locus-tag class description NP567_00025 PF00171 Aldehyde dehydrogenase family NP567_00045 PF13359 DDE superfamily endonuclease NP567_00045 PF13613 Helix-turn-helix of DDE superfamily endonuclease NP567_00075 PF00313 'Cold-shock' DNA-binding domain NP567_00120 PF17841 BID domain of Bartonella effector protein (Bep) NP567_00120 PF02661 Fic/DOC family NP567_00180 PF13936 Helix-turn-helix domain NP567_00180 PF00665 Integrase core domain NP567_00185 PF00753 Metallo-beta-lactamase superfamily NP567_00195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NP567_00210 PF03091 CutA1 divalent ion tolerance protein NP567_00215 PF00166 Chaperonin 10 Kd subunit NP567_00220 PF00118 TCP-1/cpn60 chaperonin family NP567_00235 PF00665 Integrase core domain NP567_00235 PF13936 Helix-turn-helix domain NP567_00260 PF01610 Transposase NP567_00260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NP567_00260 PF13542 Helix-turn-helix domain of transposase family ISL3 NP567_00290 PF18337 RapA N-terminal Tudor like domain NP567_00290 PF18339 RapA N-terminal Tudor like domain 1 NP567_00290 PF00271 Helicase conserved C-terminal domain NP567_00290 PF00176 SNF2 family N-terminal domain NP567_00290 PF12137 RNA polymerase recycling family C-terminal NP567_00335 PF13737 Transposase DDE domain NP567_00355 PF00565 Staphylococcal nuclease homologue NP567_00365 PF13495 Phage integrase, N-terminal SAM-like domain NP567_00365 PF00589 Phage integrase family NP567_00370 PF00186 Dihydrofolate reductase NP567_00375 PF00893 Small Multidrug Resistance protein NP567_00380 PF00809 Pterin binding enzyme NP567_00405 PF01555 DNA methylase NP567_00410 PF01555 DNA methylase NP567_00415 PF04851 Type III restriction enzyme, res subunit NP567_00560 PF02899 Phage integrase, N-terminal SAM-like domain NP567_00560 PF00589 Phage integrase family NP567_00585 PF08239 Bacterial SH3 domain NP567_00585 PF01520 N-acetylmuramoyl-L-alanine amidase NP567_00630 PF00486 Transcriptional regulatory protein, C terminal NP567_00630 PF00072 Response regulator receiver domain NP567_00640 PF07690 Major Facilitator Superfamily NP567_00645 PF00873 AcrB/AcrD/AcrF family NP567_00650 PF00529 HlyD membrane-fusion protein of T1SS NP567_00650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_00685 PF00005 ABC transporter NP567_00685 PF12848 ABC transporter NP567_00695 PF13610 DDE domain NP567_00700 PF03466 LysR substrate binding domain NP567_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_00715 PF13610 DDE domain NP567_00755 PF00962 Adenosine/AMP deaminase NP567_00765 PF03050 Transposase IS66 family NP567_00765 PF13817 IS66 C-terminal element NP567_00765 PF13007 Transposase C of IS166 homeodomain NP567_00765 PF13005 zinc-finger binding domain of transposase IS66 NP567_00780 PF03050 Transposase IS66 family NP567_00780 PF13007 Transposase C of IS166 homeodomain NP567_00780 PF13005 zinc-finger binding domain of transposase IS66 NP567_00780 PF13817 IS66 C-terminal element NP567_00800 PF14490 Helix-hairpin-helix containing domain NP567_00800 PF13538 UvrD-like helicase C-terminal domain NP567_00800 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NP567_00910 PF00239 Resolvase, N terminal domain NP567_00910 PF02796 Helix-turn-helix domain of resolvase NP567_00945 PF01636 Phosphotransferase enzyme family NP567_00970 PF13936 Helix-turn-helix domain NP567_00970 PF00665 Integrase core domain NP567_00990 PF01435 Peptidase family M48 NP567_01255 PF13361 UvrD-like helicase C-terminal domain NP567_01255 PF00580 UvrD/REP helicase N-terminal domain NP567_01290 PF13614 AAA domain NP567_01300 PF17762 HTH domain found in ParB protein NP567_01300 PF02195 ParB-like nuclease domain NP567_01315 PF00437 Type II/IV secretion system protein NP567_01435 PF02661 Fic/DOC family NP567_01495 PF03050 Transposase IS66 family NP567_01495 PF13817 IS66 C-terminal element NP567_01495 PF13007 Transposase C of IS166 homeodomain NP567_01495 PF13005 zinc-finger binding domain of transposase IS66 NP567_01515 PF13737 Transposase DDE domain NP567_01535 PF02151 UvrB/uvrC motif NP567_01535 PF04851 Type III restriction enzyme, res subunit NP567_01535 PF12344 Ultra-violet resistance protein B NP567_01535 PF17757 UvrB interaction domain NP567_01535 PF00271 Helicase conserved C-terminal domain NP567_01550 PF13005 zinc-finger binding domain of transposase IS66 NP567_01550 PF13007 Transposase C of IS166 homeodomain NP567_01550 PF13817 IS66 C-terminal element NP567_01550 PF03050 Transposase IS66 family NP567_01565 PF02322 Cytochrome bd terminal oxidase subunit II NP567_01585 PF13340 Putative transposase of IS4/5 family (DUF4096) NP567_01590 PF02583 Metal-sensitive transcriptional repressor NP567_01595 PF08240 Alcohol dehydrogenase GroES-like domain NP567_01595 PF00107 Zinc-binding dehydrogenase NP567_01600 PF04828 Glutathione-dependent formaldehyde-activating enzyme NP567_01615 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_01675 PF00717 Peptidase S24-like NP567_01680 PF13438 Domain of unknown function (DUF4113) NP567_01680 PF11799 impB/mucB/samB family C-terminal domain NP567_01680 PF11798 IMS family HHH motif NP567_01680 PF00817 impB/mucB/samB family NP567_01775 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_01785 PF09278 MerR, DNA binding NP567_01785 PF00376 MerR family regulatory protein NP567_01795 PF01022 Bacterial regulatory protein, arsR family NP567_01805 PF01545 Cation efflux family NP567_01810 PF00665 Integrase core domain NP567_01810 PF13936 Helix-turn-helix domain NP567_01825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_01825 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_01825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_01830 PF00743 Flavin-binding monooxygenase-like NP567_01835 PF01196 Ribosomal protein L17 NP567_01840 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NP567_01840 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NP567_01840 PF01000 RNA polymerase Rpb3/RpoA insert domain NP567_01845 PF00163 Ribosomal protein S4/S9 N-terminal domain NP567_01845 PF01479 S4 domain NP567_01850 PF00411 Ribosomal protein S11 NP567_01855 PF00416 Ribosomal protein S13/S18 NP567_01860 PF00444 Ribosomal protein L36 NP567_01865 PF00344 SecY translocase NP567_01870 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NP567_01875 PF00327 Ribosomal protein L30p/L7e NP567_01880 PF03719 Ribosomal protein S5, C-terminal domain NP567_01880 PF00333 Ribosomal protein S5, N-terminal domain NP567_01885 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NP567_01890 PF00347 Ribosomal protein L6 NP567_01895 PF00410 Ribosomal protein S8 NP567_01900 PF00253 Ribosomal protein S14p/S29e NP567_01905 PF00673 ribosomal L5P family C-terminus NP567_01905 PF00281 Ribosomal protein L5 NP567_01910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NP567_01910 PF00467 KOW motif NP567_01915 PF00238 Ribosomal protein L14p/L23e NP567_01920 PF00366 Ribosomal protein S17 NP567_01925 PF00831 Ribosomal L29 protein NP567_01930 PF00252 Ribosomal protein L16p/L10e NP567_01940 PF00237 Ribosomal protein L22p/L17e NP567_01945 PF00203 Ribosomal protein S19 NP567_01950 PF00181 Ribosomal Proteins L2, RNA binding domain NP567_01950 PF03947 Ribosomal Proteins L2, C-terminal domain NP567_01955 PF00276 Ribosomal protein L23 NP567_01960 PF00573 Ribosomal protein L4/L1 family NP567_01965 PF00297 Ribosomal protein L3 NP567_01970 PF00338 Ribosomal protein S10p/S20e NP567_01975 PF00117 Glutamine amidotransferase class-I NP567_01985 PF05872 Bacterial protein of unknown function (DUF853) NP567_01995 PF00042 Globin NP567_01995 PF00175 Oxidoreductase NAD-binding domain NP567_01995 PF00970 Oxidoreductase FAD-binding domain NP567_02000 PF02082 Transcriptional regulator NP567_02015 PF00375 Sodium:dicarboxylate symporter family NP567_02045 PF00156 Phosphoribosyl transferase domain NP567_02050 PF00293 NUDIX domain NP567_02055 PF03641 Possible lysine decarboxylase NP567_02060 PF01544 CorA-like Mg2+ transporter protein NP567_02070 PF05494 MlaC protein NP567_02080 PF02405 Permease MlaE NP567_02085 PF00005 ABC transporter NP567_02095 PF03880 DbpA RNA binding domain NP567_02095 PF00270 DEAD/DEAH box helicase NP567_02095 PF00271 Helicase conserved C-terminal domain NP567_02095 PF12343 Cold shock protein DEAD box A NP567_02100 PF00459 Inositol monophosphatase family NP567_02105 PF02779 Transketolase, pyrimidine binding domain NP567_02105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NP567_02105 PF02780 Transketolase, C-terminal domain NP567_02110 PF00925 GTP cyclohydrolase II NP567_02115 PF01218 Coproporphyrinogen III oxidase NP567_02120 PF01488 Shikimate / quinate 5-dehydrogenase NP567_02120 PF08501 Shikimate dehydrogenase substrate binding domain NP567_02120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NP567_02130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_02130 PF12806 Acetyl-CoA dehydrogenase C-terminal like NP567_02130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_02130 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_02140 PF04024 PspC domain NP567_02145 PF00571 CBS domain NP567_02160 PF07690 Major Facilitator Superfamily NP567_02165 PF02091 Glycyl-tRNA synthetase alpha subunit NP567_02170 PF05746 DALR anticodon binding domain NP567_02170 PF02092 Glycyl-tRNA synthetase beta subunit NP567_02190 PF00892 EamA-like transporter family NP567_02225 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NP567_02230 PF04996 Succinylarginine dihydrolase NP567_02235 PF00171 Aldehyde dehydrogenase family NP567_02240 PF04958 Arginine N-succinyltransferase beta subunit NP567_02245 PF00202 Aminotransferase class-III NP567_02250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NP567_02250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NP567_02265 PF08241 Methyltransferase domain NP567_02285 PF13614 AAA domain NP567_02290 PF01594 AI-2E family transporter NP567_02295 PF00080 Copper/zinc superoxide dismutase (SODC) NP567_02320 PF03992 Antibiotic biosynthesis monooxygenase NP567_02330 PF02913 FAD linked oxidases, C-terminal domain NP567_02330 PF01565 FAD binding domain NP567_02335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP567_02335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP567_02340 PF00892 EamA-like transporter family NP567_02345 PF00892 EamA-like transporter family NP567_02355 PF01925 Sulfite exporter TauE/SafE NP567_02365 PF03280 Proteobacterial lipase chaperone protein NP567_02375 PF01245 Ribosomal protein L19 NP567_02380 PF01746 tRNA (Guanine-1)-methyltransferase NP567_02385 PF05239 PRC-barrel domain NP567_02385 PF01782 RimM N-terminal domain NP567_02390 PF00886 Ribosomal protein S16 NP567_02430 PF02401 LytB protein NP567_02435 PF00625 Guanylate kinase NP567_02440 PF01192 RNA polymerase Rpb6 NP567_02450 PF01042 Endoribonuclease L-PSP NP567_02455 PF04324 BFD-like [2Fe-2S] binding domain NP567_02470 PF00114 Pilin (bacterial filament) NP567_02470 PF07963 Prokaryotic N-terminal methylation motif NP567_02480 PF04536 TPM domain NP567_02485 PF04011 LemA family NP567_02495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP567_02495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_02500 PF00310 Glutamine amidotransferases class-II NP567_02500 PF04898 Glutamate synthase central domain NP567_02500 PF01645 Conserved region in glutamate synthase NP567_02500 PF01493 GXGXG motif NP567_02515 PF01202 Shikimate kinase NP567_02520 PF07660 Secretin and TonB N terminus short domain NP567_02520 PF00263 Bacterial type II and III secretion system protein NP567_02520 PF03958 Bacterial type II/III secretion system short domain NP567_02520 PF11741 AMIN domain NP567_02530 PF04350 Pilus assembly protein, PilO NP567_02550 PF13847 Methyltransferase domain NP567_02560 PF00953 Glycosyl transferase family 4 NP567_02565 PF01225 Mur ligase family, catalytic domain NP567_02565 PF02875 Mur ligase family, glutamate ligase domain NP567_02565 PF08245 Mur ligase middle domain NP567_02570 PF02875 Mur ligase family, glutamate ligase domain NP567_02570 PF08245 Mur ligase middle domain NP567_02570 PF01225 Mur ligase family, catalytic domain NP567_02585 PF01795 MraW methylase family NP567_02600 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP567_02645 PF01545 Cation efflux family NP567_02650 PF00873 AcrB/AcrD/AcrF family NP567_02655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_02655 PF00529 HlyD membrane-fusion protein of T1SS NP567_02680 PF12848 ABC transporter NP567_02680 PF00005 ABC transporter NP567_02685 PF01053 Cys/Met metabolism PLP-dependent enzyme NP567_02690 PF01965 DJ-1/PfpI family NP567_02705 PF00106 short chain dehydrogenase NP567_02710 PF00916 Sulfate permease family NP567_02710 PF01740 STAS domain NP567_02715 PF17674 HHH domain NP567_02715 PF00575 S1 RNA binding domain NP567_02715 PF09371 Tex-like protein N-terminal domain NP567_02715 PF16921 Tex protein YqgF-like domain NP567_02725 PF00512 His Kinase A (phospho-acceptor) domain NP567_02725 PF00672 HAMP domain NP567_02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_02735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NP567_02735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NP567_02740 PF00583 Acetyltransferase (GNAT) family NP567_02760 PF00475 Imidazoleglycerol-phosphate dehydratase NP567_02765 PF00117 Glutamine amidotransferase class-I NP567_02780 PF00977 Histidine biosynthesis protein NP567_02795 PF03992 Antibiotic biosynthesis monooxygenase NP567_02810 PF01636 Phosphotransferase enzyme family NP567_02815 PF00977 Histidine biosynthesis protein NP567_02830 PF00230 Major intrinsic protein NP567_02855 PF02705 K+ potassium transporter NP567_02865 PF12833 Helix-turn-helix domain NP567_02890 PF02525 Flavodoxin-like fold NP567_02895 PF01638 HxlR-like helix-turn-helix NP567_02905 PF00872 Transposase, Mutator family NP567_02930 PF01638 HxlR-like helix-turn-helix NP567_02950 PF12833 Helix-turn-helix domain NP567_02950 PF02311 AraC-like ligand binding domain NP567_02980 PF07690 Major Facilitator Superfamily NP567_03035 PF02463 RecF/RecN/SMC N terminal domain NP567_03060 PF01593 Flavin containing amine oxidoreductase NP567_03065 PF02678 Pirin NP567_03065 PF05726 Pirin C-terminal cupin domain NP567_03070 PF00857 Isochorismatase family NP567_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_03080 PF00171 Aldehyde dehydrogenase family NP567_03085 PF00202 Aminotransferase class-III NP567_03090 PF00392 Bacterial regulatory proteins, gntR family NP567_03090 PF00155 Aminotransferase class I and II NP567_03095 PF00324 Amino acid permease NP567_03105 PF03591 AzlC protein NP567_03120 PF07690 Major Facilitator Superfamily NP567_03130 PF08543 Phosphomethylpyrimidine kinase NP567_03130 PF03070 TENA/THI-4/PQQC family NP567_03130 PF02581 Thiamine monophosphate synthase NP567_03135 PF06942 GlpM protein NP567_03145 PF00107 Zinc-binding dehydrogenase NP567_03145 PF08240 Alcohol dehydrogenase GroES-like domain NP567_03150 PF16925 Tetracyclin repressor-like, C-terminal domain NP567_03150 PF00440 Bacterial regulatory proteins, tetR family NP567_03155 PF00005 ABC transporter NP567_03155 PF17755 UvrA DNA-binding domain NP567_03155 PF17760 UvrA interaction domain NP567_03170 PF02028 BCCT, betaine/carnitine/choline family transporter NP567_03180 PF00474 Sodium:solute symporter family NP567_03190 PF00072 Response regulator receiver domain NP567_03190 PF01627 Hpt domain NP567_03190 PF00512 His Kinase A (phospho-acceptor) domain NP567_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_03190 PF00672 HAMP domain NP567_03200 PF00196 Bacterial regulatory proteins, luxR family NP567_03200 PF00072 Response regulator receiver domain NP567_03205 PF03358 NADPH-dependent FMN reductase NP567_03210 PF00296 Luciferase-like monooxygenase NP567_03215 PF01037 Lrp/AsnC ligand binding domain NP567_03220 PF00857 Isochorismatase family NP567_03225 PF16177 Acetyl-coenzyme A synthetase N-terminus NP567_03225 PF00501 AMP-binding enzyme NP567_03225 PF13193 AMP-binding enzyme C-terminal domain NP567_03235 PF00924 Mechanosensitive ion channel NP567_03250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_03270 PF17768 RecJ OB domain NP567_03270 PF02272 DHHA1 domain NP567_03270 PF01368 DHH family NP567_03275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NP567_03275 PF01243 Pyridoxamine 5'-phosphate oxidase NP567_03285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP567_03285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP567_03285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP567_03285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP567_03290 PF00478 IMP dehydrogenase / GMP reductase domain NP567_03290 PF00571 CBS domain NP567_03295 PF03692 Putative zinc- or iron-chelating domain NP567_03300 PF01613 Flavin reductase like domain NP567_03300 PF00258 Flavodoxin NP567_03305 PF07715 TonB-dependent Receptor Plug Domain NP567_03305 PF00593 TonB dependent receptor NP567_03310 PF01169 