locus-tag class description ABD1_00010 PF11638 DnaA N-terminal domain ABD1_00010 PF08299 Bacterial dnaA protein helix-turn-helix ABD1_00010 PF00308 Bacterial dnaA protein ABD1_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain ABD1_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain ABD1_00020 PF02767 DNA polymerase III beta subunit, central domain ABD1_00030 PF02463 RecF/RecN/SMC N terminal domain ABD1_00040 PF00204 DNA gyrase B ABD1_00040 PF00986 DNA gyrase B subunit, carboxyl terminus ABD1_00040 PF01751 Toprim domain ABD1_00040 PF18053 DNA gyrase B subunit insert domain ABD1_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_00060 PF09335 SNARE associated Golgi protein ABD1_00070 PF00005 ABC transporter ABD1_00070 PF12848 ABC transporter ABD1_00110 PF01521 Iron-sulphur cluster biosynthesis ABD1_00120 PF00561 alpha/beta hydrolase fold ABD1_00130 PF03702 Anhydro-N-acetylmuramic acid kinase ABD1_00140 PF00579 tRNA synthetases class I (W and Y) ABD1_00170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_00180 PF01252 Signal peptidase (SPase) II ABD1_00190 PF08264 Anticodon-binding domain of tRNA ABD1_00190 PF00133 tRNA synthetases class I (I, L, M and V) ABD1_00190 PF06827 Zinc finger found in FPG and IleRS ABD1_00200 PF06574 FAD synthetase ABD1_00200 PF01687 Riboflavin kinase ABD1_00220 PF01048 Phosphorylase superfamily ABD1_00230 PF00440 Bacterial regulatory proteins, tetR family ABD1_00230 PF08362 YcdC-like protein, C-terminal region ABD1_00240 PF00005 ABC transporter ABD1_00250 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_00260 PF00296 Luciferase-like monooxygenase ABD1_00270 PF09084 NMT1/THI5 like ABD1_00280 PF09084 NMT1/THI5 like ABD1_00290 PF00583 Acetyltransferase (GNAT) family ABD1_00290 PF00696 Amino acid kinase family ABD1_00320 PF00106 short chain dehydrogenase ABD1_00330 PF13419 Haloacid dehalogenase-like hydrolase ABD1_00350 PF01323 DSBA-like thioredoxin domain ABD1_00360 PF08360 QacR-like protein, C-terminal region ABD1_00360 PF00440 Bacterial regulatory proteins, tetR family ABD1_00370 PF00440 Bacterial regulatory proteins, tetR family ABD1_00380 PF00175 Oxidoreductase NAD-binding domain ABD1_00390 PF00487 Fatty acid desaturase ABD1_00400 PF01138 3' exoribonuclease family, domain 1 ABD1_00400 PF03725 3' exoribonuclease family, domain 2 ABD1_00420 PF04185 Phosphoesterase family ABD1_00420 PF05506 Domain of unknown function (DUF756) ABD1_00440 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABD1_00440 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABD1_00450 PF01510 N-acetylmuramoyl-L-alanine amidase ABD1_00460 PF03023 Lipid II flippase MurJ ABD1_00470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABD1_00470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_00480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABD1_00480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_00490 PF13807 G-rich domain on putative tyrosine kinase ABD1_00490 PF13614 AAA domain ABD1_00490 PF02706 Chain length determinant protein ABD1_00500 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABD1_00510 PF02563 Polysaccharide biosynthesis/export protein ABD1_00510 PF10531 SLBB domain ABD1_00510 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABD1_00520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABD1_00520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABD1_00520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABD1_00530 PF01370 NAD dependent epimerase/dehydratase family ABD1_00580 PF02719 Polysaccharide biosynthesis protein ABD1_00580 PF08485 Polysaccharide biosynthesis protein C-terminal ABD1_00590 PF01370 NAD dependent epimerase/dehydratase family ABD1_00600 PF02350 UDP-N-acetylglucosamine 2-epimerase ABD1_00610 PF13579 Glycosyl transferase 4-like domain ABD1_00620 PF01370 NAD dependent epimerase/dehydratase family ABD1_00630 PF00953 Glycosyl transferase family 4 ABD1_00640 PF02397 Bacterial sugar transferase ABD1_00650 PF00483 Nucleotidyl transferase ABD1_00660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABD1_00660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABD1_00660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABD1_00670 PF00342 Phosphoglucose isomerase ABD1_00680 PF16363 GDP-mannose 4,6 dehydratase ABD1_00690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABD1_00690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABD1_00690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABD1_00690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABD1_00700 PF02652 L-lactate permease ABD1_00710 PF00392 Bacterial regulatory proteins, gntR family ABD1_00710 PF07729 FCD domain ABD1_00720 PF01070 FMN-dependent dehydrogenase ABD1_00730 PF01565 FAD binding domain ABD1_00730 PF09330 D-lactate dehydrogenase, membrane binding ABD1_00740 PF00155 Aminotransferase class I and II ABD1_00750 PF00392 Bacterial regulatory proteins, gntR family ABD1_00750 PF07729 FCD domain ABD1_00770 PF00285 Citrate synthase, C-terminal domain ABD1_00780 PF00694 Aconitase C-terminal domain ABD1_00780 PF00330 Aconitase family (aconitate hydratase) ABD1_00880 PF08361 MAATS-type transcriptional repressor, C-terminal region ABD1_00880 PF00440 Bacterial regulatory proteins, tetR family ABD1_00910 PF00849 RNA pseudouridylate synthase ABD1_00940 PF07715 TonB-dependent Receptor Plug Domain ABD1_00940 PF00593 TonB dependent receptor ABD1_00960 PF01037 Lrp/AsnC ligand binding domain ABD1_00970 PF01266 FAD dependent oxidoreductase ABD1_00980 PF01168 Alanine racemase, N-terminal domain ABD1_00980 PF00842 Alanine racemase, C-terminal domain ABD1_00990 PF01042 Endoribonuclease L-PSP ABD1_01000 PF00324 Amino acid permease ABD1_01010 PF00324 Amino acid permease ABD1_01030 PF00171 Aldehyde dehydrogenase family ABD1_01040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABD1_01040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABD1_01050 PF00501 AMP-binding enzyme ABD1_01050 PF13193 AMP-binding enzyme C-terminal domain ABD1_01060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_01060 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_01060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_01070 PF00378 Enoyl-CoA hydratase/isomerase ABD1_01080 PF00378 Enoyl-CoA hydratase/isomerase ABD1_01090 PF00083 Sugar (and other) transporter ABD1_01090 PF07690 Major Facilitator Superfamily ABD1_01100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABD1_01100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABD1_01110 PF13193 AMP-binding enzyme C-terminal domain ABD1_01110 PF00501 AMP-binding enzyme ABD1_01130 PF00834 Ribulose-phosphate 3 epimerase family ABD1_01140 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABD1_01150 PF00765 Autoinducer synthase ABD1_01170 PF00196 Bacterial regulatory proteins, luxR family ABD1_01170 PF03472 Autoinducer binding domain ABD1_01180 PF00501 AMP-binding enzyme ABD1_01190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_01190 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_01190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_01200 PF00109 Beta-ketoacyl synthase, N-terminal domain ABD1_01200 PF00550 Phosphopantetheine attachment site ABD1_01200 PF08242 Methyltransferase domain ABD1_01200 PF00975 Thioesterase domain ABD1_01200 PF02801 Beta-ketoacyl synthase, C-terminal domain ABD1_01200 PF16197 Ketoacyl-synthetase C-terminal extension ABD1_01200 PF14765 Polyketide synthase dehydratase ABD1_01210 PF00550 Phosphopantetheine attachment site ABD1_01210 PF00501 AMP-binding enzyme ABD1_01210 PF00975 Thioesterase domain ABD1_01210 PF13193 AMP-binding enzyme C-terminal domain ABD1_01210 PF00668 Condensation domain ABD1_01240 PF16363 GDP-mannose 4,6 dehydratase ABD1_01250 PF01648 4'-phosphopantetheinyl transferase superfamily ABD1_01260 PF01722 BolA-like protein ABD1_01280 PF13614 AAA domain ABD1_01310 PF09335 SNARE associated Golgi protein ABD1_01320 PF07681 DoxX ABD1_01330 PF04286 Protein of unknown function (DUF445) ABD1_01340 PF00117 Glutamine amidotransferase class-I ABD1_01340 PF02540 NAD synthase ABD1_01340 PF00958 GMP synthase C terminal domain ABD1_01350 PF01909 Nucleotidyltransferase domain ABD1_01350 PF13427 Domain of unknown function (DUF4111) ABD1_01360 PF03551 Transcriptional regulator PadR-like family ABD1_01380 PF02678 Pirin ABD1_01380 PF05726 Pirin C-terminal cupin domain ABD1_01420 PF00750 tRNA synthetases class I (R) ABD1_01420 PF05746 DALR anticodon binding domain ABD1_01420 PF03485 Arginyl tRNA synthetase N terminal domain ABD1_01430 PF03949 Malic enzyme, NAD binding domain ABD1_01430 PF00390 Malic enzyme, N-terminal domain ABD1_01440 PF04261 Dyp-type peroxidase family ABD1_01450 PF01810 LysE type translocator ABD1_01460 PF00950 ABC 3 transport family ABD1_01470 PF00005 ABC transporter ABD1_01510 PF00119 ATP synthase A chain ABD1_01520 PF00137 ATP synthase subunit C ABD1_01530 PF00430 ATP synthase B/B' CF(0) ABD1_01540 PF00213 ATP synthase delta (OSCP) subunit ABD1_01550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABD1_01550 PF00306 ATP synthase alpha/beta chain, C terminal domain ABD1_01550 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABD1_01560 PF00231 ATP synthase ABD1_01570 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABD1_01570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABD1_01580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABD1_01600 PF00255 Glutathione peroxidase ABD1_01620 PF07690 Major Facilitator Superfamily ABD1_01630 PF00440 Bacterial regulatory proteins, tetR family ABD1_01640 PF00892 EamA-like transporter family ABD1_01650 PF01300 Telomere recombination ABD1_01660 PF17782 DprA winged helix domain ABD1_01660 PF02481 DNA recombination-mediator protein A ABD1_01680 PF01327 Polypeptide deformylase ABD1_01730 PF00440 Bacterial regulatory proteins, tetR family ABD1_01750 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_01770 PF03358 NADPH-dependent FMN reductase ABD1_01810 PF08497 Radical SAM N-terminal ABD1_01810 PF04055 Radical SAM superfamily ABD1_01810 PF11842 Domain of unknown function (DUF3362) ABD1_01840 PF00817 impB/mucB/samB family ABD1_01840 PF11798 IMS family HHH motif ABD1_01840 PF11799 impB/mucB/samB family C-terminal domain ABD1_01860 PF07690 Major Facilitator Superfamily ABD1_01870 PF03641 Possible lysine decarboxylase ABD1_01880 PF03741 Integral membrane protein TerC family ABD1_01880 PF03471 Transporter associated domain ABD1_01890 PF02810 SEC-C motif ABD1_01900 PF03458 UPF0126 domain ABD1_01910 PF07690 Major Facilitator Superfamily ABD1_01920 PF03989 DNA gyrase C-terminal domain, beta-propeller ABD1_01920 PF00521 DNA gyrase/topoisomerase IV, subunit A ABD1_01930 PF13193 AMP-binding enzyme C-terminal domain ABD1_01930 PF00501 AMP-binding enzyme ABD1_01960 PF00719 Inorganic pyrophosphatase ABD1_01970 PF03573 outer membrane porin, OprD family ABD1_01990 PF00701 Dihydrodipicolinate synthetase family ABD1_02010 PF00155 Aminotransferase class I and II ABD1_02010 PF00392 Bacterial regulatory proteins, gntR family ABD1_02020 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABD1_02020 PF01078 Magnesium chelatase, subunit ChlI ABD1_02040 PF00543 Nitrogen regulatory protein P-II ABD1_02050 PF00909 Ammonium Transporter Family ABD1_02060 PF03477 ATP cone domain ABD1_02070 PF01872 RibD C-terminal domain ABD1_02070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABD1_02090 PF00677 Lumazine binding domain ABD1_02130 PF00883 Cytosol aminopeptidase family, catalytic domain ABD1_02130 PF02789 Cytosol aminopeptidase family, N-terminal domain ABD1_02150 PF03739 Lipopolysaccharide export system permease LptF/LptG ABD1_02160 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABD1_02160 PF01676 Metalloenzyme superfamily ABD1_02170 PF00595 PDZ domain ABD1_02170 PF03572 Peptidase family S41 ABD1_02180 PF00072 Response regulator receiver domain ABD1_02180 PF02954 Bacterial regulatory protein, Fis family ABD1_02180 PF00158 Sigma-54 interaction domain ABD1_02190 PF00512 His Kinase A (phospho-acceptor) domain ABD1_02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_02200 PF00196 Bacterial regulatory proteins, luxR family ABD1_02200 PF00072 Response regulator receiver domain ABD1_02210 PF00768 D-alanyl-D-alanine carboxypeptidase ABD1_02220 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_02230 PF03447 Homoserine dehydrogenase, NAD binding domain ABD1_02230 PF00742 Homoserine dehydrogenase ABD1_02230 PF01842 ACT domain ABD1_02240 PF13098 Thioredoxin-like domain ABD1_02240 PF10411 Disulfide bond isomerase protein N-terminus ABD1_02250 PF02899 Phage integrase, N-terminal SAM-like domain ABD1_02250 PF00589 Phage integrase family ABD1_02270 PF07664 Ferrous iron transport protein B C terminus ABD1_02270 PF07670 Nucleoside recognition ABD1_02270 PF02421 Ferrous iron transport protein B ABD1_02290 PF08245 Mur ligase middle domain ABD1_02290 PF02875 Mur ligase family, glutamate ligase domain ABD1_02300 PF01098 Cell cycle protein ABD1_02310 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABD1_02320 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABD1_02330 PF00149 Calcineurin-like phosphoesterase ABD1_02340 PF00293 NUDIX domain ABD1_02350 PF01964 Radical SAM ThiC family ABD1_02350 PF13667 ThiC-associated domain ABD1_02380 PF00892 EamA-like transporter family ABD1_02390 PF02321 Outer membrane efflux protein ABD1_02400 PF01895 PhoU domain ABD1_02410 PF04362 Bacterial Fe(2+) trafficking ABD1_02420 PF14698 Argininosuccinate lyase C-terminal ABD1_02420 PF00206 Lyase ABD1_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_02430 PF06580 Histidine kinase ABD1_02430 PF07694 5TMR of 5TMR-LYT ABD1_02440 PF00072 Response regulator receiver domain ABD1_02440 PF04397 LytTr DNA-binding domain ABD1_02450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABD1_02450 PF03900 Porphobilinogen deaminase, C-terminal domain ABD1_02500 PF00816 H-NS histone family ABD1_02530 PF00263 Bacterial type II and III secretion system protein ABD1_02530 PF03958 Bacterial type II/III secretion system short domain ABD1_02540 PF00498 FHA domain ABD1_02540 PF12401 Protein of unknown function (DUF2662) ABD1_02550 PF13419 Haloacid dehalogenase-like hydrolase ABD1_02560 PF04715 Anthranilate synthase component I, N terminal region ABD1_02560 PF00425 chorismate binding enzyme ABD1_02570 PF03143 Elongation factor Tu C-terminal domain ABD1_02570 PF03144 Elongation factor Tu domain 2 ABD1_02570 PF00009 Elongation factor Tu GTP binding domain ABD1_02580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABD1_02590 PF02357 Transcription termination factor nusG ABD1_02590 PF00467 KOW motif ABD1_02600 PF03946 Ribosomal protein L11, N-terminal domain ABD1_02600 PF00298 Ribosomal protein L11, RNA binding domain ABD1_02610 PF00687 Ribosomal protein L1p/L10e family ABD1_02620 PF00466 Ribosomal protein L10 ABD1_02630 PF16320 Ribosomal protein L7/L12 dimerisation domain ABD1_02630 PF00542 Ribosomal protein L7/L12 C-terminal domain ABD1_02640 PF04560 RNA polymerase Rpb2, domain 7 ABD1_02640 PF00562 RNA polymerase Rpb2, domain 6 ABD1_02640 PF10385 RNA polymerase beta subunit external 1 domain ABD1_02640 PF04563 RNA polymerase beta subunit ABD1_02640 PF04561 RNA polymerase Rpb2, domain 2 ABD1_02640 PF04565 RNA polymerase Rpb2, domain 3 ABD1_02650 PF04997 RNA polymerase Rpb1, domain 1 ABD1_02650 PF04983 RNA polymerase Rpb1, domain 3 ABD1_02650 PF05000 RNA polymerase Rpb1, domain 4 ABD1_02650 PF04998 RNA polymerase Rpb1, domain 5 ABD1_02650 PF00623 RNA polymerase Rpb1, domain 2 ABD1_02700 PF13726 Na+-H+ antiporter family ABD1_02700 PF03553 Na+/H+ antiporter family ABD1_02730 PF00183 Hsp90 protein ABD1_02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_02760 PF01323 DSBA-like thioredoxin domain ABD1_02780 PF00376 MerR family regulatory protein ABD1_02780 PF09278 MerR, DNA binding ABD1_02820 PF00108 Thiolase, N-terminal domain ABD1_02820 PF02803 Thiolase, C-terminal domain ABD1_02830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABD1_02830 PF00378 Enoyl-CoA hydratase/isomerase ABD1_02830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABD1_02870 PF01541 GIY-YIG catalytic domain ABD1_02870 PF02151 UvrB/uvrC motif ABD1_02870 PF08459 UvrC Helix-hairpin-helix N-terminal ABD1_02890 PF01066 CDP-alcohol phosphatidyltransferase ABD1_02900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABD1_02900 PF12833 Helix-turn-helix domain ABD1_02900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABD1_02900 PF02805 Metal binding domain of Ada ABD1_02940 PF13533 Biotin-lipoyl like ABD1_02950 PF03652 Holliday junction resolvase ABD1_02960 PF02622 Uncharacterized ACR, COG1678 ABD1_02970 PF02463 RecF/RecN/SMC N terminal domain ABD1_02990 PF06865 Pyrimidine/purine nucleoside phosphorylase ABD1_03000 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABD1_03000 PF00588 SpoU rRNA Methylase family ABD1_03020 PF01121 Dephospho-CoA kinase ABD1_03030 PF01478 Type IV leader peptidase family ABD1_03030 PF06750 Bacterial Peptidase A24 N-terminal domain ABD1_03040 PF00482 Type II secretion system (T2SS), protein F ABD1_03050 PF00437 Type II/IV secretion system protein ABD1_03050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABD1_03060 PF00121 Triosephosphate isomerase ABD1_03070 PF03840 Preprotein translocase SecG subunit ABD1_03080 PF17384 RimP C-terminal SH3 domain ABD1_03080 PF02576 RimP N-terminal domain ABD1_03090 PF13184 NusA-like KH domain ABD1_03090 PF08529 NusA N-terminal domain ABD1_03090 PF00575 S1 RNA binding domain ABD1_03100 PF11987 Translation-initiation factor 2 ABD1_03100 PF04760 Translation initiation factor IF-2, N-terminal region ABD1_03100 PF00009 Elongation factor Tu GTP binding domain ABD1_03100 PF08364 Bacterial translation initiation factor IF-2 associated region ABD1_03110 PF02033 Ribosome-binding factor A ABD1_03130 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABD1_03150 PF00361 Proton-conducting membrane transporter ABD1_03160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABD1_03170 PF13244 Domain of unknown function (DUF4040) ABD1_03170 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABD1_03170 PF00361 Proton-conducting membrane transporter ABD1_03170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABD1_03200 PF01502 Phosphoribosyl-AMP cyclohydrolase ABD1_03210 PF01494 FAD binding domain ABD1_03220 PF03109 ABC1 family ABD1_03240 PF01209 ubiE/COQ5 methyltransferase family ABD1_03260 PF03976 Polyphosphate kinase 2 (PPK2) ABD1_03280 PF17946 RecC C-terminal domain ABD1_03290 PF00580 UvrD/REP helicase N-terminal domain ABD1_03290 PF12705 PD-(D/E)XK nuclease superfamily ABD1_03290 PF13361 UvrD-like helicase C-terminal domain ABD1_03300 PF13538 UvrD-like helicase C-terminal domain ABD1_03320 PF00312 Ribosomal protein S15 ABD1_03330 PF00013 KH domain ABD1_03330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABD1_03330 PF01138 3' exoribonuclease family, domain 1 ABD1_03330 PF03725 3' exoribonuclease family, domain 2 ABD1_03330 PF00575 S1 RNA binding domain ABD1_03340 PF01544 CorA-like Mg2+ transporter protein ABD1_03360 PF01556 DnaJ C terminal domain ABD1_03360 PF00226 DnaJ domain ABD1_03380 PF01430 Hsp33 protein ABD1_03390 PF02254 TrkA-N domain ABD1_03390 PF00999 Sodium/hydrogen exchanger family ABD1_03400 PF18074 Primosomal protein N C-terminal domain ABD1_03400 PF00271 Helicase conserved C-terminal domain ABD1_03400 PF17764 3′ DNA-binding domain (3′BD) ABD1_03400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABD1_03400 PF00270 DEAD/DEAH box helicase ABD1_03410 PF00482 Type II secretion system (T2SS), protein F ABD1_03420 PF07963 Prokaryotic N-terminal methylation motif ABD1_03420 PF08334 Type II secretion system (T2SS), protein G ABD1_03440 PF01588 Putative tRNA binding domain ABD1_03450 PF00795 Carbon-nitrogen hydrolase ABD1_03460 PF03471 Transporter associated domain ABD1_03460 PF00571 CBS domain ABD1_03470 PF01206 Sulfurtransferase TusA ABD1_03510 PF01177 Asp/Glu/Hydantoin racemase ABD1_03530 PF00762 Ferrochelatase ABD1_03540 PF00753 Metallo-beta-lactamase superfamily