_09510 PF01722 BolA-like protein D7A46_09515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D7A46_09520 PF04963 Sigma-54 factor, core binding domain D7A46_09520 PF00309 Sigma-54 factor, Activator interacting domain (AID) D7A46_09520 PF04552 Sigma-54, DNA binding domain D7A46_09565 PF00795 Carbon-nitrogen hydrolase D7A46_09575 PF01047 MarR family D7A46_09580 PF02566 OsmC-like protein D7A46_09585 PF00437 Type II/IV secretion system protein D7A46_09615 PF00476 DNA polymerase family A D7A46_09615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D7A46_09615 PF01612 3'-5' exonuclease D7A46_09615 PF01367 5'-3' exonuclease, C-terminal SAM fold D7A46_09620 PF02325 YGGT family D7A46_09625 PF14748 Pyrroline-5-carboxylate reductase dimerisation D7A46_09625 PF03807 NADP oxidoreductase coenzyme F420-dependent D7A46_09630 PF09179 TilS substrate binding domain D7A46_09630 PF11734 TilS substrate C-terminal domain D7A46_09630 PF01171 PP-loop family D7A46_09635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D7A46_09640 PF02541 Ppx/GppA phosphatase family D7A46_09645 PF00085 Thioredoxin D7A46_09650 PF07497 Rho termination factor, RNA-binding domain D7A46_09650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D7A46_09650 PF07498 Rho termination factor, N-terminal domain D7A46_09665 PF00216 Bacterial DNA-binding protein D7A46_09670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D7A46_09670 PF03147 Ferredoxin-fold anticodon binding domain D7A46_09670 PF03484 tRNA synthetase B5 domain D7A46_09670 PF03483 B3/4 domain D7A46_09670 PF01588 Putative tRNA binding domain D7A46_09675 PF01409 tRNA synthetases class II core domain (F) D7A46_09675 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D7A46_09695 PF00453 Ribosomal protein L20 D7A46_09700 PF01632 Ribosomal protein L35 D7A46_09705 PF07690 Major Facilitator Superfamily D7A46_09710 PF09335 SNARE associated Golgi protein D7A46_09715 PF02798 Glutathione S-transferase, N-terminal domain D7A46_09715 PF00043 Glutathione S-transferase, C-terminal domain D7A46_09725 PF00707 Translation initiation factor IF-3, C-terminal domain D7A46_09725 PF05198 Translation initiation factor IF-3, N-terminal domain D7A46_09730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D7A46_09730 PF03129 Anticodon binding domain D7A46_09730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D7A46_09730 PF02824 TGS domain D7A46_09735 PF13193 AMP-binding enzyme C-terminal domain D7A46_09735 PF00501 AMP-binding enzyme D7A46_09740 PF04751 Protein of unknown function (DUF615) D7A46_09745 PF00381 PTS HPr component phosphorylation site D7A46_09750 PF03668 P-loop ATPase protein family D7A46_09755 PF02569 Pantoate-beta-alanine ligase D7A46_09760 PF02548 Ketopantoate hydroxymethyltransferase D7A46_09765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D7A46_09770 PF01743 Poly A polymerase head domain D7A46_09770 PF12626 Polymerase A arginine-rich C-terminus D7A46_09770 PF12627 Probable RNA and SrmB- binding site of polymerase A D7A46_09780 PF03819 MazG nucleotide pyrophosphohydrolase domain D7A46_09790 PF02824 TGS domain D7A46_09790 PF04607 Region found in RelA / SpoT proteins D7A46_09790 PF13291 ACT domain D7A46_09795 PF05958 tRNA (Uracil-5-)-methyltransferase D7A46_09805 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_09810 PF01627 Hpt domain D7A46_09810 PF00672 HAMP domain D7A46_09810 PF00072 Response regulator receiver domain D7A46_09810 PF00512 His Kinase A (phospho-acceptor) domain D7A46_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_09810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D7A46_09815 PF00378 Enoyl-CoA hydratase/isomerase D7A46_09820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D7A46_09820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D7A46_09825 PF01261 Xylose isomerase-like TIM barrel D7A46_09835 PF00106 short chain dehydrogenase D7A46_09840 PF02233 NAD(P) transhydrogenase beta subunit D7A46_09845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D7A46_09850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D7A46_09850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D7A46_09855 PF00892 EamA-like transporter family D7A46_09865 PF07690 Major Facilitator Superfamily D7A46_09870 PF01207 Dihydrouridine synthase (Dus) D7A46_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_09880 PF03466 LysR substrate binding domain D7A46_09890 PF00899 ThiF family D7A46_09900 PF00330 Aconitase family (aconitate hydratase) D7A46_09900 PF00694 Aconitase C-terminal domain D7A46_09905 PF01026 TatD related DNase D7A46_09920 PF00009 Elongation factor Tu GTP binding domain D7A46_09920 PF16658 Class II release factor RF3, C-terminal domain D7A46_09920 PF03144 Elongation factor Tu domain 2 D7A46_09945 PF00990 Diguanylate cyclase, GGDEF domain D7A46_09945 PF00563 EAL domain D7A46_09945 PF03707 Bacterial signalling protein N terminal repeat D7A46_09950 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D7A46_09950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D7A46_09955 PF10369 Small subunit of acetolactate synthase D7A46_09960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D7A46_09960 PF00205 Thiamine pyrophosphate enzyme, central domain D7A46_09960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D7A46_09970 PF08264 Anticodon-binding domain of tRNA D7A46_09970 PF00133 tRNA synthetases class I (I, L, M and V) D7A46_09970 PF13603 Leucyl-tRNA synthetase, Domain 2 D7A46_09970 PF09334 tRNA synthetases class I (M) D7A46_09985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_09990 PF02687 FtsX-like permease family D7A46_09990 PF00005 ABC transporter D7A46_09990 PF12704 MacB-like periplasmic core domain D7A46_09995 PF02321 Outer membrane efflux protein D7A46_10010 PF00929 Exonuclease D7A46_10015 PF03193 RsgA GTPase D7A46_10025 PF00462 Glutaredoxin D7A46_10030 PF02556 Preprotein translocase subunit SecB D7A46_10045 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_10045 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_10060 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_10060 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_10070 PF04820 Tryptophan halogenase D7A46_10090 PF00221 Aromatic amino acid lyase D7A46_10105 PF13193 AMP-binding enzyme C-terminal domain D7A46_10105 PF00501 AMP-binding enzyme D7A46_10115 PF00550 Phosphopantetheine attachment site D7A46_10120 PF00550 Phosphopantetheine attachment site D7A46_10135 PF01926 50S ribosome-binding GTPase D7A46_10135 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D7A46_10140 PF13360 PQQ-like domain D7A46_10150 PF03129 Anticodon binding domain D7A46_10150 PF13393 Histidyl-tRNA synthetase D7A46_10155 PF04551 GcpE protein D7A46_10160 PF13464 Domain of unknown function (DUF4115) D7A46_10170 PF04055 Radical SAM superfamily D7A46_10175 PF00334 Nucleoside diphosphate kinase D7A46_10180 PF04384 Iron-sulphur cluster assembly D7A46_10185 PF01569 PAP2 superfamily D7A46_10190 PF00534 Glycosyl transferases group 1 D7A46_10190 PF13439 Glycosyltransferase Family 4 D7A46_10195 PF00595 PDZ domain D7A46_10195 PF03572 Peptidase family S41 D7A46_10195 PF17804 Tail specific protease N-terminal domain D7A46_10195 PF11818 C-terminal domain of tail specific protease (DUF3340) D7A46_10200 PF00933 Glycosyl hydrolase family 3 N terminal domain D7A46_10210 PF00561 alpha/beta hydrolase fold D7A46_10215 PF00171 Aldehyde dehydrogenase family D7A46_10220 PF00171 Aldehyde dehydrogenase family D7A46_10225 PF01202 Shikimate kinase D7A46_10230 PF02447 GntP family permease D7A46_10235 PF01081 KDPG and KHG aldolase D7A46_10240 PF00920 Dehydratase family D7A46_10250 PF00871 Acetokinase family D7A46_10255 PF01515 Phosphate acetyl/butaryl transferase D7A46_10255 PF07085 DRTGG domain D7A46_10260 PF05683 Fumarase C-terminus D7A46_10260 PF05681 Fumarate hydratase (Fumerase) D7A46_10275 PF07724 AAA domain (Cdc48 subfamily) D7A46_10275 PF10431 C-terminal, D2-small domain, of ClpB protein D7A46_10275 PF06689 ClpX C4-type zinc finger D7A46_10280 PF00574 Clp protease D7A46_10285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D7A46_10285 PF05698 Bacterial trigger factor protein (TF) C-terminus D7A46_10285 PF05697 Bacterial trigger factor protein (TF) D7A46_10290 PF00593 TonB dependent receptor D7A46_10290 PF07715 TonB-dependent Receptor Plug Domain D7A46_10295 PF13640 2OG-Fe(II) oxygenase superfamily D7A46_10295 PF18331 PKHD-type hydroxylase C-terminal domain D7A46_10300 PF08502 LeuA allosteric (dimerisation) domain D7A46_10300 PF00682 HMGL-like D7A46_10305 PF00561 alpha/beta hydrolase fold D7A46_10310 PF07021 Methionine biosynthesis protein MetW D7A46_10310 PF00561 alpha/beta hydrolase fold D7A46_10320 PF01725 Ham1 family D7A46_10330 PF02416 mttA/Hcf106 family D7A46_10335 PF02416 mttA/Hcf106 family D7A46_10340 PF00902 Sec-independent protein translocase protein (TatC) D7A46_10360 PF01790 Prolipoprotein diacylglyceryl transferase D7A46_10375 PF00303 Thymidylate synthase D7A46_10380 PF00186 Dihydrofolate reductase D7A46_10390 PF01625 Peptide methionine sulfoxide reductase D7A46_10400 PF01618 MotA/TolQ/ExbB proton channel family D7A46_10410 PF00551 Formyl transferase D7A46_10410 PF01842 ACT domain D7A46_10420 PF00171 Aldehyde dehydrogenase family D7A46_10425 PF00830 Ribosomal L28 family D7A46_10430 PF00471 Ribosomal protein L33 D7A46_10435 PF02254 TrkA-N domain D7A46_10435 PF00999 Sodium/hydrogen exchanger family D7A46_10455 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) D7A46_10460 PF00580 UvrD/REP helicase N-terminal domain D7A46_10460 PF13361 UvrD-like helicase C-terminal domain D7A46_10475 PF01751 Toprim domain D7A46_10475 PF01131 DNA topoisomerase D7A46_10475 PF08272 Topoisomerase I zinc-ribbon-like D7A46_10475 PF01396 Topoisomerase DNA binding C4 zinc finger D7A46_10485 PF01638 HxlR-like helix-turn-helix D7A46_10490 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_10490 PF00107 Zinc-binding dehydrogenase D7A46_10505 PF01810 LysE type translocator D7A46_10510 PF03279 Bacterial lipid A biosynthesis acyltransferase D7A46_10520 PF00375 Sodium:dicarboxylate symporter family D7A46_10530 PF01118 Semialdehyde dehydrogenase, NAD binding domain D7A46_10530 PF02774 Semialdehyde dehydrogenase, dimerisation domain D7A46_10550 PF01416 tRNA pseudouridine synthase D7A46_10560 PF01176 Translation initiation factor 1A / IF-1 D7A46_10575 PF00180 Isocitrate/isopropylmalate dehydrogenase D7A46_10585 PF00694 Aconitase C-terminal domain D7A46_10590 PF00330 Aconitase family (aconitate hydratase) D7A46_10600 PF03466 LysR substrate binding domain D7A46_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_10620 PF00293 NUDIX domain D7A46_10625 PF01590 GAF domain D7A46_10625 PF05524 PEP-utilising enzyme, N-terminal D7A46_10625 PF00391 PEP-utilising enzyme, mobile domain D7A46_10625 PF02896 PEP-utilising enzyme, TIM barrel domain D7A46_10630 PF00141 Peroxidase D7A46_10635 PF12706 Beta-lactamase superfamily domain D7A46_10640 PF03466 LysR substrate binding domain D7A46_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_10650 PF02798 Glutathione S-transferase, N-terminal domain D7A46_10655 PF08279 HTH domain D7A46_10655 PF13280 WYL domain D7A46_10660 PF13419 Haloacid dehalogenase-like hydrolase D7A46_10665 PF01479 S4 domain D7A46_10665 PF00849 RNA pseudouridylate synthase D7A46_10675 PF12111 Polyribonucleotide phosphorylase C terminal D7A46_10675 PF10150 Ribonuclease E/G family D7A46_10675 PF00575 S1 RNA binding domain D7A46_10680 PF00501 AMP-binding enzyme D7A46_10680 PF13193 AMP-binding enzyme C-terminal domain D7A46_10695 PF03466 LysR substrate binding domain D7A46_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_10700 PF00106 short chain dehydrogenase D7A46_10705 PF04055 Radical SAM superfamily D7A46_10705 PF06969 HemN C-terminal domain D7A46_10715 PF01554 MatE D7A46_10720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_10720 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_10720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D7A46_10725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_10725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D7A46_10730 