ABD1_00010 SM00382 ATPases associated with a variety of cellular activities ABD1_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain ABD1_00020 SM00480 DNA polymerase III beta subunit ABD1_00040 SM00387 Histidine kinase-like ATPases ABD1_00040 SM00433 TopoisomeraseII ABD1_00070 SM00382 ATPases associated with a variety of cellular activities ABD1_00150 SM00248 ankyrin repeats ABD1_00200 SM00904 Riboflavin kinase ABD1_00240 SM00382 ATPases associated with a variety of cellular activities ABD1_00270 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_00280 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_00450 SM00644 ABD1_00450 ABD1_00500 SM00226 Low molecular weight phosphatase family ABD1_00520 SM00984 UDP binding domain ABD1_00660 SM00984 UDP binding domain ABD1_00710 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_00710 SM00895 ABD1_00710 ABD1_00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_00750 SM00895 ABD1_00750 ABD1_00830 SM00671 Sel1-like repeats. ABD1_00960 SM00344 helix_turn_helix ASNC type ABD1_00980 SM01005 Alanine racemase, C-terminal domain ABD1_01170 SM00421 helix_turn_helix, Lux Regulon ABD1_01200 SM00823 Phosphopantetheine attachment site ABD1_01200 SM01294 ABD1_01200 ABD1_01210 SM00823 Phosphopantetheine attachment site ABD1_01210 SM00824 Thioesterase ABD1_01420 SM00836 DALR anticodon binding domain ABD1_01420 SM01016 Arginyl tRNA synthetase N terminal dom ABD1_01430 SM00919 Malic enzyme, NAD binding domain ABD1_01430 SM01274 ABD1_01430 ABD1_01470 SM00382 ATPases associated with a variety of cellular activities ABD1_01570 SM00382 ATPases associated with a variety of cellular activities ABD1_01610 SM00342 helix_turn_helix, arabinose operon control protein ABD1_01790 SM00422 helix_turn_helix, mercury resistance ABD1_01810 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_01850 SM00641 Glycosyl hydrolases family 25 ABD1_01880 SM01091 Transporter associated domain ABD1_01920 SM00434 DNA Topoisomerase IV ABD1_01990 SM01130 ABD1_01990 ABD1_02000 SM01007 Class II Aldolase and Adducin N-terminal domain ABD1_02010 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_02020 SM00382 ATPases associated with a variety of cellular activities ABD1_02040 SM00938 Nitrogen regulatory protein P-II ABD1_02170 SM00245 tail specific protease ABD1_02180 SM00382 ATPases associated with a variety of cellular activities ABD1_02180 SM00448 cheY-homologous receiver domain ABD1_02190 SM00387 Histidine kinase-like ATPases ABD1_02190 SM00388 His Kinase A (phosphoacceptor) domain ABD1_02200 SM00421 helix_turn_helix, Lux Regulon ABD1_02200 SM00448 cheY-homologous receiver domain ABD1_02260 SM00899 ABD1_02260 ABD1_02440 SM00448 cheY-homologous receiver domain ABD1_02440 SM00850 LytTr DNA-binding domain ABD1_02500 SM00528 Domain in histone-like proteins of HNS family ABD1_02520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABD1_02540 SM00240 Forkhead associated domain ABD1_02590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABD1_02590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABD1_02600 SM00649 Ribosomal protein L11/L12 ABD1_02650 SM00663 RNA polymerase I subunit A N-terminus ABD1_02730 SM00387 Histidine kinase-like ATPases ABD1_02780 SM00422 helix_turn_helix, mercury resistance ABD1_02870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABD1_02870 SM00465 GIY-YIG type nucleases (URI domain) ABD1_02900 SM00342 helix_turn_helix, arabinose operon control protein ABD1_02920 SM00346 helix_turn_helix isocitrate lyase regulation ABD1_02950 SM00732 Likely ribonuclease with RNase H fold. ABD1_02980 SM00028 Tetratricopeptide repeats ABD1_03000 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABD1_03090 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_03300 SM00382 ATPases associated with a variety of cellular activities ABD1_03320 SM01387 ABD1_03320 ABD1_03330 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_03330 SM00322 K homology RNA-binding domain ABD1_03360 SM00271 DnaJ molecular chaperone homology domain ABD1_03400 SM00487 DEAD-like helicases superfamily ABD1_03400 SM00490 helicase superfamily c-terminal domain ABD1_03460 SM00116 Domain in cystathionine beta-synthase and other proteins. ABD1_03460 SM01091 Transporter associated domain ABD1_03540 SM00849 Metallo-beta-lactamase superfamily ABD1_03670 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_03710 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_03730 SM00363 S4 