ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 Gene3D G3DSA:1.10.10.10 1 61 1.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 Pfam PF01037 Lrp/AsnC ligand binding domain 74 145 1.7E-20 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 48 1.8E-13 T 12-10-2018 ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 Gene3D G3DSA:3.30.70.920 62 145 1.6E-21 T 12-10-2018 ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 5.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 5.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 5.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 SUPERFAMILY SSF54909 71 145 6.3E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 SUPERFAMILY SSF46785 6 97 1.7E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_20630 bb92314808073aa4fccfd12e5b36c81e 147 SMART SM00344 1 117 1.2E-22 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 Pfam PF00871 Acetokinase family 25 401 4.2E-127 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 388 400 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 333 349 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 25 36 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 311 324 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 185 198 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PRINTS PR00471 Acetate kinase family signature 214 235 5.1E-41 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 Hamap MF_00020 Acetate kinase [ackA]. 1 410 151.286 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 SUPERFAMILY SSF53067 169 406 4.07E-78 T 12-10-2018 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 SUPERFAMILY SSF53067 24 207 2.59E-58 T 12-10-2018 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 TIGRFAM TIGR00016 ackA: acetate kinase 23 406 8.5E-130 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 PIRSF PIRSF000722 21 411 2.0E-128 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 Gene3D G3DSA:3.30.420.40 17 206 7.5E-61 T 12-10-2018 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 25 36 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABD1_04550 e76c424edf8eac8098fefd028a987bb0 420 Gene3D G3DSA:3.30.420.40 209 418 1.8E-69 T 12-10-2018 ABD1_04860 80bfb54cbfbad7aa6249c9339ebed2f0 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 ABD1_04860 80bfb54cbfbad7aa6249c9339ebed2f0 511 Pfam PF00221 Aromatic amino acid lyase 11 472 2.4E-155 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ABD1_04860 80bfb54cbfbad7aa6249c9339ebed2f0 511 SUPERFAMILY SSF48557 3 504 7.53E-166 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_04860 80bfb54cbfbad7aa6249c9339ebed2f0 511 Gene3D G3DSA:1.10.275.10 3 200 2.6E-59 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_04860 80bfb54cbfbad7aa6249c9339ebed2f0 511 Gene3D G3DSA:1.20.200.10 201 502 7.7E-94 T 12-10-2018 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SMART SM00387 799 912 2.8E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SUPERFAMILY SSF55874 742 906 7.07E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 799 906 6.8E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Pfam PF00512 His Kinase A (phospho-acceptor) domain 687 752 1.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Gene3D G3DSA:1.10.287.130 673 752 3.2E-23 T 12-10-2018 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Gene3D G3DSA:3.30.565.10 753 912 2.1E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Pfam PF00072 Response regulator receiver domain 935 1045 3.2E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 894 907 4.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 888 4.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 863 4.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 849 4.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SUPERFAMILY SSF47384 673 753 8.04E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Gene3D G3DSA:3.40.50.12740 932 1102 6.5E-24 T 12-10-2018 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SMART SM00388 686 752 6.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SUPERFAMILY SSF52172 931 1085 3.7E-26 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 Gene3D G3DSA:1.10.4160.10 34 492 1.4E-15 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily ABD1_13950 0fc154e4e34b86f2d058d212191c73fc 1157 SMART SM00448 933 1045 5.8E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_27840 e66905009363eb486df570fbb1c30cea 401 Pfam PF01139 tRNA-splicing ligase RtcB 31 401 7.5E-132 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_27840 e66905009363eb486df570fbb1c30cea 401 SUPERFAMILY SSF103365 15 401 3.79E-132 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_27840 e66905009363eb486df570fbb1c30cea 401 Gene3D G3DSA:3.90.1860.10 3 401 3.7E-118 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_15540 15d583dab162d4217969d20f7045145f 345 Gene3D G3DSA:3.20.20.70 1 345 9.9E-157 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_15540 15d583dab162d4217969d20f7045145f 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABD1_15540 15d583dab162d4217969d20f7045145f 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 3.3E-95 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABD1_15540 15d583dab162d4217969d20f7045145f 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 1.3E-194 T 12-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 ABD1_15540 15d583dab162d4217969d20f7045145f 345 PIRSF PIRSF001359 1 329 1.0E-81 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABD1_15540 15d583dab162d4217969d20f7045145f 345 SUPERFAMILY SSF51569 3 328 6.89E-105 T 12-10-2018 ABD1_15540 15d583dab162d4217969d20f7045145f 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 2.5E-91 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABD1_32930 017a7015c8d9897ef370757b9d046667 305 SUPERFAMILY SSF55326 2 136 2.09E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_32930 017a7015c8d9897ef370757b9d046667 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 7.1E-28 T 12-10-2018 IPR016188 PurM-like, N-terminal domain ABD1_32930 017a7015c8d9897ef370757b9d046667 305 SUPERFAMILY SSF56042 140 286 5.68E-34 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_32930 017a7015c8d9897ef370757b9d046667 305 Gene3D G3DSA:3.90.650.10 142 305 7.6E-49 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_32930 017a7015c8d9897ef370757b9d046667 305 PIRSF PIRSF005303 1 304 1.6E-96 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ABD1_32930 017a7015c8d9897ef370757b9d046667 305 Gene3D G3DSA:3.30.1330.10 1 141 2.1E-50 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_32930 017a7015c8d9897ef370757b9d046667 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 185 286 1.6E-5 T 12-10-2018 IPR010918 PurM-like, C-terminal domain ABD1_32930 017a7015c8d9897ef370757b9d046667 305 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 1.2E-107 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ABD1_32930 017a7015c8d9897ef370757b9d046667 305 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 29.478 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ABD1_04320 c167b65e52d02011b2bc31d8a1c4eca5 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 5.3E-75 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABD1_04320 c167b65e52d02011b2bc31d8a1c4eca5 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABD1_04320 c167b65e52d02011b2bc31d8a1c4eca5 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.596 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABD1_04320 c167b65e52d02011b2bc31d8a1c4eca5 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 262 2.6E-78 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.9E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 Gene3D G3DSA:1.10.10.10 1 86 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 Pfam PF03466 LysR substrate binding domain 90 294 1.9E-24 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 SUPERFAMILY SSF46785 5 84 1.63E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 SUPERFAMILY SSF53850 91 297 1.38E-24 T 12-10-2018 ABD1_15010 1814e7adb1d9a723f54f28576c84256b 299 Gene3D G3DSA:3.40.190.290 95 295 1.2E-26 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 Gene3D G3DSA:1.10.3860.10 1 411 5.3E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 SUPERFAMILY SSF118215 3 404 2.35E-107 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 Pfam PF00375 Sodium:dicarboxylate symporter family 3 403 1.9E-118 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 5.2E-54 T 12-10-2018 ABD1_29750 272a60a2763ad555cb0e2d95475eb1de 412 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 5.2E-54 T 12-10-2018 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 SMART SM00419 170 218 4.5E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 Gene3D G3DSA:2.60.120.10 21 148 3.0E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 Gene3D G3DSA:1.10.10.10 149 217 3.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 SMART SM00100 14 132 4.2E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 SUPERFAMILY SSF51206 20 147 1.15E-30 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.1E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.1E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.6E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 2.4E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_11920 c2e8920593e02d50682751bbe6f608f6 235 SUPERFAMILY SSF46785 149 218 9.11E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_21180 84f90d698a3c1ff938f11bbc0db863b2 65 Gene3D G3DSA:3.40.630.30 2 64 7.4E-15 T 12-10-2018 ABD1_21180 84f90d698a3c1ff938f11bbc0db863b2 65 SUPERFAMILY SSF55729 4 59 5.93E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_21180 84f90d698a3c1ff938f11bbc0db863b2 65 Pfam PF00583 Acetyltransferase (GNAT) family 4 51 5.1E-10 T 12-10-2018 IPR000182 GNAT domain ABD1_08520 14489558ea32e18dc9d488488011dda4 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 5.8E-132 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 SUPERFAMILY SSF51569 6 335 4.15E-134 T 12-10-2018 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 Gene3D G3DSA:3.20.20.70 2 337 2.0E-140 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PIRSF PIRSF001415 2 336 6.0E-140 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.7E-55 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_08520 14489558ea32e18dc9d488488011dda4 337 SMART SM01004 10 333 4.6E-223 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 306 7.1E-40 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Gene3D G3DSA:3.40.50.720 157 313 7.3E-41 T 12-10-2018 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 SUPERFAMILY SSF69742 1 153 7.85E-45 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 7.1E-120 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 SUPERFAMILY SSF69075 317 415 6.8E-21 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 PIRSF PIRSF000445 1 427 1.9E-138 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 28.02 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Gene3D G3DSA:3.30.460.30 2 154 5.5E-52 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 SUPERFAMILY SSF51735 159 315 7.69E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 413 4.2E-15 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_07880 2a55bf97861e4a159ab6a68052b105b9 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 5.1E-46 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABD1_18590 dbcf891857763a2760356cc220e8090a 298 SUPERFAMILY SSF160104 67 203 4.97E-9 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 ABD1_18590 dbcf891857763a2760356cc220e8090a 298 Gene3D G3DSA:2.40.400.10 57 249 1.8E-8 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 ABD1_25600 28698215e34a3a675db3731991b0df0e 269 Gene3D G3DSA:3.40.50.1820 2 268 1.1E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_25600 28698215e34a3a675db3731991b0df0e 269 SUPERFAMILY SSF53474 4 264 7.03E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_25600 28698215e34a3a675db3731991b0df0e 269 Pfam PF12697 Alpha/beta hydrolase family 50 257 6.1E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SMART SM00982 1010 1110 1.3E-46 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF52540 354 467 2.44E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SMART SM01058 481 578 2.2E-43 T 12-10-2018 IPR003711 CarD-like/TRCF domain ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.40.50.300 544 783 1.7E-229 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Pfam PF02559 CarD-like/TRCF domain 482 575 1.7E-21 T 12-10-2018 IPR003711 CarD-like/TRCF domain ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.90.1150.50 1006 1152 2.2E-44 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1084 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.40.50.11180 27 338 8.2E-100 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.40.50.300 480 991 1.7E-229 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Pfam PF00270 DEAD/DEAH box helicase 609 764 5.8E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF141259 473 550 6.93E-22 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:2.30.30.840 485 543 1.7E-229 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF52540 784 992 1.3E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF143517 997 1148 7.85E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SMART SM00490 828 912 2.5E-17 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.40.50.11140 360 455 2.5E-9 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF52540 8 346 1.78E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 39 1149 27.224 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SUPERFAMILY SSF52540 525 785 7.83E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Gene3D G3DSA:3.30.2060.10 128 213 8.2E-100 T 12-10-2018 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Pfam PF03461 TRCF domain 1011 1101 2.8E-27 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 SMART SM00487 602 797 6.4E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_16110 67108707241a899c19d5b61c9164f5b3 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 911 1.4E-16 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 7.5E-135 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 48.818 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 1.4E-137 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 Gene3D G3DSA:3.20.20.210 1 357 1.2E-165 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 SUPERFAMILY SSF51726 1 355 2.09E-116 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_23660 5bc241f215d70d3271d74d191325b7ef 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 SMART SM00257 1 45 5.4E-17 T 12-10-2018 IPR018392 LysM domain ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 SUPERFAMILY SSF54106 1 44 1.31E-10 T 12-10-2018 ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 Pfam PF05257 CHAP domain 520 610 6.6E-6 T 12-10-2018 IPR007921 CHAP domain ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 SUPERFAMILY SSF54001 523 611 7.85E-8 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 SUPERFAMILY SSF53955 204 450 2.14E-17 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 Gene3D G3DSA:3.90.1720.10 483 626 6.1E-6 T 12-10-2018 ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 Gene3D G3DSA:3.10.350.10 1 57 9.1E-17 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_32660 22506a35dea97d4d6864a46d6421bcef 666 Pfam PF01476 LysM domain 2 44 2.9E-15 T 12-10-2018 IPR018392 LysM domain ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Pfam PF00271 Helicase conserved C-terminal domain 466 576 4.0E-17 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Gene3D G3DSA:3.40.50.300 198 439 9.2E-84 T 12-10-2018 ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 651 4.8E-230 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 SUPERFAMILY SSF50249 2 166 1.64E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 SUPERFAMILY SSF52540 282 639 1.36E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Pfam PF00270 DEAD/DEAH box helicase 262 422 2.1E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Gene3D G3DSA:3.40.50.300 446 618 2.1E-54 T 12-10-2018 ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Pfam PF17191 RecG wedge domain 6 163 3.9E-21 T 12-10-2018 IPR033454 RecG, wedge domain ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 SUPERFAMILY SSF52540 192 442 2.48E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 Gene3D G3DSA:2.40.50.140 40 133 2.1E-9 T 12-10-2018 ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 SMART SM00487 255 448 4.8E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_29800 4396f7643bd6850dfe0884aabde94dc1 681 SMART SM00490 493 577 8.6E-22 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.7E-66 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF52016 162 374 4.32E-65 T 12-10-2018 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 ProSitePatterns PS00450 Aconitase family signature 1. 710 727 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 6.5E-39 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:1.25.40.310 1 160 2.4E-67 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 PIRSF PIRSF036687 1 868 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 862 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.30.499.10 407 534 1.5E-145 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.20.19.10 162 363 1.2E-72 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 3.0E-92 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.40.1060.10 387 689 1.5E-145 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF53732 381 865 4.19E-144 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF74778 2 159 1.01E-67 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABD1_21280 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.30.499.10 691 874 1.1E-67 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 SUPERFAMILY SSF63411 790 975 2.67E-39 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Gene3D G3DSA:3.30.830.10 499 949 3.4E-109 T 12-10-2018 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 SUPERFAMILY SSF63411 23 246 8.83E-43 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 3.8E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 SUPERFAMILY SSF63411 522 772 4.96E-52 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 SUPERFAMILY SSF63411 261 523 2.97E-55 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Gene3D G3DSA:3.30.830.10 530 787 3.4E-109 T 12-10-2018 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 SMART SM01264 466 715 5.2E-83 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 154 8.4E-8 T 12-10-2018 IPR011765 Peptidase M16, N-terminal ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Pfam PF08367 Peptidase M16C associated 466 715 1.3E-58 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Gene3D G3DSA:3.30.830.10 260 487 1.4E-55 T 12-10-2018 ABD1_19420 e2a8243b46b8e5fa5030e732b733930a 979 Gene3D G3DSA:3.30.830.10 3 253 1.3E-82 T 12-10-2018 ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 Gene3D G3DSA:3.40.190.10 175 251 2.2E-8 T 12-10-2018 ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 Pfam PF03466 LysR substrate binding domain 87 285 7.0E-32 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 SUPERFAMILY SSF53850 87 286 2.26E-31 T 12-10-2018 ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 Gene3D G3DSA:3.40.190.10 84 174 2.2E-18 T 12-10-2018 ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 SUPERFAMILY SSF46785 1 110 5.44E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_30100 6d19990a92657a2d61fe44fe6fd99b1e 288 Gene3D G3DSA:1.10.10.10 1 83 7.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Pfam PF04055 Radical SAM superfamily 88 249 9.6E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Gene3D G3DSA:3.20.20.70 81 273 1.3E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 SUPERFAMILY SSF102114 49 313 4.58E-65 T 12-10-2018 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 310 4.5E-122 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 150.295 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 70 7.6E-7 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 SMART SM00729 81 286 4.8E-20 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_23310 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 PIRSF PIRSF005963 1 334 1.2E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 SUPERFAMILY SSF74863 27 135 4.97E-28 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 Gene3D G3DSA:2.60.40.1250 22 147 1.9E-31 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 210 409 6.0E-17 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 Pfam PF00085 Thioredoxin 487 594 3.3E-8 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 Gene3D G3DSA:3.40.30.10 473 601 4.5E-23 T 12-10-2018 ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 Pfam PF11412 Disulphide bond corrector protein DsbC 28 135 4.5E-27 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 ProSitePatterns PS00194 Thioredoxin family active site. 506 524 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABD1_32430 dcd472f1ecab5db3f35d7bf22f899fdc 604 SUPERFAMILY SSF52833 477 595 4.84E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Pfam PF00668 Condensation domain 497 867 6.0E-22 T 12-10-2018 IPR001242 Condensation domain ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Pfam PF00668 Condensation domain 26 456 1.8E-34 T 12-10-2018 IPR001242 Condensation domain ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 SUPERFAMILY SSF52777 209 453 5.11E-41 T 12-10-2018 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 SUPERFAMILY SSF52777 643 864 7.67E-36 T 12-10-2018 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Gene3D G3DSA:3.30.559.10 23 200 5.7E-34 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Gene3D G3DSA:3.30.559.10 465 630 5.5E-30 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 SUPERFAMILY SSF52777 467 622 4.34E-13 T 12-10-2018 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Gene3D G3DSA:3.30.559.30 639 876 6.2E-36 T 12-10-2018 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 Gene3D G3DSA:3.30.559.30 207 462 1.0E-61 T 12-10-2018 ABD1_23770 a1b9e374d705fce1ecd04c7283762888 980 SUPERFAMILY SSF52777 29 200 8.12E-17 T 12-10-2018 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 Gene3D G3DSA:3.30.1130.10 132 270 4.2E-55 T 12-10-2018 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 SUPERFAMILY SSF55620 169 253 6.45E-11 T 12-10-2018 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 TIGRFAM TIGR03138 QueF: queuine synthase 3 270 2.5E-114 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 Gene3D G3DSA:3.30.1130.10 14 130 8.7E-41 T 12-10-2018 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 122 1.4E-38 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 270 121.551 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 Pfam PF14489 QueF-like protein 183 254 2.0E-21 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABD1_23140 f6ed862b588adc0c3625702714757fdc 270 PIRSF PIRSF004750 1 270 8.5E-111 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABD1_05830 2eb5dd7f53ebf9236096f9de37317a45 272 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 253 5.5E-73 T 12-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like ABD1_05830 2eb5dd7f53ebf9236096f9de37317a45 272 Gene3D G3DSA:3.30.420.10 5 213 1.7E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_05830 2eb5dd7f53ebf9236096f9de37317a45 272 SUPERFAMILY SSF53098 4 221 9.11E-34 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 Pfam PF00842 Alanine racemase, C-terminal domain 238 362 9.4E-38 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 Gene3D G3DSA:3.20.20.10 11 220 6.0E-108 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 Hamap MF_01201 Alanine racemase. 2 366 31.24 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 Pfam PF01168 Alanine racemase, N-terminal domain 9 222 6.5E-62 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 SMART SM01005 237 366 3.8E-58 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 TIGRFAM TIGR00492 alr: alanine racemase 3 362 9.8E-106 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 SUPERFAMILY SSF50621 231 362 1.5E-41 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 Gene3D G3DSA:2.40.37.10 9 361 6.0E-108 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 270 285 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 121 133 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 291 308 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 155 166 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 27 43 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 61 79 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 195 222 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 253 268 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 PRINTS PR00992 Alanine racemase signature 348 361 3.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_00980 9b13868414edc1e9ade357aab638ddef 367 SUPERFAMILY SSF51419 9 238 7.69E-59 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 1 359 1.0E-181 T 12-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 Pfam PF13378 Enolase C-terminal domain-like 139 352 4.6E-42 T 12-10-2018 IPR029065 Enolase C-terminal domain-like ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 SMART SM00922 135 232 3.3E-19 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 Gene3D G3DSA:3.20.20.120 109 344 7.8E-118 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 4 116 5.0E-31 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 182 213 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 SUPERFAMILY SSF51604 104 358 2.62E-64 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 SUPERFAMILY SSF54826 1 117 8.4E-31 T 12-10-2018 ABD1_18670 8b3f0c712988b4e5bef2eee23076989d 359 Gene3D G3DSA:3.30.390.10 19 356 7.8E-118 T 12-10-2018 IPR029017 Enolase-like, N-terminal ABD1_14240 618d7a7a7f011a28de0a730abf1360d1 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 95 1.2E-24 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein ABD1_14240 618d7a7a7f011a28de0a730abf1360d1 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 50.196 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit ABD1_14240 618d7a7a7f011a28de0a730abf1360d1 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 4.0E-36 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit ABD1_14240 618d7a7a7f011a28de0a730abf1360d1 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 2.6E-35 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 SUPERFAMILY SSF51230 66 136 5.5E-22 T 12-10-2018 IPR011053 Single hybrid motif ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 Gene3D G3DSA:2.40.50.100 62 136 6.3E-28 T 12-10-2018 ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 136 7.5E-38 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 98 9.3E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 67 80 9.3E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 112 9.3E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABD1_20360 10eb8042ec03252beede5c11ddc49926 139 Pfam PF00364 Biotin-requiring enzyme 66 136 3.2E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_19510 c3d010bceb57074bcebd34af3fdf98b0 198 Pfam PF00881 Nitroreductase family 8 176 1.2E-15 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_19510 c3d010bceb57074bcebd34af3fdf98b0 198 Gene3D G3DSA:3.40.109.10 1 198 5.9E-82 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_19510 c3d010bceb57074bcebd34af3fdf98b0 198 SUPERFAMILY SSF55469 4 197 2.49E-67 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 SUPERFAMILY SSF53659 4 416 2.5E-142 T 12-10-2018 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 417 2.5E-220 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 1.4E-111 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 Gene3D G3DSA:3.40.718.10 1 417 1.2E-180 T 12-10-2018 ABD1_24650 506811da26f94c3a6f2ec47ac8136a07 418 SMART SM01329 30 412 3.9E-178 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.999 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 SMART SM01374 1 122 9.2E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.3E-57 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-54 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29560 7565f0bba13127ad8763ed80e9ed9605 122 SUPERFAMILY SSF50193 1 122 6.28E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 SUPERFAMILY SSF51735 6 222 3.6E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 Pfam PF00106 short chain dehydrogenase 6 193 4.3E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 PIRSF PIRSF000126 1 260 4.4E-70 T 12-10-2018 ABD1_25970 8a208cf9e92d2ca1fe01780b7266c16a 260 Gene3D G3DSA:3.40.50.720 4 260 1.1E-65 T 12-10-2018 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Gene3D G3DSA:1.10.287.1080 145 245 6.7E-25 T 12-10-2018 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 146 239 18.775 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 SUPERFAMILY SSF141734 4 120 1.18E-48 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 SUPERFAMILY SSF101386 147 243 6.76E-20 T 12-10-2018 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 7.0E-27 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 244 33.748 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 31.876 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Gene3D G3DSA:3.10.20.400 2 97 1.8E-38 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 4.6E-34 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 149 239 2.4E-24 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABD1_03200 5991fdfcc68450aac6a0308de58d6261 257 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 152 242 4.1E-11 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 2.3E-154 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 Gene3D G3DSA:3.40.640.10 59 304 1.2E-151 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 SUPERFAMILY SSF53383 15 401 2.42E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_30200 db589f9a97a849cd1601f229e2520040 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 9.8E-221 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 Pfam PF00202 Aminotransferase class-III 25 399 6.5E-123 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 PIRSF PIRSF000521 161 402 1.0E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 PIRSF PIRSF000521 28 160 5.0E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.712 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_30200 db589f9a97a849cd1601f229e2520040 404 Gene3D G3DSA:3.90.1150.10 25 392 1.2E-151 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 Pfam PF01979 Amidohydrolase family 57 397 6.3E-27 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 SUPERFAMILY SSF51556 60 360 7.63E-87 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 397 1.2E-151 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 Gene3D G3DSA:2.30.40.10 7 396 2.4E-161 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 43.797 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 Gene3D G3DSA:3.20.20.140 61 359 2.4E-161 T 12-10-2018 ABD1_33050 87983f390cdb106d12bb63b8d41c9e57 401 SUPERFAMILY SSF51338 1 398 1.89E-31 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 SUPERFAMILY SSF52402 4 222 1.85E-65 T 12-10-2018 ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 Gene3D G3DSA:3.40.50.620 3 218 2.4E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 7.8E-63 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 PIRSF PIRSF006293 1 223 1.9E-77 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 Pfam PF06508 Queuosine biosynthesis protein QueC 4 212 1.2E-76 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABD1_25270 699fdffc736e02dbe954de44dc073b89 223 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 54.364 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 Pfam PF12019 Type II transport protein GspH 47 143 2.6E-5 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 8.0E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 Gene3D G3DSA:3.30.700.10 10 145 6.1E-15 T 12-10-2018 ABD1_30560 2646a087c79df1e30a1849e0460e34af 157 SUPERFAMILY SSF54523 10 126 5.96E-15 T 12-10-2018 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 PIRSF PIRSF001220 1 314 8.5E-33 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 3.7E-5 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 3.7E-5 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.7E-5 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 SUPERFAMILY SSF53774 1 322 6.54E-61 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 Gene3D G3DSA:3.40.50.40 208 323 1.3E-11 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 Pfam PF00710 Asparaginase, N-terminal 3 174 1.0E-32 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 SMART SM00870 3 315 4.4E-24 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 PIRSF PIRSF500176 1 304 7.8E-38 T 12-10-2018 ABD1_03950 923a1b0cd9427cc435bc2a79491a96e9 323 Gene3D G3DSA:3.40.50.1170 1 202 1.2E-35 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 573 6.0E-208 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 Gene3D G3DSA:1.20.1560.10 1 324 6.4E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 Pfam PF00005 ABC transporter 352 501 3.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 SMART SM00382 360 547 1.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 SUPERFAMILY SSF90123 10 321 1.44E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 SUPERFAMILY SSF52540 327 570 6.01E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 Pfam PF00664 ABC transporter transmembrane region 24 291 8.8E-48 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABD1_15640 2bf3d4aba5b18d14528270e70af5566c 575 Gene3D G3DSA:3.40.50.300 326 574 1.9E-94 T 12-10-2018 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 SMART SM00382 99 252 1.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.7E-72 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 SMART SM00963 1 86 1.3E-36 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 SUPERFAMILY SSF52540 42 351 5.31E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 SMART SM00962 100 296 4.1E-112 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Gene3D G3DSA:1.10.260.30 310 447 3.8E-37 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 SUPERFAMILY SSF47446 298 432 1.44E-43 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 33.781 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Gene3D G3DSA:1.20.120.140 5 305 6.5E-122 T 12-10-2018 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 1.0E-174 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Gene3D G3DSA:3.40.50.300 90 285 6.5E-122 T 12-10-2018 ABD1_07490 eeb4f8efa9af814e2abd5f2a9d5d673c 469 Pfam PF02978 Signal peptide binding domain 329 429 1.1E-29 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 SUPERFAMILY SSF53901 269 390 1.04E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 1.9E-89 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 9.2E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 PIRSF PIRSF000429 1 391 1.0E-116 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 SUPERFAMILY SSF53901 3 267 3.84E-82 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 Gene3D G3DSA:3.40.47.10 5 274 7.0E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 Gene3D G3DSA:3.40.47.10 126 388 7.0E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 5.1E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_27880 4ebd307c91e6e7fd5639aa79a13624cb 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:1.10.10.10 130 238 7.8E-41 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00862 155 231 2.8E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF52172 8 130 3.42E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF46894 135 232 5.1E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:3.40.50.2300 1 129 3.9E-37 T 12-10-2018 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00072 Response regulator receiver domain 10 119 1.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_07000 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00448 8 118 6.1E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 SUPERFAMILY SSF53720 10 476 9.56E-114 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 Gene3D G3DSA:3.40.605.10 33 452 1.2E-147 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 Pfam PF00171 Aldehyde dehydrogenase family 38 444 6.1E-90 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 Gene3D G3DSA:3.40.309.10 230 432 1.2E-147 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 PIRSF PIRSF036492 2 482 1.8E-156 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABD1_04200 6bed6f5804207b24acdcfa2c6c7cbfef 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Gene3D G3DSA:1.20.58.760 369 567 2.0E-72 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 160 292 4.3E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 70 562 1.3E-232 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 SUPERFAMILY SSF52540 114 363 2.31E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 SMART SM00382 156 295 1.2E-25 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Gene3D G3DSA:3.40.50.300 108 294 1.5E-70 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Gene3D G3DSA:1.10.8.60 295 368 1.1E-26 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 164 183 4.8E-5 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 583 598 4.8E-5 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 SUPERFAMILY SSF140990 374 569 1.83E-74 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Pfam PF01434 Peptidase family M41 354 560 2.3E-78 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 ProSitePatterns PS00674 AAA-protein family signature. 263 281 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Gene3D G3DSA:2.40.50.920 1 68 7.8E-12 T 12-10-2018 ABD1_26320 f316fe3b526cb1fd09ffda27e9f509c7 598 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 576 36.13 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ABD1_12230 54f11dbe03210dd965f5ba9db3bfd9de 166 Pfam PF00866 Ring hydroxylating beta subunit 18 158 3.9E-49 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 ABD1_12230 54f11dbe03210dd965f5ba9db3bfd9de 166 Gene3D G3DSA:3.10.450.50 4 166 1.7E-48 T 12-10-2018 ABD1_12230 54f11dbe03210dd965f5ba9db3bfd9de 166 SUPERFAMILY SSF54427 6 166 6.68E-56 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_12230 54f11dbe03210dd965f5ba9db3bfd9de 166 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 12 166 2.9E-92 T 12-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 ABD1_14480 2670d413b6b8805188671c696694d099 245 SMART SM00345 21 79 8.6E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14480 2670d413b6b8805188671c696694d099 245 SUPERFAMILY SSF46785 17 83 2.72E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14480 2670d413b6b8805188671c696694d099 245 Gene3D G3DSA:1.10.10.10 3 80 3.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14480 2670d413b6b8805188671c696694d099 245 Pfam PF07729 FCD domain 89 211 2.5E-22 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_14480 2670d413b6b8805188671c696694d099 245 SUPERFAMILY SSF48008 86 217 1.65E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_14480 2670d413b6b8805188671c696694d099 245 SMART SM00895 89 212 3.4E-18 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_14480 2670d413b6b8805188671c696694d099 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 9.0E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14480 2670d413b6b8805188671c696694d099 245 Gene3D G3DSA:1.20.120.530 83 224 1.3E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 Gene3D G3DSA:3.40.366.10 5 280 6.0E-65 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 Gene3D G3DSA:3.30.70.250 121 190 6.0E-65 T 12-10-2018 ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 SUPERFAMILY SSF55048 123 183 7.06E-12 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 2.8E-18 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 PIRSF PIRSF000446 1 304 4.7E-62 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 Pfam PF00698 Acyl transferase domain 4 284 9.7E-29 T 12-10-2018 IPR014043 Acyl transferase ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 SUPERFAMILY SSF52151 4 290 2.22E-48 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_14280 1378dffa408a7e5e67e0c78909f683df 312 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 299 1.9E-102 T 12-10-2018 IPR017554 Malonate decarboxylase, McdH subunit ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.50.50.60 5 285 6.4E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 6.3E-23 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.3E-23 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.3E-23 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.3E-23 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 6.3E-23 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 5.9E-15 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 5.9E-15 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 5.9E-15 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.9E-15 T 12-10-2018 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 SUPERFAMILY SSF51905 2 310 2.59E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.50.50.60 111 249 6.4E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 4.1E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_09470 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.30.390.120 321 384 3.0E-13 T 12-10-2018 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SMART SM00533 293 604 9.5E-99 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Gene3D G3DSA:3.40.1170.10 5 126 8.4E-49 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Pfam PF01624 MutS domain I 14 124 2.8E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Gene3D G3DSA:3.30.420.110 134 272 7.1E-35 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Pfam PF05190 MutS family domain IV 441 531 2.7E-31 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SUPERFAMILY SSF55271 7 120 6.28E-40 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Pfam PF00488 MutS domain V 624 808 2.1E-80 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Pfam PF05192 MutS domain III 281 572 5.7E-36 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Pfam PF05188 MutS domain II 140 264 2.4E-21 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Gene3D G3DSA:1.10.1420.10 400 516 7.1E-97 T 12-10-2018 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SUPERFAMILY SSF53150 119 277 2.62E-37 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SMART SM00534 620 806 1.3E-111 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 871 24.101 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SUPERFAMILY SSF52540 580 810 1.97E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Gene3D G3DSA:1.10.1420.10 277 572 7.1E-97 T 12-10-2018 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 Gene3D G3DSA:3.40.50.300 581 880 7.2E-98 T 12-10-2018 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 876 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 PIRSF PIRSF037677 7 860 7.1E-149 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 ABD1_12740 e885a7dd69b45117f8b33446f48d3be6 881 SUPERFAMILY SSF48334 278 579 2.35E-83 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABD1_00050 909937332b17d165966d9f2367d08565 130 Pfam PF07361 Cytochrome b562 26 130 2.2E-23 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 ABD1_00050 909937332b17d165966d9f2367d08565 130 PIRSF PIRSF000029 2 130 1.1E-28 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 ABD1_00050 909937332b17d165966d9f2367d08565 130 Gene3D G3DSA:1.20.120.10 20 130 7.1E-35 T 12-10-2018 ABD1_00050 909937332b17d165966d9f2367d08565 130 SUPERFAMILY SSF47175 25 130 5.18E-24 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF52540 1 237 1.12E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.300 3 196 6.3E-9 T 12-10-2018 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.10950 398 707 5.3E-130 T 12-10-2018 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF75138 229 352 5.1E-16 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.1390.20 223 366 6.0E-11 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF13500 AAA domain 3 227 1.0E-22 T 12-10-2018 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF53659 392 708 4.07E-89 T 12-10-2018 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF07085 DRTGG domain 233 344 1.5E-19 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 6.4E-127 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.10750 527 680 5.3E-130 T 12-10-2018 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 8.4E-118 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABD1_04540 7ed4585e6fdbc6facbde61bc3944a473 714 PIRSF PIRSF006107 1 712 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABD1_32030 d90dd040014bb216ce8422dfa68a81c5 180 Pfam PF00857 Isochorismatase family 4 174 3.1E-36 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_32030 d90dd040014bb216ce8422dfa68a81c5 180 Gene3D G3DSA:3.40.50.850 1 180 8.2E-49 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_32030 d90dd040014bb216ce8422dfa68a81c5 180 SUPERFAMILY SSF52499 2 178 8.9E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 396 1.7E-152 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 Gene3D G3DSA:3.90.1150.10 22 389 3.1E-151 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 Pfam PF00202 Aminotransferase class-III 22 396 1.6E-120 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 4 399 9.2E-219 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 399 70.489 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 PIRSF PIRSF000521 24 399 2.0E-40 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 219 256 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 SUPERFAMILY SSF53383 11 398 5.32E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_05420 8ff58916b2232358800ea7de21ba5a9a 401 Gene3D G3DSA:3.40.640.10 56 301 3.1E-151 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_12260 ccfa26b5ee6d38e6e9ad393663111cef 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABD1_12260 ccfa26b5ee6d38e6e9ad393663111cef 64 Gene3D G3DSA:3.30.70.100 1 61 2.2E-18 T 12-10-2018 ABD1_12260 ccfa26b5ee6d38e6e9ad393663111cef 64 Pfam PF00403 Heavy-metal-associated domain 4 58 7.1E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABD1_12260 ccfa26b5ee6d38e6e9ad393663111cef 64 SUPERFAMILY SSF55008 2 62 4.32E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:3.40.190.10 166 267 1.1E-55 T 12-10-2018 ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:3.40.190.10 92 294 1.1E-55 T 12-10-2018 ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 SUPERFAMILY SSF53850 90 299 2.76E-41 T 12-10-2018 ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 Pfam PF03466 LysR substrate binding domain 90 296 6.5E-40 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 SUPERFAMILY SSF46785 4 86 5.9E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_19610 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:1.10.10.10 3 90 8.