Uncharacterized protein family UPF0016 NP567_03320 PF02817 e3 binding domain NP567_03320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP567_03320 PF00364 Biotin-requiring enzyme NP567_03325 PF00456 Transketolase, thiamine diphosphate binding domain NP567_03325 PF17831 Pyruvate dehydrogenase E1 component middle domain NP567_03330 PF01551 Peptidase family M23 NP567_03340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NP567_03345 PF12327 FtsZ family, C-terminal domain NP567_03345 PF00091 Tubulin/FtsZ family, GTPase domain NP567_03350 PF02491 SHS2 domain inserted in FTSA NP567_03355 PF08478 POTRA domain, FtsQ-type NP567_03355 PF03799 Cell division protein FtsQ NP567_03360 PF01820 D-ala D-ala ligase N-terminus NP567_03360 PF07478 D-ala D-ala ligase C-terminus NP567_03365 PF08245 Mur ligase middle domain NP567_03365 PF02875 Mur ligase family, glutamate ligase domain NP567_03365 PF01225 Mur ligase family, catalytic domain NP567_03370 PF03033 Glycosyltransferase family 28 N-terminal domain NP567_03370 PF04101 Glycosyltransferase family 28 C-terminal domain NP567_03375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NP567_03375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NP567_03385 PF07715 TonB-dependent Receptor Plug Domain NP567_03385 PF00593 TonB dependent receptor NP567_03400 PF03372 Endonuclease/Exonuclease/phosphatase family NP567_03405 PF03960 ArsC family NP567_03425 PF11412 Disulphide bond corrector protein DsbC NP567_03425 PF02683 Cytochrome C biogenesis protein transmembrane region NP567_03460 PF00860 Permease family NP567_03470 PF01494 FAD binding domain NP567_03475 PF03561 Allantoicase repeat NP567_03480 PF04115 Ureidoglycolate lyase NP567_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_03485 PF01751 Toprim domain NP567_03485 PF00204 DNA gyrase B NP567_03485 PF00986 DNA gyrase B subunit, carboxyl terminus NP567_03490 PF05728 Uncharacterised protein family (UPF0227) NP567_03540 PF00877 NlpC/P60 family NP567_03540 PF01476 LysM domain NP567_03545 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NP567_03545 PF04717 Type VI secretion system, phage-baseplate injector NP567_03545 PF13296 Putative type VI secretion system Rhs element Vgr NP567_03555 PF04262 Glutamate-cysteine ligase NP567_03570 PF04286 Protein of unknown function (DUF445) NP567_03580 PF01554 MatE NP567_03585 PF00106 short chain dehydrogenase NP567_03610 PF02666 Phosphatidylserine decarboxylase NP567_03615 PF00581 Rhodanese-like domain NP567_03620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NP567_03620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NP567_03630 PF06628 Catalase-related immune-responsive NP567_03630 PF00199 Catalase NP567_03635 PF02580 D-Tyr-tRNA(Tyr) deacylase NP567_03660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP567_03660 PF00925 GTP cyclohydrolase II NP567_03665 PF00885 6,7-dimethyl-8-ribityllumazine synthase NP567_03670 PF01029 NusB family NP567_03680 PF04608 Phosphatidylglycerophosphatase A NP567_03685 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_03685 PF12804 MobA-like NTP transferase domain NP567_03685 PF14602 Hexapeptide repeat of succinyl-transferase NP567_03690 PF01380 SIS domain NP567_03710 PF01177 Asp/Glu/Hydantoin racemase NP567_03725 PF00491 Arginase family NP567_03730 PF01979 Amidohydrolase family NP567_03735 PF00324 Amino acid permease NP567_03740 PF00221 Aromatic amino acid lyase NP567_03745 PF01175 Urocanase Rossmann-like domain NP567_03745 PF17391 Urocanase N-terminal domain NP567_03745 PF17392 Urocanase C-terminal domain NP567_03750 PF05962 HutD NP567_03755 PF00392 Bacterial regulatory proteins, gntR family NP567_03755 PF07702 UTRA domain NP567_03765 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP567_03765 PF07683 Cobalamin synthesis protein cobW C-terminal domain NP567_03775 PF00324 Amino acid permease NP567_03785 PF14497 Glutathione S-transferase, C-terminal domain NP567_03785 PF02798 Glutathione S-transferase, N-terminal domain NP567_03790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP567_03805 PF04463 Protein of unknown function (DUF523) NP567_03810 PF01554 MatE NP567_03815 PF01758 Sodium Bile acid symporter family NP567_03820 PF00857 Isochorismatase family NP567_03825 PF00701 Dihydrodipicolinate synthetase family NP567_03835 PF01259 SAICAR synthetase NP567_03845 PF01226 Formate/nitrite transporter NP567_03850 PF16193 AAA C-terminal domain NP567_03850 PF12002 MgsA AAA+ ATPase C terminal NP567_03850 PF00004 ATPase family associated with various cellular activities (AAA) NP567_03855 PF07995 Glucose / Sorbosone dehydrogenase NP567_03860 PF03692 Putative zinc- or iron-chelating domain NP567_03865 PF07043 Protein of unknown function (DUF1328) NP567_03880 PF10576 Iron-sulfur binding domain of endonuclease III NP567_03880 PF14815 NUDIX domain NP567_03880 PF00633 Helix-hairpin-helix motif NP567_03880 PF00730 HhH-GPD superfamily base excision DNA repair protein NP567_03900 PF08240 Alcohol dehydrogenase GroES-like domain NP567_03900 PF00107 Zinc-binding dehydrogenase NP567_03905 PF00155 Aminotransferase class I and II NP567_03905 PF00392 Bacterial regulatory proteins, gntR family NP567_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_03920 PF03466 LysR substrate binding domain NP567_03925 PF00248 Aldo/keto reductase family NP567_03930 PF07690 Major Facilitator Superfamily NP567_03940 PF05173 Dihydrodipicolinate reductase, C-terminus NP567_03940 PF01113 Dihydrodipicolinate reductase, N-terminus NP567_03950 PF00226 DnaJ domain NP567_03950 PF01556 DnaJ C terminal domain NP567_03950 PF00684 DnaJ central domain NP567_03960 PF00873 AcrB/AcrD/AcrF family NP567_03965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_03975 PF00311 Phosphoenolpyruvate carboxylase NP567_03980 PF00860 Permease family NP567_04000 PF00920 Dehydratase family NP567_04060 PF00579 tRNA synthetases class I (W and Y) NP567_04065 PF03702 Anhydro-N-acetylmuramic acid kinase NP567_04075 PF01521 Iron-sulphur cluster biosynthesis NP567_04095 PF00005 ABC transporter NP567_04095 PF12848 ABC transporter NP567_04110 PF00204 DNA gyrase B NP567_04110 PF00986 DNA gyrase B subunit, carboxyl terminus NP567_04110 PF18053 DNA gyrase B subunit insert domain NP567_04110 PF01751 Toprim domain NP567_04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_04115 PF02463 RecF/RecN/SMC N terminal domain NP567_04125 PF00308 Bacterial dnaA protein NP567_04125 PF08299 Bacterial dnaA protein helix-turn-helix NP567_04125 PF11638 DnaA N-terminal domain NP567_04130 PF00468 Ribosomal protein L34 NP567_04135 PF00825 Ribonuclease P NP567_04140 PF01809 Putative membrane protein insertion efficiency factor NP567_04145 PF02096 60Kd inner membrane protein NP567_04145 PF14849 YidC periplasmic domain NP567_04150 PF10396 GTP-binding protein TrmE N-terminus NP567_04150 PF01926 50S ribosome-binding GTPase NP567_04150 PF12631 MnmE helical domain NP567_04155 PF02583 Metal-sensitive transcriptional repressor NP567_04160 PF16916 Dimerisation domain of Zinc Transporter NP567_04160 PF01545 Cation efflux family NP567_04165 PF13098 Thioredoxin-like domain NP567_04165 PF10411 Disulfide bond isomerase protein N-terminus NP567_04175 PF00156 Phosphoribosyl transferase domain NP567_04180 PF01979 Amidohydrolase family NP567_04185 PF00355 Rieske [2Fe-2S] domain NP567_04190 PF03738 Glutathionylspermidine synthase preATP-grasp NP567_04200 PF03741 Integral membrane protein TerC family NP567_04205 PF01569 PAP2 superfamily NP567_04215 PF01225 Mur ligase family, catalytic domain NP567_04215 PF02875 Mur ligase family, glutamate ligase domain NP567_04215 PF08245 Mur ligase middle domain NP567_04225 PF00731 AIR carboxylase NP567_04235 PF13406 Transglycosylase SLT domain NP567_04260 PF01025 GrpE NP567_04265 PF03466 LysR substrate binding domain NP567_04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_04285 PF07859 alpha/beta hydrolase fold NP567_04290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP567_04330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_04335 PF01252 Signal peptidase (SPase) II NP567_04345 PF06574 FAD synthetase NP567_04345 PF01687 Riboflavin kinase NP567_04355 PF01048 Phosphorylase superfamily NP567_04360 PF00440 Bacterial regulatory proteins, tetR family NP567_04360 PF08362 YcdC-like protein, C-terminal region NP567_04365 PF00005 ABC transporter NP567_04370 PF00528 Binding-protein-dependent transport system inner membrane component NP567_04375 PF00296 Luciferase-like monooxygenase NP567_04380 PF09084 NMT1/THI5 like NP567_04410 PF13419 Haloacid dehalogenase-like hydrolase NP567_04420 PF01323 DSBA-like thioredoxin domain NP567_04430 PF00440 Bacterial regulatory proteins, tetR family NP567_04435 PF00175 Oxidoreductase NAD-binding domain NP567_04440 PF00487 Fatty acid desaturase NP567_04455 PF05506 Domain of unknown function (DUF756) NP567_04455 PF04185 Phosphoesterase family NP567_04465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NP567_04465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NP567_04470 PF01510 N-acetylmuramoyl-L-alanine amidase NP567_04475 PF03023 Lipid II flippase MurJ NP567_04480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP567_04480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_04485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP567_04485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_04490 PF02706 Chain length determinant protein NP567_04490 PF13807 G-rich domain on putative tyrosine kinase NP567_04490 PF13614 AAA domain NP567_04505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NP567_04505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NP567_04505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NP567_04520 PF02348 Cytidylyltransferase NP567_04535 PF08666 SAF domain NP567_04535 PF03102 NeuB family NP567_04545 PF07922 Glycosyltransferase family 52 NP567_04560 PF00535 Glycosyl transferase family 2 NP567_04565 PF02397 Bacterial sugar transferase NP567_04570 PF00483 Nucleotidyl transferase NP567_04580 PF00342 Phosphoglucose isomerase NP567_04585 PF16363 GDP-mannose 4,6 dehydratase NP567_04590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP567_04590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP567_04590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP567_04590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP567_04595 PF02652 L-lactate permease NP567_04605 PF01070 FMN-dependent dehydrogenase NP567_04610 PF01565 FAD binding domain NP567_04610 PF09330 D-lactate dehydrogenase, membrane binding NP567_04625 PF07729 FCD domain NP567_04625 PF00392 Bacterial regulatory proteins, gntR family NP567_04635 PF00285 Citrate synthase, C-terminal domain NP567_04640 PF00694 Aconitase C-terminal domain NP567_04640 PF00330 Aconitase family (aconitate hydratase) NP567_04730 PF00849 RNA pseudouridylate synthase NP567_04745 PF00593 TonB dependent receptor NP567_04745 PF07715 TonB-dependent Receptor Plug Domain NP567_04755 PF01037 Lrp/AsnC ligand binding domain NP567_04760 PF01266 FAD dependent oxidoreductase NP567_04765 PF01168 Alanine racemase, N-terminal domain NP567_04765 PF00842 Alanine racemase, C-terminal domain NP567_04770 PF01042 Endoribonuclease L-PSP NP567_04775 PF00324 Amino acid permease NP567_04780 PF00324 Amino acid permease NP567_04790 PF00171 Aldehyde dehydrogenase family NP567_04795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP567_04795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP567_04800 PF00501 AMP-binding enzyme NP567_04800 PF13193 AMP-binding enzyme C-terminal domain NP567_04805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_04805 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_04805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_04810 PF00378 Enoyl-CoA hydratase/isomerase NP567_04815 PF00378 Enoyl-CoA hydratase/isomerase NP567_04820 PF07690 Major Facilitator Superfamily NP567_04820 PF00083 Sugar (and other) transporter NP567_04825 PF00765 Autoinducer synthase NP567_04835 PF00196 Bacterial regulatory proteins, luxR family NP567_04835 PF03472 Autoinducer binding domain NP567_04845 PF16363 GDP-mannose 4,6 dehydratase NP567_04850 PF01648 4'-phosphopantetheinyl transferase superfamily NP567_04865 PF01722 BolA-like protein NP567_04875 PF13614 AAA domain NP567_04890 PF09335 SNARE associated Golgi protein NP567_04895 PF07681 DoxX NP567_04905 PF00117 Glutamine amidotransferase class-I NP567_04905 PF02540 NAD synthase NP567_04905 PF00958 GMP synthase C terminal domain NP567_04910 PF13427 Domain of unknown function (DUF4111) NP567_04910 PF01909 Nucleotidyltransferase domain NP567_04915 PF03551 Transcriptional regulator PadR-like family NP567_04925 PF02678 Pirin NP567_04925 PF05726 Pirin C-terminal cupin domain NP567_04945 PF03485 Arginyl tRNA synthetase N terminal domain NP567_04945 PF05746 DALR anticodon binding domain NP567_04945 PF00750 tRNA synthetases class I (R) NP567_04955 PF04261 Dyp-type peroxidase family NP567_04960 PF01810 LysE type translocator NP567_04970 PF00005 ABC transporter NP567_04990 PF00119 ATP synthase A chain NP567_04995 PF00137 ATP synthase subunit C NP567_05000 PF00430 ATP synthase B/B' CF(0) NP567_05005 PF00213 ATP synthase delta (OSCP) subunit NP567_05010 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP567_05010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP567_05010 PF00306 ATP synthase alpha/beta chain, C terminal domain NP567_05015 PF00231 ATP synthase NP567_05020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP567_05020 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP567_05025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NP567_05030 PF11008 Protein of unknown function (DUF2846) NP567_05040 PF00255 Glutathione peroxidase NP567_05050 PF07690 Major Facilitator Superfamily NP567_05055 PF00440 Bacterial regulatory proteins, tetR family NP567_05060 PF00892 EamA-like transporter family NP567_05065 PF01300 Telomere recombination NP567_05070 PF02481 DNA recombination-mediator protein A NP567_05070 PF17782 DprA winged helix domain NP567_05080 PF01327 Polypeptide deformylase NP567_05140 PF00291 Pyridoxal-phosphate dependent enzyme NP567_05150 PF03358 NADPH-dependent FMN reductase NP567_05170 PF11842 Domain of unknown function (DUF3362) NP567_05170 PF08497 Radical SAM N-terminal NP567_05170 PF04055 Radical SAM superfamily NP567_05190 PF00817 impB/mucB/samB family NP567_05190 PF11799 impB/mucB/samB family C-terminal domain NP567_05190 PF11798 IMS family HHH motif NP567_05200 PF07690 Major Facilitator Superfamily NP567_05205 PF03641 Possible lysine decarboxylase NP567_05210 PF03471 Transporter associated domain NP567_05210 PF03741 Integral membrane protein TerC family NP567_05220 PF03458 UPF0126 domain NP567_05225 PF07690 Major Facilitator Superfamily NP567_05235 PF00501 AMP-binding enzyme NP567_05235 PF13193 AMP-binding enzyme C-terminal domain NP567_05250 PF00719 Inorganic pyrophosphatase NP567_05255 PF03573 outer membrane porin, OprD family NP567_05270 PF00701 Dihydrodipicolinate synthetase family NP567_05295 PF00543 Nitrogen regulatory protein P-II NP567_05300 PF00909 Ammonium Transporter Family NP567_05305 PF03477 ATP cone domain NP567_05310 PF01872 RibD C-terminal domain NP567_05310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP567_05320 PF00677 Lumazine binding domain NP567_05350 PF03739 Lipopolysaccharide export system permease LptF/LptG NP567_05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_05370 PF00512 His Kinase A (phospho-acceptor) domain NP567_05375 PF00072 Response regulator receiver domain NP567_05375 PF00196 Bacterial regulatory proteins, luxR family NP567_05380 PF00768 D-alanyl-D-alanine carboxypeptidase NP567_05385 PF00291 Pyridoxal-phosphate dependent enzyme NP567_05390 PF00742 Homoserine dehydrogenase NP567_05390 PF03447 Homoserine dehydrogenase, NAD binding domain NP567_05390 PF01842 ACT domain NP567_05395 PF10411 Disulfide bond isomerase protein N-terminus NP567_05395 PF13098 Thioredoxin-like domain NP567_05410 PF07664 Ferrous iron transport protein B C terminus NP567_05410 PF02421 Ferrous iron transport protein B NP567_05410 PF07670 Nucleoside recognition NP567_05420 PF08245 Mur ligase middle domain NP567_05420 PF02875 Mur ligase family, glutamate ligase domain NP567_05425 PF01098 Cell cycle protein NP567_05435 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP567_05440 PF00149 Calcineurin-like phosphoesterase NP567_05445 PF00293 NUDIX domain NP567_05450 PF01964 Radical SAM ThiC family NP567_05450 PF13667 ThiC-associated domain NP567_05470 PF02321 Outer membrane efflux protein NP567_05475 PF01895 PhoU domain NP567_05480 PF04362 Bacterial Fe(2+) trafficking NP567_05495 PF04397 LytTr DNA-binding domain NP567_05495 PF00072 Response regulator receiver domain NP567_05500 PF03900 Porphobilinogen deaminase, C-terminal domain NP567_05500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NP567_05540 PF00263 Bacterial