PF03109 ABC1 family D7A46_10735 PF01197 Ribosomal protein L31 D7A46_10750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D7A46_10770 PF03884 DNA gyrase inhibitor YacG D7A46_10775 PF00753 Metallo-beta-lactamase superfamily D7A46_10780 PF00762 Ferrochelatase D7A46_10790 PF01177 Asp/Glu/Hydantoin racemase D7A46_10805 PF01206 Sulfurtransferase TusA D7A46_10810 PF00571 CBS domain D7A46_10810 PF03471 Transporter associated domain D7A46_10815 PF00795 Carbon-nitrogen hydrolase D7A46_10820 PF01588 Putative tRNA binding domain D7A46_10830 PF08334 Type II secretion system (T2SS), protein G D7A46_10830 PF07963 Prokaryotic N-terminal methylation motif D7A46_10835 PF00482 Type II secretion system (T2SS), protein F D7A46_10840 PF00271 Helicase conserved C-terminal domain D7A46_10840 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D7A46_10840 PF00270 DEAD/DEAH box helicase D7A46_10840 PF18074 Primosomal protein N C-terminal domain D7A46_10840 PF17764 3′ DNA-binding domain (3′BD) D7A46_10845 PF02254 TrkA-N domain D7A46_10845 PF00999 Sodium/hydrogen exchanger family D7A46_10850 PF01430 Hsp33 protein D7A46_10860 PF00226 DnaJ domain D7A46_10860 PF01556 DnaJ C terminal domain D7A46_10870 PF01544 CorA-like Mg2+ transporter protein D7A46_10875 PF00013 KH domain D7A46_10875 PF01138 3' exoribonuclease family, domain 1 D7A46_10875 PF03725 3' exoribonuclease family, domain 2 D7A46_10875 PF00575 S1 RNA binding domain D7A46_10875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D7A46_10880 PF00312 Ribosomal protein S15 D7A46_10890 PF13538 UvrD-like helicase C-terminal domain D7A46_10895 PF13361 UvrD-like helicase C-terminal domain D7A46_10895 PF12705 PD-(D/E)XK nuclease superfamily D7A46_10895 PF00580 UvrD/REP helicase N-terminal domain D7A46_10900 PF17946 RecC C-terminal domain D7A46_10910 PF03976 Polyphosphate kinase 2 (PPK2) D7A46_10920 PF01209 ubiE/COQ5 methyltransferase family D7A46_10930 PF03109 ABC1 family D7A46_10935 PF01494 FAD binding domain D7A46_10940 PF01502 Phosphoribosyl-AMP cyclohydrolase D7A46_10955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D7A46_10955 PF00361 Proton-conducting membrane transporter D7A46_10955 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D7A46_10955 PF13244 Domain of unknown function (DUF4040) D7A46_10960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D7A46_10965 PF00361 Proton-conducting membrane transporter D7A46_10975 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D7A46_10985 PF02033 Ribosome-binding factor A D7A46_10990 PF08364 Bacterial translation initiation factor IF-2 associated region D7A46_10990 PF11987 Translation-initiation factor 2 D7A46_10990 PF04760 Translation initiation factor IF-2, N-terminal region D7A46_10990 PF00009 Elongation factor Tu GTP binding domain D7A46_10995 PF00575 S1 RNA binding domain D7A46_10995 PF13184 NusA-like KH domain D7A46_10995 PF08529 NusA N-terminal domain D7A46_11000 PF17384 RimP C-terminal SH3 domain D7A46_11000 PF02576 RimP N-terminal domain D7A46_11020 PF03840 Preprotein translocase SecG subunit D7A46_11025 PF00121 Triosephosphate isomerase D7A46_11030 PF00437 Type II/IV secretion system protein D7A46_11030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D7A46_11035 PF00482 Type II secretion system (T2SS), protein F D7A46_11040 PF06750 Bacterial Peptidase A24 N-terminal domain D7A46_11040 PF01478 Type IV leader peptidase family D7A46_11045 PF01121 Dephospho-CoA kinase D7A46_11055 PF08032 RNA 2'-O ribose methyltransferase substrate binding D7A46_11055 PF00588 SpoU rRNA Methylase family D7A46_11060 PF06865 Pyrimidine/purine nucleoside phosphorylase D7A46_11070 PF02463 RecF/RecN/SMC N terminal domain D7A46_11075 PF02622 Uncharacterized ACR, COG1678 D7A46_11080 PF03652 Holliday junction resolvase D7A46_11085 PF13533 Biotin-lipoyl like D7A46_11110 PF02805 Metal binding domain of Ada D7A46_11110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D7A46_11110 PF12833 Helix-turn-helix domain D7A46_11110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D7A46_11115 PF01066 CDP-alcohol phosphatidyltransferase D7A46_11125 PF02151 UvrB/uvrC motif D7A46_11125 PF08459 UvrC Helix-hairpin-helix N-terminal D7A46_11125 PF01541 GIY-YIG catalytic domain D7A46_11150 PF00378 Enoyl-CoA hydratase/isomerase D7A46_11150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D7A46_11150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D7A46_11155 PF00108 Thiolase, N-terminal domain D7A46_11155 PF02803 Thiolase, C-terminal domain D7A46_11175 PF09278 MerR, DNA binding D7A46_11175 PF00376 MerR family regulatory protein D7A46_11185 PF01323 DSBA-like thioredoxin domain D7A46_11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_11200 PF00183 Hsp90 protein D7A46_11215 PF13726 Na+-H+ antiporter family D7A46_11215 PF03553 Na+/H+ antiporter family D7A46_11220 PF00561 alpha/beta hydrolase fold D7A46_11240 PF00623 RNA polymerase Rpb1, domain 2 D7A46_11240 PF04997 RNA polymerase Rpb1, domain 1 D7A46_11240 PF04983 RNA polymerase Rpb1, domain 3 D7A46_11240 PF05000 RNA polymerase Rpb1, domain 4 D7A46_11240 PF04998 RNA polymerase Rpb1, domain 5 D7A46_11245 PF00562 RNA polymerase Rpb2, domain 6 D7A46_11245 PF04563 RNA polymerase beta subunit D7A46_11245 PF04561 RNA polymerase Rpb2, domain 2 D7A46_11245 PF04560 RNA polymerase Rpb2, domain 7 D7A46_11245 PF04565 RNA polymerase Rpb2, domain 3 D7A46_11245 PF10385 RNA polymerase beta subunit external 1 domain D7A46_11250 PF16320 Ribosomal protein L7/L12 dimerisation domain D7A46_11250 PF00542 Ribosomal protein L7/L12 C-terminal domain D7A46_11255 PF00466 Ribosomal protein L10 D7A46_11260 PF00687 Ribosomal protein L1p/L10e family D7A46_11265 PF03946 Ribosomal protein L11, N-terminal domain D7A46_11265 PF00298 Ribosomal protein L11, RNA binding domain D7A46_11270 PF02357 Transcription termination factor nusG D7A46_11270 PF00467 KOW motif D7A46_11275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D7A46_11285 PF00009 Elongation factor Tu GTP binding domain D7A46_11285 PF03143 Elongation factor Tu C-terminal domain D7A46_11285 PF03144 Elongation factor Tu domain 2 D7A46_11310 PF04715 Anthranilate synthase component I, N terminal region D7A46_11310 PF00425 chorismate binding enzyme D7A46_11315 PF13419 Haloacid dehalogenase-like hydrolase D7A46_11320 PF00498 FHA domain D7A46_11320 PF12401 Protein of unknown function (DUF2662) D7A46_11325 PF00263 Bacterial type II and III secretion system protein D7A46_11325 PF03958 Bacterial type II/III secretion system short domain D7A46_11340 PF00816 H-NS histone family D7A46_11365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D7A46_11365 PF03900 Porphobilinogen deaminase, C-terminal domain D7A46_11370 PF00072 Response regulator receiver domain D7A46_11370 PF04397 LytTr DNA-binding domain D7A46_11375 PF06580 Histidine kinase D7A46_11375 PF07694 5TMR of 5TMR-LYT D7A46_11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_11380 PF00206 Lyase D7A46_11380 PF14698 Argininosuccinate lyase C-terminal D7A46_11385 PF04362 Bacterial Fe(2+) trafficking D7A46_11390 PF01895 PhoU domain D7A46_11395 PF02321 Outer membrane efflux protein D7A46_11400 PF00892 EamA-like transporter family D7A46_11415 PF01964 Radical SAM ThiC family D7A46_11415 PF13667 ThiC-associated domain D7A46_11420 PF00293 NUDIX domain D7A46_11425 PF00149 Calcineurin-like phosphoesterase D7A46_11430 PF01258 Prokaryotic dksA/traR C4-type zinc finger D7A46_11435 PF00749 tRNA synthetases class I (E and Q), catalytic domain D7A46_11440 PF01098 Cell cycle protein D7A46_11445 PF02875 Mur ligase family, glutamate ligase domain D7A46_11445 PF08245 Mur ligase middle domain D7A46_11455 PF02421 Ferrous iron transport protein B D7A46_11455 PF07670 Nucleoside recognition D7A46_11455 PF07664 Ferrous iron transport protein B C terminus D7A46_11465 PF00589 Phage integrase family D7A46_11465 PF02899 Phage integrase, N-terminal SAM-like domain D7A46_11470 PF13098 Thioredoxin-like domain D7A46_11470 PF10411 Disulfide bond isomerase protein N-terminus D7A46_11475 PF03447 Homoserine dehydrogenase, NAD binding domain D7A46_11475 PF00742 Homoserine dehydrogenase D7A46_11475 PF01842 ACT domain D7A46_11480 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_11485 PF00768 D-alanyl-D-alanine carboxypeptidase D7A46_11495 PF00512 His Kinase A (phospho-acceptor) domain D7A46_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_11500 PF00072 Response regulator receiver domain D7A46_11500 PF02954 Bacterial regulatory protein, Fis family D7A46_11500 PF00158 Sigma-54 interaction domain D7A46_11505 PF03572 Peptidase family S41 D7A46_11505 PF00595 PDZ domain D7A46_11510 PF01676 Metalloenzyme superfamily D7A46_11510 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D7A46_11515 PF03739 Lipopolysaccharide export system permease LptF/LptG D7A46_11525 PF02789 Cytosol aminopeptidase family, N-terminal domain D7A46_11525 PF00883 Cytosol aminopeptidase family, catalytic domain D7A46_11545 PF00677 Lumazine binding domain D7A46_11555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D7A46_11555 PF01872 RibD C-terminal domain D7A46_11560 PF03477 ATP cone domain D7A46_11565 PF00909 Ammonium Transporter Family D7A46_11570 PF00543 Nitrogen regulatory protein P-II D7A46_11580 PF13335 Magnesium chelatase, subunit ChlI C-terminal D7A46_11580 PF01078 Magnesium chelatase, subunit ChlI D7A46_11590 PF01636 Phosphotransferase enzyme family D7A46_11595 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase D7A46_11620 PF02909 Tetracyclin repressor-like, C-terminal domain D7A46_11620 PF00440 Bacterial regulatory proteins, tetR family D7A46_11625 PF07690 Major Facilitator Superfamily D7A46_11640 PF00905 Penicillin binding protein transpeptidase domain D7A46_11665 PF00916 Sulfate permease family D7A46_11665 PF01740 STAS domain D7A46_11670 PF00582 Universal stress protein family D7A46_11700 PF00665 Integrase core domain D7A46_11715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D7A46_11715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D7A46_11715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D7A46_11715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D7A46_11720 PF00809 Pterin binding enzyme D7A46_11740 PF00665 Integrase core domain D7A46_11765 PF00589 Phage integrase family D7A46_11765 PF02899 Phage integrase, N-terminal SAM-like domain D7A46_11800 PF00905 Penicillin binding protein transpeptidase domain D7A46_11825 PF01740 STAS domain D7A46_11825 PF00916 Sulfate permease family D7A46_11830 PF00582 Universal stress protein family D7A46_11850 PF00665 Integrase core domain D7A46_11860 PF13335 Magnesium chelatase, subunit ChlI C-terminal D7A46_11860 PF01078 Magnesium chelatase, subunit ChlI D7A46_11875 PF00701 Dihydrodipicolinate synthetase family D7A46_11885 PF03573 outer membrane porin, OprD family D7A46_11890 PF00719 Inorganic pyrophosphatase D7A46_11905 PF13193 AMP-binding enzyme C-terminal domain D7A46_11905 PF00501 AMP-binding enzyme D7A46_11910 PF00521 DNA gyrase/topoisomerase IV, subunit A D7A46_11910 PF03989 DNA gyrase C-terminal domain, beta-propeller D7A46_11915 PF07690 Major Facilitator Superfamily D7A46_11920 PF03458 UPF0126 domain D7A46_11925 PF02810 SEC-C motif D7A46_11930 PF03471 Transporter associated domain D7A46_11930 PF03741 Integral membrane protein TerC family D7A46_11935 PF03641 Possible lysine decarboxylase D7A46_11940 PF07690 Major Facilitator Superfamily D7A46_11950 PF00817 impB/mucB/samB family D7A46_11950 PF11798 IMS family HHH motif D7A46_11950 PF11799 impB/mucB/samB family C-terminal domain D7A46_11965 PF11842 Domain of unknown function (DUF3362) D7A46_11965 PF08497 Radical SAM N-terminal D7A46_11965 PF04055 Radical SAM superfamily D7A46_11985 PF03358 NADPH-dependent FMN reductase D7A46_11995 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_12030 PF00440 Bacterial regulatory proteins, tetR family D7A46_12055 PF01327 Polypeptide deformylase D7A46_12065 PF17782 DprA winged helix domain D7A46_12065 PF02481 DNA recombination-mediator protein A D7A46_12070 PF01300 Telomere recombination D7A46_12075 PF00892 EamA-like transporter