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 SUPERFAMILY SSF46785 1 60 2.02E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.5E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 Gene3D G3DSA:1.10.10.10 2 51 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 SUPERFAMILY SSF54909 63 146 8.98E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 SMART SM00344 1 110 1.2E-31 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.2E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_24380 d84c206474fcc34877847b6917f3d6cc 161 Gene3D G3DSA:3.30.70.920 52 148 2.3E-23 T 12-10-2018 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 SUPERFAMILY SSF56645 41 280 2.09E-59 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 2.4E-37 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Gene3D G3DSA:2.40.110.10 162 288 6.5E-29 T 12-10-2018 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Gene3D G3DSA:1.20.140.10 289 498 6.6E-41 T 12-10-2018 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 7.1E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 1.4E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 SUPERFAMILY SSF47203 288 476 2.26E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Gene3D G3DSA:1.10.540.10 30 160 3.8E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 8.2E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_28290 baeb351c40a9f14939890bf68718ecbf 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 1.5E-13 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ABD1_11840 45f483e7368fb5bd41c88d05d49841fd 164 SUPERFAMILY SSF51306 38 159 8.2E-31 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_11840 45f483e7368fb5bd41c88d05d49841fd 164 Gene3D G3DSA:2.10.109.10 48 163 5.5E-43 T 12-10-2018 ABD1_11840 45f483e7368fb5bd41c88d05d49841fd 164 Pfam PF00717 Peptidase S24-like 78 144 4.1E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:1.10.1060.10 14 146 1.4E-31 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 135 5.9E-36 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 SUPERFAMILY SSF51971 148 402 8.24E-72 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:3.50.50.60 256 401 1.8E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 2.7E-27 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 SUPERFAMILY SSF46548 10 160 1.2E-37 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:3.40.50.720 147 255 3.6E-19 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 473 5.8E-237 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 3.0E-33 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 3.0E-33 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 3.0E-33 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 3.0E-33 T 12-10-2018 ABD1_30710 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 3.0E-33 T 12-10-2018 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 SMART SM00448 1 111 4.8E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 SMART SM00850 147 244 1.5E-27 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-39 T 12-10-2018 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 Gene3D G3DSA:2.40.50.40 138 206 3.5E-11 T 12-10-2018 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 SUPERFAMILY SSF52172 1 167 5.83E-37 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 Pfam PF00072 Response regulator receiver domain 3 110 9.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02440 c73d05a7209d0eac7abe150d832890b0 246 Pfam PF04397 LytTr DNA-binding domain 150 243 2.5E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABD1_06680 bad068c95d56314bdf414796698b1c6a 440 SUPERFAMILY SSF103473 29 432 2.75E-82 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_06680 bad068c95d56314bdf414796698b1c6a 440 Pfam PF07690 Major Facilitator Superfamily 39 301 2.6E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_06680 bad068c95d56314bdf414796698b1c6a 440 Gene3D G3DSA:1.20.1250.20 28 231 6.7E-40 T 12-10-2018 ABD1_06680 bad068c95d56314bdf414796698b1c6a 440 Gene3D G3DSA:1.20.1250.20 241 435 1.5E-32 T 12-10-2018 ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 Gene3D G3DSA:3.40.50.300 3 242 1.7E-77 T 12-10-2018 ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 Pfam PF00005 ABC transporter 19 167 5.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 SUPERFAMILY SSF52540 3 237 4.02E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 PIRSF PIRSF039085 1 242 1.3E-102 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_14010 c691e109c5efc670b3cea1ddccd0583a 243 SMART SM00382 28 215 2.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_13690 559f163f69798e913861c9b8e2952bc9 300 SUPERFAMILY SSF51569 2 290 1.12E-69 T 12-10-2018 ABD1_13690 559f163f69798e913861c9b8e2952bc9 300 Gene3D G3DSA:3.20.20.70 1 298 1.1E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_13690 559f163f69798e913861c9b8e2952bc9 300 Pfam PF00682 HMGL-like 5 277 7.1E-53 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 SUPERFAMILY SSF50156 269 372 4.99E-23 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 SUPERFAMILY SSF50494 58 281 7.91E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 Gene3D G3DSA:2.40.10.120 58 277 5.8E-77 T 12-10-2018 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 SMART SM00228 284 364 2.7E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 1.1E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 Pfam PF13180 PDZ domain 285 373 2.0E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 Pfam PF13365 Trypsin-like peptidase domain 112 245 1.4E-31 T 12-10-2018 ABD1_23410 5b6ab06c03ee15668ea11c59693b1d9b 391 Gene3D G3DSA:2.30.42.10 279 385 2.5E-23 T 12-10-2018 ABD1_20730 e85ff7bd5174b1a999db53f85d0afb84 351 Pfam PF03922 OmpW family 102 351 6.2E-17 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 ABD1_20730 e85ff7bd5174b1a999db53f85d0afb84 351 SUPERFAMILY SSF56925 109 351 1.83E-17 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABD1_27740 543ba6bc2f7efa97310960ad3a52f9d9 709 Gene3D G3DSA:2.170.130.10 30 172 4.9E-20 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_27740 543ba6bc2f7efa97310960ad3a52f9d9 709 Gene3D G3DSA:2.40.170.20 176 705 6.3E-96 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_27740 543ba6bc2f7efa97310960ad3a52f9d9 709 SUPERFAMILY SSF56935 30 705 1.86E-117 T 12-10-2018 ABD1_27740 543ba6bc2f7efa97310960ad3a52f9d9 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 8.2E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_27740 543ba6bc2f7efa97310960ad3a52f9d9 709 Pfam PF00593 TonB dependent receptor 233 705 3.0E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_23120 9b29d7ed1c9fbeb1a47b30c825f67cba 311 SMART SM00382 30 213 4.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_23120 9b29d7ed1c9fbeb1a47b30c825f67cba 311 Gene3D G3DSA:3.40.50.300 1 236 9.8E-63 T 12-10-2018 ABD1_23120 9b29d7ed1c9fbeb1a47b30c825f67cba 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_23120 9b29d7ed1c9fbeb1a47b30c825f67cba 311 SUPERFAMILY SSF52540 4 228 1.3E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_23120 9b29d7ed1c9fbeb1a47b30c825f67cba 311 Pfam PF00005 ABC transporter 21 165 2.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_30670 75be7c9f532991a931e7ce0f5bc436e1 186 Gene3D G3DSA:3.10.310.50 35 182 1.4E-40 T 12-10-2018 ABD1_30670 75be7c9f532991a931e7ce0f5bc436e1 186 Pfam PF04536 TPM domain 39 161 1.3E-15 T 12-10-2018 IPR007621 TPM domain ABD1_25560 63ceb2c1edea25ea575a429fb92bdb32 232 Gene3D G3DSA:3.40.50.300 29 155 2.1E-22 T 12-10-2018 ABD1_25560 63ceb2c1edea25ea575a429fb92bdb32 232 Pfam PF00308 Bacterial dnaA protein 31 185 1.5E-9 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ABD1_25560 63ceb2c1edea25ea575a429fb92bdb32 232 SUPERFAMILY SSF52540 34 190 2.38E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25560 63ceb2c1edea25ea575a429fb92bdb32 232 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 224 5.9E-59 T 12-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 Gene3D G3DSA:3.90.79.20 3 119 2.5E-21 T 12-10-2018 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 Pfam PF00293 NUDIX domain 126 230 4.1E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 Gene3D G3DSA:3.90.79.10 120 247 3.2E-38 T 12-10-2018 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 SUPERFAMILY SSF55811 72 239 2.88E-44 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_10710 708fda54c7fb273a85bffcf0c065111a 247 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 2.2E-12 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 ABD1_18750 d7b840a5a70a8fd044c73d14bd70f542 495 Gene3D G3DSA:3.40.605.10 34 489 5.1E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_18750 d7b840a5a70a8fd044c73d14bd70f542 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_18750 d7b840a5a70a8fd044c73d14bd70f542 495 Gene3D G3DSA:3.40.309.10 272 460 5.1E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_18750 d7b840a5a70a8fd044c73d14bd70f542 495 SUPERFAMILY SSF53720 8 494 6.41E-151 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_18750 d7b840a5a70a8fd044c73d14bd70f542 495 Pfam PF00171 Aldehyde dehydrogenase family 33 491 1.2E-152 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 SUPERFAMILY SSF51735 3 188 5.23E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 PIRSF PIRSF000105 1 315 9.4E-64 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 SUPERFAMILY SSF48179 191 281 4.25E-12 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 247 1.0E-10 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 Gene3D G3DSA:1.10.1040.10 192 315 1.7E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 Gene3D G3DSA:3.40.50.720 4 191 5.1E-53 T 12-10-2018 ABD1_12840 e6ad66991400ea723f5467d23b40822e 316 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 187 1.0E-46 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Gene3D G3DSA:3.30.450.20 284 392 5.2E-18 T 12-10-2018 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Gene3D G3DSA:3.30.450.20 393 514 2.5E-20 T 12-10-2018 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SMART SM00267 512 684 3.0E-31 T 12-10-2018 IPR000160 GGDEF domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Pfam PF08447 PAS fold 313 380 8.7E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Pfam PF00563 EAL domain 699 933 9.7E-73 T 12-10-2018 IPR001633 EAL domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SUPERFAMILY SSF55785 314 390 8.55E-12 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SUPERFAMILY SSF141868 698 945 9.81E-85 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SMART SM00086 344 388 1.5E-5 T 12-10-2018 IPR001610 PAC motif ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SMART SM00086 470 512 0.045 T 12-10-2018 IPR001610 PAC motif ABD1_23380 739d67a5a34ee825df95a1050c999219 949 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 682 1.3E-22 T 12-10-2018 IPR000160 GGDEF domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SMART SM00052 693 938 1.0E-101 T 12-10-2018 IPR001633 EAL domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SUPERFAMILY SSF55073 528 684 2.9E-33 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Gene3D G3DSA:3.30.70.270 517 696 1.3E-38 T 12-10-2018 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SUPERFAMILY SSF55785 407 519 1.92E-15 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_23380 739d67a5a34ee825df95a1050c999219 949 SMART SM00091 396 464 9.8E-4 T 12-10-2018 IPR000014 PAS domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Gene3D G3DSA:3.20.20.450 697 947 3.7E-95 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Pfam PF00989 PAS fold 401 508 4.7E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 ABD1_23380 739d67a5a34ee825df95a1050c999219 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 519 7.5E-15 T 12-10-2018 IPR000014 PAS domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 314 395 1.2E-7 T 12-10-2018 IPR000014 PAS domain ABD1_23380 739d67a5a34ee825df95a1050c999219 949 Pfam PF00990 Diguanylate cyclase, GGDEF domain 524 679 7.3E-31 T 12-10-2018 IPR000160 GGDEF domain ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 Gene3D G3DSA:3.40.190.10 118 217 5.4E-107 T 12-10-2018 ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 Gene3D G3DSA:1.10.8.450 249 281 5.4E-107 T 12-10-2018 ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 SUPERFAMILY SSF53850 37 268 1.73E-50 T 12-10-2018 ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 Pfam PF09084 NMT1/THI5 like 63 258 1.2E-17 T 12-10-2018 IPR015168 SsuA/THI5-like ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 40 318 9.0E-71 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 Gene3D G3DSA:3.40.190.10 39 311 5.4E-107 T 12-10-2018 ABD1_00280 5cffa3fb0f4af5ecc5da89def5eaead4 322 SMART SM00062 38 254 4.0E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_32570 364bff9196114c99f49a3d75198b5040 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 621 3.2E-287 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 SMART SM00387 26 173 8.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Pfam PF01751 Toprim domain 413 507 1.7E-12 T 12-10-2018 IPR006171 TOPRIM domain ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 555 617 4.6E-23 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.30.565.10 1 215 4.8E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.40.50.670 389 620 2.3E-93 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 4.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_32570 364bff9196114c99f49a3d75198b5040 627 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 581 595 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.6E-94 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF56719 388 618 4.71E-78 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 SMART SM00433 33 621 2.5E-206 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Pfam PF00204 DNA gyrase B 218 385 1.8E-39 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 559 575 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 30 45 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 108 122 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 65 78 4.1E-59 T 12-10-2018 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF54211 217 382 1.44E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.30.230.10 216 388 3.0E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_32570 364bff9196114c99f49a3d75198b5040 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 625 46.512 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_32570 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF55874 3 214 5.76E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_12060 49d4a49ea72496741cddca702f304466 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 75 6.1E-13 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_12060 49d4a49ea72496741cddca702f304466 208 Gene3D G3DSA:3.40.30.10 1 83 1.4E-32 T 12-10-2018 ABD1_12060 49d4a49ea72496741cddca702f304466 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 196 5.1E-5 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_12060 49d4a49ea72496741cddca702f304466 208 Gene3D G3DSA:1.20.1050.10 85 203 5.2E-42 T 12-10-2018 ABD1_12060 49d4a49ea72496741cddca702f304466 208 SUPERFAMILY SSF52833 1 85 2.11E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_12060 49d4a49ea72496741cddca702f304466 208 SUPERFAMILY SSF47616 72 202 1.81E-24 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_29710 1a8f8f8beffc62bbe615eeaf03077700 254 Pfam PF00042 Globin 5 101 2.5E-9 T 12-10-2018 IPR000971 Globin GO:0020037 ABD1_29710 1a8f8f8beffc62bbe615eeaf03077700 254 SUPERFAMILY SSF46458 1 142 1.06E-35 T 12-10-2018 IPR009050 Globin-like superfamily ABD1_29710 1a8f8f8beffc62bbe615eeaf03077700 254 SUPERFAMILY SSF63380 150 251 4.68E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_29710 1a8f8f8beffc62bbe615eeaf03077700 254 Gene3D G3DSA:2.40.30.10 150 253 9.1E-14 T 12-10-2018 ABD1_29710 1a8f8f8beffc62bbe615eeaf03077700 254 Gene3D G3DSA:1.10.490.10 1 149 6.5E-49 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Gene3D G3DSA:3.30.70.100 81 147 9.3E-24 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 784 4.7E-94 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Gene3D G3DSA:3.40.50.1000 488 758 1.8E-92 T 12-10-2018 IPR023214 HAD superfamily ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 720 2.3E-44 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 SUPERFAMILY SSF55008 14 75 7.33E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Gene3D G3DSA:3.40.1110.10 518 638 1.8E-92 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 SUPERFAMILY SSF81665 271 794 7.59E-13 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Pfam PF00403 Heavy-metal-associated domain 14 74 1.1E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Pfam PF00403 Heavy-metal-associated domain 83 142 7.8E-18 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 SUPERFAMILY SSF55008 80 145 3.01E-22 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 8.5E-30 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 815 3.2E-190 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 143 7.2E-14 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 75 1.6E-11 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 SUPERFAMILY SSF81653 307 405 7.85E-29 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Pfam PF00122 E1-E2 ATPase 306 485 9.4E-58 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 2.7E-182 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Gene3D G3DSA:2.70.150.20 298 410 7.4E-40 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 Gene3D G3DSA:3.30.70.100 12 80 7.3E-20 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 295 313 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 223 242 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 683 700 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 123 143 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 275 294 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 PRINTS PR00943 Copper-transporting ATPase signature 428 442 6.0E-14 T 12-10-2018 ABD1_12270 9a3ba429b2de927df4dbb221dd0e6e4f 823 SUPERFAMILY SSF56784 505 813 3.96E-62 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_22120 e0926429989e872f33ac836dc3ecd20a 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 43 153 3.3E-20 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ABD1_22120 e0926429989e872f33ac836dc3ecd20a 273 Gene3D G3DSA:2.60.40.10 37 157 7.3E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_22120 e0926429989e872f33ac836dc3ecd20a 273 SUPERFAMILY SSF49354 28 157 2.41E-25 T 12-10-2018 IPR008962 PapD-like superfamily ABD1_22990 17d7cf276696ac85bbdfcd589ac16e81 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 228 9.0E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_22990 17d7cf276696ac85bbdfcd589ac16e81 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.3E-14 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_22990 17d7cf276696ac85bbdfcd589ac16e81 237 Gene3D G3DSA:1.10.3720.10 9 229 5.6E-43 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_22990 17d7cf276696ac85bbdfcd589ac16e81 237 SUPERFAMILY SSF161098 17 220 5.23E-34 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 SUPERFAMILY SSF143975 5 421 9.29E-148 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 605 1.1E-297 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 SUPERFAMILY SSF52016 422 604 7.85E-53 T 12-10-2018 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 Pfam PF00920 Dehydratase family 69 602 1.3E-162 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 Gene3D G3DSA:3.50.30.80 422 572 2.7E-48 T 12-10-2018 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 4 606 58.146 T 12-10-2018 ABD1_04560 31f79aa99cc48ddfd60f00c7c412bb1a 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF51215 26 152 3.27E-20 T 12-10-2018 IPR037923 Transcription regulator HTH-like ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 Gene3D G3DSA:1.10.10.60 168 229 5.8E-18 T 12-10-2018 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 Pfam PF12833 Helix-turn-helix domain 193 269 9.3E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF46689 172 221 9.41E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF46689 224 270 6.42E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 1.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 1.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 SMART SM00342 187 269 5.5E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 Gene3D G3DSA:1.10.10.60 230 273 1.1E-14 T 12-10-2018 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 Pfam PF02311 AraC-like ligand binding domain 15 142 1.0E-22 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABD1_23210 c01f53e641316bbad6205647b9c982b8 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_12940 ce34fd418919b428a263a70389f667a4 528 Gene3D G3DSA:2.40.100.10 404 523 1.2E-38 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_12940 ce34fd418919b428a263a70389f667a4 528 SUPERFAMILY SSF160467 2 84 2.48E-8 T 12-10-2018 ABD1_12940 ce34fd418919b428a263a70389f667a4 528 Gene3D G3DSA:2.40.100.10 74 204 5.5E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_12940 ce34fd418919b428a263a70389f667a4 528 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 192 4.9E-57 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABD1_12940 ce34fd418919b428a263a70389f667a4 528 Gene3D G3DSA:3.30.1360.40 4 72 9.7E-12 T 12-10-2018 ABD1_12940 ce34fd418919b428a263a70389f667a4 528 SMART SM00797 250 528 3.8E-91 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_12940 ce34fd418919b428a263a70389f667a4 528 SUPERFAMILY SSF50891 81 205 3.6E-35 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_12940 ce34fd418919b428a263a70389f667a4 528 SUPERFAMILY SSF50891 406 519 7.59E-16 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_12940 ce34fd418919b428a263a70389f667a4 528 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 230 518 3.0E-72 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_12940 ce34fd418919b428a263a70389f667a4 528 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 251 516 2.1E-72 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_12940 ce34fd418919b428a263a70389f667a4 528 SMART SM00796 1 192 2.5E-71 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABD1_31340 486bf311200af2b654f9263d8ac03c45 220 Pfam PF01965 DJ-1/PfpI family 78 145 1.7E-7 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABD1_31340 486bf311200af2b654f9263d8ac03c45 220 Gene3D G3DSA:3.40.50.880 1 220 2.0E-82 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_31340 486bf311200af2b654f9263d8ac03c45 220 SUPERFAMILY SSF52317 1 199 1.24E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 Gene3D G3DSA:2.40.170.20 195 754 8.5E-58 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 Gene3D G3DSA:2.170.130.10 45 176 1.9E-16 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 91 737 7.5E-74 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 SUPERFAMILY SSF56935 56 754 1.5E-87 T 12-10-2018 ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 171 2.9E-15 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_20810 20704ac967890e0af0e15b221ed0cbd7 755 Pfam PF00593 TonB dependent receptor 265 730 8.8E-37 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_29300 39b1e2c7c5fcdf0d32031b5fc70eb61d 679 Gene3D G3DSA:1.10.1370.10 140 604 6.1E-246 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ABD1_29300 39b1e2c7c5fcdf0d32031b5fc70eb61d 679 Gene3D G3DSA:1.10.1370.40 12 669 6.1E-246 T 12-10-2018 ABD1_29300 39b1e2c7c5fcdf0d32031b5fc70eb61d 679 SUPERFAMILY SSF55486 9 671 3.77E-189 T 12-10-2018 ABD1_29300 39b1e2c7c5fcdf0d32031b5fc70eb61d 679 Pfam PF01432 Peptidase family M3 221 670 1.5E-150 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 SUPERFAMILY SSF69065 1 89 7.5E-19 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 Gene3D G3DSA:1.10.1520.10 1 79 4.0E-15 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 Pfam PF14622 Ribonuclease-III-like 2 71 2.6E-15 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 Pfam PF00035 Double-stranded RNA binding motif 87 153 9.5E-12 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 Gene3D G3DSA:3.30.160.20 85 155 8.0E-19 T 12-10-2018 ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 SMART SM00358 87 154 2.4E-18 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain ABD1_25060 97c19684a42584a1c7500bb80cd14253 155 SUPERFAMILY SSF54768 39 153 1.89E-27 T 12-10-2018 ABD1_27640 859f014506290920a0a834d482ec66a2 571 SUPERFAMILY SSF55681 10 481 2.11E-105 T 12-10-2018 ABD1_27640 859f014506290920a0a834d482ec66a2 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 1.0E-48 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_27640 859f014506290920a0a834d482ec66a2 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.6 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABD1_27640 859f014506290920a0a834d482ec66a2 571 SUPERFAMILY SSF55826 218 393 1.31E-23 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABD1_27640 859f014506290920a0a834d482ec66a2 571 Gene3D G3DSA:3.40.50.800 4 557 3.0E-238 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily ABD1_27640 859f014506290920a0a834d482ec66a2 571 Gene3D G3DSA:3.90.960.10 240 392 3.0E-238 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABD1_27640 859f014506290920a0a834d482ec66a2 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 4.9E-255 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABD1_27640 859f014506290920a0a834d482ec66a2 571 SUPERFAMILY SSF52954 466 570 1.27E-29 T 12-10-2018 ABD1_27640 859f014506290920a0a834d482ec66a2 571 Pfam PF03129 Anticodon binding domain 479 569 6.1E-19 T 12-10-2018 IPR004154 Anticodon-binding ABD1_27640 859f014506290920a0a834d482ec66a2 571 Gene3D G3DSA:3.30.930.10 11 468 3.0E-238 T 12-10-2018 ABD1_27640 859f014506290920a0a834d482ec66a2 571 PIRSF PIRSF001535 1 571 1.0E-264 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABD1_27640 859f014506290920a0a834d482ec66a2 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.7E-18 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABD1_27640 859f014506290920a0a834d482ec66a2 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.7E-18 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABD1_27640 859f014506290920a0a834d482ec66a2 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.7E-18 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABD1_27640 859f014506290920a0a834d482ec66a2 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.7E-18 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABD1_27640 859f014506290920a0a834d482ec66a2 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 2.7E-21 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 SUPERFAMILY SSF54631 93 202 1.02E-26 T 12-10-2018 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00571 CBS domain 157 203 8.7E-4 T 12-10-2018 IPR000644 CBS domain ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00571 CBS domain 89 137 6.6E-11 T 12-10-2018 IPR000644 CBS domain ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 Gene3D G3DSA:3.20.20.70 2 487 2.3E-207 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 1.8E-159 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.775 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 PIRSF PIRSF000130 1 488 3.0E-202 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 SUPERFAMILY SSF51412 2 478 1.83E-125 T 12-10-2018 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM00116 96 143 2.7E-9 T 12-10-2018 IPR000644 CBS domain ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM00116 157 205 1.7E-5 T 12-10-2018 IPR000644 CBS domain ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.4E-186 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABD1_32160 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM01240 7 474 0.0 T 12-10-2018 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 SUPERFAMILY SSF54506 3 276 5.5E-57 T 12-10-2018 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 Gene3D G3DSA:3.10.310.10 4 272 2.3E-111 T 12-10-2018 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.343 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.3E-95 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 Gene3D G3DSA:3.10.310.10 117 263 2.3E-111 T 12-10-2018 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 Pfam PF01678 Diaminopimelate epimerase 5 125 7.2E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABD1_25840 feb6f52c53ee47ad73c619b1d4d0045e 281 Pfam PF01678 Diaminopimelate epimerase 155 268 1.2E-28 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABD1_05340 0f996eb4659f50b703e1b6601e319c8e 163 Gene3D G3DSA:1.10.3190.10 54 163 1.1E-27 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily ABD1_05340 0f996eb4659f50b703e1b6601e319c8e 163 Pfam PF03887 YfbU domain 4 161 5.1E-32 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU ABD1_05340 0f996eb4659f50b703e1b6601e319c8e 163 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 5 162 8.0E-15 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU ABD1_05340 0f996eb4659f50b703e1b6601e319c8e 163 SUPERFAMILY SSF116960 3 162 2.09E-46 T 12-10-2018 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 SUPERFAMILY SSF51735 141 342 4.68E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Gene3D G3DSA:3.90.180.10 327 366 2.3E-14 T 12-10-2018 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Gene3D G3DSA:3.90.180.10 16 152 7.7E-51 T 12-10-2018 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Gene3D G3DSA:3.40.50.720 153 227 7.7E-51 T 12-10-2018 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 SUPERFAMILY SSF50129 9 174 9.59E-28 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Gene3D G3DSA:3.40.50.720 272 324 2.3E-14 T 12-10-2018 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Pfam PF00107 Zinc-binding dehydrogenase 175 340 2.6E-13 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_06640 9845554588dc530ab81ab17980f59a85 391 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 102 7.3E-11 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_13100 4410c5b4f81ef730f519d89bce7482fd 144 SUPERFAMILY SSF47598 5 50 8.15E-7 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ABD1_13100 4410c5b4f81ef730f519d89bce7482fd 144 SUPERFAMILY SSF55021 55 134 4.81E-17 T 12-10-2018 ABD1_13100 4410c5b4f81ef730f519d89bce7482fd 144 Gene3D G3DSA:1.10.1220.10 7 52 3.1E-7 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ABD1_13100 4410c5b4f81ef730f519d89bce7482fd 144 Gene3D G3DSA:3.30.70.1150 53 136 7.3E-20 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ABD1_13100 4410c5b4f81ef730f519d89bce7482fd 144 Pfam PF08753 NikR C terminal nickel binding domain 57 132 6.5E-19 T 12-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 Gene3D G3DSA:2.40.420.20 77 384 1.0E-62 T 12-10-2018 ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 Gene3D G3DSA:2.40.30.170 88 321 1.0E-62 T 12-10-2018 ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 90 313 7.7E-33 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 Gene3D G3DSA:2.40.50.100 102 241 1.0E-62 T 12-10-2018 ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 393 5.8E-41 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 Gene3D G3DSA:1.10.287.470 136 206 1.0E-62 T 12-10-2018 ABD1_30990 3453ea8dc2dbbcfd5148bd27620be80e 405 SUPERFAMILY SSF111369 99 321 1.83E-22 T 12-10-2018 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Pfam PF00970 Oxidoreductase FAD-binding domain 17 103 2.2E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 352 6.3E-131 T 12-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 7.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 7.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 7.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 7.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Gene3D G3DSA:2.40.30.10 2 104 3.1E-23 T 12-10-2018 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 SUPERFAMILY SSF54292 236 350 4.04E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 SUPERFAMILY SSF52343 93 242 7.73E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Pfam PF00175 Oxidoreductase NAD-binding domain 118 226 1.7E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Gene3D G3DSA:3.10.20.30 245 353 7.0E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 343 4.8E-18 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 SUPERFAMILY SSF63380 2 104 6.97E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_13490 31802b9e868a6a2f2743c3b67928647c 353 Gene3D G3DSA:3.40.50.80 112 244 4.4E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 Gene3D G3DSA:3.20.20.70 5 264 4.1E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 259 56.937 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 SUPERFAMILY SSF51351 7 260 4.97E-80 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 250 3.7E-52 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 ProSitePatterns PS00171 Triosephosphate isomerase active site. 177 187 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_03060 9e4860fe3819cbcafd223fd681977e83 264 Pfam PF00121 Triosephosphate isomerase 9 257 4.9E-81 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_31950 0532c53f6f8c3c0e5912f40afb4541e0 571 Pfam PF00474 Sodium:solute symporter family 68 489 4.5E-112 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABD1_31950 0532c53f6f8c3c0e5912f40afb4541e0 571 Gene3D G3DSA:1.20.1730.10 56 568 2.4E-62 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily ABD1_31950 0532c53f6f8c3c0e5912f40afb4541e0 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 1.1E-62 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABD1_31950 0532c53f6f8c3c0e5912f40afb4541e0 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site ABD1_18970 23665d3a0f24e7305f79099dc1bceb39 288 Gene3D G3DSA:3.60.15.10 2 288 2.1E-102 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_18970 23665d3a0f24e7305f79099dc1bceb39 288 SUPERFAMILY SSF56281 9 288 4.47E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_18970 23665d3a0f24e7305f79099dc1bceb39 288 Pfam PF00753 Metallo-beta-lactamase superfamily 15 205 3.8E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_18970 23665d3a0f24e7305f79099dc1bceb39 288 SMART SM00849 15 205 2.2E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 Gene3D G3DSA:3.40.640.10 60 308 2.2E-124 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 Gene3D G3DSA:3.90.1150.10 26 391 2.2E-124 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 68.491 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 Pfam PF00202 Aminotransferase class-III 26 396 3.8E-101 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 PIRSF PIRSF000521 12 163 5.8E-11 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 PIRSF PIRSF000521 173 401 6.8E-34 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 SUPERFAMILY SSF53383 14 398 1.04E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_19580 67b20e10c156eefaf28ac7ce68238d90 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 397 3.5E-130 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_00930 5aaa2522f36fd824a4916eef038cbe5a 126 Gene3D G3DSA:3.10.450.50 3 126 2.7E-21 T 12-10-2018 ABD1_00930 5aaa2522f36fd824a4916eef038cbe5a 126 Pfam PF12680 SnoaL-like domain 10 107 1.1E-9 T 12-10-2018 IPR037401 SnoaL-like domain ABD1_00930 5aaa2522f36fd824a4916eef038cbe5a 126 SUPERFAMILY SSF54427 2 114 2.23E-18 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 Pfam PF03466 LysR substrate binding domain 88 276 7.3E-26 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 Gene3D G3DSA:3.40.190.290 92 278 1.3E-29 T 12-10-2018 ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 SUPERFAMILY SSF53850 88 281 2.9E-30 T 12-10-2018 ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 SUPERFAMILY SSF46785 1 112 2.9E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_15060 17cbe34db807ae4b063fd885b26e8dd5 283 Gene3D G3DSA:1.10.10.10 2 91 6.