ABD1_03550 PF03884 DNA gyrase inhibitor YacG ABD1_03590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABD1_03610 PF01197 Ribosomal protein L31 ABD1_03620 PF03109 ABC1 family ABD1_03630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABD1_03630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_03640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_03640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABD1_03640 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_03650 PF01554 MatE ABD1_03670 PF04055 Radical SAM superfamily ABD1_03670 PF06969 HemN C-terminal domain ABD1_03690 PF03466 LysR substrate binding domain ABD1_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_03700 PF00501 AMP-binding enzyme ABD1_03700 PF13193 AMP-binding enzyme C-terminal domain ABD1_03710 PF12111 Polyribonucleotide phosphorylase C terminal ABD1_03710 PF10150 Ribonuclease E/G family ABD1_03710 PF00575 S1 RNA binding domain ABD1_03730 PF00849 RNA pseudouridylate synthase ABD1_03730 PF01479 S4 domain ABD1_03740 PF13419 Haloacid dehalogenase-like hydrolase ABD1_03750 PF08279 HTH domain ABD1_03750 PF13280 WYL domain ABD1_03760 PF02798 Glutathione S-transferase, N-terminal domain ABD1_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_03780 PF03466 LysR substrate binding domain ABD1_03790 PF12706 Beta-lactamase superfamily domain ABD1_03800 PF00141 Peroxidase ABD1_03810 PF00141 Peroxidase ABD1_03820 PF01590 GAF domain ABD1_03820 PF02896 PEP-utilising enzyme, TIM barrel domain ABD1_03820 PF00391 PEP-utilising enzyme, mobile domain ABD1_03820 PF05524 PEP-utilising enzyme, N-terminal ABD1_03830 PF00293 NUDIX domain ABD1_03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_03850 PF03466 LysR substrate binding domain ABD1_03870 PF00330 Aconitase family (aconitate hydratase) ABD1_03880 PF00694 Aconitase C-terminal domain ABD1_03900 PF00180 Isocitrate/isopropylmalate dehydrogenase ABD1_03920 PF01176 Translation initiation factor 1A / IF-1 ABD1_03940 PF01416 tRNA pseudouridine synthase ABD1_03980 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABD1_03980 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABD1_04000 PF00375 Sodium:dicarboxylate symporter family ABD1_04020 PF03279 Bacterial lipid A biosynthesis acyltransferase ABD1_04030 PF01810 LysE type translocator ABD1_04060 PF00107 Zinc-binding dehydrogenase ABD1_04060 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_04070 PF01638 HxlR-like helix-turn-helix ABD1_04090 PF01751 Toprim domain ABD1_04090 PF01396 Topoisomerase DNA binding C4 zinc finger ABD1_04090 PF01131 DNA topoisomerase ABD1_04090 PF08272 Topoisomerase I zinc-ribbon-like ABD1_04120 PF13361 UvrD-like helicase C-terminal domain ABD1_04120 PF00580 UvrD/REP helicase N-terminal domain ABD1_04130 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABD1_04170 PF00999 Sodium/hydrogen exchanger family ABD1_04170 PF02254 TrkA-N domain ABD1_04180 PF00471 Ribosomal protein L33 ABD1_04190 PF00830 Ribosomal L28 family ABD1_04200 PF00171 Aldehyde dehydrogenase family ABD1_04220 PF00551 Formyl transferase ABD1_04220 PF01842 ACT domain ABD1_04240 PF01618 MotA/TolQ/ExbB proton channel family ABD1_04260 PF01625 Peptide methionine sulfoxide reductase ABD1_04280 PF00186 Dihydrofolate reductase ABD1_04290 PF00303 Thymidylate synthase ABD1_04320 PF01790 Prolipoprotein diacylglyceryl transferase ABD1_04360 PF00902 Sec-independent protein translocase protein (TatC) ABD1_04370 PF02416 mttA/Hcf106 family ABD1_04380 PF02416 mttA/Hcf106 family ABD1_04400 PF01725 Ham1 family ABD1_04430 PF07021 Methionine biosynthesis protein MetW ABD1_04430 PF00561 alpha/beta hydrolase fold ABD1_04440 PF00561 alpha/beta hydrolase fold ABD1_04450 PF08502 LeuA allosteric (dimerisation) domain ABD1_04450 PF00682 HMGL-like ABD1_04460 PF18331 PKHD-type hydroxylase C-terminal domain ABD1_04460 PF13640 2OG-Fe(II) oxygenase superfamily ABD1_04470 PF07715 TonB-dependent Receptor Plug Domain ABD1_04470 PF00593 TonB dependent receptor ABD1_04480 PF05698 Bacterial trigger factor protein (TF) C-terminus ABD1_04480 PF05697 Bacterial trigger factor protein (TF) ABD1_04480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_04490 PF00574 Clp protease ABD1_04500 PF10431 C-terminal, D2-small domain, of ClpB protein ABD1_04500 PF07724 AAA domain (Cdc48 subfamily) ABD1_04500 PF06689 ClpX C4-type zinc finger ABD1_04530 PF05683 Fumarase C-terminus ABD1_04530 PF05681 Fumarate hydratase (Fumerase) ABD1_04540 PF07085 DRTGG domain ABD1_04540 PF01515 Phosphate acetyl/butaryl transferase ABD1_04550 PF00871 Acetokinase family ABD1_04560 PF00920 Dehydratase family ABD1_04570 PF01081 KDPG and KHG aldolase ABD1_04580 PF02447 GntP family permease ABD1_04590 PF01202 Shikimate kinase ABD1_04600 PF00171 Aldehyde dehydrogenase family ABD1_04610 PF00171 Aldehyde dehydrogenase family ABD1_04620 PF00561 alpha/beta hydrolase fold ABD1_04640 PF00933 Glycosyl hydrolase family 3 N terminal domain ABD1_04650 PF11818 C-terminal domain of tail specific protease (DUF3340) ABD1_04650 PF00595 PDZ domain ABD1_04650 PF17804 Tail specific protease N-terminal domain ABD1_04650 PF03572 Peptidase family S41 ABD1_04660 PF00534 Glycosyl transferases group 1 ABD1_04660 PF13439 Glycosyltransferase Family 4 ABD1_04670 PF01569 PAP2 superfamily ABD1_04680 PF04384 Iron-sulphur cluster assembly ABD1_04690 PF00334 Nucleoside diphosphate kinase ABD1_04700 PF04055 Radical SAM superfamily ABD1_04720 PF13464 Domain of unknown function (DUF4115) ABD1_04730 PF04551 GcpE protein ABD1_04740 PF03129 Anticodon binding domain ABD1_04740 PF13393 Histidyl-tRNA synthetase ABD1_04760 PF13360 PQQ-like domain ABD1_04770 PF01926 50S ribosome-binding GTPase ABD1_04770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABD1_04800 PF00550 Phosphopantetheine attachment site ABD1_04810 PF00550 Phosphopantetheine attachment site ABD1_04830 PF13193 AMP-binding enzyme C-terminal domain ABD1_04830 PF00501 AMP-binding enzyme ABD1_04840 PF00535 Glycosyl transferase family 2 ABD1_04860 PF00221 Aromatic amino acid lyase ABD1_04900 PF04820 Tryptophan halogenase ABD1_04920 PF00109 Beta-ketoacyl synthase, N-terminal domain ABD1_04920 PF02801 Beta-ketoacyl synthase, C-terminal domain ABD1_04950 PF02801 Beta-ketoacyl synthase, C-terminal domain ABD1_04950 PF00109 Beta-ketoacyl synthase, N-terminal domain ABD1_04980 PF02556 Preprotein translocase subunit SecB ABD1_04990 PF00462 Glutaredoxin ABD1_05010 PF03193 RsgA GTPase ABD1_05020 PF00929 Exonuclease ABD1_05050 PF02321 Outer membrane efflux protein ABD1_05060 PF00005 ABC transporter ABD1_05060 PF02687 FtsX-like permease family ABD1_05060 PF12704 MacB-like periplasmic core domain ABD1_05070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_05100 PF08264 Anticodon-binding domain of tRNA ABD1_05100 PF00133 tRNA synthetases class I (I, L, M and V) ABD1_05100 PF13603 Leucyl-tRNA synthetase, Domain 2 ABD1_05100 PF09334 tRNA synthetases class I (M) ABD1_05120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABD1_05120 PF00205 Thiamine pyrophosphate enzyme, central domain ABD1_05120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABD1_05130 PF10369 Small subunit of acetolactate synthase ABD1_05140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABD1_05140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABD1_05150 PF00990 Diguanylate cyclase, GGDEF domain ABD1_05150 PF03707 Bacterial signalling protein N terminal repeat ABD1_05150 PF00563 EAL domain ABD1_05180 PF03144 Elongation factor Tu domain 2 ABD1_05180 PF16658 Class II release factor RF3, C-terminal domain ABD1_05180 PF00009 Elongation factor Tu GTP binding domain ABD1_05210 PF01026 TatD related DNase ABD1_05220 PF00330 Aconitase family (aconitate hydratase) ABD1_05220 PF00694 Aconitase C-terminal domain ABD1_05230 PF00899 ThiF family ABD1_05250 PF03466 LysR substrate binding domain ABD1_05250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_05270 PF01207 Dihydrouridine synthase (Dus) ABD1_05280 PF00589 Phage integrase family ABD1_05340 PF03887 YfbU domain ABD1_05380 PF01037 Lrp/AsnC ligand binding domain ABD1_05400 PF00324 Amino acid permease ABD1_05410 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_05410 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABD1_05420 PF00202 Aminotransferase class-III ABD1_05430 PF04958 Arginine N-succinyltransferase beta subunit ABD1_05440 PF00171 Aldehyde dehydrogenase family ABD1_05450 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABD1_05460 PF00083 Sugar (and other) transporter ABD1_05460 PF07690 Major Facilitator Superfamily ABD1_05470 PF00596 Class II Aldolase and Adducin N-terminal domain ABD1_05480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABD1_05490 PF07687 Peptidase dimerisation domain ABD1_05490 PF01546 Peptidase family M20/M25/M40 ABD1_05500 PF00850 Histone deacetylase domain ABD1_05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_05510 PF03466 LysR substrate binding domain ABD1_05630 PF02384 N-6 DNA Methylase ABD1_05640 PF00270 DEAD/DEAH box helicase ABD1_05640 PF13749 Putative ATP-dependent DNA helicase recG C-terminal ABD1_05640 PF17191 RecG wedge domain ABD1_05660 PF01420 Type I restriction modification DNA specificity domain ABD1_05690 PF18766 SWI2/SNF2 ATPase ABD1_05690 PF11867 Domain of unknown function (DUF3387) ABD1_05690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABD1_05700 PF07690 Major Facilitator Superfamily ABD1_05720 PF00892 EamA-like transporter family ABD1_05730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABD1_05730 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABD1_05740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABD1_05750 PF02233 NAD(P) transhydrogenase beta subunit ABD1_05760 PF00106 short chain dehydrogenase ABD1_05780 PF01261 Xylose isomerase-like TIM barrel ABD1_05790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABD1_05790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABD1_05800 PF00378 Enoyl-CoA hydratase/isomerase ABD1_05810 PF00072 Response regulator receiver domain ABD1_05810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABD1_05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_05810 PF01627 Hpt domain ABD1_05810 PF00512 His Kinase A (phospho-acceptor) domain ABD1_05810 PF00672 HAMP domain ABD1_05820 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_05840 PF05958 tRNA (Uracil-5-)-methyltransferase ABD1_05850 PF02824 TGS domain ABD1_05850 PF04607 Region found in RelA / SpoT proteins ABD1_05850 PF13291 ACT domain ABD1_05870 PF03819 MazG nucleotide pyrophosphohydrolase domain ABD1_05890 PF01743 Poly A polymerase head domain ABD1_05890 PF12627 Probable RNA and SrmB- binding site of polymerase A ABD1_05890 PF12626 Polymerase A arginine-rich C-terminus ABD1_05900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABD1_05910 PF02548 Ketopantoate hydroxymethyltransferase ABD1_05920 PF02569 Pantoate-beta-alanine ligase ABD1_05930 PF03668 P-loop ATPase protein family ABD1_05940 PF00381 PTS HPr component phosphorylation site ABD1_05950 PF04751 Protein of unknown function (DUF615) ABD1_05960 PF00501 AMP-binding enzyme ABD1_05960 PF13193 AMP-binding enzyme C-terminal domain ABD1_05970 PF03129 Anticodon binding domain ABD1_05970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABD1_05970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABD1_05970 PF02824 TGS domain ABD1_05980 PF05198 Translation initiation factor IF-3, N-terminal domain ABD1_05980 PF00707 Translation initiation factor IF-3, C-terminal domain ABD1_05990 PF00043 Glutathione S-transferase, C-terminal domain ABD1_05990 PF02798 Glutathione S-transferase, N-terminal domain ABD1_06000 PF09335 SNARE associated Golgi protein ABD1_06010 PF07690 Major Facilitator Superfamily ABD1_06020 PF01632 Ribosomal protein L35 ABD1_06030 PF00453 Ribosomal protein L20 ABD1_06070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABD1_06070 PF01409 tRNA synthetases class II core domain (F) ABD1_06080 PF03484 tRNA synthetase B5 domain ABD1_06080 PF03147 Ferredoxin-fold anticodon binding domain ABD1_06080 PF03483 B3/4 domain ABD1_06080 PF01588 Putative tRNA binding domain ABD1_06080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABD1_06090 PF00216 Bacterial DNA-binding protein ABD1_06110 PF07498 Rho termination factor, N-terminal domain ABD1_06110 PF07497 Rho termination factor, RNA-binding domain ABD1_06110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABD1_06120 PF00085 Thioredoxin ABD1_06130 PF02541 Ppx/GppA phosphatase family ABD1_06140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABD1_06150 PF09179 TilS substrate binding domain ABD1_06150 PF11734 TilS substrate C-terminal domain ABD1_06150 PF01171 PP-loop family ABD1_06160 PF03807 NADP oxidoreductase coenzyme F420-dependent ABD1_06160 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABD1_06170 PF02325 YGGT family ABD1_06180 PF01612 3'-5' exonuclease ABD1_06180 PF01367 5'-3' exonuclease, C-terminal SAM fold ABD1_06180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABD1_06180 PF00476 DNA polymerase family A ABD1_06220 PF00437 Type II/IV secretion system protein ABD1_06230 PF02566 OsmC-like protein ABD1_06240 PF01047 MarR family ABD1_06260 PF00795 Carbon-nitrogen hydrolase ABD1_06300 PF04963 Sigma-54 factor, core binding domain ABD1_06300 PF04552 Sigma-54, DNA binding domain ABD1_06300 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABD1_06310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABD1_06320 PF01722 BolA-like protein ABD1_06330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABD1_06340 PF01634 ATP phosphoribosyltransferase ABD1_06350 PF00815 Histidinol dehydrogenase ABD1_06360 PF00155 Aminotransferase class I and II ABD1_06370 PF04715 Anthranilate synthase component I, N terminal region ABD1_06370 PF00425 chorismate binding enzyme ABD1_06460 PF00293 NUDIX domain ABD1_06470 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_06480 PF00814 Glycoprotease family ABD1_06490 PF04445 Putative SAM-dependent methyltransferase ABD1_06510 PF00756 Putative esterase ABD1_06530 PF00834 Ribulose-phosphate 3 epimerase family ABD1_06560 PF00394 Multicopper oxidase ABD1_06560 PF07731 Multicopper oxidase ABD1_06560 PF07732 Multicopper oxidase ABD1_06570 PF05275 Copper resistance protein B precursor (CopB) ABD1_06590 PF00893 Small Multidrug Resistance protein ABD1_06600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABD1_06600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABD1_06610 PF01960 ArgJ family ABD1_06620 PF02445 Quinolinate synthetase A protein ABD1_06630 PF00962 Adenosine/AMP deaminase ABD1_06640 PF00107 Zinc-binding dehydrogenase ABD1_06640 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_06650 PF03466 LysR substrate binding domain ABD1_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_06670 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_06680 PF07690 Major Facilitator Superfamily ABD1_06690 PF02515 CoA-transferase family III ABD1_06700 PF00440 Bacterial regulatory proteins, tetR family ABD1_06700 PF17932 Tetracyclin repressor-like, C-terminal domain ABD1_06730 PF14537 Cytochrome c3 ABD1_06730 PF00890 FAD binding domain ABD1_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_06740 PF03466 LysR substrate binding domain ABD1_06760 PF07690 Major Facilitator Superfamily ABD1_06770 PF03466 LysR substrate binding domain ABD1_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_06790 PF07687 Peptidase dimerisation domain ABD1_06790 PF01546 Peptidase family M20/M25/M40 ABD1_06800 PF12833 Helix-turn-helix domain ABD1_06800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABD1_06830 PF01717 Cobalamin-independent synthase, Catalytic domain ABD1_06830 PF08267 Cobalamin-independent synthase, N-terminal domain ABD1_06840 PF01613 Flavin reductase like domain ABD1_06920 PF17074 Darcynin, domain of unknown function ABD1_06940 PF02567 Phenazine biosynthesis-like protein ABD1_06970 PF00268 Ribonucleotide reductase, small chain ABD1_06990 PF02867 Ribonucleotide reductase, barrel domain ABD1_06990 PF03477 ATP cone domain ABD1_06990 PF00317 Ribonucleotide reductase, all-alpha domain ABD1_07000 PF00072 Response regulator receiver domain ABD1_07000 PF00486 Transcriptional regulatory protein, C terminal ABD1_07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_07010 PF00512 His Kinase A (phospho-acceptor) domain ABD1_07010 PF00672 HAMP domain ABD1_07030 PF00990 Diguanylate cyclase, GGDEF domain ABD1_07030 PF17151 Periplasmic sensor domain ABD1_07040 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABD1_07050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABD1_07060 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABD1_07060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABD1_07080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABD1_07080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABD1_07080 PF10531 SLBB domain ABD1_07090 PF00384 Molybdopterin oxidoreductase ABD1_07090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABD1_07090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABD1_07100 PF00146 NADH dehydrogenase ABD1_07110 PF12838 4Fe-4S dicluster domain ABD1_07120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABD1_07130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABD1_07140 PF00361 Proton-conducting membrane transporter ABD1_07140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABD1_07150 PF00361 Proton-conducting membrane transporter ABD1_07160 PF00361 Proton-conducting membrane transporter ABD1_07180 PF00313 'Cold-shock' DNA-binding domain ABD1_07200 PF03466 LysR substrate binding domain ABD1_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_07210 PF00175 Oxidoreductase NAD-binding domain ABD1_07210 PF00970 Oxidoreductase FAD-binding domain ABD1_07240 PF05552 Conserved TM helix ABD1_07270 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_07280 PF13533 Biotin-lipoyl like ABD1_07330 PF09334 tRNA synthetases class I (M) ABD1_07330 PF01588 Putative tRNA binding domain ABD1_07350 PF10609 NUBPL iron-transfer P-loop NTPase ABD1_07370 PF01048 Phosphorylase superfamily ABD1_07410 PF00692 dUTPase ABD1_07470 PF01207 Dihydrouridine synthase (Dus) ABD1_07490 PF02978 Signal peptide binding domain ABD1_07490 PF02881 SRP54-type protein, helical bundle domain ABD1_07490 PF00448 SRP54-type protein, GTPase domain ABD1_07500 PF03309 Type III pantothenate kinase ABD1_07520 PF01925 Sulfite exporter TauE/SafE ABD1_07540 PF06470 SMC proteins Flexible Hinge Domain ABD1_07540 PF02463 RecF/RecN/SMC N terminal domain ABD1_07560 PF03120 NAD-dependent DNA ligase OB-fold domain ABD1_07560 PF12826 Helix-hairpin-helix motif ABD1_07560 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABD1_07560 PF00533 BRCA1 C Terminus (BRCT) domain ABD1_07560 PF01653 NAD-dependent DNA ligase adenylation domain ABD1_07570 PF00210 Ferritin-like domain ABD1_07580 PF07690 Major Facilitator Superfamily ABD1_07590 PF00982 Glycosyltransferase family 20 ABD1_07600 PF02358 Trehalose-phosphatase ABD1_07610 PF08241 Methyltransferase domain ABD1_07610 PF12697 Alpha/beta hydrolase family ABD1_07620 PF06968 Biotin and Thiamin Synthesis associated domain ABD1_07620 PF00202 Aminotransferase class-III ABD1_07620 PF04055 Radical SAM superfamily ABD1_07630 PF00155 Aminotransferase class I and II ABD1_07660 PF01479 S4 domain ABD1_07660 PF00849 RNA pseudouridylate synthase ABD1_07670 PF04079 Segregation and condensation complex subunit ScpB ABD1_07680 PF02616 Segregation and condensation protein ScpA ABD1_07690 PF01300 Telomere recombination ABD1_07700 PF04315 Elongation factor P hydroxylase ABD1_07710 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABD1_07720 PF01783 Ribosomal L32p protein family ABD1_07730 PF00698 Acyl transferase domain ABD1_07750 PF00550 Phosphopantetheine attachment site ABD1_07760 PF04972 BON domain ABD1_07760 PF01476 LysM domain ABD1_07770 PF03070 TENA/THI-4/PQQC family ABD1_07770 PF08543 Phosphomethylpyrimidine kinase ABD1_07770 PF02581 Thiamine monophosphate synthase ABD1_07790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABD1_07820 