family D7A46_12080 PF00440 Bacterial regulatory proteins, tetR family D7A46_12085 PF07690 Major Facilitator Superfamily D7A46_12095 PF00255 Glutathione peroxidase D7A46_12105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D7A46_12110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D7A46_12110 PF02874 ATP synthase alpha/beta family, beta-barrel domain D7A46_12115 PF00231 ATP synthase D7A46_12120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D7A46_12120 PF00306 ATP synthase alpha/beta chain, C terminal domain D7A46_12120 PF02874 ATP synthase alpha/beta family, beta-barrel domain D7A46_12125 PF00213 ATP synthase delta (OSCP) subunit D7A46_12130 PF00430 ATP synthase B/B' CF(0) D7A46_12135 PF00137 ATP synthase subunit C D7A46_12140 PF00119 ATP synthase A chain D7A46_12160 PF00005 ABC transporter D7A46_12165 PF00950 ABC 3 transport family D7A46_12170 PF01810 LysE type translocator D7A46_12175 PF04261 Dyp-type peroxidase family D7A46_12185 PF03949 Malic enzyme, NAD binding domain D7A46_12185 PF00390 Malic enzyme, N-terminal domain D7A46_12190 PF03485 Arginyl tRNA synthetase N terminal domain D7A46_12190 PF05746 DALR anticodon binding domain D7A46_12190 PF00750 tRNA synthetases class I (R) D7A46_12210 PF05726 Pirin C-terminal cupin domain D7A46_12210 PF02678 Pirin D7A46_12220 PF03551 Transcriptional regulator PadR-like family D7A46_12225 PF13427 Domain of unknown function (DUF4111) D7A46_12225 PF01909 Nucleotidyltransferase domain D7A46_12230 PF00117 Glutamine amidotransferase class-I D7A46_12230 PF02540 NAD synthase D7A46_12230 PF00958 GMP synthase C terminal domain D7A46_12235 PF04286 Protein of unknown function (DUF445) D7A46_12240 PF07681 DoxX D7A46_12245 PF09335 SNARE associated Golgi protein D7A46_12260 PF13614 AAA domain D7A46_12270 PF01722 BolA-like protein D7A46_12285 PF01648 4'-phosphopantetheinyl transferase superfamily D7A46_12290 PF12697 Alpha/beta hydrolase family D7A46_12310 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_12310 PF14765 Polyketide synthase dehydratase D7A46_12310 PF00550 Phosphopantetheine attachment site D7A46_12310 PF00975 Thioesterase domain D7A46_12310 PF16197 Ketoacyl-synthetase C-terminal extension D7A46_12310 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_12310 PF08242 Methyltransferase domain D7A46_12315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_12315 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_12315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_12320 PF00501 AMP-binding enzyme D7A46_12325 PF03472 Autoinducer binding domain D7A46_12325 PF00196 Bacterial regulatory proteins, luxR family D7A46_12335 PF00765 Autoinducer synthase D7A46_12340 PF07690 Major Facilitator Superfamily D7A46_12340 PF00083 Sugar (and other) transporter D7A46_12345 PF00378 Enoyl-CoA hydratase/isomerase D7A46_12350 PF00378 Enoyl-CoA hydratase/isomerase D7A46_12355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_12355 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_12355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_12360 PF13193 AMP-binding enzyme C-terminal domain D7A46_12360 PF00501 AMP-binding enzyme D7A46_12365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D7A46_12365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D7A46_12370 PF00171 Aldehyde dehydrogenase family D7A46_12380 PF00324 Amino acid permease D7A46_12385 PF00324 Amino acid permease D7A46_12390 PF01042 Endoribonuclease L-PSP D7A46_12395 PF01168 Alanine racemase, N-terminal domain D7A46_12395 PF00842 Alanine racemase, C-terminal domain D7A46_12400 PF01266 FAD dependent oxidoreductase D7A46_12405 PF01037 Lrp/AsnC ligand binding domain D7A46_12415 PF00593 TonB dependent receptor D7A46_12415 PF07715 TonB-dependent Receptor Plug Domain D7A46_12430 PF00849 RNA pseudouridylate synthase D7A46_12445 PF08361 MAATS-type transcriptional repressor, C-terminal region D7A46_12445 PF00440 Bacterial regulatory proteins, tetR family D7A46_12455 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_12455 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_12495 PF00330 Aconitase family (aconitate hydratase) D7A46_12495 PF00694 Aconitase C-terminal domain D7A46_12500 PF00285 Citrate synthase, C-terminal domain D7A46_12510 PF07729 FCD domain D7A46_12510 PF00392 Bacterial regulatory proteins, gntR family D7A46_12520 PF00155 Aminotransferase class I and II D7A46_12525 PF09330 D-lactate dehydrogenase, membrane binding D7A46_12525 PF01565 FAD binding domain D7A46_12530 PF01070 FMN-dependent dehydrogenase D7A46_12535 PF07729 FCD domain D7A46_12535 PF00392 Bacterial regulatory proteins, gntR family D7A46_12540 PF02652 L-lactate permease D7A46_12545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D7A46_12545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D7A46_12545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D7A46_12545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D7A46_12550 PF16363 GDP-mannose 4,6 dehydratase D7A46_12555 PF00342 Phosphoglucose isomerase D7A46_12560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D7A46_12560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D7A46_12560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D7A46_12565 PF00483 Nucleotidyl transferase D7A46_12570 PF02397 Bacterial sugar transferase D7A46_12575 PF00535 Glycosyl transferase family 2 D7A46_12580 PF00534 Glycosyl transferases group 1 D7A46_12595 PF13439 Glycosyltransferase Family 4 D7A46_12595 PF00534 Glycosyl transferases group 1 D7A46_12600 PF14602 Hexapeptide repeat of succinyl-transferase D7A46_12600 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_12600 PF12464 Maltose acetyltransferase D7A46_12610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D7A46_12615 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_12620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D7A46_12620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D7A46_12625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D7A46_12625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D7A46_12625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D7A46_12630 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D7A46_12630 PF10531 SLBB domain D7A46_12630 PF02563 Polysaccharide biosynthesis/export protein D7A46_12635 PF01451 Low molecular weight phosphotyrosine protein phosphatase D7A46_12640 PF02706 Chain length determinant protein D7A46_12640 PF13614 AAA domain D7A46_12640 PF13807 G-rich domain on putative tyrosine kinase D7A46_12660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D7A46_12660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D7A46_12665 PF03023 Lipid II flippase MurJ D7A46_12670 PF01510 N-acetylmuramoyl-L-alanine amidase D7A46_12675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D7A46_12675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D7A46_12685 PF05506 Domain of unknown function (DUF756) D7A46_12685 PF04185 Phosphoesterase family D7A46_12690 PF03725 3' exoribonuclease family, domain 2 D7A46_12690 PF01138 3' exoribonuclease family, domain 1 D7A46_12695 PF00487 Fatty acid desaturase D7A46_12700 PF00175 Oxidoreductase NAD-binding domain D7A46_12705 PF00440 Bacterial regulatory proteins, tetR family D7A46_12710 PF08360 QacR-like protein, C-terminal region D7A46_12710 PF00440 Bacterial regulatory proteins, tetR family D7A46_12715 PF01323 DSBA-like thioredoxin domain D7A46_12725 PF13419 Haloacid dehalogenase-like hydrolase D7A46_12730 PF00106 short chain dehydrogenase D7A46_12745 PF00583 Acetyltransferase (GNAT) family D7A46_12745 PF00696 Amino acid kinase family D7A46_12750 PF09084 NMT1/THI5 like D7A46_12755 PF09084 NMT1/THI5 like D7A46_12760 PF00296 Luciferase-like monooxygenase D7A46_12765 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_12770 PF00005 ABC transporter D7A46_12775 PF00440 Bacterial regulatory proteins, tetR family D7A46_12775 PF08362 YcdC-like protein, C-terminal region D7A46_12780 PF01048 Phosphorylase superfamily D7A46_12805 PF00905 Penicillin binding protein transpeptidase domain D7A46_12820 PF01687 Riboflavin kinase D7A46_12820 PF06574 FAD synthetase D7A46_12825 PF00133 tRNA synthetases class I (I, L, M and V) D7A46_12825 PF08264 Anticodon-binding domain of tRNA D7A46_12825 PF06827 Zinc finger found in FPG and IleRS D7A46_12830 PF01252 Signal peptidase (SPase) II D7A46_12835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D7A46_12875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D7A46_12880 PF07859 alpha/beta hydrolase fold D7A46_12905 PF01025 GrpE D7A46_12910 PF00012 Hsp70 protein D7A46_12930 PF13406 Transglycosylase SLT domain D7A46_12935 PF02222 ATP-grasp domain D7A46_12935 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D7A46_12940 PF00731 AIR carboxylase D7A46_12955 PF02875 Mur ligase family, glutamate ligase domain D7A46_12955 PF08245 Mur ligase middle domain D7A46_12955 PF01225 Mur ligase family, catalytic domain D7A46_12965 PF01569 PAP2 superfamily D7A46_12970 PF03741 Integral membrane protein TerC family D7A46_12980 PF03738 Glutathionylspermidine synthase preATP-grasp D7A46_12985 PF00355 Rieske [2Fe-2S] domain D7A46_12990 PF01979 Amidohydrolase family D7A46_12995 PF00156 Phosphoribosyl transferase domain D7A46_13005 PF10411 Disulfide bond isomerase protein N-terminus D7A46_13005 PF13098 Thioredoxin-like domain D7A46_13010 PF01545 Cation efflux family D7A46_13010 PF16916 Dimerisation domain of Zinc Transporter D7A46_13015 PF02583 Metal-sensitive transcriptional repressor D7A46_13020 PF12631 MnmE helical domain D7A46_13020 PF10396 GTP-binding protein TrmE N-terminus D7A46_13020 PF01926 50S ribosome-binding GTPase D7A46_13025 PF14849 YidC periplasmic domain D7A46_13025 PF02096 60Kd inner membrane protein D7A46_13030 PF01809 Putative membrane protein insertion efficiency factor D7A46_13035 PF00825 Ribonuclease P D7A46_13040 PF00468 Ribosomal protein L34 D7A46_13045 PF11638 DnaA N-terminal domain D7A46_13045 PF00308 Bacterial dnaA protein D7A46_13045 PF08299 Bacterial dnaA protein helix-turn-helix D7A46_13050 PF00712 DNA polymerase III beta subunit, N-terminal domain D7A46_13050 PF02767 DNA polymerase III beta subunit, central domain D7A46_13050 PF02768 DNA polymerase III beta subunit, C-terminal domain D7A46_13055 PF02463 RecF/RecN/SMC N terminal domain D7A46_13060 PF00986 DNA gyrase B subunit, carboxyl terminus D7A46_13060 PF18053 DNA gyrase B subunit insert domain D7A46_13060 PF00204 DNA gyrase B D7A46_13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_13060 PF01751 Toprim domain D7A46_13070 PF09335 SNARE associated Golgi protein D7A46_13075 PF12848 ABC transporter D7A46_13075 PF00005 ABC transporter D7A46_13095 PF01521 Iron-sulphur cluster biosynthesis D7A46_13100 PF00561 alpha/beta hydrolase fold D7A46_13105 PF03702 Anhydro-N-acetylmuramic acid kinase D7A46_13110 PF00579 tRNA synthetases class I (W and Y) D7A46_13155 PF00209 Sodium:neurotransmitter symporter family D7A46_13165 PF01029 NusB family D7A46_13165 PF01189 16S rRNA methyltransferase RsmB/F D7A46_13170 PF00551 Formyl transferase D7A46_13170 PF02911 Formyl transferase, C-terminal domain D7A46_13175 PF00920 Dehydratase family D7A46_13190 PF03466 LysR substrate binding domain D7A46_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_13195 PF00860 Permease family D7A46_13200 PF00311 Phosphoenolpyruvate carboxylase D7A46_13205 PF00440 Bacterial regulatory proteins, tetR family D7A46_13205 PF08361 MAATS-type transcriptional repressor, C-terminal region D7A46_13210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_13215 PF00873 AcrB/AcrD/AcrF family D7A46_13225 PF00226 DnaJ domain D7A46_13225 PF01556 DnaJ C terminal domain D7A46_13225 PF00684 DnaJ central domain D7A46_13235 PF01113 Dihydrodipicolinate reductase, N-terminus D7A46_13235 PF05173 Dihydrodipicolinate reductase, C-terminus D7A46_13245 PF07690 Major Facilitator Superfamily D7A46_13250 PF00248 Aldo/keto reductase family D7A46_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_13255 PF03466 LysR substrate binding domain D7A46_13270 PF00155 Aminotransferase class I and II D7A46_13270 PF00392 Bacterial