locus-tag class description ABCAM1_0001 PF11638 DnaA N-terminal domain ABCAM1_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABCAM1_0001 PF00308 Bacterial dnaA protein ABCAM1_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABCAM1_0002 PF02767 DNA polymerase III beta subunit, central domain ABCAM1_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABCAM1_0003 PF02463 RecF/RecN/SMC N terminal domain ABCAM1_0004 PF01751 Toprim domain ABCAM1_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0004 PF18053 DNA gyrase B subunit insert domain ABCAM1_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABCAM1_0004 PF00204 DNA gyrase B ABCAM1_0006 PF09335 SNARE associated Golgi protein ABCAM1_0007 PF00005 ABC transporter ABCAM1_0007 PF12848 ABC transporter ABCAM1_0011 PF01521 Iron-sulphur cluster biosynthesis ABCAM1_0012 PF00561 alpha/beta hydrolase fold ABCAM1_0013 PF03702 Anhydro-N-acetylmuramic acid kinase ABCAM1_0014 PF00579 tRNA synthetases class I (W and Y) ABCAM1_0018 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_0019 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_0020 PF01252 Signal peptidase (SPase) II ABCAM1_0021 PF06827 Zinc finger found in FPG and IleRS ABCAM1_0021 PF08264 Anticodon-binding domain of tRNA ABCAM1_0021 PF00133 tRNA synthetases class I (I, L, M and V) ABCAM1_0022 PF01687 Riboflavin kinase ABCAM1_0022 PF06574 FAD synthetase ABCAM1_0024 PF01048 Phosphorylase superfamily ABCAM1_0025 PF08362 YcdC-like protein, C-terminal region ABCAM1_0025 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0026 PF00005 ABC transporter ABCAM1_0027 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_0028 PF00296 Luciferase-like monooxygenase ABCAM1_0029 PF09084 NMT1/THI5 like ABCAM1_0030 PF09084 NMT1/THI5 like ABCAM1_0031 PF00583 Acetyltransferase (GNAT) family ABCAM1_0031 PF00696 Amino acid kinase family ABCAM1_0034 PF00106 short chain dehydrogenase ABCAM1_0035 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_0037 PF01323 DSBA-like thioredoxin domain ABCAM1_0038 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0038 PF08360 QacR-like protein, C-terminal region ABCAM1_0039 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0041 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_0043 PF00487 Fatty acid desaturase ABCAM1_0044 PF01138 3' exoribonuclease family, domain 1 ABCAM1_0044 PF03725 3' exoribonuclease family, domain 2 ABCAM1_0048 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABCAM1_0048 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABCAM1_0049 PF01510 N-acetylmuramoyl-L-alanine amidase ABCAM1_0052 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABCAM1_0052 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_0053 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABCAM1_0053 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_0054 PF13614 AAA domain ABCAM1_0054 PF13807 G-rich domain on putative tyrosine kinase ABCAM1_0054 PF02706 Chain length determinant protein ABCAM1_0055 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABCAM1_0056 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABCAM1_0056 PF02563 Polysaccharide biosynthesis/export protein ABCAM1_0056 PF10531 SLBB domain ABCAM1_0057 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABCAM1_0057 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABCAM1_0057 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABCAM1_0059 PF02719 Polysaccharide biosynthesis protein ABCAM1_0059 PF08485 Polysaccharide biosynthesis protein C-terminal ABCAM1_0060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABCAM1_0061 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABCAM1_0067 PF00535 Glycosyl transferase family 2 ABCAM1_0069 PF02397 Bacterial sugar transferase ABCAM1_0070 PF00483 Nucleotidyl transferase ABCAM1_0071 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABCAM1_0071 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABCAM1_0071 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABCAM1_0072 PF00342 Phosphoglucose isomerase ABCAM1_0073 PF16363 GDP-mannose 4,6 dehydratase ABCAM1_0076 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABCAM1_0076 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABCAM1_0076 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABCAM1_0076 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABCAM1_0077 PF02652 L-lactate permease ABCAM1_0078 PF07729 FCD domain ABCAM1_0078 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_0079 PF01070 FMN-dependent dehydrogenase ABCAM1_0080 PF01565 FAD binding domain ABCAM1_0080 PF09330 D-lactate dehydrogenase, membrane binding ABCAM1_0081 PF00155 Aminotransferase class I and II ABCAM1_0082 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_0082 PF07729 FCD domain ABCAM1_0084 PF00285 Citrate synthase, C-terminal domain ABCAM1_0085 PF00694 Aconitase C-terminal domain ABCAM1_0085 PF00330 Aconitase family (aconitate hydratase) ABCAM1_0091 PF00849 RNA pseudouridylate synthase ABCAM1_0094 PF00593 TonB dependent receptor ABCAM1_0094 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_0096 PF01037 Lrp/AsnC ligand binding domain ABCAM1_0097 PF01266 FAD dependent oxidoreductase ABCAM1_0098 PF01168 Alanine racemase, N-terminal domain ABCAM1_0098 PF00842 Alanine racemase, C-terminal domain ABCAM1_0099 PF01042 Endoribonuclease L-PSP ABCAM1_0100 PF00324 Amino acid permease ABCAM1_0101 PF00324 Amino acid permease ABCAM1_0104 PF00665 Integrase core domain ABCAM1_0104 PF13276 HTH-like domain ABCAM1_0105 PF01527 Transposase ABCAM1_0107 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ABCAM1_0109 PF00176 SNF2 family N-terminal domain ABCAM1_0109 PF00271 Helicase conserved C-terminal domain ABCAM1_0109 PF12419 SNF2 Helicase protein ABCAM1_0110 PF07804 HipA-like C-terminal domain ABCAM1_0110 PF13657 HipA N-terminal domain ABCAM1_0112 PF02899 Phage integrase, N-terminal SAM-like domain ABCAM1_0112 PF00589 Phage integrase family ABCAM1_0115 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_0115 PF13359 DDE superfamily endonuclease ABCAM1_0116 PF13359 DDE superfamily endonuclease ABCAM1_0116 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_0119 PF00691 OmpA family ABCAM1_0119 PF01389 OmpA-like transmembrane domain ABCAM1_0122 PF02321 Outer membrane efflux protein ABCAM1_0123 PF00664 ABC transporter transmembrane region ABCAM1_0123 PF00005 ABC transporter ABCAM1_0125 PF00199 Catalase ABCAM1_0131 PF07120 Protein of unknown function (DUF1376) ABCAM1_0137 PF01722 BolA-like protein ABCAM1_0139 PF13614 AAA domain ABCAM1_0142 PF09335 SNARE associated Golgi protein ABCAM1_0147 PF04286 Protein of unknown function (DUF445) ABCAM1_0148 PF02540 NAD synthase ABCAM1_0148 PF00958 GMP synthase C terminal domain ABCAM1_0148 PF00117 Glutamine amidotransferase class-I ABCAM1_0149 PF01909 Nucleotidyltransferase domain ABCAM1_0149 PF13427 Domain of unknown function (DUF4111) ABCAM1_0150 PF03551 Transcriptional regulator PadR-like family ABCAM1_0152 PF05726 Pirin C-terminal cupin domain ABCAM1_0152 PF02678 Pirin ABCAM1_0156 PF00750 tRNA synthetases class I (R) ABCAM1_0156 PF05746 DALR anticodon binding domain ABCAM1_0156 PF03485 Arginyl tRNA synthetase N terminal domain ABCAM1_0157 PF00390 Malic enzyme, N-terminal domain ABCAM1_0157 PF03949 Malic enzyme, NAD binding domain ABCAM1_0158 PF04261 Dyp-type peroxidase family ABCAM1_0159 PF01810 LysE type translocator ABCAM1_0160 PF00950 ABC 3 transport family ABCAM1_0161 PF00005 ABC transporter ABCAM1_0165 PF00119 ATP synthase A chain ABCAM1_0166 PF00137 ATP synthase subunit C ABCAM1_0167 PF00430 ATP synthase B/B' CF(0) ABCAM1_0168 PF00213 ATP synthase delta (OSCP) subunit ABCAM1_0169 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABCAM1_0169 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCAM1_0169 PF00306 ATP synthase alpha/beta chain, C terminal domain ABCAM1_0170 PF00231 ATP synthase ABCAM1_0171 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCAM1_0171 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABCAM1_0172 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABCAM1_0174 PF00255 Glutathione peroxidase ABCAM1_0177 PF07690 Major Facilitator Superfamily ABCAM1_0178 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0179 PF00892 EamA-like transporter family ABCAM1_0180 PF01300 Telomere recombination ABCAM1_0181 PF02481 DNA recombination-mediator protein A ABCAM1_0181 PF17782 DprA winged helix domain ABCAM1_0183 PF01327 Polypeptide deformylase ABCAM1_0190 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_0192 PF03358 NADPH-dependent FMN reductase ABCAM1_0196 PF08497 Radical SAM N-terminal ABCAM1_0196 PF11842 Domain of unknown function (DUF3362) ABCAM1_0196 PF04055 Radical SAM superfamily ABCAM1_0200 PF06123 Inner membrane protein CreD ABCAM1_0201 PF00672 HAMP domain ABCAM1_0201 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_0201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0202 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_0202 PF00072 Response regulator receiver domain ABCAM1_0203 PF11798 IMS family HHH motif ABCAM1_0203 PF11799 impB/mucB/samB family C-terminal domain ABCAM1_0203 PF00817 impB/mucB/samB family ABCAM1_0207 PF03641 Possible lysine decarboxylase ABCAM1_0208 PF03471 Transporter associated domain ABCAM1_0208 PF03741 Integral membrane protein TerC family ABCAM1_0209 PF02810 SEC-C motif ABCAM1_0210 PF03458 UPF0126 domain ABCAM1_0211 PF07690 Major Facilitator Superfamily ABCAM1_0212 PF00521 DNA gyrase/topoisomerase IV, subunit A ABCAM1_0212 PF03989 DNA gyrase C-terminal domain, beta-propeller ABCAM1_0213 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_0213 PF00501 AMP-binding enzyme ABCAM1_0216 PF00719 Inorganic pyrophosphatase ABCAM1_0217 PF03573 outer membrane porin, OprD family ABCAM1_0219 PF00701 Dihydrodipicolinate synthetase family ABCAM1_0220 PF00596 Class II Aldolase and Adducin N-terminal domain ABCAM1_0221 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_0221 PF00155 Aminotransferase class I and II ABCAM1_0224 PF00543 Nitrogen regulatory protein P-II ABCAM1_0225 PF00909 Ammonium Transporter Family ABCAM1_0226 PF03477 ATP cone domain ABCAM1_0227 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABCAM1_0227 PF01872 RibD C-terminal domain ABCAM1_0229 PF00677 Lumazine binding domain ABCAM1_0233 PF02789 Cytosol aminopeptidase family, N-terminal domain ABCAM1_0233 PF00883 Cytosol aminopeptidase family, catalytic domain ABCAM1_0235 PF03739 Lipopolysaccharide export system permease LptF/LptG ABCAM1_0236 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABCAM1_0236 PF01676 Metalloenzyme superfamily ABCAM1_0237 PF00595 PDZ domain ABCAM1_0237 PF03572 Peptidase family S41 ABCAM1_0238 PF02954 Bacterial regulatory protein, Fis family ABCAM1_0238 PF00072 Response regulator receiver domain ABCAM1_0238 PF00158 Sigma-54 interaction domain ABCAM1_0239 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_0239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0240 PF00196 Bacterial regulatory proteins, luxR family ABCAM1_0240 PF00072 Response regulator receiver domain ABCAM1_0241 PF00768 D-alanyl-D-alanine carboxypeptidase ABCAM1_0242 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_0243 PF01842 ACT domain ABCAM1_0243 PF00742 Homoserine dehydrogenase ABCAM1_0243 PF03447 Homoserine dehydrogenase, NAD binding domain ABCAM1_0244 PF13098 Thioredoxin-like domain ABCAM1_0244 PF10411 Disulfide bond isomerase protein N-terminus ABCAM1_0245 PF02899 Phage integrase, N-terminal SAM-like domain ABCAM1_0245 PF00589 Phage integrase family ABCAM1_0247 PF07670 Nucleoside recognition ABCAM1_0247 PF07664 Ferrous iron transport protein B C terminus ABCAM1_0247 PF02421 Ferrous iron transport protein B ABCAM1_0249 PF08245 Mur ligase middle domain ABCAM1_0249 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_0250 PF01098 Cell cycle protein ABCAM1_0251 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCAM1_0252 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABCAM1_0253 PF00149 Calcineurin-like phosphoesterase ABCAM1_0254 PF00293 NUDIX domain ABCAM1_0255 PF13667 ThiC-associated domain ABCAM1_0255 PF01964 Radical SAM ThiC family ABCAM1_0259 PF00892 EamA-like transporter family ABCAM1_0260 PF02321 Outer membrane efflux protein ABCAM1_0261 PF01895 PhoU domain ABCAM1_0262 PF04362 Bacterial Fe(2+) trafficking ABCAM1_0263 PF00206 Lyase ABCAM1_0263 PF14698 Argininosuccinate lyase C-terminal ABCAM1_0264 PF06580 Histidine kinase ABCAM1_0264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0264 PF07694 5TMR of 5TMR-LYT ABCAM1_0265 PF00072 Response regulator receiver domain ABCAM1_0265 PF04397 LytTr DNA-binding domain ABCAM1_0266 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABCAM1_0266 PF03900 Porphobilinogen deaminase, C-terminal domain ABCAM1_0271 PF00816 H-NS histone family ABCAM1_0274 PF03958 Bacterial type II/III secretion system short domain ABCAM1_0274 PF00263 Bacterial type II and III secretion system protein ABCAM1_0275 PF00498 FHA domain ABCAM1_0275 PF12401 Protein of unknown function (DUF2662) ABCAM1_0276 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_0279 PF03144 Elongation factor Tu domain 2 ABCAM1_0279 PF03143 Elongation factor Tu C-terminal domain ABCAM1_0279 PF00009 Elongation factor Tu GTP binding domain ABCAM1_0280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABCAM1_0281 PF00467 KOW motif ABCAM1_0281 PF02357 Transcription termination factor nusG ABCAM1_0282 PF03946 Ribosomal protein L11, N-terminal domain ABCAM1_0282 PF00298 Ribosomal protein L11, RNA binding domain ABCAM1_0283 PF00687 Ribosomal protein L1p/L10e family ABCAM1_0284 PF00466 Ribosomal protein L10 ABCAM1_0285 PF00542 Ribosomal protein L7/L12 C-terminal domain ABCAM1_0285 PF16320 Ribosomal protein L7/L12 dimerisation domain ABCAM1_0286 PF04563 RNA polymerase beta subunit ABCAM1_0286 PF04561 RNA polymerase Rpb2, domain 2 ABCAM1_0286 PF04565 RNA polymerase Rpb2, domain 3 ABCAM1_0286 PF10385 RNA polymerase beta subunit external 1 domain ABCAM1_0286 PF04560 RNA polymerase Rpb2, domain 7 ABCAM1_0286 PF00562 RNA polymerase Rpb2, domain 6 ABCAM1_0287 PF04997 RNA polymerase Rpb1, domain 1 ABCAM1_0287 PF04983 RNA polymerase Rpb1, domain 3 ABCAM1_0287 PF05000 RNA polymerase Rpb1, domain 4 ABCAM1_0287 PF04998 RNA polymerase Rpb1, domain 5 ABCAM1_0287 PF00623 RNA polymerase Rpb1, domain 2 ABCAM1_0291 PF00561 alpha/beta hydrolase fold ABCAM1_0292 PF13726 Na+-H+ antiporter family ABCAM1_0292 PF03553 Na+/H+ antiporter family ABCAM1_0295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0295 PF00183 Hsp90 protein ABCAM1_0298 PF01323 DSBA-like thioredoxin domain ABCAM1_0301 PF00376 MerR family regulatory protein ABCAM1_0301 PF09278 MerR, DNA binding ABCAM1_0306 PF13359 DDE superfamily endonuclease ABCAM1_0306 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_0307 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_0307 PF13359 DDE superfamily endonuclease ABCAM1_0309 PF02803 Thiolase, C-terminal domain ABCAM1_0309 PF00108 Thiolase, N-terminal domain ABCAM1_0310 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_0310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCAM1_0310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCAM1_0313 PF01541 GIY-YIG catalytic domain ABCAM1_0313 PF02151 UvrB/uvrC motif ABCAM1_0313 PF08459 UvrC Helix-hairpin-helix N-terminal ABCAM1_0315 PF00872 Transposase, Mutator family ABCAM1_0317 PF01066 CDP-alcohol phosphatidyltransferase ABCAM1_0318 PF02805 Metal binding domain of Ada ABCAM1_0318 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABCAM1_0318 PF12833 Helix-turn-helix domain ABCAM1_0318 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABCAM1_0324 PF13533 Biotin-lipoyl like ABCAM1_0325 PF03652 Holliday junction resolvase ABCAM1_0326 PF02622 Uncharacterized ACR, COG1678 ABCAM1_0327 PF02463 RecF/RecN/SMC N terminal domain ABCAM1_0329 PF06865 Pyrimidine/purine nucleoside phosphorylase ABCAM1_0330 PF00588 SpoU rRNA Methylase family ABCAM1_0330 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABCAM1_0332 PF01121 Dephospho-CoA kinase ABCAM1_0333 PF06750 Bacterial Peptidase A24 N-terminal domain ABCAM1_0333 PF01478 Type IV leader peptidase family ABCAM1_0334 PF00482 Type II secretion system (T2SS), protein F ABCAM1_0335 PF00437 Type II/IV secretion system protein ABCAM1_0335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABCAM1_0336 PF00121 Triosephosphate isomerase ABCAM1_0337 PF03840 Preprotein translocase SecG subunit ABCAM1_0338 PF17384 RimP C-terminal SH3 domain ABCAM1_0338 PF02576 RimP N-terminal domain ABCAM1_0339 PF08529 NusA N-terminal domain ABCAM1_0339 PF00575 S1 RNA binding domain ABCAM1_0339 PF13184 NusA-like KH domain ABCAM1_0340 PF04760 Translation initiation factor IF-2, N-terminal region ABCAM1_0340 PF08364 Bacterial translation initiation factor IF-2 associated region ABCAM1_0340 PF00009 Elongation factor Tu GTP binding domain ABCAM1_0340 PF11987 Translation-initiation factor 2 ABCAM1_0341 PF02033 Ribosome-binding factor A ABCAM1_0343 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABCAM1_0346 PF00361 Proton-conducting membrane transporter ABCAM1_0347 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABCAM1_0348 PF13244 Domain of unknown function (DUF4040) ABCAM1_0348 PF00361 Proton-conducting membrane transporter ABCAM1_0348 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABCAM1_0348 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABCAM1_0351 PF01502 Phosphoribosyl-AMP cyclohydrolase ABCAM1_0352 PF01494 FAD binding domain ABCAM1_0353 PF03109 ABC1 family ABCAM1_0355 PF01209 ubiE/COQ5 methyltransferase family ABCAM1_0357 PF03976 Polyphosphate kinase 2 (PPK2) ABCAM1_0359 PF17946 RecC C-terminal domain ABCAM1_0360 PF00580 UvrD/REP helicase N-terminal domain ABCAM1_0360 PF12705 PD-(D/E)XK nuclease superfamily ABCAM1_0360 PF13361 UvrD-like helicase C-terminal domain ABCAM1_0361 PF13538 UvrD-like helicase C-terminal domain ABCAM1_0363 PF00312 Ribosomal protein S15 ABCAM1_0364 PF03725 3' exoribonuclease family, domain 2 ABCAM1_0364 PF01138 3' exoribonuclease family, domain 1 ABCAM1_0364 PF00013 KH domain ABCAM1_0364 PF00575 S1 RNA binding domain ABCAM1_0364 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABCAM1_0365 PF01544 CorA-like Mg2+ transporter protein ABCAM1_0367 PF01556 DnaJ C terminal domain ABCAM1_0367 PF00226 DnaJ domain ABCAM1_0369 PF01430 Hsp33 protein ABCAM1_0370 PF00999 Sodium/hydrogen exchanger family ABCAM1_0370 PF02254 TrkA-N domain ABCAM1_0371 PF00270 DEAD/DEAH box helicase ABCAM1_0371 PF00271 Helicase conserved C-terminal domain ABCAM1_0371 PF17764 3′ DNA-binding domain (3′BD) ABCAM1_0371 PF18074 Primosomal protein N C-terminal domain ABCAM1_0371 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABCAM1_0372 PF00482 Type II secretion system (T2SS), protein F ABCAM1_0373 PF08334 Type II secretion system (T2SS), protein G ABCAM1_0373 PF07963 Prokaryotic N-terminal methylation motif ABCAM1_0375 PF01588 Putative tRNA binding domain ABCAM1_0378 PF00795 Carbon-nitrogen hydrolase ABCAM1_0379 PF03471 Transporter associated domain ABCAM1_0379 PF00571 CBS domain ABCAM1_0380 PF01206 Sulfurtransferase TusA ABCAM1_0383 PF01177 Asp/Glu/Hydantoin racemase ABCAM1_0385 PF00762 Ferrochelatase ABCAM1_0386 PF00753 Metallo-beta-lactamase superfamily ABCAM1_0387 PF03884 DNA gyrase inhibitor YacG ABCAM1_0391 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABCAM1_0393 PF13007 Transposase C of IS166 homeodomain ABCAM1_0393 PF13817 IS66 C-terminal element ABCAM1_0393 PF03050 Transposase IS66 family ABCAM1_0393 PF13005 zinc-finger binding domain of transposase IS66 ABCAM1_0396 PF01197 Ribosomal protein L31 ABCAM1_0397 PF03109 ABC1 family ABCAM1_0398 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_0398 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_0399 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_0399 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_0399 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_0400 PF01554 MatE ABCAM1_0402 PF04055 Radical SAM superfamily ABCAM1_0402 PF06969 HemN C-terminal domain ABCAM1_0404 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_0404 PF00501 AMP-binding enzyme ABCAM1_0405 PF00575 S1 RNA binding domain ABCAM1_0405 PF10150 Ribonuclease E/G family ABCAM1_0405 PF12111 Polyribonucleotide phosphorylase C terminal ABCAM1_0406 PF01479 S4 domain ABCAM1_0406 PF00849 RNA pseudouridylate synthase ABCAM1_0407 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_0408 PF08279 HTH domain ABCAM1_0408 PF13280 WYL domain ABCAM1_0409 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_0411 PF03466 LysR substrate binding domain ABCAM1_0411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0412 PF12706 Beta-lactamase superfamily domain ABCAM1_0413 PF00141 Peroxidase ABCAM1_0414 PF00391 PEP-utilising enzyme, mobile domain ABCAM1_0414 PF05524 