type II and III secretion system protein NP567_05540 PF03958 Bacterial type II/III secretion system short domain NP567_05545 PF12401 Protein of unknown function (DUF2662) NP567_05545 PF00498 FHA domain NP567_05550 PF13419 Haloacid dehalogenase-like hydrolase NP567_05580 PF00009 Elongation factor Tu GTP binding domain NP567_05580 PF03144 Elongation factor Tu domain 2 NP567_05580 PF03143 Elongation factor Tu C-terminal domain NP567_05590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NP567_05595 PF00467 KOW motif NP567_05595 PF02357 Transcription termination factor nusG NP567_05600 PF00298 Ribosomal protein L11, RNA binding domain NP567_05600 PF03946 Ribosomal protein L11, N-terminal domain NP567_05605 PF00687 Ribosomal protein L1p/L10e family NP567_05610 PF00466 Ribosomal protein L10 NP567_05615 PF00542 Ribosomal protein L7/L12 C-terminal domain NP567_05615 PF16320 Ribosomal protein L7/L12 dimerisation domain NP567_05620 PF04563 RNA polymerase beta subunit NP567_05620 PF04561 RNA polymerase Rpb2, domain 2 NP567_05620 PF04565 RNA polymerase Rpb2, domain 3 NP567_05620 PF10385 RNA polymerase beta subunit external 1 domain NP567_05620 PF00562 RNA polymerase Rpb2, domain 6 NP567_05620 PF04560 RNA polymerase Rpb2, domain 7 NP567_05625 PF04983 RNA polymerase Rpb1, domain 3 NP567_05625 PF00623 RNA polymerase Rpb1, domain 2 NP567_05625 PF04997 RNA polymerase Rpb1, domain 1 NP567_05625 PF04998 RNA polymerase Rpb1, domain 5 NP567_05625 PF05000 RNA polymerase Rpb1, domain 4 NP567_05645 PF00561 alpha/beta hydrolase fold NP567_05690 PF00376 MerR family regulatory protein NP567_05690 PF09278 MerR, DNA binding NP567_05725 PF02803 Thiolase, C-terminal domain NP567_05725 PF00108 Thiolase, N-terminal domain NP567_05730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP567_05730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP567_05730 PF00378 Enoyl-CoA hydratase/isomerase NP567_05745 PF02151 UvrB/uvrC motif NP567_05745 PF08459 UvrC Helix-hairpin-helix N-terminal NP567_05745 PF01541 GIY-YIG catalytic domain NP567_05755 PF01066 CDP-alcohol phosphatidyltransferase NP567_05760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP567_05760 PF12833 Helix-turn-helix domain NP567_05760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP567_05760 PF02805 Metal binding domain of Ada NP567_05785 PF13533 Biotin-lipoyl like NP567_05790 PF03652 Holliday junction resolvase NP567_05795 PF02622 Uncharacterized ACR, COG1678 NP567_05810 PF06865 Pyrimidine/purine nucleoside phosphorylase NP567_05815 PF00588 SpoU rRNA Methylase family NP567_05815 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP567_05825 PF01121 Dephospho-CoA kinase NP567_05830 PF06750 Bacterial Peptidase A24 N-terminal domain NP567_05830 PF01478 Type IV leader peptidase family NP567_05845 PF00121 Triosephosphate isomerase NP567_05850 PF03840 Preprotein translocase SecG subunit NP567_05870 PF17384 RimP C-terminal SH3 domain NP567_05870 PF02576 RimP N-terminal domain NP567_05875 PF13184 NusA-like KH domain NP567_05875 PF08529 NusA N-terminal domain NP567_05875 PF00575 S1 RNA binding domain NP567_05880 PF08364 Bacterial translation initiation factor IF-2 associated region NP567_05880 PF00009 Elongation factor Tu GTP binding domain NP567_05880 PF11987 Translation-initiation factor 2 NP567_05880 PF04760 Translation initiation factor IF-2, N-terminal region NP567_05885 PF02033 Ribosome-binding factor A NP567_05890 PF03334 Na+/H+ antiporter subunit NP567_05895 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NP567_05900 PF01899 Na+/H+ ion antiporter subunit NP567_05905 PF00361 Proton-conducting membrane transporter NP567_05910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP567_05915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP567_05915 PF00361 Proton-conducting membrane transporter NP567_05915 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NP567_05915 PF13244 Domain of unknown function (DUF4040) NP567_05940 PF03109 ABC1 family NP567_05950 PF01209 ubiE/COQ5 methyltransferase family NP567_05975 PF12705 PD-(D/E)XK nuclease superfamily NP567_05975 PF13361 UvrD-like helicase C-terminal domain NP567_05975 PF00580 UvrD/REP helicase N-terminal domain NP567_05990 PF00312 Ribosomal protein S15 NP567_06020 PF01430 Hsp33 protein NP567_06030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NP567_06030 PF18074 Primosomal protein N C-terminal domain NP567_06030 PF17764 3′ DNA-binding domain (3′BD) NP567_06030 PF00270 DEAD/DEAH box helicase NP567_06030 PF00271 Helicase conserved C-terminal domain NP567_06040 PF08334 Type II secretion system (T2SS), protein G NP567_06040 PF07963 Prokaryotic N-terminal methylation motif NP567_06050 PF01588 Putative tRNA binding domain NP567_06055 PF00795 Carbon-nitrogen hydrolase NP567_06060 PF03471 Transporter associated domain NP567_06060 PF00571 CBS domain NP567_06065 PF01206 Sulfurtransferase TusA NP567_06085 PF01177 Asp/Glu/Hydantoin racemase NP567_06095 PF00762 Ferrochelatase NP567_06100 PF00753 Metallo-beta-lactamase superfamily NP567_06105 PF03884 DNA gyrase inhibitor YacG NP567_06115 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP567_06115 PF13247 4Fe-4S dicluster domain NP567_06115 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_06125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NP567_06135 PF01197 Ribosomal protein L31 NP567_06140 PF03109 ABC1 family NP567_06145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NP567_06145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_06150 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NP567_06150 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_06150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_06165 PF04055 Radical SAM superfamily NP567_06165 PF06969 HemN C-terminal domain NP567_06200 PF00849 RNA pseudouridylate synthase NP567_06200 PF01479 S4 domain NP567_06205 PF13419 Haloacid dehalogenase-like hydrolase NP567_06210 PF08279 HTH domain NP567_06210 PF13280 WYL domain NP567_06215 PF02798 Glutathione S-transferase, N-terminal domain NP567_06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_06225 PF03466 LysR substrate binding domain NP567_06230 PF12706 Beta-lactamase superfamily domain NP567_06240 PF00391 PEP-utilising enzyme, mobile domain NP567_06240 PF01590 GAF domain NP567_06240 PF05524 PEP-utilising enzyme, N-terminal NP567_06240 PF02896 PEP-utilising enzyme, TIM barrel domain NP567_06245 PF00293 NUDIX domain NP567_06270 PF00694 Aconitase C-terminal domain NP567_06280 PF00180 Isocitrate/isopropylmalate dehydrogenase NP567_06295 PF01176 Translation initiation factor 1A / IF-1 NP567_06305 PF01416 tRNA pseudouridine synthase NP567_06325 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP567_06325 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP567_06335 PF00375 Sodium:dicarboxylate symporter family NP567_06360 PF04102 SlyX NP567_06365 PF00107 Zinc-binding dehydrogenase NP567_06365 PF08240 Alcohol dehydrogenase GroES-like domain NP567_06370 PF01638 HxlR-like helix-turn-helix NP567_06380 PF01751 Toprim domain NP567_06380 PF01396 Topoisomerase DNA binding C4 zinc finger NP567_06380 PF01131 DNA topoisomerase NP567_06380 PF08272 Topoisomerase I zinc-ribbon-like NP567_06400 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NP567_06420 PF00872 Transposase, Mutator family NP567_06430 PF00471 Ribosomal protein L33 NP567_06435 PF00830 Ribosomal L28 family NP567_06440 PF00171 Aldehyde dehydrogenase family NP567_06450 PF01842 ACT domain NP567_06450 PF00551 Formyl transferase NP567_06460 PF01618 MotA/TolQ/ExbB proton channel family NP567_06470 PF01625 Peptide methionine sulfoxide reductase NP567_06480 PF00186 Dihydrofolate reductase NP567_06500 PF01790 Prolipoprotein diacylglyceryl transferase NP567_06520 PF00902 Sec-independent protein translocase protein (TatC) NP567_06525 PF02416 mttA/Hcf106 family NP567_06530 PF02416 mttA/Hcf106 family NP567_06540 PF01725 Ham1 family NP567_06550 PF07021 Methionine biosynthesis protein MetW NP567_06550 PF00561 alpha/beta hydrolase fold NP567_06555 PF00561 alpha/beta hydrolase fold NP567_06560 PF08502 LeuA allosteric (dimerisation) domain NP567_06560 PF00682 HMGL-like NP567_06565 PF13640 2OG-Fe(II) oxygenase superfamily NP567_06565 PF18331 PKHD-type hydroxylase C-terminal domain NP567_06575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_06575 PF05698 Bacterial trigger factor protein (TF) C-terminus NP567_06575 PF05697 Bacterial trigger factor protein (TF) NP567_06580 PF00574 Clp protease NP567_06585 PF07724 AAA domain (Cdc48 subfamily) NP567_06585 PF10431 C-terminal, D2-small domain, of ClpB protein NP567_06585 PF06689 ClpX C4-type zinc finger NP567_06600 PF05681 Fumarate hydratase (Fumerase) NP567_06600 PF05683 Fumarase C-terminus NP567_06605 PF07085 DRTGG domain NP567_06605 PF01515 Phosphate acetyl/butaryl transferase NP567_06610 PF00871 Acetokinase family NP567_06620 PF01081 KDPG and KHG aldolase NP567_06630 PF01202 Shikimate kinase NP567_06635 PF00171 Aldehyde dehydrogenase family NP567_06640 PF00171 Aldehyde dehydrogenase family NP567_06645 PF00561 alpha/beta hydrolase fold NP567_06655 PF00933 Glycosyl hydrolase family 3 N terminal domain NP567_06660 PF11818 C-terminal domain of tail specific protease (DUF3340) NP567_06660 PF00595 PDZ domain NP567_06660 PF03572 Peptidase family S41 NP567_06660 PF17804 Tail specific protease N-terminal domain NP567_06665 PF13439 Glycosyltransferase Family 4 NP567_06665 PF00534 Glycosyl transferases group 1 NP567_06670 PF01569 PAP2 superfamily NP567_06675 PF04384 Iron-sulphur cluster assembly NP567_06680 PF00334 Nucleoside diphosphate kinase NP567_06695 PF13464 Domain of unknown function (DUF4115) NP567_06700 PF04551 GcpE protein NP567_06705 PF13393 Histidyl-tRNA synthetase NP567_06705 PF03129 Anticodon binding domain NP567_06715 PF13360 PQQ-like domain NP567_06720 PF01926 50S ribosome-binding GTPase NP567_06720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NP567_06735 PF00550 Phosphopantetheine attachment site NP567_06740 PF00550 Phosphopantetheine attachment site NP567_06755 PF00535 Glycosyl transferase family 2 NP567_06765 PF00221 Aromatic amino acid lyase NP567_06825 PF02556 Preprotein translocase subunit SecB NP567_06830 PF00462 Glutaredoxin NP567_06840 PF03193 RsgA GTPase NP567_06860 PF02321 Outer membrane efflux protein NP567_06865 PF00005 ABC transporter NP567_06865 PF02687 FtsX-like permease family NP567_06865 PF12704 MacB-like periplasmic core domain NP567_06870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_06895 PF00205 Thiamine pyrophosphate enzyme, central domain NP567_06895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP567_06895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP567_06900 PF10369 Small subunit of acetolactate synthase NP567_06905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NP567_06905 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NP567_06910 PF00563 EAL domain NP567_06910 PF00990 Diguanylate cyclase, GGDEF domain NP567_06910 PF03707 Bacterial signalling protein N terminal repeat NP567_06955 PF00009 Elongation factor Tu GTP binding domain NP567_06955 PF03144 Elongation factor Tu domain 2 NP567_06955 PF16658 Class II release factor RF3, C-terminal domain NP567_06970 PF01026 TatD related DNase NP567_06980 PF00899 ThiF family NP567_06990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_06990 PF03466 LysR substrate binding domain NP567_07005 PF07690 Major Facilitator Superfamily NP567_07015 PF00892 EamA-like transporter family NP567_07025 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NP567_07030 PF02233 NAD(P) transhydrogenase beta subunit NP567_07035 PF00106 short chain dehydrogenase NP567_07045 PF01261 Xylose isomerase-like TIM barrel NP567_07050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP567_07050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP567_07055 PF00378 Enoyl-CoA hydratase/isomerase NP567_07065 PF00291 Pyridoxal-phosphate dependent enzyme NP567_07080 PF13291 ACT domain NP567_07080 PF04607 Region found in RelA / SpoT proteins NP567_07080 PF02824 TGS domain NP567_07090 PF03819 MazG nucleotide pyrophosphohydrolase domain NP567_07100 PF01743 Poly A polymerase head domain NP567_07100 PF12626 Polymerase A arginine-rich C-terminus NP567_07100 PF12627 Probable RNA and SrmB- binding site of polymerase A NP567_07110 PF02548 Ketopantoate hydroxymethyltransferase NP567_07115 PF02569 Pantoate-beta-alanine ligase NP567_07120 PF03668 P-loop ATPase protein family NP567_07125 PF00381 PTS HPr component phosphorylation site NP567_07130 PF04751 Protein of unknown function (DUF615) NP567_07135 PF00501 AMP-binding enzyme NP567_07135 PF13193 AMP-binding enzyme C-terminal domain NP567_07140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP567_07140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP567_07140 PF02824 TGS domain NP567_07140 PF03129 Anticodon binding domain NP567_07145 PF00707 Translation initiation factor IF-3, C-terminal domain NP567_07145 PF05198 Translation initiation factor IF-3, N-terminal domain NP567_07150 PF00043 Glutathione S-transferase, C-terminal domain NP567_07150 PF02798 Glutathione S-transferase, N-terminal domain NP567_07155 PF09335 SNARE associated Golgi protein NP567_07160 PF07690 Major Facilitator Superfamily NP567_07170 PF01632 Ribosomal protein L35 NP567_07205 PF00216 Bacterial DNA-binding protein NP567_07220 PF07498 Rho termination factor, N-terminal domain NP567_07220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP567_07220 PF07497 Rho termination factor, RNA-binding domain NP567_07225 PF00085 Thioredoxin NP567_07230 PF02541 Ppx/GppA phosphatase family NP567_07235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NP567_07245 PF03807 NADP oxidoreductase coenzyme F420-dependent NP567_07245 PF14748 Pyrroline-5-carboxylate reductase dimerisation NP567_07250 PF02325 YGGT family NP567_07255 PF00476 DNA polymerase family A NP567_07255 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP567_07255 PF01367 5'-3' exonuclease, C-terminal SAM fold NP567_07255 PF01612 3'-5' exonuclease NP567_07275 PF00437 Type II/IV secretion system protein NP567_07280 PF02566 OsmC-like protein NP567_07295 PF00795 Carbon-nitrogen hydrolase NP567_07340 PF00309 Sigma-54 factor, Activator interacting domain (AID) NP567_07340 PF04963 Sigma-54 factor, core binding domain NP567_07340 PF04552 Sigma-54, DNA binding domain NP567_07345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP567_07350 PF01722 BolA-like protein NP567_07355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP567_07360 PF01634 ATP phosphoribosyltransferase NP567_07365 PF00815 Histidinol dehydrogenase NP567_07370 PF00155 Aminotransferase class I and II NP567_07375 PF00425 chorismate binding enzyme NP567_07375 PF04715 Anthranilate synthase component I, N terminal region NP567_07400 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_07405 PF00814 Glycoprotease family NP567_07420 PF00756 Putative esterase NP567_07430 PF00834 Ribulose-phosphate 3 epimerase family NP567_07445 PF07731 Multicopper oxidase NP567_07445 PF07732 Multicopper oxidase NP567_07445 PF00394 Multicopper oxidase NP567_07460 PF00893 Small Multidrug Resistance protein NP567_07465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP567_07465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP567_07470 PF01960 ArgJ family NP567_07475 PF02445 Quinolinate synthetase A protein NP567_07500 PF00962 Adenosine/AMP deaminase NP567_07505 PF08240 Alcohol dehydrogenase GroES-like domain NP567_07505 PF00107 Zinc-binding dehydrogenase NP567_07515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_07515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_07515 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_07520 PF07690 Major Facilitator Superfamily NP567_07525 PF02515 CoA-transferase family III NP567_07535 PF14537 Cytochrome c3 NP567_07535 PF00890 FAD binding domain NP567_07550 PF07690 Major Facilitator Superfamily NP567_07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_07555 PF03466 LysR substrate binding domain NP567_07565 PF07687 Peptidase dimerisation domain NP567_07565 PF01546 Peptidase family M20/M25/M40 NP567_07570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP567_07570 PF12833 Helix-turn-helix domain NP567_07580 PF01810 LysE type translocator NP567_07595 PF01717 Cobalamin-independent synthase, Catalytic domain NP567_07595 PF08267 Cobalamin-independent synthase, N-terminal domain NP567_07600 PF01613 Flavin reductase like domain NP567_07615 PF17074 Darcynin, domain of unknown function NP567_07630 PF00268 Ribonucleotide reductase, small chain NP567_07640 PF03477 ATP cone domain NP567_07640 PF02867 Ribonucleotide reductase, barrel domain NP567_07640 PF00317 Ribonucleotide reductase, all-alpha domain NP567_07650 PF00072 Response regulator receiver domain NP567_07650 PF00486 Transcriptional regulatory protein, C