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_32120 817410024bf21252597050f479d34be1 255 Pfam PF16956 Putative general bacterial porin 1 149 7.2E-19 T 12-10-2018 IPR031593 Putative general bacterial porin ABD1_32120 817410024bf21252597050f479d34be1 255 Pfam PF16956 Putative general bacterial porin 166 244 2.1E-6 T 12-10-2018 IPR031593 Putative general bacterial porin ABD1_32120 817410024bf21252597050f479d34be1 255 SUPERFAMILY SSF56935 30 255 3.89E-7 T 12-10-2018 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 11 42 6.7E-15 T 12-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 Pfam PF00775 Dioxygenase 47 229 1.0E-45 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 8.6E-107 T 12-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 SUPERFAMILY SSF49482 9 238 5.1E-73 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_19060 ed86bf194ddc857cbebbad7404858f0b 241 Gene3D G3DSA:2.60.130.10 1 241 1.5E-101 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 328 369 2.0E-13 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Pfam PF09179 TilS substrate binding domain 203 270 8.4E-12 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Gene3D G3DSA:3.40.50.620 2 189 6.9E-54 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 SUPERFAMILY SSF82829 191 274 4.71E-20 T 12-10-2018 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 SUPERFAMILY SSF52402 6 188 3.84E-41 T 12-10-2018 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 SMART SM00977 324 399 1.7E-8 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 SUPERFAMILY SSF56037 291 394 2.01E-15 T 12-10-2018 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Pfam PF01171 PP-loop family 7 155 5.3E-40 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 262 16.526 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Gene3D G3DSA:1.20.59.20 190 273 1.6E-13 T 12-10-2018 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 Pfam PF11734 TilS substrate C-terminal domain 325 385 6.5E-8 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_06150 8d0f31eab5bf5f28a8b7645490bab207 418 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 5 159 2.0E-40 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Gene3D G3DSA:3.90.480.10 53 387 1.4E-76 T 12-10-2018 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 5.0E-16 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 396 1.8E-16 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 SUPERFAMILY SSF55124 1 125 2.78E-28 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 4.3E-40 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 544 4.0E-11 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 SUPERFAMILY SSF56014 405 546 1.96E-39 T 12-10-2018 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Gene3D G3DSA:3.30.413.10 119 315 1.4E-76 T 12-10-2018 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 SUPERFAMILY SSF55124 253 419 2.13E-25 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 SUPERFAMILY SSF56014 120 279 1.23E-43 T 12-10-2018 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 Gene3D G3DSA:3.30.413.10 406 547 1.3E-32 T 12-10-2018 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 PRINTS PR00397 Sirohaem Fe-binding site signature 408 426 5.8E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_27920 66c9aa2a31295bcf8ea9849636b70bc5 547 PRINTS PR00397 Sirohaem Fe-binding site signature 454 472 5.8E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 SUPERFAMILY SSF46689 289 339 1.86E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 Pfam PF14525 AraC-binding-like domain 39 213 4.0E-38 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 Gene3D G3DSA:1.10.10.60 237 340 1.2E-34 T 12-10-2018 ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 Pfam PF12833 Helix-turn-helix domain 258 337 3.6E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 SMART SM00342 252 336 3.7E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17380 070417b40a9a86d46a9a86ecd9ba2290 352 SUPERFAMILY SSF46689 238 286 3.58E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Gene3D G3DSA:2.40.420.20 370 441 6.8E-7 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Gene3D G3DSA:2.40.50.100 60 222 2.0E-77 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Gene3D G3DSA:2.40.30.170 49 312 2.0E-77 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Gene3D G3DSA:2.40.420.20 44 330 2.0E-77 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 SUPERFAMILY SSF111369 52 247 2.22E-22 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Gene3D G3DSA:1.10.287.470 94 185 2.0E-77 T 12-10-2018 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 329 2.3E-39 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_05070 0b87b17cf54c9a7559379b15d93a267e 446 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 250 2.9E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 69.156 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 Pfam PF01761 3-dehydroquinate synthase 66 323 2.0E-106 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 Gene3D G3DSA:1.20.1090.10 172 360 7.2E-75 T 12-10-2018 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 Gene3D G3DSA:3.40.50.1970 1 171 1.3E-65 T 12-10-2018 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 352 3.1E-113 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 PIRSF PIRSF001455 7 359 1.1E-103 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABD1_30740 6ad7589ffba66a50243c873384d4de6a 360 SUPERFAMILY SSF56796 3 354 5.76E-111 T 12-10-2018 ABD1_02240 70935016acecc196012c6137053b1398 271 Gene3D G3DSA:3.40.30.10 120 271 6.9E-40 T 12-10-2018 ABD1_02240 70935016acecc196012c6137053b1398 271 Gene3D G3DSA:3.10.450.70 57 119 9.3E-8 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_02240 70935016acecc196012c6137053b1398 271 SUPERFAMILY SSF54423 66 117 9.16E-10 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_02240 70935016acecc196012c6137053b1398 271 SUPERFAMILY SSF52833 130 271 1.68E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_02240 70935016acecc196012c6137053b1398 271 Pfam PF10411 Disulfide bond isomerase protein N-terminus 62 115 3.9E-14 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ABD1_02240 70935016acecc196012c6137053b1398 271 Pfam PF13098 Thioredoxin-like domain 150 269 1.1E-25 T 12-10-2018 IPR012336 Thioredoxin-like fold ABD1_12520 c4762e06ba8868d4aa2e7bf8fd9c10f5 197 Pfam PF13628 Domain of unknown function (DUF4142) 52 192 1.1E-22 T 12-10-2018 IPR025419 Domain of unknown function DUF4142 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 SUPERFAMILY SSF48173 200 478 1.7E-108 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 Gene3D G3DSA:1.25.40.80 136 297 7.9E-74 T 12-10-2018 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 PRINTS PR00147 DNA photolyase signature 356 374 1.2E-23 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 PRINTS PR00147 DNA photolyase signature 395 409 1.2E-23 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 PRINTS PR00147 DNA photolyase signature 145 161 1.2E-23 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 PRINTS PR00147 DNA photolyase signature 336 352 1.2E-23 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 Pfam PF03441 FAD binding domain of DNA photolyase 286 478 6.9E-83 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 336 348 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 Gene3D G3DSA:3.40.50.620 7 213 7.9E-74 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 SUPERFAMILY SSF52425 5 193 4.45E-46 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 Pfam PF00875 DNA photolyase 7 171 3.9E-39 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 ABD1_24720 3b361b2cac2c1235ee40319e7a407ecc 480 Gene3D G3DSA:1.10.579.10 304 480 1.2E-80 T 12-10-2018 ABD1_09520 4071683e7c250fc60c272ff967866aba 485 Gene3D G3DSA:2.40.160.130 22 480 1.8E-161 T 12-10-2018 IPR038636 Capsule assembly protein Wzi superfamily ABD1_09520 4071683e7c250fc60c272ff967866aba 485 Pfam PF14052 Capsule assembly protein Wzi 89 471 6.9E-116 T 12-10-2018 IPR026950 Capsule assembly protein Wzi ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Gene3D G3DSA:3.40.50.620 38 582 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Gene3D G3DSA:3.90.740.10 233 428 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Gene3D G3DSA:3.10.330.110 583 645 0.0 T 12-10-2018 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 SUPERFAMILY SSF50677 232 428 1.15E-51 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 9 874 22.964 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Gene3D G3DSA:3.10.20.590 815 874 2.7E-19 T 12-10-2018 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 132 149 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 158 174 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 190 203 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 1.3E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 5.8E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 432 588 8.1E-8 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Gene3D G3DSA:1.10.730.10 14 807 0.0 T 12-10-2018 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 SUPERFAMILY SSF47323 679 874 7.66E-27 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Pfam PF09334 tRNA synthetases class I (M) 41 177 3.7E-19 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 417 3.7E-73 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 SUPERFAMILY SSF52374 10 685 6.26E-144 T 12-10-2018 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 10 874 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABD1_05100 97f4406655ac299949e51ee7b012be99 874 Pfam PF08264 Anticodon-binding domain of tRNA 718 835 1.1E-13 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABD1_24270 ce3b3d77cc5505333307c199bbe5bf2e 244 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 230 9.0E-106 T 12-10-2018 ABD1_24270 ce3b3d77cc5505333307c199bbe5bf2e 244 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 238 27.214 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD ABD1_24270 ce3b3d77cc5505333307c199bbe5bf2e 244 SUPERFAMILY SSF101322 13 237 9.94E-52 T 12-10-2018 IPR035932 HflD-like superfamily ABD1_24270 ce3b3d77cc5505333307c199bbe5bf2e 244 Pfam PF04356 Protein of unknown function (DUF489) 17 231 1.9E-54 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD ABD1_24270 ce3b3d77cc5505333307c199bbe5bf2e 244 Gene3D G3DSA:1.10.3890.10 12 243 4.2E-59 T 12-10-2018 IPR035932 HflD-like superfamily ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 Pfam PF00696 Amino acid kinase family 15 244 1.3E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 Pfam PF01472 PUA domain 286 360 2.7E-20 T 12-10-2018 IPR002478 PUA domain GO:0003723 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 Gene3D G3DSA:2.30.130.10 275 377 1.2E-30 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 SUPERFAMILY SSF88697 286 376 3.31E-20 T 12-10-2018 IPR015947 PUA-like superfamily ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 SUPERFAMILY SSF53633 15 265 5.11E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 Gene3D G3DSA:3.40.1160.10 5 274 3.3E-94 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 1.9E-128 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 SMART SM00359 286 369 1.2E-12 T 12-10-2018 IPR002478 PUA domain GO:0003723 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PIRSF PIRSF000729 10 377 2.5E-130 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.788 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 3.2E-48 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 3.2E-48 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 3.2E-48 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 3.2E-48 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABD1_24850 972e01c64cefdf1842b74d4c6b26aeb5 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 3.2E-48 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABD1_20350 b229082c2368b007e04cff0d80333696 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 2.0E-66 T 12-10-2018 ABD1_20350 b229082c2368b007e04cff0d80333696 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 144 1.8E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 Pfam PF01220 Dehydroquinase class II 5 141 5.8E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 SUPERFAMILY SSF52304 4 146 3.27E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 72.729 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 PIRSF PIRSF001399 1 148 2.1E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_20350 b229082c2368b007e04cff0d80333696 151 Gene3D G3DSA:3.40.50.9100 1 151 1.5E-68 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 Gene3D G3DSA:3.90.230.10 4 256 8.9E-107 T 12-10-2018 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 3.0E-98 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 41.302 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 Pfam PF00557 Metallopeptidase family M24 15 245 2.3E-51 T 12-10-2018 IPR000994 Peptidase M24 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 SUPERFAMILY SSF55920 7 257 4.97E-90 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 4.7E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 4.7E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 4.7E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_19620 8f5b87b3aa2172477d8bd3962eb1e2da 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 4.7E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 1.7E-62 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.9E-16 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 9.9E-16 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 9.9E-16 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 Pfam PF02357 Transcription termination factor nusG 2 107 1.1E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 SMART SM00738 1 110 1.7E-43 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 Gene3D G3DSA:2.30.30.30 118 175 1.2E-19 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 SMART SM00739 122 149 0.0029 T 12-10-2018 IPR005824 KOW ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 Gene3D G3DSA:3.30.70.940 1 117 5.7E-46 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 SUPERFAMILY SSF50104 120 175 4.21E-15 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.877 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABD1_02590 a787310025a76be0e52b2f12f99ad9be 177 SUPERFAMILY SSF82679 1 112 1.31E-37 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.2E-30 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.8E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 SUPERFAMILY SSF47336 2 77 1.31E-22 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-25 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 3.0E-14 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABD1_07750 46c6b674ae989f0d3640552aaf9543bf 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.511 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 SUPERFAMILY SSF55347 292 455 2.74E-55 T 12-10-2018 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 SMART SM00846 131 292 1.1E-51 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 2.6E-47 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 Gene3D G3DSA:3.40.50.720 133 467 3.4E-114 T 12-10-2018 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 SUPERFAMILY SSF51735 132 308 9.98E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.6E-19 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.6E-19 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.6E-19 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.6E-19 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 1.6E-19 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 5.4E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 2.3E-112 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_24890 fef07aa052accfe745c3d681ecbb49fe 485 Gene3D G3DSA:3.30.360.10 291 456 3.4E-114 T 12-10-2018 ABD1_07040 5d055870490ce58069bb816bedd13784 183 Gene3D G3DSA:1.20.58.1610 2 121 6.9E-31 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07040 5d055870490ce58069bb816bedd13784 183 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 3.0E-25 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07040 5d055870490ce58069bb816bedd13784 183 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 17.894 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Gene3D G3DSA:3.30.465.10 73 222 8.8E-51 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Gene3D G3DSA:3.30.43.10 1 72 1.0E-22 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Gene3D G3DSA:3.90.78.10 223 341 7.6E-41 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 2.2E-66 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 75.278 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Pfam PF01565 FAD binding domain 23 145 1.5E-22 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 4.9E-31 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 SUPERFAMILY SSF56194 208 335 4.05E-44 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_20460 58384acb393d2083e4e0cb8fe564e798 344 SUPERFAMILY SSF56176 9 195 7.48E-38 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_17440 ccea2a3b29ef09ce87ecee376dd056e2 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 222 4.4E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_17440 ccea2a3b29ef09ce87ecee376dd056e2 230 Gene3D G3DSA:1.10.3720.10 2 226 2.3E-53 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_17440 ccea2a3b29ef09ce87ecee376dd056e2 230 SUPERFAMILY SSF161098 7 220 2.49E-46 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_17440 ccea2a3b29ef09ce87ecee376dd056e2 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 215 1.4E-65 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Pfam PF13538 UvrD-like helicase C-terminal domain 507 552 1.2E-12 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 SUPERFAMILY SSF52540 126 558 1.18E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 58 578 3.3E-122 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Gene3D G3DSA:3.40.50.300 451 567 2.1E-22 T 12-10-2018 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Gene3D G3DSA:3.40.50.300 314 447 3.0E-12 T 12-10-2018 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Gene3D G3DSA:3.40.50.300 92 313 1.3E-52 T 12-10-2018 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Pfam PF13604 AAA domain 126 321 3.7E-33 T 12-10-2018 ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 SMART SM00382 138 328 0.0086 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_03300 7585d95307d6bfd05d1bd23dc3af4682 583 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 576 40.999 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ABD1_13140 431c169aa43a996104c6d09da896c3cc 314 SUPERFAMILY SSF161098 113 299 3.53E-31 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_13140 431c169aa43a996104c6d09da896c3cc 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 299 1.0E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_13140 431c169aa43a996104c6d09da896c3cc 314 Gene3D G3DSA:1.10.3720.10 113 306 2.4E-26 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_13570 2fe8488285508c4537f9adf362cd3c1c 127 Pfam PF03061 Thioesterase superfamily 43 110 1.7E-6 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_13570 2fe8488285508c4537f9adf362cd3c1c 127 Gene3D G3DSA:3.10.129.10 2 127 6.1E-32 T 12-10-2018 ABD1_13570 2fe8488285508c4537f9adf362cd3c1c 127 SUPERFAMILY SSF54637 9 124 2.68E-23 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_13570 2fe8488285508c4537f9adf362cd3c1c 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 123 8.9E-19 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABD1_13480 63233557e338b0bada88a90f3b0077ef 166 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 166 3.1E-56 T 12-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit ABD1_13480 63233557e338b0bada88a90f3b0077ef 166 Gene3D G3DSA:3.30.300.130 4 104 8.3E-26 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABD1_13480 63233557e338b0bada88a90f3b0077ef 166 Pfam PF01883 Iron-sulfur cluster assembly protein 10 71 7.5E-14 T 12-10-2018 IPR002744 MIP18 family-like ABD1_13480 63233557e338b0bada88a90f3b0077ef 166 SUPERFAMILY SSF117916 8 102 2.65E-24 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABD1_01380 6ed4ee9db1681a2078bd0b8092aa0532 315 Gene3D G3DSA:2.60.120.10 20 263 4.1E-63 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_01380 6ed4ee9db1681a2078bd0b8092aa0532 315 PIRSF PIRSF006232 19 298 5.3E-74 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABD1_01380 6ed4ee9db1681a2078bd0b8092aa0532 315 Pfam PF05726 Pirin C-terminal cupin domain 190 287 1.3E-17 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 ABD1_01380 6ed4ee9db1681a2078bd0b8092aa0532 315 Pfam PF02678 Pirin 40 138 6.2E-29 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABD1_01380 6ed4ee9db1681a2078bd0b8092aa0532 315 SUPERFAMILY SSF51182 34 297 2.89E-69 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_26330 132fa03f96be73daadf3cf7db04fe4e7 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 3.2E-58 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ABD1_26330 132fa03f96be73daadf3cf7db04fe4e7 216 SUPERFAMILY SSF53335 34 212 3.08E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_26330 132fa03f96be73daadf3cf7db04fe4e7 216 PIRSF PIRSF005461 3 216 2.0E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 ABD1_26330 132fa03f96be73daadf3cf7db04fe4e7 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.905 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 ABD1_26330 132fa03f96be73daadf3cf7db04fe4e7 216 Gene3D G3DSA:3.40.50.150 31 215 8.3E-61 T 12-10-2018 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.3380 377 487 2.0E-38 T 12-10-2018 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF54980 301 379 9.71E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF54980 408 502 1.1E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 SMART SM00838 407 492 0.0023 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 2.3E-51 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF00679 Elongation factor G C-terminus 408 493 4.6E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 1.1E-287 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.2570 488 562 1.4E-32 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 8.0E-50 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.870 295 376 4.0E-34 T 12-10-2018 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.40.50.300 8 194 2.2E-68 T 12-10-2018 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.2E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:2.40.30.10 195 293 4.0E-32 T 12-10-2018 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 180 8.1E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF52540 6 237 9.5E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25090 b3664ca1a3ed997e347d28ef6d05ff86 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 291.116 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Pfam PF07729 FCD domain 82 202 5.0E-11 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SMART SM00345 13 71 2.6E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SUPERFAMILY SSF46785 3 75 5.61E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Gene3D G3DSA:1.10.10.10 5 73 1.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SUPERFAMILY SSF48008 81 213 2.62E-6 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_07530 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Gene3D G3DSA:1.20.120.530 74 215 3.8E-10 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 349 9.5E-115 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 Gene3D G3DSA:3.40.50.10800 124 346 2.0E-97 T 12-10-2018 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 Pfam PF02445 Quinolinate synthetase A protein 41 347 7.9E-105 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 Gene3D G3DSA:3.40.50.10800 41 329 2.0E-97 T 12-10-2018 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 Gene3D G3DSA:3.40.50.10800 209 304 2.0E-97 T 12-10-2018 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 354 67.98 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABD1_06620 cb29438b67d0ebbd67d75ad74ba6c34b 354 SUPERFAMILY SSF142754 39 348 3.4E-109 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABD1_06880 85f5de4891805b8bad85ce9fbfcff6d7 396 Pfam PF13394 4Fe-4S single cluster domain 113 198 4.4E-8 T 12-10-2018 ABD1_06880 85f5de4891805b8bad85ce9fbfcff6d7 396 Gene3D G3DSA:3.20.20.70 107 367 9.0E-24 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_06880 85f5de4891805b8bad85ce9fbfcff6d7 396 Pfam PF04055 Radical SAM superfamily 115 260 1.8E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_06880 85f5de4891805b8bad85ce9fbfcff6d7 396 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 85 374 1.0E-103 T 12-10-2018 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC ABD1_06880 85f5de4891805b8bad85ce9fbfcff6d7 396 SUPERFAMILY SSF102114 112 370 2.35E-22 T 12-10-2018 ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 SUPERFAMILY SSF48403 16 126 3.11E-24 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 SMART SM00248 77 106 1200.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 SMART SM00248 44 73 0.0022 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 SMART SM00248 11 40 330.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 Pfam PF12796 Ankyrin repeats (3 copies) 18 105 1.9E-11 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain ABD1_32830 ce062f679a985cc8cbabc99fcdcc1796 136 Gene3D G3DSA:1.25.40.20 6 134 3.3E-23 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 Pfam PF00571 CBS domain 16 59 1.4E-9 T 12-10-2018 IPR000644 CBS domain ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 Pfam PF00571 CBS domain 73 127 2.4E-13 T 12-10-2018 IPR000644 CBS domain ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 SUPERFAMILY SSF54631 15 128 1.52E-33 T 12-10-2018 ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 Gene3D G3DSA:3.10.580.10 1 143 3.3E-45 T 12-10-2018 ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 SMART SM00116 80 127 3.0E-9 T 12-10-2018 IPR000644 CBS domain ABD1_19570 0b3d9d626a2b311f9c35222c8a11b0b7 143 SMART SM00116 15 62 1.7E-6 T 12-10-2018 IPR000644 CBS domain ABD1_16340 8d311fac9bca5ec0c3222f6cea66652f 479 Gene3D G3DSA:1.20.1250.20 268 473 2.0E-17 T 12-10-2018 ABD1_16340 8d311fac9bca5ec0c3222f6cea66652f 479 Gene3D G3DSA:1.20.1720.10 20 255 5.2E-37 T 12-10-2018 ABD1_16340 8d311fac9bca5ec0c3222f6cea66652f 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 431 1.7E-71 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABD1_16340 8d311fac9bca5ec0c3222f6cea66652f 479 Pfam PF07690 Major Facilitator Superfamily 25 418 1.4E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_16340 8d311fac9bca5ec0c3222f6cea66652f 479 SUPERFAMILY SSF103473 17 473 2.75E-59 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_00480 439d9fa7e7284410bd50dfc74083ab6e 240 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 142 1.1E-21 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ABD1_00480 439d9fa7e7284410bd50dfc74083ab6e 240 SUPERFAMILY SSF54534 43 240 5.81E-57 T 12-10-2018 ABD1_00480 439d9fa7e7284410bd50dfc74083ab6e 240 Gene3D G3DSA:3.10.50.40 99 240 4.2E-54 T 12-10-2018 ABD1_00480 439d9fa7e7284410bd50dfc74083ab6e 240 Gene3D G3DSA:1.10.287.460 40 98 6.4E-10 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 ABD1_00480 439d9fa7e7284410bd50dfc74083ab6e 240 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 150 237 1.1E-30 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 10 416 1.1E-57 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 205 218 7.2E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 156 170 7.2E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 9 25 7.2E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 Pfam PF00145 C-5 cytosine-specific DNA methylase 109 417 3.2E-55 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 Pfam PF00145 C-5 cytosine-specific DNA methylase 8 54 1.6E-6 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 SUPERFAMILY SSF53335 8 417 1.9E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 Gene3D G3DSA:3.90.120.10 283 409 5.6E-22 T 12-10-2018 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 Gene3D G3DSA:3.40.50.150 2 244 6.8E-56 T 12-10-2018 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 398 416 - T 12-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 ABD1_12540 dfbc1a7f32132c82fbe00c67ac578ce0 422 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 115 127 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 ABD1_10500 de0e5bca275ba3966fd956cded511324 772 Gene3D G3DSA:2.40.170.20 282 771 2.5E-43 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_10500 de0e5bca275ba3966fd956cded511324 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 135 1.7E-10 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_10500 de0e5bca275ba3966fd956cded511324 772 SUPERFAMILY SSF56935 51 770 1.56E-59 T 12-10-2018 ABD1_10500 de0e5bca275ba3966fd956cded511324 772 Pfam PF00593 TonB dependent receptor 306 770 5.3E-33 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_10500 de0e5bca275ba3966fd956cded511324 772 Gene3D G3DSA:2.170.130.10 36 143 3.1E-14 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 258 293 7.5E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 114 149 1.0E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 42 77 9.8E-12 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 78 113 1.4E-13 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 186 221 4.6E-11 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 222 257 2.2E-11 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SMART SM00671 150 185 2.3E-12 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Gene3D G3DSA:1.25.40.10 21 148 4.2E-46 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Gene3D G3DSA:1.25.40.10 149 301 1.3E-54 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SUPERFAMILY SSF81901 132 300 1.74E-52 T 12-10-2018 ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 186 221 5.7E-8 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 150 185 9.0E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 224 255 1.7E-8 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 78 112 2.5E-11 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 115 149 1.5E-8 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 43 77 1.6E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 Pfam PF08238 Sel1 repeat 259 293 3.8E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_12970 714b8c1c2c51975c41e2a7b841201aff 302 SUPERFAMILY SSF81901 31 160 2.75E-39 T 12-10-2018 ABD1_31610 694c19c9fbfef6cf9295804b7e37b35e 414 Gene3D G3DSA:1.20.1250.20 27 411 3.4E-48 T 12-10-2018 ABD1_31610 694c19c9fbfef6cf9295804b7e37b35e 414 SUPERFAMILY SSF103473 23 408 1.96E-55 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_31610 694c19c9fbfef6cf9295804b7e37b35e 414 Pfam PF07690 Major Facilitator Superfamily 37 259 1.2E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 SMART SM00244 21 179 7.8E-55 T 12-10-2018 IPR001107 Band 7 domain ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 155 173 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 131 154 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 28 50 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 76 97 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 111 128 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 PRINTS PR00721 Stomatin signature 174 195 5.7E-25 T 12-10-2018 IPR001972 Stomatin family GO:0016020 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 SUPERFAMILY SSF117892 52 186 9.02E-38 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 Gene3D G3DSA:3.30.479.30 49 181 7.0E-38 T 12-10-2018 ABD1_27050 3216e5aefb243b936635b24f1325a46f 284 Pfam PF01145 SPFH domain / Band 7 family 25 195 3.7E-35 T 12-10-2018 IPR001107 Band 7 domain ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 SUPERFAMILY SSF46785 3 114 8.39E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:3.40.190.10 85 200 1.1E-6 T 12-10-2018 ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:1.10.10.10 1 84 6.6E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:3.40.190.10 201 265 2.9E-5 T 12-10-2018 ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.5E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 Pfam PF03466 LysR substrate binding domain 91 275 1.5E-20 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_17220 59c78874ce6da225cc306c532b62b8b9 298 SUPERFAMILY SSF53850 91 277 1.85E-19 T 12-10-2018 ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:2.40.50.100 87 285 3.5E-32 T 12-10-2018 ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 315 5.4E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 SUPERFAMILY SSF111369 78 140 3.14E-6 T 12-10-2018 ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 SUPERFAMILY SSF111369 209 310 9.94E-9 T 12-10-2018 ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:1.10.287.470 121 250 3.5E-32 T 12-10-2018 ABD1_25720 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:2.40.30.170 78 365 3.5E-32 T 12-10-2018 ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 Gene3D G3DSA:3.30.160.390 11 113 4.9E-5 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 Pfam PF00589 Phage integrase family 257 385 1.4E-14 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 Gene3D G3DSA:1.10.150.130 114 216 2.8E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 Gene3D G3DSA:1.10.443.10 242 420 1.3E-24 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 Pfam PF13356 Arm DNA-binding domain 12 97 7.0E-12 T 12-10-2018 IPR025166 Integrase, DNA-binding domain ABD1_10530 fbfd8da96af375a72ca522489c843aee 455 SUPERFAMILY SSF56349 115 409 2.12E-36 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 PRINTS PR00116 Arginase signature 266 280 1.4E-8 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 PRINTS PR00116 Arginase signature 112 127 1.4E-8 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 PRINTS PR00116 Arginase signature 231 260 1.4E-8 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 TIGRFAM TIGR01227 hutG: formimidoylglutamase 18 303 2.1E-89 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 Hamap MF_00737 Formimidoylglutamase [hutG]. 2 305 39.677 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 Pfam PF00491 Arginase family 32 303 8.5E-63 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 ProSitePatterns PS01053 Arginase family signature. 234 255 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 PIRSF PIRSF036979 13 306 1.9E-31 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 SUPERFAMILY SSF52768 11 304 2.52E-80 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily ABD1_33040 2fd9921168be9979f7c472309a63ac89 306 Gene3D G3DSA:3.40.800.10 1 306 8.2E-112 T 12-10-2018 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 SUPERFAMILY SSF53850 88 286 1.3E-42 T 12-10-2018 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 Gene3D G3DSA:1.10.10.10 1 91 2.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 Gene3D G3DSA:3.40.190.290 92 286 1.5E-42 T 12-10-2018 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 Pfam PF03466 LysR substrate binding domain 88 286 3.0E-43 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03850 f9282fa5020e42de674fd60da1ca63d8 286 SUPERFAMILY SSF46785 1 110 3.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 Gene3D G3DSA:1.10.10.10 124 219 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 Gene3D G3DSA:3.40.50.2300 1 123 2.7E-37 T 12-10-2018 ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 Pfam PF00072 Response regulator receiver domain 3 113 2.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 SMART SM00448 1 112 1.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 SUPERFAMILY SSF52172 1 179 7.76E-40 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 SMART SM00862 145 216 1.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_22870 2fcc8b627918a4a43405cef1b3e3650f 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.3E-49 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:1.10.540.10 1 118 5.1E-41 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 4.6E-33 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 3.1E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 PIRSF PIRSF016578 127 376 8.7E-13 T 12-10-2018 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 PIRSF PIRSF016578 3 111 3.7E-6 T 12-10-2018 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 SUPERFAMILY SSF47203 225 375 7.25E-57 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 SUPERFAMILY SSF56645 2 238 1.44E-78 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:2.40.110.10 119 231 1.4E-43 T 12-10-2018 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_21470 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:1.20.140.10 232 378 5.3E-55 T 12-10-2018 ABD1_33750 43b0d407a70aa54605a95b091f7d5481 301 SMART SM00235 159 301 0.0093 T 12-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 ABD1_33750 43b0d407a70aa54605a95b091f7d5481 301 SUPERFAMILY SSF55486 221 296 2.65E-13 T 12-10-2018 ABD1_33750 43b0d407a70aa54605a95b091f7d5481 301 Pfam PF00413 Matrixin 35 294 1.3E-11 T 12-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33750 43b0d407a70aa54605a95b091f7d5481 301 PRINTS PR00138 Matrixin signature 253 278 8.2E-7 T 12-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33750 43b0d407a70aa54605a95b091f7d5481 301 PRINTS PR00138 Matrixin signature 61 76 8.2E-7 T 12-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_22670 05e6344f95d9747a35407212a4fac408 324 Pfam PF00753 Metallo-beta-lactamase superfamily 29 99 1.9E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_22670 05e6344f95d9747a35407212a4fac408 324 Gene3D G3DSA:3.60.15.10 2 308 5.5E-77 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_22670 05e6344f95d9747a35407212a4fac408 324 SUPERFAMILY SSF56281 4 308 1.29E-60 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_22670 05e6344f95d9747a35407212a4fac408 324 Hamap MF_01818 Ribonuclease BN [rbn]. 2 308 28.991 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.5E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 SUPERFAMILY SSF52172 7 185 3.13E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 SUPERFAMILY SSF52540 140 383 3.55E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.8E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.8E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 SMART SM00382 160 303 1.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Gene3D G3DSA:1.10.8.60 311 377 2.0E-22 T 12-10-2018 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 SMART SM00448 6 117 6.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Gene3D G3DSA:3.40.50.2300 1 129 5.1E-29 T 12-10-2018 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 SUPERFAMILY SSF46689 354 466 1.36E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Gene3D G3DSA:3.40.50.300 130 310 1.8E-59 T 12-10-2018 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Pfam PF00158 Sigma-54 interaction domain 140 306 1.9E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 Gene3D G3DSA:1.10.10.60 401 468 2.3E-15 T 12-10-2018 ABD1_02180 6c33cba54245dfe141f7bc9651fb8ee5 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 Gene3D G3DSA:2.40.180.10 21 506 8.6E-211 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 ProSitePatterns PS00438 Catalase proximal active site signature. 60 76 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 SMART SM01060 24 406 3.9E-240 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PIRSF PIRSF038928 14 496 5.8E-189 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 SUPERFAMILY SSF56634 20 497 1.15E-194 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 Pfam PF06628 Catalase-related immune-responsive 429 490 2.2E-17 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 Pfam PF00199 Catalase 24 403 7.4E-171 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 37 60 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 99 117 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 336 362 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 139 157 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 120 137 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_32840 7db40c12211b047d2c9fb4857b055068 507 PRINTS PR00067 Catalase signature 304 331 9.1E-67 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 SUPERFAMILY SSF48498 77 191 1.48E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 166 2.6E-8 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 Gene3D G3DSA:1.10.10.60 1 63 4.0E-24 T 12-10-2018 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 SUPERFAMILY SSF46689 4 61 3.13E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 8.2E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00880 4a96da72b5bfd8f72419e70ccf38e245 194 Gene3D G3DSA:1.10.357.10 68 194 5.8E-28 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.6E-82 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-13 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.7E-13 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-13 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Gene3D G3DSA:3.40.50.880 1 193 5.6E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 SUPERFAMILY SSF52317 1 192 3.44E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.9E-53 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-34 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-34 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-34 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-34 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-34 T 12-10-2018 ABD1_23520 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-34 T 12-10-2018 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Gene3D G3DSA:3.40.50.620 35 641 1.9E-233 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Gene3D G3DSA:3.90.740.10 204 420 1.9E-233 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Gene3D G3DSA:1.10.730.20 652 936 9.8E-91 T 12-10-2018 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 SUPERFAMILY SSF52374 11 660 4.86E-139 T 12-10-2018 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 852 5.5E-279 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 SUPERFAMILY SSF47323 664 932 3.36E-75 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Pfam PF06827 Zinc finger found in FPG and IleRS 905 932 7.7E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 4.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 573 582 4.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 4.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 4.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 4.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 936 21.058 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 SUPERFAMILY SSF50677 213 415 8.27E-52 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Pfam PF08264 Anticodon-binding domain of tRNA 697 852 1.0E-27 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABD1_00190 eb7454a52d37aabeb51eefe367cbfc6a 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 651 1.8E-204 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 SUPERFAMILY SSF48498 90 198 1.38E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 3.5E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 SUPERFAMILY SSF46689 17 95 4.09E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_29000 cc3603f4dc4daa8f878d3059184b6594 199 Gene3D G3DSA:1.10.357.10 15 199 2.4E-53 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Gene3D G3DSA:3.80.10.10 186 330 1.8E-26 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Gene3D G3DSA:3.40.50.10140 907 1033 6.0E-13 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 84 106 10.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 216 237 83.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 128 149 310.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 260 282 31.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 62 83 140.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 238 259 47.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 150 172 120.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00369 194 215 190.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 359 440 2.6E-8 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SUPERFAMILY SSF52058 20 341 3.69E-59 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Pfam PF13676 TIR domain 910 1007 2.1E-11 T 12-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SUPERFAMILY SSF52540 357 445 5.49E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Gene3D G3DSA:3.80.10.10 3 185 3.9E-38 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 Gene3D G3DSA:3.40.50.300 357 544 8.9E-13 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SUPERFAMILY SSF52200 909 1022 2.75E-9 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 260 281 0.48 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 216 237 7.7 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 84 105 11.0 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 62 83 100.0 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 150 171 0.0011 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 40 61 2.1 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 194 215 21.0 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 106 127 0.0012 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 172 193 3.9 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 128 149 23.0 T 12-10-2018 ABD1_26910 fbe3efb2b71d727261cea75a23b1177a 1095 SMART SM00365 238 259 47.0 T 12-10-2018 ABD1_12190 d320c4574ec4ddad186c9c72984274cf 452 SUPERFAMILY SSF103473 9 429 2.88E-84 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_12190 d320c4574ec4ddad186c9c72984274cf 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_12190 d320c4574ec4ddad186c9c72984274cf 452 Gene3D G3DSA:1.20.1250.20 19 430 1.9E-76 T 12-10-2018 ABD1_12190 d320c4574ec4ddad186c9c72984274cf 452 Pfam PF07690 Major Facilitator Superfamily 29 337 5.7E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_12190 d320c4574ec4ddad186c9c72984274cf 452 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 402 5.6E-131 T 12-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 ABD1_05670 8d257a3fcf1b7fa5c969b13380532027 358 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 309 4.8E-25 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_05670 8d257a3fcf1b7fa5c969b13380532027 358 SUPERFAMILY SSF52540 1 347 2.15E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05670 8d257a3fcf1b7fa5c969b13380532027 358 Gene3D G3DSA:3.40.50.300 1 343 9.8E-29 T 12-10-2018 ABD1_05670 8d257a3fcf1b7fa5c969b13380532027 358 PIRSF PIRSF029347 1 86 4.3E-12 T 12-10-2018 IPR014555 RecF-like ABD1_05670 8d257a3fcf1b7fa5c969b13380532027 358 PIRSF PIRSF029347 122 344 1.6E-25 T 12-10-2018 IPR014555 RecF-like ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 6 32 2.6E-5 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 SUPERFAMILY SSF56645 42 276 4.06E-41 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 464 4.9E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 482 602 7.3E-24 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Gene3D G3DSA:1.10.540.10 44 159 4.9E-6 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Gene3D G3DSA:1.20.140.10 301 468 9.3E-42 T 12-10-2018 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Gene3D G3DSA:2.40.110.10 161 300 2.2E-23 T 12-10-2018 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 274 3.4E-15 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 55 157 2.7E-4 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_18430 7d56fc3ef73fb8a2a6ed6babdee74855 607 SUPERFAMILY SSF47203 301 469 6.12E-39 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_27030 d34bdbbe50f26527a694d2e5eeb50be1 305 SUPERFAMILY SSF52151 35 287 1.07E-57 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_27030 d34bdbbe50f26527a694d2e5eeb50be1 305 Gene3D G3DSA:3.40.1090.20 159 211 3.3E-5 T 12-10-2018 ABD1_27030 d34bdbbe50f26527a694d2e5eeb50be1 305 Pfam PF01734 Patatin-like phospholipase 41 198 2.0E-24 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABD1_27030 d34bdbbe50f26527a694d2e5eeb50be1 305 Gene3D G3DSA:3.40.1090.10 24 137 1.1E-24 T 12-10-2018 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 Gene3D G3DSA:3.40.50.720 1 244 6.4E-83 T 12-10-2018 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.0E-5 T 12-10-2018 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.0E-95 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.1E-66 T 12-10-2018 ABD1_07740 24bcf5f51ed54c148600a5f39c17203e 244 SUPERFAMILY SSF51735 5 243 1.29E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_13910 be8e70fff603c52718581b6639914bd5 203 Pfam PF00717 Peptidase S24-like 116 184 2.2E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_13910 be8e70fff603c52718581b6639914bd5 203 SUPERFAMILY SSF51306 72 198 5.06E-30 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_13910 be8e70fff603c52718581b6639914bd5 203 Gene3D G3DSA:2.10.109.10 84 202 5.2E-39 T 12-10-2018 ABD1_21950 6d751f99b0bd9cf74b402c940494d3aa 150 Pfam PF13673 Acetyltransferase (GNAT) domain 48 139 6.1E-10 T 12-10-2018 IPR000182 GNAT domain ABD1_21950 6d751f99b0bd9cf74b402c940494d3aa 150 Gene3D G3DSA:3.40.630.30 6 143 4.5E-16 T 12-10-2018 ABD1_21950 6d751f99b0bd9cf74b402c940494d3aa 150 SUPERFAMILY SSF55729 3 136 2.57E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 SUPERFAMILY SSF53850 87 289 1.18E-40 T 12-10-2018 ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 SUPERFAMILY SSF46785 4 84 2.36E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 Pfam PF03466 LysR substrate binding domain 87 289 6.6E-38 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 Gene3D G3DSA:1.10.10.10 3 88 2.