PEP-utilising enzyme, N-terminal ABCAM1_0414 PF01590 GAF domain ABCAM1_0414 PF02896 PEP-utilising enzyme, TIM barrel domain ABCAM1_0415 PF00293 NUDIX domain ABCAM1_0417 PF03466 LysR substrate binding domain ABCAM1_0417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0419 PF00330 Aconitase family (aconitate hydratase) ABCAM1_0420 PF00694 Aconitase C-terminal domain ABCAM1_0422 PF00180 Isocitrate/isopropylmalate dehydrogenase ABCAM1_0425 PF01176 Translation initiation factor 1A / IF-1 ABCAM1_0427 PF01416 tRNA pseudouridine synthase ABCAM1_0431 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABCAM1_0431 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABCAM1_0433 PF00375 Sodium:dicarboxylate symporter family ABCAM1_0435 PF03279 Bacterial lipid A biosynthesis acyltransferase ABCAM1_0436 PF01810 LysE type translocator ABCAM1_0440 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_0440 PF00107 Zinc-binding dehydrogenase ABCAM1_0441 PF01638 HxlR-like helix-turn-helix ABCAM1_0443 PF01131 DNA topoisomerase ABCAM1_0443 PF01396 Topoisomerase DNA binding C4 zinc finger ABCAM1_0443 PF01751 Toprim domain ABCAM1_0443 PF08272 Topoisomerase I zinc-ribbon-like ABCAM1_0446 PF13361 UvrD-like helicase C-terminal domain ABCAM1_0446 PF00580 UvrD/REP helicase N-terminal domain ABCAM1_0447 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABCAM1_0451 PF00999 Sodium/hydrogen exchanger family ABCAM1_0451 PF02254 TrkA-N domain ABCAM1_0452 PF00471 Ribosomal protein L33 ABCAM1_0453 PF00830 Ribosomal L28 family ABCAM1_0454 PF00171 Aldehyde dehydrogenase family ABCAM1_0456 PF00551 Formyl transferase ABCAM1_0456 PF01842 ACT domain ABCAM1_0460 PF01618 MotA/TolQ/ExbB proton channel family ABCAM1_0462 PF01625 Peptide methionine sulfoxide reductase ABCAM1_0464 PF00186 Dihydrofolate reductase ABCAM1_0465 PF00303 Thymidylate synthase ABCAM1_0468 PF01790 Prolipoprotein diacylglyceryl transferase ABCAM1_0472 PF00902 Sec-independent protein translocase protein (TatC) ABCAM1_0473 PF02416 mttA/Hcf106 family ABCAM1_0474 PF02416 mttA/Hcf106 family ABCAM1_0476 PF01725 Ham1 family ABCAM1_0478 PF00561 alpha/beta hydrolase fold ABCAM1_0478 PF07021 Methionine biosynthesis protein MetW ABCAM1_0479 PF00561 alpha/beta hydrolase fold ABCAM1_0480 PF08502 LeuA allosteric (dimerisation) domain ABCAM1_0480 PF00682 HMGL-like ABCAM1_0481 PF18331 PKHD-type hydroxylase C-terminal domain ABCAM1_0481 PF13640 2OG-Fe(II) oxygenase superfamily ABCAM1_0484 PF05697 Bacterial trigger factor protein (TF) ABCAM1_0484 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_0484 PF05698 Bacterial trigger factor protein (TF) C-terminus ABCAM1_0485 PF00574 Clp protease ABCAM1_0486 PF07724 AAA domain (Cdc48 subfamily) ABCAM1_0486 PF10431 C-terminal, D2-small domain, of ClpB protein ABCAM1_0486 PF06689 ClpX C4-type zinc finger ABCAM1_0489 PF05681 Fumarate hydratase (Fumerase) ABCAM1_0489 PF05683 Fumarase C-terminus ABCAM1_0490 PF07085 DRTGG domain ABCAM1_0490 PF01515 Phosphate acetyl/butaryl transferase ABCAM1_0491 PF00871 Acetokinase family ABCAM1_0492 PF00920 Dehydratase family ABCAM1_0493 PF01081 KDPG and KHG aldolase ABCAM1_0494 PF02447 GntP family permease ABCAM1_0495 PF01202 Shikimate kinase ABCAM1_0496 PF00171 Aldehyde dehydrogenase family ABCAM1_0497 PF00171 Aldehyde dehydrogenase family ABCAM1_0498 PF00561 alpha/beta hydrolase fold ABCAM1_0502 PF11818 C-terminal domain of tail specific protease (DUF3340) ABCAM1_0502 PF17804 Tail specific protease N-terminal domain ABCAM1_0502 PF00595 PDZ domain ABCAM1_0502 PF03572 Peptidase family S41 ABCAM1_0503 PF13439 Glycosyltransferase Family 4 ABCAM1_0503 PF00534 Glycosyl transferases group 1 ABCAM1_0504 PF01569 PAP2 superfamily ABCAM1_0505 PF04384 Iron-sulphur cluster assembly ABCAM1_0506 PF00334 Nucleoside diphosphate kinase ABCAM1_0507 PF04055 Radical SAM superfamily ABCAM1_0509 PF13464 Domain of unknown function (DUF4115) ABCAM1_0510 PF04551 GcpE protein ABCAM1_0511 PF03129 Anticodon binding domain ABCAM1_0511 PF13393 Histidyl-tRNA synthetase ABCAM1_0513 PF13360 PQQ-like domain ABCAM1_0514 PF01926 50S ribosome-binding GTPase ABCAM1_0514 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABCAM1_0516 PF02556 Preprotein translocase subunit SecB ABCAM1_0517 PF00462 Glutaredoxin ABCAM1_0519 PF03193 RsgA GTPase ABCAM1_0520 PF00929 Exonuclease ABCAM1_0523 PF02321 Outer membrane efflux protein ABCAM1_0524 PF02687 FtsX-like permease family ABCAM1_0524 PF00005 ABC transporter ABCAM1_0524 PF12704 MacB-like periplasmic core domain ABCAM1_0525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_0528 PF08264 Anticodon-binding domain of tRNA ABCAM1_0528 PF13603 Leucyl-tRNA synthetase, Domain 2 ABCAM1_0528 PF09334 tRNA synthetases class I (M) ABCAM1_0528 PF00133 tRNA synthetases class I (I, L, M and V) ABCAM1_0530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABCAM1_0530 PF00205 Thiamine pyrophosphate enzyme, central domain ABCAM1_0530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABCAM1_0531 PF10369 Small subunit of acetolactate synthase ABCAM1_0532 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABCAM1_0532 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABCAM1_0533 PF03707 Bacterial signalling protein N terminal repeat ABCAM1_0533 PF00563 EAL domain ABCAM1_0533 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_0537 PF16658 Class II release factor RF3, C-terminal domain ABCAM1_0537 PF00009 Elongation factor Tu GTP binding domain ABCAM1_0537 PF03144 Elongation factor Tu domain 2 ABCAM1_0540 PF01026 TatD related DNase ABCAM1_0541 PF00330 Aconitase family (aconitate hydratase) ABCAM1_0541 PF00694 Aconitase C-terminal domain ABCAM1_0542 PF00899 ThiF family ABCAM1_0543 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0543 PF03466 LysR substrate binding domain ABCAM1_0545 PF01207 Dihydrouridine synthase (Dus) ABCAM1_0546 PF07690 Major Facilitator Superfamily ABCAM1_0548 PF00892 EamA-like transporter family ABCAM1_0549 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABCAM1_0549 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABCAM1_0551 PF02233 NAD(P) transhydrogenase beta subunit ABCAM1_0552 PF00106 short chain dehydrogenase ABCAM1_0554 PF01261 Xylose isomerase-like TIM barrel ABCAM1_0555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCAM1_0555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCAM1_0556 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_0557 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_0557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0557 PF00072 Response regulator receiver domain ABCAM1_0557 PF01627 Hpt domain ABCAM1_0557 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABCAM1_0557 PF00672 HAMP domain ABCAM1_0558 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_0562 PF13291 ACT domain ABCAM1_0562 PF02824 TGS domain ABCAM1_0562 PF04607 Region found in RelA / SpoT proteins ABCAM1_0564 PF03819 MazG nucleotide pyrophosphohydrolase domain ABCAM1_0566 PF01743 Poly A polymerase head domain ABCAM1_0566 PF12626 Polymerase A arginine-rich C-terminus ABCAM1_0566 PF12627 Probable RNA and SrmB- binding site of polymerase A ABCAM1_0567 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABCAM1_0568 PF02548 Ketopantoate hydroxymethyltransferase ABCAM1_0569 PF02569 Pantoate-beta-alanine ligase ABCAM1_0570 PF03668 P-loop ATPase protein family ABCAM1_0571 PF00381 PTS HPr component phosphorylation site ABCAM1_0572 PF04751 Protein of unknown function (DUF615) ABCAM1_0573 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_0573 PF00501 AMP-binding enzyme ABCAM1_0574 PF03129 Anticodon binding domain ABCAM1_0574 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABCAM1_0574 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCAM1_0574 PF02824 TGS domain ABCAM1_0575 PF00707 Translation initiation factor IF-3, C-terminal domain ABCAM1_0575 PF05198 Translation initiation factor IF-3, N-terminal domain ABCAM1_0576 PF00043 Glutathione S-transferase, C-terminal domain ABCAM1_0576 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_0577 PF09335 SNARE associated Golgi protein ABCAM1_0578 PF07690 Major Facilitator Superfamily ABCAM1_0579 PF01632 Ribosomal protein L35 ABCAM1_0580 PF00453 Ribosomal protein L20 ABCAM1_0584 PF01409 tRNA synthetases class II core domain (F) ABCAM1_0584 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABCAM1_0585 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABCAM1_0585 PF01588 Putative tRNA binding domain ABCAM1_0585 PF03147 Ferredoxin-fold anticodon binding domain ABCAM1_0585 PF03484 tRNA synthetase B5 domain ABCAM1_0585 PF03483 B3/4 domain ABCAM1_0586 PF00216 Bacterial DNA-binding protein ABCAM1_0588 PF07497 Rho termination factor, RNA-binding domain ABCAM1_0588 PF07498 Rho termination factor, N-terminal domain ABCAM1_0588 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCAM1_0589 PF00085 Thioredoxin ABCAM1_0590 PF02541 Ppx/GppA phosphatase family ABCAM1_0591 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABCAM1_0592 PF11734 TilS substrate C-terminal domain ABCAM1_0592 PF09179 TilS substrate binding domain ABCAM1_0592 PF01171 PP-loop family ABCAM1_0593 PF03807 NADP oxidoreductase coenzyme F420-dependent ABCAM1_0593 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABCAM1_0594 PF02325 YGGT family ABCAM1_0595 PF01367 5'-3' exonuclease, C-terminal SAM fold ABCAM1_0595 PF01612 3'-5' exonuclease ABCAM1_0595 PF00476 DNA polymerase family A ABCAM1_0595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABCAM1_0600 PF00437 Type II/IV secretion system protein ABCAM1_0601 PF02566 OsmC-like protein ABCAM1_0602 PF01047 MarR family ABCAM1_0604 PF00795 Carbon-nitrogen hydrolase ABCAM1_0610 PF04963 Sigma-54 factor, core binding domain ABCAM1_0610 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABCAM1_0610 PF04552 Sigma-54, DNA binding domain ABCAM1_0611 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABCAM1_0612 PF01722 BolA-like protein ABCAM1_0613 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABCAM1_0614 PF01634 ATP phosphoribosyltransferase ABCAM1_0615 PF00815 Histidinol dehydrogenase ABCAM1_0616 PF00155 Aminotransferase class I and II ABCAM1_0617 PF00425 chorismate binding enzyme ABCAM1_0617 PF04715 Anthranilate synthase component I, N terminal region ABCAM1_0620 PF00293 NUDIX domain ABCAM1_0621 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_0622 PF00814 Glycoprotease family ABCAM1_0623 PF04445 Putative SAM-dependent methyltransferase ABCAM1_0628 PF00834 Ribulose-phosphate 3 epimerase family ABCAM1_0631 PF07731 Multicopper oxidase ABCAM1_0631 PF07732 Multicopper oxidase ABCAM1_0631 PF00394 Multicopper oxidase ABCAM1_0634 PF00893 Small Multidrug Resistance protein ABCAM1_0635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABCAM1_0635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABCAM1_0636 PF01960 ArgJ family ABCAM1_0637 PF02445 Quinolinate synthetase A protein ABCAM1_0638 PF00962 Adenosine/AMP deaminase ABCAM1_0639 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_0639 PF00107 Zinc-binding dehydrogenase ABCAM1_0640 PF03466 LysR substrate binding domain ABCAM1_0640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0641 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_0641 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_0641 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_0642 PF07690 Major Facilitator Superfamily ABCAM1_0643 PF02515 CoA-transferase family III ABCAM1_0644 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0644 PF17932 Tetracyclin repressor-like, C-terminal domain ABCAM1_0648 PF00890 FAD binding domain ABCAM1_0648 PF14537 Cytochrome c3 ABCAM1_0649 PF03466 LysR substrate binding domain ABCAM1_0649 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0651 PF07690 Major Facilitator Superfamily ABCAM1_0652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0652 PF03466 LysR substrate binding domain ABCAM1_0653 PF01810 LysE type translocator ABCAM1_0654 PF03466 LysR substrate binding domain ABCAM1_0654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0656 PF08267 Cobalamin-independent synthase, N-terminal domain ABCAM1_0656 PF01717 Cobalamin-independent synthase, Catalytic domain ABCAM1_0657 PF01613 Flavin reductase like domain ABCAM1_0661 PF17074 Darcynin, domain of unknown function ABCAM1_0671 PF00665 Integrase core domain ABCAM1_0671 PF13333 Integrase core domain ABCAM1_0671 PF13276 HTH-like domain ABCAM1_0678 PF00665 Integrase core domain ABCAM1_0678 PF13936 Helix-turn-helix domain ABCAM1_0680 PF14864 Alkyl sulfatase C-terminal ABCAM1_0680 PF14863 Alkyl sulfatase dimerisation ABCAM1_0680 PF00753 Metallo-beta-lactamase superfamily ABCAM1_0681 PF00268 Ribonucleotide reductase, small chain ABCAM1_0683 PF03477 ATP cone domain ABCAM1_0683 PF02867 Ribonucleotide reductase, barrel domain ABCAM1_0683 PF00317 Ribonucleotide reductase, all-alpha domain ABCAM1_0684 PF00072 Response regulator receiver domain ABCAM1_0684 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_0685 PF00672 HAMP domain ABCAM1_0685 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_0685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_0689 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABCAM1_0690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABCAM1_0691 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABCAM1_0691 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABCAM1_0693 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABCAM1_0693 PF10531 SLBB domain ABCAM1_0693 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABCAM1_0694 PF00384 Molybdopterin oxidoreductase ABCAM1_0694 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABCAM1_0694 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCAM1_0695 PF00146 NADH dehydrogenase ABCAM1_0696 PF12838 4Fe-4S dicluster domain ABCAM1_0697 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABCAM1_0698 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABCAM1_0699 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABCAM1_0699 PF00361 Proton-conducting membrane transporter ABCAM1_0700 PF00361 Proton-conducting membrane transporter ABCAM1_0701 PF00361 Proton-conducting membrane transporter ABCAM1_0703 PF00313 'Cold-shock' DNA-binding domain ABCAM1_0704 PF03466 LysR substrate binding domain ABCAM1_0704 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0705 PF00970 Oxidoreductase FAD-binding domain ABCAM1_0705 PF00175 Oxidoreductase NAD-binding domain ABCAM1_0708 PF05552 Conserved TM helix ABCAM1_0711 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_0712 PF13533 Biotin-lipoyl like ABCAM1_0717 PF01588 Putative tRNA binding domain ABCAM1_0717 PF09334 tRNA synthetases class I (M) ABCAM1_0719 PF10609 NUBPL iron-transfer P-loop NTPase ABCAM1_0720 PF01048 Phosphorylase superfamily ABCAM1_0723 PF00692 dUTPase ABCAM1_0731 PF01207 Dihydrouridine synthase (Dus) ABCAM1_0733 PF02881 SRP54-type protein, helical bundle domain ABCAM1_0733 PF02978 Signal peptide binding domain ABCAM1_0733 PF00448 SRP54-type protein, GTPase domain ABCAM1_0734 PF03309 Type III pantothenate kinase ABCAM1_0736 PF01925 Sulfite exporter TauE/SafE ABCAM1_0738 PF06470 SMC proteins Flexible Hinge Domain ABCAM1_0738 PF02463 RecF/RecN/SMC N terminal domain ABCAM1_0740 PF12826 Helix-hairpin-helix motif ABCAM1_0740 PF03120 NAD-dependent DNA ligase OB-fold domain ABCAM1_0740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABCAM1_0740 PF01653 NAD-dependent DNA ligase adenylation domain ABCAM1_0740 PF00533 BRCA1 C Terminus (BRCT) domain ABCAM1_0741 PF00210 Ferritin-like domain ABCAM1_0742 PF07690 Major Facilitator Superfamily ABCAM1_0743 PF00982 Glycosyltransferase family 20 ABCAM1_0744 PF02358 Trehalose-phosphatase ABCAM1_0745 PF12697 Alpha/beta hydrolase family ABCAM1_0745 PF08241 Methyltransferase domain ABCAM1_0746 PF04055 Radical SAM superfamily ABCAM1_0746 PF00202 Aminotransferase class-III ABCAM1_0746 PF06968 Biotin and Thiamin Synthesis associated domain ABCAM1_0747 PF00155 Aminotransferase class I and II ABCAM1_0750 PF00665 Integrase core domain ABCAM1_0750 PF13276 HTH-like domain ABCAM1_0750 PF13333 Integrase core domain ABCAM1_0752 PF00849 RNA pseudouridylate synthase ABCAM1_0752 PF01479 S4 domain ABCAM1_0753 PF04079 Segregation and condensation complex subunit ScpB ABCAM1_0754 PF02616 Segregation and condensation protein ScpA ABCAM1_0755 PF01300 Telomere recombination ABCAM1_0756 PF04315 Elongation factor P hydroxylase ABCAM1_0757 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABCAM1_0758 PF01783 Ribosomal L32p protein family ABCAM1_0759 PF00698 Acyl transferase domain ABCAM1_0761 PF00550 Phosphopantetheine attachment site ABCAM1_0762 PF04972 BON domain ABCAM1_0762 PF01476 LysM domain ABCAM1_0763 PF03070 TENA/THI-4/PQQC family ABCAM1_0763 PF08543 Phosphomethylpyrimidine kinase ABCAM1_0763 PF02581 Thiamine monophosphate synthase ABCAM1_0765 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABCAM1_0768 PF02261 Aspartate decarboxylase ABCAM1_0769 PF01195 Peptidyl-tRNA hydrolase ABCAM1_0770 PF01386 Ribosomal L25p family ABCAM1_0771 PF14572 Phosphoribosyl synthetase-associated domain ABCAM1_0771 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABCAM1_0773 PF03550 Outer membrane lipoprotein LolB ABCAM1_0775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABCAM1_0775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABCAM1_0775 PF01488 Shikimate / quinate 5-dehydrogenase ABCAM1_0776 PF10410 DnaB-helicase binding domain of primase ABCAM1_0776 PF08278 DNA primase DnaG DnaB-binding ABCAM1_0776 PF01807 CHC2 zinc finger ABCAM1_0776 PF08275 DNA primase catalytic core, N-terminal domain ABCAM1_0777 PF13525 Outer membrane lipoprotein ABCAM1_0778 PF01479 S4 domain ABCAM1_0778 PF00849 RNA pseudouridylate synthase ABCAM1_0780 PF03358 NADPH-dependent FMN reductase ABCAM1_0781 PF01668 SmpB protein ABCAM1_0782 PF01467 Cytidylyltransferase-like ABCAM1_0783 PF00037 4Fe-4S binding domain ABCAM1_0785 PF03466 LysR substrate binding domain ABCAM1_0785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0786 PF00180 Isocitrate/isopropylmalate dehydrogenase ABCAM1_0787 PF02028 BCCT, betaine/carnitine/choline family transporter ABCAM1_0788 PF07859 alpha/beta hydrolase fold ABCAM1_0789 PF00355 Rieske [2Fe-2S] domain ABCAM1_0789 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABCAM1_0790 PF00171 Aldehyde dehydrogenase family ABCAM1_0791 PF00175 Oxidoreductase NAD-binding domain ABCAM1_0791 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_0791 PF00970 Oxidoreductase FAD-binding domain ABCAM1_0793 PF02540 NAD synthase ABCAM1_0793 PF00795 Carbon-nitrogen hydrolase ABCAM1_0795 PF05726 Pirin C-terminal cupin domain ABCAM1_0795 PF02678 Pirin ABCAM1_0797 PF02801 Beta-ketoacyl synthase, C-terminal domain ABCAM1_0797 PF00109 Beta-ketoacyl synthase, N-terminal domain ABCAM1_0799 PF00164 Ribosomal protein S12/S23 ABCAM1_0800 PF00177 Ribosomal protein S7p/S5e ABCAM1_0801 PF14492 Elongation Factor G, domain II ABCAM1_0801 PF00009 Elongation factor Tu GTP binding domain ABCAM1_0801 PF03764 Elongation factor G, domain IV ABCAM1_0801 PF03144 Elongation factor Tu domain 2 ABCAM1_0801 PF00679 Elongation factor G C-terminus ABCAM1_0802 PF03143 Elongation factor Tu C-terminal domain ABCAM1_0802 PF00009 Elongation factor Tu GTP binding domain ABCAM1_0802 PF03144 Elongation factor Tu domain 2 ABCAM1_0805 PF00583 Acetyltransferase (GNAT) family ABCAM1_0806 PF04377 Arginine-tRNA-protein transferase, C terminus ABCAM1_0806 PF04376 Arginine-tRNA-protein transferase, N terminus ABCAM1_0807 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABCAM1_0808 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_0809 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABCAM1_0809 PF17854 FtsK alpha domain ABCAM1_0809 PF09397 Ftsk gamma domain ABCAM1_0809 PF01580 FtsK/SpoIIIE family ABCAM1_0810 PF01810 LysE type translocator ABCAM1_0812 PF03776 Septum formation topological specificity factor MinE ABCAM1_0813 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABCAM1_0814 PF03775 Septum formation inhibitor MinC, C-terminal domain ABCAM1_0816 PF01553 Acyltransferase ABCAM1_0817 PF00691 OmpA family ABCAM1_0817 PF13488 Glycine zipper ABCAM1_0818 PF00580 UvrD/REP helicase N-terminal domain ABCAM1_0818 PF13361 UvrD-like helicase C-terminal domain ABCAM1_0819 PF00692 dUTPase ABCAM1_0822 PF00696 Amino acid kinase family ABCAM1_0824 PF13230 Glutamine amidotransferases class-II ABCAM1_0825 PF01814 Hemerythrin HHE cation binding domain ABCAM1_0827 PF03658 RnfH family Ubiquitin ABCAM1_0828 PF04355 SmpA / OmlA family ABCAM1_0829 PF01475 Ferric uptake regulator family ABCAM1_0830 PF00437 Type II/IV secretion system protein ABCAM1_0831 PF00437 Type II/IV secretion system protein ABCAM1_0832 PF01168 Alanine racemase, N-terminal domain ABCAM1_0834 PF00149 Calcineurin-like phosphoesterase ABCAM1_0834 PF12320 Type 5 capsule