RNA-binding domain ABD1_03820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABD1_03900 SM01329 ABD1_03900 ABD1_03920 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_03930 SM00342 helix_turn_helix, arabinose operon control protein ABD1_03950 SM00870 ABD1_03950 ABD1_03980 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABD1_04040 SM00382 ATPases associated with a variety of cellular activities ABD1_04060 SM00829 Enoylreductase ABD1_04090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABD1_04090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABD1_04090 SM00493 ABD1_04090 ABD1_04130 SM00360 RNA recognition motif ABD1_04420 SM00671 Sel1-like repeats. ABD1_04450 SM00917 LeuA allosteric (dimerisation) domain ABD1_04460 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABD1_04500 SM00382 ATPases associated with a variety of cellular activities ABD1_04500 SM00994 ClpX C4-type zinc finger ABD1_04500 SM01086 C-terminal, D2-small domain, of ClpB protein ABD1_04650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABD1_04650 SM00245 tail specific protease ABD1_04670 SM00014 Acid phosphatase homologues ABD1_04690 SM00562 ABD1_04690 ABD1_04710 SM00028 Tetratricopeptide repeats ABD1_04760 SM00564 beta-propeller repeat ABD1_04790 SM00563 Phosphate acyltransferases ABD1_04920 SM00825 Beta-ketoacyl synthase ABD1_04940 SM00822 ABD1_04940 ABD1_04950 SM00825 Beta-ketoacyl synthase ABD1_05000 SM00450 Rhodanese Homology Domain ABD1_05020 SM00479 ABD1_05020 ABD1_05060 SM00382 ATPases associated with a variety of cellular activities ABD1_05150 SM00052 Putative diguanylate phosphodiesterase ABD1_05150 SM00267 diguanylate cyclase ABD1_05380 SM00344 helix_turn_helix ASNC type ABD1_05410 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_05470 SM01007 Class II Aldolase and Adducin N-terminal domain ABD1_05690 SM00487 DEAD-like helicases superfamily ABD1_05730 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ABD1_05730 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ABD1_05810 SM00073 Histidine Phosphotransfer domain ABD1_05810 SM00387 Histidine kinase-like ATPases ABD1_05810 SM00388 His Kinase A (phosphoacceptor) domain ABD1_05810 SM00448 cheY-homologous receiver domain ABD1_05850 SM00954 Region found in RelA / SpoT proteins ABD1_05880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABD1_05970 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABD1_06080 SM00873 B3/4 domain ABD1_06080 SM00874 tRNA synthetase B5 domain ABD1_06080 SM00896 Ferredoxin-fold anticodon binding domain ABD1_06090 SM00411 bacterial (prokaryotic) histone like domain ABD1_06110 SM00357 Cold shock protein domain ABD1_06110 SM00382 ATPases associated with a variety of cellular activities ABD1_06110 SM00959 Rho termination factor, N-terminal domain ABD1_06150 SM00977 TilS substrate C-terminal domain ABD1_06180 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABD1_06180 SM00474 3'-5' exonuclease ABD1_06180 SM00475 5'-3' exonuclease ABD1_06180 SM00482 DNA polymerase A domain ABD1_06220 SM00382 ATPases associated with a variety of cellular activities ABD1_06240 SM00347 helix_turn_helix multiple antibiotic resistance protein ABD1_06280 SM00331 Sigma factor PP2C-like phosphatases ABD1_06800 SM00342 helix_turn_helix, arabinose operon control protein ABD1_06840 SM00903 Flavin reductase like domain ABD1_07000 SM00448 cheY-homologous receiver domain ABD1_07000 SM00862 Transcriptional regulatory protein, C terminal ABD1_07010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABD1_07010 SM00387 Histidine kinase-like ATPases ABD1_07010 SM00388 His Kinase A (phosphoacceptor) domain ABD1_07030 SM00267 diguanylate cyclase ABD1_07080 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABD1_07090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABD1_07090 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABD1_07180 SM00357 Cold shock protein domain ABD1_07490 SM00382 ATPases associated with a variety of cellular activities ABD1_07490 SM00962 SRP54-type protein, GTPase domain ABD1_07490 SM00963 SRP54-type protein, helical bundle domain ABD1_07530 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_07550 SM00771 ZipA, C-terminal domain (FtsZ-binding) ABD1_07560 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABD1_07560 SM00292 breast cancer carboxy-terminal domain ABD1_07560 SM00532 Ligase N family ABD1_07660 SM00363 S4 RNA-binding domain ABD1_07730 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABD1_07740 