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_33710 f4cdbad0abf8c7624eb1dc73f7dbbad7 297 Gene3D G3DSA:3.40.190.290 89 289 7.3E-51 T 12-10-2018 ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 Pfam PF02565 Recombination protein O C terminal 77 227 6.6E-21 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 SUPERFAMILY SSF50249 1 69 5.14E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 Gene3D G3DSA:1.20.1440.120 74 237 7.7E-43 T 12-10-2018 ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 Gene3D G3DSA:2.40.50.140 4 69 3.5E-10 T 12-10-2018 ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 Pfam PF11967 Recombination protein O N terminal 3 41 1.2E-8 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal ABD1_25030 9519ee6cb2dc407bf9fd15313443b567 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 228 4.1E-14 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Gene3D G3DSA:1.10.10.160 109 190 2.4E-70 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Gene3D G3DSA:3.40.50.300 10 272 2.4E-70 T 12-10-2018 ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Pfam PF13361 UvrD-like helicase C-terminal domain 278 597 1.2E-39 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 SUPERFAMILY SSF52540 6 628 6.32E-123 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 270 2.4E-54 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Gene3D G3DSA:3.40.50.300 282 621 2.4E-66 T 12-10-2018 ABD1_04120 e9aad27d2c77addf168de362da4235f7 659 Gene3D G3DSA:1.10.486.10 382 522 2.4E-66 T 12-10-2018 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 Pfam PF01180 Dihydroorotate dehydrogenase 44 331 4.5E-86 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 SUPERFAMILY SSF51395 1 332 5.5E-103 T 12-10-2018 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 PIRSF PIRSF000164 13 334 4.0E-93 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 Gene3D G3DSA:3.20.20.70 2 332 3.6E-129 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 332 2.8E-126 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 50.631 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ABD1_22490 5dd3669e2c9c1de06061e56b18289c16 334 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 Gene3D G3DSA:3.30.1300.10 178 282 1.4E-28 T 12-10-2018 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 40.718 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 SUPERFAMILY SSF52374 1 278 4.56E-106 T 12-10-2018 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 1.1E-98 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 Gene3D G3DSA:3.40.50.620 1 177 6.7E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 3.1E-104 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABD1_05920 4c259be8d971d06c09d33a76e5848c22 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 1.1E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 168 2.1E-46 T 12-10-2018 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 Gene3D G3DSA:1.10.10.1590 16 85 2.1E-15 T 12-10-2018 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 PIRSF PIRSF000216 5 169 3.9E-49 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 SUPERFAMILY SSF52833 18 168 1.79E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 168 2.1E-46 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07070 95825814cbbe4d434c2fdedf6871d875 169 Gene3D G3DSA:3.40.30.10 86 168 3.1E-23 T 12-10-2018 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 PIRSF PIRSF000429 1 390 2.4E-111 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 Gene3D G3DSA:3.40.47.10 5 274 1.1E-139 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 Gene3D G3DSA:3.40.47.10 126 388 1.1E-139 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.7E-129 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 Pfam PF00108 Thiolase, N-terminal domain 4 261 2.0E-88 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 SUPERFAMILY SSF53901 270 389 3.12E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.1E-43 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_17240 2aa5472f3dbbfdf5b1d69518ad9ab06e 390 SUPERFAMILY SSF53901 4 268 1.55E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 ProSitePatterns PS01081 TetR-type HTH domain signature. 8 38 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 39 6.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 Gene3D G3DSA:1.10.357.10 56 177 4.5E-29 T 12-10-2018 ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 Gene3D G3DSA:1.10.10.60 1 50 1.2E-17 T 12-10-2018 ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 SUPERFAMILY SSF48498 63 176 6.5E-24 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_01630 13b20cd3bc2cc0924c77771220a59820 179 SUPERFAMILY SSF46689 3 49 2.62E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 PIRSF PIRSF002158 10 274 4.1E-101 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:2.30.30.30 115 195 9.8E-31 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 SUPERFAMILY SSF50249 3 124 3.32E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.3E-34 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:2.40.50.140 1 114 7.3E-49 T 12-10-2018 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:4.10.950.10 196 273 2.0E-33 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 SMART SM01382 124 251 3.1E-84 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 7.3E-125 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.552 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 SMART SM01383 42 118 3.9E-46 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.4E-53 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABD1_29630 57f2d18e33b7ed34567dc80eda5727d0 274 SUPERFAMILY SSF50104 126 269 1.87E-56 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABD1_17630 5fe3f6d52c16ee05d6f279d8ae7dd61e 387 Gene3D G3DSA:2.40.180.20 94 357 1.1E-25 T 12-10-2018 ABD1_17630 5fe3f6d52c16ee05d6f279d8ae7dd61e 387 Pfam PF00199 Catalase 88 194 4.3E-8 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_17630 5fe3f6d52c16ee05d6f279d8ae7dd61e 387 Gene3D G3DSA:1.20.1280.120 81 368 1.1E-25 T 12-10-2018 ABD1_17630 5fe3f6d52c16ee05d6f279d8ae7dd61e 387 SUPERFAMILY SSF56634 80 378 1.31E-54 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 Gene3D G3DSA:1.10.10.10 126 223 1.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 SUPERFAMILY SSF52172 1 176 3.42E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 SMART SM00448 2 112 3.9E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.1E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 SMART SM00862 150 221 2.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_26980 3ec960100d64f6a4b2687f1e68fa457a 224 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-35 T 12-10-2018 ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 246 1.7E-64 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 SUPERFAMILY SSF55315 3 78 5.89E-17 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 SMART SM00967 6 82 4.1E-16 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 Gene3D G3DSA:3.30.1330.30 1 78 7.0E-24 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 247 38.089 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 SUPERFAMILY SSF75217 70 246 5.43E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 Gene3D G3DSA:3.40.1280.10 81 247 4.3E-52 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 Pfam PF00588 SpoU rRNA Methylase family 98 240 2.1E-37 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABD1_03000 357e82aea53b5c6c05abce334179bd2a 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.5E-17 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 Gene3D G3DSA:3.40.309.10 259 448 5.1E-173 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 SUPERFAMILY SSF53720 20 479 2.88E-162 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 Pfam PF00171 Aldehyde dehydrogenase family 23 475 2.8E-160 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 Gene3D G3DSA:3.40.605.10 22 471 5.1E-173 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_31750 c0016743f1a107709ba54935a8c331d1 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 474 5.8E-210 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 26 92 1.9E-17 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 SUPERFAMILY SSF51161 34 320 1.11E-71 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 328 2.7E-104 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Gene3D G3DSA:2.160.10.10 103 312 1.3E-70 T 12-10-2018 ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 262 288 0.11 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 144 1.8E-7 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 2.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 183 9.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 329 33.203 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ABD1_19930 9f621b05cd903a64c3abb6891fb11a30 356 Gene3D G3DSA:3.40.1390.10 1 102 9.6E-39 T 12-10-2018 ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 Gene3D G3DSA:3.40.640.10 44 268 2.4E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 SUPERFAMILY SSF53383 27 357 1.31E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 Gene3D G3DSA:3.90.1150.10 26 350 2.4E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 358 4.2E-97 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 Pfam PF00155 Aminotransferase class I and II 31 355 3.6E-60 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_06360 6bf1fd8aeec96af8892b23225bb3e8f7 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 361 59.043 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 Gene3D G3DSA:3.40.630.10 3 237 2.6E-59 T 12-10-2018 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 SUPERFAMILY SSF53187 14 483 1.03E-61 T 12-10-2018 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PIRSF PIRSF016599 3 486 4.5E-185 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 Pfam PF01546 Peptidase family M20/M25/M40 74 482 1.7E-19 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 10 485 3.5E-158 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 82 101 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 103 121 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 431 447 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 161 179 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 453 475 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 253 272 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 366 384 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 137 154 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 PRINTS PR00934 X-His dipeptidase (M25) signature 208 225 6.9E-68 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 Pfam PF07687 Peptidase dimerisation domain 212 293 1.6E-4 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain ABD1_22720 c0e6cbd0114dfff9f10456655a08d554 486 Gene3D G3DSA:3.40.630.10 374 486 4.9E-21 T 12-10-2018 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 Pfam PF00579 tRNA synthetases class I (W and Y) 7 288 4.5E-55 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 SUPERFAMILY SSF52374 9 334 4.91E-79 T 12-10-2018 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 334 1.7E-71 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 Gene3D G3DSA:3.40.50.620 10 329 1.9E-104 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 Gene3D G3DSA:1.10.240.10 188 302 1.9E-104 T 12-10-2018 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 1.3E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 1.3E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.3E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 1.3E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABD1_26480 d3553a6c672cef4d52bd9261eba80d24 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 443 37.62 T 12-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 Pfam PF00375 Sodium:dicarboxylate symporter family 10 416 2.9E-110 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 Gene3D G3DSA:1.10.3860.10 1 434 1.7E-122 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 SUPERFAMILY SSF118215 10 416 1.03E-119 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 51 66 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 2.0E-27 T 12-10-2018 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 2.0E-27 T 12-10-2018 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 2.0E-27 T 12-10-2018 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 2.0E-27 T 12-10-2018 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 2.0E-27 T 12-10-2018 ABD1_22780 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 2.0E-27 T 12-10-2018 ABD1_18070 e14325a72cbb6da3093955190172dc70 303 SUPERFAMILY SSF53474 49 298 1.74E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18070 e14325a72cbb6da3093955190172dc70 303 Pfam PF07859 alpha/beta hydrolase fold 79 285 4.2E-64 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_18070 e14325a72cbb6da3093955190172dc70 303 Gene3D G3DSA:3.40.50.1820 3 303 4.1E-82 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_29820 c750da6ad929320f006ad4f6528482da 133 SUPERFAMILY SSF55811 3 125 1.15E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_29820 c750da6ad929320f006ad4f6528482da 133 Pfam PF00293 NUDIX domain 6 124 6.1E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_29820 c750da6ad929320f006ad4f6528482da 133 Gene3D G3DSA:3.90.79.10 1 130 7.1E-24 T 12-10-2018 ABD1_29820 c750da6ad929320f006ad4f6528482da 133 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_12810 fc3308a5e4c66626be64fdf1f57cf34f 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 5.0E-24 T 12-10-2018 IPR019223 Domain of unknown function DUF2147 ABD1_12810 fc3308a5e4c66626be64fdf1f57cf34f 145 Gene3D G3DSA:2.40.128.520 25 145 1.2E-15 T 12-10-2018 ABD1_16130 e08ddcfead8664273f0177d5795b59d4 489 SMART SM00044 191 388 3.6E-15 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ABD1_16130 e08ddcfead8664273f0177d5795b59d4 489 Gene3D G3DSA:3.30.70.1230 218 412 4.0E-64 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_16130 e08ddcfead8664273f0177d5795b59d4 489 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 407 5.3E-34 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ABD1_16130 e08ddcfead8664273f0177d5795b59d4 489 SUPERFAMILY SSF55073 223 407 3.61E-54 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 PIRSF PIRSF000854 2 792 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 479 780 8.7E-64 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF51621 460 790 2.25E-101 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.30.470.20 193 356 3.2E-58 T 12-10-2018 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.50.30.10 357 476 6.3E-42 T 12-10-2018 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF56059 4 383 2.56E-105 T 12-10-2018 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.20.20.60 477 789 7.6E-104 T 12-10-2018 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF52009 347 466 1.57E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.30.1490.20 2 192 1.8E-71 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 786 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 7.5E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABD1_21630 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 7.9E-118 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ABD1_05470 70418e092196484e413922a96be2df38 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 193 1.6E-44 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABD1_05470 70418e092196484e413922a96be2df38 209 SUPERFAMILY SSF53639 10 191 1.02E-53 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABD1_05470 70418e092196484e413922a96be2df38 209 SMART SM01007 16 198 5.0E-50 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABD1_05470 70418e092196484e413922a96be2df38 209 Gene3D G3DSA:3.40.225.10 3 199 1.4E-64 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.346 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.5E-45 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 Pfam PF01196 Ribosomal protein L17 20 116 2.4E-33 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 Gene3D G3DSA:3.90.1030.10 1 117 3.8E-46 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29400 cbe0612e51fdae8587e6c9d89631a1a9 125 SUPERFAMILY SSF64263 1 119 2.49E-49 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 284 361 9.0E-14 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Gene3D G3DSA:3.20.20.60 623 952 8.9E-116 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 640 923 3.5E-105 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR00107 Phosphocarrier protein signature 294 310 1.5E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR00107 Phosphocarrier protein signature 335 352 1.5E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR00107 Phosphocarrier protein signature 320 335 1.5E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF55594 283 370 3.14E-17 T 12-10-2018 IPR035895 HPr-like superfamily ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF52009 516 635 2.62E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Pfam PF05524 PEP-utilising enzyme, N-terminal 401 517 1.1E-21 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 402 947 4.9E-152 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 830 845 8.0E-19 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 682 701 8.0E-19 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 883 895 8.0E-19 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 847 862 8.0E-19 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 573 584 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF51621 642 932 2.88E-101 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Gene3D G3DSA:3.40.930.10 1 141 5.0E-36 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Pfam PF00391 PEP-utilising enzyme, mobile domain 542 614 1.1E-18 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Gene3D G3DSA:3.50.30.10 402 622 3.5E-57 T 12-10-2018 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF55804 147 274 2.44E-10 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF55804 4 139 3.84E-34 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Gene3D G3DSA:3.30.1340.10 283 370 8.5E-19 T 12-10-2018 IPR035895 HPr-like superfamily ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 SUPERFAMILY SSF47831 419 534 2.22E-26 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 9.1E-27 T 12-10-2018 IPR002178 PTS EIIA type-2 domain ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Gene3D G3DSA:1.10.274.10 419 536 3.5E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 830 848 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 294 301 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ABD1_19670 37d90141fccb41d6a013d43572c6d51a 952 Pfam PF00381 PTS HPr component phosphorylation site 284 360 1.5E-16 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 Pfam PF07731 Multicopper oxidase 503 616 2.2E-27 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 Gene3D G3DSA:2.60.40.420 19 144 3.0E-36 T 12-10-2018 IPR008972 Cupredoxin ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 ProSitePatterns PS00079 Multicopper oxidases signature 1. 593 613 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 Pfam PF00394 Multicopper oxidase 159 332 1.5E-28 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 26 615 7.3E-188 T 12-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 SUPERFAMILY SSF49503 468 615 7.46E-36 T 12-10-2018 IPR008972 Cupredoxin ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 ProSitePatterns PS00080 Multicopper oxidases signature 2. 598 609 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 Gene3D G3DSA:2.60.40.420 156 358 7.3E-40 T 12-10-2018 IPR008972 Cupredoxin ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 SUPERFAMILY SSF49503 156 362 2.98E-45 T 12-10-2018 IPR008972 Cupredoxin ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 SUPERFAMILY SSF49503 16 173 4.95E-34 T 12-10-2018 IPR008972 Cupredoxin ABD1_06560 0242f471bf95c8b99a89ce06844cc942 644 Pfam PF07732 Multicopper oxidase 32 145 2.1E-34 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 ABD1_25880 e05894b998015b6822938315e6bd4830 462 SMART SM00382 91 246 6.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_25880 e05894b998015b6822938315e6bd4830 462 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.661 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABD1_25880 e05894b998015b6822938315e6bd4830 462 SUPERFAMILY SSF54211 256 454 8.72E-39 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_25880 e05894b998015b6822938315e6bd4830 462 Gene3D G3DSA:3.30.230.10 319 458 3.5E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_25880 e05894b998015b6822938315e6bd4830 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 430 7.8E-7 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 6.9E-191 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABD1_25880 e05894b998015b6822938315e6bd4830 462 Pfam PF06745 KaiC 75 150 4.3E-11 T 12-10-2018 IPR014774 KaiC-like domain ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 125 142 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 249 275 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 214 242 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 322 345 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 10 34 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 175 199 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 83 111 5.2E-91 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 Gene3D G3DSA:3.40.50.300 60 275 2.1E-40 T 12-10-2018 ABD1_25880 e05894b998015b6822938315e6bd4830 462 SUPERFAMILY SSF52540 70 288 3.73E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11940 6d3fd054ba7b6e2119170a7f0520c15a 113 SUPERFAMILY SSF82784 1 104 1.01E-28 T 12-10-2018 IPR036102 OsmC/Ohr superfamily ABD1_11940 6d3fd054ba7b6e2119170a7f0520c15a 113 Gene3D G3DSA:2.20.25.10 1 33 2.3E-8 T 12-10-2018 ABD1_11940 6d3fd054ba7b6e2119170a7f0520c15a 113 Gene3D G3DSA:3.30.300.20 39 113 7.8E-17 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_11940 6d3fd054ba7b6e2119170a7f0520c15a 113 Pfam PF02566 OsmC-like protein 33 102 9.8E-13 T 12-10-2018 IPR003718 OsmC/Ohr family ABD1_12710 205e5d19b232b1c7b5881086ea99380f 223 SUPERFAMILY SSF55166 86 216 1.02E-15 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABD1_12710 205e5d19b232b1c7b5881086ea99380f 223 Gene3D G3DSA:3.30.1380.10 77 214 1.1E-5 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABD1_12710 205e5d19b232b1c7b5881086ea99380f 223 Pfam PF08291 Peptidase M15 123 160 1.1E-5 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 ABD1_32580 bc14856b0d016e3482f0f5b1601d1fa0 162 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 157 6.9E-30 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ABD1_32580 bc14856b0d016e3482f0f5b1601d1fa0 162 Gene3D G3DSA:3.40.50.1820 1 161 6.8E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32580 bc14856b0d016e3482f0f5b1601d1fa0 162 SUPERFAMILY SSF53474 11 160 7.24E-13 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 3.7E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 SMART SM00345 18 77 1.7E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 SUPERFAMILY SSF46785 7 81 3.02E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 Gene3D G3DSA:1.10.10.10 13 80 3.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 SMART SM00866 98 240 2.2E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 Pfam PF07702 UTRA domain 99 240 2.1E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 SUPERFAMILY SSF64288 65 246 8.79E-46 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.6E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.6E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_17090 e282008ba4005120c3f57f4adae8b19f 247 Gene3D G3DSA:3.40.1410.10 81 247 1.8E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Pfam PF00390 Malic enzyme, N-terminal domain 21 113 4.3E-20 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 2.4E-6 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 SMART SM00919 164 397 2.4E-127 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 SUPERFAMILY SSF53223 11 162 3.09E-52 T 12-10-2018 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Gene3D G3DSA:3.40.50.10950 442 748 5.1E-94 T 12-10-2018 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 2.3E-22 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 SMART SM01274 19 152 2.7E-80 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 SUPERFAMILY SSF51735 164 449 2.25E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Gene3D G3DSA:3.40.50.10380 1 161 6.4E-70 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 PIRSF PIRSF036684 1 756 0.0 T 12-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 SUPERFAMILY SSF53659 426 751 2.67E-89 T 12-10-2018 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Gene3D G3DSA:3.40.50.10750 569 724 5.1E-94 T 12-10-2018 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 4.0E-95 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABD1_23390 8b792dfaf4504d7b8ceb4e77a4f8e948 756 Gene3D G3DSA:3.40.50.720 162 441 6.2E-82 T 12-10-2018 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 SUPERFAMILY SSF56655 11 278 4.06E-57 T 12-10-2018 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 222 246 3.0E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 3.0E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 3.0E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 3.0E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 Pfam PF00459 Inositol monophosphatase family 18 259 1.4E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 Gene3D G3DSA:3.30.540.10 10 159 1.4E-32 T 12-10-2018 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 267 35.396 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 ABD1_16030 52b1b0b1642e7a8855b6df6f6dce6bb4 285 Gene3D G3DSA:3.40.190.80 163 270 5.2E-26 T 12-10-2018 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 Pfam PF00925 GTP cyclohydrolase II 210 365 4.0E-29 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 SUPERFAMILY SSF55821 2 202 1.53E-85 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.835 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.7E-83 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 Gene3D G3DSA:3.90.870.10 1 206 3.0E-87 T 12-10-2018 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.3E-74 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 PIRSF PIRSF001259 2 373 4.9E-115 T 12-10-2018 ABD1_32900 a227796ab471f0abb5c9026ec82f8fc2 373 SUPERFAMILY SSF142695 205 365 3.92E-35 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_19050 5a33ab0cb7be4812b304a2d83afecdce 209 Pfam PF00775 Dioxygenase 43 199 6.9E-20 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_19050 5a33ab0cb7be4812b304a2d83afecdce 209 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 12 209 1.6E-85 T 12-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ABD1_19050 5a33ab0cb7be4812b304a2d83afecdce 209 Gene3D G3DSA:2.60.130.10 1 209 7.5E-86 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_19050 5a33ab0cb7be4812b304a2d83afecdce 209 SUPERFAMILY SSF49482 9 209 9.94E-63 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_19050 5a33ab0cb7be4812b304a2d83afecdce 209 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 55 83 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 1.2E-20 T 12-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 SUPERFAMILY SSF49482 15 290 1.7E-83 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 Gene3D G3DSA:2.60.130.10 1 306 8.4E-121 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 2.6E-146 T 12-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 Pfam PF00775 Dioxygenase 101 287 2.2E-59 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_18690 52871ed4f70cbc0a7c010321b3b13b9f 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ABD1_31140 7be2de08add787d4541f08241318a43b 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABD1_31140 7be2de08add787d4541f08241318a43b 197 Gene3D G3DSA:3.30.230.40 1 91 7.0E-38 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABD1_31140 7be2de08add787d4541f08241318a43b 197 Gene3D G3DSA:3.30.230.40 92 197 9.4E-39 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABD1_31140 7be2de08add787d4541f08241318a43b 197 SUPERFAMILY SSF54211 4 88 1.77E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_31140 7be2de08add787d4541f08241318a43b 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.394 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABD1_31140 7be2de08add787d4541f08241318a43b 197 SUPERFAMILY SSF54211 89 181 2.28E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_31140 7be2de08add787d4541f08241318a43b 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.1E-63 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABD1_31140 7be2de08add787d4541f08241318a43b 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABD1_31650 a89c55a2bb62aa82d023e5dd806b4d4e 305 Pfam PF08220 DeoR-like helix-turn-helix domain 14 56 1.7E-4 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABD1_31650 a89c55a2bb62aa82d023e5dd806b4d4e 305 PIRSF PIRSF016838 5 62 0.024 T 12-10-2018 IPR028349 Protein PafC ABD1_31650 a89c55a2bb62aa82d023e5dd806b4d4e 305 PIRSF PIRSF016838 100 302 6.8E-12 T 12-10-2018 IPR028349 Protein PafC ABD1_31650 a89c55a2bb62aa82d023e5dd806b4d4e 305 Pfam PF13280 WYL domain 131 299 3.0E-31 T 12-10-2018 IPR026881 WYL domain ABD1_31650 a89c55a2bb62aa82d023e5dd806b4d4e 305 Gene3D G3DSA:1.10.10.10 2 69 3.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_04190 174f4aecd6a65137d5d00e493258875d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.8E-28 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_04190 174f4aecd6a65137d5d00e493258875d 78 Pfam PF00830 Ribosomal L28 family 3 61 1.0E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04190 174f4aecd6a65137d5d00e493258875d 78 SUPERFAMILY SSF143800 2 77 5.3E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04190 174f4aecd6a65137d5d00e493258875d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04190 174f4aecd6a65137d5d00e493258875d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 880 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52518 469 696 1.18E-95 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 PIRSF PIRSF000156 2 884 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52518 54 464 1.51E-138 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 134 292 2.1E-8 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.920 702 883 6.4E-67 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.970 468 701 4.7E-107 T 12-10-2018 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52922 697 879 1.83E-50 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_32230 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.970 53 467 7.8E-134 T 12-10-2018 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Pfam PF07244 Surface antigen variable number repeat 321 395 6.2E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Pfam PF01103 Surface antigen 605 903 6.4E-35 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Gene3D G3DSA:2.40.160.50 575 906 7.5E-97 T 12-10-2018 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Gene3D G3DSA:3.10.20.310 313 400 1.1E-18 T 12-10-2018 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Pfam PF17243 POTRA domain TamA domain 1 243 311 5.6E-11 T 12-10-2018 IPR035243 TamA, POTRA domain 1 ABD1_21310 16c583663bde995e1b38c7bd41a26566 906 Gene3D G3DSA:3.10.20.310 401 489 8.2E-6 T 12-10-2018 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 Gene3D G3DSA:1.10.10.10 7 88 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 2.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 SUPERFAMILY SSF53850 94 294 7.14E-37 T 12-10-2018 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 Gene3D G3DSA:3.40.190.290 94 289 3.7E-39 T 12-10-2018 ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 Pfam PF03466 LysR substrate binding domain 93 290 2.0E-33 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_24430 4bdf48141d4c64e0ab74b98613837d06 298 SUPERFAMILY SSF46785 5 115 1.36E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00580 66cc12420877b4cbd7265404accebbc1 344 Gene3D G3DSA:3.40.50.720 4 309 2.2E-135 T 12-10-2018 ABD1_00580 66cc12420877b4cbd7265404accebbc1 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 1.1E-105 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABD1_00580 66cc12420877b4cbd7265404accebbc1 344 SUPERFAMILY SSF51735 1 260 5.6E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00580 66cc12420877b4cbd7265404accebbc1 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 332 3.0E-24 T 12-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 ABD1_00580 66cc12420877b4cbd7265404accebbc1 344 Gene3D G3DSA:3.90.25.30 166 322 2.2E-135 T 12-10-2018 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 SUPERFAMILY SSF52374 3 385 2.56E-98 T 12-10-2018 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Gene3D G3DSA:2.40.50.140 578 687 3.9E-32 T 12-10-2018 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Pfam PF08264 Anticodon-binding domain of tRNA 425 501 9.0E-6 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Gene3D G3DSA:1.10.730.10 378 534 1.5E-34 T 12-10-2018 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Gene3D G3DSA:3.40.50.620 4 377 4.0E-148 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 7.9E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Pfam PF01588 Putative tRNA binding domain 592 685 6.3E-24 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 SUPERFAMILY SSF57770 138 172 3.01E-12 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Pfam PF09334 tRNA synthetases class I (M) 4 394 2.3E-150 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 533 2.6E-170 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 SUPERFAMILY SSF47323 388 546 1.85E-41 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 SUPERFAMILY SSF50249 585 686 5.63E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Gene3D G3DSA:2.20.28.20 138 172 4.0E-148 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 686 9.6E-42 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABD1_07330 961f097bbfe2a010a13d80c869e3713b 687 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 39.008 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 6.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 6.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 6.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 Gene3D G3DSA:3.40.50.720 1 290 3.6E-88 T 12-10-2018 ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 287 2.3E-62 T 12-10-2018 ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 235 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 252 272 7.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 SUPERFAMILY SSF51735 45 290 1.13E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_13880 c7225a686bbd6c87cb7de9b9a0130127 292 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 SUPERFAMILY SSF55681 91 325 9.67E-82 T 12-10-2018 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 Gene3D G3DSA:3.30.930.10 7 326 3.5E-121 T 12-10-2018 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 1.3E-19 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 2.7E-104 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 SUPERFAMILY SSF46589 11 98 1.05E-19 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 2.8E-109 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABD1_06070 cb2d57e2738e704c5f2bfec122560679 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.253 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 103 378 3.4E-175 T 12-10-2018 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 12 271 3.4E-175 T 12-10-2018 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 6 234 3.4E-175 T 12-10-2018 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 2.7E-67 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 111 233 6.67E-51 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 PIRSF PIRSF000497 1 387 1.7E-172 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 5.7E-42 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 6 110 9.03E-46 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 6.2E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.8E-188 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.72 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_15270 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 234 387 1.73E-69 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 SUPERFAMILY SSF51735 9 258 4.2E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 Pfam PF00106 short chain dehydrogenase 10 192 5.8E-54 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 Gene3D G3DSA:3.40.50.720 1 260 1.6E-68 T 12-10-2018 ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12210 225e533eb06e4d3810e3a89f177df205 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.2E-227 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.463 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:3.40.50.300 1 205 1.2E-68 T 12-10-2018 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50447 207 303 7.07E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-53 T 12-10-2018 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 12-10-2018 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50465 300 394 1.03E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 5.3E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF52540 6 221 5.16E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ABD1_02570 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 6.2E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.2E-227 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.463 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:3.40.50.300 1 205 1.2E-68 T 12-10-2018 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50447 207 303 7.07E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-53 T 12-10-2018 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 12-10-2018 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50465 300 394 1.03E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 5.3E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF52540 6 221 5.16E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ABD1_08150 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 6.2E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABD1_32200 ba5fa777c0a3ddcc0c9388304e10f3a0 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.7E-23 T 12-10-2018 IPR001727 Gdt1 family ABD1_32200 ba5fa777c0a3ddcc0c9388304e10f3a0 191 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 4.2E-19 T 12-10-2018 IPR001727 Gdt1 family ABD1_27290 1a4973d11d6451a0b790cde9c3c1dc52 104 Gene3D G3DSA:1.10.20.60 9 102 1.5E-21 T 12-10-2018 ABD1_27290 1a4973d11d6451a0b790cde9c3c1dc52 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 6.8E-17 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABD1_27290 1a4973d11d6451a0b790cde9c3c1dc52 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 7.8E-28 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABD1_27290 1a4973d11d6451a0b790cde9c3c1dc52 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.367 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABD1_27290 1a4973d11d6451a0b790cde9c3c1dc52 104 SUPERFAMILY SSF141000 12 102 3.4E-27 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Pfam PF08245 Mur ligase middle domain 108 295 5.8E-23 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 SUPERFAMILY SSF53623 97 312 7.98E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Gene3D G3DSA:3.90.190.20 318 454 5.2E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 SUPERFAMILY SSF53244 314 452 4.58E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 4.6E-209 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 SUPERFAMILY SSF51984 1 90 2.22E-21 T 12-10-2018 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.2E-16 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Gene3D G3DSA:3.40.50.720 1 90 6.1E-34 T 12-10-2018 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Gene3D G3DSA:3.40.1190.10 91 317 2.3E-58 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 5.6E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABD1_33810 6d90c209172aba06b142b0b63178fd00 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 58.162 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 ABD1_26620 4a66592669a75df779e26d24dd0545d0 174 Pfam PF03695 Uncharacterised protein family (UPF0149) 7 170 1.3E-20 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 ABD1_26620 4a66592669a75df779e26d24dd0545d0 174 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 169 4.0E-22 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 ABD1_26620 4a66592669a75df779e26d24dd0545d0 174 Gene3D G3DSA:1.20.120.740 3 164 1.6E-6 T 12-10-2018 ABD1_26620 4a66592669a75df779e26d24dd0545d0 174 SUPERFAMILY SSF101327 4 172 2.48E-24 T 12-10-2018 IPR036255 YgfB-like superfamily ABD1_30210 1b4da119527cecb7818a03996afec466 423 Gene3D G3DSA:3.40.50.720 188 422 7.0E-84 T 12-10-2018 ABD1_30210 1b4da119527cecb7818a03996afec466 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 168 1.0E-55 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 SMART SM00839 189 419 2.4E-88 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 Gene3D G3DSA:3.40.50.10860 39 174 5.5E-84 T 12-10-2018 ABD1_30210 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 220 240 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 98 112 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 SUPERFAMILY SSF51735 187 422 5.74E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_30210 1b4da119527cecb7818a03996afec466 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 419 2.0E-71 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 SUPERFAMILY SSF53223 8 189 2.65E-70 T 12-10-2018 ABD1_30210 1b4da119527cecb7818a03996afec466 423 Gene3D G3DSA:1.10.8.1210 9 38 5.5E-84 T 12-10-2018 ABD1_30210 1b4da119527cecb7818a03996afec466 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 106 119 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_30210 1b4da119527cecb7818a03996afec466 423 PIRSF PIRSF000185 8 422 5.2E-160 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 Pfam PF00255 Glutathione peroxidase 4 110 2.6E-40 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 1.5E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.5E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.5E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 PIRSF PIRSF000303 1 161 3.7E-66 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 Gene3D G3DSA:3.40.30.10 1 161 5.5E-70 T 12-10-2018 ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 SUPERFAMILY SSF52833 3 159 1.07E-59 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_14680 f3d10500994ce084f32baf66056fc20e 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 Gene3D G3DSA:3.40.50.720 2 272 1.3E-68 T 12-10-2018 ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.7E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.7E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.7E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 Pfam PF00106 short chain dehydrogenase 3 200 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05760 d5e43ef58066a109a97e0542745622ca 273 SUPERFAMILY SSF51735 3 239 1.4E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_26220 b226e798319aac32a8054ac3449f0899 505 Gene3D G3DSA:1.10.8.870 399 467 2.3E-20 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 Gene3D G3DSA:3.50.50.60 13 372 3.1E-134 