protein repressor C-terminal domain ABCAM1_0838 PF01370 NAD dependent epimerase/dehydratase family ABCAM1_0838 PF08338 Domain of unknown function (DUF1731) ABCAM1_0839 PF01266 FAD dependent oxidoreductase ABCAM1_0840 PF00490 Delta-aminolevulinic acid dehydratase ABCAM1_0841 PF03061 Thioesterase superfamily ABCAM1_0842 PF13533 Biotin-lipoyl like ABCAM1_0843 PF07690 Major Facilitator Superfamily ABCAM1_0845 PF00589 Phage integrase family ABCAM1_0845 PF13356 Arm DNA-binding domain ABCAM1_0857 PF09669 Phage regulatory protein Rha (Phage_pRha) ABCAM1_0857 PF10549 ORF11CD3 domain ABCAM1_0892 PF00589 Phage integrase family ABCAM1_0892 PF13356 Arm DNA-binding domain ABCAM1_0906 PF00436 Single-strand binding protein family ABCAM1_0908 PF13333 Integrase core domain ABCAM1_0908 PF13276 HTH-like domain ABCAM1_0908 PF00665 Integrase core domain ABCAM1_0909 PF01527 Transposase ABCAM1_0919 PF13737 Transposase DDE domain ABCAM1_0924 PF00083 Sugar (and other) transporter ABCAM1_0925 PF00701 Dihydrodipicolinate synthetase family ABCAM1_0931 PF13520 Amino acid permease ABCAM1_0932 PF02574 Homocysteine S-methyltransferase ABCAM1_0934 PF06039 Malate:quinone oxidoreductase (Mqo) ABCAM1_0935 PF05199 GMC oxidoreductase ABCAM1_0935 PF00732 GMC oxidoreductase ABCAM1_0936 PF00171 Aldehyde dehydrogenase family ABCAM1_0937 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_0937 PF13977 BetI-type transcriptional repressor, C-terminal ABCAM1_0938 PF02028 BCCT, betaine/carnitine/choline family transporter ABCAM1_0939 PF02028 BCCT, betaine/carnitine/choline family transporter ABCAM1_0941 PF03061 Thioesterase superfamily ABCAM1_0943 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABCAM1_0943 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABCAM1_0944 PF00375 Sodium:dicarboxylate symporter family ABCAM1_0945 PF07152 YaeQ protein ABCAM1_0946 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_0947 PF14883 Hypothetical glycosyl hydrolase family 13 ABCAM1_0947 PF01522 Polysaccharide deacetylase ABCAM1_0948 PF00535 Glycosyl transferase family 2 ABCAM1_0954 PF01614 Bacterial transcriptional regulator ABCAM1_0954 PF09339 IclR helix-turn-helix domain ABCAM1_0955 PF00355 Rieske [2Fe-2S] domain ABCAM1_0957 PF00355 Rieske [2Fe-2S] domain ABCAM1_0959 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCAM1_0960 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_0960 PF14759 Reductase C-terminal ABCAM1_0964 PF12697 Alpha/beta hydrolase family ABCAM1_0966 PF03447 Homoserine dehydrogenase, NAD binding domain ABCAM1_0966 PF01958 Domain of unknown function DUF108 ABCAM1_0967 PF00171 Aldehyde dehydrogenase family ABCAM1_0968 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABCAM1_0968 PF00205 Thiamine pyrophosphate enzyme, central domain ABCAM1_0968 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABCAM1_0970 PF07690 Major Facilitator Superfamily ABCAM1_0971 PF01327 Polypeptide deformylase ABCAM1_0972 PF04960 Glutaminase ABCAM1_0973 PF02311 AraC-like ligand binding domain ABCAM1_0973 PF12833 Helix-turn-helix domain ABCAM1_0974 PF07690 Major Facilitator Superfamily ABCAM1_0975 PF01263 Aldose 1-epimerase ABCAM1_0977 PF03466 LysR substrate binding domain ABCAM1_0977 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_0979 PF07690 Major Facilitator Superfamily ABCAM1_0980 PF00456 Transketolase, thiamine diphosphate binding domain ABCAM1_0981 PF02780 Transketolase, C-terminal domain ABCAM1_0981 PF02779 Transketolase, pyrimidine binding domain ABCAM1_0982 PF02310 B12 binding domain ABCAM1_0982 PF00809 Pterin binding enzyme ABCAM1_0982 PF02607 B12 binding domain ABCAM1_0982 PF02574 Homocysteine S-methyltransferase ABCAM1_0982 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABCAM1_0983 PF01384 Phosphate transporter family ABCAM1_0988 PF03781 Sulfatase-modifying factor enzyme 1 ABCAM1_0989 PF00884 Sulfatase ABCAM1_0991 PF01521 Iron-sulphur cluster biosynthesis ABCAM1_0991 PF01106 NifU-like domain ABCAM1_0992 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_0992 PF00593 TonB dependent receptor ABCAM1_0996 PF00484 Carbonic anhydrase ABCAM1_0999 PF00005 ABC transporter ABCAM1_1001 PF01694 Rhomboid family ABCAM1_1002 PF00912 Transglycosylase ABCAM1_1003 PF02503 Polyphosphate kinase middle domain ABCAM1_1003 PF13089 Polyphosphate kinase N-terminal domain ABCAM1_1003 PF13090 Polyphosphate kinase C-terminal domain 2 ABCAM1_1003 PF17941 Polyphosphate kinase C-terminal domain 1 ABCAM1_1005 PF03466 LysR substrate binding domain ABCAM1_1005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1006 PF00561 alpha/beta hydrolase fold ABCAM1_1007 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1007 PF18113 Rubredoxin binding C-terminal domain ABCAM1_1008 PF00301 Rubredoxin ABCAM1_1011 PF00152 tRNA synthetases class II (D, K and N) ABCAM1_1011 PF01336 OB-fold nucleic acid binding domain ABCAM1_1012 PF14052 Capsule assembly protein Wzi ABCAM1_1014 PF01507 Phosphoadenosine phosphosulfate reductase family ABCAM1_1015 PF00009 Elongation factor Tu GTP binding domain ABCAM1_1018 PF03600 Citrate transporter ABCAM1_1021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1021 PF03466 LysR substrate binding domain ABCAM1_1022 PF00463 Isocitrate lyase family ABCAM1_1025 PF01774 UreD urease accessory protein ABCAM1_1026 PF00547 Urease, gamma subunit ABCAM1_1027 PF00699 Urease beta subunit ABCAM1_1029 PF00449 Urease alpha-subunit, N-terminal domain ABCAM1_1029 PF01979 Amidohydrolase family ABCAM1_1030 PF02814 UreE urease accessory protein, N-terminal domain ABCAM1_1030 PF05194 UreE urease accessory protein, C-terminal domain ABCAM1_1031 PF01730 UreF ABCAM1_1032 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABCAM1_1035 PF00905 Penicillin binding protein transpeptidase domain ABCAM1_1035 PF03717 Penicillin-binding Protein dimerisation domain ABCAM1_1038 PF05191 Adenylate kinase, active site lid ABCAM1_1039 PF00730 HhH-GPD superfamily base excision DNA repair protein ABCAM1_1039 PF10576 Iron-sulfur binding domain of endonuclease III ABCAM1_1039 PF00633 Helix-hairpin-helix motif ABCAM1_1040 PF04060 Putative Fe-S cluster ABCAM1_1044 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABCAM1_1045 PF02590 Predicted SPOUT methyltransferase ABCAM1_1046 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_1046 PF05362 Lon protease (S16) C-terminal proteolytic domain ABCAM1_1046 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABCAM1_1047 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_1047 PF13359 DDE superfamily endonuclease ABCAM1_1048 PF13359 DDE superfamily endonuclease ABCAM1_1048 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_1049 PF05658 Head domain of trimeric autotransporter adhesin ABCAM1_1049 PF03895 YadA-like membrane anchor domain ABCAM1_1049 PF13018 Extended Signal Peptide of Type V secretion system ABCAM1_1049 PF05662 Coiled stalk of trimeric autotransporter adhesin ABCAM1_1051 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABCAM1_1064 PF01726 LexA DNA binding domain ABCAM1_1064 PF00717 Peptidase S24-like ABCAM1_1065 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ABCAM1_1068 PF00145 C-5 cytosine-specific DNA methylase ABCAM1_1083 PF06381 Protein of unknown function (DUF1073) ABCAM1_1087 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) ABCAM1_1111 PF13438 Domain of unknown function (DUF4113) ABCAM1_1111 PF11799 impB/mucB/samB family C-terminal domain ABCAM1_1111 PF00817 impB/mucB/samB family ABCAM1_1112 PF00717 Peptidase S24-like ABCAM1_1121 PF00557 Metallopeptidase family M24 ABCAM1_1121 PF05195 Aminopeptidase P, N-terminal domain ABCAM1_1122 PF01494 FAD binding domain ABCAM1_1123 PF01494 FAD binding domain ABCAM1_1125 PF13411 MerR HTH family regulatory protein ABCAM1_1127 PF01810 LysE type translocator ABCAM1_1128 PF03466 LysR substrate binding domain ABCAM1_1128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABCAM1_1131 PF02021 Uncharacterised protein family UPF0102 ABCAM1_1132 PF04972 BON domain ABCAM1_1134 PF00293 NUDIX domain ABCAM1_1134 PF09297 NADH pyrophosphatase zinc ribbon domain ABCAM1_1136 PF00929 Exonuclease ABCAM1_1137 PF01464 Transglycosylase SLT domain ABCAM1_1137 PF01476 LysM domain ABCAM1_1137 PF01476 LysM domain ABCAM1_1137 PF01464 Transglycosylase SLT domain ABCAM1_1138 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABCAM1_1139 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1140 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1140 PF12911 N-terminal TM domain of oligopeptide transport permease C ABCAM1_1141 PF00005 ABC transporter ABCAM1_1141 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABCAM1_1142 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1142 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_1143 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_1143 PF00593 TonB dependent receptor ABCAM1_1146 PF01979 Amidohydrolase family ABCAM1_1149 PF00764 Arginosuccinate synthase ABCAM1_1150 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_1152 PF05987 Bacterial protein of unknown function (DUF898) ABCAM1_1153 PF13737 Transposase DDE domain ABCAM1_1154 PF03180 NLPA lipoprotein ABCAM1_1157 PF03783 Curli production assembly/transport component CsgG ABCAM1_1159 PF05643 Putative bacterial lipoprotein (DUF799) ABCAM1_1161 PF00324 Amino acid permease ABCAM1_1162 PF01266 FAD dependent oxidoreductase ABCAM1_1163 PF00324 Amino acid permease ABCAM1_1165 PF07729 FCD domain ABCAM1_1165 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1167 PF00171 Aldehyde dehydrogenase family ABCAM1_1169 PF00202 Aminotransferase class-III ABCAM1_1171 PF13737 Transposase DDE domain ABCAM1_1173 PF00106 short chain dehydrogenase ABCAM1_1174 PF00743 Flavin-binding monooxygenase-like ABCAM1_1176 PF00860 Permease family ABCAM1_1177 PF00962 Adenosine/AMP deaminase ABCAM1_1178 PF13333 Integrase core domain ABCAM1_1178 PF00665 Integrase core domain ABCAM1_1178 PF13276 HTH-like domain ABCAM1_1185 PF02599 Global regulator protein family ABCAM1_1186 PF13737 Transposase DDE domain ABCAM1_1187 PF00696 Amino acid kinase family ABCAM1_1187 PF13840 ACT domain ABCAM1_1187 PF01842 ACT domain ABCAM1_1212 PF13276 HTH-like domain ABCAM1_1212 PF13333 Integrase core domain ABCAM1_1212 PF00665 Integrase core domain ABCAM1_1213 PF01527 Transposase ABCAM1_1217 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ABCAM1_1222 PF00884 Sulfatase ABCAM1_1222 PF08019 Phosphoethanolamine transferase EptA/EptB ABCAM1_1224 PF13356 Arm DNA-binding domain ABCAM1_1224 PF00589 Phage integrase family ABCAM1_1225 PF02272 DHHA1 domain ABCAM1_1225 PF01411 tRNA synthetases class II (A) ABCAM1_1225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABCAM1_1226 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABCAM1_1226 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABCAM1_1227 PF13393 Histidyl-tRNA synthetase ABCAM1_1228 PF00709 Adenylosuccinate synthetase ABCAM1_1231 PF00248 Aldo/keto reductase family ABCAM1_1232 PF00027 Cyclic nucleotide-binding domain ABCAM1_1232 PF13545 Crp-like helix-turn-helix domain ABCAM1_1233 PF02566 OsmC-like protein ABCAM1_1236 PF10431 C-terminal, D2-small domain, of ClpB protein ABCAM1_1236 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_1236 PF02861 Clp amino terminal domain, pathogenicity island component ABCAM1_1236 PF07724 AAA domain (Cdc48 subfamily) ABCAM1_1236 PF17871 AAA lid domain ABCAM1_1239 PF01170 Putative RNA methylase family UPF0020 ABCAM1_1239 PF10672 S-adenosylmethionine-dependent methyltransferase ABCAM1_1239 PF02926 THUMP domain ABCAM1_1241 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABCAM1_1241 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABCAM1_1242 PF01979 Amidohydrolase family ABCAM1_1243 PF00691 OmpA family ABCAM1_1243 PF13488 Glycine zipper ABCAM1_1245 PF00043 Glutathione S-transferase, C-terminal domain ABCAM1_1245 PF13417 Glutathione S-transferase, N-terminal domain ABCAM1_1247 PF13737 Transposase DDE domain ABCAM1_1248 PF00872 Transposase, Mutator family ABCAM1_1250 PF02390 Putative methyltransferase ABCAM1_1252 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_1252 PF00043 Glutathione S-transferase, C-terminal domain ABCAM1_1254 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1254 PF13192 Thioredoxin domain ABCAM1_1258 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABCAM1_1258 PF00578 AhpC/TSA family ABCAM1_1259 PF00270 DEAD/DEAH box helicase ABCAM1_1259 PF11898 Domain of unknown function (DUF3418) ABCAM1_1259 PF04408 Helicase associated domain (HA2) ABCAM1_1259 PF00271 Helicase conserved C-terminal domain ABCAM1_1259 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABCAM1_1260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABCAM1_1260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABCAM1_1262 PF07690 Major Facilitator Superfamily ABCAM1_1263 PF03594 Benzoate membrane transport protein ABCAM1_1264 PF00106 short chain dehydrogenase ABCAM1_1265 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_1265 PF00970 Oxidoreductase FAD-binding domain ABCAM1_1265 PF00175 Oxidoreductase NAD-binding domain ABCAM1_1266 PF00866 Ring hydroxylating beta subunit ABCAM1_1267 PF00355 Rieske [2Fe-2S] domain ABCAM1_1267 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABCAM1_1268 PF03466 LysR substrate binding domain ABCAM1_1268 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1270 PF00403 Heavy-metal-associated domain ABCAM1_1271 PF00376 MerR family regulatory protein ABCAM1_1271 PF09278 MerR, DNA binding ABCAM1_1278 PF02601 Exonuclease VII, large subunit ABCAM1_1278 PF13742 OB-fold nucleic acid binding domain ABCAM1_1284 PF01810 LysE type translocator ABCAM1_1285 PF13737 Transposase DDE domain ABCAM1_1286 PF00313 'Cold-shock' DNA-binding domain ABCAM1_1293 PF00665 Integrase core domain ABCAM1_1293 PF13333 Integrase core domain ABCAM1_1293 PF13276 HTH-like domain ABCAM1_1295 PF00872 Transposase, Mutator family ABCAM1_1297 PF07690 Major Facilitator Superfamily ABCAM1_1298 PF01638 HxlR-like helix-turn-helix ABCAM1_1304 PF01406 tRNA synthetases class I (C) catalytic domain ABCAM1_1304 PF09190 DALR domain ABCAM1_1305 PF01380 SIS domain ABCAM1_1305 PF00571 CBS domain ABCAM1_1308 PF03968 OstA-like protein ABCAM1_1309 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABCAM1_1309 PF00005 ABC transporter ABCAM1_1310 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_1311 PF02321 Outer membrane efflux protein ABCAM1_1312 PF00005 ABC transporter ABCAM1_1312 PF03412 Peptidase C39 family ABCAM1_1312 PF00664 ABC transporter transmembrane region ABCAM1_1314 PF01205 Uncharacterized protein family UPF0029 ABCAM1_1315 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_1317 PF01596 O-methyltransferase ABCAM1_1319 PF11953 Domain of unknown function (DUF3470) ABCAM1_1319 PF00037 4Fe-4S binding domain ABCAM1_1321 PF05192 MutS domain III ABCAM1_1321 PF05190 MutS family domain IV ABCAM1_1321 PF05188 MutS domain II ABCAM1_1321 PF00488 MutS domain V ABCAM1_1321 PF01624 MutS domain I ABCAM1_1323 PF00892 EamA-like transporter family ABCAM1_1324 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_1324 PF03707 Bacterial signalling protein N terminal repeat ABCAM1_1324 PF00563 EAL domain ABCAM1_1325 PF03279 Bacterial lipid A biosynthesis acyltransferase ABCAM1_1330 PF01177 Asp/Glu/Hydantoin racemase ABCAM1_1331 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_1332 PF00005 ABC transporter ABCAM1_1333 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1334 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABCAM1_1338 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCAM1_1338 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCAM1_1341 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_1344 PF13276 HTH-like domain ABCAM1_1344 PF00665 Integrase core domain ABCAM1_1344 PF13333 Integrase core domain ABCAM1_1346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1346 PF03466 LysR substrate binding domain ABCAM1_1348 PF01566 Natural resistance-associated macrophage protein ABCAM1_1349 PF03746 LamB/YcsF family ABCAM1_1350 PF07286 Protein of unknown function (DUF1445) ABCAM1_1352 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCAM1_1352 PF00364 Biotin-requiring enzyme ABCAM1_1352 PF02785 Biotin carboxylase C-terminal domain ABCAM1_1352 PF00289 Biotin carboxylase, N-terminal domain ABCAM1_1353 PF00654 Voltage gated chloride channel ABCAM1_1354 PF00684 DnaJ central domain ABCAM1_1354 PF01556 DnaJ C terminal domain ABCAM1_1354 PF00226 DnaJ domain ABCAM1_1357 PF13823 Alcohol dehydrogenase GroES-associated ABCAM1_1357 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_1357 PF00107 Zinc-binding dehydrogenase ABCAM1_1360 PF02677 Epoxyqueuosine reductase QueH ABCAM1_1362 PF09278 MerR, DNA binding ABCAM1_1362 PF00376 MerR family regulatory protein ABCAM1_1365 PF00701 Dihydrodipicolinate synthetase family ABCAM1_1367 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1368 PF05544 Proline racemase ABCAM1_1371 PF04324 BFD-like [2Fe-2S] binding domain ABCAM1_1371 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1375 PF00171 Aldehyde dehydrogenase family ABCAM1_1376 PF13520 Amino acid permease ABCAM1_1380 PF13276 HTH-like domain ABCAM1_1380 PF00665 Integrase core domain ABCAM1_1380 PF13333 Integrase core domain ABCAM1_1382 PF13737 Transposase DDE domain ABCAM1_1384 PF16295 Tetracyclin repressor-like, C-terminal domain ABCAM1_1384 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_1385 PF00202 Aminotransferase class-III ABCAM1_1386 PF12833 Helix-turn-helix domain ABCAM1_1386 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABCAM1_1388 PF01636 Phosphotransferase enzyme family ABCAM1_1390 PF13520 Amino acid permease ABCAM1_1391 PF00199 Catalase ABCAM1_1392 PF01292 Prokaryotic cytochrome b561 ABCAM1_1396 PF12697 Alpha/beta hydrolase family ABCAM1_1397 PF01613 Flavin reductase like domain ABCAM1_1398 PF00296 Luciferase-like monooxygenase ABCAM1_1399 PF00171 Aldehyde dehydrogenase family ABCAM1_1401 PF00171 Aldehyde dehydrogenase family ABCAM1_1402 PF02627 Carboxymuconolactone decarboxylase family ABCAM1_1403 PF03466 LysR substrate binding domain ABCAM1_1403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1404 PF02525 Flavodoxin-like fold ABCAM1_1405 PF09339 IclR helix-turn-helix domain ABCAM1_1405 PF01614 Bacterial transcriptional regulator ABCAM1_1406 PF01494 FAD binding domain ABCAM1_1407 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1407 PF07702 UTRA domain ABCAM1_1409 PF00005 ABC transporter ABCAM1_1409 PF08402 TOBE domain ABCAM1_1410 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1411 PF01266 FAD dependent oxidoreductase ABCAM1_1412 PF00266 Aminotransferase class-V ABCAM1_1413 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_1414 PF07690 Major Facilitator Superfamily ABCAM1_1415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1415 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1416 PF02515 CoA-transferase family III ABCAM1_1417 PF09339 IclR helix-turn-helix domain ABCAM1_1418 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_1419 PF03060 Nitronate monooxygenase ABCAM1_1421 PF13737 Transposase DDE domain ABCAM1_1424 PF07690 Major Facilitator Superfamily ABCAM1_1425 PF09339 IclR helix-turn-helix domain ABCAM1_1426 PF00108 Thiolase, N-terminal domain ABCAM1_1426 PF02803 Thiolase, C-terminal domain ABCAM1_1427 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABCAM1_1427 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCAM1_1427 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCAM1_1429 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_1430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1430 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1431 PF07690 Major Facilitator Superfamily ABCAM1_1432 PF01144 Coenzyme A transferase ABCAM1_1433 PF01144 Coenzyme A transferase ABCAM1_1435 PF07690 Major Facilitator Superfamily ABCAM1_1437 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1437 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1437 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1437 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCAM1_1440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1440 PF03466 LysR substrate binding domain ABCAM1_1441 PF00682 HMGL-like ABCAM1_1442 PF00364 Biotin-requiring enzyme ABCAM1_1442 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCAM1_1442 PF00289 Biotin carboxylase, N-terminal domain ABCAM1_1442 PF02785 Biotin carboxylase C-terminal domain ABCAM1_1443 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_1444 PF01039 Carboxyl transferase domain ABCAM1_1447 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_1448 PF00501 AMP-binding enzyme ABCAM1_1448 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_1449 PF00872 Transposase, Mutator family ABCAM1_1452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1452 PF03466 LysR substrate binding