PF02261 Aspartate decarboxylase ABD1_07830 PF01195 Peptidyl-tRNA hydrolase ABD1_07840 PF01386 Ribosomal L25p family ABD1_07850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABD1_07850 PF14572 Phosphoribosyl synthetase-associated domain ABD1_07860 PF03550 Outer membrane lipoprotein LolB ABD1_07880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABD1_07880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABD1_07880 PF01488 Shikimate / quinate 5-dehydrogenase ABD1_07890 PF08275 DNA primase catalytic core, N-terminal domain ABD1_07890 PF10410 DnaB-helicase binding domain of primase ABD1_07890 PF08278 DNA primase DnaG DnaB-binding ABD1_07890 PF01807 CHC2 zinc finger ABD1_07900 PF13525 Outer membrane lipoprotein ABD1_07910 PF00849 RNA pseudouridylate synthase ABD1_07910 PF01479 S4 domain ABD1_07930 PF03358 NADPH-dependent FMN reductase ABD1_07940 PF01668 SmpB protein ABD1_07950 PF01467 Cytidylyltransferase-like ABD1_07960 PF00037 4Fe-4S binding domain ABD1_07980 PF03466 LysR substrate binding domain ABD1_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_07990 PF00180 Isocitrate/isopropylmalate dehydrogenase ABD1_08000 PF02028 BCCT, betaine/carnitine/choline family transporter ABD1_08010 PF07859 alpha/beta hydrolase fold ABD1_08020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABD1_08020 PF00355 Rieske [2Fe-2S] domain ABD1_08030 PF00171 Aldehyde dehydrogenase family ABD1_08040 PF00970 Oxidoreductase FAD-binding domain ABD1_08040 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_08040 PF00175 Oxidoreductase NAD-binding domain ABD1_08060 PF00795 Carbon-nitrogen hydrolase ABD1_08060 PF02540 NAD synthase ABD1_08080 PF02678 Pirin ABD1_08080 PF05726 Pirin C-terminal cupin domain ABD1_08100 PF02801 Beta-ketoacyl synthase, C-terminal domain ABD1_08100 PF00109 Beta-ketoacyl synthase, N-terminal domain ABD1_08120 PF00164 Ribosomal protein S12/S23 ABD1_08130 PF00177 Ribosomal protein S7p/S5e ABD1_08140 PF00679 Elongation factor G C-terminus ABD1_08140 PF00009 Elongation factor Tu GTP binding domain ABD1_08140 PF03764 Elongation factor G, domain IV ABD1_08140 PF03144 Elongation factor Tu domain 2 ABD1_08140 PF14492 Elongation Factor G, domain II ABD1_08150 PF03144 Elongation factor Tu domain 2 ABD1_08150 PF03143 Elongation factor Tu C-terminal domain ABD1_08150 PF00009 Elongation factor Tu GTP binding domain ABD1_08180 PF00583 Acetyltransferase (GNAT) family ABD1_08190 PF04376 Arginine-tRNA-protein transferase, N terminus ABD1_08190 PF04377 Arginine-tRNA-protein transferase, C terminus ABD1_08200 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABD1_08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_08220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABD1_08220 PF17854 FtsK alpha domain ABD1_08220 PF09397 Ftsk gamma domain ABD1_08220 PF01580 FtsK/SpoIIIE family ABD1_08230 PF01810 LysE type translocator ABD1_08250 PF03776 Septum formation topological specificity factor MinE ABD1_08260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABD1_08270 PF03775 Septum formation inhibitor MinC, C-terminal domain ABD1_08290 PF01553 Acyltransferase ABD1_08300 PF00691 OmpA family ABD1_08300 PF13488 Glycine zipper ABD1_08310 PF13361 UvrD-like helicase C-terminal domain ABD1_08310 PF00580 UvrD/REP helicase N-terminal domain ABD1_08320 PF00692 dUTPase ABD1_08330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABD1_08330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABD1_08330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABD1_08330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABD1_08340 PF00696 Amino acid kinase family ABD1_08360 PF13230 Glutamine amidotransferases class-II ABD1_08370 PF01814 Hemerythrin HHE cation binding domain ABD1_08390 PF03658 RnfH family Ubiquitin ABD1_08400 PF04355 SmpA / OmlA family ABD1_08410 PF01475 Ferric uptake regulator family ABD1_08420 PF00437 Type II/IV secretion system protein ABD1_08430 PF00437 Type II/IV secretion system protein ABD1_08440 PF01168 Alanine racemase, N-terminal domain ABD1_08460 PF00149 Calcineurin-like phosphoesterase ABD1_08460 PF12320 Type 5 capsule protein repressor C-terminal domain ABD1_08500 PF08338 Domain of unknown function (DUF1731) ABD1_08500 PF01370 NAD dependent epimerase/dehydratase family ABD1_08510 PF01266 FAD dependent oxidoreductase ABD1_08520 PF00490 Delta-aminolevulinic acid dehydratase ABD1_08530 PF03061 Thioesterase superfamily ABD1_08540 PF13533 Biotin-lipoyl like ABD1_08550 PF07690 Major Facilitator Superfamily ABD1_08570 PF00589 Phage integrase family ABD1_08570 PF13356 Arm DNA-binding domain ABD1_08670 PF00083 Sugar (and other) transporter ABD1_08680 PF00701 Dihydrodipicolinate synthetase family ABD1_08750 PF13520 Amino acid permease ABD1_08760 PF02574 Homocysteine S-methyltransferase ABD1_08780 PF06039 Malate:quinone oxidoreductase (Mqo) ABD1_08790 PF00732 GMC oxidoreductase ABD1_08790 PF05199 GMC oxidoreductase ABD1_08800 PF00171 Aldehyde dehydrogenase family ABD1_08810 PF13977 BetI-type transcriptional repressor, C-terminal ABD1_08810 PF00440 Bacterial regulatory proteins, tetR family ABD1_08820 PF02028 BCCT, betaine/carnitine/choline family transporter ABD1_08830 PF02028 BCCT, betaine/carnitine/choline family transporter ABD1_08850 PF03061 Thioesterase superfamily ABD1_08870 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABD1_08870 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABD1_08880 PF00375 Sodium:dicarboxylate symporter family ABD1_08890 PF07152 YaeQ protein ABD1_08900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_08910 PF01522 Polysaccharide deacetylase ABD1_08910 PF14883 Hypothetical glycosyl hydrolase family 13 ABD1_08920 PF00535 Glycosyl transferase family 2 ABD1_08940 PF00378 Enoyl-CoA hydratase/isomerase ABD1_08970 PF09339 IclR helix-turn-helix domain ABD1_08970 PF01614 Bacterial transcriptional regulator ABD1_08980 PF00355 Rieske [2Fe-2S] domain ABD1_09000 PF00355 Rieske [2Fe-2S] domain ABD1_09020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABD1_09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_09030 PF14759 Reductase C-terminal ABD1_09040 PF07690 Major Facilitator Superfamily ABD1_09060 PF12697 Alpha/beta hydrolase family ABD1_09080 PF01958 Domain of unknown function DUF108 ABD1_09080 PF03447 Homoserine dehydrogenase, NAD binding domain ABD1_09090 PF00171 Aldehyde dehydrogenase family ABD1_09100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABD1_09100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABD1_09100 PF00205 Thiamine pyrophosphate enzyme, central domain ABD1_09120 PF07690 Major Facilitator Superfamily ABD1_09140 PF01327 Polypeptide deformylase ABD1_09150 PF04960 Glutaminase ABD1_09160 PF12833 Helix-turn-helix domain ABD1_09160 PF02311 AraC-like ligand binding domain ABD1_09170 PF07690 Major Facilitator Superfamily ABD1_09180 PF01263 Aldose 1-epimerase ABD1_09200 PF03466 LysR substrate binding domain ABD1_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_09220 PF07690 Major Facilitator Superfamily ABD1_09230 PF00456 Transketolase, thiamine diphosphate binding domain ABD1_09240 PF02780 Transketolase, C-terminal domain ABD1_09240 PF02779 Transketolase, pyrimidine binding domain ABD1_09250 PF02310 B12 binding domain ABD1_09250 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABD1_09250 PF00809 Pterin binding enzyme ABD1_09250 PF02574 Homocysteine S-methyltransferase ABD1_09250 PF02607 B12 binding domain ABD1_09260 PF01384 Phosphate transporter family ABD1_09270 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_09300 PF03781 Sulfatase-modifying factor enzyme 1 ABD1_09310 PF00884 Sulfatase ABD1_09330 PF01521 Iron-sulphur cluster biosynthesis ABD1_09330 PF01106 NifU-like domain ABD1_09340 PF00593 TonB dependent receptor ABD1_09340 PF07715 TonB-dependent Receptor Plug Domain ABD1_09360 PF00561 alpha/beta hydrolase fold ABD1_09370 PF00484 Carbonic anhydrase ABD1_09380 PF13472 GDSL-like Lipase/Acylhydrolase family ABD1_09390 PF00005 ABC transporter ABD1_09410 PF01694 Rhomboid family ABD1_09420 PF00912 Transglycosylase ABD1_09430 PF13090 Polyphosphate kinase C-terminal domain 2 ABD1_09430 PF13089 Polyphosphate kinase N-terminal domain ABD1_09430 PF17941 Polyphosphate kinase C-terminal domain 1 ABD1_09430 PF02503 Polyphosphate kinase middle domain ABD1_09450 PF03466 LysR substrate binding domain ABD1_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_09460 PF00561 alpha/beta hydrolase fold ABD1_09470 PF18113 Rubredoxin binding C-terminal domain ABD1_09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_09480 PF00301 Rubredoxin ABD1_09510 PF01336 OB-fold nucleic acid binding domain ABD1_09510 PF00152 tRNA synthetases class II (D, K and N) ABD1_09520 PF14052 Capsule assembly protein Wzi ABD1_09540 PF01507 Phosphoadenosine phosphosulfate reductase family ABD1_09550 PF00009 Elongation factor Tu GTP binding domain ABD1_09590 PF03600 Citrate transporter ABD1_09600 PF01595 Cyclin M transmembrane N-terminal domain ABD1_09600 PF03471 Transporter associated domain ABD1_09600 PF00571 CBS domain ABD1_09610 PF03466 LysR substrate binding domain ABD1_09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_09620 PF00463 Isocitrate lyase family ABD1_09660 PF01774 UreD urease accessory protein ABD1_09670 PF00547 Urease, gamma subunit ABD1_09680 PF00699 Urease beta subunit ABD1_09690 PF00449 Urease alpha-subunit, N-terminal domain ABD1_09690 PF01979 Amidohydrolase family ABD1_09700 PF05194 UreE urease accessory protein, C-terminal domain ABD1_09700 PF02814 UreE urease accessory protein, N-terminal domain ABD1_09710 PF01730 UreF ABD1_09720 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABD1_09750 PF03717 Penicillin-binding Protein dimerisation domain ABD1_09750 PF00905 Penicillin binding protein transpeptidase domain ABD1_09780 PF05191 Adenylate kinase, active site lid ABD1_09800 PF10576 Iron-sulfur binding domain of endonuclease III ABD1_09800 PF00633 Helix-hairpin-helix motif ABD1_09800 PF00730 HhH-GPD superfamily base excision DNA repair protein ABD1_09810 PF04060 Putative Fe-S cluster ABD1_09820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_09820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABD1_09840 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABD1_09850 PF02590 Predicted SPOUT methyltransferase ABD1_09860 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABD1_09860 PF05362 Lon protease (S16) C-terminal proteolytic domain ABD1_09860 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_09870 PF03895 YadA-like membrane anchor domain ABD1_09870 PF05658 Head domain of trimeric autotransporter adhesin ABD1_09870 PF13018 Extended Signal Peptide of Type V secretion system ABD1_09870 PF05662 Coiled stalk of trimeric autotransporter adhesin ABD1_09880 PF05662 Coiled stalk of trimeric autotransporter adhesin ABD1_09880 PF03895 YadA-like membrane anchor domain ABD1_09880 PF05658 Head domain of trimeric autotransporter adhesin ABD1_09880 PF13018 Extended Signal Peptide of Type V secretion system ABD1_09900 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABD1_10060 PF00145 C-5 cytosine-specific DNA methylase ABD1_10510 PF08019 Phosphoethanolamine transferase EptA/EptB ABD1_10510 PF00884 Sulfatase ABD1_10570 PF00557 Metallopeptidase family M24 ABD1_10570 PF05195 Aminopeptidase P, N-terminal domain ABD1_10580 PF01494 FAD binding domain ABD1_10590 PF01494 FAD binding domain ABD1_10620 PF13411 MerR HTH family regulatory protein ABD1_10640 PF01810 LysE type translocator ABD1_10650 PF03466 LysR substrate binding domain ABD1_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_10670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABD1_10680 PF02021 Uncharacterised protein family UPF0102 ABD1_10690 PF04972 BON domain ABD1_10710 PF00293 NUDIX domain ABD1_10710 PF09297 NADH pyrophosphatase zinc ribbon domain ABD1_10730 PF00929 Exonuclease ABD1_10740 PF01464 Transglycosylase SLT domain ABD1_10740 PF01464 Transglycosylase SLT domain ABD1_10740 PF01476 LysM domain ABD1_10740 PF01476 LysM domain ABD1_10750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABD1_10760 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_10770 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_10770 PF12911 N-terminal TM domain of oligopeptide transport permease C ABD1_10780 PF00005 ABC transporter ABD1_10780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABD1_10790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_10790 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_10800 PF00593 TonB dependent receptor ABD1_10800 PF07715 TonB-dependent Receptor Plug Domain ABD1_10810 PF00929 Exonuclease ABD1_10820 PF01979 Amidohydrolase family ABD1_10830 PF00990 Diguanylate cyclase, GGDEF domain ABD1_10830 PF01590 GAF domain ABD1_10830 PF00563 EAL domain ABD1_10830 PF00360 Phytochrome region ABD1_10840 PF00764 Arginosuccinate synthase ABD1_10850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_10860 PF03180 NLPA lipoprotein ABD1_10910 PF03783 Curli production assembly/transport component CsgG ABD1_10930 PF05643 Putative bacterial lipoprotein (DUF799) ABD1_10950 PF00324 Amino acid permease ABD1_10960 PF01266 FAD dependent oxidoreductase ABD1_10970 PF00324 Amino acid permease ABD1_11000 PF00392 Bacterial regulatory proteins, gntR family ABD1_11000 PF07729 FCD domain ABD1_11020 PF00171 Aldehyde dehydrogenase family ABD1_11040 PF00202 Aminotransferase class-III ABD1_11050 PF04958 Arginine N-succinyltransferase beta subunit ABD1_11060 PF00324 Amino acid permease ABD1_11070 PF02678 Pirin ABD1_11070 PF17954 Quercetinase C-terminal cupin domain ABD1_11090 PF00106 short chain dehydrogenase ABD1_11100 PF00743 Flavin-binding monooxygenase-like ABD1_11120 PF00860 Permease family ABD1_11130 PF00962 Adenosine/AMP deaminase ABD1_11140 PF01292 Prokaryotic cytochrome b561 ABD1_11160 PF01351 Ribonuclease HII ABD1_11170 PF02599 Global regulator protein family ABD1_11180 PF13840 ACT domain ABD1_11180 PF01842 ACT domain ABD1_11180 PF00696 Amino acid kinase family ABD1_11690 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ABD1_11830 PF13438 Domain of unknown function (DUF4113) ABD1_11830 PF00817 impB/mucB/samB family ABD1_11830 PF11799 impB/mucB/samB family C-terminal domain ABD1_11840 PF00717 Peptidase S24-like ABD1_11850 PF13356 Arm DNA-binding domain ABD1_11850 PF00589 Phage integrase family ABD1_11860 PF02272 DHHA1 domain ABD1_11860 PF01411 tRNA synthetases class II (A) ABD1_11860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABD1_11870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABD1_11870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABD1_11880 PF13393 Histidyl-tRNA synthetase ABD1_11890 PF00709 Adenylosuccinate synthetase ABD1_11910 PF00248 Aldo/keto reductase family ABD1_11920 PF00027 Cyclic nucleotide-binding domain ABD1_11920 PF13545 Crp-like helix-turn-helix domain ABD1_11940 PF02566 OsmC-like protein ABD1_11970 PF10431 C-terminal, D2-small domain, of ClpB protein ABD1_11970 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_11970 PF07724 AAA domain (Cdc48 subfamily) ABD1_11970 PF17871 AAA lid domain ABD1_11970 PF02861 Clp amino terminal domain, pathogenicity island component ABD1_12000 PF02926 THUMP domain ABD1_12000 PF01170 Putative RNA methylase family UPF0020 ABD1_12000 PF10672 S-adenosylmethionine-dependent methyltransferase ABD1_12020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABD1_12020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABD1_12030 PF01979 Amidohydrolase family ABD1_12040 PF13488 Glycine zipper ABD1_12040 PF00691 OmpA family ABD1_12060 PF00043 Glutathione S-transferase, C-terminal domain ABD1_12060 PF13417 Glutathione S-transferase, N-terminal domain ABD1_12070 PF02390 Putative methyltransferase ABD1_12090 PF00043 Glutathione S-transferase, C-terminal domain ABD1_12090 PF02798 Glutathione S-transferase, N-terminal domain ABD1_12110 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_12110 PF13192 Thioredoxin domain ABD1_12150 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABD1_12150 PF00578 AhpC/TSA family ABD1_12160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABD1_12160 PF00271 Helicase conserved C-terminal domain ABD1_12160 PF00270 DEAD/DEAH box helicase ABD1_12160 PF11898 Domain of unknown function (DUF3418) ABD1_12160 PF04408 Helicase associated domain (HA2) ABD1_12170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABD1_12170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABD1_12190 PF07690 Major Facilitator Superfamily ABD1_12200 PF03594 Benzoate membrane transport protein ABD1_12210 PF00106 short chain dehydrogenase ABD1_12220 PF00970 Oxidoreductase FAD-binding domain ABD1_12220 PF00175 Oxidoreductase NAD-binding domain ABD1_12220 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_12230 PF00866 Ring hydroxylating beta subunit ABD1_12240 PF00355 Rieske [2Fe-2S] domain ABD1_12240 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABD1_12250 PF03466 LysR substrate binding domain ABD1_12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_12270 PF00403 Heavy-metal-associated domain ABD1_12280 PF09278 MerR, DNA binding ABD1_12280 PF00376 MerR family regulatory protein ABD1_12350 PF13742 OB-fold nucleic acid binding domain ABD1_12350 PF02601 Exonuclease VII, large subunit ABD1_12400 PF01810 LysE type translocator ABD1_12410 PF00313 'Cold-shock' DNA-binding domain ABD1_12430 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABD1_12430 PF03807 NADP oxidoreductase coenzyme F420-dependent ABD1_12480 PF07690 Major Facilitator Superfamily ABD1_12490 PF01638 HxlR-like helix-turn-helix ABD1_12540 PF00145 C-5 cytosine-specific DNA methylase ABD1_12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_12550 PF13426 PAS domain ABD1_12550 PF13188 PAS domain ABD1_12570 PF03852 DNA mismatch endonuclease Vsr ABD1_12580 PF01406 tRNA synthetases class I (C) catalytic domain ABD1_12580 PF09190 DALR domain ABD1_12590 PF01380 SIS domain ABD1_12590 PF00571 CBS domain ABD1_12620 PF03968 OstA-like protein ABD1_12630 PF00005 ABC transporter ABD1_12630 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABD1_12640 PF02321 Outer membrane efflux protein ABD1_12650 PF00664 ABC transporter transmembrane region ABD1_12650 PF00005 ABC transporter ABD1_12650 PF03412 Peptidase C39 family ABD1_12670 PF01205 Uncharacterized protein family UPF0029 ABD1_12680 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_12700 PF01596 O-methyltransferase ABD1_12720 PF00037 4Fe-4S binding domain ABD1_12720 PF11953 Domain of unknown function (DUF3470) ABD1_12740 PF01624 MutS domain I ABD1_12740 PF05190 MutS family domain IV ABD1_12740 PF00488 MutS domain V ABD1_12740 PF05192 MutS domain III ABD1_12740 PF05188 MutS domain II ABD1_12750 PF01037 Lrp/AsnC ligand binding domain ABD1_12760 PF00892 EamA-like transporter family ABD1_12770 PF00563 EAL domain ABD1_12770 PF00990 Diguanylate cyclase, GGDEF domain ABD1_12770 PF03707 Bacterial signalling protein N terminal repeat ABD1_12780 PF03279 Bacterial lipid A biosynthesis acyltransferase ABD1_12800 PF07690 Major Facilitator Superfamily ABD1_12840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABD1_12840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABD1_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_12900 PF03466 LysR substrate binding domain ABD1_12910 PF01566 Natural resistance-associated macrophage protein ABD1_12920 PF03746 LamB/YcsF family ABD1_12930 PF07286 Protein of unknown function (DUF1445) ABD1_12950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_12950 PF02785 Biotin carboxylase C-terminal domain ABD1_12950 PF00364 Biotin-requiring enzyme ABD1_12950 PF00289 Biotin carboxylase, N-terminal domain ABD1_12960 PF00654 Voltage gated chloride channel ABD1_13000 PF00440 Bacterial regulatory proteins, tetR family ABD1_13020 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_13020 PF00107 Zinc-binding dehydrogenase ABD1_13020 PF13823 Alcohol dehydrogenase GroES-associated ABD1_13050 PF02785 Biotin carboxylase C-terminal domain