terminal NP567_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_07655 PF00672 HAMP domain NP567_07655 PF00512 His Kinase A (phospho-acceptor) domain NP567_07675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NP567_07695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP567_07695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NP567_07695 PF00384 Molybdopterin oxidoreductase NP567_07700 PF00146 NADH dehydrogenase NP567_07705 PF12838 4Fe-4S dicluster domain NP567_07710 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NP567_07715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP567_07720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP567_07720 PF00361 Proton-conducting membrane transporter NP567_07730 PF00361 Proton-conducting membrane transporter NP567_07740 PF00313 'Cold-shock' DNA-binding domain NP567_07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_07750 PF03466 LysR substrate binding domain NP567_07755 PF00970 Oxidoreductase FAD-binding domain NP567_07755 PF00175 Oxidoreductase NAD-binding domain NP567_07770 PF05552 Conserved TM helix NP567_07785 PF00291 Pyridoxal-phosphate dependent enzyme NP567_07790 PF13533 Biotin-lipoyl like NP567_07825 PF10609 NUBPL iron-transfer P-loop NTPase NP567_07845 PF00692 dUTPase NP567_07875 PF01207 Dihydrouridine synthase (Dus) NP567_07885 PF00448 SRP54-type protein, GTPase domain NP567_07885 PF02978 Signal peptide binding domain NP567_07885 PF02881 SRP54-type protein, helical bundle domain NP567_07890 PF03309 Type III pantothenate kinase NP567_07900 PF01925 Sulfite exporter TauE/SafE NP567_07920 PF00533 BRCA1 C Terminus (BRCT) domain NP567_07920 PF01653 NAD-dependent DNA ligase adenylation domain NP567_07920 PF03120 NAD-dependent DNA ligase OB-fold domain NP567_07920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NP567_07920 PF12826 Helix-hairpin-helix motif NP567_07925 PF00210 Ferritin-like domain NP567_07930 PF07690 Major Facilitator Superfamily NP567_07935 PF00982 Glycosyltransferase family 20 NP567_07970 PF01479 S4 domain NP567_07970 PF00849 RNA pseudouridylate synthase NP567_07980 PF02616 Segregation and condensation protein ScpA NP567_07985 PF01300 Telomere recombination NP567_07990 PF04315 Elongation factor P hydroxylase NP567_07995 PF02620 Large ribosomal RNA subunit accumulation protein YceD NP567_08000 PF01783 Ribosomal L32p protein family NP567_08005 PF00698 Acyl transferase domain NP567_08015 PF00550 Phosphopantetheine attachment site NP567_08020 PF01476 LysM domain NP567_08020 PF04972 BON domain NP567_08025 PF02581 Thiamine monophosphate synthase NP567_08025 PF03070 TENA/THI-4/PQQC family NP567_08025 PF08543 Phosphomethylpyrimidine kinase NP567_08050 PF02261 Aspartate decarboxylase NP567_08055 PF01195 Peptidyl-tRNA hydrolase NP567_08060 PF01386 Ribosomal L25p family NP567_08065 PF14572 Phosphoribosyl synthetase-associated domain NP567_08065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP567_08090 PF08544 GHMP kinases C terminal NP567_08090 PF00288 GHMP kinases N terminal domain NP567_08105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NP567_08105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NP567_08105 PF01488 Shikimate / quinate 5-dehydrogenase NP567_08120 PF00849 RNA pseudouridylate synthase NP567_08120 PF01479 S4 domain NP567_08125 PF02578 Multi-copper polyphenol oxidoreductase laccase NP567_08130 PF03358 NADPH-dependent FMN reductase NP567_08135 PF01668 SmpB protein NP567_08140 PF01467 Cytidylyltransferase-like NP567_08145 PF00037 4Fe-4S binding domain NP567_08175 PF02028 BCCT, betaine/carnitine/choline family transporter NP567_08180 PF07859 alpha/beta hydrolase fold NP567_08185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP567_08185 PF00355 Rieske [2Fe-2S] domain NP567_08190 PF00171 Aldehyde dehydrogenase family NP567_08210 PF00795 Carbon-nitrogen hydrolase NP567_08210 PF02540 NAD synthase NP567_08220 PF02678 Pirin NP567_08220 PF05726 Pirin C-terminal cupin domain NP567_08225 PF03653 Uncharacterised protein family (UPF0093) NP567_08230 PF00109 Beta-ketoacyl synthase, N-terminal domain NP567_08230 PF02801 Beta-ketoacyl synthase, C-terminal domain NP567_08240 PF00164 Ribosomal protein S12/S23 NP567_08250 PF00679 Elongation factor G C-terminus NP567_08250 PF14492 Elongation Factor G, domain II NP567_08250 PF00009 Elongation factor Tu GTP binding domain NP567_08250 PF03144 Elongation factor Tu domain 2 NP567_08250 PF03764 Elongation factor G, domain IV NP567_08255 PF03143 Elongation factor Tu C-terminal domain NP567_08255 PF00009 Elongation factor Tu GTP binding domain NP567_08255 PF03144 Elongation factor Tu domain 2 NP567_08270 PF00583 Acetyltransferase (GNAT) family NP567_08280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NP567_08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_08305 PF03776 Septum formation topological specificity factor MinE NP567_08310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NP567_08315 PF03775 Septum formation inhibitor MinC, C-terminal domain NP567_08330 PF13488 Glycine zipper NP567_08330 PF00691 OmpA family NP567_08335 PF00580 UvrD/REP helicase N-terminal domain NP567_08335 PF13361 UvrD-like helicase C-terminal domain NP567_08340 PF00692 dUTPase NP567_08345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP567_08345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP567_08345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP567_08345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP567_08350 PF00696 Amino acid kinase family NP567_08360 PF13230 Glutamine amidotransferases class-II NP567_08365 PF01814 Hemerythrin HHE cation binding domain NP567_08375 PF03658 RnfH family Ubiquitin NP567_08380 PF04355 SmpA / OmlA family NP567_08385 PF01475 Ferric uptake regulator family NP567_08390 PF00437 Type II/IV secretion system protein NP567_08395 PF00437 Type II/IV secretion system protein NP567_08400 PF01168 Alanine racemase, N-terminal domain NP567_08410 PF12320 Type 5 capsule protein repressor C-terminal domain NP567_08410 PF00149 Calcineurin-like phosphoesterase NP567_08430 PF08338 Domain of unknown function (DUF1731) NP567_08430 PF01370 NAD dependent epimerase/dehydratase family NP567_08435 PF01266 FAD dependent oxidoreductase NP567_08440 PF00490 Delta-aminolevulinic acid dehydratase NP567_08445 PF03061 Thioesterase superfamily NP567_08455 PF07690 Major Facilitator Superfamily NP567_08470 PF13356 Arm DNA-binding domain NP567_08470 PF00589 Phage integrase family NP567_08510 PF00436 Single-strand binding protein family NP567_08575 PF00083 Sugar (and other) transporter NP567_08580 PF00701 Dihydrodipicolinate synthetase family NP567_08610 PF02574 Homocysteine S-methyltransferase NP567_08620 PF06039 Malate:quinone oxidoreductase (Mqo) NP567_08625 PF05199 GMC oxidoreductase NP567_08625 PF00732 GMC oxidoreductase NP567_08630 PF00171 Aldehyde dehydrogenase family NP567_08635 PF13977 BetI-type transcriptional repressor, C-terminal NP567_08635 PF00440 Bacterial regulatory proteins, tetR family NP567_08640 PF02028 BCCT, betaine/carnitine/choline family transporter NP567_08645 PF02028 BCCT, betaine/carnitine/choline family transporter NP567_08655 PF03061 Thioesterase superfamily NP567_08665 PF07683 Cobalamin synthesis protein cobW C-terminal domain NP567_08665 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP567_08670 PF00375 Sodium:dicarboxylate symporter family NP567_08675 PF07152 YaeQ protein NP567_08680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_08685 PF14883 Hypothetical glycosyl hydrolase family 13 NP567_08685 PF01522 Polysaccharide deacetylase NP567_08690 PF00535 Glycosyl transferase family 2 NP567_08715 PF09339 IclR helix-turn-helix domain NP567_08715 PF01614 Bacterial transcriptional regulator NP567_08740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP567_08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_08745 PF14759 Reductase C-terminal NP567_08765 PF00171 Aldehyde dehydrogenase family NP567_08770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP567_08770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP567_08770 PF00205 Thiamine pyrophosphate enzyme, central domain NP567_08780 PF07690 Major Facilitator Superfamily NP567_08785 PF01327 Polypeptide deformylase NP567_08795 PF02311 AraC-like ligand binding domain NP567_08795 PF12833 Helix-turn-helix domain NP567_08800 PF07690 Major Facilitator Superfamily NP567_08810 PF01263 Aldose 1-epimerase NP567_08820 PF03466 LysR substrate binding domain NP567_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_08835 PF00456 Transketolase, thiamine diphosphate binding domain NP567_08840 PF02780 Transketolase, C-terminal domain NP567_08840 PF02779 Transketolase, pyrimidine binding domain NP567_08850 PF01384 Phosphate transporter family NP567_08885 PF01521 Iron-sulphur cluster biosynthesis NP567_08885 PF01106 NifU-like domain NP567_08890 PF00593 TonB dependent receptor NP567_08890 PF07715 TonB-dependent Receptor Plug Domain NP567_08900 PF00561 alpha/beta hydrolase fold NP567_08905 PF00484 Carbonic anhydrase NP567_08915 PF00005 ABC transporter NP567_08925 PF01694 Rhomboid family NP567_08930 PF00912 Transglycosylase NP567_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_08950 PF03466 LysR substrate binding domain NP567_08955 PF00561 alpha/beta hydrolase fold NP567_08965 PF00301 Rubredoxin NP567_08980 PF01336 OB-fold nucleic acid binding domain NP567_08980 PF00152 tRNA synthetases class II (D, K and N) NP567_08985 PF14052 Capsule assembly protein Wzi NP567_08995 PF01507 Phosphoadenosine phosphosulfate reductase family NP567_09000 PF00009 Elongation factor Tu GTP binding domain NP567_09015 PF03600 Citrate transporter NP567_09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_09025 PF03466 LysR substrate binding domain NP567_09030 PF00463 Isocitrate lyase family NP567_09050 PF00547 Urease, gamma subunit NP567_09055 PF00699 Urease beta subunit NP567_09070 PF02814 UreE urease accessory protein, N-terminal domain NP567_09070 PF05194 UreE urease accessory protein, C-terminal domain NP567_09075 PF01730 UreF NP567_09080 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP567_09110 PF05191 Adenylate kinase, active site lid NP567_09120 PF10576 Iron-sulfur binding domain of endonuclease III NP567_09120 PF00730 HhH-GPD superfamily base excision DNA repair protein NP567_09120 PF00633 Helix-hairpin-helix motif NP567_09125 PF04060 Putative Fe-S cluster NP567_09140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NP567_09145 PF02590 Predicted SPOUT methyltransferase NP567_09150 PF05362 Lon protease (S16) C-terminal proteolytic domain NP567_09150 PF02190 ATP-dependent protease La (LON) substrate-binding domain NP567_09150 PF00004 ATPase family associated with various cellular activities (AAA) NP567_09160 PF00691 OmpA family NP567_09160 PF04355 SmpA / OmlA family NP567_09230 PF00929 Exonuclease NP567_09265 PF00717 Peptidase S24-like NP567_09265 PF01381 Helix-turn-helix NP567_09310 PF00145 C-5 cytosine-specific DNA methylase NP567_09320 PF01695 IstB-like ATP binding protein NP567_09390 PF07007 Lysozyme inhibitor LprI NP567_09560 PF00712 DNA polymerase III beta subunit, N-terminal domain NP567_09560 PF02767 DNA polymerase III beta subunit, central domain NP567_09560 PF02768 DNA polymerase III beta subunit, C-terminal domain NP567_09620 PF11798 IMS family HHH motif NP567_09620 PF11799 impB/mucB/samB family C-terminal domain NP567_09620 PF00817 impB/mucB/samB family NP567_09620 PF13438 Domain of unknown function (DUF4113) NP567_09640 PF13737 Transposase DDE domain NP567_09670 PF05195 Aminopeptidase P, N-terminal domain NP567_09670 PF00557 Metallopeptidase family M24 NP567_09675 PF01494 FAD binding domain NP567_09680 PF01494 FAD binding domain NP567_09690 PF13411 MerR HTH family regulatory protein NP567_09700 PF01810 LysE type translocator NP567_09705 PF03466 LysR substrate binding domain NP567_09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_09715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP567_09720 PF02021 Uncharacterised protein family UPF0102 NP567_09725 PF04972 BON domain NP567_09735 PF00293 NUDIX domain NP567_09735 PF09297 NADH pyrophosphatase zinc ribbon domain NP567_09745 PF00929 Exonuclease NP567_09750 PF01464 Transglycosylase SLT domain NP567_09750 PF01464 Transglycosylase SLT domain NP567_09750 PF01476 LysM domain NP567_09750 PF01476 LysM domain NP567_09755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP567_09765 PF00528 Binding-protein-dependent transport system inner membrane component NP567_09765 PF12911 N-terminal TM domain of oligopeptide transport permease C NP567_09770 PF00005 ABC transporter NP567_09770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP567_09775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_09780 PF07715 TonB-dependent Receptor Plug Domain NP567_09780 PF00593 TonB dependent receptor NP567_09795 PF01979 Amidohydrolase family NP567_09805 PF00764 Arginosuccinate synthase NP567_09815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_09815 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_09870 PF01042 Endoribonuclease L-PSP NP567_09875 PF01266 FAD dependent oxidoreductase NP567_09880 PF01266 FAD dependent oxidoreductase NP567_09895 PF03180 NLPA lipoprotein NP567_09925 PF00324 Amino acid permease NP567_09945 PF00392 Bacterial regulatory proteins, gntR family NP567_09945 PF07729 FCD domain NP567_09955 PF00171 Aldehyde dehydrogenase family NP567_09965 PF00202 Aminotransferase class-III NP567_09970 PF04958 Arginine N-succinyltransferase beta subunit NP567_10000 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP567_10000 PF12833 Helix-turn-helix domain NP567_10005 PF00892 EamA-like transporter family NP567_10010 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NP567_10010 PF08666 SAF domain NP567_10015 PF07690 Major Facilitator Superfamily NP567_10020 PF13378 Enolase C-terminal domain-like NP567_10025 PF00701 Dihydrodipicolinate synthetase family NP567_10030 PF00171 Aldehyde dehydrogenase family NP567_10035 PF07729 FCD domain NP567_10035 PF00392 Bacterial regulatory proteins, gntR family NP567_10040 PF07519 Tannase and feruloyl esterase NP567_10055 PF03573 outer membrane porin, OprD family NP567_10060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_10060 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_10060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_10070 PF00171 Aldehyde dehydrogenase family NP567_10075 PF00378 Enoyl-CoA hydratase/isomerase NP567_10095 PF00175 Oxidoreductase NAD-binding domain NP567_10095 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_10120 PF07859 alpha/beta hydrolase fold NP567_10125 PF00106 short chain dehydrogenase NP567_10130 PF00743 Flavin-binding monooxygenase-like NP567_10135 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP567_10135 PF12833 Helix-turn-helix domain NP567_10140 PF04072 Leucine carboxyl methyltransferase NP567_10145 PF00743 Flavin-binding monooxygenase-like NP567_10150 PF00106 short chain dehydrogenase NP567_10160 PF17932 Tetracyclin repressor-like, C-terminal domain NP567_10160 PF00440 Bacterial regulatory proteins, tetR family NP567_10165 PF02678 Pirin NP567_10165 PF17954 Quercetinase C-terminal cupin domain NP567_10175 PF00106 short chain dehydrogenase NP567_10180 PF00743 Flavin-binding monooxygenase-like NP567_10190 PF00860 Permease family NP567_10195 PF00962 Adenosine/AMP deaminase NP567_10200 PF01292 Prokaryotic cytochrome b561 NP567_10210 PF01351 Ribonuclease HII NP567_10215 PF02599 Global regulator protein family NP567_10220 PF00696 Amino acid kinase family NP567_10220 PF13840 ACT domain NP567_10220 PF01842 ACT domain NP567_10225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP567_10225 PF01411 tRNA synthetases class II (A) NP567_10225 PF02272 DHHA1 domain NP567_10230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP567_10230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP567_10235 PF13393 Histidyl-tRNA synthetase NP567_10240 PF00709 Adenylosuccinate synthetase NP567_10255 PF00248 Aldo/keto reductase family NP567_10260 PF00027 Cyclic nucleotide-binding domain NP567_10260 PF13545 Crp-like helix-turn-helix domain NP567_10270 PF02566 OsmC-like protein NP567_10285 PF00004 ATPase family associated with various cellular activities (AAA) NP567_10285 PF07724 AAA domain (Cdc48 subfamily) NP567_10285 PF17871 AAA lid domain NP567_10285 PF02861 Clp amino terminal domain, pathogenicity island component NP567_10285 PF10431 C-terminal, D2-small domain, of ClpB protein NP567_10300 PF02926 THUMP domain NP567_10300 PF01170 Putative RNA methylase family UPF0020 NP567_10300 PF10672 S-adenosylmethionine-dependent methyltransferase NP567_10310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP567_10310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP567_10315 PF01979 Amidohydrolase family NP567_10320 PF00691 OmpA family NP567_10320 PF13488 Glycine