domain ABCAM1_1456 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_1461 PF00994 Probable molybdopterin binding domain ABCAM1_1461 PF18146 Damage-inducible protein CinA KH domain ABCAM1_1461 PF02464 Competence-damaged protein ABCAM1_1463 PF18011 C-terminal domain found in long catalases ABCAM1_1463 PF06628 Catalase-related immune-responsive ABCAM1_1463 PF00199 Catalase ABCAM1_1468 PF00717 Peptidase S24-like ABCAM1_1470 PF01037 Lrp/AsnC ligand binding domain ABCAM1_1470 PF13404 AsnC-type helix-turn-helix domain ABCAM1_1472 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_1472 PF00072 Response regulator receiver domain ABCAM1_1472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_1472 PF09308 LuxQ, periplasmic ABCAM1_1473 PF00072 Response regulator receiver domain ABCAM1_1474 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ABCAM1_1476 PF03466 LysR substrate binding domain ABCAM1_1476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1477 PF07690 Major Facilitator Superfamily ABCAM1_1479 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1480 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1481 PF00005 ABC transporter ABCAM1_1482 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABCAM1_1483 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABCAM1_1484 PF03466 LysR substrate binding domain ABCAM1_1484 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1485 PF01810 LysE type translocator ABCAM1_1486 PF00266 Aminotransferase class-V ABCAM1_1488 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_1489 PF00581 Rhodanese-like domain ABCAM1_1494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1494 PF03466 LysR substrate binding domain ABCAM1_1495 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_1496 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_1496 PF14834 Glutathione S-transferase, C-terminal domain ABCAM1_1497 PF03466 LysR substrate binding domain ABCAM1_1497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1498 PF03788 LrgA family ABCAM1_1499 PF04172 LrgB-like family ABCAM1_1500 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1500 PF00155 Aminotransferase class I and II ABCAM1_1504 PF00106 short chain dehydrogenase ABCAM1_1505 PF07690 Major Facilitator Superfamily ABCAM1_1506 PF16957 Malonate decarboxylase, alpha subunit, transporter ABCAM1_1507 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABCAM1_1508 PF06857 Malonate decarboxylase delta subunit (MdcD) ABCAM1_1509 PF01039 Carboxyl transferase domain ABCAM1_1511 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABCAM1_1512 PF00698 Acyl transferase domain ABCAM1_1515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1515 PF03466 LysR substrate binding domain ABCAM1_1516 PF00155 Aminotransferase class I and II ABCAM1_1516 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1518 PF02322 Cytochrome bd terminal oxidase subunit II ABCAM1_1519 PF01654 Cytochrome bd terminal oxidase subunit I ABCAM1_1521 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1521 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1521 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1522 PF13737 Transposase DDE domain ABCAM1_1523 PF00296 Luciferase-like monooxygenase ABCAM1_1524 PF00083 Sugar (and other) transporter ABCAM1_1527 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABCAM1_1528 PF00005 ABC transporter ABCAM1_1529 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABCAM1_1531 PF01177 Asp/Glu/Hydantoin racemase ABCAM1_1532 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABCAM1_1534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1534 PF03466 LysR substrate binding domain ABCAM1_1536 PF01979 Amidohydrolase family ABCAM1_1536 PF13382 Adenine deaminase C-terminal domain ABCAM1_1538 PF03960 ArsC family ABCAM1_1539 PF01022 Bacterial regulatory protein, arsR family ABCAM1_1540 PF01758 Sodium Bile acid symporter family ABCAM1_1541 PF03466 LysR substrate binding domain ABCAM1_1541 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1544 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1544 PF13192 Thioredoxin domain ABCAM1_1547 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_1548 PF00588 SpoU rRNA Methylase family ABCAM1_1549 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABCAM1_1549 PF02811 PHP domain ABCAM1_1549 PF01336 OB-fold nucleic acid binding domain ABCAM1_1549 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABCAM1_1549 PF14579 Helix-hairpin-helix motif ABCAM1_1550 PF13737 Transposase DDE domain ABCAM1_1551 PF00375 Sodium:dicarboxylate symporter family ABCAM1_1552 PF00155 Aminotransferase class I and II ABCAM1_1553 PF01641 SelR domain ABCAM1_1554 PF00255 Glutathione peroxidase ABCAM1_1555 PF12852 Cupin ABCAM1_1555 PF12833 Helix-turn-helix domain ABCAM1_1557 PF00155 Aminotransferase class I and II ABCAM1_1558 PF01909 Nucleotidyltransferase domain ABCAM1_1558 PF08335 GlnD PII-uridylyltransferase ABCAM1_1558 PF01966 HD domain ABCAM1_1559 PF02222 ATP-grasp domain ABCAM1_1561 PF05437 Branched-chain amino acid transport protein (AzlD) ABCAM1_1562 PF03591 AzlC protein ABCAM1_1567 PF01926 50S ribosome-binding GTPase ABCAM1_1567 PF06071 Protein of unknown function (DUF933) ABCAM1_1568 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1569 PF00005 ABC transporter ABCAM1_1569 PF09383 NIL domain ABCAM1_1570 PF03180 NLPA lipoprotein ABCAM1_1571 PF03180 NLPA lipoprotein ABCAM1_1572 PF00296 Luciferase-like monooxygenase ABCAM1_1574 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1574 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1577 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1580 PF00005 ABC transporter ABCAM1_1582 PF01037 Lrp/AsnC ligand binding domain ABCAM1_1583 PF01709 Transcriptional regulator ABCAM1_1585 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_1590 PF12008 Type I restriction and modification enzyme - subunit R C terminal ABCAM1_1590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABCAM1_1590 PF18766 SWI2/SNF2 ATPase ABCAM1_1594 PF02384 N-6 DNA Methylase ABCAM1_1594 PF12161 HsdM N-terminal domain ABCAM1_1597 PF00665 Integrase core domain ABCAM1_1597 PF13333 Integrase core domain ABCAM1_1597 PF13276 HTH-like domain ABCAM1_1598 PF01527 Transposase ABCAM1_1601 PF00665 Integrase core domain ABCAM1_1601 PF13276 HTH-like domain ABCAM1_1601 PF13333 Integrase core domain ABCAM1_1602 PF01527 Transposase ABCAM1_1604 PF00872 Transposase, Mutator family ABCAM1_1605 PF00589 Phage integrase family ABCAM1_1605 PF14659 Phage integrase, N-terminal SAM-like domain ABCAM1_1605 PF13356 Arm DNA-binding domain ABCAM1_1609 PF13737 Transposase DDE domain ABCAM1_1612 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABCAM1_1614 PF00892 EamA-like transporter family ABCAM1_1618 PF13953 PapC C-terminal domain ABCAM1_1618 PF13954 PapC N-terminal domain ABCAM1_1618 PF00577 Outer membrane usher protein ABCAM1_1619 PF02753 Pili assembly chaperone PapD, C-terminal domain ABCAM1_1619 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABCAM1_1620 PF16970 Type-1 fimbrial protein, A ABCAM1_1623 PF04055 Radical SAM superfamily ABCAM1_1623 PF06968 Biotin and Thiamin Synthesis associated domain ABCAM1_1624 PF08331 Domain of unknown function (DUF1730) ABCAM1_1625 PF01256 Carbohydrate kinase ABCAM1_1625 PF03853 YjeF-related protein N-terminus ABCAM1_1626 PF02075 Crossover junction endodeoxyribonuclease RuvC ABCAM1_1629 PF00905 Penicillin binding protein transpeptidase domain ABCAM1_1633 PF02772 S-adenosylmethionine synthetase, central domain ABCAM1_1633 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABCAM1_1633 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABCAM1_1634 PF00456 Transketolase, thiamine diphosphate binding domain ABCAM1_1634 PF02780 Transketolase, C-terminal domain ABCAM1_1634 PF02779 Transketolase, pyrimidine binding domain ABCAM1_1636 PF04264 YceI-like domain ABCAM1_1638 PF09992 Phosphodiester glycosidase ABCAM1_1640 PF05958 tRNA (Uracil-5-)-methyltransferase ABCAM1_1641 PF04229 GrpB protein ABCAM1_1642 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABCAM1_1642 PF14850 DNA-binding domain of Proline dehydrogenase ABCAM1_1642 PF00171 Aldehyde dehydrogenase family ABCAM1_1642 PF01619 Proline dehydrogenase ABCAM1_1643 PF01037 Lrp/AsnC ligand binding domain ABCAM1_1644 PF00474 Sodium:solute symporter family ABCAM1_1645 PF02146 Sir2 family ABCAM1_1646 PF01597 Glycine cleavage H-protein ABCAM1_1647 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABCAM1_1647 PF12833 Helix-turn-helix domain ABCAM1_1649 PF00664 ABC transporter transmembrane region ABCAM1_1649 PF00005 ABC transporter ABCAM1_1650 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABCAM1_1651 PF06912 Protein of unknown function (DUF1275) ABCAM1_1652 PF00375 Sodium:dicarboxylate symporter family ABCAM1_1655 PF08007 Cupin superfamily protein ABCAM1_1656 PF02545 Maf-like protein ABCAM1_1658 PF00162 Phosphoglycerate kinase ABCAM1_1660 PF01116 Fructose-bisphosphate aldolase class-II ABCAM1_1661 PF09312 SurA N-terminal domain ABCAM1_1661 PF00639 PPIC-type PPIASE domain ABCAM1_1662 PF04453 LPS transport system D ABCAM1_1662 PF03968 OstA-like protein ABCAM1_1663 PF01636 Phosphotransferase enzyme family ABCAM1_1664 PF00483 Nucleotidyl transferase ABCAM1_1665 PF02527 rRNA small subunit methyltransferase G ABCAM1_1666 PF13614 AAA domain ABCAM1_1667 PF02195 ParB-like nuclease domain ABCAM1_1667 PF17762 HTH domain found in ParB protein ABCAM1_1668 PF01618 MotA/TolQ/ExbB proton channel family ABCAM1_1670 PF00005 ABC transporter ABCAM1_1670 PF00664 ABC transporter transmembrane region ABCAM1_1672 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABCAM1_1673 PF02348 Cytidylyltransferase ABCAM1_1674 PF09115 DNA polymerase III, delta subunit, C terminal ABCAM1_1676 PF01026 TatD related DNase ABCAM1_1679 PF07963 Prokaryotic N-terminal methylation motif ABCAM1_1679 PF02501 Type II secretion system (T2SS), protein I ABCAM1_1680 PF07963 Prokaryotic N-terminal methylation motif ABCAM1_1680 PF11612 Type II secretion system (T2SS), protein J ABCAM1_1681 PF03934 Type II secretion system (T2SS), protein K ABCAM1_1683 PF03167 Uracil DNA glycosylase superfamily ABCAM1_1685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABCAM1_1687 PF02224 Cytidylate kinase ABCAM1_1688 PF00575 S1 RNA binding domain ABCAM1_1689 PF00216 Bacterial DNA-binding protein ABCAM1_1691 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABCAM1_1693 PF00872 Transposase, Mutator family ABCAM1_1694 PF00743 Flavin-binding monooxygenase-like ABCAM1_1696 PF03969 AFG1-like ATPase ABCAM1_1697 PF01274 Malate synthase ABCAM1_1698 PF02472 Biopolymer transport protein ExbD/TolR ABCAM1_1699 PF02472 Biopolymer transport protein ExbD/TolR ABCAM1_1700 PF01618 MotA/TolQ/ExbB proton channel family ABCAM1_1702 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_1702 PF00593 TonB dependent receptor ABCAM1_1706 PF01432 Peptidase family M3 ABCAM1_1707 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1708 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1713 PF00459 Inositol monophosphatase family ABCAM1_1715 PF01649 Ribosomal protein S20 ABCAM1_1717 PF03737 Aldolase/RraA ABCAM1_1721 PF02559 CarD-like/TRCF domain ABCAM1_1721 PF00270 DEAD/DEAH box helicase ABCAM1_1721 PF00271 Helicase conserved C-terminal domain ABCAM1_1721 PF03461 TRCF domain ABCAM1_1721 PF17757 UvrB interaction domain ABCAM1_1723 PF00211 Adenylate and Guanylate cyclase catalytic domain ABCAM1_1724 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_1725 PF00012 Hsp70 protein ABCAM1_1726 PF07743 HSCB C-terminal oligomerisation domain ABCAM1_1726 PF00226 DnaJ domain ABCAM1_1727 PF01521 Iron-sulphur cluster biosynthesis ABCAM1_1728 PF01592 NifU-like N terminal domain ABCAM1_1729 PF00266 Aminotransferase class-V ABCAM1_1730 PF02082 Transcriptional regulator ABCAM1_1733 PF00216 Bacterial DNA-binding protein ABCAM1_1734 PF09312 SurA N-terminal domain ABCAM1_1734 PF00639 PPIC-type PPIASE domain ABCAM1_1735 PF12852 Cupin ABCAM1_1735 PF12833 Helix-turn-helix domain ABCAM1_1736 PF00487 Fatty acid desaturase ABCAM1_1737 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1737 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1737 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1738 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1738 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1738 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1739 PF03109 ABC1 family ABCAM1_1741 PF04073 Aminoacyl-tRNA editing domain ABCAM1_1742 PF06276 Ferric iron reductase FhuF-like transporter ABCAM1_1742 PF04183 IucA / IucC family ABCAM1_1743 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABCAM1_1744 PF07690 Major Facilitator Superfamily ABCAM1_1745 PF04183 IucA / IucC family ABCAM1_1745 PF06276 Ferric iron reductase FhuF-like transporter ABCAM1_1746 PF04183 IucA / IucC family ABCAM1_1746 PF06276 Ferric iron reductase FhuF-like transporter ABCAM1_1748 PF03737 Aldolase/RraA ABCAM1_1749 PF00593 TonB dependent receptor ABCAM1_1749 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_1754 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_1756 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABCAM1_1757 PF02277 Phosphoribosyltransferase ABCAM1_1761 PF00300 Histidine phosphatase superfamily (branch 1) ABCAM1_1763 PF02654 Cobalamin-5-phosphate synthase ABCAM1_1764 PF00793 DAHP synthetase I family ABCAM1_1765 PF01925 Sulfite exporter TauE/SafE ABCAM1_1769 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_1769 PF00593 TonB dependent receptor ABCAM1_1770 PF02684 Lipid-A-disaccharide synthetase ABCAM1_1775 PF13276 HTH-like domain ABCAM1_1775 PF13333 Integrase core domain ABCAM1_1775 PF00665 Integrase core domain ABCAM1_1777 PF00005 ABC transporter ABCAM1_1784 PF01230 HIT domain ABCAM1_1791 PF08241 Methyltransferase domain ABCAM1_1792 PF00561 alpha/beta hydrolase fold ABCAM1_1793 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCAM1_1795 PF02575 YbaB/EbfC DNA-binding family ABCAM1_1796 PF13662 Toprim domain ABCAM1_1796 PF02132 RecR protein ABCAM1_1797 PF00570 HRDC domain ABCAM1_1797 PF01612 3'-5' exonuclease ABCAM1_1801 PF05166 YcgL domain ABCAM1_1803 PF01434 Peptidase family M41 ABCAM1_1803 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_1803 PF17862 AAA+ lid domain ABCAM1_1805 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_1806 PF05175 Methyltransferase small domain ABCAM1_1807 PF01264 Chorismate synthase ABCAM1_1808 PF08448 PAS fold ABCAM1_1808 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_1811 PF04055 Radical SAM superfamily ABCAM1_1812 PF00676 Dehydrogenase E1 component ABCAM1_1813 PF02779 Transketolase, pyrimidine binding domain ABCAM1_1813 PF02780 Transketolase, C-terminal domain ABCAM1_1814 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABCAM1_1814 PF02817 e3 binding domain ABCAM1_1814 PF00364 Biotin-requiring enzyme ABCAM1_1815 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCAM1_1816 PF00106 short chain dehydrogenase ABCAM1_1817 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_1817 PF00107 Zinc-binding dehydrogenase ABCAM1_1820 PF00072 Response regulator receiver domain ABCAM1_1820 PF02954 Bacterial regulatory protein, Fis family ABCAM1_1820 PF00158 Sigma-54 interaction domain ABCAM1_1821 PF00753 Metallo-beta-lactamase superfamily ABCAM1_1821 PF04273 Putative phosphatase (DUF442) ABCAM1_1823 PF01925 Sulfite exporter TauE/SafE ABCAM1_1826 PF06445 GyrI-like small molecule binding domain ABCAM1_1826 PF12833 Helix-turn-helix domain ABCAM1_1827 PF01638 HxlR-like helix-turn-helix ABCAM1_1828 PF02525 Flavodoxin-like fold ABCAM1_1829 PF02417 Chromate transporter ABCAM1_1833 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABCAM1_1834 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1835 PF00005 ABC transporter ABCAM1_1840 PF00593 TonB dependent receptor ABCAM1_1840 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_1841 PF10415 Fumarase C C-terminus ABCAM1_1841 PF00206 Lyase ABCAM1_1845 PF13333 Integrase core domain ABCAM1_1845 PF13276 HTH-like domain ABCAM1_1845 PF00665 Integrase core domain ABCAM1_1846 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1846 PF03466 LysR substrate binding domain ABCAM1_1847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1847 PF03466 LysR substrate binding domain ABCAM1_1848 PF02803 Thiolase, C-terminal domain ABCAM1_1848 PF00108 Thiolase, N-terminal domain ABCAM1_1849 PF02667 Short chain fatty acid transporter ABCAM1_1850 PF01144 Coenzyme A transferase ABCAM1_1851 PF01144 Coenzyme A transferase ABCAM1_1852 PF03466 LysR substrate binding domain ABCAM1_1852 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1858 PF12833 Helix-turn-helix domain ABCAM1_1858 PF06719 AraC-type transcriptional regulator N-terminus ABCAM1_1859 PF07690 Major Facilitator Superfamily ABCAM1_1860 PF01738 Dienelactone hydrolase family ABCAM1_1863 PF01613 Flavin reductase like domain ABCAM1_1865 PF14525 AraC-binding-like domain ABCAM1_1865 PF12833 Helix-turn-helix domain ABCAM1_1866 PF00970 Oxidoreductase FAD-binding domain ABCAM1_1866 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_1866 PF00175 Oxidoreductase NAD-binding domain ABCAM1_1867 PF00866 Ring hydroxylating beta subunit ABCAM1_1868 PF00355 Rieske [2Fe-2S] domain ABCAM1_1868 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABCAM1_1869 PF03459 TOBE domain ABCAM1_1869 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1871 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_1873 PF00106 short chain dehydrogenase ABCAM1_1874 PF00857 Isochorismatase family ABCAM1_1874 PF00550 Phosphopantetheine attachment site ABCAM1_1876 PF00149 Calcineurin-like phosphoesterase ABCAM1_1877 PF02503 Polyphosphate kinase middle domain ABCAM1_1877 PF17941 Polyphosphate kinase C-terminal domain 1 ABCAM1_1877 PF13089 Polyphosphate kinase N-terminal domain ABCAM1_1877 PF13090 Polyphosphate kinase C-terminal domain 2 ABCAM1_1878 PF12706 Beta-lactamase superfamily domain ABCAM1_1879 PF03070 TENA/THI-4/PQQC family ABCAM1_1880 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABCAM1_1881 PF13186 Iron-sulfur cluster-binding domain ABCAM1_1881 PF04055 Radical SAM superfamily ABCAM1_1882 PF01244 Membrane dipeptidase (Peptidase family M19) ABCAM1_1883 PF13737 Transposase DDE domain ABCAM1_1887 PF17760 UvrA interaction domain ABCAM1_1887 PF00005 ABC transporter ABCAM1_1887 PF17755 UvrA DNA-binding domain ABCAM1_1889 PF00873 AcrB/AcrD/AcrF family ABCAM1_1890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_1890 PF00529 HlyD membrane-fusion protein of T1SS ABCAM1_1891 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_1891 PF00072 Response regulator receiver domain ABCAM1_1892 PF00672 HAMP domain ABCAM1_1892 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_1892 PF16527 Two-component sensor protein CpxA, periplasmic domain ABCAM1_1892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_1896 PF12833 Helix-turn-helix domain ABCAM1_1896 PF02311 AraC-like ligand binding domain ABCAM1_1897 PF12146 Serine aminopeptidase, S33 ABCAM1_1900 PF13291 ACT domain ABCAM1_1900 PF04607 Region found in RelA / SpoT proteins ABCAM1_1900 PF02824 TGS domain ABCAM1_1905 PF07690 Major Facilitator Superfamily ABCAM1_1907 PF13533 Biotin-lipoyl like ABCAM1_1911 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABCAM1_1912 PF14572 Phosphoribosyl synthetase-associated domain ABCAM1_1912 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABCAM1_1916 PF00005 ABC transporter ABCAM1_1919 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_1919 PF00107 Zinc-binding dehydrogenase ABCAM1_1922 PF06719 AraC-type transcriptional regulator N-terminus ABCAM1_1922 PF12833 Helix-turn-helix domain ABCAM1_1923 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCAM1_1923 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCAM1_1924 PF07690 Major Facilitator Superfamily ABCAM1_1925 PF01370 NAD dependent epimerase/dehydratase family ABCAM1_1929 PF00920 Dehydratase family ABCAM1_1930 PF00171 Aldehyde dehydrogenase family ABCAM1_1933 PF00529 HlyD membrane-fusion protein of T1SS ABCAM1_1933 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_1936 PF03466 LysR substrate binding domain ABCAM1_1936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1939 PF13333 Integrase core domain ABCAM1_1939 PF00665 Integrase core domain ABCAM1_1939 PF13276 HTH-like domain ABCAM1_1940 PF08450 SMP-30/Gluconolactonase/LRE-like region ABCAM1_1943 PF04909 Amidohydrolase ABCAM1_1944 PF07690 Major Facilitator Superfamily ABCAM1_1947 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ABCAM1_1954 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_1954 PF00501 AMP-binding enzyme ABCAM1_1957 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_1957 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_1957 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCAM1_1957 