ABD1_13050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_13050 PF00289 Biotin carboxylase, N-terminal domain ABD1_13060 PF02525 Flavodoxin-like fold ABD1_13070 PF01638 HxlR-like helix-turn-helix ABD1_13100 PF01402 Ribbon-helix-helix protein, copG family ABD1_13100 PF08753 NikR C terminal nickel binding domain ABD1_13110 PF01425 Amidase ABD1_13120 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABD1_13130 PF00005 ABC transporter ABD1_13250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABD1_13260 PF07690 Major Facilitator Superfamily ABD1_13290 PF02677 Epoxyqueuosine reductase QueH ABD1_13300 PF09278 MerR, DNA binding ABD1_13300 PF00376 MerR family regulatory protein ABD1_13320 PF00701 Dihydrodipicolinate synthetase family ABD1_13340 PF00392 Bacterial regulatory proteins, gntR family ABD1_13350 PF05544 Proline racemase ABD1_13360 PF01266 FAD dependent oxidoreductase ABD1_13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_13380 PF04324 BFD-like [2Fe-2S] binding domain ABD1_13400 PF00083 Sugar (and other) transporter ABD1_13410 PF00171 Aldehyde dehydrogenase family ABD1_13420 PF13520 Amino acid permease ABD1_13430 PF03315 Serine dehydratase beta chain ABD1_13430 PF03313 Serine dehydratase alpha chain ABD1_13440 PF00171 Aldehyde dehydrogenase family ABD1_13440 PF01575 MaoC like domain ABD1_13450 PF05138 Phenylacetic acid catabolic protein ABD1_13460 PF06243 Phenylacetic acid degradation B ABD1_13470 PF05138 Phenylacetic acid catabolic protein ABD1_13480 PF01883 Iron-sulfur cluster assembly protein ABD1_13490 PF00970 Oxidoreductase FAD-binding domain ABD1_13490 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_13490 PF00175 Oxidoreductase NAD-binding domain ABD1_13500 PF00378 Enoyl-CoA hydratase/isomerase ABD1_13510 PF00378 Enoyl-CoA hydratase/isomerase ABD1_13520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABD1_13520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABD1_13520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABD1_13530 PF00108 Thiolase, N-terminal domain ABD1_13530 PF02803 Thiolase, C-terminal domain ABD1_13540 PF00501 AMP-binding enzyme ABD1_13540 PF14535 AMP-binding enzyme C-terminal domain ABD1_13550 PF07848 PaaX-like protein ABD1_13550 PF08223 PaaX-like protein C-terminal domain ABD1_13560 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_13570 PF03061 Thioesterase superfamily ABD1_13620 PF00300 Histidine phosphatase superfamily (branch 1) ABD1_13680 PF03466 LysR substrate binding domain ABD1_13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_13690 PF00682 HMGL-like ABD1_13700 PF00289 Biotin carboxylase, N-terminal domain ABD1_13700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_13700 PF02785 Biotin carboxylase C-terminal domain ABD1_13700 PF00364 Biotin-requiring enzyme ABD1_13710 PF00378 Enoyl-CoA hydratase/isomerase ABD1_13720 PF01039 Carboxyl transferase domain ABD1_13730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_13730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_13730 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_13740 PF00440 Bacterial regulatory proteins, tetR family ABD1_13750 PF00501 AMP-binding enzyme ABD1_13750 PF13193 AMP-binding enzyme C-terminal domain ABD1_13790 PF03466 LysR substrate binding domain ABD1_13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_13850 PF18146 Damage-inducible protein CinA KH domain ABD1_13850 PF02464 Competence-damaged protein ABD1_13850 PF00994 Probable molybdopterin binding domain ABD1_13870 PF18011 C-terminal domain found in long catalases ABD1_13870 PF00199 Catalase ABD1_13870 PF06628 Catalase-related immune-responsive ABD1_13910 PF00717 Peptidase S24-like ABD1_13930 PF01037 Lrp/AsnC ligand binding domain ABD1_13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_13950 PF00512 His Kinase A (phospho-acceptor) domain ABD1_13950 PF09308 LuxQ, periplasmic ABD1_13950 PF00072 Response regulator receiver domain ABD1_13960 PF00072 Response regulator receiver domain ABD1_13990 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14000 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14010 PF00005 ABC transporter ABD1_14020 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABD1_14030 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABD1_14050 PF03466 LysR substrate binding domain ABD1_14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14060 PF01810 LysE type translocator ABD1_14070 PF00266 Aminotransferase class-V ABD1_14090 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_14100 PF00581 Rhodanese-like domain ABD1_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14120 PF03466 LysR substrate binding domain ABD1_14130 PF02798 Glutathione S-transferase, N-terminal domain ABD1_14140 PF02798 Glutathione S-transferase, N-terminal domain ABD1_14140 PF14834 Glutathione S-transferase, C-terminal domain ABD1_14150 PF03466 LysR substrate binding domain ABD1_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14160 PF03788 LrgA family ABD1_14170 PF04172 LrgB-like family ABD1_14180 PF00155 Aminotransferase class I and II ABD1_14180 PF00392 Bacterial regulatory proteins, gntR family ABD1_14210 PF07690 Major Facilitator Superfamily ABD1_14220 PF16957 Malonate decarboxylase, alpha subunit, transporter ABD1_14230 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABD1_14240 PF06857 Malonate decarboxylase delta subunit (MdcD) ABD1_14250 PF01039 Carboxyl transferase domain ABD1_14270 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABD1_14280 PF00698 Acyl transferase domain ABD1_14310 PF03466 LysR substrate binding domain ABD1_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14320 PF00392 Bacterial regulatory proteins, gntR family ABD1_14320 PF00155 Aminotransferase class I and II ABD1_14340 PF02322 Cytochrome bd terminal oxidase subunit II ABD1_14350 PF01654 Cytochrome bd terminal oxidase subunit I ABD1_14390 PF00296 Luciferase-like monooxygenase ABD1_14420 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABD1_14430 PF00005 ABC transporter ABD1_14440 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABD1_14460 PF01177 Asp/Glu/Hydantoin racemase ABD1_14470 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABD1_14490 PF03466 LysR substrate binding domain ABD1_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14510 PF01979 Amidohydrolase family ABD1_14510 PF13382 Adenine deaminase C-terminal domain ABD1_14530 PF03960 ArsC family ABD1_14540 PF01022 Bacterial regulatory protein, arsR family ABD1_14550 PF01758 Sodium Bile acid symporter family ABD1_14560 PF03466 LysR substrate binding domain ABD1_14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_14580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_14580 PF13192 Thioredoxin domain ABD1_14610 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_14620 PF00588 SpoU rRNA Methylase family ABD1_14630 PF01336 OB-fold nucleic acid binding domain ABD1_14630 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABD1_14630 PF02811 PHP domain ABD1_14630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABD1_14630 PF14579 Helix-hairpin-helix motif ABD1_14640 PF00710 Asparaginase, N-terminal ABD1_14640 PF17763 Glutaminase/Asparaginase C-terminal domain ABD1_14650 PF00375 Sodium:dicarboxylate symporter family ABD1_14660 PF00155 Aminotransferase class I and II ABD1_14670 PF01641 SelR domain ABD1_14680 PF00255 Glutathione peroxidase ABD1_14690 PF12852 Cupin ABD1_14690 PF12833 Helix-turn-helix domain ABD1_14710 PF00155 Aminotransferase class I and II ABD1_14720 PF08335 GlnD PII-uridylyltransferase ABD1_14720 PF01909 Nucleotidyltransferase domain ABD1_14720 PF01966 HD domain ABD1_14730 PF02222 ATP-grasp domain ABD1_14750 PF05437 Branched-chain amino acid transport protein (AzlD) ABD1_14760 PF03591 AzlC protein ABD1_14810 PF06071 Protein of unknown function (DUF933) ABD1_14810 PF01926 50S ribosome-binding GTPase ABD1_14820 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14830 PF09383 NIL domain ABD1_14830 PF00005 ABC transporter ABD1_14840 PF03180 NLPA lipoprotein ABD1_14850 PF03180 NLPA lipoprotein ABD1_14860 PF00296 Luciferase-like monooxygenase ABD1_14880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_14880 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABD1_14910 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14920 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_14930 PF00005 ABC transporter ABD1_14950 PF01037 Lrp/AsnC ligand binding domain ABD1_14960 PF01709 Transcriptional regulator ABD1_14980 PF00440 Bacterial regulatory proteins, tetR family ABD1_15010 PF03466 LysR substrate binding domain ABD1_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_15030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABD1_15050 PF00892 EamA-like transporter family ABD1_15080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABD1_15080 PF12833 Helix-turn-helix domain ABD1_15110 PF13953 PapC C-terminal domain ABD1_15110 PF13954 PapC N-terminal domain ABD1_15110 PF00577 Outer membrane usher protein ABD1_15120 PF02753 Pili assembly chaperone PapD, C-terminal domain ABD1_15120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABD1_15130 PF16970 Type-1 fimbrial protein, A ABD1_15160 PF04055 Radical SAM superfamily ABD1_15160 PF06968 Biotin and Thiamin Synthesis associated domain ABD1_15170 PF08331 Domain of unknown function (DUF1730) ABD1_15180 PF01256 Carbohydrate kinase ABD1_15180 PF03853 YjeF-related protein N-terminus ABD1_15190 PF02075 Crossover junction endodeoxyribonuclease RuvC ABD1_15230 PF00905 Penicillin binding protein transpeptidase domain ABD1_15270 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABD1_15270 PF02772 S-adenosylmethionine synthetase, central domain ABD1_15270 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABD1_15290 PF02779 Transketolase, pyrimidine binding domain ABD1_15290 PF02780 Transketolase, C-terminal domain ABD1_15290 PF00456 Transketolase, thiamine diphosphate binding domain ABD1_15310 PF04264 YceI-like domain ABD1_15330 PF09992 Phosphodiester glycosidase ABD1_15350 PF05958 tRNA (Uracil-5-)-methyltransferase ABD1_15360 PF00171 Aldehyde dehydrogenase family ABD1_15360 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABD1_15360 PF01619 Proline dehydrogenase ABD1_15360 PF14850 DNA-binding domain of Proline dehydrogenase ABD1_15370 PF01037 Lrp/AsnC ligand binding domain ABD1_15380 PF00474 Sodium:solute symporter family ABD1_15390 PF02146 Sir2 family ABD1_15400 PF01597 Glycine cleavage H-protein ABD1_15410 PF12833 Helix-turn-helix domain ABD1_15410 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABD1_15430 PF00664 ABC transporter transmembrane region ABD1_15430 PF00005 ABC transporter ABD1_15440 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABD1_15450 PF06912 Protein of unknown function (DUF1275) ABD1_15460 PF00375 Sodium:dicarboxylate symporter family ABD1_15490 PF08007 Cupin superfamily protein ABD1_15500 PF02545 Maf-like protein ABD1_15520 PF00162 Phosphoglycerate kinase ABD1_15540 PF01116 Fructose-bisphosphate aldolase class-II ABD1_15550 PF00639 PPIC-type PPIASE domain ABD1_15550 PF09312 SurA N-terminal domain ABD1_15560 PF03968 OstA-like protein ABD1_15560 PF04453 LPS transport system D ABD1_15570 PF01636 Phosphotransferase enzyme family ABD1_15580 PF00483 Nucleotidyl transferase ABD1_15590 PF02527 rRNA small subunit methyltransferase G ABD1_15600 PF13614 AAA domain ABD1_15610 PF17762 HTH domain found in ParB protein ABD1_15610 PF02195 ParB-like nuclease domain ABD1_15620 PF01618 MotA/TolQ/ExbB proton channel family ABD1_15640 PF00005 ABC transporter ABD1_15640 PF00664 ABC transporter transmembrane region ABD1_15650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABD1_15660 PF02348 Cytidylyltransferase ABD1_15670 PF09115 DNA polymerase III, delta subunit, C terminal ABD1_15690 PF01026 TatD related DNase ABD1_15720 PF02501 Type II secretion system (T2SS), protein I ABD1_15720 PF07963 Prokaryotic N-terminal methylation motif ABD1_15730 PF11612 Type II secretion system (T2SS), protein J ABD1_15730 PF07963 Prokaryotic N-terminal methylation motif ABD1_15740 PF03934 Type II secretion system (T2SS), protein K ABD1_15760 PF03167 Uracil DNA glycosylase superfamily ABD1_15780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABD1_15800 PF02224 Cytidylate kinase ABD1_15810 PF00575 S1 RNA binding domain ABD1_15820 PF00216 Bacterial DNA-binding protein ABD1_15840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABD1_15860 PF00743 Flavin-binding monooxygenase-like ABD1_15880 PF03969 AFG1-like ATPase ABD1_15890 PF01274 Malate synthase ABD1_15900 PF02472 Biopolymer transport protein ExbD/TolR ABD1_15910 PF02472 Biopolymer transport protein ExbD/TolR ABD1_15920 PF01618 MotA/TolQ/ExbB proton channel family ABD1_15940 PF07715 TonB-dependent Receptor Plug Domain ABD1_15940 PF00593 TonB dependent receptor ABD1_15970 PF01432 Peptidase family M3 ABD1_15980 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_15990 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_16000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABD1_16000 PF00005 ABC transporter ABD1_16030 PF00459 Inositol monophosphatase family ABD1_16050 PF01649 Ribosomal protein S20 ABD1_16060 PF13460 NAD(P)H-binding ABD1_16070 PF03737 Aldolase/RraA ABD1_16110 PF17757 UvrB interaction domain ABD1_16110 PF03461 TRCF domain ABD1_16110 PF00271 Helicase conserved C-terminal domain ABD1_16110 PF00270 DEAD/DEAH box helicase ABD1_16110 PF02559 CarD-like/TRCF domain ABD1_16130 PF00211 Adenylate and Guanylate cyclase catalytic domain ABD1_16140 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_16150 PF00012 Hsp70 protein ABD1_16160 PF00226 DnaJ domain ABD1_16160 PF07743 HSCB C-terminal oligomerisation domain ABD1_16170 PF01521 Iron-sulphur cluster biosynthesis ABD1_16180 PF01592 NifU-like N terminal domain ABD1_16190 PF00266 Aminotransferase class-V ABD1_16200 PF02082 Transcriptional regulator ABD1_16230 PF00216 Bacterial DNA-binding protein ABD1_16240 PF00639 PPIC-type PPIASE domain ABD1_16240 PF09312 SurA N-terminal domain ABD1_16250 PF12852 Cupin ABD1_16250 PF12833 Helix-turn-helix domain ABD1_16260 PF00487 Fatty acid desaturase ABD1_16270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_16270 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_16270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_16280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_16280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_16280 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_16290 PF03109 ABC1 family ABD1_16310 PF04073 Aminoacyl-tRNA editing domain ABD1_16320 PF06276 Ferric iron reductase FhuF-like transporter ABD1_16320 PF04183 IucA / IucC family ABD1_16330 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABD1_16340 PF07690 Major Facilitator Superfamily ABD1_16350 PF04183 IucA / IucC family ABD1_16350 PF06276 Ferric iron reductase FhuF-like transporter ABD1_16360 PF06276 Ferric iron reductase FhuF-like transporter ABD1_16360 PF04183 IucA / IucC family ABD1_16380 PF03737 Aldolase/RraA ABD1_16390 PF00593 TonB dependent receptor ABD1_16390 PF07715 TonB-dependent Receptor Plug Domain ABD1_16450 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABD1_16460 PF02277 Phosphoribosyltransferase ABD1_16490 PF02654 Cobalamin-5-phosphate synthase ABD1_16500 PF00793 DAHP synthetase I family ABD1_16510 PF01925 Sulfite exporter TauE/SafE ABD1_16540 PF07715 TonB-dependent Receptor Plug Domain ABD1_16540 PF00593 TonB dependent receptor ABD1_16550 PF02684 Lipid-A-disaccharide synthetase ABD1_16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_16580 PF00005 ABC transporter ABD1_16650 PF01230 HIT domain ABD1_16710 PF08241 Methyltransferase domain ABD1_16720 PF00561 alpha/beta hydrolase fold ABD1_16730 PF01053 Cys/Met metabolism PLP-dependent enzyme ABD1_16750 PF02575 YbaB/EbfC DNA-binding family ABD1_16760 PF02132 RecR protein ABD1_16760 PF13662 Toprim domain ABD1_16770 PF01612 3'-5' exonuclease ABD1_16770 PF00570 HRDC domain ABD1_16810 PF05166 YcgL domain ABD1_16830 PF01434 Peptidase family M41 ABD1_16830 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_16830 PF17862 AAA+ lid domain ABD1_16850 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_16860 PF05175 Methyltransferase small domain ABD1_16870 PF01264 Chorismate synthase ABD1_16880 PF08448 PAS fold ABD1_16880 PF00990 Diguanylate cyclase, GGDEF domain ABD1_16910 PF04055 Radical SAM superfamily ABD1_16920 PF00676 Dehydrogenase E1 component ABD1_16930 PF02780 Transketolase, C-terminal domain ABD1_16930 PF02779 Transketolase, pyrimidine binding domain ABD1_16940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABD1_16940 PF00364 Biotin-requiring enzyme ABD1_16940 PF02817 e3 binding domain ABD1_16950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABD1_16950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_16960 PF00106 short chain dehydrogenase ABD1_16970 PF00107 Zinc-binding dehydrogenase ABD1_16970 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_16980 PF01062 Bestrophin, RFP-TM, chloride channel ABD1_16990 PF00158 Sigma-54 interaction domain ABD1_16990 PF02954 Bacterial regulatory protein, Fis family ABD1_16990 PF00072 Response regulator receiver domain ABD1_17000 PF00753 Metallo-beta-lactamase superfamily ABD1_17000 PF04273 Putative phosphatase (DUF442) ABD1_17010 PF00753 Metallo-beta-lactamase superfamily ABD1_17010 PF04273 Putative phosphatase (DUF442) ABD1_17020 PF01925 Sulfite exporter TauE/SafE ABD1_17050 PF06445 GyrI-like small molecule binding domain ABD1_17050 PF12833 Helix-turn-helix domain ABD1_17060 PF01638 HxlR-like helix-turn-helix ABD1_17070 PF02525 Flavodoxin-like fold ABD1_17080 PF02417 Chromate transporter ABD1_17120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABD1_17130 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_17140 PF00005 ABC transporter ABD1_17170 PF00083 Sugar (and other) transporter ABD1_17180 PF07715 TonB-dependent Receptor Plug Domain ABD1_17180 PF00593 TonB dependent receptor ABD1_17190 PF00206 Lyase ABD1_17190 PF10415 Fumarase C C-terminus ABD1_17220 PF03466 LysR substrate binding domain ABD1_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_17230 PF03466 LysR substrate binding domain ABD1_17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_17240 PF00108 Thiolase, N-terminal domain ABD1_17240 PF02803 Thiolase, C-terminal domain ABD1_17250 PF02667 Short chain fatty acid transporter ABD1_17260 PF01144 Coenzyme A transferase ABD1_17270 PF01144 Coenzyme A transferase ABD1_17280 PF03466 LysR substrate binding domain ABD1_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_17310 PF12833 Helix-turn-helix domain ABD1_17310 PF06719 AraC-type transcriptional regulator N-terminus ABD1_17320 PF07690 Major Facilitator Superfamily ABD1_17330 PF01738 Dienelactone hydrolase family ABD1_17360 PF01613 Flavin reductase like domain ABD1_17380 PF12833 Helix-turn-helix domain ABD1_17380 PF14525 AraC-binding-like domain ABD1_17390 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_17390 PF00970 Oxidoreductase FAD-binding domain ABD1_17390 PF00175 Oxidoreductase NAD-binding domain ABD1_17400 PF00866 Ring hydroxylating beta subunit ABD1_17410 PF00355 Rieske [2Fe-2S] domain ABD1_17410 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABD1_17440 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_17450 PF00005 ABC transporter ABD1_17450 PF03459 TOBE domain ABD1_17460 PF00106 short chain dehydrogenase ABD1_17470 PF00550 Phosphopantetheine attachment site ABD1_17470 PF00857 Isochorismatase family ABD1_17490 PF00149 Calcineurin-like phosphoesterase ABD1_17500 PF13089 Polyphosphate kinase N-terminal domain ABD1_17500 PF02503 Polyphosphate kinase middle domain ABD1_17500 PF13090 Polyphosphate kinase C-terminal domain 2 ABD1_17500 PF17941 Polyphosphate kinase C-terminal domain 1 ABD1_17510 PF08042 PqqA family ABD1_17520 PF12706 Beta-lactamase superfamily domain ABD1_17530 PF03070 TENA/THI-4/PQQC family ABD1_17540 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABD1_17550 PF13186 Iron-sulfur cluster-binding