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26220 b226e798319aac32a8054ac3449f0899 505 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 7.8E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 SUPERFAMILY SSF51905 10 300 3.89E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26220 b226e798319aac32a8054ac3449f0899 505 Gene3D G3DSA:3.30.9.10 90 326 3.1E-134 T 12-10-2018 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 Pfam PF01266 FAD dependent oxidoreductase 13 333 2.2E-45 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 491 2.3E-15 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_26220 b226e798319aac32a8054ac3449f0899 505 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 358 368 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 10 426 5.9E-205 T 12-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 426 4.2E-26 T 12-10-2018 IPR028154 AMP-dependent ligase, C-terminal ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 Pfam PF00501 AMP-binding enzyme 14 287 3.7E-18 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 Gene3D G3DSA:3.40.50.12780 1 327 2.7E-131 T 12-10-2018 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 Gene3D G3DSA:3.30.300.30 328 427 9.3E-32 T 12-10-2018 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 SUPERFAMILY SSF56801 37 406 1.83E-63 T 12-10-2018 ABD1_13540 88a39eb96e58a5b628ab750264955fb1 429 PIRSF PIRSF006444 1 428 1.3E-201 T 12-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 13 256 1.9E-83 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 Gene3D G3DSA:3.40.190.10 116 216 1.1E-80 T 12-10-2018 ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 Gene3D G3DSA:3.40.190.10 32 255 1.1E-80 T 12-10-2018 ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 SMART SM00062 30 259 8.1E-72 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 3.8E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_23010 9107a2981b8a66d106081b3e8bb50e09 261 SUPERFAMILY SSF53850 5 259 3.65E-69 T 12-10-2018 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 471 2.8E-48 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Gene3D G3DSA:3.90.320.10 917 1229 1.2E-70 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Gene3D G3DSA:3.40.50.300 13 470 1.5E-74 T 12-10-2018 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Gene3D G3DSA:3.40.50.300 484 864 1.2E-71 T 12-10-2018 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1224 15.797 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 SUPERFAMILY SSF52540 15 860 1.08E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Gene3D G3DSA:1.10.486.10 611 757 1.2E-71 T 12-10-2018 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Pfam PF13361 UvrD-like helicase C-terminal domain 479 648 6.8E-11 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Pfam PF12705 PD-(D/E)XK nuclease superfamily 986 1196 5.0E-6 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Pfam PF13361 UvrD-like helicase C-terminal domain 687 857 3.5E-15 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 SUPERFAMILY SSF52980 923 1223 2.68E-61 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_03290 8e9fc2eedbb3d343b6dce7e6a9443ee3 1232 Gene3D G3DSA:1.10.3170.10 162 380 1.5E-74 T 12-10-2018 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 Gene3D G3DSA:3.40.630.30 298 450 2.1E-39 T 12-10-2018 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 SUPERFAMILY SSF55729 301 428 7.55E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 Pfam PF00696 Amino acid kinase family 33 272 8.5E-26 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 Pfam PF00583 Acetyltransferase (GNAT) family 331 410 7.1E-11 T 12-10-2018 IPR000182 GNAT domain ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 16 449 3.7E-182 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 PIRSF PIRSF000423 6 450 5.8E-193 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 Gene3D G3DSA:3.40.1160.10 14 297 2.3E-91 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 208.102 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ABD1_00290 257a32293f945e2ed4c4858a6e62be42 451 SUPERFAMILY SSF53633 11 297 7.96E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_14660 4703688e2fed0a69f322b89ea7752e52 476 Gene3D G3DSA:3.40.640.10 126 367 4.6E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_14660 4703688e2fed0a69f322b89ea7752e52 476 SUPERFAMILY SSF53383 71 472 3.4E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_14660 4703688e2fed0a69f322b89ea7752e52 476 Gene3D G3DSA:3.90.1150.10 94 471 4.6E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_14660 4703688e2fed0a69f322b89ea7752e52 476 Pfam PF00155 Aminotransferase class I and II 107 468 7.5E-50 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 Pfam PF02222 ATP-grasp domain 125 303 1.2E-50 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 399 4.3E-169 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.40.50.20 3 124 1.9E-49 T 12-10-2018 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF56059 115 321 1.13E-55 T 12-10-2018 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.30.470.20 199 402 4.2E-60 T 12-10-2018 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.30.1490.20 125 198 2.2E-31 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF52440 4 114 4.32E-29 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF51246 328 398 1.26E-16 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_14730 138e2e532307f0a362bd385571c1cac7 402 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.56 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 Pfam PF00593 TonB dependent receptor 211 703 2.8E-38 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 156 3.2E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 Gene3D G3DSA:2.170.130.10 63 164 3.8E-11 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 SUPERFAMILY SSF56935 44 704 6.11E-79 T 12-10-2018 ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 Gene3D G3DSA:2.40.170.20 168 704 4.4E-56 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_01700 150aeb37da5afc754ca526b1b3845bbb 704 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 61 704 7.6E-232 T 12-10-2018 IPR010100 TonB-dependent copper receptor ABD1_21430 0bf4289c8a81f39bb8233cd86ed2bf11 432 SUPERFAMILY SSF56112 79 351 2.4E-23 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_21430 0bf4289c8a81f39bb8233cd86ed2bf11 432 Pfam PF03109 ABC1 family 99 217 2.7E-31 T 12-10-2018 IPR004147 UbiB domain ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 187 268 2.0E-29 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 189 277 2.69E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 342 440 8.58E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 255 363 3.58E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 358 444 3.1E-25 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 269 357 1.5E-28 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.6E-210 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 189 260 2.4E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 18 86 3.6E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 361 434 2.5E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 450 520 1.9E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 190 260 5.8E-30 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 449 520 6.7E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 19 87 3.8E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 275 347 1.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 103 171 3.8E-11 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 362 434 8.0E-22 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PIRSF PIRSF002111 1 534 1.4E-212 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 103 184 8.58E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 5 99 3.6E-17 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 100 183 6.2E-9 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 445 528 4.4E-20 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-86 T 12-10-2018 ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 2 112 4.77E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_15810 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 429 533 2.24E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Gene3D G3DSA:1.10.150.240 7 78 3.4E-41 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 SUPERFAMILY SSF56784 1 208 1.37E-39 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 494 632 1.2E-9 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 171 3.7E-29 T 12-10-2018 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Gene3D G3DSA:3.40.50.1000 2 179 3.4E-41 T 12-10-2018 IPR023214 HAD superfamily ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Gene3D G3DSA:1.10.1040.10 510 675 5.5E-27 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 67 170 3.6E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 Gene3D G3DSA:3.40.50.720 232 448 5.9E-10 T 12-10-2018 ABD1_16430 b5f88f218b7ba66fc9b8a73897e1e0a6 700 SUPERFAMILY SSF48179 505 664 5.44E-15 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Pfam PF13533 Biotin-lipoyl like 60 101 7.1E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 SUPERFAMILY SSF111369 58 112 1.57E-7 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Gene3D G3DSA:2.40.50.100 60 90 1.9E-9 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Gene3D G3DSA:1.10.287.470 125 192 9.2E-13 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Gene3D G3DSA:1.10.287.470 91 121 1.9E-9 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 SUPERFAMILY SSF111369 135 298 1.09E-12 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Gene3D G3DSA:2.40.30.170 238 353 5.2E-37 T 12-10-2018 ABD1_17920 bae1e19b1d47d95a72ac047ddde4d40f 353 Pfam PF13437 HlyD family secretion protein 224 334 1.9E-16 T 12-10-2018 ABD1_19760 512bd97c624829bd54a88be8f670c241 484 Pfam PF00916 Sulfate permease family 144 356 5.9E-27 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABD1_19760 512bd97c624829bd54a88be8f670c241 484 Pfam PF00916 Sulfate permease family 14 142 3.4E-27 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABD1_19760 512bd97c624829bd54a88be8f670c241 484 SUPERFAMILY SSF52091 393 478 3.92E-11 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_19760 512bd97c624829bd54a88be8f670c241 484 Gene3D G3DSA:3.30.750.24 389 482 1.1E-26 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_19760 512bd97c624829bd54a88be8f670c241 484 Pfam PF01740 STAS domain 401 478 1.4E-8 T 12-10-2018 IPR002645 STAS domain ABD1_19760 512bd97c624829bd54a88be8f670c241 484 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 Gene3D G3DSA:1.20.140.170 30 184 8.7E-57 T 12-10-2018 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 Pfam PF01817 Chorismate mutase type II 36 103 1.1E-8 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 28 140 7.9E-38 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 PIRSF PIRSF026640 4 185 6.7E-49 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 SMART SM00830 34 105 1.8E-9 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_20850 e0ac149897041082f0c709aaea3a9f64 185 SUPERFAMILY SSF48600 37 182 3.0E-33 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_19490 af8b5708ef1a593c8273a2491ce823b9 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 19 95 8.2E-24 T 12-10-2018 IPR011846 Cyd operon protein YbgE ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 381 1.4E-16 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 Gene3D G3DSA:1.20.140.10 228 405 1.0E-53 T 12-10-2018 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 PIRSF PIRSF016578 4 90 4.4E-7 T 12-10-2018 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 PIRSF PIRSF016578 141 394 1.4E-22 T 12-10-2018 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 SUPERFAMILY SSF56645 25 227 1.23E-35 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 Gene3D G3DSA:1.10.540.10 13 128 5.8E-18 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 Gene3D G3DSA:2.40.110.10 129 227 1.2E-26 T 12-10-2018 ABD1_03640 597c1c912e4f17aa6fd395c73b514ca0 416 SUPERFAMILY SSF47203 238 382 6.09E-13 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 SUPERFAMILY SSF46689 2 49 1.69E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 SUPERFAMILY SSF48498 48 133 2.97E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 121 166 1.1E-5 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 Gene3D G3DSA:1.10.10.60 1 26 2.8E-5 T 12-10-2018 ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 27 3.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18230 09ac9ee7a670ec5b9fac27dfe67b0c23 173 Gene3D G3DSA:1.10.357.10 27 171 9.4E-32 T 12-10-2018 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 3.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 3.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 Pfam PF14525 AraC-binding-like domain 12 129 1.3E-6 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 Gene3D G3DSA:1.10.10.60 192 303 1.0E-28 T 12-10-2018 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 295 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 SMART SM00342 214 299 4.2E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 Pfam PF12833 Helix-turn-helix domain 220 300 1.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18780 9fd136dd14fb9bb07c30b6294c4b629e 304 SUPERFAMILY SSF46689 250 302 4.48E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_27020 0d9ae67dcdf97a0cfe4121f9c9889905 208 SMART SM00563 46 158 1.0E-18 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_27020 0d9ae67dcdf97a0cfe4121f9c9889905 208 SUPERFAMILY SSF69593 19 157 3.4E-19 T 12-10-2018 ABD1_27020 0d9ae67dcdf97a0cfe4121f9c9889905 208 Pfam PF01553 Acyltransferase 46 151 2.2E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF109604 31 229 5.34E-44 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF13291 ACT domain 689 763 2.5E-18 T 12-10-2018 IPR002912 ACT domain ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 762 3.6E-170 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.30.460.10 232 363 5.0E-50 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:1.10.3210.10 24 230 1.0E-40 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 SMART SM00954 274 383 1.5E-59 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.30.70.260 690 766 2.7E-17 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF81271 433 493 2.18E-18 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF13328 HD domain 68 214 2.5E-37 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF02824 TGS domain 434 493 1.1E-18 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF55021 689 766 3.71E-13 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 1.7E-33 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF81301 231 395 1.52E-58 T 12-10-2018 ABD1_05850 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.10.20.30 431 502 1.2E-28 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 Pfam PF08223 PaaX-like protein C-terminal domain 189 282 9.8E-24 T 12-10-2018 IPR013225 PaaX-like, C-terminal ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 305 1.7E-79 T 12-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 Gene3D G3DSA:1.10.10.10 19 101 2.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 Pfam PF07848 PaaX-like protein 20 87 4.5E-22 T 12-10-2018 IPR012906 PaaX-like, N-terminal ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 Gene3D G3DSA:1.20.58.1460 213 288 3.2E-5 T 12-10-2018 ABD1_13550 e37d340f3b640fb37592b87342b9238f 319 PIRSF PIRSF020623 1 308 2.6E-93 T 12-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 26 274 1.8E-51 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 3 410 2.1E-97 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Pfam PF00550 Phosphopantetheine attachment site 444 513 1.2E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 9.8E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 510 523 9.8E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 9.8E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 178 191 9.8E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 9.8E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 SUPERFAMILY SSF50621 257 411 2.03E-33 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 SUPERFAMILY SSF47336 438 516 6.41E-10 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Gene3D G3DSA:2.40.37.10 10 409 7.4E-113 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 8.1E-5 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01181 Diaminopimelate decarboxylase signature 152 161 8.1E-5 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 PRINTS PR01181 Diaminopimelate decarboxylase signature 64 81 8.1E-5 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 SUPERFAMILY SSF51419 16 276 5.37E-67 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 20 369 4.7E-14 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Gene3D G3DSA:3.20.20.10 24 270 7.4E-113 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_01100 dc8d564735ee812d5c57820434e10359 533 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 230 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ABD1_01100 dc8d564735ee812d5c57820434e10359 533 ProSitePatterns PS00012 Phosphopantetheine attachment site. 469 484 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site ABD1_01100 dc8d564735ee812d5c57820434e10359 533 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABD1_01100 dc8d564735ee812d5c57820434e10359 533 Gene3D G3DSA:1.10.1200.10 427 523 7.8E-13 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_00680 598a2d6655938dffd91b2ac20952a075 338 SUPERFAMILY SSF51735 1 337 1.85E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00680 598a2d6655938dffd91b2ac20952a075 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 2.5E-136 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ABD1_00680 598a2d6655938dffd91b2ac20952a075 338 Gene3D G3DSA:3.40.50.720 4 275 4.9E-135 T 12-10-2018 ABD1_00680 598a2d6655938dffd91b2ac20952a075 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 8.4E-55 T 12-10-2018 IPR016040 NAD(P)-binding domain ABD1_00680 598a2d6655938dffd91b2ac20952a075 338 Gene3D G3DSA:3.90.25.10 195 330 4.9E-135 T 12-10-2018 ABD1_00600 d80c450dbb7f058421acd8beeb056d6e 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 2.2E-64 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABD1_00600 d80c450dbb7f058421acd8beeb056d6e 376 Gene3D G3DSA:3.40.50.2000 7 187 2.9E-102 T 12-10-2018 ABD1_00600 d80c450dbb7f058421acd8beeb056d6e 376 SUPERFAMILY SSF53756 3 375 9.63E-110 T 12-10-2018 ABD1_00600 d80c450dbb7f058421acd8beeb056d6e 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 361 1.3E-89 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABD1_00600 d80c450dbb7f058421acd8beeb056d6e 376 Gene3D G3DSA:3.40.50.2000 188 326 2.9E-102 T 12-10-2018 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.5E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF52172 5 130 5.27E-40 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:1.10.10.10 132 231 9.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 SMART SM00862 152 227 6.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 SMART SM00448 4 118 3.7E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00072 Response regulator receiver domain 6 119 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:3.40.50.2300 2 131 2.5E-36 T 12-10-2018 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF46894 130 228 5.1E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_32770 425954f2d33ed14be4dd2527293011a0 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 2.5E-101 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 ABD1_04230 f05c7cebcaf4f974043fbe2679d51fe2 251 Gene3D G3DSA:3.30.1150.10 129 249 2.8E-12 T 12-10-2018 ABD1_04230 f05c7cebcaf4f974043fbe2679d51fe2 251 SUPERFAMILY SSF74653 151 251 1.83E-14 T 12-10-2018 ABD1_04230 f05c7cebcaf4f974043fbe2679d51fe2 251 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 247 6.0E-13 T 12-10-2018 IPR006260 TonB/TolA, C-terminal ABD1_04230 f05c7cebcaf4f974043fbe2679d51fe2 251 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 189 247 2.6E-12 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 SUPERFAMILY SSF52540 315 564 4.77E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 SUPERFAMILY SSF52540 10 263 1.57E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Pfam PF00005 ABC transporter 32 191 1.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Pfam PF00005 ABC transporter 341 491 2.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Gene3D G3DSA:3.40.50.300 313 575 4.8E-83 T 12-10-2018 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Gene3D G3DSA:3.40.50.300 8 305 1.6E-81 T 12-10-2018 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 272 0.14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 570 0.0018 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 SMART SM00382 349 542 4.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_16000 8635046073ab2c1fc1c748b1cb7ace75 576 SMART SM00382 40 241 4.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 SUPERFAMILY SSF53850 95 298 7.14E-41 T 12-10-2018 ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 Pfam PF03466 LysR substrate binding domain 92 296 1.3E-45 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 Gene3D G3DSA:1.10.10.10 1 84 4.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 SUPERFAMILY SSF46785 3 91 2.16E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 Gene3D G3DSA:3.40.190.290 95 300 5.8E-48 T 12-10-2018 ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14150 461de136d827c5bcecd25a8028c992fa 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 67 2.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 PRINTS PR00982 Lysyl-tRNA synthetase signature 275 292 6.0E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 PRINTS PR00982 Lysyl-tRNA synthetase signature 400 416 6.0E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 PRINTS PR00982 Lysyl-tRNA synthetase signature 212 222 6.0E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 PRINTS PR00982 Lysyl-tRNA synthetase signature 257 270 6.0E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 PRINTS PR00982 Lysyl-tRNA synthetase signature 228 244 6.0E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 Pfam PF01336 OB-fold nucleic acid binding domain 86 159 2.9E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 Gene3D G3DSA:3.30.930.10 171 520 4.2E-127 T 12-10-2018 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 31 517 1.4E-197 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 33 518 43.547 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 Gene3D G3DSA:2.40.50.140 19 170 1.1E-32 T 12-10-2018 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 Pfam PF00152 tRNA synthetases class II (D, K and N) 176 515 5.2E-79 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 SUPERFAMILY SSF50249 26 168 3.43E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_09510 0cc20ef80949eeecac209ab312add59f 520 SUPERFAMILY SSF55681 175 516 8.76E-115 T 12-10-2018 ABD1_30820 9360992e4630bcde8118fe9d50c74e9a 268 SUPERFAMILY SSF53335 2 255 5.47E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_30820 9360992e4630bcde8118fe9d50c74e9a 268 PIRSF PIRSF018249 1 263 6.1E-89 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 ABD1_30820 9360992e4630bcde8118fe9d50c74e9a 268 Gene3D G3DSA:3.40.50.150 1 264 3.2E-74 T 12-10-2018 ABD1_30820 9360992e4630bcde8118fe9d50c74e9a 268 Pfam PF08241 Methyltransferase domain 84 168 1.9E-12 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABD1_18050 fcf4b2ecc23607c4a9331f66987a50da 350 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 9.3E-31 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABD1_18050 fcf4b2ecc23607c4a9331f66987a50da 350 SUPERFAMILY SSF51658 17 344 1.33E-57 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily ABD1_18050 fcf4b2ecc23607c4a9331f66987a50da 350 Gene3D G3DSA:3.20.20.150 14 325 4.2E-69 T 12-10-2018 ABD1_18050 fcf4b2ecc23607c4a9331f66987a50da 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 9.5E-21 T 12-10-2018 IPR011418 AP endonuclease, family 2, C-terminal ABD1_03570 837c57791456437d97ff4faadbee3c51 401 Gene3D G3DSA:3.50.50.60 6 392 9.5E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03570 837c57791456437d97ff4faadbee3c51 401 Gene3D G3DSA:1.10.8.260 271 324 9.5E-63 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily ABD1_03570 837c57791456437d97ff4faadbee3c51 401 SUPERFAMILY SSF160996 204 341 2.35E-16 T 12-10-2018 ABD1_03570 837c57791456437d97ff4faadbee3c51 401 SUPERFAMILY SSF51905 1 396 1.1E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03570 837c57791456437d97ff4faadbee3c51 401 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 3.1E-78 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABD1_03570 837c57791456437d97ff4faadbee3c51 401 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 2.3E-6 T 12-10-2018 ABD1_03570 837c57791456437d97ff4faadbee3c51 401 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 2.3E-6 T 12-10-2018 ABD1_03570 837c57791456437d97ff4faadbee3c51 401 Gene3D G3DSA:2.40.30.10 192 341 9.5E-63 T 12-10-2018 ABD1_03570 837c57791456437d97ff4faadbee3c51 401 Pfam PF03486 HI0933-like protein 5 393 4.8E-83 T 12-10-2018 ABD1_03570 837c57791456437d97ff4faadbee3c51 401 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 26 400 1.1E-187 T 12-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 Pfam PF12833 Helix-turn-helix domain 188 265 1.2E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 SUPERFAMILY SSF46689 217 266 2.33E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 Gene3D G3DSA:1.10.10.60 161 268 3.8E-28 T 12-10-2018 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 SMART SM00342 182 264 7.5E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_31330 d3fefb4f69711df470d1904208ed8205 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82693 137 331 6.1E-22 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82693 39 131 8.2E-26 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82714 183 273 2.88E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.4E-99 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1029 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82693 669 844 6.8E-13 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82866 828 1021 4.45E-41 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82693 562 668 1.41E-20 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82866 297 498 4.19E-50 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Pfam PF00873 AcrB/AcrD/AcrF family 3 1021 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 12-10-2018 ABD1_26130 575d7fe83aea411da33ee09eb496c1bf 1031 SUPERFAMILY SSF82714 721 804 2.22E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 Pfam PF03309 Type III pantothenate kinase 4 198 3.0E-43 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 235 5.0E-26 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 Gene3D G3DSA:3.30.420.40 6 234 1.0E-47 T 12-10-2018 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 SUPERFAMILY SSF53067 4 112 7.51E-22 T 12-10-2018 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 Gene3D G3DSA:3.30.420.490 119 227 1.0E-47 T 12-10-2018 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 SUPERFAMILY SSF53067 118 241 7.12E-26 T 12-10-2018 ABD1_07500 b9f559dc72e40a2431cee644dde469ab 245 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 242 19.329 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 Gene3D G3DSA:3.30.1340.10 1 88 1.3E-25 T 12-10-2018 IPR035895 HPr-like superfamily ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.6E-11 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.6E-11 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.6E-11 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.6E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 SUPERFAMILY SSF55594 1 87 3.93E-24 T 12-10-2018 IPR035895 HPr-like superfamily ABD1_05940 cd6cb6b64e1b3031016ace39538d86ba 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 5.4E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 470 488 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 502 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 502 515 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 266 284 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 343 364 1.5E-50 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 SUPERFAMILY SSF53697 26 551 4.45E-179 T 12-10-2018 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 Pfam PF00342 Phosphoglucose isomerase 55 547 1.4E-174 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 Gene3D G3DSA:3.40.50.10490 18 511 8.0E-206 T 12-10-2018 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 270 283 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 Gene3D G3DSA:3.40.50.10490 101 296 8.0E-206 T 12-10-2018 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 Gene3D G3DSA:1.10.1390.10 512 553 9.2E-15 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 529 39.336 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_00670 0eebe9b0ad93f125a5c304427f84fd9d 556 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 502 519 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1031 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-96 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.70.1430 38 811 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.70.1430 566 662 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.70.1440 663 859 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82693 38 130 1.15E-22 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:1.20.1640.10 512 1016 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82693 564 663 8.37E-24 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.2090.10 715 803 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82714 183 272 5.1E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82866 802 1021 6.8E-42 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82866 296 497 1.23E-50 T 12-10-2018 ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82714 719 800 1.44E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_17690 345b5ff545c2b68febbab9400d95683a 1035 SUPERFAMILY SSF82693 135 329 8.89E-26 T 12-10-2018 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 SUPERFAMILY SSF53850 90 291 8.07E-38 T 12-10-2018 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 Pfam PF03466 LysR substrate binding domain 89 290 3.2E-39 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 Gene3D G3DSA:1.10.10.10 1 90 1.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 Gene3D G3DSA:3.40.190.290 91 292 5.0E-45 T 12-10-2018 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 SUPERFAMILY SSF46785 1 83 6.16E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17280 f53d36691936cd2eb168254e4f8991ae 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_32380 f517cf9e0df3b2aac706e445b98624d8 274 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 1.6E-64 T 12-10-2018 ABD1_32380 f517cf9e0df3b2aac706e445b98624d8 274 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 4.5E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABD1_32380 f517cf9e0df3b2aac706e445b98624d8 274 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 1.6E-67 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ABD1_32380 f517cf9e0df3b2aac706e445b98624d8 274 SUPERFAMILY SSF56219 14 271 9.42E-71 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_32380 f517cf9e0df3b2aac706e445b98624d8 274 Gene3D G3DSA:3.60.10.10 12 273 1.3E-78 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_30490 33b2a32375c34894eae265218551dce7 83 SUPERFAMILY SSF54565 1 75 5.36E-29 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30490 33b2a32375c34894eae265218551dce7 83 Gene3D G3DSA:3.30.1320.10 1 82 6.2E-32 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30490 33b2a32375c34894eae265218551dce7 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.603 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30490 33b2a32375c34894eae265218551dce7 83 Pfam PF00886 Ribosomal protein S16 8 68 6.3E-26 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30490 33b2a32375c34894eae265218551dce7 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-29 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30490 33b2a32375c34894eae265218551dce7 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 Gene3D G3DSA:1.10.3860.10 1 420 3.5E-115 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.3E-37 T 12-10-2018 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 Pfam PF00375 Sodium:dicarboxylate symporter family 6 408 1.5E-104 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_14650 6c5df434df71b664cb3217ca514d3281 435 SUPERFAMILY SSF118215 6 410 1.44E-110 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_01080 1824c3f3b47f036c6c4402bea1d9bc31 341 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 329 1.4E-98 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ABD1_01080 1824c3f3b47f036c6c4402bea1d9bc31 341 Gene3D G3DSA:3.90.226.10 3 338 9.1E-99 T 12-10-2018 ABD1_01080 1824c3f3b47f036c6c4402bea1d9bc31 341 SUPERFAMILY SSF52096 3 329 3.37E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_22430 c6ee7c91287268a8e9de8c06ebf1f119 478 SUPERFAMILY SSF48452 299 455 5.69E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_22430 c6ee7c91287268a8e9de8c06ebf1f119 478 Gene3D G3DSA:3.30.2010.10 67 147 2.3E-7 T 12-10-2018 ABD1_22430 c6ee7c91287268a8e9de8c06ebf1f119 478 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 476 35.596 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 ABD1_22430 c6ee7c91287268a8e9de8c06ebf1f119 478 Gene3D G3DSA:1.25.40.10 249 476 6.9E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_22430 c6ee7c91287268a8e9de8c06ebf1f119 478 Pfam PF01435 Peptidase family M48 77 256 3.7E-32 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 Gene3D G3DSA:1.10.10.10 255 317 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13960 c52e0623f7263a71c686c85baacda843 319 Pfam PF00196 Bacterial regulatory proteins, luxR family 256 309 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 Pfam PF00072 Response regulator receiver domain 19 130 2.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 SMART SM00421 254 311 3.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 SUPERFAMILY SSF52172 12 149 2.42E-37 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_13960 c52e0623f7263a71c686c85baacda843 319 SUPERFAMILY SSF46894 245 311 1.8E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 SMART SM00448 17 130 4.9E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 299 5.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 271 5.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 271 287 5.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 Gene3D G3DSA:3.40.50.12740 16 190 5.2E-41 T 12-10-2018 ABD1_13960 c52e0623f7263a71c686c85baacda843 319 ProSitePatterns PS00622 LuxR-type HTH domain signature. 271 298 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 Gene3D G3DSA:1.10.8.60 360 443 2.2E-7 T 12-10-2018 ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 5 183 3.9E-79 T 12-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 Gene3D G3DSA:3.40.50.300 169 359 3.3E-51 T 12-10-2018 ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 Pfam PF00158 Sigma-54 interaction domain 186 353 1.2E-50 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 PIRSF PIRSF037354 4 533 1.3E-234 T 12-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 SMART SM00382 206 352 1.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_22660 d415eb65a2bd65824e0b3d67216f9b90 533 SUPERFAMILY SSF52540 187 437 2.36E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04400 d226e42485f4b63f2696f8ec36eca273 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 1.9E-52 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ABD1_04400 d226e42485f4b63f2696f8ec36eca273 208 Pfam PF01725 Ham1 family 12 204 1.2E-52 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ABD1_04400 d226e42485f4b63f2696f8ec36eca273 208 SUPERFAMILY SSF52972 6 207 2.62E-66 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_04400 d226e42485f4b63f2696f8ec36eca273 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 48.172 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 ABD1_04400 d226e42485f4b63f2696f8ec36eca273 208 Gene3D G3DSA:3.90.950.10 8 208 7.5E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 240 252 2.4E-8 T 12-10-2018 IPR006015 Universal stress protein A ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 1 11 2.4E-8 T 12-10-2018 IPR006015 Universal stress protein A ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 258 280 2.4E-8 T 12-10-2018 IPR006015 Universal stress protein A ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 SUPERFAMILY SSF52402 166 280 2.09E-19 T 12-10-2018 ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 Gene3D G3DSA:3.40.50.12370 2 280 1.1E-46 T 12-10-2018 ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 Pfam PF00582 Universal stress protein family 213 280 1.1E-10 T 12-10-2018 IPR006016 UspA ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 Pfam PF00582 Universal stress protein family 2 156 1.4E-5 T 12-10-2018 IPR006016 UspA ABD1_12690 86ba4a720299cecbe39504d48fcf19aa 280 SUPERFAMILY SSF52402 1 157 1.59E-11 T 12-10-2018 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 PIRSF PIRSF006641 1 363 1.6E-156 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.4E-160 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.6E-41 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 SUPERFAMILY SSF81271 279 360 7.19E-38 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:3.40.50.300 4 278 5.3E-153 T 12-10-2018 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 SUPERFAMILY SSF52540 3 301 4.04E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:3.10.20.30 48 361 5.3E-153 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.249 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 8.4E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_14810 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:1.10.150.300 113 200 5.3E-153 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 255 1.6E-89 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 Hamap MF_00186 Glycerol kinase [glpK]. 6 500 59.399 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 453 1.6E-64 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 SUPERFAMILY SSF53067 257 500 3.89E-86 T 12-10-2018 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 Gene3D G3DSA:3.30.420.40 257 502 6.9E-94 T 12-10-2018 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 7 499 9.9E-229 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 Gene3D G3DSA:3.30.420.40 5 256 1.2E-111 T 12-10-2018 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 SUPERFAMILY SSF53067 7 258 1.01E-97 T 12-10-2018 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABD1_26230 bc8e31a28f4be9b6861ee59a36646e6f 502 PIRSF PIRSF000538 6 502 1.4E-181 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 SUPERFAMILY SSF55282 3 178 2.59E-77 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Gene3D G3DSA:3.30.1440.10 1 178 3.1E-79 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-42 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-27 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.334 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29540 80c69eefd9fdc59ce0e2e2d53c7551b2 178 PIRSF PIRSF002161 1 178 2.8E-67 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_32090 1336ad353277041199f3ad81665ff539 352 SUPERFAMILY SSF51395 1 349 9.95E-113 T 12-10-2018 ABD1_32090 1336ad353277041199f3ad81665ff539 352 Gene3D G3DSA:3.20.20.70 1 352 2.1E-131 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_32090 1336ad353277041199f3ad81665ff539 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.5E-81 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 Pfam PF00083 Sugar (and other) transporter 30 215 1.6E-28 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 Pfam PF00083 Sugar (and other) transporter 227 433 4.9E-13 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 SUPERFAMILY SSF103473 22 433 4.97E-66 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 Gene3D G3DSA:1.20.1250.20 20 438 3.7E-69 T 12-10-2018 ABD1_26240 580ebdfddbab07bb56d98499a5ca0f72 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_09390 45803ed275a855c653e4771ec3d8d653 230 SUPERFAMILY SSF52540 6 226 1.77E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09390 45803ed275a855c653e4771ec3d8d653 230 SMART SM00382 34 223 9.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_09390 45803ed275a855c653e4771ec3d8d653 230 Pfam PF00005 ABC transporter 25 174 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_09390 45803ed275a855c653e4771ec3d8d653 230 Gene3D G3DSA:3.40.50.300 4 229 8.4E-67 T 12-10-2018 ABD1_09390 45803ed275a855c653e4771ec3d8d653 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 Gene3D G3DSA:3.40.50.880 561 712 3.7E-30 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 Gene3D G3DSA:2.40.180.10 2 457 2.2E-214 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PIRSF PIRSF038927 4 710 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 Pfam PF00199 Catalase 45 430 4.2E-178 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 Gene3D G3DSA:1.20.1370.20 460 560 8.7E-34 T 12-10-2018 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 SUPERFAMILY SSF56634 22 545 9.42E-223 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 58 81 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 330 357 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 161 179 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 121 139 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 362 388 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 PRINTS PR00067 Catalase signature 142 159 3.6E-69 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 SUPERFAMILY SSF52317 559 708 2.06E-12 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 375 383 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 SMART SM01060 45 433 2.9E-270 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_13870 f311e4446fb807a38db74ca3675d381c 712 Pfam PF06628 Catalase-related immune-responsive 462 527 8.7E-19 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.4E-176 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.2E-108 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 Gene3D G3DSA:3.65.10.10 21 229 1.3E-176 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 SUPERFAMILY SSF55205 1 417 9.55E-144 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 Gene3D G3DSA:3.65.10.10 6 414 1.3E-176 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABD1_06330 664882856b3d7dc7df3578b8a6bbf3a8 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.358 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_31920 466d52c9c0b21b60da1c01d090d7b4d0 301 Pfam PF16956 Putative general bacterial porin 2 299 1.2E-16 T 12-10-2018 IPR031593 Putative general bacterial porin ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF00633 Helix-hairpin-helix motif 105 132 3.2E-8 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 SUPERFAMILY SSF48150 6 211 4.24E-71 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 2.0E-17 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Gene3D G3DSA:1.10.340.30 26 137 1.0E-76 T 12-10-2018 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Gene3D G3DSA:1.10.1670.10 16 208 1.0E-76 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.9E-6 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 TIGRFAM TIGR01083 nth: endonuclease III 9 199 8.7E-84 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 Hamap MF_00942 Endonuclease III [nth]. 