regulatory proteins, gntR family D7A46_13275 PF00107 Zinc-binding dehydrogenase D7A46_13275 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_13280 PF03352 Methyladenine glycosylase D7A46_13295 PF10576 Iron-sulfur binding domain of endonuclease III D7A46_13295 PF14815 NUDIX domain D7A46_13295 PF00730 HhH-GPD superfamily base excision DNA repair protein D7A46_13295 PF00633 Helix-hairpin-helix motif D7A46_13310 PF07043 Protein of unknown function (DUF1328) D7A46_13315 PF03692 Putative zinc- or iron-chelating domain D7A46_13320 PF07995 Glucose / Sorbosone dehydrogenase D7A46_13325 PF12002 MgsA AAA+ ATPase C terminal D7A46_13325 PF16193 AAA C-terminal domain D7A46_13325 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_13330 PF01226 Formate/nitrite transporter D7A46_13340 PF01259 SAICAR synthetase D7A46_13350 PF00701 Dihydrodipicolinate synthetase family D7A46_13355 PF00857 Isochorismatase family D7A46_13360 PF01758 Sodium Bile acid symporter family D7A46_13365 PF01554 MatE D7A46_13370 PF04463 Protein of unknown function (DUF523) D7A46_13375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D7A46_13385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D7A46_13390 PF02798 Glutathione S-transferase, N-terminal domain D7A46_13390 PF14497 Glutathione S-transferase, C-terminal domain D7A46_13400 PF00324 Amino acid permease D7A46_13410 PF02492 CobW/HypB/UreG, nucleotide-binding domain D7A46_13410 PF07683 Cobalamin synthesis protein cobW C-terminal domain D7A46_13420 PF07702 UTRA domain D7A46_13420 PF00392 Bacterial regulatory proteins, gntR family D7A46_13425 PF05962 HutD D7A46_13430 PF01175 Urocanase Rossmann-like domain D7A46_13430 PF17392 Urocanase C-terminal domain D7A46_13430 PF17391 Urocanase N-terminal domain D7A46_13435 PF00221 Aromatic amino acid lyase D7A46_13440 PF00324 Amino acid permease D7A46_13445 PF01979 Amidohydrolase family D7A46_13450 PF00491 Arginase family D7A46_13465 PF01177 Asp/Glu/Hydantoin racemase D7A46_13470 PF01380 SIS domain D7A46_13475 PF14602 Hexapeptide repeat of succinyl-transferase D7A46_13475 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_13475 PF12804 MobA-like NTP transferase domain D7A46_13480 PF04608 Phosphatidylglycerophosphatase A D7A46_13485 PF02769 AIR synthase related protein, C-terminal domain D7A46_13485 PF00586 AIR synthase related protein, N-terminal domain D7A46_13490 PF01029 NusB family D7A46_13495 PF00885 6,7-dimethyl-8-ribityllumazine synthase D7A46_13500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D7A46_13500 PF00925 GTP cyclohydrolase II D7A46_13530 PF02580 D-Tyr-tRNA(Tyr) deacylase D7A46_13535 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D7A46_13535 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D7A46_13540 PF00581 Rhodanese-like domain D7A46_13545 PF02666 Phosphatidylserine decarboxylase D7A46_13550 PF03069 Acetamidase/Formamidase family D7A46_13570 PF11808 Phosphate regulon sensor protein PhoR D7A46_13570 PF00989 PAS fold D7A46_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_13570 PF00512 His Kinase A (phospho-acceptor) domain D7A46_13575 PF00486 Transcriptional regulatory protein, C terminal D7A46_13575 PF00072 Response regulator receiver domain D7A46_13585 PF00106 short chain dehydrogenase D7A46_13590 PF01554 MatE D7A46_13595 PF00155 Aminotransferase class I and II D7A46_13600 PF04286 Protein of unknown function (DUF445) D7A46_13615 PF04262 Glutamate-cysteine ligase D7A46_13620 PF02600 Disulfide bond formation protein DsbB D7A46_13625 PF04717 Type VI secretion system, phage-baseplate injector D7A46_13630 PF01476 LysM domain D7A46_13630 PF00877 NlpC/P60 family D7A46_13645 PF05728 Uncharacterised protein family (UPF0227) D7A46_13650 PF01751 Toprim domain D7A46_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_13650 PF00204 DNA gyrase B D7A46_13650 PF00986 DNA gyrase B subunit, carboxyl terminus D7A46_13655 PF00106 short chain dehydrogenase D7A46_13660 PF04115 Ureidoglycolate lyase D7A46_13665 PF03561 Allantoicase repeat D7A46_13670 PF01494 FAD binding domain D7A46_13680 PF00860 Permease family D7A46_13685 PF00576 HIUase/Transthyretin family D7A46_13715 PF11412 Disulphide bond corrector protein DsbC D7A46_13715 PF02683 Cytochrome C biogenesis protein transmembrane region D7A46_13720 PF07694 5TMR of 5TMR-LYT D7A46_13720 PF00990 Diguanylate cyclase, GGDEF domain D7A46_13725 PF07859 alpha/beta hydrolase fold D7A46_13735 PF03960 ArsC family D7A46_13740 PF03372 Endonuclease/Exonuclease/phosphatase family D7A46_13745 PF00156 Phosphoribosyl transferase domain D7A46_13750 PF00593 TonB dependent receptor D7A46_13750 PF07715 TonB-dependent Receptor Plug Domain D7A46_13760 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D7A46_13760 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D7A46_13770 PF08245 Mur ligase middle domain D7A46_13770 PF01225 Mur ligase family, catalytic domain D7A46_13770 PF02875 Mur ligase family, glutamate ligase domain D7A46_13775 PF01820 D-ala D-ala ligase N-terminus D7A46_13775 PF07478 D-ala D-ala ligase C-terminus D7A46_13780 PF03799 Cell division protein FtsQ D7A46_13780 PF08478 POTRA domain, FtsQ-type D7A46_13785 PF02491 SHS2 domain inserted in FTSA D7A46_13790 PF00091 Tubulin/FtsZ family, GTPase domain D7A46_13790 PF12327 FtsZ family, C-terminal domain D7A46_13795 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D7A46_13805 PF01551 Peptidase family M23 D7A46_13810 PF00456 Transketolase, thiamine diphosphate binding domain D7A46_13810 PF17831 Pyruvate dehydrogenase E1 component middle domain D7A46_13815 PF00364 Biotin-requiring enzyme D7A46_13815 PF02817 e3 binding domain D7A46_13815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D7A46_13825 PF01169 Uncharacterized protein family UPF0016 D7A46_13830 PF07715 TonB-dependent Receptor Plug Domain D7A46_13830 PF00593 TonB dependent receptor D7A46_13835 PF01613 Flavin reductase like domain D7A46_13835 PF00258 Flavodoxin D7A46_13840 PF03692 Putative zinc- or iron-chelating domain D7A46_13845 PF00571 CBS domain D7A46_13845 PF00478 IMP dehydrogenase / GMP reductase domain D7A46_13850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D7A46_13850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D7A46_13850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D7A46_13850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D7A46_13855 PF01243 Pyridoxamine 5'-phosphate oxidase D7A46_13855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D7A46_13860 PF01368 DHH family D7A46_13860 PF17768 RecJ OB domain D7A46_13860 PF02272 DHHA1 domain D7A46_13880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_13885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D7A46_13890 PF04452 RNA methyltransferase D7A46_13895 PF00924 Mechanosensitive ion channel D7A46_13905 PF16177 Acetyl-coenzyme A synthetase N-terminus D7A46_13905 PF00501 AMP-binding enzyme D7A46_13905 PF13193 AMP-binding enzyme C-terminal domain D7A46_13910 PF00857 Isochorismatase family D7A46_13915 PF01037 Lrp/AsnC ligand binding domain D7A46_13920 PF00872 Transposase, Mutator family D7A46_13925 PF00296 Luciferase-like monooxygenase D7A46_13930 PF03358 NADPH-dependent FMN reductase D7A46_13935 PF00196 Bacterial regulatory proteins, luxR family D7A46_13935 PF00072 Response regulator receiver domain D7A46_13945 PF01627 Hpt domain D7A46_13945 PF00512 His Kinase A (phospho-acceptor) domain D7A46_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_13945 PF00672 HAMP domain D7A46_13945 PF00072 Response regulator receiver domain D7A46_13950 PF04341 Protein of unknown function, DUF485 D7A46_13955 PF00474 Sodium:solute symporter family D7A46_13965 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_13975 PF17158 Membrane-associated sensor, integral membrane domain D7A46_13975 PF00990 Diguanylate cyclase, GGDEF domain D7A46_13985 PF00005 ABC transporter D7A46_13985 PF17755 UvrA DNA-binding domain D7A46_13985 PF17760 UvrA interaction domain D7A46_13990 PF00440 Bacterial regulatory proteins, tetR family D7A46_13990 PF16925 Tetracyclin repressor-like, C-terminal domain D7A46_13995 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_13995 PF00107 Zinc-binding dehydrogenase D7A46_14005 PF06942 GlpM protein D7A46_14010 PF02581 Thiamine monophosphate synthase D7A46_14010 PF08543 Phosphomethylpyrimidine kinase D7A46_14010 PF03070 TENA/THI-4/PQQC family D7A46_14020 PF07690 Major Facilitator Superfamily D7A46_14025 PF00436 Single-strand binding protein family D7A46_14035 PF03591 AzlC protein D7A46_14045 PF00324 Amino acid permease D7A46_14050 PF00155 Aminotransferase class I and II D7A46_14050 PF00392 Bacterial regulatory proteins, gntR family D7A46_14055 PF00202 Aminotransferase class-III D7A46_14060 PF00171 Aldehyde dehydrogenase family D7A46_14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_14070 PF00857 Isochorismatase family D7A46_14075 PF05726 Pirin C-terminal cupin domain D7A46_14075 PF02678 Pirin D7A46_14080 PF01593 Flavin containing amine oxidoreductase D7A46_14100 PF07690 Major Facilitator Superfamily D7A46_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_14105 PF03466 LysR substrate binding domain D7A46_14125 PF00248 Aldo/keto reductase family D7A46_14130 PF12833 Helix-turn-helix domain D7A46_14130 PF02311 AraC-like ligand binding domain D7A46_14160 PF01638 HxlR-like helix-turn-helix D7A46_14170 PF02525 Flavodoxin-like fold D7A46_14190 PF02705 K+ potassium transporter D7A46_14215 PF00230 Major intrinsic protein D7A46_14230 PF00977 Histidine biosynthesis protein D7A46_14235 PF01636 Phosphotransferase enzyme family D7A46_14250 PF03992 Antibiotic biosynthesis monooxygenase D7A46_14265 PF00977 Histidine biosynthesis protein D7A46_14280 PF00117 Glutamine amidotransferase class-I D7A46_14285 PF00475 Imidazoleglycerol-phosphate dehydratase D7A46_14305 PF00583 Acetyltransferase (GNAT) family D7A46_14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_14320 PF00672 HAMP domain D7A46_14320 PF00512 His Kinase A (phospho-acceptor) domain D7A46_14325 PF00072 Response regulator receiver domain D7A46_14325 PF00486 Transcriptional regulatory protein, C terminal D7A46_14330 PF00575 S1 RNA binding domain D7A46_14330 PF17674 HHH domain D7A46_14330 PF16921 Tex protein YqgF-like domain D7A46_14330 PF09371 Tex-like protein N-terminal domain D7A46_14335 PF00916 Sulfate permease family D7A46_14335 PF01740 STAS domain D7A46_14340 PF00106 short chain dehydrogenase D7A46_14345 PF01053 Cys/Met metabolism PLP-dependent enzyme D7A46_14350 PF00005 ABC transporter D7A46_14350 PF12848 ABC transporter D7A46_14375 PF04191 Phospholipid methyltransferase D7A46_14395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_14395 PF00529 HlyD membrane-fusion protein of T1SS D7A46_14400 PF00873 AcrB/AcrD/AcrF family D7A46_14405 PF01545 Cation efflux family D7A46_14435 PF00324 Amino acid permease D7A46_14450 PF00749 tRNA synthetases class I (E and Q), catalytic domain D7A46_14465 PF01795 MraW methylase family D7A46_14475 PF03717 Penicillin-binding Protein dimerisation domain D7A46_14475 PF00905 Penicillin binding protein transpeptidase domain D7A46_14480 PF08245 Mur ligase middle domain D7A46_14480 PF02875 Mur ligase family, glutamate ligase domain D7A46_14480 PF01225 Mur ligase family, catalytic domain D7A46_14485 PF01225 Mur ligase family, catalytic domain D7A46_14485 PF02875 Mur ligase family, glutamate ligase domain D7A46_14485 PF08245 Mur ligase middle domain D7A46_14490 PF00953 Glycosyl transferase family 4 D7A46_14500 PF13847 Methyltransferase domain D7A46_14505 PF17092 Penicillin-binding protein OB-like domain D7A46_14505 PF00912 Transglycosylase D7A46_14505 PF00905 Penicillin binding protein transpeptidase domain D7A46_14530 PF11741 AMIN domain D7A46_14530 PF00263 Bacterial type II and III secretion system protein D7A46_14530 PF03958 Bacterial type II/III secretion system short domain D7A46_14530 PF07660 Secretin and TonB N terminus short domain D7A46_14535 PF01202 Shikimate kinase D7A46_14540 PF01761 3-dehydroquinate synthase D7A46_14550 PF04898 Glutamate synthase central domain D7A46_14550 PF00310 Glutamine amidotransferases class-II