domain ABD1_17550 PF04055 Radical SAM superfamily ABD1_17560 PF01244 Membrane dipeptidase (Peptidase family M19) ABD1_17600 PF13091 PLD-like domain ABD1_17630 PF00199 Catalase ABD1_17650 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_17650 PF00107 Zinc-binding dehydrogenase ABD1_17680 PF00005 ABC transporter ABD1_17680 PF17755 UvrA DNA-binding domain ABD1_17680 PF17760 UvrA interaction domain ABD1_17690 PF00873 AcrB/AcrD/AcrF family ABD1_17700 PF00529 HlyD membrane-fusion protein of T1SS ABD1_17700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_17710 PF00072 Response regulator receiver domain ABD1_17710 PF00486 Transcriptional regulatory protein, C terminal ABD1_17720 PF00672 HAMP domain ABD1_17720 PF00512 His Kinase A (phospho-acceptor) domain ABD1_17720 PF16527 Two-component sensor protein CpxA, periplasmic domain ABD1_17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_17740 PF02311 AraC-like ligand binding domain ABD1_17740 PF12833 Helix-turn-helix domain ABD1_17750 PF12146 Serine aminopeptidase, S33 ABD1_17780 PF00271 Helicase conserved C-terminal domain ABD1_17840 PF04607 Region found in RelA / SpoT proteins ABD1_17840 PF02824 TGS domain ABD1_17840 PF13291 ACT domain ABD1_17860 PF01975 Survival protein SurE ABD1_17910 PF07690 Major Facilitator Superfamily ABD1_17920 PF13533 Biotin-lipoyl like ABD1_18010 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABD1_18020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABD1_18020 PF14572 Phosphoribosyl synthetase-associated domain ABD1_18040 PF00440 Bacterial regulatory proteins, tetR family ABD1_18060 PF00561 alpha/beta hydrolase fold ABD1_18070 PF07859 alpha/beta hydrolase fold ABD1_18110 PF00005 ABC transporter ABD1_18140 PF00107 Zinc-binding dehydrogenase ABD1_18140 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_18150 PF12833 Helix-turn-helix domain ABD1_18150 PF06719 AraC-type transcriptional regulator N-terminus ABD1_18160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABD1_18160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABD1_18170 PF07690 Major Facilitator Superfamily ABD1_18180 PF01370 NAD dependent epimerase/dehydratase family ABD1_18190 PF03466 LysR substrate binding domain ABD1_18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_18210 PF00920 Dehydratase family ABD1_18220 PF00171 Aldehyde dehydrogenase family ABD1_18250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_18250 PF00529 HlyD membrane-fusion protein of T1SS ABD1_18260 PF10425 C-terminus of bacterial fibrinogen-binding adhesin ABD1_18260 PF17961 Bacterial Ig domain ABD1_18260 PF04650 YSIRK type signal peptide ABD1_18260 PF00746 LPXTG cell wall anchor motif ABD1_18260 PF17210 SdrD B-like domain ABD1_18270 PF03466 LysR substrate binding domain ABD1_18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_18290 PF08450 SMP-30/Gluconolactonase/LRE-like region ABD1_18320 PF04909 Amidohydrolase ABD1_18330 PF07690 Major Facilitator Superfamily ABD1_18410 PF13193 AMP-binding enzyme C-terminal domain ABD1_18410 PF00501 AMP-binding enzyme ABD1_18430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_18430 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_18430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_18430 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABD1_18440 PF01575 MaoC like domain ABD1_18450 PF00106 short chain dehydrogenase ABD1_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_18480 PF03466 LysR substrate binding domain ABD1_18490 PF00440 Bacterial regulatory proteins, tetR family ABD1_18490 PF08359 YsiA-like protein, C-terminal region ABD1_18500 PF12706 Beta-lactamase superfamily domain ABD1_18520 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_18540 PF13411 MerR HTH family regulatory protein ABD1_18560 PF00106 short chain dehydrogenase ABD1_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_18570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_18580 PF00561 alpha/beta hydrolase fold ABD1_18600 PF00171 Aldehyde dehydrogenase family ABD1_18620 PF07690 Major Facilitator Superfamily ABD1_18630 PF00920 Dehydratase family ABD1_18640 PF07729 FCD domain ABD1_18640 PF00392 Bacterial regulatory proteins, gntR family ABD1_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_18660 PF03466 LysR substrate binding domain ABD1_18670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABD1_18670 PF13378 Enolase C-terminal domain-like ABD1_18680 PF02426 Muconolactone delta-isomerase ABD1_18690 PF04444 Catechol dioxygenase N terminus ABD1_18690 PF00775 Dioxygenase ABD1_18700 PF01144 Coenzyme A transferase ABD1_18710 PF01144 Coenzyme A transferase ABD1_18720 PF02803 Thiolase, C-terminal domain ABD1_18720 PF00108 Thiolase, N-terminal domain ABD1_18730 PF12146 Serine aminopeptidase, S33 ABD1_18740 PF01804 Penicillin amidase ABD1_18750 PF00171 Aldehyde dehydrogenase family ABD1_18770 PF01179 Copper amine oxidase, enzyme domain ABD1_18770 PF02728 Copper amine oxidase, N3 domain ABD1_18770 PF07833 Copper amine oxidase N-terminal domain ABD1_18770 PF02727 Copper amine oxidase, N2 domain ABD1_18780 PF02311 AraC-like ligand binding domain ABD1_18780 PF12833 Helix-turn-helix domain ABD1_18790 PF01613 Flavin reductase like domain ABD1_18800 PF00175 Oxidoreductase NAD-binding domain ABD1_18800 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_18830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABD1_18830 PF00355 Rieske [2Fe-2S] domain ABD1_18860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABD1_18870 PF01425 Amidase ABD1_18890 PF07690 Major Facilitator Superfamily ABD1_18910 PF00106 short chain dehydrogenase ABD1_18940 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_18940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_18940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_18950 PF03466 LysR substrate binding domain ABD1_18960 PF09339 IclR helix-turn-helix domain ABD1_18960 PF01614 Bacterial transcriptional regulator ABD1_18970 PF00753 Metallo-beta-lactamase superfamily ABD1_18990 PF04143 Sulphur transport ABD1_19010 PF01011 PQQ enzyme repeat ABD1_19010 PF13360 PQQ-like domain ABD1_19020 PF04966 Carbohydrate-selective porin, OprB family ABD1_19030 PF05048 Periplasmic copper-binding protein (NosD) ABD1_19040 PF01487 Type I 3-dehydroquinase ABD1_19050 PF00775 Dioxygenase ABD1_19060 PF00775 Dioxygenase ABD1_19060 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABD1_19070 PF02627 Carboxymuconolactone decarboxylase family ABD1_19080 PF07690 Major Facilitator Superfamily ABD1_19090 PF00561 alpha/beta hydrolase fold ABD1_19100 PF00206 Lyase ABD1_19100 PF10397 Adenylosuccinate lyase C-terminus ABD1_19110 PF02803 Thiolase, C-terminal domain ABD1_19110 PF00108 Thiolase, N-terminal domain ABD1_19120 PF01144 Coenzyme A transferase ABD1_19130 PF01144 Coenzyme A transferase ABD1_19140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABD1_19150 PF04977 Septum formation initiator ABD1_19160 PF04239 Protein of unknown function (DUF421) ABD1_19170 PF00113 Enolase, C-terminal TIM barrel domain ABD1_19170 PF03952 Enolase, N-terminal domain ABD1_19180 PF00793 DAHP synthetase I family ABD1_19190 PF00117 Glutamine amidotransferase class-I ABD1_19190 PF06418 CTP synthase N-terminus ABD1_19250 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_19250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_19280 PF00793 DAHP synthetase I family ABD1_19290 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABD1_19300 PF07724 AAA domain (Cdc48 subfamily) ABD1_19300 PF17871 AAA lid domain ABD1_19300 PF02861 Clp amino terminal domain, pathogenicity island component ABD1_19300 PF10431 C-terminal, D2-small domain, of ClpB protein ABD1_19300 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_19310 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABD1_19340 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABD1_19340 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABD1_19370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABD1_19380 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_19380 PF00585 C-terminal regulatory domain of Threonine dehydratase ABD1_19390 PF02254 TrkA-N domain ABD1_19390 PF02080 TrkA-C domain ABD1_19400 PF02386 Cation transport protein ABD1_19410 PF02253 Phospholipase A1 ABD1_19420 PF08367 Peptidase M16C associated ABD1_19420 PF00675 Insulinase (Peptidase family M16) ABD1_19420 PF05193 Peptidase M16 inactive domain ABD1_19430 PF07715 TonB-dependent Receptor Plug Domain ABD1_19430 PF00593 TonB dependent receptor ABD1_19440 PF00294 pfkB family carbohydrate kinase ABD1_19470 PF01654 Cytochrome bd terminal oxidase subunit I ABD1_19480 PF02322 Cytochrome bd terminal oxidase subunit II ABD1_19500 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABD1_19520 PF02881 SRP54-type protein, helical bundle domain ABD1_19520 PF00448 SRP54-type protein, GTPase domain ABD1_19570 PF00571 CBS domain ABD1_19570 PF00478 IMP dehydrogenase / GMP reductase domain ABD1_19580 PF00202 Aminotransferase class-III ABD1_19590 PF00462 Glutaredoxin ABD1_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_19610 PF03466 LysR substrate binding domain ABD1_19620 PF00557 Metallopeptidase family M24 ABD1_19630 PF05525 Branched-chain amino acid transport protein ABD1_19670 PF05524 PEP-utilising enzyme, N-terminal ABD1_19670 PF00391 PEP-utilising enzyme, mobile domain ABD1_19670 PF02896 PEP-utilising enzyme, TIM barrel domain ABD1_19670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABD1_19670 PF00381 PTS HPr component phosphorylation site ABD1_19680 PF00294 pfkB family carbohydrate kinase ABD1_19690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABD1_19690 PF02378 Phosphotransferase system, EIIC ABD1_19720 PF00563 EAL domain ABD1_19720 PF00990 Diguanylate cyclase, GGDEF domain ABD1_19720 PF03707 Bacterial signalling protein N terminal repeat ABD1_19740 PF07995 Glucose / Sorbosone dehydrogenase ABD1_19750 PF02586 SOS response associated peptidase (SRAP) ABD1_19760 PF01740 STAS domain ABD1_19760 PF00916 Sulfate permease family ABD1_19770 PF05922 Peptidase inhibitor I9 ABD1_19770 PF00082 Subtilase family ABD1_19790 PF00324 Amino acid permease ABD1_19800 PF00266 Aminotransferase class-V ABD1_19810 PF01037 Lrp/AsnC ligand binding domain ABD1_19860 PF13419 Haloacid dehalogenase-like hydrolase ABD1_19870 PF01479 S4 domain ABD1_19880 PF00154 recA bacterial DNA recombination protein ABD1_19890 PF02631 RecX family ABD1_19910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABD1_19910 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_19920 PF07977 FabA-like domain ABD1_19930 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_19930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABD1_19950 PF07244 Surface antigen variable number repeat ABD1_19950 PF01103 Surface antigen ABD1_19960 PF17820 PDZ domain ABD1_19960 PF13180 PDZ domain ABD1_19960 PF02163 Peptidase family M50 ABD1_19970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABD1_19970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABD1_19970 PF13288 DXP reductoisomerase C-terminal domain ABD1_19990 PF01255 Putative undecaprenyl diphosphate synthase ABD1_20000 PF01765 Ribosome recycling factor ABD1_20010 PF00696 Amino acid kinase family ABD1_20020 PF18693 TRAM domain ABD1_20020 PF00919 Uncharacterized protein family UPF0004 ABD1_20020 PF04055 Radical SAM superfamily ABD1_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_20030 PF00512 His Kinase A (phospho-acceptor) domain ABD1_20030 PF00989 PAS fold ABD1_20040 PF00072 Response regulator receiver domain ABD1_20040 PF00158 Sigma-54 interaction domain ABD1_20040 PF02954 Bacterial regulatory protein, Fis family ABD1_20050 PF00440 Bacterial regulatory proteins, tetR family ABD1_20060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABD1_20060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABD1_20080 PF02542 YgbB family ABD1_20100 PF01266 FAD dependent oxidoreductase ABD1_20130 PF10415 Fumarase C C-terminus ABD1_20130 PF00206 Lyase ABD1_20140 PF16363 GDP-mannose 4,6 dehydratase ABD1_20150 PF02635 DsrE/DsrF-like family ABD1_20190 PF00892 EamA-like transporter family ABD1_20200 PF00155 Aminotransferase class I and II ABD1_20200 PF00392 Bacterial regulatory proteins, gntR family ABD1_20210 PF01638 HxlR-like helix-turn-helix ABD1_20220 PF00994 Probable molybdopterin binding domain ABD1_20220 PF03453 MoeA N-terminal region (domain I and II) ABD1_20220 PF03454 MoeA C-terminal region (domain IV) ABD1_20230 PF01967 MoaC family ABD1_20230 PF00994 Probable molybdopterin binding domain ABD1_20240 PF02391 MoaE protein ABD1_20260 PF04055 Radical SAM superfamily ABD1_20260 PF06463 Molybdenum Cofactor Synthesis C ABD1_20270 PF00384 Molybdopterin oxidoreductase ABD1_20270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABD1_20270 PF01568 Molydopterin dinucleotide binding domain ABD1_20280 PF12804 MobA-like NTP transferase domain ABD1_20290 PF01568 Molydopterin dinucleotide binding domain ABD1_20290 PF00384 Molybdopterin oxidoreductase ABD1_20290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABD1_20290 PF04324 BFD-like [2Fe-2S] binding domain ABD1_20300 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABD1_20300 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_20300 PF04324 BFD-like [2Fe-2S] binding domain ABD1_20300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABD1_20300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABD1_20310 PF04324 BFD-like [2Fe-2S] binding domain ABD1_20310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABD1_20310 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABD1_20310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABD1_20310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_20310 PF13806 Rieske-like [2Fe-2S] domain ABD1_20320 PF00486 Transcriptional regulatory protein, C terminal ABD1_20320 PF00072 Response regulator receiver domain ABD1_20330 PF00005 ABC transporter ABD1_20340 PF11799 impB/mucB/samB family C-terminal domain ABD1_20340 PF00817 impB/mucB/samB family ABD1_20340 PF13438 Domain of unknown function (DUF4113) ABD1_20350 PF01220 Dehydroquinase class II ABD1_20360 PF00364 Biotin-requiring enzyme ABD1_20370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_20370 PF00289 Biotin carboxylase, N-terminal domain ABD1_20370 PF02785 Biotin carboxylase C-terminal domain ABD1_20390 PF12832 MFS_1 like family ABD1_20430 PF01645 Conserved region in glutamate synthase ABD1_20460 PF01565 FAD binding domain ABD1_20460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABD1_20470 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABD1_20490 PF00465 Iron-containing alcohol dehydrogenase ABD1_20500 PF03061 Thioesterase superfamily ABD1_20510 PF05506 Domain of unknown function (DUF756) ABD1_20510 PF04185 Phosphoesterase family ABD1_20520 PF12170 DNA polymerase III tau subunit V interacting with alpha ABD1_20520 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABD1_20520 PF12169 DNA polymerase III subunits gamma and tau domain III ABD1_20530 PF07690 Major Facilitator Superfamily ABD1_20580 PF00108 Thiolase, N-terminal domain ABD1_20580 PF02803 Thiolase, C-terminal domain ABD1_20600 PF03466 LysR substrate binding domain ABD1_20600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_20620 PF01810 LysE type translocator ABD1_20630 PF01037 Lrp/AsnC ligand binding domain ABD1_20640 PF03594 Benzoate membrane transport protein ABD1_20650 PF02308 MgtC family ABD1_20660 PF00689 Cation transporting ATPase, C-terminus ABD1_20660 PF00690 Cation transporter/ATPase, N-terminus ABD1_20700 PF00582 Universal stress protein family ABD1_20710 PF12848 ABC transporter ABD1_20710 PF00005 ABC transporter ABD1_20740 PF00593 TonB dependent receptor ABD1_20740 PF07715 TonB-dependent Receptor Plug Domain ABD1_20800 PF00924 Mechanosensitive ion channel ABD1_20810 PF07715 TonB-dependent Receptor Plug Domain ABD1_20810 PF00593 TonB dependent receptor ABD1_20820 PF00440 Bacterial regulatory proteins, tetR family ABD1_20840 PF01037 Lrp/AsnC ligand binding domain ABD1_20850 PF01817 Chorismate mutase type II ABD1_20900 PF13953 PapC C-terminal domain ABD1_20900 PF00577 Outer membrane usher protein ABD1_20900 PF13954 PapC N-terminal domain ABD1_20930 PF01433 Peptidase family M1 domain ABD1_20930 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABD1_20930 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABD1_20960 PF02110 Hydroxyethylthiazole kinase family ABD1_20980 PF14493 Helix-turn-helix domain ABD1_20980 PF05970 PIF1-like helicase ABD1_20990 PF00465 Iron-containing alcohol dehydrogenase ABD1_21020 PF00171 Aldehyde dehydrogenase family ABD1_21030 PF13520 Amino acid permease ABD1_21040 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABD1_21050 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABD1_21060 PF00117 Glutamine amidotransferase class-I ABD1_21060 PF00958 GMP synthase C terminal domain ABD1_21060 PF02540 NAD synthase ABD1_21070 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABD1_21070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABD1_21080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABD1_21090 PF00149 Calcineurin-like phosphoesterase ABD1_21100 PF00881 Nitroreductase family ABD1_21120 PF17209 Hfq protein ABD1_21140 PF01119 DNA mismatch repair protein, C-terminal domain ABD1_21140 PF08676 MutL C terminal dimerisation domain ABD1_21150 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABD1_21160 PF01479 S4 domain ABD1_21160 PF00849 RNA pseudouridylate synthase ABD1_21190 PF00849 RNA pseudouridylate synthase ABD1_21190 PF01479 S4 domain ABD1_21210 PF04284 Protein of unknown function (DUF441) ABD1_21220 PF03466 LysR substrate binding domain ABD1_21220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_21250 PF07690 Major Facilitator Superfamily ABD1_21260 PF00520 Ion transport protein ABD1_21260 PF00027 Cyclic nucleotide-binding domain ABD1_21280 PF11791 Aconitate B N-terminal domain ABD1_21280 PF06434 Aconitate hydratase 2 N-terminus ABD1_21280 PF00330 Aconitase family (aconitate hydratase) ABD1_21310 PF01103 Surface antigen ABD1_21310 PF17243 POTRA domain TamA domain 1 ABD1_21310 PF07244 Surface antigen variable number repeat ABD1_21320 PF07690 Major Facilitator Superfamily ABD1_21330 PF03232 Ubiquinone biosynthesis protein COQ7 ABD1_21350 PF00120 Glutamine synthetase, catalytic domain ABD1_21360 PF00072 Response regulator receiver domain ABD1_21360 PF00486 Transcriptional regulatory protein, C terminal ABD1_21370 PF00512 His Kinase A (phospho-acceptor) domain ABD1_21370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_21370 PF13493 Domain of unknown function (DUF4118) ABD1_21370 PF02702 Osmosensitive K+ channel His kinase sensor domain ABD1_21380 PF02669 K+-transporting ATPase, c chain ABD1_21400 PF03814 Potassium-transporting ATPase A subunit ABD1_21430 PF03109 ABC1 family ABD1_21440 PF00899 ThiF family ABD1_21450 PF01613 Flavin reductase like domain ABD1_21460 PF13193 AMP-binding enzyme C-terminal domain ABD1_21460 PF00501 AMP-binding enzyme ABD1_21470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_21470 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_21470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_21480 PF00106 short chain dehydrogenase ABD1_21490 PF12833 Helix-turn-helix domain ABD1_21500 PF13847 Methyltransferase domain ABD1_21500 PF17827 PrmC N-terminal domain ABD1_21510 PF03462 PCRF domain ABD1_21510 PF00472 RF-1 domain ABD1_21530 PF03466 LysR substrate binding domain ABD1_21530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_21560 PF00296 Luciferase-like monooxygenase ABD1_21580 PF13994 PgaD-like protein ABD1_21590 PF00535 Glycosyl transferase family 2 ABD1_21600 PF14883 Hypothetical glycosyl hydrolase family 13 ABD1_21600 PF01522 Polysaccharide deacetylase ABD1_21620 PF03618 Kinase/pyrophosphorylase ABD1_21630 PF02896 PEP-utilising enzyme, TIM barrel domain ABD1_21630 PF00391 PEP-utilising enzyme, mobile domain ABD1_21630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABD1_21650 PF06481 COX Aromatic