3 214 36.948 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 SMART SM00478 43 190 2.4E-52 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 PIRSF PIRSF001435 3 214 3.5E-53 T 12-10-2018 ABD1_09800 cd548d44368a2c27a464e9dc139a81dc 230 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:2.40.50.140 624 696 3.4E-29 T 12-10-2018 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 5.8E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 1.0E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF55666 452 550 2.38E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF00575 S1 RNA binding domain 621 692 6.0E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SMART SM00316 622 692 3.5E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54791 558 642 4.55E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF50249 622 695 1.64E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 322 8.2E-21 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.230.70 233 551 9.2E-111 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.1370.10 552 623 9.7E-20 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 PIRSF PIRSF005499 3 697 6.7E-284 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.230.70 1 231 6.8E-75 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.772 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF46915 240 323 9.68E-18 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF00013 KH domain 559 615 2.1E-12 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54211 3 145 1.16E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54211 299 490 4.1E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF55666 146 236 4.77E-30 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 SMART SM00322 554 619 3.5E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 1.7E-5 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_03330 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 4.2E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.50.100 246 282 1.4E-17 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.50.100 62 95 6.1E-11 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 ProSitePatterns PS00543 HlyD family secretion proteins signature. 361 383 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 SUPERFAMILY SSF111369 71 207 6.15E-8 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 258 279 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 376 396 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 338 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 376 9.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 187 396 1.9E-62 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Pfam PF13437 HlyD family secretion protein 246 354 1.2E-17 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:1.10.287.470 149 245 1.4E-17 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:1.10.287.470 96 124 6.1E-11 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Pfam PF13533 Biotin-lipoyl like 68 100 5.5E-9 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.30.170 50 60 6.1E-11 T 12-10-2018 ABD1_12660 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.30.170 283 374 1.4E-17 T 12-10-2018 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 PIRSF PIRSF001434 7 403 2.9E-133 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 3.9E-176 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 21 401 53.527 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 Gene3D G3DSA:3.40.640.10 14 266 7.5E-88 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 1.3E-139 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 Gene3D G3DSA:3.90.1150.10 269 403 2.5E-51 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_16730 248ae730c273414ed3ff693f21f03b85 403 SUPERFAMILY SSF53383 37 401 8.74E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 Gene3D G3DSA:3.30.1330.60 75 217 1.1E-47 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 SUPERFAMILY SSF103088 101 213 2.75E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 113 135 2.2E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 143 158 2.2E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 158 174 2.2E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 158 175 2.1E-11 T 12-10-2018 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 216 2.1E-11 T 12-10-2018 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 195 2.1E-11 T 12-10-2018 ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 Pfam PF00691 OmpA family 112 207 9.8E-26 T 12-10-2018 IPR006665 OmpA-like domain ABD1_08300 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 ProSitePatterns PS01068 OmpA-like domain. 145 189 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ABD1_21970 e1cbeebc3def11f80e0731facf4b8abe 303 SUPERFAMILY SSF103481 190 290 1.44E-5 T 12-10-2018 ABD1_21970 e1cbeebc3def11f80e0731facf4b8abe 303 Pfam PF00892 EamA-like transporter family 158 286 2.3E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_21970 e1cbeebc3def11f80e0731facf4b8abe 303 SUPERFAMILY SSF103481 40 140 7.19E-6 T 12-10-2018 ABD1_32790 9025bab94cda643a7f2e287e9a47899f 375 Pfam PF03583 Secretory lipase 111 329 5.7E-15 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_32790 9025bab94cda643a7f2e287e9a47899f 375 PIRSF PIRSF029171 5 371 7.6E-85 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_32790 9025bab94cda643a7f2e287e9a47899f 375 SUPERFAMILY SSF53474 57 361 3.76E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32790 9025bab94cda643a7f2e287e9a47899f 375 Gene3D G3DSA:3.40.50.1820 286 375 2.9E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32790 9025bab94cda643a7f2e287e9a47899f 375 Gene3D G3DSA:3.40.50.1820 5 251 1.3E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 SUPERFAMILY SSF111304 3 197 4.58E-75 T 12-10-2018 IPR023627 Recombination protein RecR ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 Gene3D G3DSA:3.40.1360.10 76 197 3.4E-44 T 12-10-2018 ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 SMART SM00493 79 164 1.4E-17 T 12-10-2018 IPR006171 TOPRIM domain ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 Gene3D G3DSA:1.10.8.420 2 51 1.2E-14 T 12-10-2018 ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 7.4E-74 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 96.091 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 Pfam PF02132 RecR protein 41 77 1.4E-13 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 Pfam PF13662 Toprim domain 81 170 8.5E-24 T 12-10-2018 IPR006171 TOPRIM domain ABD1_16760 f14861fef3a4f8438f75e130b55a9c49 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 ABD1_23620 90ed2806e47f816a2618ff3e310105d1 383 Gene3D G3DSA:3.40.710.10 23 383 1.2E-147 T 12-10-2018 ABD1_23620 90ed2806e47f816a2618ff3e310105d1 383 SUPERFAMILY SSF56601 29 381 2.13E-87 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_23620 90ed2806e47f816a2618ff3e310105d1 383 Pfam PF00144 Beta-lactamase 36 380 1.4E-65 T 12-10-2018 IPR001466 Beta-lactamase-related ABD1_23620 90ed2806e47f816a2618ff3e310105d1 383 ProSitePatterns PS00336 Beta-lactamase class-C active site. 84 91 - T 12-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Pfam PF11741 AMIN domain 39 118 1.1E-7 T 12-10-2018 IPR021731 AMIN domain ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 659 692 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Pfam PF03958 Bacterial type II/III secretion system short domain 360 455 1.0E-12 T 12-10-2018 IPR005644 NolW-like ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 SMART SM00965 286 334 5.5E-11 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Pfam PF07660 Secretin and TonB N terminus short domain 291 333 2.5E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 261 714 9.2E-165 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:2.60.40.3500 17 125 1.9E-5 T 12-10-2018 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Pfam PF00263 Bacterial type II and III secretion system protein 555 713 2.0E-49 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 575 3.4E-19 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 465 3.4E-19 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 701 715 3.4E-19 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 678 696 3.4E-19 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:3.55.50.30 261 331 3.8E-9 T 12-10-2018 ABD1_30760 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:2.60.40.3470 126 247 3.1E-27 T 12-10-2018 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 Gene3D G3DSA:3.40.640.10 58 328 6.4E-167 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 48.947 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 Gene3D G3DSA:3.90.1150.10 8 411 6.4E-167 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 419 1.1E-183 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 Pfam PF00202 Aminotransferase class-III 23 418 2.0E-130 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 SUPERFAMILY SSF53383 5 421 8.88E-132 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 PIRSF PIRSF000521 23 142 3.3E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 PIRSF PIRSF000521 165 422 4.2E-23 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_07620 d1c11188a40265622a4895e2ae9d4f5d 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 Pfam PF00501 AMP-binding enzyme 31 466 2.9E-110 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 Gene3D G3DSA:3.30.300.310 463 559 2.3E-32 T 12-10-2018 ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 549 3.1E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 Gene3D G3DSA:3.40.50.12780 13 462 5.3E-116 T 12-10-2018 ABD1_01930 914c2b21d6f6263e4c6bb91b3d47ee14 559 SUPERFAMILY SSF56801 20 558 9.68E-152 T 12-10-2018 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 Pfam PF00083 Sugar (and other) transporter 29 442 1.4E-56 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 311 328 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 Gene3D G3DSA:1.20.1250.20 24 444 1.4E-73 T 12-10-2018 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 SUPERFAMILY SSF103473 21 442 9.55E-74 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 427 2.8E-139 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 Pfam PF08946 Osmosensory transporter coiled coil 451 494 7.6E-15 T 12-10-2018 IPR015041 Osmosensory transporter coiled coil ABD1_22080 3e9240f4ff8b1e66d4a7cf4a7c6b2451 495 SUPERFAMILY SSF103661 461 493 6.02E-11 T 12-10-2018 IPR036292 Proline/betaine transporter ProP, C-terminal ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 Gene3D G3DSA:3.40.1280.10 1 158 3.1E-52 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 2.1E-53 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 SUPERFAMILY SSF75217 1 156 9.42E-51 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 PIRSF PIRSF004505 1 158 3.3E-50 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.453 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABD1_09850 50a9d11c72833ddb084a487dbaaee609 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 9.4E-51 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Gene3D G3DSA:1.10.275.10 4 137 6.4E-59 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.7E-35 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.7E-35 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.7E-35 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.7E-35 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Pfam PF00206 Lyase 11 341 1.0E-114 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Gene3D G3DSA:1.20.200.10 138 405 2.1E-118 T 12-10-2018 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 91.329 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 1.0E-230 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 SUPERFAMILY SSF48557 3 461 1.52E-160 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Pfam PF10415 Fumarase C C-terminus 407 459 9.4E-26 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 8.6E-5 T 12-10-2018 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 8.6E-5 T 12-10-2018 ABD1_20130 608199c9a1d3a52b16e0f8e09b137426 464 Gene3D G3DSA:1.10.40.30 406 464 9.7E-28 T 12-10-2018 ABD1_33160 477c1599496343216d9a759a5f8034fb 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 1.0E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_33160 477c1599496343216d9a759a5f8034fb 210 SUPERFAMILY SSF47616 80 208 1.39E-36 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_33160 477c1599496343216d9a759a5f8034fb 210 Gene3D G3DSA:3.40.30.10 1 87 5.9E-26 T 12-10-2018 ABD1_33160 477c1599496343216d9a759a5f8034fb 210 Pfam PF14497 Glutathione S-transferase, C-terminal domain 124 197 3.6E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_33160 477c1599496343216d9a759a5f8034fb 210 SUPERFAMILY SSF52833 1 89 2.24E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_33160 477c1599496343216d9a759a5f8034fb 210 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 208 4.2E-89 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 ABD1_33160 477c1599496343216d9a759a5f8034fb 210 Gene3D G3DSA:1.20.1050.10 88 210 2.8E-53 T 12-10-2018 ABD1_06510 e15090f7c001c3b90344e624dc1bd03a 282 Gene3D G3DSA:3.40.50.1820 1 279 4.3E-87 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_06510 e15090f7c001c3b90344e624dc1bd03a 282 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 275 3.7E-119 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 ABD1_06510 e15090f7c001c3b90344e624dc1bd03a 282 SUPERFAMILY SSF53474 1 273 7.32E-78 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_06510 e15090f7c001c3b90344e624dc1bd03a 282 Pfam PF00756 Putative esterase 21 270 5.7E-53 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ABD1_12760 216e5cf9156214b0a95c85746970bbe8 286 Pfam PF00892 EamA-like transporter family 146 275 4.4E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_12760 216e5cf9156214b0a95c85746970bbe8 286 SUPERFAMILY SSF103481 181 281 1.23E-11 T 12-10-2018 ABD1_12760 216e5cf9156214b0a95c85746970bbe8 286 SUPERFAMILY SSF103481 46 134 3.01E-6 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 1.5E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 1.5E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 Gene3D G3DSA:3.50.50.60 473 627 9.9E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 Gene3D G3DSA:3.20.20.70 3 369 3.5E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 3.7E-88 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 SUPERFAMILY SSF51905 471 629 8.87E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.9E-17 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 3.9E-17 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 3.9E-17 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 3.9E-17 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 Gene3D G3DSA:3.40.50.720 376 667 9.9E-115 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 637 3.4E-22 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 SUPERFAMILY SSF51395 4 363 9.3E-112 T 12-10-2018 ABD1_19250 918dc47da33142b4381c2419b29a85a5 674 SUPERFAMILY SSF51971 334 522 3.3E-39 T 12-10-2018 ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 8.2E-26 T 12-10-2018 ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 191 2.1E-32 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 7.4E-27 T 12-10-2018 ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 Gene3D G3DSA:3.40.50.1000 3 188 7.1E-27 T 12-10-2018 IPR023214 HAD superfamily ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 Gene3D G3DSA:1.20.1440.100 15 87 7.1E-27 T 12-10-2018 ABD1_29280 63d804e67cb261bdec9d271f2e18d31f 197 SUPERFAMILY SSF56784 2 187 5.32E-24 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 SUPERFAMILY SSF46785 4 112 1.7E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 Gene3D G3DSA:1.10.10.10 3 90 3.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 Gene3D G3DSA:3.40.190.290 93 296 5.3E-43 T 12-10-2018 ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 Pfam PF03466 LysR substrate binding domain 92 296 3.9E-27 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 SUPERFAMILY SSF53850 90 300 1.61E-32 T 12-10-2018 ABD1_24180 45d581bfc11cafe0a7b97e3881b1ffd9 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_01640 0d48fb11d9b2fdafc7c56448dae28651 306 Pfam PF00892 EamA-like transporter family 10 144 5.2E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_01640 0d48fb11d9b2fdafc7c56448dae28651 306 Pfam PF00892 EamA-like transporter family 159 289 3.6E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_01640 0d48fb11d9b2fdafc7c56448dae28651 306 SUPERFAMILY SSF103481 44 147 1.31E-13 T 12-10-2018 ABD1_01640 0d48fb11d9b2fdafc7c56448dae28651 306 SUPERFAMILY SSF103481 197 290 3.01E-11 T 12-10-2018 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 Pfam PF12833 Helix-turn-helix domain 214 288 1.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 Gene3D G3DSA:1.10.10.60 188 292 3.6E-28 T 12-10-2018 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 SMART SM00342 208 291 3.8E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 SUPERFAMILY SSF46689 244 291 9.41E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 2.0E-47 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal ABD1_18150 437b09059b37b0386dfdb679e0f2ea36 294 SUPERFAMILY SSF46689 192 242 6.28E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_30930 5a483ee0d6d3808c87a92693ca56c629 472 Pfam PF00324 Amino acid permease 27 470 1.5E-117 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_30930 5a483ee0d6d3808c87a92693ca56c629 472 PIRSF PIRSF006060 1 472 1.2E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_30930 5a483ee0d6d3808c87a92693ca56c629 472 Gene3D G3DSA:1.20.1740.10 19 472 3.8E-62 T 12-10-2018 ABD1_30930 5a483ee0d6d3808c87a92693ca56c629 472 ProSitePatterns PS00218 Amino acid permeases signature. 52 83 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_06780 70d7640a8cd0caf0b89b63f3787ae103 461 SUPERFAMILY SSF56935 24 461 5.01E-40 T 12-10-2018 ABD1_06780 70d7640a8cd0caf0b89b63f3787ae103 461 Gene3D G3DSA:2.40.160.60 34 461 5.3E-20 T 12-10-2018 ABD1_23000 1714393413ac9eb3e8c4d57f37bd45c3 229 SUPERFAMILY SSF161098 8 206 5.23E-42 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_23000 1714393413ac9eb3e8c4d57f37bd45c3 229 Gene3D G3DSA:1.10.3720.10 2 223 7.6E-52 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_23000 1714393413ac9eb3e8c4d57f37bd45c3 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 2.6E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_23000 1714393413ac9eb3e8c4d57f37bd45c3 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 6.1E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_32850 d701bcd4ef2763ae183e4adbe726c3e7 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.9E-56 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABD1_32850 d701bcd4ef2763ae183e4adbe726c3e7 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.422 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABD1_32850 d701bcd4ef2763ae183e4adbe726c3e7 147 Gene3D G3DSA:3.50.80.10 1 145 1.1E-54 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ABD1_32850 d701bcd4ef2763ae183e4adbe726c3e7 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.1E-50 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABD1_32850 d701bcd4ef2763ae183e4adbe726c3e7 147 SUPERFAMILY SSF69500 1 144 1.57E-54 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ABD1_09300 4dc83259ff6cbf5f3ead0e2f17f2e056 335 Pfam PF03781 Sulfatase-modifying factor enzyme 1 63 331 6.0E-63 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ABD1_09300 4dc83259ff6cbf5f3ead0e2f17f2e056 335 Gene3D G3DSA:3.90.1580.10 60 334 1.9E-76 T 12-10-2018 ABD1_09300 4dc83259ff6cbf5f3ead0e2f17f2e056 335 SUPERFAMILY SSF56436 63 331 1.04E-67 T 12-10-2018 IPR016187 C-type lectin fold ABD1_26270 92067ee79d820501a185d9e17544724a 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 2.2E-38 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 SUPERFAMILY SSF51735 127 278 1.71E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_26270 92067ee79d820501a185d9e17544724a 282 Gene3D G3DSA:3.40.50.10860 7 275 4.6E-102 T 12-10-2018 ABD1_26270 92067ee79d820501a185d9e17544724a 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 2.5E-61 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 35.153 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 SUPERFAMILY SSF53223 2 121 7.29E-38 T 12-10-2018 ABD1_26270 92067ee79d820501a185d9e17544724a 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.6E-62 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABD1_26270 92067ee79d820501a185d9e17544724a 282 Gene3D G3DSA:3.40.50.720 5 257 4.6E-102 T 12-10-2018 ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 SUPERFAMILY SSF53850 87 298 1.34E-25 T 12-10-2018 ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 SUPERFAMILY SSF46785 1 107 2.77E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 Gene3D G3DSA:3.40.190.290 91 299 1.0E-24 T 12-10-2018 ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 Pfam PF03466 LysR substrate binding domain 85 289 1.7E-21 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_06770 8799f840c5e75e696a7a3a02e0e520a4 309 Gene3D G3DSA:1.10.10.10 1 90 8.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13720 cd19e291bf71821ddc9d566dd7c14e25 533 SUPERFAMILY SSF52096 22 270 9.79E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_13720 cd19e291bf71821ddc9d566dd7c14e25 533 SUPERFAMILY SSF52096 237 515 4.21E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_13720 cd19e291bf71821ddc9d566dd7c14e25 533 Gene3D G3DSA:3.90.226.10 1 271 3.2E-98 T 12-10-2018 ABD1_13720 cd19e291bf71821ddc9d566dd7c14e25 533 Pfam PF01039 Carboxyl transferase domain 48 524 4.1E-153 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABD1_13720 cd19e291bf71821ddc9d566dd7c14e25 533 Gene3D G3DSA:3.90.226.10 272 533 4.5E-103 T 12-10-2018 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SUPERFAMILY SSF52540 6 412 1.82E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SMART SM00957 6 399 7.1E-296 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Gene3D G3DSA:3.40.50.300 22 412 5.2E-171 T 12-10-2018 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SUPERFAMILY SSF81886 618 896 5.23E-78 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Gene3D G3DSA:1.10.3060.10 619 830 7.3E-72 T 12-10-2018 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.645 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 336 358 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 410 423 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 373 390 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 63 87 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 170 190 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 117 127 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 PRINTS PR00906 SecA protein signature 101 115 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Gene3D G3DSA:3.40.50.300 414 618 1.2E-84 T 12-10-2018 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Pfam PF07517 SecA DEAD-like domain 8 399 1.1E-128 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SUPERFAMILY SSF81767 227 365 9.02E-41 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Pfam PF07516 SecA Wing and Scaffold domain 615 827 9.0E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SUPERFAMILY SSF52540 413 616 8.27E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Gene3D G3DSA:3.90.1440.10 229 365 5.2E-171 T 12-10-2018 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 ProSitePatterns PS01312 SecA family signature. 498 513 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Pfam PF02810 SEC-C motif 888 906 6.5E-10 T 12-10-2018 IPR004027 SEC-C motif ABD1_28060 73d271f3adc04e02533914b1281d1559 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 SMART SM00958 228 355 1.9E-73 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABD1_28060 73d271f3adc04e02533914b1281d1559 907 Pfam PF01043 SecA preprotein cross-linking domain 232 355 5.0E-37 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABD1_07770 69b7c0127c2254758973a2ddc8d09a18 256 SUPERFAMILY SSF53613 2 240 2.78E-59 T 12-10-2018 IPR029056 Ribokinase-like ABD1_07770 69b7c0127c2254758973a2ddc8d09a18 256 Gene3D G3DSA:3.40.1190.20 1 237 1.5E-77 T 12-10-2018 IPR029056 Ribokinase-like ABD1_07770 69b7c0127c2254758973a2ddc8d09a18 256 Pfam PF08543 Phosphomethylpyrimidine kinase 12 241 6.4E-67 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 Gene3D G3DSA:1.10.287.110 1 74 7.2E-18 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 SUPERFAMILY SSF46565 1 68 3.53E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 17.334 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 153 3.5E-14 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 6.0E-27 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 SMART SM00271 1 61 3.4E-8 T 12-10-2018 IPR001623 DnaJ domain ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 Pfam PF00226 DnaJ domain 5 65 1.9E-8 T 12-10-2018 IPR001623 DnaJ domain ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 Gene3D G3DSA:1.20.1280.20 75 161 3.7E-19 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 ABD1_16160 5a3aa474680b53ecce2a1a29554c37f7 172 SUPERFAMILY SSF47144 75 161 1.7E-18 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 Pfam PF01478 Type IV leader peptidase family 138 247 5.8E-23 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 128 1.2E-32 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 2.6E-25 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 2.6E-25 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 2.6E-25 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ABD1_03030 2ade6f51a00f71fa8f26ddbcc0ca6227 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 2.6E-25 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ABD1_14190 fb348c31f5a21236971161ea3423041c 211 PIRSF PIRSF010372 1 211 5.9E-83 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type ABD1_14190 fb348c31f5a21236971161ea3423041c 211 Pfam PF04299 Putative FMN-binding domain 1 168 4.8E-64 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type ABD1_14190 fb348c31f5a21236971161ea3423041c 211 Gene3D G3DSA:2.30.110.10 1 207 6.4E-66 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_14190 fb348c31f5a21236971161ea3423041c 211 SUPERFAMILY SSF50475 12 197 7.2E-41 T 12-10-2018 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 SUPERFAMILY SSF55816 378 579 2.62E-45 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 Pfam PF00149 Calcineurin-like phosphoesterase 27 283 3.0E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 SUPERFAMILY SSF56300 22 373 3.8E-68 T 12-10-2018 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 Gene3D G3DSA:3.60.21.10 15 378 1.9E-68 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 379 541 1.0E-37 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 Gene3D G3DSA:3.90.780.10 382 574 1.1E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 440 463 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 514 533 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 266 289 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 24 42 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 231 248 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_17490 e2fbd536c9c5c59e0135bfbb71c78a37 580 PRINTS PR01607 Apyrase family signature 298 318 7.4E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 SUPERFAMILY SSF49785 174 333 3.68E-55 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 SUPERFAMILY SSF49785 17 172 1.02E-58 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 TIGRFAM TIGR02961 allantoicase: allantoicase 19 332 3.2E-143 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 Gene3D G3DSA:2.60.120.260 173 335 1.1E-56 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 Gene3D G3DSA:2.60.120.260 9 172 6.7E-60 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 Pfam PF03561 Allantoicase repeat 191 331 3.1E-47 T 12-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 Pfam PF03561 Allantoicase repeat 27 170 2.2E-48 T 12-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 Hamap MF_00813 Probable allantoicase [alc]. 1 334 46.846 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 ABD1_32530 1c21c51635e99b59e8c43c1233bac41d 336 PIRSF PIRSF016516 2 335 3.8E-148 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 326 747 9.8E-129 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 ProSitePatterns PS00885 EPSP synthase signature 2. 655 673 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 SUPERFAMILY SSF55205 317 749 4.09E-131 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 322 751 32.934 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 SUPERFAMILY SSF48179 189 296 3.17E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 ProSitePatterns PS00104 EPSP synthase signature 1. 401 415 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Gene3D G3DSA:3.40.50.720 14 191 1.3E-52 T 12-10-2018 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Gene3D G3DSA:3.65.10.10 334 544 3.1E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 321 743 3.9E-118 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Gene3D G3DSA:1.10.3660.10 192 296 5.3E-35 T 12-10-2018 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Gene3D G3DSA:3.65.10.10 326 742 3.1E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 Pfam PF02153 Prephenate dehydrogenase 30 286 1.0E-70 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ABD1_22740 56b8499e146f45392eb36ecbd1d408eb 756 SUPERFAMILY SSF51735 16 184 2.84E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09550 7ee8942790383378bde109336464074b 537 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 1.9E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 Pfam PF00009 Elongation factor Tu GTP binding domain 24 213 7.9E-45 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 Gene3D G3DSA:2.40.30.10 241 327 2.5E-28 T 12-10-2018 ABD1_09550 7ee8942790383378bde109336464074b 537 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 433 5.7E-197 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABD1_09550 7ee8942790383378bde109336464074b 537 Gene3D G3DSA:2.40.30.10 330 434 4.3E-35 T 12-10-2018 ABD1_09550 7ee8942790383378bde109336464074b 537 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 474 52.284 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABD1_09550 7ee8942790383378bde109336464074b 537 SUPERFAMILY SSF52540 16 236 7.3E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09550 7ee8942790383378bde109336464074b 537 SUPERFAMILY SSF50447 242 328 8.25E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_09550 7ee8942790383378bde109336464074b 537 Gene3D G3DSA:3.40.50.300 1 239 2.1E-76 T 12-10-2018 ABD1_09550 7ee8942790383378bde109336464074b 537 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_09550 7ee8942790383378bde109336464074b 537 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_09550 7ee8942790383378bde109336464074b 537 SUPERFAMILY SSF50465 333 433 2.45E-32 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABD1_28760 b00184eaf3f6c34acf569584575fef6b 153 Pfam PF13689 Domain of unknown function (DUF4154) 20 150 1.6E-23 T 12-10-2018 IPR025293 YfiR-like ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 Gene3D G3DSA:3.40.640.10 71 338 4.7E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 1.1E-257 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 SUPERFAMILY SSF53383 24 448 8.3E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 Gene3D G3DSA:3.90.1150.10 23 441 4.7E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_24410 38a3337aad10b3a8dfe55623813f99a6 457 Pfam PF00202 Aminotransferase class-III 34 447 2.1E-96 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_17910 92062d68f3f539fc251a31d947c20a93 515 Gene3D G3DSA:1.20.1720.10 19 199 2.0E-33 T 12-10-2018 ABD1_17910 92062d68f3f539fc251a31d947c20a93 515 Pfam PF07690 Major Facilitator Superfamily 20 417 2.0E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_17910 92062d68f3f539fc251a31d947c20a93 515 SUPERFAMILY SSF103473 7 510 2.49E-59 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_17910 92062d68f3f539fc251a31d947c20a93 515 Gene3D G3DSA:1.20.1250.20 267 513 5.3E-16 T 12-10-2018 ABD1_17910 92062d68f3f539fc251a31d947c20a93 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 506 1.5E-112 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 SMART SM00052 429 674 1.0E-105 T 12-10-2018 IPR001633 EAL domain ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 Gene3D G3DSA:3.30.70.270 252 431 3.0E-52 T 12-10-2018 ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 Pfam PF00563 EAL domain 435 669 6.2E-70 T 12-10-2018 IPR001633 EAL domain ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 417 5.0E-38 T 12-10-2018 IPR000160 GGDEF domain ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 414 5.3E-42 T 12-10-2018 IPR000160 GGDEF domain ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 SUPERFAMILY SSF141868 435 677 1.96E-85 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 SMART SM00267 247 418 1.5E-51 T 12-10-2018 IPR000160 GGDEF domain ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 SUPERFAMILY SSF55073 263 419 5.65E-47 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_05150 c2452993b515243b2f9e5987a64c0a75 684 Gene3D G3DSA:3.20.20.450 432 680 3.0E-92 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 SUPERFAMILY SSF55031 181 289 1.64E-31 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 53.056 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 375 9.3E-172 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.2E-42 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.5E-25 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 SUPERFAMILY SSF53187 3 376 1.89E-62 T 12-10-2018 ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 Gene3D G3DSA:3.40.630.10 12 364 1.3E-130 T 12-10-2018 ABD1_27530 9e1f231c7d099a48f0009a78d9f8046a 377 Gene3D G3DSA:3.30.70.360 181 294 1.3E-130 T 12-10-2018 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 8 266 2.3E-113 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 267 38.446 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 100 2.2E-44 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 Gene3D G3DSA:3.90.226.10 1 267 2.8E-93 T 12-10-2018 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 105 118 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 102 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 40 51 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 158 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 65 83 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 134 2.0E-39 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_06140 f176344fd7fa5cf70b22fe7295916850 273 SUPERFAMILY SSF52096 8 265 4.55E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 137 1.1E-24 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 SMART SM00829 15 336 4.2E-8 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 Gene3D G3DSA:3.40.50.720 154 308 6.6E-112 T 12-10-2018 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 SUPERFAMILY SSF50129 8 164 3.2E-42 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 Gene3D G3DSA:3.90.180.10 15 336 6.6E-112 T 12-10-2018 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 SUPERFAMILY SSF51735 143 306 1.18E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 Pfam PF00107 Zinc-binding dehydrogenase 180 302 3.3E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_33390 cc298d0c1c7c7c8fd438eff09f9d850a 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABD1_25730 e7e0789216935441a49157bc838447d6 356 Pfam PF12698 ABC-2 family transporter protein 1 343 1.1E-27 T 12-10-2018 ABD1_25730 e7e0789216935441a49157bc838447d6 356 Gene3D G3DSA:3.40.1710.10 20 135 7.0E-6 T 12-10-2018 ABD1_10930 fa82c212d9ee6a5c6be35a72e7f493f7 225 Gene3D G3DSA:3.40.50.10610 27 189 1.2E-61 T 12-10-2018 ABD1_10930 fa82c212d9ee6a5c6be35a72e7f493f7 225 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 13 214 4.6E-74 T 12-10-2018 IPR008517 Protein of unknown function DUF799 ABD1_13130 c109a9998c582118f54565b6fdc5c29c 293 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_13130 c109a9998c582118f54565b6fdc5c29c 293 SMART SM00382 50 229 1.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_13130 c109a9998c582118f54565b6fdc5c29c 293 Pfam PF00005 ABC transporter 41 180 6.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_13130 c109a9998c582118f54565b6fdc5c29c 293 SUPERFAMILY SSF52540 22 250 5.47E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_13130 c109a9998c582118f54565b6fdc5c29c 293 Gene3D G3DSA:3.40.50.300 19 282 1.4E-65 T 12-10-2018 ABD1_23250 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 1.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 SUPERFAMILY SSF55920 10 268 7.98E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like ABD1_23250 60304b25248c85461679115ad37b5b95 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 Pfam PF00557 Metallopeptidase family M24 19 256 5.0E-49 T 12-10-2018 IPR000994 Peptidase M24 ABD1_23250 60304b25248c85461679115ad37b5b95 275 Gene3D G3DSA:3.90.230.10 10 274 8.7E-103 T 12-10-2018 ABD1_23250 60304b25248c85461679115ad37b5b95 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 8.5E-95 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_23250 60304b25248c85461679115ad37b5b95 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 40.527 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABD1_30090 fdca121fef29dcd7bd799d9e24ddc982 300 SUPERFAMILY SSF103481 49 150 1.57E-17 T 12-10-2018 ABD1_30090 fdca121fef29dcd7bd799d9e24ddc982 300 SUPERFAMILY SSF103481 195 297 5.1E-15 T 12-10-2018 ABD1_30090 fdca121fef29dcd7bd799d9e24ddc982 300 Pfam PF00892 EamA-like transporter family 17 147 1.4E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_30090 fdca121fef29dcd7bd799d9e24ddc982 300 Pfam PF00892 EamA-like transporter family 161 292 1.6E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Gene3D G3DSA:2.40.10.120 26 250 2.4E-75 T 12-10-2018 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 SMART SM00228 368 448 1.8E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 SMART SM00228 257 339 1.9E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 189 206 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 115 135 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 155 179 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 PRINTS PR00834 HtrA/DegQ protease family signature 94 106 9.7E-48 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Gene3D G3DSA:2.30.42.10 365 458 5.2E-13 T 12-10-2018 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Gene3D G3DSA:2.30.42.10 252 355 8.2E-30 T 12-10-2018 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 27 452 1.5E-137 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 SUPERFAMILY SSF50156 367 455 3.29E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 SUPERFAMILY SSF50494 1 266 1.35E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Pfam PF13180 PDZ domain 258 348 1.1E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Pfam PF13180 PDZ domain 368 451 4.1E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 Pfam PF13365 Trypsin-like peptidase domain 85 218 3.2E-34 T 12-10-2018 ABD1_25120 9f4e2caae2221292de2ea52c9865193f 458 SUPERFAMILY SSF50156 238 347 4.85E-23 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 PIRSF PIRSF000429 1 401 9.3E-115 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 SUPERFAMILY SSF53901 279 400 3.93E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 Gene3D G3DSA:3.40.47.10 125 396 3.9E-146 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 SUPERFAMILY SSF53901 3 278 4.97E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 9.4E-135 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 Pfam PF02803 Thiolase, C-terminal domain 278 400 1.8E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 Pfam PF00108 Thiolase, N-terminal domain 5 228 6.6E-47 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_27970 6764c125b2bf2f0f87d0ffc58890d099 401 Gene3D G3DSA:3.40.47.10 6 298 3.9E-146 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 SMART SM00450 126 227 5.2E-23 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 43.132 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 Pfam PF00581 Rhodanese-like domain 128 223 3.8E-12 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 Gene3D G3DSA:3.30.70.100 9 110 1.2E-28 T 12-10-2018 ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 Gene3D G3DSA:3.40.250.10 114 260 1.9E-50 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_26600 fea3d2980b2a748d1fc93a25be5c29ae 310 SUPERFAMILY SSF52821 122 252 2.06E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 Gene3D G3DSA:2.70.98.90 81 373 3.0E-100 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 508 523 8.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 527 551 8.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 379 395 8.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 Pfam PF02096 60Kd inner membrane protein 394 572 1.4E-60 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 393 572 7.7E-71 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 Pfam PF14849 YidC periplasmic domain 85 381 5.4E-70 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 392 6.2E-104 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 249 267 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 455 478 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 502 524 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 364 384 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 538 561 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 3 24 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 90 111 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 282 297 3.6E-68 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABD1_33960 82007c6d68d960f029dfa4f67ba6a2f3 586 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 574 23.236 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 ProSitePatterns PS00683 Rhodanese C-terminal signature. 257 267 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 SUPERFAMILY SSF52821 148 280 5.63E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 SUPERFAMILY SSF52821 6 132 6.16E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 Pfam PF00581 Rhodanese-like domain 157 268 4.0E-17 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 Pfam PF00581 Rhodanese-like domain 14 122 6.6E-13 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 Gene3D G3DSA:3.40.250.10 150 276 5.1E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 Gene3D G3DSA:3.40.250.10 6 140 2.4E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 SMART SM00450 154 273 2.9E-20 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_32810 a9bb3d4345b87728e65cf79892c3817b 282 SMART SM00450 12 127 1.4E-12 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 SUPERFAMILY SSF54686 1 134 3.66E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 Gene3D G3DSA:3.90.1170.10 1 137 3.8E-55 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.3E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.874 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 7.8E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 7.8E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 7.8E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 7.8E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29590 29b4739ed3e5a65db03daab99dec320f 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.4E-57 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 Gene3D G3DSA:1.10.10.60 199 304 4.4E-21 T 12-10-2018 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 SMART SM00342 217 301 3.4E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 SUPERFAMILY SSF46689 257 303 1.16E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 5.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 5.