D7A46_14550 PF01493 GXGXG motif D7A46_14550 PF01645 Conserved region in glutamate synthase D7A46_14555 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_14555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D7A46_14565 PF04011 LemA family D7A46_14570 PF04536 TPM domain D7A46_14590 PF11846 Virulence factor membrane-bound polymerase, C-terminal D7A46_14590 PF04932 O-Antigen ligase D7A46_14590 PF15864 Protein glycosylation ligase D7A46_14595 PF00210 Ferritin-like domain D7A46_14600 PF04324 BFD-like [2Fe-2S] binding domain D7A46_14605 PF01042 Endoribonuclease L-PSP D7A46_14610 PF02824 TGS domain D7A46_14610 PF13291 ACT domain D7A46_14610 PF04607 Region found in RelA / SpoT proteins D7A46_14620 PF01192 RNA polymerase Rpb6 D7A46_14625 PF00625 Guanylate kinase D7A46_14630 PF02401 LytB protein D7A46_14670 PF00886 Ribosomal protein S16 D7A46_14675 PF01782 RimM N-terminal domain D7A46_14675 PF05239 PRC-barrel domain D7A46_14680 PF01746 tRNA (Guanine-1)-methyltransferase D7A46_14685 PF01245 Ribosomal protein L19 D7A46_14690 PF00561 alpha/beta hydrolase fold D7A46_14695 PF03280 Proteobacterial lipase chaperone protein D7A46_14700 PF01509 TruB family pseudouridylate synthase (N terminal domain) D7A46_14700 PF16198 tRNA pseudouridylate synthase B C-terminal domain D7A46_14700 PF09157 Pseudouridine synthase II TruB, C-terminal D7A46_14705 PF01925 Sulfite exporter TauE/SafE D7A46_14715 PF00892 EamA-like transporter family D7A46_14720 PF00892 EamA-like transporter family D7A46_14725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D7A46_14725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D7A46_14730 PF02913 FAD linked oxidases, C-terminal domain D7A46_14730 PF01565 FAD binding domain D7A46_14740 PF03992 Antibiotic biosynthesis monooxygenase D7A46_14745 PF02525 Flavodoxin-like fold D7A46_14755 PF07690 Major Facilitator Superfamily D7A46_14760 PF12805 FUSC-like inner membrane protein yccS D7A46_14765 PF00080 Copper/zinc superoxide dismutase (SODC) D7A46_14770 PF01594 AI-2E family transporter D7A46_14775 PF13614 AAA domain D7A46_14805 PF00324 Amino acid permease D7A46_14810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D7A46_14810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D7A46_14815 PF00202 Aminotransferase class-III D7A46_14820 PF04958 Arginine N-succinyltransferase beta subunit D7A46_14825 PF00171 Aldehyde dehydrogenase family D7A46_14830 PF04996 Succinylarginine dihydrolase D7A46_14835 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D7A46_14865 PF03466 LysR substrate binding domain D7A46_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_14870 PF00892 EamA-like transporter family D7A46_14880 PF02092 Glycyl-tRNA synthetase beta subunit D7A46_14880 PF05746 DALR anticodon binding domain D7A46_14885 PF02091 Glycyl-tRNA synthetase alpha subunit D7A46_14910 PF00571 CBS domain D7A46_14915 PF04024 PspC domain D7A46_14925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_14925 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_14925 PF12806 Acetyl-CoA dehydrogenase C-terminal like D7A46_14925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_14935 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D7A46_14935 PF01488 Shikimate / quinate 5-dehydrogenase D7A46_14935 PF08501 Shikimate dehydrogenase substrate binding domain D7A46_14940 PF01218 Coproporphyrinogen III oxidase D7A46_14945 PF00925 GTP cyclohydrolase II D7A46_14950 PF02780 Transketolase, C-terminal domain D7A46_14950 PF02779 Transketolase, pyrimidine binding domain D7A46_14950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D7A46_14955 PF00459 Inositol monophosphatase family D7A46_14960 PF00270 DEAD/DEAH box helicase D7A46_14960 PF12343 Cold shock protein DEAD box A D7A46_14960 PF00271 Helicase conserved C-terminal domain D7A46_14960 PF03880 DbpA RNA binding domain D7A46_14965 PF00005 ABC transporter D7A46_14970 PF02405 Permease MlaE D7A46_14980 PF05494 MlaC protein D7A46_14990 PF01544 CorA-like Mg2+ transporter protein D7A46_14995 PF03641 Possible lysine decarboxylase D7A46_15000 PF00293 NUDIX domain D7A46_15005 PF00156 Phosphoribosyl transferase domain D7A46_15010 PF00270 DEAD/DEAH box helicase D7A46_15010 PF17191 RecG wedge domain D7A46_15010 PF00271 Helicase conserved C-terminal domain D7A46_15025 PF01553 Acyltransferase D7A46_15035 PF00375 Sodium:dicarboxylate symporter family D7A46_15045 PF01926 50S ribosome-binding GTPase D7A46_15050 PF02082 Transcriptional regulator D7A46_15055 PF00175 Oxidoreductase NAD-binding domain D7A46_15055 PF00042 Globin D7A46_15055 PF00970 Oxidoreductase FAD-binding domain D7A46_15060 PF05872 Bacterial protein of unknown function (DUF853) D7A46_15065 PF01053 Cys/Met metabolism PLP-dependent enzyme D7A46_15070 PF00117 Glutamine amidotransferase class-I D7A46_15075 PF00338 Ribosomal protein S10p/S20e D7A46_15080 PF00297 Ribosomal protein L3 D7A46_15085 PF00573 Ribosomal protein L4/L1 family D7A46_15090 PF00276 Ribosomal protein L23 D7A46_15095 PF00181 Ribosomal Proteins L2, RNA binding domain D7A46_15095 PF03947 Ribosomal Proteins L2, C-terminal domain D7A46_15100 PF00203 Ribosomal protein S19 D7A46_15105 PF00237 Ribosomal protein L22p/L17e D7A46_15110 PF07650 KH domain D7A46_15110 PF00189 Ribosomal protein S3, C-terminal domain D7A46_15115 PF00252 Ribosomal protein L16p/L10e D7A46_15120 PF00831 Ribosomal L29 protein D7A46_15125 PF00366 Ribosomal protein S17 D7A46_15130 PF00238 Ribosomal protein L14p/L23e D7A46_15135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D7A46_15135 PF00467 KOW motif D7A46_15140 PF00281 Ribosomal protein L5 D7A46_15140 PF00673 ribosomal L5P family C-terminus D7A46_15145 PF00253 Ribosomal protein S14p/S29e D7A46_15150 PF00410 Ribosomal protein S8 D7A46_15155 PF00347 Ribosomal protein L6 D7A46_15160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D7A46_15165 PF03719 Ribosomal protein S5, C-terminal domain D7A46_15165 PF00333 Ribosomal protein S5, N-terminal domain D7A46_15170 PF00327 Ribosomal protein L30p/L7e D7A46_15175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D7A46_15180 PF00344 SecY translocase D7A46_15185 PF00444 Ribosomal protein L36 D7A46_15190 PF00416 Ribosomal protein S13/S18 D7A46_15195 PF00411 Ribosomal protein S11 D7A46_15200 PF01479 S4 domain D7A46_15200 PF00163 Ribosomal protein S4/S9 N-terminal domain D7A46_15205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D7A46_15205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D7A46_15205 PF01000 RNA polymerase Rpb3/RpoA insert domain D7A46_15210 PF01196 Ribosomal protein L17 D7A46_15215 PF00743 Flavin-binding monooxygenase-like D7A46_15220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_15220 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_15220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_15225 PF03937 Flavinator of succinate dehydrogenase D7A46_15255 PF09526 Probable metal-binding protein (DUF2387) D7A46_15260 PF01432 Peptidase family M3 D7A46_15265 PF00773 RNB domain D7A46_15265 PF08206 Ribonuclease B OB domain D7A46_15265 PF08461 Ribonuclease R winged-helix domain D7A46_15265 PF17876 Cold shock domain D7A46_15265 PF00575 S1 RNA binding domain D7A46_15310 PF01557 Fumarylacetoacetate (FAA) hydrolase family D7A46_15315 PF12833 Helix-turn-helix domain D7A46_15320 PF00892 EamA-like transporter family D7A46_15325 PF03631 Virulence factor BrkB D7A46_15330 PF03358 NADPH-dependent FMN reductase D7A46_15355 PF02130 Uncharacterized protein family UPF0054 D7A46_15360 PF02562 PhoH-like protein D7A46_15365 PF04055 Radical SAM superfamily D7A46_15365 PF01938 TRAM domain D7A46_15365 PF00919 Uncharacterized protein family UPF0004 D7A46_15370 PF01464 Transglycosylase SLT domain D7A46_15370 PF10145 Phage-related minor tail protein D7A46_15370 PF01551 Peptidase family M23 D7A46_15380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D7A46_15380 PF00056 lactate/malate dehydrogenase, NAD binding domain D7A46_15400 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D7A46_15405 PF01066 CDP-alcohol phosphatidyltransferase D7A46_15450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_15450 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_15450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_15455 PF00440 Bacterial regulatory proteins, tetR family D7A46_15455 PF17932 Tetracyclin repressor-like, C-terminal domain D7A46_15470 PF01039 Carboxyl transferase domain D7A46_15475 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_15475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_15475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_15485 PF02785 Biotin carboxylase C-terminal domain D7A46_15485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_15485 PF00289 Biotin carboxylase, N-terminal domain D7A46_15485 PF00364 Biotin-requiring enzyme D7A46_15495 PF04386 Stringent starvation protein B D7A46_15500 PF00043 Glutathione S-transferase, C-terminal domain D7A46_15500 PF13417 Glutathione S-transferase, N-terminal domain D7A46_15505 PF00380 Ribosomal protein S9/S16 D7A46_15510 PF00572 Ribosomal protein L13 D7A46_15515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D7A46_15520 PF00398 Ribosomal RNA adenine dimethylase D7A46_15525 PF00149 Calcineurin-like phosphoesterase D7A46_15545 PF13167 GTP-binding GTPase N-terminal D7A46_15545 PF01926 50S ribosome-binding GTPase D7A46_15545 PF16360 GTP-binding GTPase Middle Region D7A46_15555 PF13091 PLD-like domain D7A46_15560 PF10518 TAT (twin-arginine translocation) pathway signal sequence D7A46_15560 PF00149 Calcineurin-like phosphoesterase D7A46_15565 PF00691 OmpA family D7A46_15565 PF01389 OmpA-like transmembrane domain D7A46_15570 PF00990 Diguanylate cyclase, GGDEF domain D7A46_15570 PF17152 Periplasmic sensor domain D7A46_15605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D7A46_15605 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_15615 PF00753 Metallo-beta-lactamase superfamily D7A46_15615 PF04273 Putative phosphatase (DUF442) D7A46_15620 PF00561 alpha/beta hydrolase fold D7A46_15625 PF00085 Thioredoxin D7A46_15630 PF03061 Thioesterase superfamily D7A46_15640 PF04461 Protein of unknown function (DUF520) D7A46_15650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D7A46_15650 PF01266 FAD dependent oxidoreductase D7A46_15660 PF03795 YCII-related domain D7A46_15665 PF04279 Intracellular septation protein A D7A46_15670 PF02811 PHP domain D7A46_15675 PF01062 Bestrophin, RFP-TM, chloride channel D7A46_15680 PF04002 RadC-like JAB domain D7A46_15685 PF02441 Flavoprotein D7A46_15685 PF04127 DNA / pantothenate metabolism flavoprotein D7A46_15690 PF02355 Protein export membrane protein D7A46_15690 PF07549 SecD/SecF GG Motif D7A46_15695 PF13721 SecD export protein N-terminal TM region D7A46_15695 PF02355 Protein export membrane protein D7A46_15695 PF07549 SecD/SecF GG Motif D7A46_15700 PF02699 Preprotein translocase subunit D7A46_15705 PF01702 Queuine tRNA-ribosyltransferase D7A46_15720 PF02547 Queuosine biosynthesis protein D7A46_15730 PF00512 His Kinase A (phospho-acceptor) domain D7A46_15730 PF07689 KaiB domain D7A46_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_15735 PF08335 GlnD PII-uridylyltransferase D7A46_15735 PF03710 Glutamate-ammonia ligase adenylyltransferase D7A46_15740 PF01063 Amino-transferase class IV D7A46_15755 PF01522 Polysaccharide deacetylase D7A46_15760 PF00535 Glycosyl transferase family 2 D7A46_15765 PF13439 Glycosyltransferase Family 4 D7A46_15765 PF00534 Glycosyl transferases group 1 D7A46_15790 PF17102 Stealth protein CR3, conserved region 3 D7A46_15790 PF17101 Stealth protein CR1, conserved region 1 D7A46_15790 PF11380 Stealth protein CR2, conserved region 2 D7A46_15795 PF00152 tRNA synthetases class II (D, K and N) D7A46_15795 PF02938 GAD domain D7A46_15795 PF01336 OB-fold nucleic acid binding domain D7A46_15805 PF07715 TonB-dependent Receptor Plug Domain D7A46_15805 PF00593 TonB dependent receptor D7A46_15825 PF06146 Phosphate-starvation-inducible E D7A46_15830 PF02798 Glutathione S-transferase, N-terminal domain D7A46_15830 PF00043 Glutathione S-transferase, C-terminal domain