Rich Motif ABD1_21650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABD1_21660 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABD1_21670 PF00510 Cytochrome c oxidase subunit III ABD1_21680 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABD1_21690 PF01040 UbiA prenyltransferase family ABD1_21700 PF01250 Ribosomal protein S6 ABD1_21710 PF01084 Ribosomal protein S18 ABD1_21720 PF01281 Ribosomal protein L9, N-terminal domain ABD1_21720 PF03948 Ribosomal protein L9, C-terminal domain ABD1_21730 PF00772 DnaB-like helicase N terminal domain ABD1_21730 PF03796 DnaB-like helicase C terminal domain ABD1_21740 PF00842 Alanine racemase, C-terminal domain ABD1_21740 PF01168 Alanine racemase, N-terminal domain ABD1_21760 PF01841 Transglutaminase-like superfamily ABD1_21760 PF08379 Bacterial transglutaminase-like N-terminal region ABD1_21780 PF14403 Circularly permuted ATP-grasp type 2 ABD1_21800 PF01134 Glucose inhibited division protein A ABD1_21800 PF13932 GidA associated domain ABD1_21840 PF02954 Bacterial regulatory protein, Fis family ABD1_21850 PF02142 MGS-like domain ABD1_21850 PF01808 AICARFT/IMPCHase bienzyme ABD1_21860 PF02843 Phosphoribosylglycinamide synthetase, C domain ABD1_21860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABD1_21860 PF02844 Phosphoribosylglycinamide synthetase, N domain ABD1_21870 PF03180 NLPA lipoprotein ABD1_21880 PF09383 NIL domain ABD1_21880 PF00005 ABC transporter ABD1_21890 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_21900 PF00753 Metallo-beta-lactamase superfamily ABD1_21900 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABD1_21920 PF00375 Sodium:dicarboxylate symporter family ABD1_21960 PF07995 Glucose / Sorbosone dehydrogenase ABD1_21970 PF00892 EamA-like transporter family ABD1_21980 PF01177 Asp/Glu/Hydantoin racemase ABD1_22000 PF02470 MlaD protein ABD1_22010 PF04403 Paraquat-inducible protein A ABD1_22070 PF00293 NUDIX domain ABD1_22080 PF08946 Osmosensory transporter coiled coil ABD1_22080 PF00083 Sugar (and other) transporter ABD1_22180 PF07729 FCD domain ABD1_22180 PF00392 Bacterial regulatory proteins, gntR family ABD1_22200 PF03616 Sodium/glutamate symporter ABD1_22210 PF00561 alpha/beta hydrolase fold ABD1_22260 PF04076 Bacterial OB fold (BOF) protein ABD1_22320 PF00324 Amino acid permease ABD1_22330 PF00171 Aldehyde dehydrogenase family ABD1_22340 PF00202 Aminotransferase class-III ABD1_22350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_22350 PF03466 LysR substrate binding domain ABD1_22360 PF00069 Protein kinase domain ABD1_22400 PF00814 Glycoprotease family ABD1_22410 PF01165 Ribosomal protein S21 ABD1_22420 PF09424 Yqey-like protein ABD1_22430 PF01435 Peptidase family M48 ABD1_22440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABD1_22440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABD1_22470 PF00156 Phosphoribosyl transferase domain ABD1_22490 PF01180 Dihydroorotate dehydrogenase ABD1_22530 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABD1_22530 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABD1_22540 PF00881 Nitroreductase family ABD1_22560 PF00271 Helicase conserved C-terminal domain ABD1_22560 PF00270 DEAD/DEAH box helicase ABD1_22570 PF00313 'Cold-shock' DNA-binding domain ABD1_22590 PF04545 Sigma-70, region 4 ABD1_22590 PF04542 Sigma-70 region 2 ABD1_22590 PF00140 Sigma-70 factor, region 1.2 ABD1_22600 PF04241 Protein of unknown function (DUF423) ABD1_22620 PF05690 Thiazole biosynthesis protein ThiG ABD1_22640 PF03883 Peroxide stress protein YaaA ABD1_22660 PF00158 Sigma-54 interaction domain ABD1_22660 PF06956 Regulator of RNA terminal phosphate cyclase ABD1_22670 PF00753 Metallo-beta-lactamase superfamily ABD1_22680 PF01139 tRNA-splicing ligase RtcB ABD1_22710 PF01137 RNA 3'-terminal phosphate cyclase ABD1_22710 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ABD1_22720 PF01546 Peptidase family M20/M25/M40 ABD1_22720 PF07687 Peptidase dimerisation domain ABD1_22740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABD1_22750 PF01817 Chorismate mutase type II ABD1_22750 PF00800 Prephenate dehydratase ABD1_22750 PF01842 ACT domain ABD1_22770 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_22770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_22770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_22780 PF00375 Sodium:dicarboxylate symporter family ABD1_22790 PF00117 Glutamine amidotransferase class-I ABD1_22790 PF00591 Glycosyl transferase family, a/b domain ABD1_22790 PF02885 Glycosyl transferase family, helical bundle domain ABD1_22800 PF07023 Protein of unknown function (DUF1315) ABD1_22810 PF01513 ATP-NAD kinase ABD1_22820 PF00912 Transglycosylase ABD1_22820 PF14814 Bifunctional transglycosylase second domain ABD1_22820 PF00905 Penicillin binding protein transpeptidase domain ABD1_22840 PF00293 NUDIX domain ABD1_22860 PF08521 Two-component sensor kinase N-terminal ABD1_22860 PF00512 His Kinase A (phospho-acceptor) domain ABD1_22860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_22870 PF00072 Response regulator receiver domain ABD1_22870 PF00486 Transcriptional regulatory protein, C terminal ABD1_22890 PF00437 Type II/IV secretion system protein ABD1_22910 PF18389 TrmO C-terminal domain ABD1_22910 PF01980 tRNA-methyltransferase O ABD1_22920 PF00970 Oxidoreductase FAD-binding domain ABD1_22920 PF00175 Oxidoreductase NAD-binding domain ABD1_22930 PF02567 Phenazine biosynthesis-like protein ABD1_22940 PF00155 Aminotransferase class I and II ABD1_22940 PF00392 Bacterial regulatory proteins, gntR family ABD1_22960 PF00037 4Fe-4S binding domain ABD1_22970 PF00893 Small Multidrug Resistance protein ABD1_22980 PF00005 ABC transporter ABD1_22990 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_23000 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_23010 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABD1_23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_23020 PF03466 LysR substrate binding domain ABD1_23030 PF13533 Biotin-lipoyl like ABD1_23040 PF00873 AcrB/AcrD/AcrF family ABD1_23050 PF02321 Outer membrane efflux protein ABD1_23060 PF00464 Serine hydroxymethyltransferase ABD1_23120 PF00005 ABC transporter ABD1_23130 PF01061 ABC-2 type transporter ABD1_23140 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABD1_23140 PF14489 QueF-like protein ABD1_23160 PF01098 Cell cycle protein ABD1_23170 PF13406 Transglycosylase SLT domain ABD1_23180 PF05036 Sporulation related domain ABD1_23180 PF03330 Lytic transglycolase ABD1_23210 PF12833 Helix-turn-helix domain ABD1_23230 PF00889 Elongation factor TS ABD1_23240 PF00318 Ribosomal protein S2 ABD1_23250 PF00557 Metallopeptidase family M24 ABD1_23270 PF07690 Major Facilitator Superfamily ABD1_23300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABD1_23300 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_23310 PF04055 Radical SAM superfamily ABD1_23320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_23320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_23320 PF09317 Domain of unknown function (DUF1974) ABD1_23350 PF05221 S-adenosyl-L-homocysteine hydrolase ABD1_23350 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABD1_23360 PF02219 Methylenetetrahydrofolate reductase ABD1_23370 PF04452 RNA methyltransferase ABD1_23380 PF03707 Bacterial signalling protein N terminal repeat ABD1_23380 PF00990 Diguanylate cyclase, GGDEF domain ABD1_23380 PF00563 EAL domain ABD1_23390 PF01515 Phosphate acetyl/butaryl transferase ABD1_23390 PF00390 Malic enzyme, N-terminal domain ABD1_23390 PF03949 Malic enzyme, NAD binding domain ABD1_23400 PF12627 Probable RNA and SrmB- binding site of polymerase A ABD1_23400 PF01743 Poly A polymerase head domain ABD1_23410 PF13180 PDZ domain ABD1_23420 PF01784 NIF3 (NGG1p interacting factor 3) ABD1_23430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABD1_23430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABD1_23470 PF01040 UbiA prenyltransferase family ABD1_23480 PF04345 Chorismate lyase ABD1_23500 PF00854 POT family ABD1_23520 PF00117 Glutamine amidotransferase class-I ABD1_23530 PF01433 Peptidase family M1 domain ABD1_23530 PF11838 ERAP1-like C-terminal domain ABD1_23540 PF07715 TonB-dependent Receptor Plug Domain ABD1_23540 PF00593 TonB dependent receptor ABD1_23550 PF02885 Glycosyl transferase family, helical bundle domain ABD1_23550 PF00591 Glycosyl transferase family, a/b domain ABD1_23560 PF00218 Indole-3-glycerol phosphate synthase ABD1_23590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABD1_23590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABD1_23600 PF01799 [2Fe-2S] binding domain ABD1_23600 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_23620 PF00144 Beta-lactamase ABD1_23650 PF05675 Protein of unknown function (DUF817) ABD1_23660 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABD1_23680 PF00425 chorismate binding enzyme ABD1_23700 PF00975 Thioesterase domain ABD1_23710 PF00005 ABC transporter ABD1_23710 PF00664 ABC transporter transmembrane region ABD1_23720 PF00664 ABC transporter transmembrane region ABD1_23720 PF00005 ABC transporter ABD1_23740 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABD1_23750 PF00857 Isochorismatase family ABD1_23750 PF00550 Phosphopantetheine attachment site ABD1_23760 PF13193 AMP-binding enzyme C-terminal domain ABD1_23760 PF00501 AMP-binding enzyme ABD1_23770 PF00550 Phosphopantetheine attachment site ABD1_23770 PF00668 Condensation domain ABD1_23770 PF00501 AMP-binding enzyme ABD1_23780 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABD1_23790 PF00593 TonB dependent receptor ABD1_23790 PF07715 TonB-dependent Receptor Plug Domain ABD1_23800 PF01497 Periplasmic binding protein ABD1_23810 PF00005 ABC transporter ABD1_23820 PF01032 FecCD transport family ABD1_23830 PF01032 FecCD transport family ABD1_23840 PF00975 Thioesterase domain ABD1_23840 PF00550 Phosphopantetheine attachment site ABD1_23840 PF00668 Condensation domain ABD1_23840 PF13193 AMP-binding enzyme C-terminal domain ABD1_23840 PF00501 AMP-binding enzyme ABD1_23850 PF00668 Condensation domain ABD1_23850 PF00550 Phosphopantetheine attachment site ABD1_23850 PF00501 AMP-binding enzyme ABD1_23850 PF13193 AMP-binding enzyme C-terminal domain ABD1_23870 PF13309 HTH domain ABD1_23870 PF08348 YheO-like PAS domain ABD1_23880 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_23890 PF17954 Quercetinase C-terminal cupin domain ABD1_23890 PF02678 Pirin ABD1_23930 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABD1_23930 PF12833 Helix-turn-helix domain ABD1_23940 PF01370 NAD dependent epimerase/dehydratase family ABD1_23960 PF00561 alpha/beta hydrolase fold ABD1_23970 PF00743 Flavin-binding monooxygenase-like ABD1_23990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_23990 PF03466 LysR substrate binding domain ABD1_24000 PF00857 Isochorismatase family ABD1_24070 PF04328 Selenoprotein, putative ABD1_24080 PF02554 Carbon starvation protein CstA ABD1_24080 PF13722 5TM C-terminal transporter carbon starvation CstA ABD1_24090 PF08207 Elongation factor P (EF-P) KOW-like domain ABD1_24090 PF01132 Elongation factor P (EF-P) OB domain ABD1_24090 PF09285 Elongation factor P, C-terminal ABD1_24100 PF04055 Radical SAM superfamily ABD1_24120 PF12792 CSS motif domain associated with EAL ABD1_24120 PF00563 EAL domain ABD1_24130 PF01197 Ribosomal protein L31 ABD1_24140 PF13593 SBF-like CPA transporter family (DUF4137) ABD1_24150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABD1_24160 PF07690 Major Facilitator Superfamily ABD1_24170 PF05362 Lon protease (S16) C-terminal proteolytic domain ABD1_24170 PF13654 AAA domain ABD1_24180 PF03466 LysR substrate binding domain ABD1_24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_24190 PF01551 Peptidase family M23 ABD1_24190 PF01476 LysM domain ABD1_24200 PF01975 Survival protein SurE ABD1_24230 PF07943 Penicillin-binding protein 5, C-terminal domain ABD1_24230 PF00768 D-alanyl-D-alanine carboxypeptidase ABD1_24240 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_24250 PF13344 Haloacid dehalogenase-like hydrolase ABD1_24250 PF00293 NUDIX domain ABD1_24270 PF04356 Protein of unknown function (DUF489) ABD1_24280 PF08328 Adenylosuccinate lyase C-terminal ABD1_24280 PF00206 Lyase ABD1_24310 PF01343 Peptidase family S49 ABD1_24310 PF08496 Peptidase family S49 N-terminal ABD1_24320 PF00005 ABC transporter ABD1_24330 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_24340 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_24350 PF12849 PBP superfamily domain ABD1_24360 PF00324 Amino acid permease ABD1_24370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABD1_24370 PF00205 Thiamine pyrophosphate enzyme, central domain ABD1_24370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABD1_24380 PF01037 Lrp/AsnC ligand binding domain ABD1_24390 PF00171 Aldehyde dehydrogenase family ABD1_24400 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABD1_24410 PF00202 Aminotransferase class-III ABD1_24440 PF02525 Flavodoxin-like fold ABD1_24450 PF00487 Fatty acid desaturase ABD1_24460 PF00970 Oxidoreductase FAD-binding domain ABD1_24460 PF00111 2Fe-2S iron-sulfur cluster binding domain ABD1_24460 PF00175 Oxidoreductase NAD-binding domain ABD1_24470 PF00440 Bacterial regulatory proteins, tetR family ABD1_24490 PF12137 RNA polymerase recycling family C-terminal ABD1_24490 PF00271 Helicase conserved C-terminal domain ABD1_24490 PF00176 SNF2 family N-terminal domain ABD1_24490 PF18337 RapA N-terminal Tudor like domain ABD1_24490 PF18339 RapA N-terminal Tudor like domain 1 ABD1_24500 PF00849 RNA pseudouridylate synthase ABD1_24520 PF00202 Aminotransferase class-III ABD1_24530 PF02581 Thiamine monophosphate synthase ABD1_24580 PF00675 Insulinase (Peptidase family M16) ABD1_24580 PF05193 Peptidase M16 inactive domain ABD1_24590 PF02567 Phenazine biosynthesis-like protein ABD1_24610 PF03466 LysR substrate binding domain ABD1_24610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_24620 PF06779 Uncharacterised MFS-type transporter YbfB ABD1_24650 PF00180 Isocitrate/isopropylmalate dehydrogenase ABD1_24660 PF00849 RNA pseudouridylate synthase ABD1_24670 PF03971 Monomeric isocitrate dehydrogenase ABD1_24690 PF07943 Penicillin-binding protein 5, C-terminal domain ABD1_24690 PF00768 D-alanyl-D-alanine carboxypeptidase ABD1_24700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_24710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABD1_24720 PF03441 FAD binding domain of DNA photolyase ABD1_24720 PF00875 DNA photolyase ABD1_24780 PF02350 UDP-N-acetylglucosamine 2-epimerase ABD1_24810 PF03060 Nitronate monooxygenase ABD1_24820 PF01207 Dihydrouridine synthase (Dus) ABD1_24830 PF07759 Protein of unknown function (DUF1615) ABD1_24850 PF01472 PUA domain ABD1_24850 PF00696 Amino acid kinase family ABD1_24860 PF01018 GTP1/OBG ABD1_24860 PF01926 50S ribosome-binding GTPase ABD1_24890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABD1_24890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABD1_24900 PF00892 EamA-like transporter family ABD1_24920 PF12344 Ultra-violet resistance protein B ABD1_24920 PF17757 UvrB interaction domain ABD1_24920 PF00271 Helicase conserved C-terminal domain ABD1_24920 PF04851 Type III restriction enzyme, res subunit ABD1_24920 PF02151 UvrB/uvrC motif ABD1_24940 PF00990 Diguanylate cyclase, GGDEF domain ABD1_24940 PF17151 Periplasmic sensor domain ABD1_25000 PF00106 short chain dehydrogenase ABD1_25010 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABD1_25020 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABD1_25030 PF02565 Recombination protein O C terminal ABD1_25030 PF11967 Recombination protein O N terminal ABD1_25050 PF07650 KH domain ABD1_25050 PF01926 50S ribosome-binding GTPase ABD1_25060 PF00035 Double-stranded RNA binding motif ABD1_25060 PF14622 Ribonuclease-III-like ABD1_25080 PF10502 Signal peptidase, peptidase S26 ABD1_25090 PF03144 Elongation factor Tu domain 2 ABD1_25090 PF06421 GTP-binding protein LepA C-terminus ABD1_25090 PF00679 Elongation factor G C-terminus ABD1_25090 PF00009 Elongation factor Tu GTP binding domain ABD1_25100 PF13302 Acetyltransferase (GNAT) domain ABD1_25120 PF13180 PDZ domain ABD1_25130 PF02910 Fumarate reductase flavoprotein C-term ABD1_25130 PF00890 FAD binding domain ABD1_25150 PF02223 Thymidylate kinase ABD1_25160 PF02618 YceG-like family ABD1_25170 PF01063 Amino-transferase class IV ABD1_25200 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_25210 PF00528 Binding-protein-dependent transport system inner membrane component ABD1_25220 PF00005 ABC transporter ABD1_25220 PF12857 TOBE-like domain ABD1_25230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_25230 PF03466 LysR substrate binding domain ABD1_25250 PF14602 Hexapeptide repeat of succinyl-transferase ABD1_25250 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_25250 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABD1_25270 PF06508 Queuosine biosynthesis protein QueC ABD1_25300 PF00578 AhpC/TSA family ABD1_25330 PF00378 Enoyl-CoA hydratase/isomerase ABD1_25340 PF01784 NIF3 (NGG1p interacting factor 3) ABD1_25360 PF07690 Major Facilitator Superfamily ABD1_25370 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABD1_25370 PF02769 AIR synthase related protein, C-terminal domain ABD1_25370 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABD1_25380 PF01966 HD domain ABD1_25390 PF01330 RuvA N terminal domain ABD1_25390 PF07499 RuvA, C-terminal domain ABD1_25400 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABD1_25400 PF05491 RuvB C-terminal winged helix domain ABD1_25400 PF17864 RuvB AAA lid domain ABD1_25410 PF01546 Peptidase family M20/M25/M40 ABD1_25410 PF07687 Peptidase dimerisation domain ABD1_25420 PF03061 Thioesterase superfamily ABD1_25430 PF01618 MotA/TolQ/ExbB proton channel family ABD1_25440 PF02472 Biopolymer transport protein ExbD/TolR ABD1_25460 PF04052 TolB amino-terminal domain ABD1_25460 PF07676 WD40-like Beta Propeller Repeat ABD1_25470 PF00691 OmpA family ABD1_25490 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABD1_25500 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABD1_25500 PF00588 SpoU rRNA Methylase family ABD1_25560 PF11638 DnaA N-terminal domain ABD1_25560 PF08299 Bacterial dnaA protein helix-turn-helix ABD1_25560 PF00308 Bacterial dnaA protein ABD1_25570 PF01594 AI-2E family transporter ABD1_25580 PF00586 AIR synthase related protein, N-terminal domain ABD1_25580 PF02769 AIR synthase related protein, C-terminal domain ABD1_25590 PF00551 Formyl transferase ABD1_25600 PF12697 Alpha/beta hydrolase family ABD1_25610 PF01343 Peptidase family S49 ABD1_25610 PF06965 Na+/H+ antiporter 1 ABD1_25630 PF00753 Metallo-beta-lactamase superfamily ABD1_25630 PF13567 Domain of unknown function (DUF4131) ABD1_25630 PF03772 Competence protein ABD1_25640 PF00005 ABC transporter ABD1_25650 PF12704 MacB-like periplasmic core domain ABD1_25650 PF02687 FtsX-like permease family ABD1_25670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABD1_25700 PF00266 Aminotransferase class-V ABD1_25720 PF13533 Biotin-lipoyl like ABD1_25760 PF00535 Glycosyl transferase family 2 ABD1_25790 PF00521 DNA gyrase/topoisomerase IV, subunit A ABD1_25790 PF03989 DNA gyrase C-terminal domain, beta-propeller ABD1_25800 PF00766 Electron transfer flavoprotein FAD-binding domain ABD1_25800 PF01012 Electron transfer flavoprotein domain ABD1_25810 PF01012 Electron transfer flavoprotein domain ABD1_25820 PF02899 Phage integrase, N-terminal SAM-like domain ABD1_25820 PF00589 Phage integrase family ABD1_25830 PF01810 LysE type translocator ABD1_25840 PF01678 Diaminopimelate epimerase ABD1_25850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABD1_25850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABD1_25870 PF00324 Amino acid permease ABD1_25880 PF18073 Rubredoxin metal binding domain ABD1_25900 PF00152 tRNA synthetases class II (D, K and N) ABD1_25910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABD1_25910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABD1_25910 