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_1958 PF01575 MaoC like domain ABCAM1_1959 PF00106 short chain dehydrogenase ABCAM1_1962 PF03466 LysR substrate binding domain ABCAM1_1962 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1963 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_1963 PF08359 YsiA-like protein, C-terminal region ABCAM1_1964 PF12706 Beta-lactamase superfamily domain ABCAM1_1966 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1968 PF00376 MerR family regulatory protein ABCAM1_1968 PF09278 MerR, DNA binding ABCAM1_1970 PF00106 short chain dehydrogenase ABCAM1_1971 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_1971 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_1972 PF00561 alpha/beta hydrolase fold ABCAM1_1974 PF00171 Aldehyde dehydrogenase family ABCAM1_1976 PF07690 Major Facilitator Superfamily ABCAM1_1977 PF00920 Dehydratase family ABCAM1_1978 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_1978 PF07729 FCD domain ABCAM1_1980 PF03466 LysR substrate binding domain ABCAM1_1980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_1981 PF13378 Enolase C-terminal domain-like ABCAM1_1981 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABCAM1_1982 PF02426 Muconolactone delta-isomerase ABCAM1_1983 PF00775 Dioxygenase ABCAM1_1983 PF04444 Catechol dioxygenase N terminus ABCAM1_1984 PF01144 Coenzyme A transferase ABCAM1_1985 PF01144 Coenzyme A transferase ABCAM1_1986 PF00108 Thiolase, N-terminal domain ABCAM1_1986 PF02803 Thiolase, C-terminal domain ABCAM1_1987 PF12146 Serine aminopeptidase, S33 ABCAM1_1988 PF01804 Penicillin amidase ABCAM1_1989 PF00171 Aldehyde dehydrogenase family ABCAM1_1991 PF07833 Copper amine oxidase N-terminal domain ABCAM1_1991 PF02727 Copper amine oxidase, N2 domain ABCAM1_1991 PF02728 Copper amine oxidase, N3 domain ABCAM1_1991 PF01179 Copper amine oxidase, enzyme domain ABCAM1_1992 PF12833 Helix-turn-helix domain ABCAM1_1992 PF02311 AraC-like ligand binding domain ABCAM1_1993 PF01613 Flavin reductase like domain ABCAM1_1994 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_1994 PF00175 Oxidoreductase NAD-binding domain ABCAM1_1997 PF00355 Rieske [2Fe-2S] domain ABCAM1_1997 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABCAM1_2000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_2001 PF01425 Amidase ABCAM1_2003 PF07690 Major Facilitator Superfamily ABCAM1_2005 PF00106 short chain dehydrogenase ABCAM1_2008 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_2008 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_2008 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_2009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2009 PF03466 LysR substrate binding domain ABCAM1_2010 PF01614 Bacterial transcriptional regulator ABCAM1_2010 PF09339 IclR helix-turn-helix domain ABCAM1_2011 PF00753 Metallo-beta-lactamase superfamily ABCAM1_2013 PF04143 Sulphur transport ABCAM1_2015 PF01011 PQQ enzyme repeat ABCAM1_2015 PF13360 PQQ-like domain ABCAM1_2016 PF04966 Carbohydrate-selective porin, OprB family ABCAM1_2017 PF05048 Periplasmic copper-binding protein (NosD) ABCAM1_2018 PF01487 Type I 3-dehydroquinase ABCAM1_2019 PF00775 Dioxygenase ABCAM1_2020 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABCAM1_2020 PF00775 Dioxygenase ABCAM1_2021 PF02627 Carboxymuconolactone decarboxylase family ABCAM1_2022 PF07690 Major Facilitator Superfamily ABCAM1_2023 PF00561 alpha/beta hydrolase fold ABCAM1_2024 PF10397 Adenylosuccinate lyase C-terminus ABCAM1_2024 PF00206 Lyase ABCAM1_2025 PF02803 Thiolase, C-terminal domain ABCAM1_2025 PF00108 Thiolase, N-terminal domain ABCAM1_2026 PF01144 Coenzyme A transferase ABCAM1_2027 PF01144 Coenzyme A transferase ABCAM1_2028 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABCAM1_2029 PF04977 Septum formation initiator ABCAM1_2030 PF04239 Protein of unknown function (DUF421) ABCAM1_2031 PF00113 Enolase, C-terminal TIM barrel domain ABCAM1_2031 PF03952 Enolase, N-terminal domain ABCAM1_2032 PF00793 DAHP synthetase I family ABCAM1_2033 PF06418 CTP synthase N-terminus ABCAM1_2033 PF00117 Glutamine amidotransferase class-I ABCAM1_2039 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_2039 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2042 PF00793 DAHP synthetase I family ABCAM1_2043 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABCAM1_2044 PF07724 AAA domain (Cdc48 subfamily) ABCAM1_2044 PF17871 AAA lid domain ABCAM1_2044 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_2044 PF02861 Clp amino terminal domain, pathogenicity island component ABCAM1_2044 PF10431 C-terminal, D2-small domain, of ClpB protein ABCAM1_2045 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABCAM1_2047 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABCAM1_2047 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABCAM1_2050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABCAM1_2051 PF00585 C-terminal regulatory domain of Threonine dehydratase ABCAM1_2051 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_2052 PF02254 TrkA-N domain ABCAM1_2052 PF02080 TrkA-C domain ABCAM1_2053 PF02386 Cation transport protein ABCAM1_2054 PF02253 Phospholipase A1 ABCAM1_2055 PF00675 Insulinase (Peptidase family M16) ABCAM1_2055 PF05193 Peptidase M16 inactive domain ABCAM1_2055 PF08367 Peptidase M16C associated ABCAM1_2056 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_2056 PF00593 TonB dependent receptor ABCAM1_2057 PF00294 pfkB family carbohydrate kinase ABCAM1_2059 PF07290 Protein of unknown function (DUF1449) ABCAM1_2061 PF01654 Cytochrome bd terminal oxidase subunit I ABCAM1_2062 PF02322 Cytochrome bd terminal oxidase subunit II ABCAM1_2066 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABCAM1_2068 PF00448 SRP54-type protein, GTPase domain ABCAM1_2068 PF02881 SRP54-type protein, helical bundle domain ABCAM1_2073 PF00571 CBS domain ABCAM1_2073 PF00478 IMP dehydrogenase / GMP reductase domain ABCAM1_2074 PF00202 Aminotransferase class-III ABCAM1_2075 PF00462 Glutaredoxin ABCAM1_2079 PF00557 Metallopeptidase family M24 ABCAM1_2080 PF05525 Branched-chain amino acid transport protein ABCAM1_2085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABCAM1_2085 PF02896 PEP-utilising enzyme, TIM barrel domain ABCAM1_2085 PF00381 PTS HPr component phosphorylation site ABCAM1_2085 PF00391 PEP-utilising enzyme, mobile domain ABCAM1_2085 PF05524 PEP-utilising enzyme, N-terminal ABCAM1_2086 PF00294 pfkB family carbohydrate kinase ABCAM1_2087 PF02378 Phosphotransferase system, EIIC ABCAM1_2087 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABCAM1_2090 PF03707 Bacterial signalling protein N terminal repeat ABCAM1_2090 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_2090 PF00563 EAL domain ABCAM1_2092 PF07995 Glucose / Sorbosone dehydrogenase ABCAM1_2096 PF13333 Integrase core domain ABCAM1_2096 PF00665 Integrase core domain ABCAM1_2096 PF13276 HTH-like domain ABCAM1_2102 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_2103 PF00085 Thioredoxin ABCAM1_2105 PF02627 Carboxymuconolactone decarboxylase family ABCAM1_2109 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCAM1_2109 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2116 PF13359 DDE superfamily endonuclease ABCAM1_2116 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_2117 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_2117 PF13359 DDE superfamily endonuclease ABCAM1_2122 PF02768 DNA polymerase III beta subunit, C-terminal domain ABCAM1_2122 PF00712 DNA polymerase III beta subunit, N-terminal domain ABCAM1_2122 PF02767 DNA polymerase III beta subunit, central domain ABCAM1_2126 PF00665 Integrase core domain ABCAM1_2126 PF13333 Integrase core domain ABCAM1_2126 PF13276 HTH-like domain ABCAM1_2159 PF07007 Lysozyme inhibitor LprI ABCAM1_2167 PF13737 Transposase DDE domain ABCAM1_2175 PF00330 Aconitase family (aconitate hydratase) ABCAM1_2176 PF01695 IstB-like ATP binding protein ABCAM1_2178 PF01555 DNA methylase ABCAM1_2179 PF00145 C-5 cytosine-specific DNA methylase ABCAM1_2193 PF00929 Exonuclease ABCAM1_2203 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_2204 PF01479 S4 domain ABCAM1_2205 PF00154 recA bacterial DNA recombination protein ABCAM1_2206 PF02631 RecX family ABCAM1_2208 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_2208 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABCAM1_2209 PF07977 FabA-like domain ABCAM1_2210 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_2210 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABCAM1_2212 PF07244 Surface antigen variable number repeat ABCAM1_2212 PF01103 Surface antigen ABCAM1_2213 PF13180 PDZ domain ABCAM1_2213 PF02163 Peptidase family M50 ABCAM1_2213 PF17820 PDZ domain ABCAM1_2214 PF13288 DXP reductoisomerase C-terminal domain ABCAM1_2214 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABCAM1_2214 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABCAM1_2216 PF01255 Putative undecaprenyl diphosphate synthase ABCAM1_2217 PF01765 Ribosome recycling factor ABCAM1_2218 PF00696 Amino acid kinase family ABCAM1_2219 PF18693 TRAM domain ABCAM1_2219 PF00919 Uncharacterized protein family UPF0004 ABCAM1_2219 PF04055 Radical SAM superfamily ABCAM1_2220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_2220 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_2220 PF00989 PAS fold ABCAM1_2221 PF02954 Bacterial regulatory protein, Fis family ABCAM1_2221 PF00158 Sigma-54 interaction domain ABCAM1_2221 PF00072 Response regulator receiver domain ABCAM1_2222 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_2223 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABCAM1_2223 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABCAM1_2225 PF02542 YgbB family ABCAM1_2227 PF01266 FAD dependent oxidoreductase ABCAM1_2229 PF01527 Transposase ABCAM1_2230 PF13276 HTH-like domain ABCAM1_2230 PF13333 Integrase core domain ABCAM1_2230 PF00665 Integrase core domain ABCAM1_2234 PF00206 Lyase ABCAM1_2234 PF10415 Fumarase C C-terminus ABCAM1_2235 PF16363 GDP-mannose 4,6 dehydratase ABCAM1_2236 PF02635 DsrE/DsrF-like family ABCAM1_2240 PF00892 EamA-like transporter family ABCAM1_2241 PF00155 Aminotransferase class I and II ABCAM1_2241 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_2242 PF01638 HxlR-like helix-turn-helix ABCAM1_2243 PF03454 MoeA C-terminal region (domain IV) ABCAM1_2243 PF03453 MoeA N-terminal region (domain I and II) ABCAM1_2243 PF00994 Probable molybdopterin binding domain ABCAM1_2244 PF01967 MoaC family ABCAM1_2244 PF00994 Probable molybdopterin binding domain ABCAM1_2245 PF02391 MoaE protein ABCAM1_2247 PF04055 Radical SAM superfamily ABCAM1_2247 PF06463 Molybdenum Cofactor Synthesis C ABCAM1_2248 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCAM1_2248 PF01568 Molydopterin dinucleotide binding domain ABCAM1_2248 PF00384 Molybdopterin oxidoreductase ABCAM1_2249 PF13737 Transposase DDE domain ABCAM1_2250 PF00384 Molybdopterin oxidoreductase ABCAM1_2250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCAM1_2250 PF01568 Molydopterin dinucleotide binding domain ABCAM1_2251 PF12804 MobA-like NTP transferase domain ABCAM1_2252 PF00384 Molybdopterin oxidoreductase ABCAM1_2252 PF01568 Molydopterin dinucleotide binding domain ABCAM1_2252 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCAM1_2252 PF04324 BFD-like [2Fe-2S] binding domain ABCAM1_2253 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCAM1_2253 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2253 PF04324 BFD-like [2Fe-2S] binding domain ABCAM1_2253 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCAM1_2253 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABCAM1_2254 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCAM1_2254 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABCAM1_2254 PF13806 Rieske-like [2Fe-2S] domain ABCAM1_2254 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2254 PF04324 BFD-like [2Fe-2S] binding domain ABCAM1_2254 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCAM1_2256 PF00072 Response regulator receiver domain ABCAM1_2256 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_2257 PF00005 ABC transporter ABCAM1_2258 PF11799 impB/mucB/samB family C-terminal domain ABCAM1_2258 PF00817 impB/mucB/samB family ABCAM1_2258 PF13438 Domain of unknown function (DUF4113) ABCAM1_2259 PF01220 Dehydroquinase class II ABCAM1_2260 PF00364 Biotin-requiring enzyme ABCAM1_2261 PF02785 Biotin carboxylase C-terminal domain ABCAM1_2261 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCAM1_2261 PF00289 Biotin carboxylase, N-terminal domain ABCAM1_2263 PF12832 MFS_1 like family ABCAM1_2266 PF00665 Integrase core domain ABCAM1_2266 PF13333 Integrase core domain ABCAM1_2266 PF13276 HTH-like domain ABCAM1_2269 PF00717 Peptidase S24-like ABCAM1_2270 PF11799 impB/mucB/samB family C-terminal domain ABCAM1_2270 PF00817 impB/mucB/samB family ABCAM1_2270 PF13438 Domain of unknown function (DUF4113) ABCAM1_2282 PF00665 Integrase core domain ABCAM1_2282 PF13333 Integrase core domain ABCAM1_2282 PF13276 HTH-like domain ABCAM1_2290 PF00712 DNA polymerase III beta subunit, N-terminal domain ABCAM1_2290 PF02768 DNA polymerase III beta subunit, C-terminal domain ABCAM1_2290 PF02767 DNA polymerase III beta subunit, central domain ABCAM1_2295 PF13276 HTH-like domain ABCAM1_2295 PF00665 Integrase core domain ABCAM1_2295 PF13333 Integrase core domain ABCAM1_2299 PF13333 Integrase core domain ABCAM1_2299 PF00665 Integrase core domain ABCAM1_2299 PF13276 HTH-like domain ABCAM1_2305 PF01645 Conserved region in glutamate synthase ABCAM1_2308 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABCAM1_2308 PF01565 FAD binding domain ABCAM1_2309 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABCAM1_2311 PF00465 Iron-containing alcohol dehydrogenase ABCAM1_2312 PF03061 Thioesterase superfamily ABCAM1_2313 PF04185 Phosphoesterase family ABCAM1_2313 PF05506 Domain of unknown function (DUF756) ABCAM1_2315 PF12169 DNA polymerase III subunits gamma and tau domain III ABCAM1_2315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABCAM1_2315 PF12170 DNA polymerase III tau subunit V interacting with alpha ABCAM1_2316 PF07690 Major Facilitator Superfamily ABCAM1_2321 PF00108 Thiolase, N-terminal domain ABCAM1_2321 PF02803 Thiolase, C-terminal domain ABCAM1_2323 PF03466 LysR substrate binding domain ABCAM1_2323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2326 PF01037 Lrp/AsnC ligand binding domain ABCAM1_2327 PF03594 Benzoate membrane transport protein ABCAM1_2328 PF02308 MgtC family ABCAM1_2330 PF00689 Cation transporting ATPase, C-terminus ABCAM1_2330 PF00690 Cation transporter/ATPase, N-terminus ABCAM1_2335 PF00582 Universal stress protein family ABCAM1_2336 PF12848 ABC transporter ABCAM1_2336 PF00005 ABC transporter ABCAM1_2340 PF00593 TonB dependent receptor ABCAM1_2340 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_2345 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_2347 PF00924 Mechanosensitive ion channel ABCAM1_2348 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_2348 PF00593 TonB dependent receptor ABCAM1_2349 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_2351 PF01037 Lrp/AsnC ligand binding domain ABCAM1_2352 PF01817 Chorismate mutase type II ABCAM1_2357 PF00577 Outer membrane usher protein ABCAM1_2357 PF13953 PapC C-terminal domain ABCAM1_2357 PF13954 PapC N-terminal domain ABCAM1_2359 PF13737 Transposase DDE domain ABCAM1_2361 PF01433 Peptidase family M1 domain ABCAM1_2361 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABCAM1_2361 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABCAM1_2364 PF02110 Hydroxyethylthiazole kinase family ABCAM1_2365 PF12833 Helix-turn-helix domain ABCAM1_2365 PF06445 GyrI-like small molecule binding domain ABCAM1_2367 PF14493 Helix-turn-helix domain ABCAM1_2367 PF05970 PIF1-like helicase ABCAM1_2368 PF00465 Iron-containing alcohol dehydrogenase ABCAM1_2371 PF00171 Aldehyde dehydrogenase family ABCAM1_2372 PF13520 Amino acid permease ABCAM1_2373 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABCAM1_2374 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABCAM1_2375 PF02540 NAD synthase ABCAM1_2375 PF00958 GMP synthase C terminal domain ABCAM1_2375 PF00117 Glutamine amidotransferase class-I ABCAM1_2376 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCAM1_2376 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABCAM1_2377 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABCAM1_2380 PF00881 Nitroreductase family ABCAM1_2382 PF17209 Hfq protein ABCAM1_2384 PF01119 DNA mismatch repair protein, C-terminal domain ABCAM1_2384 PF08676 MutL C terminal dimerisation domain ABCAM1_2385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABCAM1_2386 PF01479 S4 domain ABCAM1_2386 PF00849 RNA pseudouridylate synthase ABCAM1_2389 PF01479 S4 domain ABCAM1_2389 PF00849 RNA pseudouridylate synthase ABCAM1_2391 PF04284 Protein of unknown function (DUF441) ABCAM1_2392 PF03466 LysR substrate binding domain ABCAM1_2392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2395 PF07690 Major Facilitator Superfamily ABCAM1_2396 PF00027 Cyclic nucleotide-binding domain ABCAM1_2396 PF00520 Ion transport protein ABCAM1_2398 PF11791 Aconitate B N-terminal domain ABCAM1_2398 PF00330 Aconitase family (aconitate hydratase) ABCAM1_2398 PF06434 Aconitate hydratase 2 N-terminus ABCAM1_2401 PF17243 POTRA domain TamA domain 1 ABCAM1_2401 PF07244 Surface antigen variable number repeat ABCAM1_2401 PF01103 Surface antigen ABCAM1_2402 PF07690 Major Facilitator Superfamily ABCAM1_2403 PF03232 Ubiquinone biosynthesis protein COQ7 ABCAM1_2405 PF00120 Glutamine synthetase, catalytic domain ABCAM1_2406 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_2406 PF00072 Response regulator receiver domain ABCAM1_2407 PF13493 Domain of unknown function (DUF4118) ABCAM1_2407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_2407 PF02702 Osmosensitive K+ channel His kinase sensor domain ABCAM1_2407 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_2408 PF02669 K+-transporting ATPase, c chain ABCAM1_2410 PF03814 Potassium-transporting ATPase A subunit ABCAM1_2414 PF03109 ABC1 family ABCAM1_2415 PF00899 ThiF family ABCAM1_2416 PF01613 Flavin reductase like domain ABCAM1_2417 PF00501 AMP-binding enzyme ABCAM1_2417 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_2418 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_2418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_2418 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_2419 PF00106 short chain dehydrogenase ABCAM1_2420 PF12833 Helix-turn-helix domain ABCAM1_2421 PF09084 NMT1/THI5 like ABCAM1_2422 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2423 PF17827 PrmC N-terminal domain ABCAM1_2423 PF13847 Methyltransferase domain ABCAM1_2424 PF00472 RF-1 domain ABCAM1_2424 PF03462 PCRF domain ABCAM1_2426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2426 PF03466 LysR substrate binding domain ABCAM1_2429 PF00296 Luciferase-like monooxygenase ABCAM1_2431 PF13994 PgaD-like protein ABCAM1_2432 PF00535 Glycosyl transferase family 2 ABCAM1_2433 PF14883 Hypothetical glycosyl hydrolase family 13 ABCAM1_2433 PF01522 Polysaccharide deacetylase ABCAM1_2435 PF03618 Kinase/pyrophosphorylase ABCAM1_2436 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABCAM1_2436 PF02896 PEP-utilising enzyme, TIM barrel domain ABCAM1_2436 PF00391 PEP-utilising enzyme, mobile domain ABCAM1_2438 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABCAM1_2438 PF06481 COX Aromatic Rich Motif ABCAM1_2439 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABCAM1_2440 PF00510 Cytochrome c oxidase subunit III ABCAM1_2441 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABCAM1_2442 PF01040 UbiA prenyltransferase family ABCAM1_2443 PF01250 Ribosomal protein S6 ABCAM1_2444 PF01084 Ribosomal protein S18 ABCAM1_2445 PF01281 Ribosomal protein L9, N-terminal domain ABCAM1_2445 PF03948 Ribosomal protein L9, C-terminal domain ABCAM1_2446 PF00772 DnaB-like helicase N terminal domain ABCAM1_2446 PF03796 DnaB-like helicase C terminal domain ABCAM1_2447 PF01168 Alanine racemase, N-terminal domain ABCAM1_2447 PF00842 Alanine racemase, C-terminal domain ABCAM1_2449 PF01841 Transglutaminase-like superfamily ABCAM1_2449 PF08379 Bacterial transglutaminase-like N-terminal region ABCAM1_2451 PF14403 Circularly permuted ATP-grasp type 2 ABCAM1_2453 PF01134 Glucose inhibited division protein A ABCAM1_2453 PF13932 GidA associated domain ABCAM1_2457 PF02954 Bacterial regulatory protein, Fis family ABCAM1_2458 PF01808 AICARFT/IMPCHase bienzyme ABCAM1_2458 PF02142 MGS-like domain ABCAM1_2459 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABCAM1_2459 PF02843 Phosphoribosylglycinamide synthetase, C domain ABCAM1_2459 PF02844 Phosphoribosylglycinamide synthetase, N domain ABCAM1_2460 