SM00822 ABD1_07740 ABD1_07760 SM00257 Lysin motif ABD1_07850 SM01400 ABD1_07850 ABD1_07870 SM00028 Tetratricopeptide repeats ABD1_07890 SM00400 zinc finger ABD1_07890 SM00493 ABD1_07890 ABD1_07910 SM00363 S4 RNA-binding domain ABD1_07990 SM01329 ABD1_07990 ABD1_08100 SM00825 Beta-ketoacyl synthase ABD1_08140 SM00838 Elongation factor G C-terminus ABD1_08140 SM00889 Elongation factor G, domain IV ABD1_08220 SM00843 ABD1_08220 ABD1_08290 SM00563 Phosphate acyltransferases ABD1_08430 SM00382 ATPases associated with a variety of cellular activities ABD1_08520 SM01004 Delta-aminolevulinic acid dehydratase ABD1_08680 SM01130 ABD1_08680 ABD1_08890 SM01322 ABD1_08890 ABD1_08970 SM00346 helix_turn_helix isocitrate lyase regulation ABD1_09160 SM00342 helix_turn_helix, arabinose operon control protein ABD1_09210 SM00822 ABD1_09210 ABD1_09240 SM00861 Transketolase, pyrimidine binding domain ABD1_09250 SM01018 B12 binding domain ABD1_09370 SM00947 Carbonic anhydrase ABD1_09390 SM00382 ATPases associated with a variety of cellular activities ABD1_09600 SM01091 Transporter associated domain ABD1_09700 SM00988 UreE urease accessory protein, N-terminal domain ABD1_09800 SM00478 endonuclease III ABD1_09820 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_09860 SM00382 ATPases associated with a variety of cellular activities ABD1_09860 SM00464 Found in ATP-dependent protease La (LON) ABD1_10020 SM00530 Helix-turn-helix XRE-family like proteins ABD1_10370 SM00530 Helix-turn-helix XRE-family like proteins ABD1_10570 SM01011 Aminopeptidase P, N-terminal domain ABD1_10620 SM00422 helix_turn_helix, mercury resistance ABD1_10730 SM00479 ABD1_10730 ABD1_10740 SM00257 Lysin motif ABD1_10780 SM00382 ATPases associated with a variety of cellular activities ABD1_10810 SM00479 ABD1_10810 ABD1_10830 SM00267 diguanylate cyclase ABD1_11000 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_11000 SM00895 ABD1_11000 ABD1_11030 SM00344 helix_turn_helix ASNC type ABD1_11230 SM00382 ATPases associated with a variety of cellular activities ABD1_11380 SM00507 HNH nucleases ABD1_11860 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABD1_11870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABD1_11890 SM00788 Adenylosuccinate synthetase ABD1_11920 SM00100 Cyclic nucleotide-monophosphate binding domain ABD1_11920 SM00419 helix_turn_helix, cAMP Regulatory protein ABD1_11970 SM00382 ATPases associated with a variety of cellular activities ABD1_11970 SM01086 C-terminal, D2-small domain, of ClpB protein ABD1_12000 SM00981 ABD1_12000 ABD1_12160 SM00382 ATPases associated with a variety of cellular activities ABD1_12160 SM00487 DEAD-like helicases superfamily ABD1_12160 SM00490 helicase superfamily c-terminal domain ABD1_12160 SM00847 Helicase associated domain (HA2) Add an annotation ABD1_12280 SM00422 helix_turn_helix, mercury resistance ABD1_12370 SM00530 Helix-turn-helix XRE-family like proteins ABD1_12410 SM00357 Cold shock protein domain ABD1_12580 SM00840 ABD1_12580 ABD1_12590 SM00116 Domain in cystathionine beta-synthase and other proteins. ABD1_12630 SM00382 ATPases associated with a variety of cellular activities ABD1_12650 SM00382 ATPases associated with a variety of cellular activities ABD1_12740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABD1_12740 SM00534 ATPase domain of DNA mismatch repair MUTS family ABD1_12770 SM00052 Putative diguanylate phosphodiesterase ABD1_12820 SM00422 helix_turn_helix, mercury resistance ABD1_12940 SM00796 Allophanate hydrolase subunit 1 ABD1_12940 SM00797 Allophanate hydrolase subunit 2 ABD1_12950 SM00878 Biotin carboxylase C-terminal domain ABD1_12970 SM00671 Sel1-like repeats. ABD1_13020 SM00829 Enoylreductase ABD1_13050 SM00796 Allophanate hydrolase subunit 1 ABD1_13050 SM00797 Allophanate hydrolase subunit 2 ABD1_13050 SM00878 Biotin carboxylase C-terminal domain ABD1_13130 SM00382 ATPases associated with a variety of cellular activities ABD1_13240 SM00248 ankyrin repeats ABD1_13300 SM00422 helix_turn_helix, mercury resistance ABD1_13320 SM01130 ABD1_13320 ABD1_13340 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_13340 SM00895 ABD1_13340 ABD1_13390 SM00342 helix_turn_helix, arabinose operon control protein ABD1_13610 SM00671 Sel1-like repeats. ABD1_13620 SM00855 Phosphoglycerate mutase family ABD1_13700 SM00878 Biotin carboxylase C-terminal domain ABD1_13860 SM01236 ABD1_13860 ABD1_13870 SM01060 ABD1_13870 ABD1_13930 SM00344 