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_31470 00d53dca952ceb54cb78f7960a07ed90 306 Pfam PF12833 Helix-turn-helix domain 228 302 4.7E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 269 1.3E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 SUPERFAMILY SSF54593 30 335 3.1E-75 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 Gene3D G3DSA:3.10.180.10 148 349 3.9E-68 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 348 6.6E-115 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 PIRSF PIRSF009283 2 349 2.4E-108 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 Gene3D G3DSA:3.10.180.10 1 147 1.9E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_33190 f93cdbdc6b8151abeb0e8def244b302d 351 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 134 5.6E-48 T 12-10-2018 ABD1_32370 4f0161fd40db76215d90b34ef18e7ec8 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 8.8E-58 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_32370 4f0161fd40db76215d90b34ef18e7ec8 216 SUPERFAMILY SSF53271 10 199 6.03E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_32370 4f0161fd40db76215d90b34ef18e7ec8 216 Gene3D G3DSA:3.40.50.2020 6 216 4.3E-77 T 12-10-2018 ABD1_32370 4f0161fd40db76215d90b34ef18e7ec8 216 Pfam PF00156 Phosphoribosyl transferase domain 47 163 1.3E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABD1_32370 4f0161fd40db76215d90b34ef18e7ec8 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 33.431 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15730 23e7d335f9ab08cabd0c08f5c7619b5e 201 Pfam PF11612 Type II secretion system (T2SS), protein J 51 180 3.2E-17 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 ABD1_15730 23e7d335f9ab08cabd0c08f5c7619b5e 201 Gene3D G3DSA:3.10.610.10 28 133 3.1E-7 T 12-10-2018 ABD1_15730 23e7d335f9ab08cabd0c08f5c7619b5e 201 SUPERFAMILY SSF54523 30 190 5.1E-24 T 12-10-2018 ABD1_15730 23e7d335f9ab08cabd0c08f5c7619b5e 201 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 1 176 7.9E-19 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 Pfam PF00005 ABC transporter 21 169 3.2E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 SMART SM00382 30 227 1.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 SUPERFAMILY SSF55021 250 334 1.04E-21 T 12-10-2018 ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 Gene3D G3DSA:3.30.70.260 233 338 1.3E-29 T 12-10-2018 ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 SUPERFAMILY SSF52540 1 240 1.77E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 Gene3D G3DSA:3.40.50.300 1 232 5.7E-75 T 12-10-2018 ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 Pfam PF09383 NIL domain 266 334 4.0E-20 T 12-10-2018 IPR018449 NIL domain ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 SMART SM00930 262 337 9.9E-21 T 12-10-2018 IPR018449 NIL domain ABD1_21880 4059d2a2a15fa26a4be3b1a66761ca8a 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 SUPERFAMILY SSF53732 2 471 3.53E-167 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 4.5E-235 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 88 101 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 349 360 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 139 154 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 201 214 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 215 228 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 114 122 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 292 306 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 406 419 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 PRINTS PR00415 Aconitase family signature 125 138 2.6E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 Gene3D G3DSA:3.30.499.10 333 472 4.5E-50 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 8.3E-162 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 59.363 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABD1_03870 f0495676a49e7f4c2b60cc8d4bae733d 472 Gene3D G3DSA:3.30.499.20 5 292 1.7E-96 T 12-10-2018 ABD1_24470 8b7f9b085d3e92eef39af31ce5b7e55e 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 85 1.7E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_24470 8b7f9b085d3e92eef39af31ce5b7e55e 231 Gene3D G3DSA:1.10.10.60 23 77 9.2E-17 T 12-10-2018 ABD1_24470 8b7f9b085d3e92eef39af31ce5b7e55e 231 Gene3D G3DSA:1.10.357.10 78 230 6.8E-27 T 12-10-2018 ABD1_24470 8b7f9b085d3e92eef39af31ce5b7e55e 231 SUPERFAMILY SSF46689 27 101 7.18E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_22910 01219398b542a7073603c8ca3f0662e2 231 SUPERFAMILY SSF118196 2 222 2.09E-67 T 12-10-2018 IPR036413 YaeB-like superfamily ABD1_22910 01219398b542a7073603c8ca3f0662e2 231 Gene3D G3DSA:2.40.30.70 1 133 3.9E-43 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily ABD1_22910 01219398b542a7073603c8ca3f0662e2 231 Pfam PF01980 Uncharacterised protein family UPF0066 9 135 2.2E-40 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain ABD1_22910 01219398b542a7073603c8ca3f0662e2 231 Gene3D G3DSA:3.30.2310.10 134 223 4.5E-14 T 12-10-2018 ABD1_22910 01219398b542a7073603c8ca3f0662e2 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 141 8.6E-38 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain ABD1_10680 ec94209b316e593a3868cc23056324d3 133 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 19.798 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 ABD1_10680 ec94209b316e593a3868cc23056324d3 133 SUPERFAMILY SSF52980 6 105 3.43E-20 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_10680 ec94209b316e593a3868cc23056324d3 133 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 111 9.6E-28 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 ABD1_10680 ec94209b316e593a3868cc23056324d3 133 Pfam PF02021 Uncharacterised protein family UPF0102 11 101 3.7E-24 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 ABD1_10680 ec94209b316e593a3868cc23056324d3 133 Gene3D G3DSA:3.40.1350.10 10 131 7.6E-30 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ABD1_33090 c0e7cd1dfe44ab6f117083b5d6f6db6b 191 Pfam PF05962 HutD 8 168 1.8E-46 T 12-10-2018 IPR010282 Uncharacterised protein family HutD/Ves ABD1_33090 c0e7cd1dfe44ab6f117083b5d6f6db6b 191 SUPERFAMILY SSF51182 1 188 2.67E-55 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_33090 c0e7cd1dfe44ab6f117083b5d6f6db6b 191 Gene3D G3DSA:2.60.120.10 11 111 1.8E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_33090 c0e7cd1dfe44ab6f117083b5d6f6db6b 191 Gene3D G3DSA:2.60.120.10 6 177 1.8E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 897 16.87 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Pfam PF11987 Translation-initiation factor 2 684 789 5.5E-35 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.40.50.300 397 570 6.1E-72 T 12-10-2018 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Pfam PF00009 Elongation factor Tu GTP binding domain 404 559 6.8E-35 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF50447 572 655 2.37E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 558 7.1E-33 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.30.56.50 2 51 1.1E-6 T 12-10-2018 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:2.40.30.10 801 898 2.8E-29 T 12-10-2018 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF52156 677 806 2.09E-34 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 98 5.6E-11 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF50447 801 897 1.43E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 899 1.4E-249 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF52540 394 566 1.84E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 372 1.9E-13 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:2.40.30.10 571 688 7.1E-40 T 12-10-2018 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 ProSitePatterns PS01176 Initiation factor 2 signature. 850 872 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF46955 3 51 2.75E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_03100 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.40.50.10050 693 800 1.0E-35 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 11 186 4.6E-59 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PIRSF PIRSF500210 1 323 1.2E-121 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 323 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 5.3E-66 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 Gene3D G3DSA:3.30.540.10 2 187 8.4E-66 T 12-10-2018 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 PIRSF PIRSF000904 1 323 5.0E-120 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 SUPERFAMILY SSF56655 5 323 2.96E-109 T 12-10-2018 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 Gene3D G3DSA:3.40.190.80 188 323 8.0E-51 T 12-10-2018 ABD1_25490 577dc7924fad42ec11ab1836c54bc22a 323 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 323 44.474 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABD1_32390 8e16294a1902fc28d28b3178819f9f4e 116 SUPERFAMILY SSF52833 1 113 3.53E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_32390 8e16294a1902fc28d28b3178819f9f4e 116 Gene3D G3DSA:3.40.30.10 1 115 8.5E-40 T 12-10-2018 ABD1_32390 8e16294a1902fc28d28b3178819f9f4e 116 Pfam PF03960 ArsC family 5 112 7.9E-16 T 12-10-2018 IPR006660 Arsenate reductase-like ABD1_32390 8e16294a1902fc28d28b3178819f9f4e 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.2E-27 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 SUPERFAMILY SSF55874 235 402 7.07E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 SUPERFAMILY SSF47384 161 246 2.16E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 2.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 402 1.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 Gene3D G3DSA:3.30.565.10 252 410 1.1E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 SMART SM00387 290 404 2.4E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 Gene3D G3DSA:1.10.287.130 149 243 2.4E-12 T 12-10-2018 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 SMART SM00388 177 245 1.3E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_28500 3a567fe9b5494bdca6c5a92b47e5f7e7 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 245 2.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 Gene3D G3DSA:3.40.50.720 1 244 1.9E-70 T 12-10-2018 ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 SUPERFAMILY SSF51735 6 244 5.34E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 8.7E-61 T 12-10-2018 ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_14110 f754fa129841325fba99257eb6b9bbe5 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0046 T 12-10-2018 ABD1_32590 2d6708ae50eb302a16e659ec267c1595 447 Pfam PF07819 PGAP1-like protein 152 374 1.8E-33 T 12-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 ABD1_32590 2d6708ae50eb302a16e659ec267c1595 447 SUPERFAMILY SSF53474 155 372 1.8E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32590 2d6708ae50eb302a16e659ec267c1595 447 Gene3D G3DSA:3.40.50.1820 157 415 2.0E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_10020 960365bba91a1807bf8765dee27a78af 218 Gene3D G3DSA:1.10.260.40 1 67 5.3E-21 T 12-10-2018 ABD1_10020 960365bba91a1807bf8765dee27a78af 218 Pfam PF00717 Peptidase S24-like 122 188 3.1E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_10020 960365bba91a1807bf8765dee27a78af 218 SUPERFAMILY SSF47413 2 62 6.97E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_10020 960365bba91a1807bf8765dee27a78af 218 SMART SM00530 7 61 1.1E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_10020 960365bba91a1807bf8765dee27a78af 218 Pfam PF01381 Helix-turn-helix 8 61 1.4E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_10020 960365bba91a1807bf8765dee27a78af 218 Gene3D G3DSA:2.10.109.10 77 204 2.1E-31 T 12-10-2018 ABD1_10020 960365bba91a1807bf8765dee27a78af 218 SUPERFAMILY SSF51306 82 205 3.66E-21 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_13400 3d573ec843546a5410c9a5cc0300ef1e 429 Pfam PF00083 Sugar (and other) transporter 12 425 1.5E-29 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_13400 3d573ec843546a5410c9a5cc0300ef1e 429 SUPERFAMILY SSF103473 5 425 7.98E-65 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_13400 3d573ec843546a5410c9a5cc0300ef1e 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_13400 3d573ec843546a5410c9a5cc0300ef1e 429 Gene3D G3DSA:1.20.1250.20 6 429 1.7E-74 T 12-10-2018 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 SUPERFAMILY SSF51735 164 349 2.1E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 Gene3D G3DSA:3.40.50.720 178 338 5.7E-129 T 12-10-2018 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 SUPERFAMILY SSF50129 1 186 9.13E-60 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 Gene3D G3DSA:3.90.180.10 9 374 5.7E-129 T 12-10-2018 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 SMART SM00829 8 385 0.0019 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 150 7.5E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_13020 da8bf9d9f1277748b035ddea3932baab 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.9E-10 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated ABD1_19560 bfebf32cbbfa2b25e8c88abdebe3c027 124 Pfam PF11042 Protein of unknown function (DUF2750) 19 111 2.2E-16 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 ABD1_14850 31de0c57692a6c84c1ee6cf2630df276 276 Pfam PF03180 NLPA lipoprotein 37 265 8.1E-73 T 12-10-2018 IPR004872 Lipoprotein NlpA family ABD1_14850 31de0c57692a6c84c1ee6cf2630df276 276 SUPERFAMILY SSF53850 37 273 1.28E-67 T 12-10-2018 ABD1_14850 31de0c57692a6c84c1ee6cf2630df276 276 Gene3D G3DSA:3.40.190.10 44 264 7.7E-72 T 12-10-2018 ABD1_14850 31de0c57692a6c84c1ee6cf2630df276 276 Gene3D G3DSA:3.40.190.10 117 222 7.7E-72 T 12-10-2018 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.6E-145 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 Gene3D G3DSA:3.90.1510.10 42 276 1.0E-138 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 SUPERFAMILY SSF110738 1 375 3.92E-132 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 Pfam PF02595 Glycerate kinase family 3 374 1.1E-142 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 PIRSF PIRSF006078 1 378 6.4E-135 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABD1_25950 4ad4cb924460d301d3e519e5b22a64dd 385 Gene3D G3DSA:3.40.50.10350 1 362 1.0E-138 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF54292 3 89 9.18E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:3.10.20.30 2 100 3.3E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:3.40.50.80 202 335 1.3E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF52343 206 336 1.57E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 5.6E-16 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF63380 107 204 2.72E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00970 Oxidoreductase FAD-binding domain 109 204 1.1E-23 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:2.40.30.10 101 201 8.8E-26 T 12-10-2018 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 2.3E-23 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_17390 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 1.7E-20 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 99 193 2.2E-12 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 SUPERFAMILY SSF46689 3 78 1.95E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 Gene3D G3DSA:1.10.357.10 1 200 6.2E-71 T 12-10-2018 ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 SUPERFAMILY SSF48498 82 196 6.4E-24 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_31890 1542b626cd3c0471c9ac63e47d74bd4c 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 2.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Pfam PF07244 Surface antigen variable number repeat 271 348 1.5E-11 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Pfam PF07244 Surface antigen variable number repeat 180 267 9.0E-13 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Pfam PF07244 Surface antigen variable number repeat 97 176 2.6E-11 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Pfam PF07244 Surface antigen variable number repeat 351 425 2.6E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:3.10.20.310 271 347 2.7E-14 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:3.10.20.310 96 177 1.8E-16 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:3.10.20.310 179 270 2.0E-19 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:2.40.160.50 431 836 6.9E-110 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 836 1.4E-237 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:3.10.20.310 348 425 9.8E-24 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Gene3D G3DSA:3.10.20.310 22 95 3.6E-17 T 12-10-2018 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Pfam PF01103 Surface antigen 452 836 2.7E-74 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 PIRSF PIRSF006076 1 836 1.8E-243 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ABD1_19950 a58326d89047c2f5858d4a34ae22cecc 836 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 836 23.662 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF55021 333 409 2.24E-19 T 12-10-2018 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF51735 109 296 2.23E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF52283 9 135 1.02E-49 T 12-10-2018 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.30.70.260 329 409 1.5E-30 T 12-10-2018 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.40.50.720 110 298 1.0E-107 T 12-10-2018 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 7.9E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 3.3E-36 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABD1_30380 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.40.50.720 15 313 1.0E-107 T 12-10-2018 ABD1_23680 c7581fff418b58227a8f54b2172eeab3 389 SUPERFAMILY SSF56322 46 384 3.4E-89 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_23680 c7581fff418b58227a8f54b2172eeab3 389 Pfam PF00425 chorismate binding enzyme 120 375 3.6E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABD1_23680 c7581fff418b58227a8f54b2172eeab3 389 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 96 383 1.7E-88 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 ABD1_23680 c7581fff418b58227a8f54b2172eeab3 389 Gene3D G3DSA:3.60.120.10 4 385 5.7E-111 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 3.2E-113 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 Pfam PF00701 Dihydrodipicolinate synthetase family 9 293 4.3E-104 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 SMART SM01130 7 295 4.7E-145 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 PIRSF PIRSF001365 3 297 3.8E-99 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 65.772 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.8E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.8E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.8E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.8E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 SUPERFAMILY SSF51569 8 295 1.67E-107 T 12-10-2018 ABD1_33240 ff1e88d15ff4a3b0efba2e185b703141 297 Gene3D G3DSA:3.20.20.70 7 297 4.6E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.3E-21 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Gene3D G3DSA:3.10.50.30 77 159 7.7E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 25.864 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 SUPERFAMILY SSF54534 80 156 2.75E-18 T 12-10-2018 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 158 3.9E-72 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Gene3D G3DSA:1.10.287.180 1 76 5.0E-29 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.2E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 PIRSF PIRSF006092 1 158 1.4E-42 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 SUPERFAMILY SSF46557 3 78 2.09E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABD1_26060 10a9c62cd5383e8c589f7b8ab3dce432 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.791 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ABD1_08460 ac3f1335327df78c33cbe499e7ada0c7 422 SUPERFAMILY SSF56300 9 355 8.26E-52 T 12-10-2018 ABD1_08460 ac3f1335327df78c33cbe499e7ada0c7 422 Pfam PF00149 Calcineurin-like phosphoesterase 8 238 4.5E-16 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_08460 ac3f1335327df78c33cbe499e7ada0c7 422 Gene3D G3DSA:3.60.21.10 2 289 3.5E-75 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_08460 ac3f1335327df78c33cbe499e7ada0c7 422 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 393 3.3E-9 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ABD1_08460 ac3f1335327df78c33cbe499e7ada0c7 422 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 9 264 3.0E-55 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 SUPERFAMILY SSF52540 5 334 4.2E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 SMART SM00382 122 247 5.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 Pfam PF00437 Type II/IV secretion system protein 12 269 6.0E-47 T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 Gene3D G3DSA:3.30.450.90 1 100 4.7E-37 T 12-10-2018 ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 Gene3D G3DSA:3.40.50.300 101 345 1.0E-106 T 12-10-2018 ABD1_08430 0670b5c243926a10facbbe9db69abfdc 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 9.7E-155 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 Gene3D G3DSA:3.30.1310.10 1 109 5.8E-35 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 PIRSF PIRSF004555 1 109 2.2E-32 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 98 21.709 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 99 3.9E-30 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 105 3.7E-25 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABD1_16750 9040d3164e75d9af4f1f70f51beae072 109 SUPERFAMILY SSF82607 7 103 1.05E-29 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 SUPERFAMILY SSF50249 4 71 4.0E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 27.121 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 Gene3D G3DSA:2.40.50.140 2 71 2.0E-37 T 12-10-2018 ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.4E-28 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 SMART SM00316 5 73 1.9E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_03920 b777b9856e859f458e4de8d9ec99eced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.3E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABD1_16490 8ad80a8aac6c40fbd0c1071316712601 227 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 9 218 1.3E-35 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABD1_16490 8ad80a8aac6c40fbd0c1071316712601 227 Pfam PF02654 Cobalamin-5-phosphate synthase 6 216 4.7E-49 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABD1_16490 8ad80a8aac6c40fbd0c1071316712601 227 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 227 39.093 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Pfam PF00384 Molybdopterin oxidoreductase 567 628 1.5E-8 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SUPERFAMILY SSF53706 219 679 2.3E-83 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.4E-11 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SUPERFAMILY SSF50692 799 878 6.78E-8 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Gene3D G3DSA:3.10.20.740 1 128 1.0E-28 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 645 1.1E-199 T 12-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 6.1E-15 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Gene3D G3DSA:3.40.50.740 508 679 6.2E-16 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SUPERFAMILY SSF54292 1 77 3.28E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SMART SM00929 88 128 1.7E-19 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Gene3D G3DSA:2.20.25.90 221 275 2.9E-13 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.0E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SUPERFAMILY SSF54862 82 213 1.05E-32 T 12-10-2018 ABD1_07090 1b8b673d004aaf02e769567d22c7a466 894 SMART SM00926 221 275 1.2E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_28400 7f3b9a739d55a3454f35aad307b07793 369 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 361 1.6E-110 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABD1_28400 7f3b9a739d55a3454f35aad307b07793 369 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 2 361 9.6E-142 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABD1_28400 7f3b9a739d55a3454f35aad307b07793 369 Gene3D G3DSA:3.40.50.2000 1 189 1.1E-70 T 12-10-2018 ABD1_28400 7f3b9a739d55a3454f35aad307b07793 369 Gene3D G3DSA:3.40.50.2000 191 354 9.1E-63 T 12-10-2018 ABD1_28400 7f3b9a739d55a3454f35aad307b07793 369 SUPERFAMILY SSF53756 1 361 7.53E-124 T 12-10-2018 ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 SMART SM00062 53 275 2.9E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 Gene3D G3DSA:3.40.190.10 48 268 1.7E-76 T 12-10-2018 ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 270 9.0E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 76 89 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 Gene3D G3DSA:3.40.190.10 143 233 1.7E-76 T 12-10-2018 ABD1_14030 e30facde1d94b2b56eeb6e202a7e0d8b 288 SUPERFAMILY SSF53850 12 270 2.33E-58 T 12-10-2018 ABD1_07800 7cf7ed9b4275b16e3b779597fe3734c2 516 Pfam PF09925 Predicted membrane protein (DUF2157) 6 115 5.4E-14 T 12-10-2018 IPR018677 Domain of unknown function DUF2157 ABD1_16710 149a8f02578939de2db7ab13b417028e 255 SUPERFAMILY SSF53335 31 250 1.88E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_16710 149a8f02578939de2db7ab13b417028e 255 Gene3D G3DSA:3.40.50.150 23 247 4.6E-55 T 12-10-2018 ABD1_16710 149a8f02578939de2db7ab13b417028e 255 Pfam PF08241 Methyltransferase domain 47 143 5.6E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 PIRSF PIRSF005902 1 256 1.5E-75 T 12-10-2018 IPR001130 TatD family GO:0016788 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 6.2E-86 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 Gene3D G3DSA:3.20.20.140 1 257 4.6E-88 T 12-10-2018 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 Pfam PF01026 TatD related DNase 3 254 1.4E-74 T 12-10-2018 IPR001130 TatD family GO:0016788 ABD1_15690 9c8000e2f81fb1ce9109f55d01d2bfc4 257 SUPERFAMILY SSF51556 2 255 3.41E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 PIRSF PIRSF000103 1 295 1.7E-77 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 SUPERFAMILY SSF51735 1 161 2.51E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 4.8E-36 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 Gene3D G3DSA:3.40.50.720 1 163 8.1E-61 T 12-10-2018 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 Gene3D G3DSA:1.10.1040.10 164 294 2.5E-47 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 1.4E-120 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 1.3E-52 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABD1_01040 ca5272ff9895ef58a9bf0e99ffcc8987 296 SUPERFAMILY SSF48179 162 291 4.31E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 Gene3D G3DSA:3.50.50.60 107 406 2.6E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 SUPERFAMILY SSF54373 277 369 1.26E-9 T 12-10-2018 ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 Pfam PF01266 FAD dependent oxidoreductase 3 405 1.3E-54 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 Gene3D G3DSA:3.50.50.60 4 51 4.5E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 Gene3D G3DSA:3.30.9.10 133 368 2.6E-34 T 12-10-2018 ABD1_20100 9cdad21c8c60b598bcc0a415e3297d7b 414 SUPERFAMILY SSF51905 1 412 1.42E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 1.3E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 SUPERFAMILY SSF55957 355 441 6.41E-23 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 SUPERFAMILY SSF53738 258 362 7.06E-27 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 6.1E-32 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 SUPERFAMILY SSF53738 156 257 2.24E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 7.4E-41 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.5E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.5E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 4.5E-14 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Gene3D G3DSA:3.40.120.10 175 359 1.8E-65 T 12-10-2018 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Gene3D G3DSA:3.40.120.10 1 154 8.1E-46 T 12-10-2018 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 3.9E-186 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Gene3D G3DSA:3.40.120.10 257 336 1.8E-65 T 12-10-2018 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 SUPERFAMILY SSF53738 2 181 2.35E-47 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 438 1.3E-14 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 46.452 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_32150 b21f446368987df15e793c45e4eb7c69 445 Gene3D G3DSA:3.30.310.50 367 444 5.0E-24 T 12-10-2018 ABD1_30540 c93bb74531cc9a55f4125a8df060b330 333 Pfam PF16074 Type IV Pilus-assembly protein W 181 327 1.1E-11 T 12-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 ABD1_30540 c93bb74531cc9a55f4125a8df060b330 333 SUPERFAMILY SSF54523 13 89 3.61E-5 T 12-10-2018 ABD1_30540 c93bb74531cc9a55f4125a8df060b330 333 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.1E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30540 c93bb74531cc9a55f4125a8df060b330 333 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 1.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30540 c93bb74531cc9a55f4125a8df060b330 333 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_18730 32f1d1abd68548797a438772a78688b2 259 Pfam PF00561 alpha/beta hydrolase fold 22 244 1.6E-27 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18730 32f1d1abd68548797a438772a78688b2 259 SUPERFAMILY SSF53474 5 257 2.13E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18730 32f1d1abd68548797a438772a78688b2 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 257 1.4E-91 T 12-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 ABD1_18730 32f1d1abd68548797a438772a78688b2 259 Gene3D G3DSA:3.40.50.1820 3 258 2.1E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18730 32f1d1abd68548797a438772a78688b2 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.0E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18730 32f1d1abd68548797a438772a78688b2 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 4.0E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18730 32f1d1abd68548797a438772a78688b2 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 4.0E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18730 32f1d1abd68548797a438772a78688b2 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 4.0E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:1.10.486.10 384 553 4.9E-120 T 12-10-2018 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:1.10.10.160 112 188 4.1E-92 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 6 678 3.7E-288 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 SUPERFAMILY SSF52540 5 647 3.58E-156 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:3.40.50.300 8 273 4.1E-92 T 12-10-2018 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 39.54 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:3.40.50.300 281 641 4.9E-120 T 12-10-2018 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 6.5E-71 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABD1_08310 fc7fab4d6fb1f943d23174bd64939aab 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 2.8E-71 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 SUPERFAMILY SSF103263 4 351 3.4E-143 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.3E-135 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 Pfam PF01264 Chorismate synthase 10 345 1.7E-136 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 Gene3D G3DSA:3.60.150.10 1 363 1.1E-161 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.57 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 PIRSF PIRSF001456 3 358 2.3E-135 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_16870 ed92fc450b7789a0cbd0441092ba10b7 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Gene3D G3DSA:2.40.50.100 230 308 6.3E-20 T 12-10-2018 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Gene3D G3DSA:2.40.50.100 1 78 2.0E-19 T 12-10-2018 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 253 282 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 SUPERFAMILY SSF51230 115 207 2.09E-20 T 12-10-2018 IPR011053 Single hybrid motif ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Gene3D G3DSA:4.10.320.10 351 401 2.2E-16 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Gene3D G3DSA:3.30.559.10 421 660 2.8E-78 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 SUPERFAMILY SSF51230 230 322 7.72E-23 T 12-10-2018 IPR011053 Single hybrid motif ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Gene3D G3DSA:2.40.50.100 117 194 1.2E-16 T 12-10-2018 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 139 168 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 434 659 3.4E-69 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Pfam PF02817 e3 binding domain 361 395 1.1E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 SUPERFAMILY SSF52777 423 660 4.89E-74 T 12-10-2018 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 SUPERFAMILY SSF47005 357 400 7.19E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_32220 e7b280935b35ef2448535555c3f24134 660 SUPERFAMILY SSF51230 2 92 8.9E-22 T 12-10-2018 IPR011053 Single hybrid motif ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Pfam PF00364 Biotin-requiring enzyme 2 72 1.7E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Pfam PF00364 Biotin-requiring enzyme 232 302 2.5E-17 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_32220 e7b280935b35ef2448535555c3f24134 660 Pfam PF00364 Biotin-requiring enzyme 118 187 6.6E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_10850 236d5b15b7432e384235501f726ae250 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.5E-12 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 2.5E-12 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 2.5E-12 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 SUPERFAMILY SSF51905 470 630 1.02E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10850 236d5b15b7432e384235501f726ae250 676 SUPERFAMILY SSF51395 2 368 3.14E-109 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 Gene3D G3DSA:3.40.50.720 376 669 6.6E-108 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 Gene3D G3DSA:3.50.50.60 472 628 6.6E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10850 236d5b15b7432e384235501f726ae250 676 SUPERFAMILY SSF51971 334 518 2.71E-40 T 12-10-2018 ABD1_10850 236d5b15b7432e384235501f726ae250 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 331 4.9E-78 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_10850 236d5b15b7432e384235501f726ae250 676 Gene3D G3DSA:3.20.20.70 3 369 7.6E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_10850 236d5b15b7432e384235501f726ae250 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 638 1.4E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 Gene3D G3DSA:3.30.390.30 316 402 1.4E-14 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 Gene3D G3DSA:3.50.50.60 113 238 1.3E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.0E-14 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 7.0E-14 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 7.0E-14 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.0E-14 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-11 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.6E-11 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.6E-11 T 12-10-2018 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 297 6.9E-54 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 Pfam PF14759 Reductase C-terminal 316 401 7.3E-17 T 12-10-2018 IPR028202 Reductase, C-terminal ABD1_09030 c0161003359e93b6db954aefeac4429a 403 SUPERFAMILY SSF51905 3 191 4.07E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09030 c0161003359e93b6db954aefeac4429a 403 SUPERFAMILY SSF51905 144 306 8.85E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09030 c0161003359e93b6db954aefeac4429a 403 SUPERFAMILY SSF55424 309 401 8.51E-18 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_09030 c0161003359e93b6db954aefeac4429a 403 Gene3D G3DSA:3.50.50.60 4 297 1.3E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 1.3E-32 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 SUPERFAMILY SSF51735 3 157 6.69E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 Gene3D G3DSA:3.90.110.10 157 328 4.9E-61 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 6.5E-145 T 12-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 56.726 T 12-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 SUPERFAMILY SSF56327 159 327 1.7E-58 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 7.2E-36 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 Gene3D G3DSA:3.40.50.720 1 156 6.0E-58 T 12-10-2018 ABD1_29100 057fc6c2fe918fefde1133b8ad9ac4af 328 PIRSF PIRSF000102 1 326 1.7E-63 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Pfam PF16658 Class II release factor RF3, C-terminal domain 388 515 1.2E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 5 528 51.355 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF54980 394 469 1.4E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF50447 263 394 2.36E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF52540 11 278 3.97E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 530 6.2E-257 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Pfam PF00009 Elongation factor Tu GTP binding domain 14 278 3.7E-49 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.30.70.3280 391 530 2.3E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.40.50.300 111 276 1.8E-112 T 12-10-2018 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.40.50.300 73 380 1.8E-112 T 12-10-2018 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 162 4.5E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 138 147 2.0E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 16 29 2.0E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 102 113 2.0E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 66 74 2.0E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_05180 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 86 96 2.0E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_14410 7016c22e8aa8862437e9fb1307c680bd 394 SUPERFAMILY SSF56935 32 293 1.45E-5 T 12-10-2018 ABD1_14410 7016c22e8aa8862437e9fb1307c680bd 394 Gene3D G3DSA:2.40.128.130 212 359 2.5E-5 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 7.5E-39 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 7.5E-39 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 7.5E-39 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 7.5E-39 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 7.5E-39 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF52833 1 100 2.12E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 4.3E-235 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF52833 103 195 1.08E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.50.50.60 212 509 3.4E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 Pfam PF13192 Thioredoxin domain 119 194 2.0E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 PIRSF PIRSF000238 1 521 2.3E-257 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.40.30.80 1 199 4.1E-64 T 12-10-2018 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 2.1E-46 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF51905 202 514 5.25E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_14580 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.50.50.60 327 450 3.4E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 7.5E-39 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 7.5E-39 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 7.5E-39 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 7.5E-39 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 7.5E-39 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF52833 1 100 2.12E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 4.3E-235 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF52833 103 195 1.08E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.50.50.60 212 509 3.4E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.7E-63 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 Pfam PF13192 Thioredoxin domain 119 194 2.0E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 PIRSF PIRSF000238 1 521 2.3E-257 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.40.30.80 1 199 4.1E-64 T 12-10-2018 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 2.1E-46 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 SUPERFAMILY SSF51905 202 514 5.25E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_12110 089ecc26532d4c3b9cabf3dae3fa1974 521 Gene3D G3DSA:3.50.50.60 327 450 3.4E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 SMART SM00895 95 223 2.5E-21 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 SUPERFAMILY SSF48008 94 230 3.66E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.1E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 Pfam PF07729 FCD domain 96 222 1.5E-23 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 SUPERFAMILY SSF46785 2 70 1.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 Gene3D G3DSA:1.20.120.530 94 229 3.5E-30 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 Gene3D G3DSA:1.10.10.10 1 74 3.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 SMART SM00345 7 66 9.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 3.9E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_00710 6fcdc089e736e0106868362fc5c1f519 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 3.9E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 Pfam PF00005 ABC transporter 356 497 1.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 SUPERFAMILY SSF52540 22 233 3.71E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 SMART SM00382 39 224 4.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 SMART SM00382 364 543 3.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 SUPERFAMILY SSF52540 339 556 8.59E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 Pfam PF00005 ABC transporter 32 173 1.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 Gene3D G3DSA:3.40.50.300 327 572 2.1E-64 T 12-10-2018 ABD1_16580 3af015dc7bc47453c78586abbeba854d 585 Gene3D G3DSA:3.40.50.300 2 249 9.0E-60 T 12-10-2018 ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 Pfam PF00588 SpoU rRNA Methylase family 16 166 1.4E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 PIRSF PIRSF004808 11 265 4.8E-68 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 Gene3D G3DSA:1.10.8.590 189 276 1.1E-21 T 12-10-2018 ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 Gene3D G3DSA:3.40.1280.10 12 178 6.0E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 SUPERFAMILY SSF75217 13 174 4.45E-37 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_14620 2e5318c3a1ac716c2c25c70b9a8b8530 279 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 260 7.9E-68 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 5.1E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 5.1E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 5.1E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 Pfam PF01022 Bacterial regulatory protein, arsR family 28 71 1.5E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 SUPERFAMILY SSF46785 14 101 4.54E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 Gene3D G3DSA:1.10.10.10 6 102 7.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_15470 d9fe41f62ab13f451ebb79f862595c90 102 SMART SM00418 19 97 1.0E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 51 1.7E-9 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 8.1E-7 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Gene3D G3DSA:2.160.10.10 1 195 4.0E-62 T 12-10-2018 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 6.5E-25 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 1.4E-97 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 PIRSF PIRSF000456 4 262 4.1E-104 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Gene3D G3DSA:1.20.1180.10 196 262 7.5E-26 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 42.817 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_19910 47916d2cb6273dcf33f191abffdc7373 262 SUPERFAMILY SSF51161 3 262 2.87E-78 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 Hamap MF_00268 Protein RecA [recA]. 