zipper NP567_10335 PF02390 Putative methyltransferase NP567_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_10355 PF13192 Thioredoxin domain NP567_10375 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP567_10375 PF00578 AhpC/TSA family NP567_10385 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP567_10385 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP567_10405 PF00106 short chain dehydrogenase NP567_10410 PF00175 Oxidoreductase NAD-binding domain NP567_10410 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_10410 PF00970 Oxidoreductase FAD-binding domain NP567_10415 PF00866 Ring hydroxylating beta subunit NP567_10420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP567_10420 PF00355 Rieske [2Fe-2S] domain NP567_10425 PF03466 LysR substrate binding domain NP567_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_10440 PF00376 MerR family regulatory protein NP567_10440 PF09278 MerR, DNA binding NP567_10475 PF02601 Exonuclease VII, large subunit NP567_10475 PF13742 OB-fold nucleic acid binding domain NP567_10505 PF01810 LysE type translocator NP567_10545 PF07690 Major Facilitator Superfamily NP567_10550 PF01638 HxlR-like helix-turn-helix NP567_10595 PF03968 OstA-like protein NP567_10600 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP567_10600 PF00005 ABC transporter NP567_10605 PF02321 Outer membrane efflux protein NP567_10625 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_10635 PF01596 O-methyltransferase NP567_10645 PF11953 Domain of unknown function (DUF3470) NP567_10645 PF00037 4Fe-4S binding domain NP567_10655 PF00488 MutS domain V NP567_10655 PF05188 MutS domain II NP567_10655 PF05192 MutS domain III NP567_10655 PF05190 MutS family domain IV NP567_10655 PF01624 MutS domain I NP567_10660 PF01037 Lrp/AsnC ligand binding domain NP567_10665 PF00892 EamA-like transporter family NP567_10680 PF01544 CorA-like Mg2+ transporter protein NP567_10720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP567_10720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP567_10740 PF13419 Haloacid dehalogenase-like hydrolase NP567_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_10755 PF03466 LysR substrate binding domain NP567_10765 PF03746 LamB/YcsF family NP567_10770 PF07286 Protein of unknown function (DUF1445) NP567_10780 PF02785 Biotin carboxylase C-terminal domain NP567_10780 PF00289 Biotin carboxylase, N-terminal domain NP567_10780 PF00364 Biotin-requiring enzyme NP567_10780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP567_10785 PF00654 Voltage gated chloride channel NP567_10790 PF00226 DnaJ domain NP567_10790 PF01556 DnaJ C terminal domain NP567_10790 PF00684 DnaJ central domain NP567_10795 PF00440 Bacterial regulatory proteins, tetR family NP567_10805 PF13823 Alcohol dehydrogenase GroES-associated NP567_10805 PF08240 Alcohol dehydrogenase GroES-like domain NP567_10805 PF00107 Zinc-binding dehydrogenase NP567_10820 PF02785 Biotin carboxylase C-terminal domain NP567_10820 PF00289 Biotin carboxylase, N-terminal domain NP567_10820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP567_10825 PF02525 Flavodoxin-like fold NP567_10830 PF01638 HxlR-like helix-turn-helix NP567_10855 PF08753 NikR C terminal nickel binding domain NP567_10855 PF01402 Ribbon-helix-helix protein, copG family NP567_10865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP567_10870 PF00005 ABC transporter NP567_10885 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NP567_10885 PF13296 Putative type VI secretion system Rhs element Vgr NP567_10885 PF04717 Type VI secretion system, phage-baseplate injector NP567_10900 PF03781 Sulfatase-modifying factor enzyme 1 NP567_10915 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NP567_10930 PF05947 Type VI secretion system, TssF NP567_10945 PF14331 ImcF-related N-terminal domain NP567_10945 PF06761 Intracellular multiplication and human macrophage-killing NP567_10945 PF06744 Type VI secretion protein IcmF C-terminal NP567_10970 PF00004 ATPase family associated with various cellular activities (AAA) NP567_10970 PF07724 AAA domain (Cdc48 subfamily) NP567_10970 PF17871 AAA lid domain NP567_10970 PF10431 C-terminal, D2-small domain, of ClpB protein NP567_10975 PF06812 ImpA, N-terminal, type VI secretion system NP567_10980 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NP567_11000 PF03466 LysR substrate binding domain NP567_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP567_11015 PF07690 Major Facilitator Superfamily NP567_11030 PF02677 Epoxyqueuosine reductase QueH NP567_11040 PF00376 MerR family regulatory protein NP567_11040 PF09278 MerR, DNA binding NP567_11060 PF00392 Bacterial regulatory proteins, gntR family NP567_11065 PF05544 Proline racemase NP567_11070 PF01266 FAD dependent oxidoreductase NP567_11090 PF00083 Sugar (and other) transporter NP567_11095 PF00171 Aldehyde dehydrogenase family NP567_11100 PF13520 Amino acid permease NP567_11110 PF00171 Aldehyde dehydrogenase family NP567_11110 PF01575 MaoC like domain NP567_11115 PF05138 Phenylacetic acid catabolic protein NP567_11120 PF06243 Phenylacetic acid degradation B NP567_11125 PF05138 Phenylacetic acid catabolic protein NP567_11130 PF01883 Iron-sulfur cluster assembly protein NP567_11135 PF00970 Oxidoreductase FAD-binding domain NP567_11135 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_11135 PF00175 Oxidoreductase NAD-binding domain NP567_11160 PF14535 AMP-binding enzyme C-terminal domain NP567_11160 PF00501 AMP-binding enzyme NP567_11165 PF07848 PaaX-like protein NP567_11165 PF08223 PaaX-like protein C-terminal domain NP567_11175 PF03061 Thioesterase superfamily NP567_11210 PF00199 Catalase NP567_11215 PF01292 Prokaryotic cytochrome b561 NP567_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11220 PF03466 LysR substrate binding domain NP567_11235 PF01494 FAD binding domain NP567_11240 PF00842 Alanine racemase, C-terminal domain NP567_11240 PF01168 Alanine racemase, N-terminal domain NP567_11245 PF00392 Bacterial regulatory proteins, gntR family NP567_11245 PF07702 UTRA domain NP567_11260 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11265 PF01266 FAD dependent oxidoreductase NP567_11270 PF00266 Aminotransferase class-V NP567_11275 PF13419 Haloacid dehalogenase-like hydrolase NP567_11280 PF01810 LysE type translocator NP567_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11295 PF03466 LysR substrate binding domain NP567_11300 PF00682 HMGL-like NP567_11305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP567_11305 PF18140 Propionyl-coenzyme A carboxylase BT domain NP567_11305 PF00364 Biotin-requiring enzyme NP567_11305 PF00289 Biotin carboxylase, N-terminal domain NP567_11305 PF02785 Biotin carboxylase C-terminal domain NP567_11310 PF00378 Enoyl-CoA hydratase/isomerase NP567_11320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_11320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_11320 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_11325 PF00440 Bacterial regulatory proteins, tetR family NP567_11385 PF18146 Damage-inducible protein CinA KH domain NP567_11385 PF02464 Competence-damaged protein NP567_11385 PF00994 Probable molybdopterin binding domain NP567_11395 PF00199 Catalase NP567_11395 PF18011 C-terminal domain found in long catalases NP567_11395 PF06628 Catalase-related immune-responsive NP567_11430 PF01037 Lrp/AsnC ligand binding domain NP567_11430 PF13404 AsnC-type helix-turn-helix domain NP567_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_11440 PF00512 His Kinase A (phospho-acceptor) domain NP567_11440 PF09308 LuxQ, periplasmic NP567_11440 PF00072 Response regulator receiver domain NP567_11445 PF00072 Response regulator receiver domain NP567_11460 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11465 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11490 PF03466 LysR substrate binding domain NP567_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11495 PF01810 LysE type translocator NP567_11520 PF00581 Rhodanese-like domain NP567_11535 PF03466 LysR substrate binding domain NP567_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11540 PF02798 Glutathione S-transferase, N-terminal domain NP567_11545 PF14834 Glutathione S-transferase, C-terminal domain NP567_11545 PF02798 Glutathione S-transferase, N-terminal domain NP567_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11550 PF03466 LysR substrate binding domain NP567_11555 PF03788 LrgA family NP567_11560 PF04172 LrgB-like family NP567_11565 PF00392 Bacterial regulatory proteins, gntR family NP567_11580 PF07690 Major Facilitator Superfamily NP567_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11590 PF03466 LysR substrate binding domain NP567_11595 PF16957 Malonate decarboxylase, alpha subunit, transporter NP567_11600 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NP567_11605 PF06857 Malonate decarboxylase delta subunit (MdcD) NP567_11610 PF01039 Carboxyl transferase domain NP567_11620 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NP567_11625 PF00698 Acyl transferase domain NP567_11645 PF00392 Bacterial regulatory proteins, gntR family NP567_11645 PF00155 Aminotransferase class I and II NP567_11655 PF02322 Cytochrome bd terminal oxidase subunit II NP567_11660 PF01654 Cytochrome bd terminal oxidase subunit I NP567_11675 PF00296 Luciferase-like monooxygenase NP567_11680 PF00083 Sugar (and other) transporter NP567_11690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP567_11695 PF00005 ABC transporter NP567_11700 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11710 PF01177 Asp/Glu/Hydantoin racemase NP567_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_11725 PF03466 LysR substrate binding domain NP567_11745 PF03960 ArsC family NP567_11750 PF01022 Bacterial regulatory protein, arsR family NP567_11755 PF01758 Sodium Bile acid symporter family NP567_11775 PF13192 Thioredoxin domain NP567_11775 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_11790 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_11795 PF00588 SpoU rRNA Methylase family NP567_11805 PF17763 Glutaminase/Asparaginase C-terminal domain NP567_11805 PF00710 Asparaginase, N-terminal NP567_11815 PF00155 Aminotransferase class I and II NP567_11820 PF01641 SelR domain NP567_11830 PF12833 Helix-turn-helix domain NP567_11830 PF12852 Cupin NP567_11840 PF00155 Aminotransferase class I and II NP567_11845 PF01966 HD domain NP567_11845 PF08335 GlnD PII-uridylyltransferase NP567_11845 PF01909 Nucleotidyltransferase domain NP567_11850 PF02222 ATP-grasp domain NP567_11860 PF05437 Branched-chain amino acid transport protein (AzlD) NP567_11865 PF03591 AzlC protein NP567_11895 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11900 PF00005 ABC transporter NP567_11900 PF09383 NIL domain NP567_11910 PF03180 NLPA lipoprotein NP567_11915 PF00296 Luciferase-like monooxygenase NP567_11925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NP567_11925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_11940 PF00528 Binding-protein-dependent transport system inner membrane component NP567_11950 PF00005 ABC transporter NP567_11960 PF01037 Lrp/AsnC ligand binding domain NP567_11965 PF01709 Transcriptional regulator NP567_11975 PF00440 Bacterial regulatory proteins, tetR family NP567_11995 PF03466 LysR substrate binding domain NP567_11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_12005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NP567_12015 PF00892 EamA-like transporter family NP567_12065 PF08331 Domain of unknown function (DUF1730) NP567_12075 PF02075 Crossover junction endodeoxyribonuclease RuvC NP567_12110 PF02773 S-adenosylmethionine synthetase, C-terminal domain NP567_12110 PF02772 S-adenosylmethionine synthetase, central domain NP567_12110 PF00438 S-adenosylmethionine synthetase, N-terminal domain NP567_12115 PF02780 Transketolase, C-terminal domain NP567_12115 PF02779 Transketolase, pyrimidine binding domain NP567_12115 PF00456 Transketolase, thiamine diphosphate binding domain NP567_12125 PF04264 YceI-like domain NP567_12145 PF05958 tRNA (Uracil-5-)-methyltransferase NP567_12155 PF00171 Aldehyde dehydrogenase family NP567_12155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NP567_12155 PF01619 Proline dehydrogenase NP567_12155 PF14850 DNA-binding domain of Proline dehydrogenase NP567_12160 PF01037 Lrp/AsnC ligand binding domain NP567_12165 PF00474 Sodium:solute symporter family NP567_12170 PF02146 Sir2 family NP567_12175 PF01597 Glycine cleavage H-protein NP567_12180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NP567_12180 PF12833 Helix-turn-helix domain NP567_12190 PF00664 ABC transporter transmembrane region NP567_12190 PF00005 ABC transporter NP567_12195 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NP567_12200 PF06912 Protein of unknown function (DUF1275) NP567_12205 PF00375 Sodium:dicarboxylate symporter family NP567_12220 PF08007 Cupin superfamily protein NP567_12235 PF00162 Phosphoglycerate kinase NP567_12245 PF01116 Fructose-bisphosphate aldolase class-II NP567_12255 PF04453 LPS transport system D NP567_12255 PF03968 OstA-like protein NP567_12260 PF01636 Phosphotransferase enzyme family NP567_12265 PF00483 Nucleotidyl transferase NP567_12275 PF13614 AAA domain NP567_12280 PF02195 ParB-like nuclease domain NP567_12280 PF17762 HTH domain found in ParB protein NP567_12285 PF01618 MotA/TolQ/ExbB proton channel family NP567_12320 PF01026 TatD related DNase NP567_12355 PF03167 Uracil DNA glycosylase superfamily NP567_12375 PF02224 Cytidylate kinase NP567_12380 PF00575 S1 RNA binding domain NP567_12385 PF00216 Bacterial DNA-binding protein NP567_12405 PF00743 Flavin-binding monooxygenase-like NP567_12415 PF03969 AFG1-like ATPase NP567_12420 PF01274 Malate synthase NP567_12430 PF02472 Biopolymer transport protein ExbD/TolR NP567_12440 PF01618 MotA/TolQ/ExbB proton channel family NP567_12475 PF00528 Binding-protein-dependent transport system inner membrane component NP567_12480 PF00528 Binding-protein-dependent transport system inner membrane component NP567_12500 PF00459 Inositol monophosphatase family NP567_12510 PF01649 Ribosomal protein S20 NP567_12515 PF13460 NAD(P)H-binding NP567_12520 PF03737 Aldolase/RraA NP567_12550 PF00211 Adenylate and Guanylate cyclase catalytic domain NP567_12555 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_12560 PF00012 Hsp70 protein NP567_12565 PF00226 DnaJ domain NP567_12565 PF07743 HSCB C-terminal oligomerisation domain NP567_12570 PF01521 Iron-sulphur cluster biosynthesis NP567_12575 PF01592 NifU-like N terminal domain NP567_12580 PF00266 Aminotransferase class-V NP567_12585 PF02082 Transcriptional regulator NP567_12610 PF12833 Helix-turn-helix domain NP567_12610 PF12852 Cupin NP567_12615 PF00487 Fatty acid desaturase NP567_12620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_12620 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_12620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_12625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_12625 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_12625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_12630 PF03109 ABC1 family NP567_12645 PF06276 Ferric iron reductase FhuF-like transporter NP567_12645 PF04183 IucA / IucC family NP567_12650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NP567_12655 PF07690 Major Facilitator Superfamily NP567_12675 PF03737 Aldolase/RraA NP567_12680 PF07715 TonB-dependent Receptor Plug Domain NP567_12680 PF00593 TonB dependent receptor NP567_12705 PF13419 Haloacid dehalogenase-like hydrolase NP567_12715 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NP567_12735 PF02654 Cobalamin-5-phosphate synthase NP567_12740 PF00793 DAHP synthetase I family NP567_12745 PF01925 Sulfite exporter TauE/SafE NP567_12765 PF00593 TonB dependent receptor NP567_12765 PF07715 TonB-dependent Receptor Plug Domain NP567_12780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_12820 PF01230 HIT domain NP567_12850 PF08241 Methyltransferase domain NP567_12855 PF00561 alpha/beta hydrolase fold NP567_12860 PF01053 Cys/Met metabolism PLP-dependent enzyme NP567_12870 PF02575 YbaB/EbfC DNA-binding family NP567_12875 PF02132 RecR protein NP567_12875 PF13662 Toprim domain NP567_12900 PF05166 YcgL domain NP567_12910 PF17862 AAA+ lid domain NP567_12910 PF00004 ATPase family associated with various cellular activities (AAA) NP567_12910 PF01434 Peptidase family M41 NP567_12920 PF00291 Pyridoxal-phosphate dependent enzyme NP567_12925 PF05175 Methyltransferase small domain NP567_12930 PF01264 Chorismate synthase NP567_12935 PF08448 PAS fold NP567_12935 PF00990 Diguanylate cyclase, GGDEF domain NP567_12950 PF04055 Radical SAM superfamily NP567_12955 PF00676 Dehydrogenase E1 component NP567_12960 PF02780 Transketolase, C-terminal domain NP567_12960 PF02779 Transketolase, pyrimidine binding domain NP567_12965 PF02817 e3 