helix_turn_helix ASNC type ABD1_13950 SM00387 Histidine kinase-like ATPases ABD1_13950 SM00388 His Kinase A (phosphoacceptor) domain ABD1_13950 SM00448 cheY-homologous receiver domain ABD1_13960 SM00421 helix_turn_helix, Lux Regulon ABD1_13960 SM00448 cheY-homologous receiver domain ABD1_14010 SM00382 ATPases associated with a variety of cellular activities ABD1_14020 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_14030 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_14100 SM00450 Rhodanese Homology Domain ABD1_14110 SM00822 ABD1_14110 ABD1_14180 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_14280 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABD1_14320 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_14420 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_14430 SM00382 ATPases associated with a variety of cellular activities ABD1_14480 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_14480 SM00895 ABD1_14480 ABD1_14540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABD1_14630 SM00481 DNA polymerase alpha chain like domain ABD1_14640 SM00870 ABD1_14640 ABD1_14690 SM00342 helix_turn_helix, arabinose operon control protein ABD1_14720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABD1_14790 SM00100 Cyclic nucleotide-monophosphate binding domain ABD1_14790 SM00419 helix_turn_helix, cAMP Regulatory protein ABD1_14830 SM00382 ATPases associated with a variety of cellular activities ABD1_14830 SM00930 ABD1_14830 ABD1_14900 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_14930 SM00382 ATPases associated with a variety of cellular activities ABD1_14950 SM00344 helix_turn_helix ASNC type ABD1_14970 SM00563 Phosphate acyltransferases ABD1_14990 SM01236 ABD1_14990 ABD1_15080 SM00342 helix_turn_helix, arabinose operon control protein ABD1_15160 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_15160 SM00876 Biotin and Thiamin Synthesis associated domain ABD1_15210 SM00530 Helix-turn-helix XRE-family like proteins ABD1_15290 SM00861 Transketolase, pyrimidine binding domain ABD1_15310 SM00867 YceI-like domain ABD1_15370 SM00344 helix_turn_helix ASNC type ABD1_15410 SM00342 helix_turn_helix, arabinose operon control protein ABD1_15430 SM00382 ATPases associated with a variety of cellular activities ABD1_15470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABD1_15490 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ABD1_15610 SM00470 ParB-like nuclease domain ABD1_15640 SM00382 ATPases associated with a variety of cellular activities ABD1_15760 SM00986 Uracil DNA glycosylase superfamily ABD1_15760 SM00987 UreE urease accessory protein, C-terminal domain ABD1_15810 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_15820 SM00411 bacterial (prokaryotic) histone like domain ABD1_15840 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABD1_15870 SM00342 helix_turn_helix, arabinose operon control protein ABD1_16000 SM00382 ATPases associated with a variety of cellular activities ABD1_16110 SM00487 DEAD-like helicases superfamily ABD1_16110 SM00490 helicase superfamily c-terminal domain ABD1_16110 SM00982 ABD1_16110 ABD1_16110 SM01058 CarD-like/TRCF domain ABD1_16130 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ABD1_16160 SM00271 DnaJ molecular chaperone homology domain ABD1_16230 SM00411 bacterial (prokaryotic) histone like domain ABD1_16420 SM01006 Siderophore biosynthesis protein domain ABD1_16470 SM00855 Phosphoglycerate mutase family ABD1_16580 SM00382 ATPases associated with a variety of cellular activities ABD1_16660 SM01324 ABD1_16660 ABD1_16760 SM00493 ABD1_16760 ABD1_16770 SM00341 Helicase and RNase D C-terminal ABD1_16770 SM00474 3'-5' exonuclease ABD1_16830 SM00382 ATPases associated with a variety of cellular activities ABD1_16880 SM00267 diguanylate cyclase ABD1_16910 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_16930 SM00861 Transketolase, pyrimidine binding domain ABD1_16970 SM00829 Enoylreductase ABD1_16990 SM00382 ATPases associated with a variety of cellular activities ABD1_17000 SM00849 Metallo-beta-lactamase superfamily ABD1_17050 SM00342 helix_turn_helix, arabinose operon control protein ABD1_17090 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_17090 SM00866 ABD1_17090 ABD1_17140 SM00382 ATPases associated with a variety of cellular activities ABD1_17150 SM00567 E-Z type HEAT repeats ABD1_17260 SM00882 Coenzyme A transferase ABD1_17270 SM00882 Coenzyme A transferase ABD1_17310 SM00342 