PF11890 Domain of unknown function (DUF3410) ABD1_25920 PF06803 Protein of unknown function (DUF1232) ABD1_25930 PF02634 FdhD/NarQ family ABD1_25940 PF00384 Molybdopterin oxidoreductase ABD1_25950 PF02595 Glycerate kinase family ABD1_25980 PF00881 Nitroreductase family ABD1_26020 PF09857 Putative toxin of bacterial toxin-antitoxin pair ABD1_26040 PF00501 AMP-binding enzyme ABD1_26040 PF13193 AMP-binding enzyme C-terminal domain ABD1_26040 PF00975 Thioesterase domain ABD1_26040 PF00550 Phosphopantetheine attachment site ABD1_26040 PF00668 Condensation domain ABD1_26060 PF03449 Transcription elongation factor, N-terminal ABD1_26060 PF01272 Transcription elongation factor, GreA/GreB, C-term ABD1_26070 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABD1_26070 PF01464 Transglycosylase SLT domain ABD1_26090 PF01171 PP-loop family ABD1_26100 PF01464 Transglycosylase SLT domain ABD1_26110 PF01435 Peptidase family M48 ABD1_26130 PF00873 AcrB/AcrD/AcrF family ABD1_26140 PF03009 Glycerophosphoryl diester phosphodiesterase family ABD1_26160 PF01219 Prokaryotic diacylglycerol kinase ABD1_26170 PF00118 TCP-1/cpn60 chaperonin family ABD1_26180 PF00166 Chaperonin 10 Kd subunit ABD1_26190 PF00149 Calcineurin-like phosphoesterase ABD1_26200 PF00781 Diacylglycerol kinase catalytic domain ABD1_26210 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABD1_26210 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABD1_26220 PF01266 FAD dependent oxidoreductase ABD1_26220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABD1_26230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABD1_26230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABD1_26240 PF00083 Sugar (and other) transporter ABD1_26270 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABD1_26270 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABD1_26280 PF09423 PhoD-like phosphatase ABD1_26280 PF16655 PhoD-like phosphatase, N-terminal domain ABD1_26310 PF00809 Pterin binding enzyme ABD1_26320 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_26320 PF17862 AAA+ lid domain ABD1_26320 PF01434 Peptidase family M41 ABD1_26320 PF06480 FtsH Extracellular ABD1_26330 PF01728 FtsJ-like methyltransferase ABD1_26340 PF01985 CRS1 / YhbY (CRM) domain ABD1_26370 PF00117 Glutamine amidotransferase class-I ABD1_26370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABD1_26380 PF02142 MGS-like domain ABD1_26380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_26380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABD1_26390 PF03449 Transcription elongation factor, N-terminal ABD1_26390 PF01272 Transcription elongation factor, GreA/GreB, C-term ABD1_26400 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_26410 PF00582 Universal stress protein family ABD1_26420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABD1_26440 PF09587 Bacterial capsule synthesis protein PGA_cap ABD1_26450 PF00999 Sodium/hydrogen exchanger family ABD1_26460 PF04228 Putative neutral zinc metallopeptidase ABD1_26470 PF05661 Protein of unknown function (DUF808) ABD1_26480 PF00579 tRNA synthetases class I (W and Y) ABD1_26490 PF00549 CoA-ligase ABD1_26490 PF02629 CoA binding domain ABD1_26500 PF08442 ATP-grasp domain ABD1_26500 PF00549 CoA-ligase ABD1_26510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABD1_26510 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_26520 PF02817 e3 binding domain ABD1_26520 PF00364 Biotin-requiring enzyme ABD1_26520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABD1_26530 PF16078 2-oxoglutarate dehydrogenase N-terminus ABD1_26530 PF00676 Dehydrogenase E1 component ABD1_26530 PF16870 2-oxoglutarate dehydrogenase C-terminal ABD1_26530 PF02779 Transketolase, pyrimidine binding domain ABD1_26540 PF13085 2Fe-2S iron-sulfur cluster binding domain ABD1_26550 PF00890 FAD binding domain ABD1_26550 PF02910 Fumarate reductase flavoprotein C-term ABD1_26560 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABD1_26570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABD1_26580 PF00285 Citrate synthase, C-terminal domain ABD1_26640 PF04546 Sigma-70, non-essential region ABD1_26640 PF03979 Sigma-70 factor, region 1.1 ABD1_26640 PF04539 Sigma-70 region 3 ABD1_26640 PF00140 Sigma-70 factor, region 1.2 ABD1_26640 PF04545 Sigma-70, region 4 ABD1_26640 PF04542 Sigma-70 region 2 ABD1_26650 PF04359 Protein of unknown function (DUF493) ABD1_26660 PF03099 Biotin/lipoate A/B protein ligase family ABD1_26680 PF00465 Iron-containing alcohol dehydrogenase ABD1_26690 PF13520 Amino acid permease ABD1_26700 PF03358 NADPH-dependent FMN reductase ABD1_26710 PF01638 HxlR-like helix-turn-helix ABD1_26720 PF00588 SpoU rRNA Methylase family ABD1_26730 PF10414 Sirohaem synthase dimerisation region ABD1_26730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABD1_26730 PF14824 Sirohaem biosynthesis protein central ABD1_26740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABD1_26740 PF02403 Seryl-tRNA synthetase N-terminal domain ABD1_26760 PF03548 Outer membrane lipoprotein carrier protein LolA ABD1_26770 PF01016 Ribosomal L27 protein ABD1_26780 PF00829 Ribosomal prokaryotic L21 protein ABD1_26790 PF00348 Polyprenyl synthetase ABD1_26810 PF01569 PAP2 superfamily ABD1_26820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_26820 PF00529 HlyD membrane-fusion protein of T1SS ABD1_26830 PF00873 AcrB/AcrD/AcrF family ABD1_26840 PF02321 Outer membrane efflux protein ABD1_26850 PF01906 Putative heavy-metal-binding ABD1_26860 PF01906 Putative heavy-metal-binding ABD1_26900 PF08264 Anticodon-binding domain of tRNA ABD1_26900 PF00133 tRNA synthetases class I (I, L, M and V) ABD1_26900 PF10458 Valyl tRNA synthetase tRNA binding arm ABD1_26940 PF03466 LysR substrate binding domain ABD1_26940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_26950 PF00909 Ammonium Transporter Family ABD1_26970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_26970 PF08521 Two-component sensor kinase N-terminal ABD1_26970 PF00512 His Kinase A (phospho-acceptor) domain ABD1_26980 PF00072 Response regulator receiver domain ABD1_26980 PF00486 Transcriptional regulatory protein, C terminal ABD1_26990 PF00884 Sulfatase ABD1_26990 PF08019 Phosphoethanolamine transferase EptA/EptB ABD1_27030 PF01734 Patatin-like phospholipase ABD1_27050 PF01145 SPFH domain / Band 7 family ABD1_27060 PF04237 YjbR ABD1_27070 PF00348 Polyprenyl synthetase ABD1_27080 PF04303 PrpF protein ABD1_27090 PF00324 Amino acid permease ABD1_27110 PF01965 DJ-1/PfpI family ABD1_27120 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_27120 PF00698 Acyl transferase domain ABD1_27120 PF00109 Beta-ketoacyl synthase, N-terminal domain ABD1_27120 PF08990 Erythronolide synthase docking ABD1_27120 PF09277 Erythronolide synthase, docking ABD1_27120 PF16197 Ketoacyl-synthetase C-terminal extension ABD1_27120 PF02801 Beta-ketoacyl synthase, C-terminal domain ABD1_27120 PF08659 KR domain ABD1_27120 PF00550 Phosphopantetheine attachment site ABD1_27120 PF14765 Polyketide synthase dehydratase ABD1_27130 PF06719 AraC-type transcriptional regulator N-terminus ABD1_27130 PF12833 Helix-turn-helix domain ABD1_27140 PF02673 Bacitracin resistance protein BacA ABD1_27180 PF02525 Flavodoxin-like fold ABD1_27210 PF01507 Phosphoadenosine phosphosulfate reductase family ABD1_27220 PF06974 Protein of unknown function (DUF1298) ABD1_27220 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABD1_27240 PF10150 Ribonuclease E/G family ABD1_27240 PF00575 S1 RNA binding domain ABD1_27250 PF02545 Maf-like protein ABD1_27270 PF04085 rod shape-determining protein MreC ABD1_27290 PF02686 Glu-tRNAGln amidotransferase C subunit ABD1_27300 PF01425 Amidase ABD1_27310 PF02637 GatB domain ABD1_27310 PF02934 GatB/GatE catalytic domain ABD1_27360 PF01431 Peptidase family M13 ABD1_27360 PF05649 Peptidase family M13 ABD1_27370 PF05992 SbmA/BacA-like family ABD1_27380 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_27380 PF13291 ACT domain ABD1_27390 PF01734 Patatin-like phospholipase ABD1_27400 PF01235 Sodium:alanine symporter family ABD1_27430 PF00881 Nitroreductase family ABD1_27440 PF07690 Major Facilitator Superfamily ABD1_27450 PF12805 FUSC-like inner membrane protein yccS ABD1_27470 PF00175 Oxidoreductase NAD-binding domain ABD1_27470 PF00258 Flavodoxin ABD1_27470 PF00667 FAD binding domain ABD1_27490 PF17969 L,D-transpeptidase C-terminal domain ABD1_27490 PF03734 L,D-transpeptidase catalytic domain ABD1_27500 PF04304 Protein of unknown function (DUF454) ABD1_27520 PF08085 Entericidin EcnA/B family ABD1_27530 PF07687 Peptidase dimerisation domain ABD1_27530 PF01546 Peptidase family M20/M25/M40 ABD1_27560 PF01584 CheW-like domain ABD1_27560 PF00072 Response regulator receiver domain ABD1_27560 PF01627 Hpt domain ABD1_27560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_27570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABD1_27570 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABD1_27580 PF01584 CheW-like domain ABD1_27590 PF00072 Response regulator receiver domain ABD1_27600 PF00072 Response regulator receiver domain ABD1_27630 PF00873 AcrB/AcrD/AcrF family ABD1_27640 PF03129 Anticodon binding domain ABD1_27640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABD1_27640 PF04073 Aminoacyl-tRNA editing domain ABD1_27650 PF07411 Domain of unknown function (DUF1508) ABD1_27660 PF03831 PhnA domain ABD1_27660 PF08274 PhnA Zinc-Ribbon ABD1_27670 PF04343 Protein of unknown function, DUF488 ABD1_27690 PF01571 Aminomethyltransferase folate-binding domain ABD1_27700 PF10411 Disulfide bond isomerase protein N-terminus ABD1_27700 PF13098 Thioredoxin-like domain ABD1_27720 PF03547 Membrane transport protein ABD1_27730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_27740 PF07715 TonB-dependent Receptor Plug Domain ABD1_27740 PF00593 TonB dependent receptor ABD1_27750 PF02245 Methylpurine-DNA glycosylase (MPG) ABD1_27760 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABD1_27760 PF06827 Zinc finger found in FPG and IleRS ABD1_27760 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABD1_27790 PF01741 Large-conductance mechanosensitive channel, MscL ABD1_27810 PF00860 Permease family ABD1_27820 PF08468 Methyltransferase small domain N-terminal ABD1_27820 PF05175 Methyltransferase small domain ABD1_27830 PF00324 Amino acid permease ABD1_27840 PF01139 tRNA-splicing ligase RtcB ABD1_27860 PF00691 OmpA family ABD1_27860 PF13505 Outer membrane protein beta-barrel domain ABD1_27880 PF02803 Thiolase, C-terminal domain ABD1_27880 PF00108 Thiolase, N-terminal domain ABD1_27900 PF00893 Small Multidrug Resistance protein ABD1_27920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABD1_27920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABD1_27930 PF01011 PQQ enzyme repeat ABD1_27940 PF04966 Carbohydrate-selective porin, OprB family ABD1_27950 PF02515 CoA-transferase family III ABD1_27970 PF00108 Thiolase, N-terminal domain ABD1_27970 PF02803 Thiolase, C-terminal domain ABD1_27980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABD1_27980 PF00378 Enoyl-CoA hydratase/isomerase ABD1_27980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABD1_28030 PF03006 Haemolysin-III related ABD1_28040 PF00083 Sugar (and other) transporter ABD1_28040 PF07690 Major Facilitator Superfamily ABD1_28060 PF07516 SecA Wing and Scaffold domain ABD1_28060 PF02810 SEC-C motif ABD1_28060 PF07517 SecA DEAD-like domain ABD1_28060 PF01043 SecA preprotein cross-linking domain ABD1_28070 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABD1_28070 PF00578 AhpC/TSA family ABD1_28080 PF00753 Metallo-beta-lactamase superfamily ABD1_28110 PF02875 Mur ligase family, glutamate ligase domain ABD1_28110 PF08245 Mur ligase middle domain ABD1_28120 PF01039 Carboxyl transferase domain ABD1_28130 PF00290 Tryptophan synthase alpha chain ABD1_28180 PF00291 Pyridoxal-phosphate dependent enzyme ABD1_28190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABD1_28200 PF00593 TonB dependent receptor ABD1_28200 PF07715 TonB-dependent Receptor Plug Domain ABD1_28210 PF01923 Cobalamin adenosyltransferase ABD1_28250 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABD1_28260 PF00486 Transcriptional regulatory protein, C terminal ABD1_28260 PF00072 Response regulator receiver domain ABD1_28270 PF00512 His Kinase A (phospho-acceptor) domain ABD1_28270 PF00672 HAMP domain ABD1_28270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_28290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_28290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_28290 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_28290 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABD1_28300 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_28300 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABD1_28300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_28300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_28310 PF06146 Phosphate-starvation-inducible E ABD1_28350 PF00593 TonB dependent receptor ABD1_28350 PF07715 TonB-dependent Receptor Plug Domain ABD1_28370 PF02938 GAD domain ABD1_28370 PF00152 tRNA synthetases class II (D, K and N) ABD1_28370 PF01336 OB-fold nucleic acid binding domain ABD1_28400 PF02350 UDP-N-acetylglucosamine 2-epimerase ABD1_28430 PF13439 Glycosyltransferase Family 4 ABD1_28430 PF00534 Glycosyl transferases group 1 ABD1_28440 PF00535 Glycosyl transferase family 2 ABD1_28450 PF01522 Polysaccharide deacetylase ABD1_28480 PF01063 Amino-transferase class IV ABD1_28490 PF08335 GlnD PII-uridylyltransferase ABD1_28490 PF03710 Glutamate-ammonia ligase adenylyltransferase ABD1_28500 PF07689 KaiB domain ABD1_28500 PF00512 His Kinase A (phospho-acceptor) domain ABD1_28500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_28510 PF02547 Queuosine biosynthesis protein ABD1_28550 PF01702 Queuine tRNA-ribosyltransferase ABD1_28560 PF02699 Preprotein translocase subunit ABD1_28570 PF02355 Protein export membrane protein ABD1_28570 PF13721 SecD export protein N-terminal TM region ABD1_28570 PF07549 SecD/SecF GG Motif ABD1_28580 PF02355 Protein export membrane protein ABD1_28580 PF07549 SecD/SecF GG Motif ABD1_28590 PF04127 DNA / pantothenate metabolism flavoprotein ABD1_28590 PF02441 Flavoprotein ABD1_28600 PF04002 RadC-like JAB domain ABD1_28610 PF01062 Bestrophin, RFP-TM, chloride channel ABD1_28620 PF02811 PHP domain ABD1_28630 PF04279 Intracellular septation protein A ABD1_28640 PF03795 YCII-related domain ABD1_28660 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABD1_28660 PF01266 FAD dependent oxidoreductase ABD1_28680 PF04461 Protein of unknown function (DUF520) ABD1_28700 PF03061 Thioesterase superfamily ABD1_28710 PF00085 Thioredoxin ABD1_28720 PF00561 alpha/beta hydrolase fold ABD1_28730 PF00753 Metallo-beta-lactamase superfamily ABD1_28730 PF04273 Putative phosphatase (DUF442) ABD1_28750 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_28750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABD1_28770 PF17152 Periplasmic sensor domain ABD1_28770 PF00990 Diguanylate cyclase, GGDEF domain ABD1_28780 PF01389 OmpA-like transmembrane domain ABD1_28780 PF00691 OmpA family ABD1_28790 PF00149 Calcineurin-like phosphoesterase ABD1_28800 PF13091 PLD-like domain ABD1_28820 PF13167 GTP-binding GTPase N-terminal ABD1_28820 PF16360 GTP-binding GTPase Middle Region ABD1_28820 PF01926 50S ribosome-binding GTPase ABD1_28860 PF00149 Calcineurin-like phosphoesterase ABD1_28870 PF00398 Ribosomal RNA adenine dimethylase ABD1_28880 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABD1_28890 PF00572 Ribosomal protein L13 ABD1_28900 PF00380 Ribosomal protein S9/S16 ABD1_28910 PF13417 Glutathione S-transferase, N-terminal domain ABD1_28910 PF00043 Glutathione S-transferase, C-terminal domain ABD1_28920 PF04386 Stringent starvation protein B ABD1_28940 PF02785 Biotin carboxylase C-terminal domain ABD1_28940 PF00364 Biotin-requiring enzyme ABD1_28940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABD1_28940 PF00289 Biotin carboxylase, N-terminal domain ABD1_28960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_28960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_28960 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_28970 PF01039 Carboxyl transferase domain ABD1_29000 PF00440 Bacterial regulatory proteins, tetR family ABD1_29000 PF17932 Tetracyclin repressor-like, C-terminal domain ABD1_29010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_29010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_29010 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_29050 PF01066 CDP-alcohol phosphatidyltransferase ABD1_29060 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABD1_29100 PF00056 lactate/malate dehydrogenase, NAD binding domain ABD1_29100 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABD1_29120 PF01464 Transglycosylase SLT domain ABD1_29120 PF10145 Phage-related minor tail protein ABD1_29120 PF01551 Peptidase family M23 ABD1_29130 PF01938 TRAM domain ABD1_29130 PF00919 Uncharacterized protein family UPF0004 ABD1_29130 PF04055 Radical SAM superfamily ABD1_29140 PF02562 PhoH-like protein ABD1_29150 PF02130 Uncharacterized protein family UPF0054 ABD1_29200 PF03358 NADPH-dependent FMN reductase ABD1_29210 PF03631 Virulence factor BrkB ABD1_29220 PF00892 EamA-like transporter family ABD1_29230 PF12833 Helix-turn-helix domain ABD1_29240 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABD1_29290 PF08206 Ribonuclease B OB domain ABD1_29290 PF17876 Cold shock domain ABD1_29290 PF00773 RNB domain ABD1_29290 PF08461 Ribonuclease R winged-helix domain ABD1_29290 PF00575 S1 RNA binding domain ABD1_29300 PF01432 Peptidase family M3 ABD1_29310 PF09526 Probable metal-binding protein (DUF2387) ABD1_29370 PF03937 Flavinator of succinate dehydrogenase ABD1_29380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_29380 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_29380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_29390 PF00743 Flavin-binding monooxygenase-like ABD1_29400 PF01196 Ribosomal protein L17 ABD1_29410 PF01000 RNA polymerase Rpb3/RpoA insert domain ABD1_29410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABD1_29410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABD1_29420 PF01479 S4 domain ABD1_29420 PF00163 Ribosomal protein S4/S9 N-terminal domain ABD1_29430 PF00411 Ribosomal protein S11 ABD1_29440 PF00416 Ribosomal protein S13/S18 ABD1_29450 PF00444 Ribosomal protein L36 ABD1_29460 PF00344 SecY translocase ABD1_29470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABD1_29480 PF00327 Ribosomal protein L30p/L7e ABD1_29490 PF03719 Ribosomal protein S5, C-terminal domain ABD1_29490 PF00333 Ribosomal protein S5, N-terminal domain ABD1_29500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABD1_29510 PF00347 Ribosomal protein L6 ABD1_29520 PF00410 Ribosomal protein S8 ABD1_29530 PF00253 Ribosomal protein S14p/S29e ABD1_29540 PF00281 Ribosomal protein L5 ABD1_29540 PF00673 ribosomal L5P family C-terminus ABD1_29550 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABD1_29550 PF00467 KOW motif ABD1_29560 PF00238 Ribosomal protein L14p/L23e ABD1_29570 PF00366 Ribosomal protein S17 ABD1_29580 PF00831 Ribosomal L29 protein ABD1_29590 PF00252 Ribosomal protein L16p/L10e ABD1_29600 PF07650 KH domain ABD1_29600 PF00189 Ribosomal protein S3, C-terminal domain ABD1_29610 PF00237 Ribosomal protein L22p/L17e ABD1_29620 PF00203 Ribosomal protein S19 ABD1_29630 PF03947 Ribosomal Proteins L2, C-terminal domain ABD1_29630 PF00181 Ribosomal Proteins L2, RNA binding domain ABD1_29640 PF00276 Ribosomal protein L23 ABD1_29650 PF00573 Ribosomal protein L4/L1 family ABD1_29660 PF00297 Ribosomal protein L3 ABD1_29670 PF00338 Ribosomal protein S10p/S20e ABD1_29680 PF00117 Glutamine amidotransferase class-I ABD1_29690 PF01053 Cys/Met metabolism PLP-dependent enzyme ABD1_29700 PF05872 Bacterial protein of unknown function (DUF853) ABD1_29710 PF00970 Oxidoreductase FAD-binding domain ABD1_29710 PF00042 Globin ABD1_29710 