PF03180 NLPA lipoprotein ABCAM1_2461 PF09383 NIL domain ABCAM1_2461 PF00005 ABC transporter ABCAM1_2462 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2463 PF00753 Metallo-beta-lactamase superfamily ABCAM1_2463 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABCAM1_2465 PF00375 Sodium:dicarboxylate symporter family ABCAM1_2470 PF07995 Glucose / Sorbosone dehydrogenase ABCAM1_2471 PF00892 EamA-like transporter family ABCAM1_2472 PF01177 Asp/Glu/Hydantoin racemase ABCAM1_2473 PF00085 Thioredoxin ABCAM1_2473 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2476 PF02470 MlaD protein ABCAM1_2477 PF04403 Paraquat-inducible protein A ABCAM1_2481 PF08946 Osmosensory transporter coiled coil ABCAM1_2481 PF00083 Sugar (and other) transporter ABCAM1_2486 PF13737 Transposase DDE domain ABCAM1_2489 PF13737 Transposase DDE domain ABCAM1_2493 PF07729 FCD domain ABCAM1_2493 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_2495 PF03616 Sodium/glutamate symporter ABCAM1_2496 PF00561 alpha/beta hydrolase fold ABCAM1_2501 PF04076 Bacterial OB fold (BOF) protein ABCAM1_2505 PF13737 Transposase DDE domain ABCAM1_2507 PF00171 Aldehyde dehydrogenase family ABCAM1_2508 PF00202 Aminotransferase class-III ABCAM1_2509 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2509 PF03466 LysR substrate binding domain ABCAM1_2510 PF00069 Protein kinase domain ABCAM1_2515 PF00814 Glycoprotease family ABCAM1_2516 PF01165 Ribosomal protein S21 ABCAM1_2517 PF09424 Yqey-like protein ABCAM1_2518 PF01435 Peptidase family M48 ABCAM1_2519 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCAM1_2519 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCAM1_2522 PF00156 Phosphoribosyl transferase domain ABCAM1_2523 PF02674 Colicin V production protein ABCAM1_2524 PF01180 Dihydroorotate dehydrogenase ABCAM1_2528 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABCAM1_2528 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABCAM1_2529 PF00881 Nitroreductase family ABCAM1_2532 PF00313 'Cold-shock' DNA-binding domain ABCAM1_2534 PF00140 Sigma-70 factor, region 1.2 ABCAM1_2534 PF04545 Sigma-70, region 4 ABCAM1_2534 PF04542 Sigma-70 region 2 ABCAM1_2535 PF04241 Protein of unknown function (DUF423) ABCAM1_2537 PF05690 Thiazole biosynthesis protein ThiG ABCAM1_2539 PF03883 Peroxide stress protein YaaA ABCAM1_2541 PF00753 Metallo-beta-lactamase superfamily ABCAM1_2542 PF07687 Peptidase dimerisation domain ABCAM1_2542 PF01546 Peptidase family M20/M25/M40 ABCAM1_2544 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABCAM1_2545 PF01842 ACT domain ABCAM1_2545 PF00800 Prephenate dehydratase ABCAM1_2545 PF01817 Chorismate mutase type II ABCAM1_2547 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_2547 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_2547 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_2548 PF00375 Sodium:dicarboxylate symporter family ABCAM1_2549 PF02885 Glycosyl transferase family, helical bundle domain ABCAM1_2549 PF00591 Glycosyl transferase family, a/b domain ABCAM1_2550 PF07023 Protein of unknown function (DUF1315) ABCAM1_2551 PF01513 ATP-NAD kinase ABCAM1_2555 PF00293 NUDIX domain ABCAM1_2557 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_2557 PF08521 Two-component sensor kinase N-terminal ABCAM1_2557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_2558 PF00072 Response regulator receiver domain ABCAM1_2558 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_2560 PF00437 Type II/IV secretion system protein ABCAM1_2562 PF01980 tRNA-methyltransferase O ABCAM1_2562 PF18389 TrmO C-terminal domain ABCAM1_2563 PF00970 Oxidoreductase FAD-binding domain ABCAM1_2563 PF00175 Oxidoreductase NAD-binding domain ABCAM1_2564 PF02567 Phenazine biosynthesis-like protein ABCAM1_2565 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_2565 PF00155 Aminotransferase class I and II ABCAM1_2567 PF00037 4Fe-4S binding domain ABCAM1_2568 PF00893 Small Multidrug Resistance protein ABCAM1_2569 PF03466 LysR substrate binding domain ABCAM1_2569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2570 PF13533 Biotin-lipoyl like ABCAM1_2571 PF00873 AcrB/AcrD/AcrF family ABCAM1_2572 PF02321 Outer membrane efflux protein ABCAM1_2573 PF00464 Serine hydroxymethyltransferase ABCAM1_2577 PF00005 ABC transporter ABCAM1_2578 PF01061 ABC-2 type transporter ABCAM1_2579 PF14489 QueF-like protein ABCAM1_2579 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABCAM1_2581 PF01098 Cell cycle protein ABCAM1_2582 PF13406 Transglycosylase SLT domain ABCAM1_2583 PF05036 Sporulation related domain ABCAM1_2583 PF03330 Lytic transglycolase ABCAM1_2587 PF12833 Helix-turn-helix domain ABCAM1_2589 PF00889 Elongation factor TS ABCAM1_2590 PF00318 Ribosomal protein S2 ABCAM1_2591 PF00557 Metallopeptidase family M24 ABCAM1_2592 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_2594 PF07690 Major Facilitator Superfamily ABCAM1_2597 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCAM1_2597 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2598 PF04055 Radical SAM superfamily ABCAM1_2603 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABCAM1_2603 PF05221 S-adenosyl-L-homocysteine hydrolase ABCAM1_2604 PF02219 Methylenetetrahydrofolate reductase ABCAM1_2605 PF04452 RNA methyltransferase ABCAM1_2606 PF00563 EAL domain ABCAM1_2606 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_2606 PF03707 Bacterial signalling protein N terminal repeat ABCAM1_2607 PF00390 Malic enzyme, N-terminal domain ABCAM1_2607 PF01515 Phosphate acetyl/butaryl transferase ABCAM1_2607 PF03949 Malic enzyme, NAD binding domain ABCAM1_2608 PF01743 Poly A polymerase head domain ABCAM1_2608 PF12627 Probable RNA and SrmB- binding site of polymerase A ABCAM1_2609 PF13180 PDZ domain ABCAM1_2610 PF01784 NIF3 (NGG1p interacting factor 3) ABCAM1_2611 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABCAM1_2611 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABCAM1_2618 PF04345 Chorismate lyase ABCAM1_2624 PF13539 D-alanyl-D-alanine carboxypeptidase ABCAM1_2627 PF00117 Glutamine amidotransferase class-I ABCAM1_2628 PF01433 Peptidase family M1 domain ABCAM1_2628 PF11838 ERAP1-like C-terminal domain ABCAM1_2629 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_2629 PF00593 TonB dependent receptor ABCAM1_2630 PF00591 Glycosyl transferase family, a/b domain ABCAM1_2630 PF02885 Glycosyl transferase family, helical bundle domain ABCAM1_2631 PF00218 Indole-3-glycerol phosphate synthase ABCAM1_2634 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABCAM1_2634 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABCAM1_2635 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_2635 PF01799 [2Fe-2S] binding domain ABCAM1_2637 PF00144 Beta-lactamase ABCAM1_2640 PF05675 Protein of unknown function (DUF817) ABCAM1_2641 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABCAM1_2644 PF00425 chorismate binding enzyme ABCAM1_2647 PF00975 Thioesterase domain ABCAM1_2648 PF00005 ABC transporter ABCAM1_2648 PF00664 ABC transporter transmembrane region ABCAM1_2649 PF00005 ABC transporter ABCAM1_2649 PF00664 ABC transporter transmembrane region ABCAM1_2651 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABCAM1_2652 PF00550 Phosphopantetheine attachment site ABCAM1_2652 PF00857 Isochorismatase family ABCAM1_2653 PF00501 AMP-binding enzyme ABCAM1_2653 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_2654 PF00668 Condensation domain ABCAM1_2654 PF00501 AMP-binding enzyme ABCAM1_2654 PF00550 Phosphopantetheine attachment site ABCAM1_2655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABCAM1_2656 PF00593 TonB dependent receptor ABCAM1_2656 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_2657 PF01497 Periplasmic binding protein ABCAM1_2658 PF00005 ABC transporter ABCAM1_2659 PF01032 FecCD transport family ABCAM1_2660 PF01032 FecCD transport family ABCAM1_2663 PF00975 Thioesterase domain ABCAM1_2663 PF00550 Phosphopantetheine attachment site ABCAM1_2663 PF00668 Condensation domain ABCAM1_2663 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_2663 PF00501 AMP-binding enzyme ABCAM1_2664 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_2664 PF00501 AMP-binding enzyme ABCAM1_2664 PF00668 Condensation domain ABCAM1_2666 PF08348 YheO-like PAS domain ABCAM1_2666 PF13309 HTH domain ABCAM1_2667 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_2668 PF17954 Quercetinase C-terminal cupin domain ABCAM1_2668 PF02678 Pirin ABCAM1_2672 PF13359 DDE superfamily endonuclease ABCAM1_2672 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_2673 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_2673 PF13359 DDE superfamily endonuclease ABCAM1_2675 PF13737 Transposase DDE domain ABCAM1_2679 PF13333 Integrase core domain ABCAM1_2679 PF00665 Integrase core domain ABCAM1_2679 PF13276 HTH-like domain ABCAM1_2685 PF02796 Helix-turn-helix domain of resolvase ABCAM1_2685 PF00239 Resolvase, N terminal domain ABCAM1_2688 PF13737 Transposase DDE domain ABCAM1_2693 PF13356 Arm DNA-binding domain ABCAM1_2693 PF00589 Phage integrase family ABCAM1_2694 PF04328 Selenoprotein, putative ABCAM1_2695 PF13722 5TM C-terminal transporter carbon starvation CstA ABCAM1_2695 PF02554 Carbon starvation protein CstA ABCAM1_2696 PF01132 Elongation factor P (EF-P) OB domain ABCAM1_2696 PF08207 Elongation factor P (EF-P) KOW-like domain ABCAM1_2696 PF09285 Elongation factor P, C-terminal ABCAM1_2697 PF04055 Radical SAM superfamily ABCAM1_2699 PF12792 CSS motif domain associated with EAL ABCAM1_2699 PF00563 EAL domain ABCAM1_2700 PF01197 Ribosomal protein L31 ABCAM1_2701 PF13593 SBF-like CPA transporter family (DUF4137) ABCAM1_2702 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCAM1_2703 PF07690 Major Facilitator Superfamily ABCAM1_2704 PF05362 Lon protease (S16) C-terminal proteolytic domain ABCAM1_2704 PF13654 AAA domain ABCAM1_2705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2705 PF03466 LysR substrate binding domain ABCAM1_2706 PF01476 LysM domain ABCAM1_2706 PF01551 Peptidase family M23 ABCAM1_2707 PF01975 Survival protein SurE ABCAM1_2710 PF00768 D-alanyl-D-alanine carboxypeptidase ABCAM1_2710 PF07943 Penicillin-binding protein 5, C-terminal domain ABCAM1_2711 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_2712 PF13344 Haloacid dehalogenase-like hydrolase ABCAM1_2712 PF00293 NUDIX domain ABCAM1_2718 PF08496 Peptidase family S49 N-terminal ABCAM1_2718 PF01343 Peptidase family S49 ABCAM1_2719 PF00005 ABC transporter ABCAM1_2720 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2721 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2722 PF12849 PBP superfamily domain ABCAM1_2723 PF00324 Amino acid permease ABCAM1_2724 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABCAM1_2724 PF00205 Thiamine pyrophosphate enzyme, central domain ABCAM1_2724 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABCAM1_2725 PF01037 Lrp/AsnC ligand binding domain ABCAM1_2726 PF00171 Aldehyde dehydrogenase family ABCAM1_2727 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABCAM1_2728 PF00202 Aminotransferase class-III ABCAM1_2731 PF02525 Flavodoxin-like fold ABCAM1_2732 PF00487 Fatty acid desaturase ABCAM1_2733 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCAM1_2733 PF00175 Oxidoreductase NAD-binding domain ABCAM1_2733 PF00970 Oxidoreductase FAD-binding domain ABCAM1_2734 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_2736 PF00271 Helicase conserved C-terminal domain ABCAM1_2736 PF00176 SNF2 family N-terminal domain ABCAM1_2736 PF18339 RapA N-terminal Tudor like domain 1 ABCAM1_2736 PF12137 RNA polymerase recycling family C-terminal ABCAM1_2736 PF18337 RapA N-terminal Tudor like domain ABCAM1_2739 PF00202 Aminotransferase class-III ABCAM1_2740 PF02581 Thiamine monophosphate synthase ABCAM1_2745 PF05193 Peptidase M16 inactive domain ABCAM1_2745 PF00675 Insulinase (Peptidase family M16) ABCAM1_2746 PF02567 Phenazine biosynthesis-like protein ABCAM1_2748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2748 PF03466 LysR substrate binding domain ABCAM1_2749 PF06779 Uncharacterised MFS-type transporter YbfB ABCAM1_2752 PF00180 Isocitrate/isopropylmalate dehydrogenase ABCAM1_2753 PF00849 RNA pseudouridylate synthase ABCAM1_2754 PF03971 Monomeric isocitrate dehydrogenase ABCAM1_2756 PF00768 D-alanyl-D-alanine carboxypeptidase ABCAM1_2756 PF07943 Penicillin-binding protein 5, C-terminal domain ABCAM1_2757 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2758 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCAM1_2759 PF00875 DNA photolyase ABCAM1_2759 PF03441 FAD binding domain of DNA photolyase ABCAM1_2763 PF00665 Integrase core domain ABCAM1_2763 PF13276 HTH-like domain ABCAM1_2763 PF13333 Integrase core domain ABCAM1_2767 PF02350 UDP-N-acetylglucosamine 2-epimerase ABCAM1_2770 PF03060 Nitronate monooxygenase ABCAM1_2771 PF01207 Dihydrouridine synthase (Dus) ABCAM1_2772 PF07759 Protein of unknown function (DUF1615) ABCAM1_2774 PF00696 Amino acid kinase family ABCAM1_2774 PF01472 PUA domain ABCAM1_2775 PF01926 50S ribosome-binding GTPase ABCAM1_2775 PF01018 GTP1/OBG ABCAM1_2778 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABCAM1_2778 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABCAM1_2779 PF00892 EamA-like transporter family ABCAM1_2781 PF17757 UvrB interaction domain ABCAM1_2781 PF12344 Ultra-violet resistance protein B ABCAM1_2781 PF02151 UvrB/uvrC motif ABCAM1_2781 PF04851 Type III restriction enzyme, res subunit ABCAM1_2781 PF00271 Helicase conserved C-terminal domain ABCAM1_2783 PF17151 Periplasmic sensor domain ABCAM1_2783 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_2789 PF00106 short chain dehydrogenase ABCAM1_2790 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABCAM1_2793 PF11967 Recombination protein O N terminal ABCAM1_2793 PF02565 Recombination protein O C terminal ABCAM1_2795 PF07650 KH domain ABCAM1_2795 PF01926 50S ribosome-binding GTPase ABCAM1_2796 PF14622 Ribonuclease-III-like ABCAM1_2796 PF00035 Double-stranded RNA binding motif ABCAM1_2798 PF10502 Signal peptidase, peptidase S26 ABCAM1_2799 PF00679 Elongation factor G C-terminus ABCAM1_2799 PF00009 Elongation factor Tu GTP binding domain ABCAM1_2799 PF03144 Elongation factor Tu domain 2 ABCAM1_2799 PF06421 GTP-binding protein LepA C-terminus ABCAM1_2801 PF13180 PDZ domain ABCAM1_2802 PF02910 Fumarate reductase flavoprotein C-term ABCAM1_2802 PF00890 FAD binding domain ABCAM1_2804 PF02223 Thymidylate kinase ABCAM1_2805 PF02618 YceG-like family ABCAM1_2806 PF01063 Amino-transferase class IV ABCAM1_2809 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2810 PF00528 Binding-protein-dependent transport system inner membrane component ABCAM1_2811 PF00005 ABC transporter ABCAM1_2811 PF12857 TOBE-like domain ABCAM1_2812 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2812 PF03466 LysR substrate binding domain ABCAM1_2814 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_2814 PF14602 Hexapeptide repeat of succinyl-transferase ABCAM1_2814 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABCAM1_2816 PF06508 Queuosine biosynthesis protein QueC ABCAM1_2819 PF00578 AhpC/TSA family ABCAM1_2821 PF00293 NUDIX domain ABCAM1_2821 PF01467 Cytidylyltransferase-like ABCAM1_2822 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_2823 PF01784 NIF3 (NGG1p interacting factor 3) ABCAM1_2825 PF07690 Major Facilitator Superfamily ABCAM1_2826 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABCAM1_2826 PF02769 AIR synthase related protein, C-terminal domain ABCAM1_2826 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABCAM1_2827 PF01966 HD domain ABCAM1_2828 PF01330 RuvA N terminal domain ABCAM1_2828 PF07499 RuvA, C-terminal domain ABCAM1_2829 PF17864 RuvB AAA lid domain ABCAM1_2829 PF05491 RuvB C-terminal winged helix domain ABCAM1_2829 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABCAM1_2830 PF07687 Peptidase dimerisation domain ABCAM1_2830 PF01546 Peptidase family M20/M25/M40 ABCAM1_2831 PF03061 Thioesterase superfamily ABCAM1_2832 PF01618 MotA/TolQ/ExbB proton channel family ABCAM1_2833 PF02472 Biopolymer transport protein ExbD/TolR ABCAM1_2835 PF07676 WD40-like Beta Propeller Repeat ABCAM1_2835 PF04052 TolB amino-terminal domain ABCAM1_2836 PF00691 OmpA family ABCAM1_2838 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABCAM1_2839 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABCAM1_2839 PF00588 SpoU rRNA Methylase family ABCAM1_2843 PF11638 DnaA N-terminal domain ABCAM1_2843 PF08299 Bacterial dnaA protein helix-turn-helix ABCAM1_2843 PF00308 Bacterial dnaA protein ABCAM1_2844 PF01594 AI-2E family transporter ABCAM1_2845 PF02769 AIR synthase related protein, C-terminal domain ABCAM1_2845 PF00586 AIR synthase related protein, N-terminal domain ABCAM1_2846 PF00551 Formyl transferase ABCAM1_2847 PF12697 Alpha/beta hydrolase family ABCAM1_2848 PF06965 Na+/H+ antiporter 1 ABCAM1_2848 PF01343 Peptidase family S49 ABCAM1_2850 PF13567 Domain of unknown function (DUF4131) ABCAM1_2850 PF03772 Competence protein ABCAM1_2850 PF00753 Metallo-beta-lactamase superfamily ABCAM1_2851 PF00005 ABC transporter ABCAM1_2852 PF02687 FtsX-like permease family ABCAM1_2852 PF12704 MacB-like periplasmic core domain ABCAM1_2854 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABCAM1_2857 PF00266 Aminotransferase class-V ABCAM1_2859 PF13533 Biotin-lipoyl like ABCAM1_2864 PF00535 Glycosyl transferase family 2 ABCAM1_2867 PF00521 DNA gyrase/topoisomerase IV, subunit A ABCAM1_2867 PF03989 DNA gyrase C-terminal domain, beta-propeller ABCAM1_2868 PF01012 Electron transfer flavoprotein domain ABCAM1_2868 PF00766 Electron transfer flavoprotein FAD-binding domain ABCAM1_2869 PF01012 Electron transfer flavoprotein domain ABCAM1_2870 PF02899 Phage integrase, N-terminal SAM-like domain ABCAM1_2870 PF00589 Phage integrase family ABCAM1_2871 PF01810 LysE type translocator ABCAM1_2872 PF01678 Diaminopimelate epimerase ABCAM1_2873 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABCAM1_2873 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABCAM1_2875 PF00324 Amino acid permease ABCAM1_2876 PF18073 Rubredoxin metal binding domain ABCAM1_2878 PF00152 tRNA synthetases class II (D, K and N) ABCAM1_2879 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCAM1_2879 PF11890 Domain of unknown function (DUF3410) ABCAM1_2879 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCAM1_2880 PF06803 Protein of unknown function (DUF1232) ABCAM1_2881 PF02634 FdhD/NarQ family ABCAM1_2882 PF00384 Molybdopterin oxidoreductase ABCAM1_2887 PF00881 Nitroreductase family ABCAM1_2891 PF13737 Transposase DDE domain ABCAM1_2892 PF00975 Thioesterase domain ABCAM1_2892 PF00550 Phosphopantetheine attachment site ABCAM1_2892 PF00668 Condensation domain ABCAM1_2892 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_2892 PF00501 AMP-binding enzyme ABCAM1_2894 PF01272 Transcription elongation factor, GreA/GreB, C-term ABCAM1_2894 PF03449 Transcription elongation factor, N-terminal ABCAM1_2895 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABCAM1_2895 PF01464 Transglycosylase SLT domain ABCAM1_2897 PF01171 PP-loop family ABCAM1_2898 PF01464 Transglycosylase SLT domain ABCAM1_2899 PF01435 Peptidase family M48 ABCAM1_2901 PF00873 AcrB/AcrD/AcrF family ABCAM1_2902 PF03009 Glycerophosphoryl diester phosphodiesterase family ABCAM1_2903 PF00753 Metallo-beta-lactamase superfamily ABCAM1_2904 PF01219 Prokaryotic diacylglycerol kinase ABCAM1_2905 PF00118 TCP-1/cpn60 chaperonin family ABCAM1_2906 PF00166 Chaperonin 10 Kd subunit ABCAM1_2908 PF00781 Diacylglycerol kinase catalytic domain ABCAM1_2909 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABCAM1_2909 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABCAM1_2910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABCAM1_2910 PF01266 FAD dependent oxidoreductase ABCAM1_2911 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABCAM1_2911 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABCAM1_2912 PF00083 Sugar (and other) transporter ABCAM1_2915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABCAM1_2915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABCAM1_2916 PF16655 PhoD-like phosphatase, N-terminal domain ABCAM1_2916 PF09423 PhoD-like phosphatase ABCAM1_2919 PF00809 Pterin binding enzyme ABCAM1_2920 PF06480 FtsH Extracellular ABCAM1_2920 PF01434 Peptidase family M41 ABCAM1_2920 PF17862 AAA+ lid domain ABCAM1_2920 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_2921 PF01728 FtsJ-like methyltransferase ABCAM1_2922 PF01985 CRS1 / YhbY (CRM) domain ABCAM1_2925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABCAM1_2925 PF00117 Glutamine amidotransferase class-I ABCAM1_2926 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABCAM1_2926 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCAM1_2926 PF02142 MGS-like domain ABCAM1_2927 PF01272 Transcription