helix_turn_helix, arabinose operon control protein ABD1_17360 SM00903 Flavin reductase like domain ABD1_17380 SM00342 helix_turn_helix, arabinose operon control protein ABD1_17450 SM00382 ATPases associated with a variety of cellular activities ABD1_17550 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_17600 SM00155 Phospholipase D. Active site motifs. ABD1_17650 SM00829 Enoylreductase ABD1_17710 SM00448 cheY-homologous receiver domain ABD1_17710 SM00862 Transcriptional regulatory protein, C terminal ABD1_17720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABD1_17720 SM00387 Histidine kinase-like ATPases ABD1_17720 SM00388 His Kinase A (phosphoacceptor) domain ABD1_17740 SM00342 helix_turn_helix, arabinose operon control protein ABD1_17760 SM00822 ABD1_17760 ABD1_17770 SM00822 ABD1_17770 ABD1_17780 SM00487 DEAD-like helicases superfamily ABD1_17780 SM00490 helicase superfamily c-terminal domain ABD1_17820 SM00530 Helix-turn-helix XRE-family like proteins ABD1_18020 SM01400 ABD1_18020 ABD1_18090 SM00342 helix_turn_helix, arabinose operon control protein ABD1_18110 SM00382 ATPases associated with a variety of cellular activities ABD1_18140 SM00829 Enoylreductase ABD1_18150 SM00342 helix_turn_helix, arabinose operon control protein ABD1_18300 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_18300 SM00866 ABD1_18300 ABD1_18450 SM00822 ABD1_18450 ABD1_18540 SM00422 helix_turn_helix, mercury resistance ABD1_18640 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_18640 SM00895 ABD1_18640 ABD1_18670 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABD1_18700 SM00882 Coenzyme A transferase ABD1_18710 SM00882 Coenzyme A transferase ABD1_18780 SM00342 helix_turn_helix, arabinose operon control protein ABD1_18790 SM00903 Flavin reductase like domain ABD1_18880 SM00347 helix_turn_helix multiple antibiotic resistance protein ABD1_18920 SM00855 Phosphoglycerate mutase family ABD1_18960 SM00346 helix_turn_helix isocitrate lyase regulation ABD1_18970 SM00849 Metallo-beta-lactamase superfamily ABD1_19010 SM00564 beta-propeller repeat ABD1_19030 SM00710 Parallel beta-helix repeats ABD1_19100 SM00998 Adenylosuccinate lyase C-terminus ABD1_19120 SM00882 Coenzyme A transferase ABD1_19130 SM00882 Coenzyme A transferase ABD1_19170 SM01192 ABD1_19170 ABD1_19170 SM01193 ABD1_19170 ABD1_19300 SM00382 ATPases associated with a variety of cellular activities ABD1_19300 SM01086 C-terminal, D2-small domain, of ClpB protein ABD1_19340 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABD1_19420 SM01264 ABD1_19420 ABD1_19520 SM00382 ATPases associated with a variety of cellular activities ABD1_19520 SM00962 SRP54-type protein, GTPase domain ABD1_19520 SM00963 SRP54-type protein, helical bundle domain ABD1_19570 SM00116 Domain in cystathionine beta-synthase and other proteins. ABD1_19700 SM00347 helix_turn_helix multiple antibiotic resistance protein ABD1_19720 SM00052 Putative diguanylate phosphodiesterase ABD1_19720 SM00091 PAS domain ABD1_19720 SM00267 diguanylate cyclase ABD1_19810 SM00344 helix_turn_helix ASNC type ABD1_19870 SM00363 S4 RNA-binding domain ABD1_19880 SM00382 ATPases associated with a variety of cellular activities ABD1_19940 SM00935 Outer membrane protein (OmpH-like) ABD1_19960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABD1_20020 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_20030 SM00091 PAS domain ABD1_20030 SM00387 Histidine kinase-like ATPases ABD1_20030 SM00388 His Kinase A (phosphoacceptor) domain ABD1_20040 SM00382 ATPases associated with a variety of cellular activities ABD1_20040 SM00448 cheY-homologous receiver domain ABD1_20200 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_20220 SM00852 Probable molybdopterin binding domain ABD1_20230 SM00852 Probable molybdopterin binding domain ABD1_20260 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_20270 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABD1_20290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABD1_20320 SM00448 cheY-homologous receiver domain ABD1_20320 SM01012 ABD1_20320 ABD1_20370 SM00878 Biotin carboxylase C-terminal domain ABD1_20400 SM01236 ABD1_20400 ABD1_20470 SM00226 Low molecular weight phosphatase family ABD1_20520 SM00382 ATPases associated with a variety of cellular activities ABD1_20570 SM00822 ABD1_20570 ABD1_20630 SM00344 helix_turn_helix ASNC type ABD1_20660 SM00831 Cation transporter/ATPase, N-terminus ABD1_20710 SM00382 ATPases associated