PF00175 Oxidoreductase NAD-binding domain ABD1_29720 PF02082 Transcriptional regulator ABD1_29730 PF01926 50S ribosome-binding GTPase ABD1_29750 PF00375 Sodium:dicarboxylate symporter family ABD1_29770 PF01553 Acyltransferase ABD1_29800 PF00270 DEAD/DEAH box helicase ABD1_29800 PF00271 Helicase conserved C-terminal domain ABD1_29800 PF17191 RecG wedge domain ABD1_29810 PF00156 Phosphoribosyl transferase domain ABD1_29820 PF00293 NUDIX domain ABD1_29830 PF03641 Possible lysine decarboxylase ABD1_29840 PF01544 CorA-like Mg2+ transporter protein ABD1_29860 PF05494 MlaC protein ABD1_29880 PF02405 Permease MlaE ABD1_29890 PF00005 ABC transporter ABD1_29910 PF12343 Cold shock protein DEAD box A ABD1_29910 PF00270 DEAD/DEAH box helicase ABD1_29910 PF00271 Helicase conserved C-terminal domain ABD1_29910 PF03880 DbpA RNA binding domain ABD1_29920 PF00459 Inositol monophosphatase family ABD1_29930 PF02780 Transketolase, C-terminal domain ABD1_29930 PF02779 Transketolase, pyrimidine binding domain ABD1_29930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABD1_29940 PF00925 GTP cyclohydrolase II ABD1_29950 PF01218 Coproporphyrinogen III oxidase ABD1_29960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABD1_29960 PF01488 Shikimate / quinate 5-dehydrogenase ABD1_29960 PF08501 Shikimate dehydrogenase substrate binding domain ABD1_29980 PF02770 Acyl-CoA dehydrogenase, middle domain ABD1_29980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABD1_29980 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABD1_29980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABD1_30000 PF04024 PspC domain ABD1_30010 PF00571 CBS domain ABD1_30040 PF07690 Major Facilitator Superfamily ABD1_30050 PF02091 Glycyl-tRNA synthetase alpha subunit ABD1_30060 PF02092 Glycyl-tRNA synthetase beta subunit ABD1_30060 PF05746 DALR anticodon binding domain ABD1_30090 PF00892 EamA-like transporter family ABD1_30100 PF03466 LysR substrate binding domain ABD1_30100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_30160 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABD1_30170 PF04996 Succinylarginine dihydrolase ABD1_30180 PF00171 Aldehyde dehydrogenase family ABD1_30190 PF04958 Arginine N-succinyltransferase beta subunit ABD1_30200 PF00202 Aminotransferase class-III ABD1_30210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABD1_30210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_30220 PF00324 Amino acid permease ABD1_30240 PF08241 Methyltransferase domain ABD1_30290 PF01594 AI-2E family transporter ABD1_30300 PF00080 Copper/zinc superoxide dismutase (SODC) ABD1_30310 PF12805 FUSC-like inner membrane protein yccS ABD1_30320 PF07690 Major Facilitator Superfamily ABD1_30340 PF02525 Flavodoxin-like fold ABD1_30350 PF03992 Antibiotic biosynthesis monooxygenase ABD1_30370 PF01565 FAD binding domain ABD1_30370 PF02913 FAD linked oxidases, C-terminal domain ABD1_30380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABD1_30380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABD1_30390 PF00892 EamA-like transporter family ABD1_30400 PF00892 EamA-like transporter family ABD1_30420 PF01925 Sulfite exporter TauE/SafE ABD1_30430 PF09157 Pseudouridine synthase II TruB, C-terminal ABD1_30430 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABD1_30430 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABD1_30440 PF03280 Proteobacterial lipase chaperone protein ABD1_30450 PF00561 alpha/beta hydrolase fold ABD1_30460 PF01245 Ribosomal protein L19 ABD1_30470 PF01746 tRNA (Guanine-1)-methyltransferase ABD1_30480 PF01782 RimM N-terminal domain ABD1_30480 PF05239 PRC-barrel domain ABD1_30490 PF00886 Ribosomal protein S16 ABD1_30570 PF02401 LytB protein ABD1_30580 PF00625 Guanylate kinase ABD1_30590 PF01192 RNA polymerase Rpb6 ABD1_30600 PF13291 ACT domain ABD1_30600 PF04607 Region found in RelA / SpoT proteins ABD1_30600 PF02824 TGS domain ABD1_30610 PF01042 Endoribonuclease L-PSP ABD1_30620 PF04324 BFD-like [2Fe-2S] binding domain ABD1_30630 PF00210 Ferritin-like domain ABD1_30640 PF15864 Protein glycosylation ligase ABD1_30640 PF04932 O-Antigen ligase ABD1_30640 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABD1_30660 PF07963 Prokaryotic N-terminal methylation motif ABD1_30660 PF00114 Pilin (bacterial filament) ABD1_30680 PF04536 TPM domain ABD1_30690 PF04011 LemA family ABD1_30710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABD1_30710 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABD1_30720 PF01645 Conserved region in glutamate synthase ABD1_30720 PF04898 Glutamate synthase central domain ABD1_30720 PF00310 Glutamine amidotransferases class-II ABD1_30720 PF01493 GXGXG motif ABD1_30740 PF01761 3-dehydroquinate synthase ABD1_30750 PF01202 Shikimate kinase ABD1_30760 PF00263 Bacterial type II and III secretion system protein ABD1_30760 PF03958 Bacterial type II/III secretion system short domain ABD1_30760 PF07660 Secretin and TonB N terminus short domain ABD1_30760 PF11741 AMIN domain ABD1_30810 PF00905 Penicillin binding protein transpeptidase domain ABD1_30810 PF00912 Transglycosylase ABD1_30810 PF17092 Penicillin-binding protein OB-like domain ABD1_30820 PF13847 Methyltransferase domain ABD1_30840 PF00953 Glycosyl transferase family 4 ABD1_30850 PF01225 Mur ligase family, catalytic domain ABD1_30850 PF08245 Mur ligase middle domain ABD1_30850 PF02875 Mur ligase family, glutamate ligase domain ABD1_30860 PF01225 Mur ligase family, catalytic domain ABD1_30860 PF08245 Mur ligase middle domain ABD1_30860 PF02875 Mur ligase family, glutamate ligase domain ABD1_30870 PF03717 Penicillin-binding Protein dimerisation domain ABD1_30870 PF00905 Penicillin binding protein transpeptidase domain ABD1_30890 PF01795 MraW methylase family ABD1_30920 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABD1_30930 PF00324 Amino acid permease ABD1_30970 PF01545 Cation efflux family ABD1_30980 PF00873 AcrB/AcrD/AcrF family ABD1_30990 PF00529 HlyD membrane-fusion protein of T1SS ABD1_30990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_31040 PF12848 ABC transporter ABD1_31040 PF00005 ABC transporter ABD1_31050 PF01053 Cys/Met metabolism PLP-dependent enzyme ABD1_31060 PF00106 short chain dehydrogenase ABD1_31070 PF00916 Sulfate permease family ABD1_31070 PF01740 STAS domain ABD1_31080 PF17674 HHH domain ABD1_31080 PF00575 S1 RNA binding domain ABD1_31080 PF09371 Tex-like protein N-terminal domain ABD1_31080 PF16921 Tex protein YqgF-like domain ABD1_31090 PF00486 Transcriptional regulatory protein, C terminal ABD1_31090 PF00072 Response regulator receiver domain ABD1_31100 PF00512 His Kinase A (phospho-acceptor) domain ABD1_31100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_31100 PF00672 HAMP domain ABD1_31110 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABD1_31110 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABD1_31120 PF00583 Acetyltransferase (GNAT) family ABD1_31140 PF00475 Imidazoleglycerol-phosphate dehydratase ABD1_31150 PF00117 Glutamine amidotransferase class-I ABD1_31180 PF00977 Histidine biosynthesis protein ABD1_31230 PF01636 Phosphotransferase enzyme family ABD1_31240 PF00977 Histidine biosynthesis protein ABD1_31270 PF00230 Major intrinsic protein ABD1_31320 PF02705 K+ potassium transporter ABD1_31330 PF12833 Helix-turn-helix domain ABD1_31380 PF02525 Flavodoxin-like fold ABD1_31390 PF01638 HxlR-like helix-turn-helix ABD1_31420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABD1_31430 PF01638 HxlR-like helix-turn-helix ABD1_31470 PF12833 Helix-turn-helix domain ABD1_31470 PF02311 AraC-like ligand binding domain ABD1_31480 PF00248 Aldo/keto reductase family ABD1_31570 PF00440 Bacterial regulatory proteins, tetR family ABD1_31580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_31580 PF00529 HlyD membrane-fusion protein of T1SS ABD1_31600 PF03466 LysR substrate binding domain ABD1_31600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_31610 PF07690 Major Facilitator Superfamily ABD1_31640 PF12102 Domain of unknown function (DUF3578) ABD1_31640 PF07728 AAA domain (dynein-related subfamily) ABD1_31710 PF01593 Flavin containing amine oxidoreductase ABD1_31720 PF02678 Pirin ABD1_31720 PF05726 Pirin C-terminal cupin domain ABD1_31730 PF00857 Isochorismatase family ABD1_31740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_31750 PF00171 Aldehyde dehydrogenase family ABD1_31760 PF00202 Aminotransferase class-III ABD1_31770 PF00155 Aminotransferase class I and II ABD1_31770 PF00392 Bacterial regulatory proteins, gntR family ABD1_31780 PF00324 Amino acid permease ABD1_31800 PF03591 AzlC protein ABD1_31820 PF00436 Single-strand binding protein family ABD1_31830 PF07690 Major Facilitator Superfamily ABD1_31850 PF02581 Thiamine monophosphate synthase ABD1_31850 PF08543 Phosphomethylpyrimidine kinase ABD1_31850 PF03070 TENA/THI-4/PQQC family ABD1_31860 PF06942 GlpM protein ABD1_31880 PF00107 Zinc-binding dehydrogenase ABD1_31880 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_31890 PF16925 Tetracyclin repressor-like, C-terminal domain ABD1_31890 PF00440 Bacterial regulatory proteins, tetR family ABD1_31900 PF00005 ABC transporter ABD1_31900 PF17760 UvrA interaction domain ABD1_31900 PF17755 UvrA DNA-binding domain ABD1_31910 PF00990 Diguanylate cyclase, GGDEF domain ABD1_31910 PF17158 Membrane-associated sensor, integral membrane domain ABD1_31930 PF02028 BCCT, betaine/carnitine/choline family transporter ABD1_31950 PF00474 Sodium:solute symporter family ABD1_31960 PF04341 Protein of unknown function, DUF485 ABD1_31970 PF00672 HAMP domain ABD1_31970 PF00072 Response regulator receiver domain ABD1_31970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_31970 PF01627 Hpt domain ABD1_31970 PF00512 His Kinase A (phospho-acceptor) domain ABD1_31990 PF00196 Bacterial regulatory proteins, luxR family ABD1_31990 PF00072 Response regulator receiver domain ABD1_32000 PF03358 NADPH-dependent FMN reductase ABD1_32010 PF00296 Luciferase-like monooxygenase ABD1_32020 PF01037 Lrp/AsnC ligand binding domain ABD1_32030 PF00857 Isochorismatase family ABD1_32040 PF13193 AMP-binding enzyme C-terminal domain ABD1_32040 PF00501 AMP-binding enzyme ABD1_32040 PF16177 Acetyl-coenzyme A synthetase N-terminus ABD1_32060 PF00924 Mechanosensitive ion channel ABD1_32070 PF04452 RNA methyltransferase ABD1_32080 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABD1_32090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABD1_32110 PF03462 PCRF domain ABD1_32110 PF00472 RF-1 domain ABD1_32130 PF01368 DHH family ABD1_32130 PF02272 DHHA1 domain ABD1_32130 PF17768 RecJ OB domain ABD1_32140 PF01243 Pyridoxamine 5'-phosphate oxidase ABD1_32140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABD1_32150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABD1_32150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABD1_32150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABD1_32150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABD1_32160 PF00478 IMP dehydrogenase / GMP reductase domain ABD1_32160 PF00571 CBS domain ABD1_32170 PF03692 Putative zinc- or iron-chelating domain ABD1_32180 PF01613 Flavin reductase like domain ABD1_32180 PF00258 Flavodoxin ABD1_32190 PF07715 TonB-dependent Receptor Plug Domain ABD1_32190 PF00593 TonB dependent receptor ABD1_32200 PF01169 Uncharacterized protein family UPF0016 ABD1_32220 PF02817 e3 binding domain ABD1_32220 PF00364 Biotin-requiring enzyme ABD1_32220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABD1_32230 PF17831 Pyruvate dehydrogenase E1 component middle domain ABD1_32230 PF00456 Transketolase, thiamine diphosphate binding domain ABD1_32240 PF01551 Peptidase family M23 ABD1_32260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABD1_32270 PF12327 FtsZ family, C-terminal domain ABD1_32270 PF00091 Tubulin/FtsZ family, GTPase domain ABD1_32280 PF02491 SHS2 domain inserted in FTSA ABD1_32290 PF03799 Cell division protein FtsQ ABD1_32290 PF08478 POTRA domain, FtsQ-type ABD1_32300 PF07478 D-ala D-ala ligase C-terminus ABD1_32300 PF01820 D-ala D-ala ligase N-terminus ABD1_32310 PF08245 Mur ligase middle domain ABD1_32310 PF02875 Mur ligase family, glutamate ligase domain ABD1_32310 PF01225 Mur ligase family, catalytic domain ABD1_32320 PF03033 Glycosyltransferase family 28 N-terminal domain ABD1_32320 PF04101 Glycosyltransferase family 28 C-terminal domain ABD1_32330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABD1_32330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABD1_32350 PF07715 TonB-dependent Receptor Plug Domain ABD1_32350 PF00593 TonB dependent receptor ABD1_32370 PF00156 Phosphoribosyl transferase domain ABD1_32380 PF03372 Endonuclease/Exonuclease/phosphatase family ABD1_32390 PF03960 ArsC family ABD1_32410 PF07859 alpha/beta hydrolase fold ABD1_32420 PF00990 Diguanylate cyclase, GGDEF domain ABD1_32420 PF07694 5TMR of 5TMR-LYT ABD1_32430 PF11412 Disulphide bond corrector protein DsbC ABD1_32430 PF02683 Cytochrome C biogenesis protein transmembrane region ABD1_32490 PF00576 HIUase/Transthyretin family ABD1_32500 PF00860 Permease family ABD1_32520 PF01494 FAD binding domain ABD1_32530 PF03561 Allantoicase repeat ABD1_32540 PF04115 Ureidoglycolate lyase ABD1_32570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_32570 PF00986 DNA gyrase B subunit, carboxyl terminus ABD1_32570 PF00204 DNA gyrase B ABD1_32570 PF01751 Toprim domain ABD1_32580 PF05728 Uncharacterised protein family (UPF0227) ABD1_32660 PF00182 Chitinase class I ABD1_32670 PF04717 Type VI secretion system, phage-baseplate injector ABD1_32680 PF02600 Disulfide bond formation protein DsbB ABD1_32690 PF04262 Glutamate-cysteine ligase ABD1_32720 PF04286 Protein of unknown function (DUF445) ABD1_32730 PF00155 Aminotransferase class I and II ABD1_32740 PF01554 MatE ABD1_32750 PF00106 short chain dehydrogenase ABD1_32770 PF00072 Response regulator receiver domain ABD1_32770 PF00486 Transcriptional regulatory protein, C terminal ABD1_32780 PF11808 Phosphate regulon sensor protein PhoR ABD1_32780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABD1_32780 PF00989 PAS fold ABD1_32780 PF00512 His Kinase A (phospho-acceptor) domain ABD1_32800 PF02666 Phosphatidylserine decarboxylase ABD1_32810 PF00581 Rhodanese-like domain ABD1_32820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABD1_32820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABD1_32840 PF00199 Catalase ABD1_32840 PF06628 Catalase-related immune-responsive ABD1_32850 PF02580 D-Tyr-tRNA(Tyr) deacylase ABD1_32900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABD1_32900 PF00925 GTP cyclohydrolase II ABD1_32910 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABD1_32920 PF01029 NusB family ABD1_32930 PF00586 AIR synthase related protein, N-terminal domain ABD1_32930 PF02769 AIR synthase related protein, C-terminal domain ABD1_32950 PF04608 Phosphatidylglycerophosphatase A ABD1_32960 PF00132 Bacterial transferase hexapeptide (six repeats) ABD1_32960 PF14602 Hexapeptide repeat of succinyl-transferase ABD1_32960 PF12804 MobA-like NTP transferase domain ABD1_32970 PF01380 SIS domain ABD1_33000 PF01810 LysE type translocator ABD1_33010 PF01177 Asp/Glu/Hydantoin racemase ABD1_33020 PF13419 Haloacid dehalogenase-like hydrolase ABD1_33040 PF00491 Arginase family ABD1_33050 PF01979 Amidohydrolase family ABD1_33060 PF00324 Amino acid permease ABD1_33070 PF00221 Aromatic amino acid lyase ABD1_33080 PF17391 Urocanase N-terminal domain ABD1_33080 PF17392 Urocanase C-terminal domain ABD1_33080 PF01175 Urocanase Rossmann-like domain ABD1_33090 PF05962 HutD ABD1_33100 PF07702 UTRA domain ABD1_33100 PF00392 Bacterial regulatory proteins, gntR family ABD1_33120 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABD1_33120 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABD1_33140 PF00324 Amino acid permease ABD1_33160 PF14497 Glutathione S-transferase, C-terminal domain ABD1_33160 PF02798 Glutathione S-transferase, N-terminal domain ABD1_33170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABD1_33190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABD1_33200 PF04463 Protein of unknown function (DUF523) ABD1_33210 PF01554 MatE ABD1_33220 PF01758 Sodium Bile acid symporter family ABD1_33230 PF00857 Isochorismatase family ABD1_33240 PF00701 Dihydrodipicolinate synthetase family ABD1_33260 PF01259 SAICAR synthetase ABD1_33280 PF01226 Formate/nitrite transporter ABD1_33290 PF12002 MgsA AAA+ ATPase C terminal ABD1_33290 PF16193 AAA C-terminal domain ABD1_33290 PF00004 ATPase family associated with various cellular activities (AAA) ABD1_33300 PF07995 Glucose / Sorbosone dehydrogenase ABD1_33310 PF03692 Putative zinc- or iron-chelating domain ABD1_33320 PF07043 Protein of unknown function (DUF1328) ABD1_33350 PF10576 Iron-sulfur binding domain of endonuclease III ABD1_33350 PF00633 Helix-hairpin-helix motif ABD1_33350 PF00730 HhH-GPD superfamily base excision DNA repair protein ABD1_33350 PF14815 NUDIX domain ABD1_33380 PF03352 Methyladenine glycosylase ABD1_33390 PF00107 Zinc-binding dehydrogenase ABD1_33390 PF08240 Alcohol dehydrogenase GroES-like domain ABD1_33400 PF00155 Aminotransferase class I and II ABD1_33400 PF00392 Bacterial regulatory proteins, gntR family ABD1_33420 PF03466 LysR substrate binding domain ABD1_33420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_33430 PF00248 Aldo/keto reductase family ABD1_33440 PF07690 Major Facilitator Superfamily ABD1_33460 PF01113 Dihydrodipicolinate reductase, N-terminus ABD1_33460 PF05173 Dihydrodipicolinate reductase, C-terminus ABD1_33480 PF00684 DnaJ central domain ABD1_33480 PF00226 DnaJ domain ABD1_33480 PF01556 DnaJ C terminal domain ABD1_33500 PF00873 AcrB/AcrD/AcrF family ABD1_33510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABD1_33520 PF08361 MAATS-type transcriptional repressor, C-terminal region ABD1_33520 PF00440 Bacterial regulatory proteins, tetR family ABD1_33530 PF00311 Phosphoenolpyruvate carboxylase ABD1_33540 PF00860 Permease family ABD1_33550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_33550 PF03466 LysR substrate binding domain ABD1_33580 PF00920 Dehydratase family ABD1_33590 PF00551 Formyl transferase ABD1_33590 PF02911 Formyl transferase, C-terminal domain ABD1_33600 PF01189 16S rRNA methyltransferase RsmB/F ABD1_33600 PF01029 NusB family ABD1_33620 PF00209 Sodium:neurotransmitter symporter family ABD1_33660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABD1_33670 PF07859 alpha/beta hydrolase fold ABD1_33710 PF03466 LysR substrate binding domain ABD1_33710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABD1_33720 PF01025 GrpE ABD1_33730 PF00012 Hsp70 protein ABD1_33770 PF13406 Transglycosylase SLT domain ABD1_33780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABD1_33780 PF02222 ATP-grasp domain ABD1_33790 PF00731 AIR carboxylase ABD1_33810 PF01225 Mur ligase family, catalytic domain ABD1_33810 PF02875 Mur ligase family, glutamate ligase domain ABD1_33810 PF08245 Mur ligase middle domain ABD1_33830 PF01569 PAP2 superfamily ABD1_33840 PF03741 Integral membrane protein TerC family ABD1_33860 PF03738 Glutathionylspermidine synthase preATP-grasp ABD1_33870 PF00355 Rieske [2Fe-2S] domain ABD1_33880 PF01979 Amidohydrolase family ABD1_33900 PF00156 Phosphoribosyl transferase domain ABD1_33920 PF13098 Thioredoxin-like domain ABD1_33920 PF10411 Disulfide bond isomerase protein N-terminus ABD1_33930 PF01545 Cation efflux family ABD1_33930 PF16916 Dimerisation domain of Zinc Transporter ABD1_33940 PF02583 Metal-sensitive transcriptional repressor ABD1_33950 PF01926 50S ribosome-binding GTPase ABD1_33950 PF10396 GTP-binding protein TrmE N-terminus ABD1_33950 PF12631 MnmE helical domain ABD1_33960 PF14849 YidC periplasmic domain ABD1_33960 PF02096 60Kd inner membrane protein ABD1_33970 PF01809 Putative membrane protein insertion efficiency factor ABD1_33980 PF00825 Ribonuclease P ABD1_33990 PF00468 Ribosomal protein L34 ABD1_p00010 PF01051 Initiator Replication protein ABD1_p00040 PF05973 Phage derived protein Gp49-like (DUF891)