elongation factor, GreA/GreB, C-term ABCAM1_2927 PF03449 Transcription elongation factor, N-terminal ABCAM1_2928 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_2929 PF01042 Endoribonuclease L-PSP ABCAM1_2930 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_2931 PF00582 Universal stress protein family ABCAM1_2932 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABCAM1_2934 PF09587 Bacterial capsule synthesis protein PGA_cap ABCAM1_2939 PF04228 Putative neutral zinc metallopeptidase ABCAM1_2940 PF05661 Protein of unknown function (DUF808) ABCAM1_2941 PF00579 tRNA synthetases class I (W and Y) ABCAM1_2942 PF00549 CoA-ligase ABCAM1_2942 PF02629 CoA binding domain ABCAM1_2943 PF00549 CoA-ligase ABCAM1_2943 PF08442 ATP-grasp domain ABCAM1_2944 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_2944 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCAM1_2945 PF02817 e3 binding domain ABCAM1_2945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABCAM1_2945 PF00364 Biotin-requiring enzyme ABCAM1_2946 PF00676 Dehydrogenase E1 component ABCAM1_2946 PF16078 2-oxoglutarate dehydrogenase N-terminus ABCAM1_2946 PF16870 2-oxoglutarate dehydrogenase C-terminal ABCAM1_2946 PF02779 Transketolase, pyrimidine binding domain ABCAM1_2947 PF13085 2Fe-2S iron-sulfur cluster binding domain ABCAM1_2948 PF02910 Fumarate reductase flavoprotein C-term ABCAM1_2948 PF00890 FAD binding domain ABCAM1_2949 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABCAM1_2950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABCAM1_2951 PF00285 Citrate synthase, C-terminal domain ABCAM1_2956 PF04542 Sigma-70 region 2 ABCAM1_2956 PF03979 Sigma-70 factor, region 1.1 ABCAM1_2956 PF00140 Sigma-70 factor, region 1.2 ABCAM1_2956 PF04546 Sigma-70, non-essential region ABCAM1_2956 PF04539 Sigma-70 region 3 ABCAM1_2956 PF04545 Sigma-70, region 4 ABCAM1_2957 PF04359 Protein of unknown function (DUF493) ABCAM1_2958 PF03099 Biotin/lipoate A/B protein ligase family ABCAM1_2960 PF00465 Iron-containing alcohol dehydrogenase ABCAM1_2961 PF13520 Amino acid permease ABCAM1_2962 PF03358 NADPH-dependent FMN reductase ABCAM1_2963 PF01638 HxlR-like helix-turn-helix ABCAM1_2964 PF00588 SpoU rRNA Methylase family ABCAM1_2965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABCAM1_2965 PF14824 Sirohaem biosynthesis protein central ABCAM1_2965 PF10414 Sirohaem synthase dimerisation region ABCAM1_2966 PF02403 Seryl-tRNA synthetase N-terminal domain ABCAM1_2966 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCAM1_2968 PF03548 Outer membrane lipoprotein carrier protein LolA ABCAM1_2969 PF01016 Ribosomal L27 protein ABCAM1_2970 PF00829 Ribosomal prokaryotic L21 protein ABCAM1_2971 PF00348 Polyprenyl synthetase ABCAM1_2973 PF01569 PAP2 superfamily ABCAM1_2974 PF00529 HlyD membrane-fusion protein of T1SS ABCAM1_2974 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_2975 PF00873 AcrB/AcrD/AcrF family ABCAM1_2976 PF02321 Outer membrane efflux protein ABCAM1_2977 PF01906 Putative heavy-metal-binding ABCAM1_2978 PF01906 Putative heavy-metal-binding ABCAM1_2982 PF10458 Valyl tRNA synthetase tRNA binding arm ABCAM1_2982 PF00133 tRNA synthetases class I (I, L, M and V) ABCAM1_2982 PF08264 Anticodon-binding domain of tRNA ABCAM1_2986 PF03466 LysR substrate binding domain ABCAM1_2986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_2987 PF00909 Ammonium Transporter Family ABCAM1_2989 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_2989 PF08521 Two-component sensor kinase N-terminal ABCAM1_2989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_2990 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_2990 PF00072 Response regulator receiver domain ABCAM1_2991 PF08019 Phosphoethanolamine transferase EptA/EptB ABCAM1_2991 PF00884 Sulfatase ABCAM1_2995 PF01734 Patatin-like phospholipase ABCAM1_2997 PF01145 SPFH domain / Band 7 family ABCAM1_2998 PF04237 YjbR ABCAM1_2999 PF00348 Polyprenyl synthetase ABCAM1_3000 PF04303 PrpF protein ABCAM1_3001 PF00324 Amino acid permease ABCAM1_3005 PF13737 Transposase DDE domain ABCAM1_3010 PF01965 DJ-1/PfpI family ABCAM1_3011 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_3011 PF08990 Erythronolide synthase docking ABCAM1_3011 PF09277 Erythronolide synthase, docking ABCAM1_3011 PF16197 Ketoacyl-synthetase C-terminal extension ABCAM1_3011 PF00109 Beta-ketoacyl synthase, N-terminal domain ABCAM1_3011 PF02801 Beta-ketoacyl synthase, C-terminal domain ABCAM1_3011 PF08659 KR domain ABCAM1_3011 PF00550 Phosphopantetheine attachment site ABCAM1_3011 PF14765 Polyketide synthase dehydratase ABCAM1_3011 PF00698 Acyl transferase domain ABCAM1_3012 PF06719 AraC-type transcriptional regulator N-terminus ABCAM1_3012 PF12833 Helix-turn-helix domain ABCAM1_3013 PF02673 Bacitracin resistance protein BacA ABCAM1_3017 PF02525 Flavodoxin-like fold ABCAM1_3022 PF06974 Protein of unknown function (DUF1298) ABCAM1_3022 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABCAM1_3024 PF10150 Ribonuclease E/G family ABCAM1_3024 PF00575 S1 RNA binding domain ABCAM1_3025 PF02545 Maf-like protein ABCAM1_3026 PF04093 rod shape-determining protein MreD ABCAM1_3027 PF04085 rod shape-determining protein MreC ABCAM1_3029 PF02686 Glu-tRNAGln amidotransferase C subunit ABCAM1_3030 PF01425 Amidase ABCAM1_3031 PF02637 GatB domain ABCAM1_3031 PF02934 GatB/GatE catalytic domain ABCAM1_3039 PF01527 Transposase ABCAM1_3040 PF13276 HTH-like domain ABCAM1_3040 PF00665 Integrase core domain ABCAM1_3040 PF13333 Integrase core domain ABCAM1_3042 PF05992 SbmA/BacA-like family ABCAM1_3043 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_3043 PF13291 ACT domain ABCAM1_3044 PF01734 Patatin-like phospholipase ABCAM1_3045 PF01235 Sodium:alanine symporter family ABCAM1_3047 PF00881 Nitroreductase family ABCAM1_3048 PF07690 Major Facilitator Superfamily ABCAM1_3049 PF12805 FUSC-like inner membrane protein yccS ABCAM1_3051 PF00258 Flavodoxin ABCAM1_3051 PF00175 Oxidoreductase NAD-binding domain ABCAM1_3051 PF00667 FAD binding domain ABCAM1_3053 PF03734 L,D-transpeptidase catalytic domain ABCAM1_3053 PF17969 L,D-transpeptidase C-terminal domain ABCAM1_3054 PF04304 Protein of unknown function (DUF454) ABCAM1_3056 PF08085 Entericidin EcnA/B family ABCAM1_3057 PF07687 Peptidase dimerisation domain ABCAM1_3057 PF01546 Peptidase family M20/M25/M40 ABCAM1_3059 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABCAM1_3059 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABCAM1_3060 PF01584 CheW-like domain ABCAM1_3062 PF00072 Response regulator receiver domain ABCAM1_3065 PF00873 AcrB/AcrD/AcrF family ABCAM1_3066 PF03129 Anticodon binding domain ABCAM1_3066 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCAM1_3066 PF04073 Aminoacyl-tRNA editing domain ABCAM1_3067 PF07411 Domain of unknown function (DUF1508) ABCAM1_3068 PF03831 PhnA domain ABCAM1_3068 PF08274 PhnA Zinc-Ribbon ABCAM1_3069 PF04343 Protein of unknown function, DUF488 ABCAM1_3070 PF12697 Alpha/beta hydrolase family ABCAM1_3071 PF00881 Nitroreductase family ABCAM1_3072 PF00296 Luciferase-like monooxygenase ABCAM1_3073 PF00857 Isochorismatase family ABCAM1_3074 PF01042 Endoribonuclease L-PSP ABCAM1_3075 PF01613 Flavin reductase like domain ABCAM1_3076 PF00860 Permease family ABCAM1_3077 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCAM1_3077 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCAM1_3079 PF01571 Aminomethyltransferase folate-binding domain ABCAM1_3080 PF13098 Thioredoxin-like domain ABCAM1_3080 PF10411 Disulfide bond isomerase protein N-terminus ABCAM1_3082 PF03547 Membrane transport protein ABCAM1_3083 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_3084 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_3084 PF00593 TonB dependent receptor ABCAM1_3085 PF02245 Methylpurine-DNA glycosylase (MPG) ABCAM1_3086 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABCAM1_3086 PF06827 Zinc finger found in FPG and IleRS ABCAM1_3086 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABCAM1_3089 PF01741 Large-conductance mechanosensitive channel, MscL ABCAM1_3091 PF13276 HTH-like domain ABCAM1_3091 PF00665 Integrase core domain ABCAM1_3091 PF13333 Integrase core domain ABCAM1_3093 PF00860 Permease family ABCAM1_3094 PF05175 Methyltransferase small domain ABCAM1_3094 PF08468 Methyltransferase small domain N-terminal ABCAM1_3095 PF00324 Amino acid permease ABCAM1_3096 PF01139 tRNA-splicing ligase RtcB ABCAM1_3098 PF00691 OmpA family ABCAM1_3098 PF13505 Outer membrane protein beta-barrel domain ABCAM1_3100 PF00108 Thiolase, N-terminal domain ABCAM1_3100 PF02803 Thiolase, C-terminal domain ABCAM1_3102 PF00893 Small Multidrug Resistance protein ABCAM1_3104 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCAM1_3104 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCAM1_3105 PF01011 PQQ enzyme repeat ABCAM1_3106 PF04966 Carbohydrate-selective porin, OprB family ABCAM1_3109 PF02311 AraC-like ligand binding domain ABCAM1_3109 PF12833 Helix-turn-helix domain ABCAM1_3110 PF00108 Thiolase, N-terminal domain ABCAM1_3110 PF02803 Thiolase, C-terminal domain ABCAM1_3111 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCAM1_3111 PF00378 Enoyl-CoA hydratase/isomerase ABCAM1_3111 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCAM1_3116 PF03006 Haemolysin-III related ABCAM1_3117 PF00083 Sugar (and other) transporter ABCAM1_3117 PF07690 Major Facilitator Superfamily ABCAM1_3119 PF02810 SEC-C motif ABCAM1_3119 PF07517 SecA DEAD-like domain ABCAM1_3119 PF01043 SecA preprotein cross-linking domain ABCAM1_3119 PF07516 SecA Wing and Scaffold domain ABCAM1_3120 PF00578 AhpC/TSA family ABCAM1_3120 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABCAM1_3121 PF00753 Metallo-beta-lactamase superfamily ABCAM1_3124 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_3124 PF08245 Mur ligase middle domain ABCAM1_3125 PF01039 Carboxyl transferase domain ABCAM1_3126 PF00290 Tryptophan synthase alpha chain ABCAM1_3131 PF00291 Pyridoxal-phosphate dependent enzyme ABCAM1_3132 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABCAM1_3133 PF00593 TonB dependent receptor ABCAM1_3133 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_3134 PF01923 Cobalamin adenosyltransferase ABCAM1_3138 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABCAM1_3139 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_3139 PF00072 Response regulator receiver domain ABCAM1_3140 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_3140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3140 PF00672 HAMP domain ABCAM1_3142 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3142 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3142 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCAM1_3142 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3143 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3143 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCAM1_3143 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3143 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3144 PF06146 Phosphate-starvation-inducible E ABCAM1_3148 PF00593 TonB dependent receptor ABCAM1_3148 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_3151 PF00152 tRNA synthetases class II (D, K and N) ABCAM1_3151 PF01336 OB-fold nucleic acid binding domain ABCAM1_3151 PF02938 GAD domain ABCAM1_3154 PF02350 UDP-N-acetylglucosamine 2-epimerase ABCAM1_3157 PF13439 Glycosyltransferase Family 4 ABCAM1_3157 PF00534 Glycosyl transferases group 1 ABCAM1_3158 PF00535 Glycosyl transferase family 2 ABCAM1_3159 PF01522 Polysaccharide deacetylase ABCAM1_3162 PF01063 Amino-transferase class IV ABCAM1_3163 PF03710 Glutamate-ammonia ligase adenylyltransferase ABCAM1_3163 PF08335 GlnD PII-uridylyltransferase ABCAM1_3164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3164 PF07689 KaiB domain ABCAM1_3164 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_3165 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ABCAM1_3172 PF13356 Arm DNA-binding domain ABCAM1_3172 PF00589 Phage integrase family ABCAM1_3173 PF02547 Queuosine biosynthesis protein ABCAM1_3177 PF13737 Transposase DDE domain ABCAM1_3178 PF01702 Queuine tRNA-ribosyltransferase ABCAM1_3179 PF02699 Preprotein translocase subunit ABCAM1_3182 PF02355 Protein export membrane protein ABCAM1_3182 PF07549 SecD/SecF GG Motif ABCAM1_3184 PF13333 Integrase core domain ABCAM1_3184 PF00665 Integrase core domain ABCAM1_3184 PF13276 HTH-like domain ABCAM1_3185 PF02441 Flavoprotein ABCAM1_3185 PF04127 DNA / pantothenate metabolism flavoprotein ABCAM1_3186 PF01527 Transposase ABCAM1_3187 PF00665 Integrase core domain ABCAM1_3187 PF13276 HTH-like domain ABCAM1_3189 PF04002 RadC-like JAB domain ABCAM1_3190 PF01062 Bestrophin, RFP-TM, chloride channel ABCAM1_3191 PF02811 PHP domain ABCAM1_3192 PF04279 Intracellular septation protein A ABCAM1_3193 PF03795 YCII-related domain ABCAM1_3195 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABCAM1_3195 PF01266 FAD dependent oxidoreductase ABCAM1_3197 PF04461 Protein of unknown function (DUF520) ABCAM1_3199 PF03061 Thioesterase superfamily ABCAM1_3200 PF00085 Thioredoxin ABCAM1_3201 PF00561 alpha/beta hydrolase fold ABCAM1_3202 PF04273 Putative phosphatase (DUF442) ABCAM1_3202 PF00753 Metallo-beta-lactamase superfamily ABCAM1_3204 PF13737 Transposase DDE domain ABCAM1_3206 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCAM1_3206 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_3208 PF17152 Periplasmic sensor domain ABCAM1_3208 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_3209 PF00691 OmpA family ABCAM1_3209 PF01389 OmpA-like transmembrane domain ABCAM1_3210 PF00149 Calcineurin-like phosphoesterase ABCAM1_3210 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABCAM1_3211 PF13091 PLD-like domain ABCAM1_3213 PF13167 GTP-binding GTPase N-terminal ABCAM1_3213 PF16360 GTP-binding GTPase Middle Region ABCAM1_3213 PF01926 50S ribosome-binding GTPase ABCAM1_3217 PF00149 Calcineurin-like phosphoesterase ABCAM1_3218 PF00398 Ribosomal RNA adenine dimethylase ABCAM1_3219 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABCAM1_3220 PF00572 Ribosomal protein L13 ABCAM1_3221 PF00380 Ribosomal protein S9/S16 ABCAM1_3222 PF13417 Glutathione S-transferase, N-terminal domain ABCAM1_3222 PF00043 Glutathione S-transferase, C-terminal domain ABCAM1_3223 PF04386 Stringent starvation protein B ABCAM1_3226 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCAM1_3226 PF00364 Biotin-requiring enzyme ABCAM1_3226 PF00289 Biotin carboxylase, N-terminal domain ABCAM1_3226 PF02785 Biotin carboxylase C-terminal domain ABCAM1_3228 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3228 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3228 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3229 PF01039 Carboxyl transferase domain ABCAM1_3232 PF17932 Tetracyclin repressor-like, C-terminal domain ABCAM1_3232 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_3233 PF00872 Transposase, Mutator family ABCAM1_3234 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_3235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3235 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3239 PF01066 CDP-alcohol phosphatidyltransferase ABCAM1_3240 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABCAM1_3244 PF00056 lactate/malate dehydrogenase, NAD binding domain ABCAM1_3244 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABCAM1_3246 PF10145 Phage-related minor tail protein ABCAM1_3246 PF01551 Peptidase family M23 ABCAM1_3246 PF01464 Transglycosylase SLT domain ABCAM1_3247 PF01938 TRAM domain ABCAM1_3247 PF04055 Radical SAM superfamily ABCAM1_3247 PF00919 Uncharacterized protein family UPF0004 ABCAM1_3248 PF02562 PhoH-like protein ABCAM1_3249 PF02130 Uncharacterized protein family UPF0054 ABCAM1_3254 PF03358 NADPH-dependent FMN reductase ABCAM1_3255 PF03631 Virulence factor BrkB ABCAM1_3256 PF00892 EamA-like transporter family ABCAM1_3257 PF12833 Helix-turn-helix domain ABCAM1_3261 PF13359 DDE superfamily endonuclease ABCAM1_3261 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_3262 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCAM1_3262 PF13359 DDE superfamily endonuclease ABCAM1_3263 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCAM1_3266 PF00773 RNB domain ABCAM1_3266 PF17876 Cold shock domain ABCAM1_3266 PF00575 S1 RNA binding domain ABCAM1_3266 PF08461 Ribonuclease R winged-helix domain ABCAM1_3266 PF08206 Ribonuclease B OB domain ABCAM1_3267 PF01432 Peptidase family M3 ABCAM1_3268 PF09526 Probable metal-binding protein (DUF2387) ABCAM1_3271 PF13737 Transposase DDE domain ABCAM1_3274 PF03937 Flavinator of succinate dehydrogenase ABCAM1_3275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3275 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3276 PF00743 Flavin-binding monooxygenase-like ABCAM1_3277 PF01196 Ribosomal protein L17 ABCAM1_3278 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABCAM1_3278 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABCAM1_3278 PF01000 RNA polymerase Rpb3/RpoA insert domain ABCAM1_3279 PF01479 S4 domain ABCAM1_3279 PF00163 Ribosomal protein S4/S9 N-terminal domain ABCAM1_3280 PF00411 Ribosomal protein S11 ABCAM1_3281 PF00416 Ribosomal protein S13/S18 ABCAM1_3283 PF00344 SecY translocase ABCAM1_3284 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABCAM1_3285 PF00327 Ribosomal protein L30p/L7e ABCAM1_3286 PF00333 Ribosomal protein S5, N-terminal domain ABCAM1_3286 PF03719 Ribosomal protein S5, C-terminal domain ABCAM1_3287 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABCAM1_3288 PF00347 Ribosomal protein L6 ABCAM1_3289 PF00410 Ribosomal protein S8 ABCAM1_3290 PF00253 Ribosomal protein S14p/S29e ABCAM1_3291 PF00673 ribosomal L5P family C-terminus ABCAM1_3291 PF00281 Ribosomal protein L5 ABCAM1_3292 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABCAM1_3292 PF00467 KOW motif ABCAM1_3293 PF00238 Ribosomal protein L14p/L23e ABCAM1_3294 PF00366 Ribosomal protein S17 ABCAM1_3295 PF00831 Ribosomal L29 protein ABCAM1_3296 PF00252 Ribosomal protein L16p/L10e ABCAM1_3297 PF07650 KH domain ABCAM1_3297 PF00189 Ribosomal protein S3, C-terminal domain ABCAM1_3298 PF00237 Ribosomal protein L22p/L17e ABCAM1_3299 PF00203 Ribosomal protein S19 ABCAM1_3300 PF03947 Ribosomal Proteins L2, C-terminal domain ABCAM1_3300 PF00181 Ribosomal Proteins L2, RNA binding domain ABCAM1_3301 PF00276 Ribosomal protein L23 ABCAM1_3302 PF00573 Ribosomal protein L4/L1 family ABCAM1_3303 PF00297 Ribosomal protein L3 ABCAM1_3304 PF00338 Ribosomal protein S10p/S20e ABCAM1_3305 PF00117 Glutamine amidotransferase class-I ABCAM1_3306 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCAM1_3307 PF05872 Bacterial protein of unknown function (DUF853) ABCAM1_3308 PF00970 Oxidoreductase FAD-binding domain ABCAM1_3308 PF00175 Oxidoreductase NAD-binding domain ABCAM1_3308 PF00042 Globin ABCAM1_3309 PF02082 Transcriptional regulator ABCAM1_3310 PF01926 50S ribosome-binding GTPase ABCAM1_3312 PF00375 Sodium:dicarboxylate symporter family ABCAM1_3314 PF01553 Acyltransferase ABCAM1_3317 PF00270 DEAD/DEAH box helicase ABCAM1_3317 PF17191 RecG wedge domain ABCAM1_3317 PF00271 Helicase conserved C-terminal domain ABCAM1_3318 PF00156 Phosphoribosyl transferase domain ABCAM1_3319 PF00293 NUDIX domain ABCAM1_3320 PF03641 Possible lysine decarboxylase ABCAM1_3321 PF01544 CorA-like Mg2+ transporter protein ABCAM1_3323 PF05494 MlaC protein ABCAM1_3325 PF02405 Permease MlaE ABCAM1_3326 PF00005 ABC transporter ABCAM1_3328 PF00271 Helicase conserved C-terminal domain ABCAM1_3328 PF12343 Cold shock protein DEAD box A ABCAM1_3328 PF03880 DbpA RNA binding domain ABCAM1_3328 PF00270 DEAD/DEAH box helicase ABCAM1_3329 PF00459 Inositol monophosphatase family ABCAM1_3330 PF02779 Transketolase, pyrimidine binding domain ABCAM1_3330 PF02780 Transketolase, C-terminal domain ABCAM1_3330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABCAM1_3331 PF00925 GTP cyclohydrolase II ABCAM1_3332 PF01218 Coproporphyrinogen III oxidase ABCAM1_3333 PF08501 Shikimate dehydrogenase substrate binding domain ABCAM1_3333 PF01488 Shikimate / quinate 5-dehydrogenase ABCAM1_3333 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABCAM1_3336 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCAM1_3336 PF02770 Acyl-CoA dehydrogenase, middle domain ABCAM1_3336 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCAM1_3336 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCAM1_3338 PF04024 PspC domain ABCAM1_3339 PF00571 CBS domain ABCAM1_3342 PF07690 Major Facilitator Superfamily ABCAM1_3345 PF05746 DALR anticodon binding domain ABCAM1_3345 PF02092 Glycyl-tRNA synthetase beta subunit ABCAM1_3349 PF00892 EamA-like transporter family ABCAM1_3350 PF03466 LysR substrate binding domain ABCAM1_3350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3356 