with a variety of cellular activities ABD1_20840 SM00344 helix_turn_helix ASNC type ABD1_20850 SM00830 Chorismate mutase type II ABD1_20890 SM00972 Spore Coat Protein U domain ABD1_20920 SM00972 Spore Coat Protein U domain ABD1_20980 SM00382 ATPases associated with a variety of cellular activities ABD1_21010 SM00862 Transcriptional regulatory protein, C terminal ABD1_21140 SM00853 MutL C terminal dimerisation domain ABD1_21140 SM01340 ABD1_21140 ABD1_21190 SM00363 S4 RNA-binding domain ABD1_21350 SM01230 ABD1_21350 ABD1_21360 SM00448 cheY-homologous receiver domain ABD1_21360 SM00862 Transcriptional regulatory protein, C terminal ABD1_21370 SM00387 Histidine kinase-like ATPases ABD1_21370 SM00388 His Kinase A (phosphoacceptor) domain ABD1_21420 SM00905 Dihydroneopterin aldolase ABD1_21450 SM00903 Flavin reductase like domain ABD1_21480 SM00822 ABD1_21480 ABD1_21490 SM00342 helix_turn_helix, arabinose operon control protein ABD1_21510 SM00937 ABD1_21510 ABD1_21740 SM01005 Alanine racemase, C-terminal domain ABD1_21760 SM00460 Transglutaminase/protease-like homologues ABD1_21800 SM01228 ABD1_21800 ABD1_21850 SM00798 AICARFT/IMPCHase bienzyme ABD1_21850 SM00851 MGS-like domain ABD1_21860 SM01209 ABD1_21860 ABD1_21860 SM01210 ABD1_21860 ABD1_21880 SM00382 ATPases associated with a variety of cellular activities ABD1_21880 SM00930 ABD1_21880 ABD1_21900 SM00849 Metallo-beta-lactamase superfamily ABD1_22100 SM00972 Spore Coat Protein U domain ABD1_22150 SM00972 Spore Coat Protein U domain ABD1_22180 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_22180 SM00895 ABD1_22180 ABD1_22220 SM00342 helix_turn_helix, arabinose operon control protein ABD1_22250 SM01034 Sensors of blue-light using FAD ABD1_22520 SM00855 Phosphoglycerate mutase family ABD1_22560 SM00487 DEAD-like helicases superfamily ABD1_22560 SM00490 helicase superfamily c-terminal domain ABD1_22570 SM00357 Cold shock protein domain ABD1_22660 SM00382 ATPases associated with a variety of cellular activities ABD1_22750 SM00830 Chorismate mutase type II ABD1_22860 SM00387 Histidine kinase-like ATPases ABD1_22860 SM00388 His Kinase A (phosphoacceptor) domain ABD1_22870 SM00448 cheY-homologous receiver domain ABD1_22870 SM00862 Transcriptional regulatory protein, C terminal ABD1_22890 SM00382 ATPases associated with a variety of cellular activities ABD1_22940 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_22980 SM00382 ATPases associated with a variety of cellular activities ABD1_23010 SM00062 Bacterial periplasmic substrate-binding proteins ABD1_23100 SM00479 ABD1_23100 ABD1_23120 SM00382 ATPases associated with a variety of cellular activities ABD1_23210 SM00342 helix_turn_helix, arabinose operon control protein ABD1_23310 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_23350 SM00996 S-adenosyl-L-homocysteine hydrolase ABD1_23350 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABD1_23380 SM00052 Putative diguanylate phosphodiesterase ABD1_23380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABD1_23380 SM00091 PAS domain ABD1_23380 SM00267 diguanylate cyclase ABD1_23390 SM00919 Malic enzyme, NAD binding domain ABD1_23390 SM01274 ABD1_23390 ABD1_23410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABD1_23490 SM01230 ABD1_23490 ABD1_23570 SM00463 Small MutS-related domain ABD1_23590 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABD1_23600 SM01092 CO dehydrogenase flavoprotein C-terminal domain ABD1_23710 SM00382 ATPases associated with a variety of cellular activities ABD1_23720 SM00382 ATPases associated with a variety of cellular activities ABD1_23810 SM00382 ATPases associated with a variety of cellular activities ABD1_23930 SM00342 helix_turn_helix, arabinose operon control protein ABD1_23980 SM00020 Trypsin-like serine protease ABD1_24090 SM00841 Elongation factor P, C-terminal ABD1_24090 SM01185 ABD1_24090 ABD1_24120 SM00052 Putative diguanylate phosphodiesterase ABD1_24190 SM00257 Lysin motif ABD1_24230 SM00936 Penicillin-binding protein 5, C-terminal domain ABD1_24320 SM00382 ATPases associated with a variety of cellular activities ABD1_24380 SM00344 helix_turn_helix ASNC type ABD1_24490 SM00487 DEAD-like helicases superfamily ABD1_24490 SM00490 helicase superfamily c-terminal domain ABD1_24550 SM00880 ABD1_24550 ABD1_24550 SM01118 ABD1_24550 ABD1_24650 SM01329 ABD1_24650 ABD1_24850 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABD1_24890 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABD1_24920 