D7A46_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_15835 PF03466 LysR substrate binding domain D7A46_15840 PF12806 Acetyl-CoA dehydrogenase C-terminal like D7A46_15840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_15840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_15840 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_15845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_15845 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_15845 PF12806 Acetyl-CoA dehydrogenase C-terminal like D7A46_15845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_15855 PF00512 His Kinase A (phospho-acceptor) domain D7A46_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_15855 PF00672 HAMP domain D7A46_15860 PF00486 Transcriptional regulatory protein, C terminal D7A46_15860 PF00072 Response regulator receiver domain D7A46_15865 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D7A46_15885 PF01923 Cobalamin adenosyltransferase D7A46_15890 PF00593 TonB dependent receptor D7A46_15890 PF07715 TonB-dependent Receptor Plug Domain D7A46_15895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D7A46_15900 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_15925 PF00290 Tryptophan synthase alpha chain D7A46_15930 PF01039 Carboxyl transferase domain D7A46_15935 PF08245 Mur ligase middle domain D7A46_15935 PF02875 Mur ligase family, glutamate ligase domain D7A46_15950 PF00753 Metallo-beta-lactamase superfamily D7A46_15955 PF00578 AhpC/TSA family D7A46_15955 PF10417 C-terminal domain of 1-Cys peroxiredoxin D7A46_15960 PF01043 SecA preprotein cross-linking domain D7A46_15960 PF02810 SEC-C motif D7A46_15960 PF07516 SecA Wing and Scaffold domain D7A46_15960 PF07517 SecA DEAD-like domain D7A46_15970 PF00083 Sugar (and other) transporter D7A46_15970 PF07690 Major Facilitator Superfamily D7A46_15975 PF03006 Haemolysin-III related D7A46_16000 PF00378 Enoyl-CoA hydratase/isomerase D7A46_16000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D7A46_16000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D7A46_16005 PF00108 Thiolase, N-terminal domain D7A46_16005 PF02803 Thiolase, C-terminal domain D7A46_16010 PF12833 Helix-turn-helix domain D7A46_16010 PF02311 AraC-like ligand binding domain D7A46_16015 PF02515 CoA-transferase family III D7A46_16020 PF04966 Carbohydrate-selective porin, OprB family D7A46_16025 PF01011 PQQ enzyme repeat D7A46_16030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D7A46_16030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D7A46_16040 PF00893 Small Multidrug Resistance protein D7A46_16050 PF00108 Thiolase, N-terminal domain D7A46_16050 PF02803 Thiolase, C-terminal domain D7A46_16060 PF13505 Outer membrane protein beta-barrel domain D7A46_16060 PF00691 OmpA family D7A46_16070 PF01139 tRNA-splicing ligase RtcB D7A46_16075 PF00324 Amino acid permease D7A46_16080 PF08468 Methyltransferase small domain N-terminal D7A46_16080 PF05175 Methyltransferase small domain D7A46_16085 PF00860 Permease family D7A46_16095 PF01741 Large-conductance mechanosensitive channel, MscL D7A46_16110 PF06827 Zinc finger found in FPG and IleRS D7A46_16110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D7A46_16110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D7A46_16115 PF02245 Methylpurine-DNA glycosylase (MPG) D7A46_16120 PF07715 TonB-dependent Receptor Plug Domain D7A46_16120 PF00593 TonB dependent receptor D7A46_16135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D7A46_16140 PF03547 Membrane transport protein D7A46_16150 PF13098 Thioredoxin-like domain D7A46_16150 PF10411 Disulfide bond isomerase protein N-terminus D7A46_16155 PF01571 Aminomethyltransferase folate-binding domain D7A46_16165 PF04343 Protein of unknown function, DUF488 D7A46_16170 PF03831 PhnA domain D7A46_16170 PF08274 PhnA Zinc-Ribbon D7A46_16175 PF07411 Domain of unknown function (DUF1508) D7A46_16180 PF03129 Anticodon binding domain D7A46_16180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D7A46_16180 PF04073 Aminoacyl-tRNA editing domain D7A46_16185 PF00873 AcrB/AcrD/AcrF family D7A46_16200 PF00072 Response regulator receiver domain D7A46_16205 PF00072 Response regulator receiver domain D7A46_16210 PF01584 CheW-like domain D7A46_16215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D7A46_16215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D7A46_16230 PF07687 Peptidase dimerisation domain D7A46_16230 PF01546 Peptidase family M20/M25/M40 D7A46_16235 PF08085 Entericidin EcnA/B family D7A46_16245 PF04304 Protein of unknown function (DUF454) D7A46_16250 PF17969 L,D-transpeptidase C-terminal domain D7A46_16250 PF03734 L,D-transpeptidase catalytic domain D7A46_16290 PF00175 Oxidoreductase NAD-binding domain D7A46_16290 PF00258 Flavodoxin D7A46_16290 PF00667 FAD binding domain D7A46_16300 PF12805 FUSC-like inner membrane protein yccS D7A46_16305 PF07690 Major Facilitator Superfamily D7A46_16310 PF00881 Nitroreductase family D7A46_16325 PF01235 Sodium:alanine symporter family D7A46_16330 PF01734 Patatin-like phospholipase D7A46_16335 PF00291 Pyridoxal-phosphate dependent enzyme D7A46_16335 PF13291 ACT domain D7A46_16340 PF05992 SbmA/BacA-like family D7A46_16380 PF02637 GatB domain D7A46_16380 PF02934 GatB/GatE catalytic domain D7A46_16385 PF01425 Amidase D7A46_16390 PF02686 Glu-tRNAGln amidotransferase C subunit D7A46_16400 PF04085 rod shape-determining protein MreC D7A46_16405 PF04093 rod shape-determining protein MreD D7A46_16410 PF02545 Maf-like protein D7A46_16415 PF10150 Ribonuclease E/G family D7A46_16415 PF00575 S1 RNA binding domain D7A46_16425 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain D7A46_16425 PF06974 Protein of unknown function (DUF1298) D7A46_16430 PF01507 Phosphoadenosine phosphosulfate reductase family D7A46_16445 PF02525 Flavodoxin-like fold D7A46_16465 PF02673 Bacitracin resistance protein BacA D7A46_16470 PF06719 AraC-type transcriptional regulator N-terminus D7A46_16470 PF12833 Helix-turn-helix domain D7A46_16475 PF09277 Erythronolide synthase, docking D7A46_16475 PF08990 Erythronolide synthase docking D7A46_16475 PF08659 KR domain D7A46_16475 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_16475 PF00698 Acyl transferase domain D7A46_16475 PF14765 Polyketide synthase dehydratase D7A46_16475 PF16197 Ketoacyl-synthetase C-terminal extension D7A46_16475 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_16475 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_16475 PF00550 Phosphopantetheine attachment site D7A46_16480 PF01965 DJ-1/PfpI family D7A46_16490 PF00324 Amino acid permease D7A46_16495 PF04303 PrpF protein D7A46_16500 PF00348 Polyprenyl synthetase D7A46_16505 PF04237 YjbR D7A46_16510 PF01145 SPFH domain / Band 7 family D7A46_16520 PF01734 Patatin-like phospholipase D7A46_16540 PF08019 Phosphoethanolamine transferase EptA/EptB D7A46_16540 PF00884 Sulfatase D7A46_16545 PF00072 Response regulator receiver domain D7A46_16545 PF00486 Transcriptional regulatory protein, C terminal D7A46_16550 PF00512 His Kinase A (phospho-acceptor) domain D7A46_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_16550 PF08521 Two-component sensor kinase N-terminal D7A46_16560 PF00909 Ammonium Transporter Family D7A46_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_16570 PF03466 LysR substrate binding domain D7A46_16590 PF08264 Anticodon-binding domain of tRNA D7A46_16590 PF10458 Valyl tRNA synthetase tRNA binding arm D7A46_16590 PF00133 tRNA synthetases class I (I, L, M and V) D7A46_16610 PF01906 Putative heavy-metal-binding D7A46_16615 PF01906 Putative heavy-metal-binding D7A46_16620 PF02321 Outer membrane efflux protein D7A46_16625 PF00873 AcrB/AcrD/AcrF family D7A46_16630 PF00529 HlyD membrane-fusion protein of T1SS D7A46_16630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D7A46_16635 PF01569 PAP2 superfamily D7A46_16645 PF00348 Polyprenyl synthetase D7A46_16655 PF00829 Ribosomal prokaryotic L21 protein D7A46_16660 PF01016 Ribosomal L27 protein D7A46_16665 PF03548 Outer membrane lipoprotein carrier protein LolA D7A46_16675 PF02403 Seryl-tRNA synthetase N-terminal domain D7A46_16675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D7A46_16680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D7A46_16680 PF14824 Sirohaem biosynthesis protein central D7A46_16680 PF10414 Sirohaem synthase dimerisation region D7A46_16685 PF00588 SpoU rRNA Methylase family D7A46_16690 PF01638 HxlR-like helix-turn-helix D7A46_16695 PF03358 NADPH-dependent FMN reductase D7A46_16700 PF13520 Amino acid permease D7A46_16705 PF00465 Iron-containing alcohol dehydrogenase D7A46_16715 PF03099 Biotin/lipoate A/B protein ligase family D7A46_16720 PF04359 Protein of unknown function (DUF493) D7A46_16725 PF03979 Sigma-70 factor, region 1.1 D7A46_16725 PF04546 Sigma-70, non-essential region D7A46_16725 PF00140 Sigma-70 factor, region 1.2 D7A46_16725 PF04542 Sigma-70 region 2 D7A46_16725 PF04539 Sigma-70 region 3 D7A46_16725 PF04545 Sigma-70, region 4 D7A46_16755 PF00285 Citrate synthase, C-terminal domain D7A46_16760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D7A46_16765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D7A46_16770 PF02910 Fumarate reductase flavoprotein C-term D7A46_16770 PF00890 FAD binding domain D7A46_16775 PF13085 2Fe-2S iron-sulfur cluster binding domain D7A46_16790 PF16870 2-oxoglutarate dehydrogenase C-terminal D7A46_16790 PF00676 Dehydrogenase E1 component D7A46_16790 PF02779 Transketolase, pyrimidine binding domain D7A46_16790 PF16078 2-oxoglutarate dehydrogenase N-terminus D7A46_16795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D7A46_16795 PF00364 Biotin-requiring enzyme D7A46_16795 PF02817 e3 binding domain D7A46_16800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D7A46_16800 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_16805 PF08442 ATP-grasp domain D7A46_16805 PF00549 CoA-ligase D7A46_16810 PF02629 CoA binding domain D7A46_16810 PF00549 CoA-ligase D7A46_16815 PF00579 tRNA synthetases class I (W and Y) D7A46_16820 PF05661 Protein of unknown function (DUF808) D7A46_16825 PF04228 Putative neutral zinc metallopeptidase D7A46_16875 PF09587 Bacterial capsule synthesis protein PGA_cap D7A46_16885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D7A46_16890 PF00582 Universal stress protein family D7A46_16895 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_16900 PF01272 Transcription elongation factor, GreA/GreB, C-term D7A46_16900 PF03449 Transcription elongation factor, N-terminal D7A46_16905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D7A46_16905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D7A46_16905 PF02142 MGS-like domain D7A46_16910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D7A46_16910 PF00117 Glutamine amidotransferase class-I D7A46_16925 PF01985 CRS1 / YhbY (CRM) domain D7A46_16930 PF01728 FtsJ-like methyltransferase D7A46_16935 PF06480 FtsH Extracellular D7A46_16935 PF17862 AAA+ lid domain D7A46_16935 PF00004 ATPase family associated with various cellular activities (AAA) D7A46_16935 PF01434 Peptidase family M41 D7A46_16940 PF00809 Pterin binding enzyme D7A46_16960 PF16655 PhoD-like phosphatase, N-terminal domain D7A46_16960 PF09423 PhoD-like phosphatase D7A46_16975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D7A46_16975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D7A46_16990 PF00083 Sugar (and other) transporter D7A46_16995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D7A46_16995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D7A46_17000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D7A46_17000 PF01266 FAD dependent oxidoreductase D7A46_17005 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D7A46_17005 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D7A46_17010 PF00781 Diacylglycerol kinase catalytic domain D7A46_17015 PF00149 Calcineurin-like phosphoesterase D7A46_17025 PF00166 Chaperonin 10 Kd subunit D7A46_17030 PF00118 TCP-1/cpn60 chaperonin family D7A46_17035 PF01219 Prokaryotic diacylglycerol kinase D7A46_17045 PF03009 Glycerophosphoryl diester phosphodiesterase family D7A46_17050 