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABCAM1_3357 PF04996 Succinylarginine dihydrolase ABCAM1_3358 PF00171 Aldehyde dehydrogenase family ABCAM1_3359 PF04958 Arginine N-succinyltransferase beta subunit ABCAM1_3360 PF00202 Aminotransferase class-III ABCAM1_3361 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABCAM1_3361 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABCAM1_3362 PF00324 Amino acid permease ABCAM1_3364 PF08241 Methyltransferase domain ABCAM1_3369 PF01594 AI-2E family transporter ABCAM1_3370 PF00080 Copper/zinc superoxide dismutase (SODC) ABCAM1_3371 PF12805 FUSC-like inner membrane protein yccS ABCAM1_3372 PF07690 Major Facilitator Superfamily ABCAM1_3374 PF02525 Flavodoxin-like fold ABCAM1_3375 PF03992 Antibiotic biosynthesis monooxygenase ABCAM1_3377 PF01565 FAD binding domain ABCAM1_3377 PF02913 FAD linked oxidases, C-terminal domain ABCAM1_3378 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCAM1_3378 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCAM1_3379 PF00892 EamA-like transporter family ABCAM1_3380 PF00892 EamA-like transporter family ABCAM1_3382 PF01925 Sulfite exporter TauE/SafE ABCAM1_3383 PF09157 Pseudouridine synthase II TruB, C-terminal ABCAM1_3383 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABCAM1_3383 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABCAM1_3384 PF03280 Proteobacterial lipase chaperone protein ABCAM1_3385 PF00561 alpha/beta hydrolase fold ABCAM1_3386 PF01245 Ribosomal protein L19 ABCAM1_3387 PF01746 tRNA (Guanine-1)-methyltransferase ABCAM1_3388 PF01782 RimM N-terminal domain ABCAM1_3388 PF05239 PRC-barrel domain ABCAM1_3389 PF00886 Ribosomal protein S16 ABCAM1_3398 PF02401 LytB protein ABCAM1_3399 PF00625 Guanylate kinase ABCAM1_3400 PF01192 RNA polymerase Rpb6 ABCAM1_3401 PF02824 TGS domain ABCAM1_3401 PF04607 Region found in RelA / SpoT proteins ABCAM1_3401 PF13291 ACT domain ABCAM1_3402 PF01042 Endoribonuclease L-PSP ABCAM1_3403 PF04324 BFD-like [2Fe-2S] binding domain ABCAM1_3404 PF00210 Ferritin-like domain ABCAM1_3405 PF15864 Protein glycosylation ligase ABCAM1_3405 PF04932 O-Antigen ligase ABCAM1_3405 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABCAM1_3406 PF07963 Prokaryotic N-terminal methylation motif ABCAM1_3406 PF00114 Pilin (bacterial filament) ABCAM1_3408 PF04536 TPM domain ABCAM1_3409 PF04011 LemA family ABCAM1_3411 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABCAM1_3411 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCAM1_3412 PF01493 GXGXG motif ABCAM1_3412 PF01645 Conserved region in glutamate synthase ABCAM1_3412 PF04898 Glutamate synthase central domain ABCAM1_3412 PF00310 Glutamine amidotransferases class-II ABCAM1_3414 PF01761 3-dehydroquinate synthase ABCAM1_3415 PF01202 Shikimate kinase ABCAM1_3416 PF00263 Bacterial type II and III secretion system protein ABCAM1_3416 PF07660 Secretin and TonB N terminus short domain ABCAM1_3416 PF03958 Bacterial type II/III secretion system short domain ABCAM1_3416 PF11741 AMIN domain ABCAM1_3421 PF00912 Transglycosylase ABCAM1_3421 PF17092 Penicillin-binding protein OB-like domain ABCAM1_3421 PF00905 Penicillin binding protein transpeptidase domain ABCAM1_3422 PF13847 Methyltransferase domain ABCAM1_3424 PF00953 Glycosyl transferase family 4 ABCAM1_3425 PF08245 Mur ligase middle domain ABCAM1_3425 PF01225 Mur ligase family, catalytic domain ABCAM1_3425 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_3426 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_3426 PF01225 Mur ligase family, catalytic domain ABCAM1_3426 PF08245 Mur ligase middle domain ABCAM1_3427 PF00905 Penicillin binding protein transpeptidase domain ABCAM1_3427 PF03717 Penicillin-binding Protein dimerisation domain ABCAM1_3429 PF01795 MraW methylase family ABCAM1_3432 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCAM1_3433 PF00324 Amino acid permease ABCAM1_3437 PF01545 Cation efflux family ABCAM1_3438 PF00873 AcrB/AcrD/AcrF family ABCAM1_3439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_3439 PF00529 HlyD membrane-fusion protein of T1SS ABCAM1_3447 PF12848 ABC transporter ABCAM1_3447 PF00005 ABC transporter ABCAM1_3448 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCAM1_3449 PF00106 short chain dehydrogenase ABCAM1_3450 PF01740 STAS domain ABCAM1_3450 PF00916 Sulfate permease family ABCAM1_3451 PF09371 Tex-like protein N-terminal domain ABCAM1_3451 PF16921 Tex protein YqgF-like domain ABCAM1_3451 PF00575 S1 RNA binding domain ABCAM1_3451 PF17674 HHH domain ABCAM1_3452 PF00072 Response regulator receiver domain ABCAM1_3452 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_3453 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_3453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3453 PF00672 HAMP domain ABCAM1_3454 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABCAM1_3454 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABCAM1_3455 PF00583 Acetyltransferase (GNAT) family ABCAM1_3457 PF00475 Imidazoleglycerol-phosphate dehydratase ABCAM1_3458 PF00117 Glutamine amidotransferase class-I ABCAM1_3461 PF00977 Histidine biosynthesis protein ABCAM1_3466 PF01636 Phosphotransferase enzyme family ABCAM1_3467 PF00977 Histidine biosynthesis protein ABCAM1_3470 PF00230 Major intrinsic protein ABCAM1_3475 PF02705 K+ potassium transporter ABCAM1_3478 PF02525 Flavodoxin-like fold ABCAM1_3479 PF13276 HTH-like domain ABCAM1_3479 PF13333 Integrase core domain ABCAM1_3479 PF00665 Integrase core domain ABCAM1_3480 PF01527 Transposase ABCAM1_3487 PF00248 Aldo/keto reductase family ABCAM1_3491 PF03466 LysR substrate binding domain ABCAM1_3491 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3492 PF07690 Major Facilitator Superfamily ABCAM1_3496 PF01593 Flavin containing amine oxidoreductase ABCAM1_3497 PF02678 Pirin ABCAM1_3497 PF05726 Pirin C-terminal cupin domain ABCAM1_3498 PF00857 Isochorismatase family ABCAM1_3499 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3500 PF00171 Aldehyde dehydrogenase family ABCAM1_3501 PF00202 Aminotransferase class-III ABCAM1_3502 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_3502 PF00155 Aminotransferase class I and II ABCAM1_3503 PF00324 Amino acid permease ABCAM1_3505 PF03591 AzlC protein ABCAM1_3507 PF00436 Single-strand binding protein family ABCAM1_3508 PF07690 Major Facilitator Superfamily ABCAM1_3510 PF02581 Thiamine monophosphate synthase ABCAM1_3510 PF03070 TENA/THI-4/PQQC family ABCAM1_3510 PF08543 Phosphomethylpyrimidine kinase ABCAM1_3511 PF06942 GlpM protein ABCAM1_3513 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_3513 PF00107 Zinc-binding dehydrogenase ABCAM1_3514 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_3514 PF16925 Tetracyclin repressor-like, C-terminal domain ABCAM1_3515 PF17755 UvrA DNA-binding domain ABCAM1_3515 PF17760 UvrA interaction domain ABCAM1_3516 PF17158 Membrane-associated sensor, integral membrane domain ABCAM1_3516 PF00990 Diguanylate cyclase, GGDEF domain ABCAM1_3518 PF02028 BCCT, betaine/carnitine/choline family transporter ABCAM1_3520 PF00474 Sodium:solute symporter family ABCAM1_3521 PF04341 Protein of unknown function, DUF485 ABCAM1_3522 PF00072 Response regulator receiver domain ABCAM1_3522 PF00672 HAMP domain ABCAM1_3522 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3522 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_3522 PF01627 Hpt domain ABCAM1_3524 PF00196 Bacterial regulatory proteins, luxR family ABCAM1_3524 PF00072 Response regulator receiver domain ABCAM1_3525 PF03358 NADPH-dependent FMN reductase ABCAM1_3526 PF00296 Luciferase-like monooxygenase ABCAM1_3527 PF01037 Lrp/AsnC ligand binding domain ABCAM1_3528 PF00857 Isochorismatase family ABCAM1_3529 PF13193 AMP-binding enzyme C-terminal domain ABCAM1_3529 PF16177 Acetyl-coenzyme A synthetase N-terminus ABCAM1_3529 PF00501 AMP-binding enzyme ABCAM1_3531 PF00924 Mechanosensitive ion channel ABCAM1_3532 PF04452 RNA methyltransferase ABCAM1_3533 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABCAM1_3534 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_3537 PF03462 PCRF domain ABCAM1_3537 PF00472 RF-1 domain ABCAM1_3539 PF02272 DHHA1 domain ABCAM1_3539 PF01368 DHH family ABCAM1_3539 PF17768 RecJ OB domain ABCAM1_3540 PF01243 Pyridoxamine 5'-phosphate oxidase ABCAM1_3540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABCAM1_3541 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABCAM1_3541 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABCAM1_3541 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABCAM1_3541 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABCAM1_3542 PF00478 IMP dehydrogenase / GMP reductase domain ABCAM1_3542 PF00571 CBS domain ABCAM1_3543 PF03692 Putative zinc- or iron-chelating domain ABCAM1_3544 PF01613 Flavin reductase like domain ABCAM1_3544 PF00258 Flavodoxin ABCAM1_3549 PF00593 TonB dependent receptor ABCAM1_3549 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_3550 PF01169 Uncharacterized protein family UPF0016 ABCAM1_3552 PF02817 e3 binding domain ABCAM1_3552 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABCAM1_3552 PF00364 Biotin-requiring enzyme ABCAM1_3553 PF17831 Pyruvate dehydrogenase E1 component middle domain ABCAM1_3553 PF00456 Transketolase, thiamine diphosphate binding domain ABCAM1_3554 PF01551 Peptidase family M23 ABCAM1_3556 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABCAM1_3557 PF12327 FtsZ family, C-terminal domain ABCAM1_3557 PF00091 Tubulin/FtsZ family, GTPase domain ABCAM1_3558 PF02491 SHS2 domain inserted in FTSA ABCAM1_3559 PF03799 Cell division protein FtsQ ABCAM1_3559 PF08478 POTRA domain, FtsQ-type ABCAM1_3560 PF07478 D-ala D-ala ligase C-terminus ABCAM1_3560 PF01820 D-ala D-ala ligase N-terminus ABCAM1_3561 PF01225 Mur ligase family, catalytic domain ABCAM1_3561 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_3561 PF08245 Mur ligase middle domain ABCAM1_3562 PF03033 Glycosyltransferase family 28 N-terminal domain ABCAM1_3562 PF04101 Glycosyltransferase family 28 C-terminal domain ABCAM1_3563 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABCAM1_3563 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABCAM1_3565 PF00593 TonB dependent receptor ABCAM1_3565 PF07715 TonB-dependent Receptor Plug Domain ABCAM1_3566 PF00156 Phosphoribosyl transferase domain ABCAM1_3567 PF03372 Endonuclease/Exonuclease/phosphatase family ABCAM1_3568 PF03960 ArsC family ABCAM1_3570 PF07859 alpha/beta hydrolase fold ABCAM1_3573 PF11412 Disulphide bond corrector protein DsbC ABCAM1_3573 PF02683 Cytochrome C biogenesis protein transmembrane region ABCAM1_3579 PF00576 HIUase/Transthyretin family ABCAM1_3580 PF00860 Permease family ABCAM1_3582 PF01494 FAD binding domain ABCAM1_3583 PF03561 Allantoicase repeat ABCAM1_3584 PF04115 Ureidoglycolate lyase ABCAM1_3585 PF00204 DNA gyrase B ABCAM1_3585 PF01751 Toprim domain ABCAM1_3585 PF00986 DNA gyrase B subunit, carboxyl terminus ABCAM1_3585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3586 PF05728 Uncharacterised protein family (UPF0227) ABCAM1_3588 PF13737 Transposase DDE domain ABCAM1_3589 PF02600 Disulfide bond formation protein DsbB ABCAM1_3590 PF04262 Glutamate-cysteine ligase ABCAM1_3593 PF04286 Protein of unknown function (DUF445) ABCAM1_3594 PF00155 Aminotransferase class I and II ABCAM1_3595 PF01554 MatE ABCAM1_3596 PF00106 short chain dehydrogenase ABCAM1_3598 PF00072 Response regulator receiver domain ABCAM1_3598 PF00486 Transcriptional regulatory protein, C terminal ABCAM1_3599 PF00989 PAS fold ABCAM1_3599 PF11808 Phosphate regulon sensor protein PhoR ABCAM1_3599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCAM1_3599 PF00512 His Kinase A (phospho-acceptor) domain ABCAM1_3601 PF02666 Phosphatidylserine decarboxylase ABCAM1_3602 PF00581 Rhodanese-like domain ABCAM1_3603 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABCAM1_3603 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABCAM1_3604 PF02580 D-Tyr-tRNA(Tyr) deacylase ABCAM1_3609 PF00925 GTP cyclohydrolase II ABCAM1_3609 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABCAM1_3610 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABCAM1_3611 PF01029 NusB family ABCAM1_3612 PF02769 AIR synthase related protein, C-terminal domain ABCAM1_3612 PF00586 AIR synthase related protein, N-terminal domain ABCAM1_3613 PF04608 Phosphatidylglycerophosphatase A ABCAM1_3614 PF00132 Bacterial transferase hexapeptide (six repeats) ABCAM1_3614 PF12804 MobA-like NTP transferase domain ABCAM1_3614 PF14602 Hexapeptide repeat of succinyl-transferase ABCAM1_3615 PF01380 SIS domain ABCAM1_3616 PF01177 Asp/Glu/Hydantoin racemase ABCAM1_3617 PF13419 Haloacid dehalogenase-like hydrolase ABCAM1_3619 PF13737 Transposase DDE domain ABCAM1_3620 PF00491 Arginase family ABCAM1_3621 PF01979 Amidohydrolase family ABCAM1_3622 PF00324 Amino acid permease ABCAM1_3623 PF00221 Aromatic amino acid lyase ABCAM1_3624 PF01175 Urocanase Rossmann-like domain ABCAM1_3624 PF17391 Urocanase N-terminal domain ABCAM1_3624 PF17392 Urocanase C-terminal domain ABCAM1_3625 PF05962 HutD ABCAM1_3626 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_3626 PF07702 UTRA domain ABCAM1_3627 PF13737 Transposase DDE domain ABCAM1_3629 PF00324 Amino acid permease ABCAM1_3631 PF14497 Glutathione S-transferase, C-terminal domain ABCAM1_3631 PF02798 Glutathione S-transferase, N-terminal domain ABCAM1_3632 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCAM1_3634 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCAM1_3635 PF04463 Protein of unknown function (DUF523) ABCAM1_3637 PF01758 Sodium Bile acid symporter family ABCAM1_3638 PF00857 Isochorismatase family ABCAM1_3639 PF00701 Dihydrodipicolinate synthetase family ABCAM1_3641 PF01259 SAICAR synthetase ABCAM1_3643 PF01226 Formate/nitrite transporter ABCAM1_3644 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_3644 PF16193 AAA C-terminal domain ABCAM1_3644 PF12002 MgsA AAA+ ATPase C terminal ABCAM1_3645 PF07995 Glucose / Sorbosone dehydrogenase ABCAM1_3646 PF03692 Putative zinc- or iron-chelating domain ABCAM1_3647 PF07043 Protein of unknown function (DUF1328) ABCAM1_3650 PF10576 Iron-sulfur binding domain of endonuclease III ABCAM1_3650 PF14815 NUDIX domain ABCAM1_3650 PF00730 HhH-GPD superfamily base excision DNA repair protein ABCAM1_3650 PF00633 Helix-hairpin-helix motif ABCAM1_3653 PF03352 Methyladenine glycosylase ABCAM1_3654 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_3654 PF00107 Zinc-binding dehydrogenase ABCAM1_3655 PF00155 Aminotransferase class I and II ABCAM1_3655 PF00392 Bacterial regulatory proteins, gntR family ABCAM1_3657 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3657 PF03466 LysR substrate binding domain ABCAM1_3658 PF00248 Aldo/keto reductase family ABCAM1_3659 PF07690 Major Facilitator Superfamily ABCAM1_3661 PF01113 Dihydrodipicolinate reductase, N-terminus ABCAM1_3661 PF05173 Dihydrodipicolinate reductase, C-terminus ABCAM1_3663 PF00226 DnaJ domain ABCAM1_3663 PF01556 DnaJ C terminal domain ABCAM1_3663 PF00684 DnaJ central domain ABCAM1_3665 PF00873 AcrB/AcrD/AcrF family ABCAM1_3666 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCAM1_3667 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_3667 PF08361 MAATS-type transcriptional repressor, C-terminal region ABCAM1_3668 PF00311 Phosphoenolpyruvate carboxylase ABCAM1_3669 PF00860 Permease family ABCAM1_3670 PF03466 LysR substrate binding domain ABCAM1_3670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3673 PF00920 Dehydratase family ABCAM1_3674 PF02911 Formyl transferase, C-terminal domain ABCAM1_3674 PF00551 Formyl transferase ABCAM1_3675 PF01029 NusB family ABCAM1_3675 PF01189 16S rRNA methyltransferase RsmB/F ABCAM1_3677 PF00209 Sodium:neurotransmitter symporter family ABCAM1_3680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABCAM1_3681 PF07859 alpha/beta hydrolase fold ABCAM1_3685 PF03466 LysR substrate binding domain ABCAM1_3685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCAM1_3686 PF01025 GrpE ABCAM1_3687 PF00012 Hsp70 protein ABCAM1_3688 PF13737 Transposase DDE domain ABCAM1_3695 PF13406 Transglycosylase SLT domain ABCAM1_3696 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABCAM1_3696 PF02222 ATP-grasp domain ABCAM1_3697 PF00731 AIR carboxylase ABCAM1_3699 PF08245 Mur ligase middle domain ABCAM1_3699 PF02875 Mur ligase family, glutamate ligase domain ABCAM1_3699 PF01225 Mur ligase family, catalytic domain ABCAM1_3701 PF01569 PAP2 superfamily ABCAM1_3702 PF03741 Integral membrane protein TerC family ABCAM1_3704 PF03738 Glutathionylspermidine synthase preATP-grasp ABCAM1_3705 PF00355 Rieske [2Fe-2S] domain ABCAM1_3706 PF01979 Amidohydrolase family ABCAM1_3707 PF00156 Phosphoribosyl transferase domain ABCAM1_3709 PF13098 Thioredoxin-like domain ABCAM1_3709 PF10411 Disulfide bond isomerase protein N-terminus ABCAM1_3710 PF16916 Dimerisation domain of Zinc Transporter ABCAM1_3710 PF01545 Cation efflux family ABCAM1_3711 PF02583 Metal-sensitive transcriptional repressor ABCAM1_3712 PF10396 GTP-binding protein TrmE N-terminus ABCAM1_3712 PF01926 50S ribosome-binding GTPase ABCAM1_3712 PF12631 MnmE helical domain ABCAM1_3713 PF02096 60Kd inner membrane protein ABCAM1_3713 PF14849 YidC periplasmic domain ABCAM1_3714 PF01809 Putative membrane protein insertion efficiency factor ABCAM1_3715 PF00825 Ribonuclease P ABCAM1_3716 PF00468 Ribosomal protein L34 ABCAM1_3718 PF13737 Transposase DDE domain ABCAM1_3720 PF01435 Peptidase family M48 ABCAM1_3721 PF13180 PDZ domain ABCAM1_3725 PF00085 Thioredoxin ABCAM1_3730 PF10431 C-terminal, D2-small domain, of ClpB protein ABCAM1_3730 PF02861 Clp amino terminal domain, pathogenicity island component ABCAM1_3730 PF17871 AAA lid domain ABCAM1_3730 PF07724 AAA domain (Cdc48 subfamily) ABCAM1_3730 PF00004 ATPase family associated with various cellular activities (AAA) ABCAM1_3731 PF00011 Hsp20/alpha crystallin family ABCAM1_3732 PF13737 Transposase DDE domain ABCAM1_3734 PF12161 HsdM N-terminal domain ABCAM1_3734 PF02384 N-6 DNA Methylase ABCAM1_3737 PF00665 Integrase core domain ABCAM1_3737 PF13276 HTH-like domain ABCAM1_3737 PF13333 Integrase core domain ABCAM1_3739 PF13276 HTH-like domain ABCAM1_3739 PF00665 Integrase core domain ABCAM1_3739 PF13333 Integrase core domain ABCAM1_3741 PF08463 EcoEI R protein C-terminal ABCAM1_3741 PF00271 Helicase conserved C-terminal domain ABCAM1_3741 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABCAM1_3741 PF04851 Type III restriction enzyme, res subunit ABCAM1_3744 PF00589 Phage integrase family ABCAM1_3744 PF13356 Arm DNA-binding domain ABCAM1_3745 PF04151 Bacterial pre-peptidase C-terminal domain ABCAM1_3746 PF13737 Transposase DDE domain ABCAM1_3748 PF16884 N-terminal domain of oxidoreductase ABCAM1_3748 PF00107 Zinc-binding dehydrogenase ABCAM1_3749 PF16925 Tetracyclin repressor-like, C-terminal domain ABCAM1_3749 PF00440 Bacterial regulatory proteins, tetR family ABCAM1_3751 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCAM1_3753 PF00465 Iron-containing alcohol dehydrogenase ABCAM1_3755 PF00756 Putative esterase ABCAM1_3756 PF00107 Zinc-binding dehydrogenase ABCAM1_3756 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_3757 PF02583 Metal-sensitive transcriptional repressor ABCAM1_3758 PF01527 Transposase ABCAM1_3759 PF13333 Integrase core domain ABCAM1_3759 PF00665 Integrase core domain ABCAM1_3759 PF13276 HTH-like domain ABCAM1_3760 PF02254 TrkA-N domain ABCAM1_3760 PF00999 Sodium/hydrogen exchanger family ABCAM1_3761 PF13610 DDE domain ABCAM1_3762 PF08240 Alcohol dehydrogenase GroES-like domain ABCAM1_3762 PF13823 Alcohol dehydrogenase GroES-associated ABCAM1_3762 PF00107 Zinc-binding dehydrogenase ABCAM1_3763 PF13737 Transposase DDE domain ABCAM1_3764 PF17755 UvrA DNA-binding domain ABCAM1_3765 PF00872 Transposase, Mutator family ABCAM1_3766 PF01381 Helix-turn-helix ABCAM1_3767 PF05973 Phage derived protein Gp49-like (DUF891) ABCAM1_3770 PF13276 HTH-like domain ABCAM1_3770 PF00665 Integrase core domain ABCAM1_3770 PF13333 Integrase core domain ABCAM1_3772 PF05973 Phage derived protein Gp49-like (DUF891) ABCAM1_3779 PF13276 HTH-like domain ABCAM1_3779 PF00665 Integrase core domain ABCAM1_3779 PF13333 Integrase core domain ABCAM1_3781 PF05973 Phage derived protein Gp49-like (DUF891) ABCAM1_3786 PF00872 Transposase, Mutator family ABCAM1_3793 PF13276 HTH-like domain ABCAM1_3793 PF13333 Integrase core domain ABCAM1_3793 PF00665 Integrase core domain ABCAM1_3795 PF13737 Transposase DDE domain ABCAM1_3801 PF02661 Fic/DOC family ABCAM1_3802 PF18543 Intracellular delivery domain ABCAM1_3802 PF02661 Fic/DOC family ABCAM1_3809 PF02195 ParB-like nuclease domain ABCAM1_3809 PF17762 HTH domain found in ParB protein ABCAM1_3810 PF13614 AAA domain ABCAM1_3811 PF01051 Initiator Replication protein ABCAM1_3823 PF01051 Initiator Replication protein ABCAM1_3831 PF00313 'Cold-shock' DNA-binding domain