SM00487 DEAD-like helicases superfamily ABD1_24920 SM00490 helicase superfamily c-terminal domain ABD1_24940 SM00267 diguanylate cyclase ABD1_25060 SM00358 Double-stranded RNA binding motif ABD1_25090 SM00838 Elongation factor G C-terminus ABD1_25120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABD1_25220 SM00382 ATPases associated with a variety of cellular activities ABD1_25370 SM01211 ABD1_25370 ABD1_25380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABD1_25390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABD1_25400 SM00382 ATPases associated with a variety of cellular activities ABD1_25630 SM00849 Metallo-beta-lactamase superfamily ABD1_25640 SM00382 ATPases associated with a variety of cellular activities ABD1_25790 SM00434 DNA Topoisomerase IV ABD1_25800 SM00893 Electron transfer flavoprotein domain ABD1_25810 SM00893 Electron transfer flavoprotein domain ABD1_25880 SM00382 ATPases associated with a variety of cellular activities ABD1_25890 SM00978 ABD1_25890 ABD1_26150 SM00849 Metallo-beta-lactamase superfamily ABD1_26180 SM00883 Chaperonin 10 Kd subunit ABD1_26200 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABD1_26320 SM00382 ATPases associated with a variety of cellular activities ABD1_26340 SM01103 ABD1_26340 ABD1_26370 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABD1_26380 SM00851 MGS-like domain ABD1_26380 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABD1_26440 SM00854 Bacterial capsule synthesis protein PGA_cap ABD1_26490 SM00881 CoA binding domain ABD1_26530 SM00861 Transketolase, pyrimidine binding domain ABD1_26600 SM00450 Rhodanese Homology Domain ABD1_26810 SM00014 Acid phosphatase homologues ABD1_26880 SM00822 ABD1_26880 ABD1_26910 SM00365 Leucine-rich repeat, SDS22-like subfamily ABD1_26910 SM00369 Leucine-rich repeats, typical (most populated) subfamily ABD1_26970 SM00387 Histidine kinase-like ATPases ABD1_26970 SM00388 His Kinase A (phosphoacceptor) domain ABD1_26980 SM00448 cheY-homologous receiver domain ABD1_26980 SM00862 Transcriptional regulatory protein, C terminal ABD1_27020 SM00563 Phosphate acyltransferases ABD1_27050 SM00244 prohibitin homologues ABD1_27120 SM00829 Enoylreductase ABD1_27130 SM00342 helix_turn_helix, arabinose operon control protein ABD1_27170 SM00342 helix_turn_helix, arabinose operon control protein ABD1_27240 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_27310 SM00845 GatB domain ABD1_27560 SM00073 Histidine Phosphotransfer domain ABD1_27560 SM00260 Two component signalling adaptor domain ABD1_27560 SM00387 Histidine kinase-like ATPases ABD1_27560 SM00448 cheY-homologous receiver domain ABD1_27560 SM01231 ABD1_27560 ABD1_27570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABD1_27580 SM00260 Two component signalling adaptor domain ABD1_27590 SM00448 cheY-homologous receiver domain ABD1_27600 SM00448 cheY-homologous receiver domain ABD1_27710 SM00671 Sel1-like repeats. ABD1_27760 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ABD1_27760 SM01232 ABD1_27760 ABD1_27800 SM00838 Elongation factor G C-terminus ABD1_27930 SM00564 beta-propeller repeat ABD1_28060 SM00957 SecA DEAD-like domain ABD1_28060 SM00958 SecA preprotein cross-linking domain ABD1_28140 SM00342 helix_turn_helix, arabinose operon control protein ABD1_28260 SM00448 cheY-homologous receiver domain ABD1_28260 SM00862 Transcriptional regulatory protein, C terminal ABD1_28270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABD1_28270 SM00387 Histidine kinase-like ATPases ABD1_28270 SM00388 His Kinase A (phosphoacceptor) domain ABD1_28500 SM00387 Histidine kinase-like ATPases ABD1_28500 SM00388 His Kinase A (phosphoacceptor) domain ABD1_28560 SM01323 ABD1_28560 ABD1_28620 SM00481 DNA polymerase alpha chain like domain ABD1_28670 SM00450 Rhodanese Homology Domain ABD1_28770 SM00267 diguanylate cyclase ABD1_28800 SM00155 Phospholipase D. Active site motifs. ABD1_28810 SM00563 Phosphate acyltransferases ABD1_28870 SM00650 Ribosomal RNA adenine dimethylases ABD1_28940 SM00878 Biotin carboxylase C-terminal domain ABD1_29070 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABD1_29130 SM00729 Elongator protein 3, MiaB family, Radical SAM ABD1_29230 SM00342 helix_turn_helix, arabinose operon control protein ABD1_29290 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_29290 SM00955 ABD1_29290 ABD1_29410 SM00662 RNA polymerases D ABD1_29420 SM00363 S4 RNA-binding domain ABD1_29420 