PF00873 AcrB/AcrD/AcrF family D7A46_17060 PF01435 Peptidase family M48 D7A46_17065 PF01464 Transglycosylase SLT domain D7A46_17075 PF01171 PP-loop family D7A46_17085 PF00497 Bacterial extracellular solute-binding proteins, family 3 D7A46_17085 PF01464 Transglycosylase SLT domain D7A46_17090 PF03449 Transcription elongation factor, N-terminal D7A46_17090 PF01272 Transcription elongation factor, GreA/GreB, C-term D7A46_17105 PF00501 AMP-binding enzyme D7A46_17105 PF00668 Condensation domain D7A46_17105 PF00975 Thioesterase domain D7A46_17105 PF13193 AMP-binding enzyme C-terminal domain D7A46_17105 PF00550 Phosphopantetheine attachment site D7A46_17135 PF00881 Nitroreductase family D7A46_17150 PF02595 Glycerate kinase family D7A46_17155 PF00384 Molybdopterin oxidoreductase D7A46_17160 PF02634 FdhD/NarQ family D7A46_17165 PF06803 Protein of unknown function (DUF1232) D7A46_17170 PF11890 Domain of unknown function (DUF3410) D7A46_17170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D7A46_17170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D7A46_17175 PF00152 tRNA synthetases class II (D, K and N) D7A46_17185 PF18073 Rubredoxin metal binding domain D7A46_17190 PF00324 Amino acid permease D7A46_17200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D7A46_17200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D7A46_17205 PF01678 Diaminopimelate epimerase D7A46_17210 PF01810 LysE type translocator D7A46_17215 PF02899 Phage integrase, N-terminal SAM-like domain D7A46_17215 PF00589 Phage integrase family D7A46_17220 PF01012 Electron transfer flavoprotein domain D7A46_17225 PF01012 Electron transfer flavoprotein domain D7A46_17225 PF00766 Electron transfer flavoprotein FAD-binding domain D7A46_17230 PF03989 DNA gyrase C-terminal domain, beta-propeller D7A46_17230 PF00521 DNA gyrase/topoisomerase IV, subunit A D7A46_17245 PF00535 Glycosyl transferase family 2 D7A46_17265 PF13533 Biotin-lipoyl like D7A46_17275 PF00266 Aminotransferase class-V D7A46_17285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D7A46_17295 PF02687 FtsX-like permease family D7A46_17295 PF12704 MacB-like periplasmic core domain D7A46_17300 PF00005 ABC transporter D7A46_17305 PF13567 Domain of unknown function (DUF4131) D7A46_17305 PF03772 Competence protein D7A46_17305 PF00753 Metallo-beta-lactamase superfamily D7A46_17315 PF06965 Na+/H+ antiporter 1 D7A46_17315 PF01343 Peptidase family S49 D7A46_17320 PF12697 Alpha/beta hydrolase family D7A46_17325 PF00551 Formyl transferase D7A46_17330 PF02769 AIR synthase related protein, C-terminal domain D7A46_17330 PF00586 AIR synthase related protein, N-terminal domain D7A46_17335 PF01594 AI-2E family transporter D7A46_17340 PF11638 DnaA N-terminal domain D7A46_17340 PF08299 Bacterial dnaA protein helix-turn-helix D7A46_17340 PF00308 Bacterial dnaA protein D7A46_17370 PF00588 SpoU rRNA Methylase family D7A46_17370 PF08032 RNA 2'-O ribose methyltransferase substrate binding D7A46_17375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D7A46_17385 PF00691 OmpA family D7A46_17390 PF04052 TolB amino-terminal domain D7A46_17390 PF07676 WD40-like Beta Propeller Repeat D7A46_17400 PF02472 Biopolymer transport protein ExbD/TolR D7A46_17405 PF01618 MotA/TolQ/ExbB proton channel family D7A46_17410 PF03061 Thioesterase superfamily D7A46_17415 PF07687 Peptidase dimerisation domain D7A46_17415 PF01546 Peptidase family M20/M25/M40 D7A46_17420 PF05496 Holliday junction DNA helicase RuvB P-loop domain D7A46_17420 PF17864 RuvB AAA lid domain D7A46_17420 PF05491 RuvB C-terminal winged helix domain D7A46_17425 PF07499 RuvA, C-terminal domain D7A46_17425 PF01330 RuvA N terminal domain D7A46_17430 PF01966 HD domain D7A46_17435 PF02769 AIR synthase related protein, C-terminal domain D7A46_17435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D7A46_17435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D7A46_17440 PF07690 Major Facilitator Superfamily D7A46_17445 PF01784 NIF3 (NGG1p interacting factor 3) D7A46_17450 PF00378 Enoyl-CoA hydratase/isomerase D7A46_17455 PF01467 Cytidylyltransferase-like D7A46_17455 PF00293 NUDIX domain D7A46_17465 PF00578 AhpC/TSA family D7A46_17480 PF06508 Queuosine biosynthesis protein QueC D7A46_17490 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_17490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D7A46_17490 PF14602 Hexapeptide repeat of succinyl-transferase D7A46_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_17500 PF03466 LysR substrate binding domain D7A46_17505 PF12857 TOBE-like domain D7A46_17505 PF00005 ABC transporter D7A46_17510 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_17515 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_17530 PF01063 Amino-transferase class IV D7A46_17535 PF02618 YceG-like family D7A46_17540 PF02223 Thymidylate kinase D7A46_17550 PF02910 Fumarate reductase flavoprotein C-term D7A46_17550 PF00890 FAD binding domain D7A46_17555 PF13180 PDZ domain D7A46_17565 PF06421 GTP-binding protein LepA C-terminus D7A46_17565 PF00009 Elongation factor Tu GTP binding domain D7A46_17565 PF00679 Elongation factor G C-terminus D7A46_17565 PF03144 Elongation factor Tu domain 2 D7A46_17570 PF10502 Signal peptidase, peptidase S26 D7A46_17580 PF14622 Ribonuclease-III-like D7A46_17580 PF00035 Double-stranded RNA binding motif D7A46_17585 PF07650 KH domain D7A46_17585 PF01926 50S ribosome-binding GTPase D7A46_17595 PF11967 Recombination protein O N terminal D7A46_17595 PF02565 Recombination protein O C terminal D7A46_17600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D7A46_17605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D7A46_17610 PF00106 short chain dehydrogenase D7A46_17650 PF00990 Diguanylate cyclase, GGDEF domain D7A46_17650 PF17151 Periplasmic sensor domain D7A46_17660 PF02151 UvrB/uvrC motif D7A46_17660 PF12344 Ultra-violet resistance protein B D7A46_17660 PF00271 Helicase conserved C-terminal domain D7A46_17660 PF17757 UvrB interaction domain D7A46_17660 PF04851 Type III restriction enzyme, res subunit D7A46_17670 PF00892 EamA-like transporter family D7A46_17675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D7A46_17675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D7A46_17690 PF01018 GTP1/OBG D7A46_17690 PF01926 50S ribosome-binding GTPase D7A46_17695 PF00696 Amino acid kinase family D7A46_17695 PF01472 PUA domain D7A46_17705 PF07759 Protein of unknown function (DUF1615) D7A46_17710 PF01207 Dihydrouridine synthase (Dus) D7A46_17715 PF03060 Nitronate monooxygenase D7A46_17730 PF02350 UDP-N-acetylglucosamine 2-epimerase D7A46_17760 PF03441 FAD binding domain of DNA photolyase D7A46_17760 PF00875 DNA photolyase D7A46_17765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D7A46_17770 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_17775 PF00768 D-alanyl-D-alanine carboxypeptidase D7A46_17775 PF07943 Penicillin-binding protein 5, C-terminal domain D7A46_17785 PF03971 Monomeric isocitrate dehydrogenase D7A46_17790 PF00849 RNA pseudouridylate synthase D7A46_17795 PF00180 Isocitrate/isopropylmalate dehydrogenase D7A46_17815 PF06779 Uncharacterised MFS-type transporter YbfB D7A46_17820 PF03466 LysR substrate binding domain D7A46_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_17830 PF02567 Phenazine biosynthesis-like protein D7A46_17835 PF05193 Peptidase M16 inactive domain D7A46_17835 PF00675 Insulinase (Peptidase family M16) D7A46_17860 PF02581 Thiamine monophosphate synthase D7A46_17865 PF00202 Aminotransferase class-III D7A46_17875 PF00849 RNA pseudouridylate synthase D7A46_17880 PF12137 RNA polymerase recycling family C-terminal D7A46_17880 PF00176 SNF2 family N-terminal domain D7A46_17880 PF18339 RapA N-terminal Tudor like domain 1 D7A46_17880 PF18337 RapA N-terminal Tudor like domain D7A46_17880 PF00271 Helicase conserved C-terminal domain D7A46_17890 PF00440 Bacterial regulatory proteins, tetR family D7A46_17895 PF00175 Oxidoreductase NAD-binding domain D7A46_17895 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_17895 PF00970 Oxidoreductase FAD-binding domain D7A46_17900 PF00487 Fatty acid desaturase D7A46_17910 PF00440 Bacterial regulatory proteins, tetR family D7A46_17910 PF17754 MftR C-terminal domain D7A46_17920 PF00202 Aminotransferase class-III D7A46_17925 PF00282 Pyridoxal-dependent decarboxylase conserved domain D7A46_17930 PF00171 Aldehyde dehydrogenase family D7A46_17935 PF01037 Lrp/AsnC ligand binding domain D7A46_17940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D7A46_17940 PF00205 Thiamine pyrophosphate enzyme, central domain D7A46_17940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D7A46_17945 PF00324 Amino acid permease D7A46_17950 PF12849 PBP superfamily domain D7A46_17955 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_17960 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_17965 PF00005 ABC transporter D7A46_17970 PF08496 Peptidase family S49 N-terminal D7A46_17970 PF01343 Peptidase family S49 D7A46_17980 PF00872 Transposase, Mutator family D7A46_17990 PF08328 Adenylosuccinate lyase C-terminal D7A46_17990 PF00206 Lyase D7A46_17995 PF04356 Protein of unknown function (DUF489) D7A46_18005 PF00293 NUDIX domain D7A46_18005 PF13344 Haloacid dehalogenase-like hydrolase D7A46_18010 PF00132 Bacterial transferase hexapeptide (six repeats) D7A46_18015 PF00768 D-alanyl-D-alanine carboxypeptidase D7A46_18015 PF07943 Penicillin-binding protein 5, C-terminal domain D7A46_18030 PF01975 Survival protein SurE D7A46_18035 PF01551 Peptidase family M23 D7A46_18035 PF01476 LysM domain D7A46_18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_18040 PF03466 LysR substrate binding domain D7A46_18045 PF13654 AAA domain D7A46_18045 PF05362 Lon protease (S16) C-terminal proteolytic domain D7A46_18050 PF07690 Major Facilitator Superfamily D7A46_18055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D7A46_18060 PF13593 SBF-like CPA transporter family (DUF4137) D7A46_18065 PF01197 Ribosomal protein L31 D7A46_18080 PF04055 Radical SAM superfamily D7A46_18085 PF01132 Elongation factor P (EF-P) OB domain D7A46_18085 PF08207 Elongation factor P (EF-P) KOW-like domain D7A46_18085 PF09285 Elongation factor P, C-terminal D7A46_18090 PF02554 Carbon starvation protein CstA D7A46_18090 PF13722 5TM C-terminal transporter carbon starvation CstA D7A46_18095 PF04328 Selenoprotein, putative D7A46_18130 PF13556 PucR C-terminal helix-turn-helix domain D7A46_18130 PF17853 GGDEF-like domain D7A46_18130 PF06018 CodY GAF-like domain D7A46_18145 PF00171 Aldehyde dehydrogenase family D7A46_18150 PF00324 Amino acid permease D7A46_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_18155 PF03466 LysR substrate binding domain D7A46_18160 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_18165 PF02028 BCCT, betaine/carnitine/choline family transporter D7A46_18170 PF00355 Rieske [2Fe-2S] domain D7A46_18170 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D7A46_18180 PF18113 Rubredoxin binding C-terminal domain D7A46_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_18185 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D7A46_18185 PF01266 FAD dependent oxidoreductase D7A46_18205 PF00892 EamA-like transporter family D7A46_18215 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D7A46_18220 PF00083 Sugar (and other) transporter D7A46_18225 PF13378 Enolase C-terminal domain-like D7A46_18225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D7A46_18230 PF16197 Ketoacyl-synthetase C-terminal extension D7A46_18230 PF09277 Erythronolide synthase, docking D7A46_18230 PF08990 Erythronolide synthase docking D7A46_18230 PF08240 Alcohol dehydrogenase GroES-like domain D7A46_18230 PF02801 Beta-ketoacyl synthase, C-terminal domain D7A46_18230 PF08659 KR domain D7A46_18230 PF00698 Acyl transferase domain D7A46_18230 PF00550 Phosphopantetheine attachment site D7A46_18230 PF00109 Beta-ketoacyl synthase, N-terminal domain D7A46_18230 PF14765 Polyketide synthase dehydratase D7A46_18235 PF00440 Bacterial regulatory proteins, tetR family D7A46_18255 PF02678 Pirin D7A46_18255 PF17954 Quercetinase C-terminal