binding domain NP567_12965 PF00364 Biotin-requiring enzyme NP567_12965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP567_12970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_12970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP567_12975 PF00106 short chain dehydrogenase NP567_12980 PF08240 Alcohol dehydrogenase GroES-like domain NP567_12980 PF00107 Zinc-binding dehydrogenase NP567_12990 PF00158 Sigma-54 interaction domain NP567_12990 PF00072 Response regulator receiver domain NP567_12990 PF02954 Bacterial regulatory protein, Fis family NP567_12995 PF04273 Putative phosphatase (DUF442) NP567_12995 PF00753 Metallo-beta-lactamase superfamily NP567_13010 PF01925 Sulfite exporter TauE/SafE NP567_13025 PF06445 GyrI-like small molecule binding domain NP567_13025 PF12833 Helix-turn-helix domain NP567_13030 PF01638 HxlR-like helix-turn-helix NP567_13035 PF02525 Flavodoxin-like fold NP567_13045 PF00392 Bacterial regulatory proteins, gntR family NP567_13045 PF07702 UTRA domain NP567_13060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP567_13065 PF00528 Binding-protein-dependent transport system inner membrane component NP567_13070 PF00005 ABC transporter NP567_13095 PF10415 Fumarase C C-terminus NP567_13095 PF00206 Lyase NP567_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13110 PF03466 LysR substrate binding domain NP567_13115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13115 PF03466 LysR substrate binding domain NP567_13120 PF02803 Thiolase, C-terminal domain NP567_13120 PF00108 Thiolase, N-terminal domain NP567_13125 PF02667 Short chain fatty acid transporter NP567_13130 PF01144 Coenzyme A transferase NP567_13135 PF01144 Coenzyme A transferase NP567_13140 PF03466 LysR substrate binding domain NP567_13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13180 PF06719 AraC-type transcriptional regulator N-terminus NP567_13180 PF12833 Helix-turn-helix domain NP567_13185 PF07690 Major Facilitator Superfamily NP567_13190 PF01738 Dienelactone hydrolase family NP567_13205 PF01613 Flavin reductase like domain NP567_13215 PF12833 Helix-turn-helix domain NP567_13215 PF14525 AraC-binding-like domain NP567_13220 PF00970 Oxidoreductase FAD-binding domain NP567_13220 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_13220 PF00175 Oxidoreductase NAD-binding domain NP567_13225 PF00866 Ring hydroxylating beta subunit NP567_13230 PF00355 Rieske [2Fe-2S] domain NP567_13230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP567_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13235 PF03459 TOBE domain NP567_13250 PF03459 TOBE domain NP567_13250 PF00005 ABC transporter NP567_13255 PF00106 short chain dehydrogenase NP567_13260 PF00857 Isochorismatase family NP567_13260 PF00550 Phosphopantetheine attachment site NP567_13270 PF00149 Calcineurin-like phosphoesterase NP567_13280 PF08042 PqqA family NP567_13290 PF03070 TENA/THI-4/PQQC family NP567_13295 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NP567_13300 PF04055 Radical SAM superfamily NP567_13300 PF13186 Iron-sulfur cluster-binding domain NP567_13305 PF01244 Membrane dipeptidase (Peptidase family M19) NP567_13335 PF00199 Catalase NP567_13345 PF08240 Alcohol dehydrogenase GroES-like domain NP567_13345 PF00107 Zinc-binding dehydrogenase NP567_13360 PF13953 PapC C-terminal domain NP567_13360 PF13954 PapC N-terminal domain NP567_13360 PF00577 Outer membrane usher protein NP567_13365 PF02753 Pili assembly chaperone PapD, C-terminal domain NP567_13365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NP567_13370 PF16970 Type-1 fimbrial protein, A NP567_13400 PF13673 Acetyltransferase (GNAT) domain NP567_13410 PF06114 IrrE N-terminal-like domain NP567_13435 PF13291 ACT domain NP567_13435 PF04607 Region found in RelA / SpoT proteins NP567_13435 PF02824 TGS domain NP567_13445 PF01975 Survival protein SurE NP567_13470 PF07690 Major Facilitator Superfamily NP567_13480 PF01425 Amidase NP567_13485 PF03472 Autoinducer binding domain NP567_13485 PF00196 Bacterial regulatory proteins, luxR family NP567_13520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NP567_13525 PF14572 Phosphoribosyl synthetase-associated domain NP567_13525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP567_13545 PF00005 ABC transporter NP567_13550 PF01032 FecCD transport family NP567_13560 PF08240 Alcohol dehydrogenase GroES-like domain NP567_13560 PF00107 Zinc-binding dehydrogenase NP567_13565 PF12833 Helix-turn-helix domain NP567_13565 PF06719 AraC-type transcriptional regulator N-terminus NP567_13570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP567_13570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP567_13575 PF07690 Major Facilitator Superfamily NP567_13585 PF03466 LysR substrate binding domain NP567_13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13615 PF00529 HlyD membrane-fusion protein of T1SS NP567_13615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_13640 PF08450 SMP-30/Gluconolactonase/LRE-like region NP567_13645 PF00392 Bacterial regulatory proteins, gntR family NP567_13645 PF07702 UTRA domain NP567_13655 PF04909 Amidohydrolase NP567_13665 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) NP567_13720 PF13193 AMP-binding enzyme C-terminal domain NP567_13720 PF00501 AMP-binding enzyme NP567_13730 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_13730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_13730 PF12806 Acetyl-CoA dehydrogenase C-terminal like NP567_13730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_13740 PF00106 short chain dehydrogenase NP567_13760 PF08359 YsiA-like protein, C-terminal region NP567_13760 PF00440 Bacterial regulatory proteins, tetR family NP567_13765 PF12706 Beta-lactamase superfamily domain NP567_13785 PF13411 MerR HTH family regulatory protein NP567_13795 PF01872 RibD C-terminal domain NP567_13800 PF00106 short chain dehydrogenase NP567_13805 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_13805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_13810 PF00561 alpha/beta hydrolase fold NP567_13830 PF07690 Major Facilitator Superfamily NP567_13835 PF00920 Dehydratase family NP567_13840 PF07729 FCD domain NP567_13840 PF00392 Bacterial regulatory proteins, gntR family NP567_13855 PF13378 Enolase C-terminal domain-like NP567_13855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NP567_13860 PF02426 Muconolactone delta-isomerase NP567_13865 PF00775 Dioxygenase NP567_13865 PF04444 Catechol dioxygenase N terminus NP567_13870 PF01144 Coenzyme A transferase NP567_13875 PF01144 Coenzyme A transferase NP567_13885 PF12146 Serine aminopeptidase, S33 NP567_13890 PF01804 Penicillin amidase NP567_13905 PF07833 Copper amine oxidase N-terminal domain NP567_13905 PF02728 Copper amine oxidase, N3 domain NP567_13905 PF01179 Copper amine oxidase, enzyme domain NP567_13905 PF02727 Copper amine oxidase, N2 domain NP567_13910 PF02311 AraC-like ligand binding domain NP567_13910 PF12833 Helix-turn-helix domain NP567_13915 PF01613 Flavin reductase like domain NP567_13920 PF00175 Oxidoreductase NAD-binding domain NP567_13920 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_13935 PF00355 Rieske [2Fe-2S] domain NP567_13935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NP567_13950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NP567_13955 PF01425 Amidase NP567_13965 PF07690 Major Facilitator Superfamily NP567_13975 PF00106 short chain dehydrogenase NP567_13990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_13990 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_13990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_13995 PF03466 LysR substrate binding domain NP567_14000 PF09339 IclR helix-turn-helix domain NP567_14000 PF01614 Bacterial transcriptional regulator NP567_14005 PF00753 Metallo-beta-lactamase superfamily NP567_14015 PF04143 Sulphur transport NP567_14030 PF04966 Carbohydrate-selective porin, OprB family NP567_14035 PF05048 Periplasmic copper-binding protein (NosD) NP567_14045 PF00775 Dioxygenase NP567_14050 PF00775 Dioxygenase NP567_14050 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NP567_14055 PF02627 Carboxymuconolactone decarboxylase family NP567_14060 PF07690 Major Facilitator Superfamily NP567_14065 PF00561 alpha/beta hydrolase fold NP567_14070 PF10397 Adenylosuccinate lyase C-terminus NP567_14070 PF00206 Lyase NP567_14080 PF01144 Coenzyme A transferase NP567_14085 PF01144 Coenzyme A transferase NP567_14090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP567_14095 PF04977 Septum formation initiator NP567_14105 PF00113 Enolase, C-terminal TIM barrel domain NP567_14105 PF03952 Enolase, N-terminal domain NP567_14110 PF00793 DAHP synthetase I family NP567_14115 PF06418 CTP synthase N-terminus NP567_14115 PF00117 Glutamine amidotransferase class-I NP567_14145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_14145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_14160 PF00793 DAHP synthetase I family NP567_14170 PF02861 Clp amino terminal domain, pathogenicity island component NP567_14170 PF07724 AAA domain (Cdc48 subfamily) NP567_14170 PF00004 ATPase family associated with various cellular activities (AAA) NP567_14170 PF10431 C-terminal, D2-small domain, of ClpB protein NP567_14170 PF17871 AAA lid domain NP567_14175 PF02617 ATP-dependent Clp protease adaptor protein ClpS NP567_14185 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP567_14185 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP567_14205 PF00585 C-terminal regulatory domain of Threonine dehydratase NP567_14205 PF00291 Pyridoxal-phosphate dependent enzyme NP567_14210 PF02254 TrkA-N domain NP567_14210 PF02080 TrkA-C domain NP567_14220 PF02253 Phospholipase A1 NP567_14230 PF07715 TonB-dependent Receptor Plug Domain NP567_14230 PF00593 TonB dependent receptor NP567_14235 PF00294 pfkB family carbohydrate kinase NP567_14260 PF02322 Cytochrome bd terminal oxidase subunit II NP567_14265 PF08173 Membrane bound YbgT-like protein NP567_14280 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NP567_14290 PF00448 SRP54-type protein, GTPase domain NP567_14290 PF02881 SRP54-type protein, helical bundle domain NP567_14315 PF00478 IMP dehydrogenase / GMP reductase domain NP567_14315 PF00571 CBS domain NP567_14320 PF00202 Aminotransferase class-III NP567_14325 PF00462 Glutaredoxin NP567_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_14335 PF03466 LysR substrate binding domain NP567_14340 PF00557 Metallopeptidase family M24 NP567_14345 PF05525 Branched-chain amino acid transport protein NP567_14370 PF05524 PEP-utilising enzyme, N-terminal NP567_14370 PF00391 PEP-utilising enzyme, mobile domain NP567_14370 PF02896 PEP-utilising enzyme, TIM barrel domain NP567_14370 PF00381 PTS HPr component phosphorylation site NP567_14370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP567_14380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP567_14380 PF02378 Phosphotransferase system, EIIC NP567_14405 PF07995 Glucose / Sorbosone dehydrogenase NP567_14415 PF00872 Transposase, Mutator family NP567_14425 PF01740 STAS domain NP567_14425 PF00916 Sulfate permease family NP567_14445 PF00324 Amino acid permease NP567_14450 PF00266 Aminotransferase class-V NP567_14480 PF13419 Haloacid dehalogenase-like hydrolase NP567_14490 PF00154 recA bacterial DNA recombination protein NP567_14495 PF02631 RecX family NP567_14510 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_14510 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NP567_14515 PF07977 FabA-like domain NP567_14520 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_14520 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NP567_14540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP567_14540 PF13288 DXP reductoisomerase C-terminal domain NP567_14540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NP567_14550 PF01255 Putative undecaprenyl diphosphate synthase NP567_14555 PF01765 Ribosome recycling factor NP567_14560 PF00696 Amino acid kinase family NP567_14565 PF18693 TRAM domain NP567_14565 PF00919 Uncharacterized protein family UPF0004 NP567_14565 PF04055 Radical SAM superfamily NP567_14580 PF02954 Bacterial regulatory protein, Fis family NP567_14580 PF00072 Response regulator receiver domain NP567_14580 PF00158 Sigma-54 interaction domain NP567_14585 PF00440 Bacterial regulatory proteins, tetR family NP567_14590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP567_14590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP567_14600 PF02542 YgbB family NP567_14610 PF01266 FAD dependent oxidoreductase NP567_14640 PF02635 DsrE/DsrF-like family NP567_14665 PF00392 Bacterial regulatory proteins, gntR family NP567_14665 PF00155 Aminotransferase class I and II NP567_14670 PF01638 HxlR-like helix-turn-helix NP567_14675 PF00994 Probable molybdopterin binding domain NP567_14675 PF03453 MoeA N-terminal region (domain I and II) NP567_14675 PF03454 MoeA C-terminal region (domain IV) NP567_14680 PF01967 MoaC family NP567_14680 PF00994 Probable molybdopterin binding domain NP567_14685 PF02391 MoaE protein NP567_14695 PF04055 Radical SAM superfamily NP567_14695 PF06463 Molybdenum Cofactor Synthesis C NP567_14705 PF12804 MobA-like NTP transferase domain NP567_14715 PF04324 BFD-like [2Fe-2S] binding domain NP567_14715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP567_14715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP567_14715 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_14715 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP567_14730 PF00486 Transcriptional regulatory protein, C terminal NP567_14730 PF00072 Response regulator receiver domain NP567_14735 PF00005 ABC transporter NP567_14745 PF13438 Domain of unknown function (DUF4113) NP567_14745 PF00817 impB/mucB/samB family NP567_14745 PF11799 impB/mucB/samB family C-terminal domain NP567_14750 PF01220 Dehydroquinase class II NP567_14755 PF00364 Biotin-requiring enzyme NP567_14770 PF12832 MFS_1 like family NP567_14790 PF01645 Conserved region in glutamate synthase NP567_14805 PF01565 FAD binding domain NP567_14805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NP567_14820 PF00465 Iron-containing alcohol dehydrogenase NP567_14825 PF03061 Thioesterase superfamily NP567_14830 PF04185 Phosphoesterase family NP567_14830 PF05506 Domain of unknown function (DUF756) NP567_14835 PF12170 DNA polymerase III tau subunit V interacting with alpha NP567_14835 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NP567_14835 PF12169 DNA polymerase III subunits gamma and tau domain III NP567_14840 PF07690 Major Facilitator Superfamily NP567_14850 PF00144 Beta-lactamase NP567_14855 PF01575 MaoC like domain NP567_14865 PF02803 Thiolase, C-terminal domain NP567_14865 PF00108 Thiolase, N-terminal domain NP567_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_14875 PF03466 LysR substrate binding domain NP567_14880 PF00923 Transaldolase/Fructose-6-phosphate aldolase NP567_14885 PF01810 LysE type translocator NP567_14890 PF01037 Lrp/AsnC ligand binding domain NP567_14895 PF03594 Benzoate membrane transport protein NP567_14905 PF00689 Cation transporting ATPase, C-terminus NP567_14905 PF00690 Cation transporter/ATPase, N-terminus NP567_14925 PF00582 Universal stress protein family NP567_14930 PF00005 ABC transporter NP567_14930 PF12848 ABC transporter NP567_14950 PF00593 TonB dependent receptor NP567_14950 PF07715 TonB-dependent Receptor Plug Domain NP567_14980 PF00924 Mechanosensitive ion channel NP567_15005 PF13005 zinc-finger binding domain of transposase IS66 NP567_15005 PF13007 Transposase C of IS166 homeodomain NP567_15005 PF13817 IS66 C-terminal element NP567_15005 PF03050 Transposase IS66 family NP567_15020 PF01037 Lrp/AsnC ligand binding domain NP567_15025 PF01817 Chorismate mutase type II NP567_15070 PF11940 Domain of unknown function (DUF3458) Ig-like fold NP567_15070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NP567_15070 PF01433 Peptidase family M1 domain NP567_15085 PF02110 Hydroxyethylthiazole kinase family NP567_15100 PF00465 Iron-containing alcohol dehydrogenase NP567_15115 PF00171 Aldehyde dehydrogenase family NP567_15120 PF13520 Amino acid permease NP567_15125 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NP567_15130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NP567_15135 PF00958 GMP synthase C terminal domain NP567_15135 PF00117 Glutamine amidotransferase class-I NP567_15135 PF02540 NAD synthase NP567_15140 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP567_15140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NP567_15145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP567_15150 PF00149 Calcineurin-like phosphoesterase NP567_15170 PF17209 Hfq protein NP567_15180 PF01119 DNA mismatch repair protein, C-terminal domain NP567_15180 PF08676 MutL C terminal dimerisation domain NP567_15185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NP567_15190 