SM01390 ABD1_29420 ABD1_29550 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABD1_29560 SM01374 ABD1_29560 ABD1_29600 SM00322 K homology RNA-binding domain ABD1_29630 SM01382 ABD1_29630 ABD1_29630 SM01383 ABD1_29630 ABD1_29670 SM01403 ABD1_29670 ABD1_29770 SM00563 Phosphate acyltransferases ABD1_29800 SM00487 DEAD-like helicases superfamily ABD1_29800 SM00490 helicase superfamily c-terminal domain ABD1_29890 SM00382 ATPases associated with a variety of cellular activities ABD1_29910 SM00487 DEAD-like helicases superfamily ABD1_29910 SM00490 helicase superfamily c-terminal domain ABD1_29930 SM00861 Transketolase, pyrimidine binding domain ABD1_30010 SM00116 Domain in cystathionine beta-synthase and other proteins. ABD1_30210 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABD1_30580 SM00072 Guanylate kinase homologues. ABD1_30590 SM01409 ABD1_30590 ABD1_30600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABD1_30600 SM00954 Region found in RelA / SpoT proteins ABD1_30760 SM00965 Secretin and TonB N terminus short domain ABD1_30800 SM00842 Cell division protein FtsA ABD1_31030 SM00671 Sel1-like repeats. ABD1_31040 SM00382 ATPases associated with a variety of cellular activities ABD1_31070 SM00947 Carbonic anhydrase ABD1_31080 SM00316 Ribosomal protein S1-like RNA-binding domain ABD1_31080 SM00732 Likely ribonuclease with RNase H fold. ABD1_31090 SM00448 cheY-homologous receiver domain ABD1_31090 SM00862 Transcriptional regulatory protein, C terminal ABD1_31100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABD1_31100 SM00387 Histidine kinase-like ATPases ABD1_31100 SM00388 His Kinase A (phosphoacceptor) domain ABD1_31170 SM00474 3'-5' exonuclease ABD1_31190 SM00530 Helix-turn-helix XRE-family like proteins ABD1_31220 SM00357 Cold shock protein domain ABD1_31260 SM00342 helix_turn_helix, arabinose operon control protein ABD1_31300 SM00477 DNA/RNA non-specific endonuclease ABD1_31300 SM00892 DNA/RNA non-specific endonuclease ABD1_31330 SM00342 helix_turn_helix, arabinose operon control protein ABD1_31470 SM00342 helix_turn_helix, arabinose operon control protein ABD1_31770 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_31790 SM00530 Helix-turn-helix XRE-family like proteins ABD1_31880 SM00829 Enoylreductase ABD1_31910 SM00267 diguanylate cyclase ABD1_31970 SM00387 Histidine kinase-like ATPases ABD1_31970 SM00388 His Kinase A (phosphoacceptor) domain ABD1_31970 SM00448 cheY-homologous receiver domain ABD1_31990 SM00421 helix_turn_helix, Lux Regulon ABD1_31990 SM00448 cheY-homologous receiver domain ABD1_32020 SM00344 helix_turn_helix ASNC type ABD1_32100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABD1_32110 SM00937 ABD1_32110 ABD1_32160 SM00116 Domain in cystathionine beta-synthase and other proteins. ABD1_32160 SM01240 ABD1_32160 ABD1_32180 SM00849 Metallo-beta-lactamase superfamily ABD1_32270 SM00864 Tubulin/FtsZ family, GTPase domain ABD1_32270 SM00865 Tubulin/FtsZ family, C-terminal domain ABD1_32280 SM00842 Cell division protein FtsA ABD1_32420 SM00267 diguanylate cyclase ABD1_32490 SM00095 Transthyretin ABD1_32570 SM00387 Histidine kinase-like ATPases ABD1_32570 SM00433 TopoisomeraseII ABD1_32660 SM00257 Lysin motif ABD1_32770 SM00448 cheY-homologous receiver domain ABD1_32770 SM00862 Transcriptional regulatory protein, C terminal ABD1_32780 SM00387 Histidine kinase-like ATPases ABD1_32780 SM00388 His Kinase A (phosphoacceptor) domain ABD1_32810 SM00450 Rhodanese Homology Domain ABD1_32830 SM00248 ankyrin repeats ABD1_32840 SM01060 ABD1_32840 ABD1_33100 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_33100 SM00866 ABD1_33100 ABD1_33120 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABD1_33180 SM00346 helix_turn_helix isocitrate lyase regulation ABD1_33240 SM01130 ABD1_33240 ABD1_33290 SM00382 ATPases associated with a variety of cellular activities ABD1_33350 SM00478 endonuclease III ABD1_33350 SM00525 ABD1_33350 ABD1_33390 SM00829 Enoylreductase ABD1_33400 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABD1_33480 SM00271 DnaJ molecular chaperone homology domain ABD1_33700 SM00849 Metallo-beta-lactamase superfamily ABD1_33740 SM00235 Zinc-dependent metalloprotease ABD1_33750 SM00235 Zinc-dependent metalloprotease ABD1_33790 SM01001 AIR carboxylase ABD1_33830 SM00014 Acid phosphatase homologues ABD1_33970 SM01234 ABD1_33970 ABD1_p00050 SM00530 Helix-turn-helix XRE-family like proteins ABD1_p00060 SM00671 Sel1-like repeats.