cupin domain D7A46_18265 PF08348 YheO-like PAS domain D7A46_18265 PF13309 HTH domain D7A46_18275 PF00550 Phosphopantetheine attachment site D7A46_18275 PF00501 AMP-binding enzyme D7A46_18275 PF00668 Condensation domain D7A46_18275 PF13193 AMP-binding enzyme C-terminal domain D7A46_18280 PF00501 AMP-binding enzyme D7A46_18280 PF13193 AMP-binding enzyme C-terminal domain D7A46_18280 PF00975 Thioesterase domain D7A46_18280 PF00668 Condensation domain D7A46_18280 PF00550 Phosphopantetheine attachment site D7A46_18285 PF01032 FecCD transport family D7A46_18290 PF01032 FecCD transport family D7A46_18295 PF00005 ABC transporter D7A46_18300 PF01497 Periplasmic binding protein D7A46_18305 PF07715 TonB-dependent Receptor Plug Domain D7A46_18305 PF00593 TonB dependent receptor D7A46_18310 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D7A46_18315 PF00501 AMP-binding enzyme D7A46_18315 PF00668 Condensation domain D7A46_18315 PF00550 Phosphopantetheine attachment site D7A46_18320 PF13193 AMP-binding enzyme C-terminal domain D7A46_18320 PF00501 AMP-binding enzyme D7A46_18325 PF00857 Isochorismatase family D7A46_18325 PF00550 Phosphopantetheine attachment site D7A46_18330 PF00282 Pyridoxal-dependent decarboxylase conserved domain D7A46_18340 PF00005 ABC transporter D7A46_18340 PF00664 ABC transporter transmembrane region D7A46_18345 PF00664 ABC transporter transmembrane region D7A46_18345 PF00005 ABC transporter D7A46_18350 PF00975 Thioesterase domain D7A46_18360 PF00425 chorismate binding enzyme D7A46_18370 PF01208 Uroporphyrinogen decarboxylase (URO-D) D7A46_18375 PF05675 Protein of unknown function (DUF817) D7A46_18390 PF00144 Beta-lactamase D7A46_18405 PF00111 2Fe-2S iron-sulfur cluster binding domain D7A46_18405 PF01799 [2Fe-2S] binding domain D7A46_18410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D7A46_18410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D7A46_18425 PF00218 Indole-3-glycerol phosphate synthase D7A46_18430 PF00591 Glycosyl transferase family, a/b domain D7A46_18430 PF02885 Glycosyl transferase family, helical bundle domain D7A46_18435 PF00593 TonB dependent receptor D7A46_18435 PF07715 TonB-dependent Receptor Plug Domain D7A46_18440 PF11838 ERAP1-like C-terminal domain D7A46_18440 PF01433 Peptidase family M1 domain D7A46_18445 PF00117 Glutamine amidotransferase class-I D7A46_18455 PF00854 POT family D7A46_18465 PF04345 Chorismate lyase D7A46_18470 PF01040 UbiA prenyltransferase family D7A46_18505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D7A46_18505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D7A46_18510 PF01784 NIF3 (NGG1p interacting factor 3) D7A46_18515 PF13180 PDZ domain D7A46_18520 PF12627 Probable RNA and SrmB- binding site of polymerase A D7A46_18520 PF01743 Poly A polymerase head domain D7A46_18525 PF00390 Malic enzyme, N-terminal domain D7A46_18525 PF03949 Malic enzyme, NAD binding domain D7A46_18525 PF01515 Phosphate acetyl/butaryl transferase D7A46_18530 PF03707 Bacterial signalling protein N terminal repeat D7A46_18530 PF00563 EAL domain D7A46_18530 PF00990 Diguanylate cyclase, GGDEF domain D7A46_18535 PF04452 RNA methyltransferase D7A46_18540 PF02219 Methylenetetrahydrofolate reductase D7A46_18545 PF05221 S-adenosyl-L-homocysteine hydrolase D7A46_18545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D7A46_18560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_18560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_18560 PF09317 Domain of unknown function (DUF1974) D7A46_18565 PF04055 Radical SAM superfamily D7A46_18570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D7A46_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase D7A46_18580 PF07690 Major Facilitator Superfamily D7A46_18590 PF00557 Metallopeptidase family M24 D7A46_18595 PF00318 Ribosomal protein S2 D7A46_18600 PF00889 Elongation factor TS D7A46_18610 PF12833 Helix-turn-helix domain D7A46_18630 PF05036 Sporulation related domain D7A46_18630 PF03330 Lytic transglycolase D7A46_18635 PF13406 Transglycosylase SLT domain D7A46_18640 PF01098 Cell cycle protein D7A46_18650 PF14489 QueF-like protein D7A46_18650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D7A46_18655 PF01061 ABC-2 type transporter D7A46_18660 PF00005 ABC transporter D7A46_18690 PF00464 Serine hydroxymethyltransferase D7A46_18695 PF02321 Outer membrane efflux protein D7A46_18700 PF00873 AcrB/AcrD/AcrF family D7A46_18705 PF13533 Biotin-lipoyl like D7A46_18710 PF03466 LysR substrate binding domain D7A46_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_18715 PF00497 Bacterial extracellular solute-binding proteins, family 3 D7A46_18720 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_18725 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_18730 PF00005 ABC transporter D7A46_18735 PF00893 Small Multidrug Resistance protein D7A46_18740 PF00037 4Fe-4S binding domain D7A46_18750 PF00155 Aminotransferase class I and II D7A46_18750 PF00392 Bacterial regulatory proteins, gntR family D7A46_18755 PF02567 Phenazine biosynthesis-like protein D7A46_18760 PF00970 Oxidoreductase FAD-binding domain D7A46_18760 PF00175 Oxidoreductase NAD-binding domain D7A46_18765 PF01980 tRNA-methyltransferase O D7A46_18765 PF18389 TrmO C-terminal domain D7A46_18775 PF00437 Type II/IV secretion system protein D7A46_18785 PF00486 Transcriptional regulatory protein, C terminal D7A46_18785 PF00072 Response regulator receiver domain D7A46_18790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D7A46_18790 PF00512 His Kinase A (phospho-acceptor) domain D7A46_18790 PF08521 Two-component sensor kinase N-terminal D7A46_18800 PF00293 NUDIX domain D7A46_18810 PF14814 Bifunctional transglycosylase second domain D7A46_18810 PF00912 Transglycosylase D7A46_18810 PF00905 Penicillin binding protein transpeptidase domain D7A46_18815 PF01513 ATP-NAD kinase D7A46_18820 PF07023 Protein of unknown function (DUF1315) D7A46_18825 PF00591 Glycosyl transferase family, a/b domain D7A46_18825 PF02885 Glycosyl transferase family, helical bundle domain D7A46_18835 PF00375 Sodium:dicarboxylate symporter family D7A46_18840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_18840 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_18840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_18845 PF00756 Putative esterase D7A46_18850 PF00800 Prephenate dehydratase D7A46_18850 PF01817 Chorismate mutase type II D7A46_18850 PF01842 ACT domain D7A46_18855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D7A46_18865 PF01546 Peptidase family M20/M25/M40 D7A46_18865 PF07687 Peptidase dimerisation domain D7A46_18870 PF12706 Beta-lactamase superfamily domain D7A46_18880 PF03883 Peroxide stress protein YaaA D7A46_18890 PF05690 Thiazole biosynthesis protein ThiG D7A46_18900 PF04241 Protein of unknown function (DUF423) D7A46_18905 PF00140 Sigma-70 factor, region 1.2 D7A46_18905 PF04545 Sigma-70, region 4 D7A46_18905 PF04542 Sigma-70 region 2 D7A46_18915 PF00313 'Cold-shock' DNA-binding domain D7A46_18920 PF00270 DEAD/DEAH box helicase D7A46_18920 PF00271 Helicase conserved C-terminal domain D7A46_18930 PF00881 Nitroreductase family D7A46_18935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D7A46_18935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D7A46_18955 PF01180 Dihydroorotate dehydrogenase D7A46_18960 PF02674 Colicin V production protein D7A46_18965 PF00156 Phosphoribosyl transferase domain D7A46_18980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D7A46_18980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D7A46_18985 PF01435 Peptidase family M48 D7A46_18990 PF09424 Yqey-like protein D7A46_18995 PF01165 Ribosomal protein S21 D7A46_19000 PF00814 Glycoprotease family D7A46_19020 PF00069 Protein kinase domain D7A46_19045 PF03466 LysR substrate binding domain D7A46_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_19050 PF00202 Aminotransferase class-III D7A46_19055 PF00171 Aldehyde dehydrogenase family D7A46_19060 PF00324 Amino acid permease D7A46_19090 PF04076 Bacterial OB fold (BOF) protein D7A46_19115 PF00561 alpha/beta hydrolase fold D7A46_19120 PF03616 Sodium/glutamate symporter D7A46_19130 PF00392 Bacterial regulatory proteins, gntR family D7A46_19130 PF07729 FCD domain D7A46_19180 PF08946 Osmosensory transporter coiled coil D7A46_19180 PF00083 Sugar (and other) transporter D7A46_19205 PF00155 Aminotransferase class I and II D7A46_19210 PF02080 TrkA-C domain D7A46_19210 PF06826 Predicted Permease Membrane Region D7A46_19220 PF04403 Paraquat-inducible protein A D7A46_19225 PF02470 MlaD protein D7A46_19245 PF07091 Ribosomal RNA methyltransferase (FmrO) D7A46_19270 PF01636 Phosphotransferase enzyme family D7A46_19280 PF03050 Transposase IS66 family D7A46_19280 PF13817 IS66 C-terminal element D7A46_19280 PF13007 Transposase C of IS166 homeodomain D7A46_19280 PF13005 zinc-finger binding domain of transposase IS66 D7A46_19305 PF13610 DDE domain D7A46_19320 PF00375 Sodium:dicarboxylate symporter family D7A46_19330 PF16123 Hydroxyacylglutathione hydrolase C-terminus D7A46_19330 PF00753 Metallo-beta-lactamase superfamily D7A46_19335 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_19340 PF09383 NIL domain D7A46_19340 PF00005 ABC transporter D7A46_19345 PF03180 NLPA lipoprotein D7A46_19350 PF02844 Phosphoribosylglycinamide synthetase, N domain D7A46_19350 PF02843 Phosphoribosylglycinamide synthetase, C domain D7A46_19350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D7A46_19355 PF01808 AICARFT/IMPCHase bienzyme D7A46_19355 PF02142 MGS-like domain D7A46_19360 PF02954 Bacterial regulatory protein, Fis family D7A46_19380 PF01134 Glucose inhibited division protein A D7A46_19380 PF13932 GidA associated domain D7A46_19390 PF14403 Circularly permuted ATP-grasp type 2 D7A46_19400 PF08379 Bacterial transglutaminase-like N-terminal region D7A46_19400 PF01841 Transglutaminase-like superfamily D7A46_19410 PF00842 Alanine racemase, C-terminal domain D7A46_19410 PF01168 Alanine racemase, N-terminal domain D7A46_19415 PF03796 DnaB-like helicase C terminal domain D7A46_19415 PF00772 DnaB-like helicase N terminal domain D7A46_19420 PF01281 Ribosomal protein L9, N-terminal domain D7A46_19420 PF03948 Ribosomal protein L9, C-terminal domain D7A46_19425 PF01084 Ribosomal protein S18 D7A46_19430 PF01250 Ribosomal protein S6 D7A46_19435 PF01040 UbiA prenyltransferase family D7A46_19440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D7A46_19445 PF00510 Cytochrome c oxidase subunit III D7A46_19450 PF00115 Cytochrome C and Quinol oxidase polypeptide I D7A46_19455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D7A46_19455 PF06481 COX Aromatic Rich Motif D7A46_19465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D7A46_19465 PF02896 PEP-utilising enzyme, TIM barrel domain D7A46_19465 PF00391 PEP-utilising enzyme, mobile domain D7A46_19470 PF03618 Kinase/pyrophosphorylase D7A46_19480 PF01522 Polysaccharide deacetylase D7A46_19480 PF14883 Hypothetical glycosyl hydrolase family 13 D7A46_19485 PF00535 Glycosyl transferase family 2 D7A46_19490 PF13994 PgaD-like protein D7A46_19500 PF00296 Luciferase-like monooxygenase D7A46_19520 PF03466 LysR substrate binding domain D7A46_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D7A46_19530 PF03462 PCRF domain D7A46_19530 PF00472 RF-1 domain D7A46_19535 PF13847 Methyltransferase domain D7A46_19535 PF17827 PrmC N-terminal domain D7A46_19540 PF00528 Binding-protein-dependent transport system inner membrane component D7A46_19545 PF09084 NMT1/THI5 like D7A46_19550 PF12833 Helix-turn-helix domain D7A46_19555 PF00106 short chain dehydrogenase D7A46_19560 PF02770 Acyl-CoA dehydrogenase, middle domain D7A46_19560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D7A46_19560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D7A46_19565 PF13193 AMP-binding enzyme C-terminal domain D7A46_19565 PF00501 AMP-binding enzyme D7A46_19570 PF01613 Flavin reductase like domain D7A46_19575 PF00899 ThiF family D7A46_19580 PF03109 ABC1 family D7A46_19595 PF03814 Potassium-transporting ATPase A subunit D7A46_19605 PF02669 K+-transporting ATPase, c chain