PF00849 RNA pseudouridylate synthase NP567_15190 PF01479 S4 domain NP567_15215 PF04284 Protein of unknown function (DUF441) NP567_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_15220 PF03466 LysR substrate binding domain NP567_15235 PF07690 Major Facilitator Superfamily NP567_15240 PF00027 Cyclic nucleotide-binding domain NP567_15240 PF00520 Ion transport protein NP567_15250 PF00330 Aconitase family (aconitate hydratase) NP567_15250 PF06434 Aconitate hydratase 2 N-terminus NP567_15250 PF11791 Aconitate B N-terminal domain NP567_15275 PF03232 Ubiquinone biosynthesis protein COQ7 NP567_15285 PF00120 Glutamine synthetase, catalytic domain NP567_15300 PF02669 K+-transporting ATPase, c chain NP567_15310 PF03814 Potassium-transporting ATPase A subunit NP567_15320 PF02152 Dihydroneopterin aldolase NP567_15325 PF03109 ABC1 family NP567_15330 PF00899 ThiF family NP567_15335 PF01613 Flavin reductase like domain NP567_15340 PF13193 AMP-binding enzyme C-terminal domain NP567_15340 PF00501 AMP-binding enzyme NP567_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_15345 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_15350 PF00106 short chain dehydrogenase NP567_15355 PF12833 Helix-turn-helix domain NP567_15360 PF13847 Methyltransferase domain NP567_15360 PF17827 PrmC N-terminal domain NP567_15365 PF00472 RF-1 domain NP567_15365 PF03462 PCRF domain NP567_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_15375 PF03466 LysR substrate binding domain NP567_15390 PF00296 Luciferase-like monooxygenase NP567_15400 PF13994 PgaD-like protein NP567_15405 PF00535 Glycosyl transferase family 2 NP567_15425 PF00391 PEP-utilising enzyme, mobile domain NP567_15425 PF02896 PEP-utilising enzyme, TIM barrel domain NP567_15425 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NP567_15435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NP567_15435 PF06481 COX Aromatic Rich Motif NP567_15440 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP567_15445 PF00510 Cytochrome c oxidase subunit III NP567_15450 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NP567_15455 PF01040 UbiA prenyltransferase family NP567_15460 PF01250 Ribosomal protein S6 NP567_15465 PF01084 Ribosomal protein S18 NP567_15470 PF01281 Ribosomal protein L9, N-terminal domain NP567_15470 PF03948 Ribosomal protein L9, C-terminal domain NP567_15515 PF01134 Glucose inhibited division protein A NP567_15515 PF13932 GidA associated domain NP567_15535 PF02954 Bacterial regulatory protein, Fis family NP567_15540 PF01808 AICARFT/IMPCHase bienzyme NP567_15540 PF02142 MGS-like domain NP567_15545 PF02843 Phosphoribosylglycinamide synthetase, C domain NP567_15545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NP567_15545 PF02844 Phosphoribosylglycinamide synthetase, N domain NP567_15550 PF03180 NLPA lipoprotein NP567_15555 PF00005 ABC transporter NP567_15555 PF09383 NIL domain NP567_15560 PF00528 Binding-protein-dependent transport system inner membrane component NP567_15565 PF00753 Metallo-beta-lactamase superfamily NP567_15565 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP567_15575 PF00375 Sodium:dicarboxylate symporter family NP567_15595 PF07995 Glucose / Sorbosone dehydrogenase NP567_15600 PF00892 EamA-like transporter family NP567_15605 PF01177 Asp/Glu/Hydantoin racemase NP567_15620 PF02470 MlaD protein NP567_15625 PF04403 Paraquat-inducible protein A NP567_15655 PF00293 NUDIX domain NP567_15660 PF08946 Osmosensory transporter coiled coil NP567_15660 PF00083 Sugar (and other) transporter NP567_15665 PF00083 Sugar (and other) transporter NP567_15665 PF08946 Osmosensory transporter coiled coil NP567_15715 PF07729 FCD domain NP567_15715 PF00392 Bacterial regulatory proteins, gntR family NP567_15725 PF03616 Sodium/glutamate symporter NP567_15730 PF00561 alpha/beta hydrolase fold NP567_15755 PF04076 Bacterial OB fold (BOF) protein NP567_15790 PF00171 Aldehyde dehydrogenase family NP567_15795 PF00202 Aminotransferase class-III NP567_15800 PF03466 LysR substrate binding domain NP567_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_15825 PF03793 PASTA domain NP567_15825 PF00069 Protein kinase domain NP567_15845 PF00814 Glycoprotease family NP567_15850 PF01165 Ribosomal protein S21 NP567_15855 PF09424 Yqey-like protein NP567_15860 PF01435 Peptidase family M48 NP567_15885 PF02674 Colicin V production protein NP567_15890 PF01180 Dihydroorotate dehydrogenase NP567_15915 PF00881 Nitroreductase family NP567_15925 PF00271 Helicase conserved C-terminal domain NP567_15925 PF00270 DEAD/DEAH box helicase NP567_15930 PF00313 'Cold-shock' DNA-binding domain NP567_15945 PF04542 Sigma-70 region 2 NP567_15945 PF04545 Sigma-70, region 4 NP567_15945 PF00140 Sigma-70 factor, region 1.2 NP567_15960 PF05690 Thiazole biosynthesis protein ThiG NP567_15970 PF03883 Peroxide stress protein YaaA NP567_15985 PF00753 Metallo-beta-lactamase superfamily NP567_15990 PF01139 tRNA-splicing ligase RtcB NP567_16005 PF01137 RNA 3'-terminal phosphate cyclase NP567_16005 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain NP567_16010 PF07687 Peptidase dimerisation domain NP567_16010 PF01546 Peptidase family M20/M25/M40 NP567_16020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP567_16025 PF01842 ACT domain NP567_16025 PF00800 Prephenate dehydratase NP567_16025 PF01817 Chorismate mutase type II NP567_16030 PF00756 Putative esterase NP567_16035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_16035 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_16035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_16040 PF00375 Sodium:dicarboxylate symporter family NP567_16045 PF02885 Glycosyl transferase family, helical bundle domain NP567_16045 PF00591 Glycosyl transferase family, a/b domain NP567_16050 PF07023 Protein of unknown function (DUF1315) NP567_16055 PF01513 ATP-NAD kinase NP567_16060 PF00905 Penicillin binding protein transpeptidase domain NP567_16060 PF14814 Bifunctional transglycosylase second domain NP567_16060 PF00912 Transglycosylase NP567_16070 PF00293 NUDIX domain NP567_16080 PF08521 Two-component sensor kinase N-terminal NP567_16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_16080 PF00512 His Kinase A (phospho-acceptor) domain NP567_16095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NP567_16095 PF00437 Type II/IV secretion system protein NP567_16105 PF18389 TrmO C-terminal domain NP567_16105 PF01980 tRNA-methyltransferase O NP567_16110 PF00175 Oxidoreductase NAD-binding domain NP567_16110 PF00970 Oxidoreductase FAD-binding domain NP567_16115 PF02567 Phenazine biosynthesis-like protein NP567_16125 PF01136 Peptidase family U32 NP567_16125 PF16325 Peptidase family U32 C-terminal domain NP567_16130 PF00037 4Fe-4S binding domain NP567_16135 PF00893 Small Multidrug Resistance protein NP567_16140 PF00005 ABC transporter NP567_16145 PF00528 Binding-protein-dependent transport system inner membrane component NP567_16150 PF00528 Binding-protein-dependent transport system inner membrane component NP567_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_16160 PF03466 LysR substrate binding domain NP567_16165 PF13533 Biotin-lipoyl like NP567_16170 PF00873 AcrB/AcrD/AcrF family NP567_16210 PF00005 ABC transporter NP567_16215 PF01061 ABC-2 type transporter NP567_16220 PF14489 QueF-like protein NP567_16220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NP567_16230 PF01098 Cell cycle protein NP567_16235 PF13406 Transglycosylase SLT domain NP567_16240 PF03330 Lytic transglycolase NP567_16240 PF05036 Sporulation related domain NP567_16270 PF00889 Elongation factor TS NP567_16275 PF00318 Ribosomal protein S2 NP567_16280 PF00557 Metallopeptidase family M24 NP567_16290 PF07690 Major Facilitator Superfamily NP567_16300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP567_16300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_16305 PF04055 Radical SAM superfamily NP567_16310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_16310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_16310 PF09317 Domain of unknown function (DUF1974) NP567_16330 PF02219 Methylenetetrahydrofolate reductase NP567_16345 PF00390 Malic enzyme, N-terminal domain NP567_16345 PF01515 Phosphate acetyl/butaryl transferase NP567_16345 PF03949 Malic enzyme, NAD binding domain NP567_16350 PF01743 Poly A polymerase head domain NP567_16350 PF12627 Probable RNA and SrmB- binding site of polymerase A NP567_16355 PF13180 PDZ domain NP567_16360 PF01784 NIF3 (NGG1p interacting factor 3) NP567_16365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NP567_16365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NP567_16400 PF01040 UbiA prenyltransferase family NP567_16405 PF01040 UbiA prenyltransferase family NP567_16415 PF00120 Glutamine synthetase, catalytic domain NP567_16415 PF03951 Glutamine synthetase, beta-Grasp domain NP567_16425 PF00872 Transposase, Mutator family NP567_16440 PF00117 Glutamine amidotransferase class-I NP567_16450 PF00593 TonB dependent receptor NP567_16450 PF07715 TonB-dependent Receptor Plug Domain NP567_16455 PF02885 Glycosyl transferase family, helical bundle domain NP567_16455 PF00591 Glycosyl transferase family, a/b domain NP567_16460 PF00218 Indole-3-glycerol phosphate synthase NP567_16480 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_16480 PF01799 [2Fe-2S] binding domain NP567_16485 PF01227 GTP cyclohydrolase I NP567_16490 PF00144 Beta-lactamase NP567_16505 PF05675 Protein of unknown function (DUF817) NP567_16510 PF01208 Uroporphyrinogen decarboxylase (URO-D) NP567_16520 PF00425 chorismate binding enzyme NP567_16530 PF00975 Thioesterase domain NP567_16535 PF00005 ABC transporter NP567_16545 PF00282 Pyridoxal-dependent decarboxylase conserved domain NP567_16550 PF00550 Phosphopantetheine attachment site NP567_16550 PF00857 Isochorismatase family NP567_16555 PF00501 AMP-binding enzyme NP567_16555 PF13193 AMP-binding enzyme C-terminal domain NP567_16565 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NP567_16570 PF07715 TonB-dependent Receptor Plug Domain NP567_16570 PF00593 TonB dependent receptor NP567_16580 PF00005 ABC transporter NP567_16585 PF01032 FecCD transport family NP567_16600 PF00501 AMP-binding enzyme NP567_16600 PF13193 AMP-binding enzyme C-terminal domain NP567_16600 PF00550 Phosphopantetheine attachment site NP567_16600 PF00668 Condensation domain NP567_16610 PF13309 HTH domain NP567_16610 PF08348 YheO-like PAS domain NP567_16615 PF00291 Pyridoxal-phosphate dependent enzyme NP567_16620 PF02678 Pirin NP567_16620 PF17954 Quercetinase C-terminal cupin domain NP567_16640 PF04328 Selenoprotein, putative NP567_16645 PF02554 Carbon starvation protein CstA NP567_16645 PF13722 5TM C-terminal transporter carbon starvation CstA NP567_16650 PF09285 Elongation factor P, C-terminal NP567_16650 PF01132 Elongation factor P (EF-P) OB domain NP567_16650 PF08207 Elongation factor P (EF-P) KOW-like domain NP567_16655 PF04055 Radical SAM superfamily NP567_16665 PF12792 CSS motif domain associated with EAL NP567_16665 PF00563 EAL domain NP567_16670 PF01197 Ribosomal protein L31 NP567_16680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP567_16685 PF07690 Major Facilitator Superfamily NP567_16690 PF13654 AAA domain NP567_16690 PF05362 Lon protease (S16) C-terminal proteolytic domain NP567_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_16695 PF03466 LysR substrate binding domain NP567_16700 PF01551 Peptidase family M23 NP567_16700 PF01476 LysM domain NP567_16705 PF01975 Survival protein SurE NP567_16720 PF07943 Penicillin-binding protein 5, C-terminal domain NP567_16720 PF00768 D-alanyl-D-alanine carboxypeptidase NP567_16725 PF00132 Bacterial transferase hexapeptide (six repeats) NP567_16745 PF08328 Adenylosuccinate lyase C-terminal NP567_16745 PF00206 Lyase NP567_16765 PF00005 ABC transporter NP567_16770 PF00528 Binding-protein-dependent transport system inner membrane component NP567_16795 PF01037 Lrp/AsnC ligand binding domain NP567_16800 PF00171 Aldehyde dehydrogenase family NP567_16810 PF00202 Aminotransferase class-III NP567_16825 PF02525 Flavodoxin-like fold NP567_16830 PF00487 Fatty acid desaturase NP567_16835 PF00111 2Fe-2S iron-sulfur cluster binding domain NP567_16835 PF00175 Oxidoreductase NAD-binding domain NP567_16835 PF00970 Oxidoreductase FAD-binding domain NP567_16840 PF00440 Bacterial regulatory proteins, tetR family NP567_16855 PF00849 RNA pseudouridylate synthase NP567_16865 PF00202 Aminotransferase class-III NP567_16880 PF02581 Thiamine monophosphate synthase NP567_16905 PF00675 Insulinase (Peptidase family M16) NP567_16905 PF05193 Peptidase M16 inactive domain NP567_16910 PF02567 Phenazine biosynthesis-like protein NP567_16915 PF00375 Sodium:dicarboxylate symporter family NP567_16920 PF03466 LysR substrate binding domain NP567_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_16950 PF00849 RNA pseudouridylate synthase NP567_16955 PF03971 Monomeric isocitrate dehydrogenase NP567_16965 PF07943 Penicillin-binding protein 5, C-terminal domain NP567_16965 PF00768 D-alanyl-D-alanine carboxypeptidase NP567_16975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP567_16980 PF00875 DNA photolyase NP567_16980 PF03441 FAD binding domain of DNA photolyase NP567_17025 PF03060 Nitronate monooxygenase NP567_17035 PF07759 Protein of unknown function (DUF1615) NP567_17045 PF01472 PUA domain NP567_17045 PF00696 Amino acid kinase family NP567_17050 PF01926 50S ribosome-binding GTPase NP567_17050 PF01018 GTP1/OBG NP567_17065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP567_17065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP567_17080 PF04851 Type III restriction enzyme, res subunit NP567_17080 PF00271 Helicase conserved C-terminal domain NP567_17080 PF12344 Ultra-violet resistance protein B NP567_17080 PF02151 UvrB/uvrC motif NP567_17080 PF17757 UvrB interaction domain NP567_17115 PF00012 Hsp70 protein NP567_17120 PF00012 Hsp70 protein NP567_17150 PF00106 short chain dehydrogenase NP567_17155 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NP567_17160 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NP567_17165 PF02565 Recombination protein O C terminal NP567_17165 PF11967 Recombination protein O N terminal NP567_17175 PF07650 KH domain NP567_17175 PF01926 50S ribosome-binding GTPase NP567_17180 PF00035 Double-stranded RNA binding motif NP567_17180 PF14622 Ribonuclease-III-like NP567_17190 PF10502 Signal peptidase, peptidase S26 NP567_17195 PF00679 Elongation factor G C-terminus NP567_17195 PF03144 Elongation factor Tu domain 2 NP567_17195 PF00009 Elongation factor Tu GTP binding domain NP567_17195 PF06421 GTP-binding protein LepA C-terminus NP567_17200 PF13302 Acetyltransferase (GNAT) domain NP567_17215 PF00890 FAD binding domain NP567_17215 PF02910 Fumarate reductase flavoprotein C-term NP567_17225 PF02223 Thymidylate kinase NP567_17250 PF00528 Binding-protein-dependent transport system inner membrane component NP567_17260 PF00005 ABC transporter NP567_17260 PF12857 TOBE-like domain NP567_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_17265 PF03466 LysR substrate binding domain NP567_17285 PF06508 Queuosine biosynthesis protein QueC NP567_17300 PF00578 AhpC/TSA family NP567_17310 PF01467 Cytidylyltransferase-like NP567_17310 PF00293 NUDIX domain NP567_17315 PF00378 Enoyl-CoA hydratase/isomerase NP567_17320 PF01784 NIF3 (NGG1p interacting factor 3) NP567_17330 PF07690 Major Facilitator Superfamily NP567_17335 PF02769 AIR synthase related protein, C-terminal domain NP567_17335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NP567_17335 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NP567_17350 PF17864 RuvB AAA lid domain NP567_17350 PF05491 RuvB C-terminal winged helix domain NP567_17350 PF05496 Holliday junction DNA helicase RuvB P-loop domain NP567_17355 PF01546 Peptidase family M20/M25/M40 NP567_17355 PF07687 Peptidase dimerisation domain NP567_17360 PF03061 Thioesterase superfamily NP567_17365 PF01618 MotA/TolQ/ExbB proton channel family NP567_17370 PF02472 Biopolymer transport protein ExbD/TolR NP567_17380 PF07676 WD40-like Beta Propeller Repeat NP567_17380 PF04052 TolB amino-terminal domain NP567_17385 PF00691 OmpA family NP567_17395 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NP567_17400 PF00588 SpoU rRNA Methylase family NP567_17400 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP567_17430 PF00308 Bacterial dnaA protein NP567_17430 PF08299 Bacterial dnaA protein helix-turn-helix NP567_17430 PF11638 DnaA N-terminal domain NP567_17435 PF01594 AI-2E family transporter NP567_17440 PF02769 AIR synthase related protein, C-terminal domain NP567_17440 PF00586 AIR synthase related protein, N-terminal domain NP567_17450 PF12697 Alpha/beta hydrolase family NP567_17455 PF06965 Na+/H+ antiporter 1 NP567_17455 PF01343 Peptidase family S49 NP567_17465 PF03772 Competence protein NP567_17465 PF13567 Domain of unknown function (DUF4131) NP567_17465 PF00753 Metallo-beta-lactamase superfamily NP567_17470 PF00005 ABC transporter NP567_17475 PF02687 FtsX-like permease family NP567_17475 PF12704 MacB-like periplasmic core domain NP567_17485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NP567_17505 PF13533 Biotin-lipoyl like NP567_17525 PF00535 Glycosyl transferase family 2 NP567_17540 PF00521 DNA gyrase/topoisomerase IV, subunit A NP567_17540 PF03989 DNA gyrase C-terminal domain, beta-propeller NP567_17545 PF00766 Electron transfer flavoprotein FAD-binding domain NP567_17545 PF01012 Electron transfer flavoprotein domain NP567_17550 PF01012 Electron transfer flavoprotein domain NP567_17555 PF00589 Phage integrase family NP567_17555 PF02899 Phage integrase, N-terminal SAM-like domain NP567_17560 PF01810 LysE type translocator NP567_17565 PF01678 Diaminopimelate epimerase NP567_17580 PF00324 Amino acid permease NP567_17585 PF18073 Rubredoxin metal binding domain NP567_17595 PF00152 tRNA synthetases class II (D, K and N) NP567_17605 PF06803 Protein of unknown function (DUF1232) NP567_17610 PF02634 FdhD/NarQ family NP567_17620 PF02595 Glycerate kinase family NP567_17635 PF00881 Nitroreductase family NP567_17700 PF09857 Putative toxin of bacterial toxin-antitoxin pair NP567_17710 PF00550 Phosphopantetheine attachment site NP567_17710 PF00975 Thioesterase domain NP567_17710 PF00668 Condensation domain NP567_17710 PF13193 AMP-binding enzyme C-terminal domain NP567_17710 PF00501 AMP-binding enzyme NP567_17725 PF03449 Transcription elongation factor, N-terminal NP567_17725 PF01272 Transcription elongation factor, GreA/GreB, C-term NP567_17730 PF01464 Transglycosylase SLT domain NP567_17730 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP567_17740 PF01171 PP-loop family NP567_17745 PF01464 Transglycosylase SLT domain NP567_17750 PF01435 Peptidase family M48 NP567_17765 PF03009 Glycerophosphoryl diester phosphodiesterase family NP567_17770 PF00753 Metallo-beta-lactamase superfamily NP567_17775 PF01219 Prokaryotic diacylglycerol kinase NP567_17780 PF00118 TCP-1/cpn60 chaperonin family NP567_17785 PF00166 Chaperonin 10 Kd subunit NP567_17795 PF00781 Diacylglycerol kinase catalytic domain NP567_17800 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NP567_17800 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NP567_17805 PF01266 FAD dependent oxidoreductase NP567_17805 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NP567_17810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP567_17810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP567_17815 PF00083 Sugar (and other) transporter NP567_17830 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NP567_17830 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NP567_17845 PF09423 PhoD-like phosphatase NP567_17845 PF16655 PhoD-like phosphatase, N-terminal domain NP567_17870 PF17862 AAA+ lid domain NP567_17870 PF06480 FtsH Extracellular NP567_17870 PF01434 Peptidase family M41 NP567_17870 PF00004 ATPase family associated with various cellular activities (AAA) NP567_17875 PF01728 FtsJ-like methyltransferase NP567_17880 PF01985 CRS1 / YhbY (CRM) domain NP567_17895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NP567_17895 PF00117 Glutamine amidotransferase class-I NP567_17900 PF02142 MGS-like domain NP567_17900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NP567_17900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP567_17905 PF01272 Transcription elongation factor, GreA/GreB, C-term NP567_17905 PF03449 Transcription elongation factor, N-terminal NP567_17915 PF01042 Endoribonuclease L-PSP NP567_17925 PF00582 Universal stress protein family NP567_17930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP567_17955 PF00999 Sodium/hydrogen exchanger family NP567_17960 PF04228 Putative neutral zinc metallopeptidase NP567_17965 PF05661 Protein of unknown function (DUF808) NP567_17970 PF00579 tRNA synthetases class I (W and Y) NP567_17975 PF00549 CoA-ligase NP567_17975 PF02629 CoA binding domain NP567_17980 PF00549 CoA-ligase NP567_17980 PF08442 ATP-grasp domain NP567_17985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP567_17985 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_17990 PF02817 e3 binding domain NP567_17990 PF00364 Biotin-requiring enzyme NP567_17990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP567_17995 PF16870 2-oxoglutarate dehydrogenase C-terminal NP567_17995 PF02779 Transketolase, pyrimidine binding domain NP567_17995 PF00676 Dehydrogenase E1 component NP567_17995 PF16078 2-oxoglutarate dehydrogenase N-terminus NP567_18010 PF13085 2Fe-2S iron-sulfur cluster binding domain NP567_18015 PF02910 Fumarate reductase flavoprotein C-term NP567_18015 PF00890 FAD binding domain NP567_18020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP567_18025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP567_18030 PF00285 Citrate synthase, C-terminal domain NP567_18040 PF17773 UPF0176 acylphosphatase like domain NP567_18040 PF00581 Rhodanese-like domain NP567_18060 PF04542 Sigma-70 region 2 NP567_18060 PF04545 Sigma-70, region 4 NP567_18060 PF00140 Sigma-70 factor, region 1.2 NP567_18060 PF04546 Sigma-70, non-essential region NP567_18060 PF03979 Sigma-70 factor, region 1.1 NP567_18060 PF04539 Sigma-70 region 3 NP567_18065 PF04359 Protein of unknown function (DUF493) NP567_18070 PF03099 Biotin/lipoate A/B protein ligase family NP567_18085 PF13520 Amino acid permease NP567_18100 PF00588 SpoU rRNA Methylase family NP567_18110 PF02403 Seryl-tRNA synthetase N-terminal domain NP567_18110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP567_18125 PF01016 Ribosomal L27 protein NP567_18130 PF00829 Ribosomal prokaryotic L21 protein NP567_18140 PF00348 Polyprenyl synthetase NP567_18150 PF01569 PAP2 superfamily NP567_18155 PF00529 HlyD membrane-fusion protein of T1SS NP567_18155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP567_18165 PF02321 Outer membrane efflux protein NP567_18170 PF01906 Putative heavy-metal-binding NP567_18175 PF01906 Putative heavy-metal-binding NP567_18195 PF10458 Valyl tRNA synthetase tRNA binding arm NP567_18195 PF00133 tRNA synthetases class I (I, L, M and V) NP567_18195 PF08264 Anticodon-binding domain of tRNA NP567_18215 PF03466 LysR substrate binding domain NP567_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP567_18220 PF00909 Ammonium Transporter Family NP567_18230 PF00512 His Kinase A (phospho-acceptor) domain NP567_18230 PF08521 Two-component sensor kinase N-terminal NP567_18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_18235 PF00486 Transcriptional regulatory protein, C terminal NP567_18235 PF00072 Response regulator receiver domain NP567_18240 PF08019 Phosphoethanolamine transferase EptA/EptB NP567_18240 PF00884 Sulfatase NP567_18260 PF01734 Patatin-like phospholipase NP567_18270 PF01145 SPFH domain / Band 7 family NP567_18275 PF04237 YjbR NP567_18280 PF00348 Polyprenyl synthetase NP567_18285 PF04303 PrpF protein NP567_18300 PF01965 DJ-1/PfpI family NP567_18305 PF08990 Erythronolide synthase docking NP567_18305 PF09277 Erythronolide synthase, docking NP567_18305 PF00698 Acyl transferase domain NP567_18305 PF16197 Ketoacyl-synthetase C-terminal extension NP567_18305 PF00109 Beta-ketoacyl synthase, N-terminal domain NP567_18305 PF02801 Beta-ketoacyl synthase, C-terminal domain NP567_18305 PF08659 KR domain NP567_18305 PF00550 Phosphopantetheine attachment site NP567_18305 PF14765 Polyketide synthase dehydratase NP567_18305 PF08240 Alcohol dehydrogenase GroES-like domain NP567_18310 PF12833 Helix-turn-helix domain NP567_18310 PF06719 AraC-type transcriptional regulator N-terminus NP567_18335 PF02525 Flavodoxin-like fold NP567_18350 PF01507 Phosphoadenosine phosphosulfate reductase family NP567_18355 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NP567_18355 PF06974 Protein of unknown function (DUF1298) NP567_18365 PF10150 Ribonuclease E/G family NP567_18365 PF00575 S1 RNA binding domain NP567_18370 PF02545 Maf-like protein NP567_18380 PF04085 rod shape-determining protein MreC NP567_18390 PF02686 Glu-tRNAGln amidotransferase C subunit NP567_18395 PF01425 Amidase NP567_18400 PF02934 GatB/GatE catalytic domain NP567_18400 PF02637 GatB domain NP567_18435 PF13291 ACT domain NP567_18435 PF00291 Pyridoxal-phosphate dependent enzyme NP567_18440 PF01734 Patatin-like phospholipase NP567_18470 PF12805 FUSC-like inner membrane protein yccS NP567_18520 PF17969 L,D-transpeptidase C-terminal domain NP567_18520 PF03734 L,D-transpeptidase catalytic domain NP567_18525 PF04304 Protein of unknown function (DUF454) NP567_18535 PF08085 Entericidin EcnA/B family NP567_18540 PF01546 Peptidase family M20/M25/M40 NP567_18540 PF07687 Peptidase dimerisation domain NP567_18555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP567_18555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NP567_18565 PF00072 Response regulator receiver domain NP567_18570 PF00072 Response regulator receiver domain NP567_18585 PF00873 AcrB/AcrD/AcrF family NP567_18590 PF03129 Anticodon binding domain NP567_18590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP567_18590 PF04073 Aminoacyl-tRNA editing domain NP567_18595 PF07411 Domain of unknown function (DUF1508) NP567_18600 PF03831 PhnA domain NP567_18600 PF08274 PhnA Zinc-Ribbon NP567_18605 PF04343 Protein of unknown function, DUF488 NP567_18615 PF01571 Aminomethyltransferase folate-binding domain NP567_18620 PF10411 Disulfide bond isomerase protein N-terminus NP567_18620 PF13098 Thioredoxin-like domain NP567_18635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP567_18645 PF02245 Methylpurine-DNA glycosylase (MPG) NP567_18650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP567_18650 PF06827 Zinc finger found in FPG and IleRS NP567_18650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP567_18665 PF01741 Large-conductance mechanosensitive channel, MscL NP567_18670 PF00679 Elongation factor G C-terminus NP567_18670 PF00009 Elongation factor Tu GTP binding domain NP567_18670 PF03144 Elongation factor Tu domain 2 NP567_18675 PF00860 Permease family NP567_18685 PF00324 Amino acid permease NP567_18690 PF01139 tRNA-splicing ligase RtcB NP567_18700 PF00691 OmpA family NP567_18700 PF13505 Outer membrane protein beta-barrel domain NP567_18710 PF02803 Thiolase, C-terminal domain NP567_18710 PF00108 Thiolase, N-terminal domain NP567_18720 PF00893 Small Multidrug Resistance protein NP567_18730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP567_18730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP567_18735 PF01011 PQQ enzyme repeat NP567_18740 PF04966 Carbohydrate-selective porin, OprB family NP567_18750 PF02311 AraC-like ligand binding domain NP567_18750 PF12833 Helix-turn-helix domain NP567_18775 PF13673 Acetyltransferase (GNAT) domain NP567_18785 PF03006 Haemolysin-III related NP567_18790 PF00083 Sugar (and other) transporter NP567_18790 PF07690 Major Facilitator Superfamily NP567_18800 PF07517 SecA DEAD-like domain NP567_18800 PF07516 SecA Wing and Scaffold domain NP567_18800 PF01043 SecA preprotein cross-linking domain NP567_18800 PF02810 SEC-C motif NP567_18805 PF00578 AhpC/TSA family NP567_18805 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP567_18830 PF01039 Carboxyl transferase domain NP567_18835 PF00290 Tryptophan synthase alpha chain NP567_18860 PF00291 Pyridoxal-phosphate dependent enzyme NP567_18870 PF07715 TonB-dependent Receptor Plug Domain NP567_18870 PF00593 TonB dependent receptor NP567_18875 PF01923 Cobalamin adenosyltransferase NP567_18895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NP567_18900 PF00486 Transcriptional regulatory protein, C terminal NP567_18900 PF00072 Response regulator receiver domain NP567_18920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_18920 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_18920 PF12806 Acetyl-CoA dehydrogenase C-terminal like NP567_18920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_18925 PF06146 Phosphate-starvation-inducible E NP567_18955 PF01336 OB-fold nucleic acid binding domain NP567_18955 PF00152 tRNA synthetases class II (D, K and N) NP567_18955 PF02938 GAD domain NP567_18975 PF02350 UDP-N-acetylglucosamine 2-epimerase NP567_18990 PF00534 Glycosyl transferases group 1 NP567_18990 PF13439 Glycosyltransferase Family 4 NP567_19015 PF01063 Amino-transferase class IV NP567_19020 PF03710 Glutamate-ammonia ligase adenylyltransferase NP567_19020 PF08335 GlnD PII-uridylyltransferase NP567_19025 PF00512 His Kinase A (phospho-acceptor) domain NP567_19025 PF07689 KaiB domain NP567_19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP567_19070 PF01381 Helix-turn-helix NP567_19075 PF00872 Transposase, Mutator family NP567_19100 PF02547 Queuosine biosynthesis protein NP567_19115 PF01702 Queuine tRNA-ribosyltransferase NP567_19120 PF02699 Preprotein translocase subunit NP567_19130 PF07549 SecD/SecF GG Motif NP567_19130 PF02355 Protein export membrane protein NP567_19135 PF04127 DNA / pantothenate metabolism flavoprotein NP567_19135 PF02441 Flavoprotein NP567_19140 PF04002 RadC-like JAB domain NP567_19155 PF04279 Intracellular septation protein A NP567_19160 PF03795 YCII-related domain NP567_19170 PF01266 FAD dependent oxidoreductase NP567_19170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NP567_19190 PF13356 Arm DNA-binding domain NP567_19190 PF00589 Phage integrase family NP567_19190 PF14659 Phage integrase, N-terminal SAM-like domain NP567_19210 PF18766 SWI2/SNF2 ATPase NP567_19210 PF11867 Domain of unknown function (DUF3387) NP567_19210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NP567_19235 PF17191 RecG wedge domain NP567_19235 PF13749 Putative ATP-dependent DNA helicase recG C-terminal NP567_19235 PF00270 DEAD/DEAH box helicase NP567_19290 PF03061 Thioesterase superfamily NP567_19295 PF00085 Thioredoxin NP567_19300 PF00561 alpha/beta hydrolase fold NP567_19305 PF04273 Putative phosphatase (DUF442) NP567_19305 PF00753 Metallo-beta-lactamase superfamily NP567_19315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP567_19315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP567_19350 PF17152 Periplasmic sensor domain NP567_19350 PF00990 Diguanylate cyclase, GGDEF domain NP567_19355 PF00691 OmpA family NP567_19355 PF01389 OmpA-like transmembrane domain NP567_19360 PF10518 TAT (twin-arginine translocation) pathway signal sequence NP567_19360 PF00149 Calcineurin-like phosphoesterase NP567_19375 PF16360 GTP-binding GTPase Middle Region NP567_19375 PF13167 GTP-binding GTPase N-terminal NP567_19375 PF01926 50S ribosome-binding GTPase NP567_19395 PF00149 Calcineurin-like phosphoesterase NP567_19400 PF00398 Ribosomal RNA adenine dimethylase NP567_19405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NP567_19410 PF00572 Ribosomal protein L13 NP567_19415 PF00380 Ribosomal protein S9/S16 NP567_19420 PF13417 Glutathione S-transferase, N-terminal domain NP567_19420 PF00043 Glutathione S-transferase, C-terminal domain NP567_19425 PF04386 Stringent starvation protein B NP567_19445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_19445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_19445 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_19450 PF01039 Carboxyl transferase domain NP567_19465 PF17932 Tetracyclin repressor-like, C-terminal domain NP567_19465 PF00440 Bacterial regulatory proteins, tetR family NP567_19470 PF02770 Acyl-CoA dehydrogenase, middle domain NP567_19470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP567_19470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP567_19515 PF01066 CDP-alcohol phosphatidyltransferase NP567_19520 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NP567_19540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP567_19540 PF00056 lactate/malate dehydrogenase, NAD binding domain NP567_19550 PF01551 Peptidase family M23 NP567_19550 PF10145 Phage-related minor tail protein NP567_19550 PF01464 Transglycosylase SLT domain NP567_19555 PF00919 Uncharacterized protein family UPF0004 NP567_19555 PF01938 TRAM domain NP567_19555 PF04055 Radical SAM superfamily NP567_19560 PF02562 PhoH-like protein NP567_19565 PF02130 Uncharacterized protein family UPF0054 NP567_19590 PF03358 NADPH-dependent FMN reductase NP567_19595 PF03631 Virulence factor BrkB NP567_19600 PF00892 EamA-like transporter family NP567_19605 PF12833 Helix-turn-helix domain NP567_19610 PF01557 Fumarylacetoacetate (FAA) hydrolase family NP567_19655 PF17876 Cold shock domain NP567_19655 PF08461 Ribonuclease R winged-helix domain NP567_19655 PF08206 Ribonuclease B OB domain NP567_19655 PF00773 RNB domain NP567_19655 PF00575 S1 RNA binding domain NP567_19660 PF01432 Peptidase family M3 NP567_19665 PF09526 Probable metal-binding protein (DUF2387) NP567_19695 PF03937 Flavinator of succinate dehydrogenase