5 329 51.762 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 210 238 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 165 194 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 243 272 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 297 314 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 93 122 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 PRINTS PR00142 RecA protein signature 127 156 9.2E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 5.1E-172 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 Gene3D G3DSA:3.30.250.10 269 327 9.0E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 Gene3D G3DSA:3.40.50.300 26 267 7.7E-85 T 12-10-2018 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 SMART SM00382 57 228 3.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 SUPERFAMILY SSF54752 269 325 6.15E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 SUPERFAMILY SSF52540 4 266 5.55E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_19880 8e71874b27f022cdea4635f8e2996eb8 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.2E-148 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 4.4E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 4.4E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 4.4E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 SUPERFAMILY SSF54909 70 153 2.55E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 Gene3D G3DSA:3.30.70.920 62 145 2.1E-19 T 12-10-2018 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 4.6E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 Gene3D G3DSA:1.10.10.10 2 61 3.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 SUPERFAMILY SSF46785 7 66 1.15E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 5.1E-18 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_15370 b8d3c5f220f6babf2d460403f310387f 162 SMART SM00344 8 117 2.2E-41 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_32410 1b9e70a2df9dc1213c1e53894db334ef 303 SUPERFAMILY SSF53474 31 297 1.08E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32410 1b9e70a2df9dc1213c1e53894db334ef 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site ABD1_32410 1b9e70a2df9dc1213c1e53894db334ef 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 2.6E-58 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_32410 1b9e70a2df9dc1213c1e53894db334ef 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 12-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 ABD1_32410 1b9e70a2df9dc1213c1e53894db334ef 303 Gene3D G3DSA:3.40.50.1820 11 302 1.9E-78 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 Gene3D G3DSA:2.40.500.20 88 204 8.3E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 2.9E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.9E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.9E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 2.9E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.9E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 Gene3D G3DSA:1.10.287.990 21 87 1.7E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 197 4.8E-37 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 SUPERFAMILY SSF46609 3 89 2.09E-36 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 1.8E-33 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 SUPERFAMILY SSF54719 90 199 6.02E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_23430 620aa7bddba5453535132ed4d30dabd8 208 PIRSF PIRSF000349 1 206 5.4E-83 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Pfam PF13356 Arm DNA-binding domain 20 88 4.7E-13 T 12-10-2018 IPR025166 Integrase, DNA-binding domain ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 144 2.5E-5 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Gene3D G3DSA:1.10.443.10 205 395 2.3E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 SUPERFAMILY SSF56349 99 385 3.53E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Gene3D G3DSA:3.30.160.390 1 99 1.7E-23 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Gene3D G3DSA:1.10.150.130 100 196 1.7E-20 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal ABD1_11850 417d02aa3274454be5b9dc4a4ba772e3 401 Pfam PF00589 Phage integrase family 207 366 8.1E-9 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 Pfam PF08362 YcdC-like protein, C-terminal region 63 206 5.0E-53 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 SUPERFAMILY SSF46689 6 83 8.72E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 Gene3D G3DSA:1.10.357.10 63 206 2.3E-46 T 12-10-2018 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 Gene3D G3DSA:1.10.10.60 1 62 1.4E-18 T 12-10-2018 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 SUPERFAMILY SSF48498 80 206 9.58E-36 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00230 17a48a5bc5a520f721a73b2c32b94216 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20540 8a9ea850bf0ecf0b90eb180948a51b97 192 Gene3D G3DSA:1.10.357.10 6 192 7.0E-28 T 12-10-2018 ABD1_20540 8a9ea850bf0ecf0b90eb180948a51b97 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 4.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20540 8a9ea850bf0ecf0b90eb180948a51b97 192 SUPERFAMILY SSF48498 84 190 2.73E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_20540 8a9ea850bf0ecf0b90eb180948a51b97 192 SUPERFAMILY SSF46689 4 69 7.7E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_05980 2aa447a2bca707ef56ef0b1eebb224c5 106 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 105 3.1E-36 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABD1_05980 2aa447a2bca707ef56ef0b1eebb224c5 106 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 18 103 3.2E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ABD1_05980 2aa447a2bca707ef56ef0b1eebb224c5 106 Gene3D G3DSA:3.30.110.10 8 106 1.0E-37 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABD1_05980 2aa447a2bca707ef56ef0b1eebb224c5 106 SUPERFAMILY SSF55200 18 106 5.36E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.7E-45 T 12-10-2018 ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 1.4E-95 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 2.1E-190 T 12-10-2018 IPR004482 Mg chelatase-related protein ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 SUPERFAMILY SSF54211 11 169 9.86E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 6.1E-28 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 Gene3D G3DSA:3.30.230.10 13 169 1.1E-13 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 SUPERFAMILY SSF52540 188 491 7.58E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 Gene3D G3DSA:3.40.50.300 186 493 5.5E-54 T 12-10-2018 ABD1_02020 879e6c579ccfbc544110c9034334d5c1 495 SMART SM00382 210 389 1.6E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_10630 0bf2ecef36fc3059577b20426c7fd7d4 213 Pfam PF01545 Cation efflux family 24 200 1.0E-13 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_10630 0bf2ecef36fc3059577b20426c7fd7d4 213 SUPERFAMILY SSF161111 19 200 7.19E-36 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_10630 0bf2ecef36fc3059577b20426c7fd7d4 213 Gene3D G3DSA:1.20.1510.10 77 201 3.4E-7 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF12836 Helix-hairpin-helix motif 482 546 7.2E-26 T 12-10-2018 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF09371 Tex-like protein N-terminal domain 8 189 2.2E-54 T 12-10-2018 IPR018974 Tex-like protein, N-terminal ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF53098 312 460 4.48E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF00575 S1 RNA binding domain 640 711 1.3E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.10.650 1 108 2.5E-36 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:3.30.420.140 315 442 3.5E-134 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF16921 Tex protein YqgF-like domain 317 442 6.4E-50 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF158832 1 311 3.53E-88 T 12-10-2018 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF47781 552 623 2.89E-19 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF47781 461 549 1.45E-26 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SMART SM00316 640 711 1.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.150.310 490 621 8.3E-49 T 12-10-2018 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SMART SM00732 316 415 4.2E-31 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.3500.10 112 489 3.5E-134 T 12-10-2018 IPR023323 Tex-like domain superfamily ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF50249 628 717 3.86E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_31080 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:2.40.50.140 622 715 1.2E-29 T 12-10-2018 ABD1_18490 e9121438d5d3ff8e4240c0448a97fee3 189 Gene3D G3DSA:1.10.357.10 1 189 2.9E-60 T 12-10-2018 ABD1_18490 e9121438d5d3ff8e4240c0448a97fee3 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18490 e9121438d5d3ff8e4240c0448a97fee3 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18490 e9121438d5d3ff8e4240c0448a97fee3 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18490 e9121438d5d3ff8e4240c0448a97fee3 189 SUPERFAMILY SSF46689 3 77 1.21E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 2.3E-43 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 Gene3D G3DSA:4.10.520.10 2 97 3.3E-34 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.567 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 SUPERFAMILY SSF47729 4 94 1.47E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 3.8E-30 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_06090 64634d28ad957e60906b59b240932cc9 98 SMART SM00411 4 93 4.8E-37 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_18630 31865ffce852585c587038ef73980c63 577 SUPERFAMILY SSF52016 378 564 1.88E-55 T 12-10-2018 ABD1_18630 31865ffce852585c587038ef73980c63 577 Pfam PF00920 Dehydratase family 40 559 9.7E-176 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_18630 31865ffce852585c587038ef73980c63 577 Gene3D G3DSA:3.50.30.80 378 532 1.2E-46 T 12-10-2018 ABD1_18630 31865ffce852585c587038ef73980c63 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_18630 31865ffce852585c587038ef73980c63 577 SUPERFAMILY SSF143975 6 377 3.14E-123 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 204 7.0E-6 T 12-10-2018 ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 4.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 SUPERFAMILY SSF51735 1 242 1.02E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 Pfam PF00106 short chain dehydrogenase 9 197 1.1E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18450 ae1f2d28b6bc22ece889dc889977d73a 303 Gene3D G3DSA:3.40.50.720 8 298 5.0E-75 T 12-10-2018 ABD1_12610 c86704c32c3ac4f92829f866e1be3837 182 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 178 8.1E-33 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related ABD1_12610 c86704c32c3ac4f92829f866e1be3837 182 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 178 6.1E-35 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ABD1_12610 c86704c32c3ac4f92829f866e1be3837 182 Gene3D G3DSA:2.60.450.10 58 182 1.6E-8 T 12-10-2018 ABD1_04970 efaccaeb3f8f60a6681baa8bbc421412 218 Gene3D G3DSA:3.90.470.20 96 186 2.8E-29 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_04970 efaccaeb3f8f60a6681baa8bbc421412 218 Gene3D G3DSA:3.90.470.20 42 95 2.8E-29 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_04970 efaccaeb3f8f60a6681baa8bbc421412 218 SUPERFAMILY SSF56214 25 86 1.26E-9 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_04970 efaccaeb3f8f60a6681baa8bbc421412 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 96 176 2.6E-14 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_04970 efaccaeb3f8f60a6681baa8bbc421412 218 SUPERFAMILY SSF56214 95 204 3.4E-21 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_25020 b5a737186fcec6f29e937f2098eb065a 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 4.1E-102 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABD1_25020 b5a737186fcec6f29e937f2098eb065a 241 Gene3D G3DSA:3.20.20.70 1 241 3.6E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_25020 b5a737186fcec6f29e937f2098eb065a 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 127.578 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABD1_25020 b5a737186fcec6f29e937f2098eb065a 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 1.1E-96 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABD1_25020 b5a737186fcec6f29e937f2098eb065a 241 SUPERFAMILY SSF63892 3 238 2.48E-98 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABD1_25290 70a5cec3589aa4c5ba7040a30d34fcf1 197 SUPERFAMILY SSF52402 5 193 1.26E-48 T 12-10-2018 ABD1_25290 70a5cec3589aa4c5ba7040a30d34fcf1 197 Pfam PF01902 Diphthamide synthase 2 193 5.1E-36 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 ABD1_25290 70a5cec3589aa4c5ba7040a30d34fcf1 197 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 4 194 6.7E-35 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 ABD1_25290 70a5cec3589aa4c5ba7040a30d34fcf1 197 Gene3D G3DSA:3.90.1490.10 119 197 1.2E-12 T 12-10-2018 ABD1_25290 70a5cec3589aa4c5ba7040a30d34fcf1 197 Gene3D G3DSA:3.40.50.620 1 117 2.0E-15 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 Pfam PF07883 Cupin domain 110 172 3.9E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 SMART SM00530 11 66 6.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 Gene3D G3DSA:2.60.120.10 91 182 1.7E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 Gene3D G3DSA:1.10.260.40 2 77 1.3E-17 T 12-10-2018 ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 SUPERFAMILY SSF47413 5 72 3.1E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 Pfam PF01381 Helix-turn-helix 14 64 2.6E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_31790 528c0e72e4300578df830e0ffb46b180 182 SUPERFAMILY SSF51182 59 178 1.04E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_26200 059366aabb868db6e7fc4b03d987ba7e 309 Gene3D G3DSA:2.60.200.40 136 293 3.5E-17 T 12-10-2018 ABD1_26200 059366aabb868db6e7fc4b03d987ba7e 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 130 2.5E-22 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABD1_26200 059366aabb868db6e7fc4b03d987ba7e 309 Gene3D G3DSA:3.40.50.10330 2 135 2.8E-24 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABD1_26200 059366aabb868db6e7fc4b03d987ba7e 309 SUPERFAMILY SSF111331 2 304 1.14E-55 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABD1_26200 059366aabb868db6e7fc4b03d987ba7e 309 SMART SM00046 3 135 1.7E-4 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 Gene3D G3DSA:3.40.50.300 116 312 7.3E-14 T 12-10-2018 ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 Pfam PF00271 Helicase conserved C-terminal domain 422 504 5.8E-6 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 Pfam PF00270 DEAD/DEAH box helicase 143 293 3.3E-9 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 SMART SM00490 412 505 2.3E-8 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 Gene3D G3DSA:3.40.50.300 338 528 7.6E-29 T 12-10-2018 ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 SUPERFAMILY SSF52540 157 514 4.19E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_17780 971ab64b9f026581ab11fada6c69b985 833 SMART SM00487 137 308 0.003 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 SMART SM00825 Beta-ketoacyl synthase 4 408 1.0E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 SUPERFAMILY SSF53901 215 405 2.71E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 3.9E-41 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 Gene3D G3DSA:3.40.47.10 260 407 8.9E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 362 3.0E-29 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 SUPERFAMILY SSF53901 1 251 1.78E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04950 fdeee24af2bb489db150865714ddf34c 408 Gene3D G3DSA:3.40.47.10 1 254 3.2E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 SUPERFAMILY SSF53681 22 125 1.44E-34 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 Hamap MF_00258 Glutamate racemase [murI]. 21 276 33.984 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 4.6E-29 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 264 4.0E-65 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 SUPERFAMILY SSF53681 127 267 3.49E-29 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 Gene3D G3DSA:3.40.50.1860 114 227 1.2E-75 T 12-10-2018 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_03510 7eaa5ccae2610c96036cfe060fbdc37d 288 Gene3D G3DSA:3.40.50.1860 22 263 1.2E-75 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 Gene3D G3DSA:1.10.40.30 363 443 1.0E-31 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 SUPERFAMILY SSF48557 4 444 1.88E-118 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 Gene3D G3DSA:1.10.275.10 7 105 6.0E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 4 348 9.3E-116 T 12-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.5E-21 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 2.5E-21 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 2.5E-21 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 2.5E-21 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 Gene3D G3DSA:1.20.200.10 106 361 4.8E-101 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 Pfam PF00206 Lyase 15 299 2.5E-55 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 5.4E-9 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 5.4E-9 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 5.4E-9 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 5.4E-9 T 12-10-2018 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 SMART SM00998 364 443 5.1E-29 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_19100 169493cf1d116ab2df8e906206febd6e 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 1.0E-19 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_22640 067ac8856fff0b980948ad703fe7cf47 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.073 T 12-10-2018 IPR005583 Peroxide stress protein YaaA ABD1_22640 067ac8856fff0b980948ad703fe7cf47 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.9E-90 T 12-10-2018 IPR005583 Peroxide stress protein YaaA ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 885 192.228 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 864 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Gene3D G3DSA:3.30.980.10 567 708 6.0E-49 T 12-10-2018 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Pfam PF02272 DHHA1 domain 750 881 6.9E-23 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 SUPERFAMILY SSF55681 8 260 6.71E-106 T 12-10-2018 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Gene3D G3DSA:3.10.310.40 775 883 3.8E-25 T 12-10-2018 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 SMART SM00863 658 707 1.2E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 SUPERFAMILY SSF101353 261 466 6.15E-59 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 SUPERFAMILY SSF50447 459 557 3.21E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_11860 51ace01fc88814963cca080a73ce685b 885 SUPERFAMILY SSF55186 558 722 1.44E-47 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Gene3D G3DSA:2.40.30.130 464 557 6.3E-10 T 12-10-2018 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Gene3D G3DSA:3.30.930.10 8 257 5.8E-120 T 12-10-2018 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 707 5.4E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 241 254 8.6E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 287 303 8.6E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 311 324 8.6E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 214 225 8.6E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 81 92 8.6E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Pfam PF01411 tRNA synthetases class II (A) 12 558 5.1E-221 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ABD1_11860 51ace01fc88814963cca080a73ce685b 885 Gene3D G3DSA:3.30.54.20 629 688 6.0E-49 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 394 400 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 305 321 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 787 803 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 872 893 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 322 341 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 767 780 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 717 732 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 426 439 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 822 843 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 PRINTS PR01836 Magnesium-transporting ATPase signature 735 746 1.2E-78 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Gene3D G3DSA:1.20.1110.10 700 819 9.7E-10 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 388 673 3.1E-20 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 SUPERFAMILY SSF81660 361 561 9.15E-43 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Gene3D G3DSA:2.70.150.10 136 273 6.3E-28 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 38 918 0.0 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Gene3D G3DSA:3.40.50.1000 566 699 1.5E-22 T 12-10-2018 IPR023214 HAD superfamily ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 SUPERFAMILY SSF81653 191 291 1.07E-27 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Gene3D G3DSA:1.20.1110.10 275 403 6.9E-10 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Pfam PF00122 E1-E2 ATPase 189 372 4.0E-44 T 12-10-2018 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 SUPERFAMILY SSF81665 53 916 1.31E-98 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 SUPERFAMILY SSF56784 549 704 1.06E-38 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 628 748 3.9E-29 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 193 426 1.6E-30 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Gene3D G3DSA:3.40.1110.10 404 565 1.6E-57 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 SMART SM00831 49 122 4.6E-10 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 ABD1_20660 9dcca1c483e9b06a135b6131899e7256 918 Pfam PF00690 Cation transporter/ATPase, N-terminus 56 117 1.6E-12 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 ABD1_12290 7e2dc26b213153e282ae0e22681eb50b 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 112 7.8E-19 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ABD1_12290 7e2dc26b213153e282ae0e22681eb50b 135 SUPERFAMILY SSF51316 1 132 3.77E-39 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_12290 7e2dc26b213153e282ae0e22681eb50b 135 Gene3D G3DSA:3.90.1590.10 2 118 3.4E-23 T 12-10-2018 ABD1_05710 234b39cc21ab84fd3238d91b21c24e62 135 Gene3D G3DSA:3.30.1330.40 7 135 1.7E-23 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_05710 234b39cc21ab84fd3238d91b21c24e62 135 SUPERFAMILY SSF55298 5 134 1.03E-23 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_05710 234b39cc21ab84fd3238d91b21c24e62 135 Pfam PF01042 Endoribonuclease L-PSP 20 134 1.2E-17 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 7.0E-17 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF55781 4 162 1.2E-33 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 SMART SM00065 21 168 7.9E-23 T 12-10-2018 IPR003018 GAF domain GO:0005515 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:1.10.274.10 201 325 9.0E-59 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.30.450.40 2 168 5.3E-49 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 185 735 3.5E-127 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF51621 432 726 1.39E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF13185 GAF domain 21 158 1.3E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.50.30.10 184 411 9.0E-59 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 9.0E-23 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 9.0E-23 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 9.0E-23 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 9.0E-23 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF47831 209 320 1.44E-26 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF52009 304 423 1.11E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.20.20.60 412 752 1.2E-105 T 12-10-2018 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 8.7E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ABD1_03820 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 3.1E-96 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 6.7E-145 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 SMART SM00937 30 140 1.6E-58 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:3.30.160.20 171 266 3.5E-96 T 12-10-2018 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.237 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 SUPERFAMILY SSF75620 2 307 1.7E-125 T 12-10-2018 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Pfam PF00472 RF-1 domain 173 282 1.1E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:1.20.58.410 1 61 4.3E-10 T 12-10-2018 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:3.30.70.1660 75 303 3.5E-96 T 12-10-2018 ABD1_32110 2c2e598da9c911128cab4d2da073ab5d 310 Pfam PF03462 PCRF domain 2 165 5.0E-53 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABD1_09180 c77fdec42b7f8190fad6aa378d9ab920 381 SUPERFAMILY SSF74650 26 377 8.79E-109 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABD1_09180 c77fdec42b7f8190fad6aa378d9ab920 381 Pfam PF01263 Aldose 1-epimerase 38 376 5.9E-95 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ABD1_09180 c77fdec42b7f8190fad6aa378d9ab920 381 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 201 210 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ABD1_09180 c77fdec42b7f8190fad6aa378d9ab920 381 PIRSF PIRSF005096 19 380 4.1E-128 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ABD1_09180 c77fdec42b7f8190fad6aa378d9ab920 381 Gene3D G3DSA:2.70.98.10 28 379 3.5E-121 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 Gene3D G3DSA:1.20.58.180 217 298 2.2E-35 T 12-10-2018 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 Gene3D G3DSA:3.30.930.10 3 216 5.0E-113 T 12-10-2018 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.334 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 SUPERFAMILY SSF55681 10 292 5.74E-137 T 12-10-2018 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.3E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 2.2E-163 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30050 7c4219d5dc6f531c87b7e41a301cc226 325 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.2E-153 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_33440 ef0590d8f674e1f7614d9b8e8c7ac185 396 Pfam PF07690 Major Facilitator Superfamily 14 346 3.1E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_33440 ef0590d8f674e1f7614d9b8e8c7ac185 396 SUPERFAMILY SSF103473 8 383 3.53E-52 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_33440 ef0590d8f674e1f7614d9b8e8c7ac185 396 Gene3D G3DSA:1.20.1250.20 1 382 8.3E-41 T 12-10-2018 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF47226 197 299 2.49E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1078 1214 7.0E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF47226 732 812 1.44E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF00072 Response regulator receiver domain 1382 1493 3.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM01231 893 1030 4.0E-9 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:2.40.50.180 1239 1308 2.7E-34 T 12-10-2018 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF01584 CheW-like domain 1221 1356 8.1E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:3.40.50.12740 1379 1505 1.6E-38 T 12-10-2018 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:2.30.30.40 1216 1349 2.7E-34 T 12-10-2018 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF55874 1033 1213 1.83E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00387 1075 1216 7.0E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF52172 1381 1497 7.83E-37 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:3.30.565.10 1029 1215 6.8E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1176 1194 9.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1200 1213 9.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1120 1134 9.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:1.20.120.160 23 150 9.0E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:1.20.120.160 729 852 3.4E-17 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00073 196 291 0.054 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00073 521 618 8.3E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00073 23 122 0.017 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00073 726 823 2.3E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF01627 Hpt domain 523 612 4.7E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF01627 Hpt domain 732 796 3.1E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF01627 Hpt domain 199 281 7.5E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Pfam PF01627 Hpt domain 25 106 7.1E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF47226 520 637 2.22E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF47226 23 112 4.84E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00448 1380 1493 2.4E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SUPERFAMILY SSF50341 1215 1352 2.88E-22 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:1.20.120.160 521 657 4.0E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 Gene3D G3DSA:1.20.120.160 194 328 1.6E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_27560 29b9d037c39b0be9c9f0fec1e993a817 1506 SMART SM00260 1208 1354 5.4E-28 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 SUPERFAMILY SSF46548 138 255 1.1E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 Pfam PF13484 4Fe-4S double cluster binding domain 191 255 5.0E-20 T 12-10-2018 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 348 1.1E-140 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 6 314 45.765 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 Pfam PF08331 Domain of unknown function (DUF1730) 61 139 7.7E-24 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 ABD1_15170 bb132b8747742db9b8c082e2033bacd9 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 192 203 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_26080 0ec0dda73fea8520903e6d956dce3650 127 Gene3D G3DSA:3.30.1050.10 8 118 1.4E-12 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ABD1_26080 0ec0dda73fea8520903e6d956dce3650 127 Pfam PF02036 SCP-2 sterol transfer family 34 108 1.7E-7 T 12-10-2018 IPR003033 SCP2 sterol-binding domain ABD1_26080 0ec0dda73fea8520903e6d956dce3650 127 SUPERFAMILY SSF55718 4 108 3.3E-12 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ABD1_31690 a6baf588746a1954c343663e460f3119 140 Gene3D G3DSA:2.170.150.70 5 120 1.0E-14 T 12-10-2018 ABD1_31690 a6baf588746a1954c343663e460f3119 140 SUPERFAMILY SSF51316 1 136 2.3E-44 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_31690 a6baf588746a1954c343663e460f3119 140 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 116 4.8E-26 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 SUPERFAMILY SSF53271 14 130 2.17E-10 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 SUPERFAMILY SSF53271 159 281 1.97E-18 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 SMART SM01400 1 105 0.0017 T 12-10-2018 ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 Gene3D G3DSA:3.40.50.2020 150 289 6.8E-24 T 12-10-2018 ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 Gene3D G3DSA:3.40.50.2020 8 142 2.1E-12 T 12-10-2018 ABD1_18020 fe2cc3c975bc78db7e70361d0a70296f 294 Pfam PF00156 Phosphoribosyl transferase domain 153 259 1.3E-9 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 Gene3D G3DSA:3.40.50.300 9 257 2.9E-74 T 12-10-2018 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 Gene3D G3DSA:3.30.70.260 262 356 1.1E-8 T 12-10-2018 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 SUPERFAMILY SSF55021 267 351 2.63E-10 T 12-10-2018 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 Pfam PF09383 NIL domain 277 327 8.3E-8 T 12-10-2018 IPR018449 NIL domain ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 SMART SM00382 43 231 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 SUPERFAMILY SSF52540 15 252 1.54E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 Pfam PF00005 ABC transporter 34 182 5.5E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_14830 52e61fbf01c6b06c5924d2c69442f308 356 SMART SM00930 274 349 1.6E-4 T 12-10-2018 IPR018449 NIL domain ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 9.3E-106 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 12-10-2018 IPR033135 ClpP, histidine active site ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 Pfam PF00574 Clp protease 20 199 1.8E-88 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 SUPERFAMILY SSF52096 18 199 2.64E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 12-10-2018 IPR018215 ClpP, Ser active site ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 6.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 6.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 6.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 6.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 6.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.953 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABD1_04490 fe5be350711601f9b290c7d0963e41da 201 Gene3D G3DSA:3.90.226.10 3 201 7.2E-83 T 12-10-2018 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.133 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.1E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 Gene3D G3DSA:3.50.7.10 173 379 4.4E-240 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 SUPERFAMILY SSF54849 138 204 1.65E-21 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.6E-95 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ABD1_26170 18526e787d4d1173e90b065732d33f81 544 SUPERFAMILY SSF52029 184 376 3.89E-84 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 Gene3D G3DSA:3.30.260.10 138 410 4.4E-240 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 Gene3D G3DSA:1.10.560.10 8 521 4.4E-240 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 SUPERFAMILY SSF48592 7 521 9.92E-79 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABD1_26170 18526e787d4d1173e90b065732d33f81 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABD1_05730 795790ca9248bf64399c89717b35df2e 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 ABD1_05730 795790ca9248bf64399c89717b35df2e 375 SUPERFAMILY SSF52283 1 167 2.55E-48 T 12-10-2018 ABD1_05730 795790ca9248bf64399c89717b35df2e 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 1.1E-72 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABD1_05730 795790ca9248bf64399c89717b35df2e 375 SMART SM01002 145 316 4.6E-76 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABD1_05730 795790ca9248bf64399c89717b35df2e 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.0E-38 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ABD1_05730 795790ca9248bf64399c89717b35df2e 375 SMART SM01003 4 136 5.0E-54 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ABD1_05730 795790ca9248bf64399c89717b35df2e 375 Gene3D G3DSA:3.40.50.720 3 369 2.6E-131 T 12-10-2018 ABD1_05730 795790ca9248bf64399c89717b35df2e 375 SUPERFAMILY SSF51735 136 321 4.13E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_05730 795790ca9248bf64399c89717b35df2e 375 Gene3D G3DSA:3.40.50.720 136 323 2.6E-131 T 12-10-2018 ABD1_05730 795790ca9248bf64399c89717b35df2e 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 ABD1_14100 7c29cce8b0cd85a09ef080ec2c6e6950 169 SUPERFAMILY SSF52821 42 166 1.12E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_14100 7c29cce8b0cd85a09ef080ec2c6e6950 169 SMART SM00450 46 152 2.4E-13 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_14100 7c29cce8b0cd85a09ef080ec2c6e6950 169 Gene3D G3DSA:3.40.250.10 40 169 4.7E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_14100 7c29cce8b0cd85a09ef080ec2c6e6950 169 Pfam PF00581 Rhodanese-like domain 48 145 1.7E-13 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_18510 56ea59602c4fbfe79e48b5168342f329 141 SUPERFAMILY SSF46785 2 103 8.57E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18510 56ea59602c4fbfe79e48b5168342f329 141 Pfam PF02082 Transcriptional regulator 2 42 4.7E-11 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type ABD1_18510 56ea59602c4fbfe79e48b5168342f329 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 8 26 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABD1_18510 56ea59602c4fbfe79e48b5168342f329 141 Gene3D G3DSA:1.10.10.10 1 107 7.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 SUPERFAMILY SSF46785 20 102 4.67E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 Gene3D G3DSA:3.40.190.10 181 282 1.1E-43 T 12-10-2018 ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.2E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 Pfam PF03466 LysR substrate binding domain 104 311 3.2E-31 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 SUPERFAMILY SSF53850 105 316 4.34E-33 T 12-10-2018 ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 Gene3D G3DSA:1.10.10.10 19 105 2.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31740 cfe812866505ab7cc54c13347a80dfec 324 Gene3D G3DSA:3.40.190.10 107 308 1.1E-43 T 12-10-2018 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 SMART SM00987 62 223 7.2E-36 T 12-10-2018 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 SUPERFAMILY SSF52141 15 235 5.45E-91 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 2.4E-84 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 SMART SM00986 62 223 7.2E-36 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 1.4E-24 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 40.59 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_15760 30204545a029f896c3d4f25fab163c9b 237 Gene3D G3DSA:3.40.470.10 1 237 3.1E-100 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 SUPERFAMILY SSF46955 2 124 6.23E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 Gene3D G3DSA:1.10.1660.10 1 125 6.3E-32 T 12-10-2018 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 Pfam PF00376 MerR family regulatory protein 3 39 2.5E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 Pfam PF09278 MerR, DNA binding 45 109 1.6E-13 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 2.3E-64 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 ABD1_13300 d12e531241222d7f116b5d3821258e0b 142 SMART SM00422 2 70 9.3E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 1.5E-9 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 SMART SM00344 1 107 9.2E-20 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:1.10.10.10 1 52 3.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 7.7E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:3.30.70.920 56 140 5.3E-13 T 12-10-2018 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF46785 1 56 2.16E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.8E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.8E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.8E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_11030 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF54909 64 139 6.43E-11 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_03930 55d09d9cfdd2f0f79c74b8eb224e03c9 341 SUPERFAMILY SSF46689 288 338 6.27E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_03930 55d09d9cfdd2f0f79c74b8eb224e03c9 341 Gene3D G3DSA:1.10.10.60 233 341 1.1E-25 T 12-10-2018 ABD1_03930 55d09d9cfdd2f0f79c74b8eb224e03c9 341 SMART SM00342 253 335 3.8E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_03930 55d09d9cfdd2f0f79c74b8eb224e03c9 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 207 9.0E-35 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_03930 55d09d9cfdd2f0f79c74b8eb224e03c9 341 Pfam PF12833 Helix-turn-helix domain 259 337 7.8E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_03140 fe2909a459fb8b37a2e10bb62a81afff 175 PIRSF PIRSF019239 7 170 1.2E-48 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ABD1_03140 fe2909a459fb8b37a2e10bb62a81afff 175 Pfam PF01899 Na+/H+ ion antiporter subunit 18 164 1.1E-36 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 Gene3D G3DSA:2.40.30.20 1 88 1.0E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 Gene3D G3DSA:2.40.30.20 101 205 2.5E-34 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 Pfam PF00677 Lumazine binding domain 99 183 3.4E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 Pfam PF00677 Lumazine binding domain 3 86 4.9E-22 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.2E-64 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 SUPERFAMILY SSF63380 92 193 6.63E-32 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_02090 e72432d01f6700bae27e432f6121e909 219 PIRSF PIRSF000498 1 212 3.2E-78 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_02090 e72432d01f6700bae27e432f6121e909 219 SUPERFAMILY SSF63380 1 88 3.23E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 6.9E-25 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.385 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 Pfam PF00471 Ribosomal protein L33 4 49 6.1E-18 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 Gene3D G3DSA:2.20.28.120 1 51 2.9E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04180 0085f46dd607ca4be0ac10cf06490dfb 51 SUPERFAMILY SSF57829 1 49 1.28E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.858 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 Pfam PF00230 Major intrinsic protein 2 221 1.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 SUPERFAMILY SSF81338 2 225 2.62E-66 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.6E-52 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 4.7E-58 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABD1_31270 103531040fb20db9010d4fbfd9d6f67f 229 Gene3D G3DSA:1.20.1080.10 1 228 1.3E-82 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ABD1_23840 37e6c673406fadee25491f589312537b 697 SUPERFAMILY SSF52777 454 697 1.1E-36 T 12-10-2018 ABD1_23840 37e6c673406fadee25491f589312537b 697 Gene3D G3DSA:3.30.559.30 453 697 2.2E-74 T 12-10-2018 ABD1_23840 37e6c673406fadee25491f589312537b 697 Gene3D G3DSA:3.30.559.10 282 645 2.2E-74 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_23840 37e6c673406fadee25491f589312537b 697 SUPERFAMILY SSF52777 15 166 4.11E-8 T 12-10-2018 ABD1_23840 37e6c673406fadee25491f589312537b 697 Gene3D G3DSA:3.40.50.1820 181 281 1.6E-13 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23840 37e6c673406fadee25491f589312537b 697 Pfam PF00668 Condensation domain 274 697 2.6E-57 T 12-10-2018 IPR001242 Condensation domain ABD1_23840 37e6c673406fadee25491f589312537b 697 ProSitePatterns PS00012 Phosphopantetheine attachment site. 217 232 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site ABD1_23840 37e6c673406fadee25491f589312537b 697 SUPERFAMILY SSF52777 278 449 5.0E-35 T 12-10-2018 ABD1_23840 37e6c673406fadee25491f589312537b 697 SUPERFAMILY SSF47336 188 257 3.14E-12 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_23840 37e6c673406fadee25491f589312537b 697 Pfam PF00550 Phosphopantetheine attachment site 204 257 4.8E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 4.7E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 1.2E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 1.2E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 2.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 SUPERFAMILY SSF54523 5 122 1.15E-23 T 12-10-2018 ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 26 115 2.7E-15 T 12-10-2018 IPR031982 Type IV minor pilin ComP ABD1_30500 3cb128c50dbc24c94c6841c87fce20df 141 Gene3D G3DSA:3.30.700.10 5 138 4.7E-23 T 12-10-2018 ABD1_26540 2402886506c70fff0b228849aebcd648 236 SUPERFAMILY SSF54292 3 105 4.01E-27 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_26540 2402886506c70fff0b228849aebcd648 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 4.0E-31 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26540 2402886506c70fff0b228849aebcd648 236 Gene3D G3DSA:1.10.1060.10 106 235 1.1E-55 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABD1_26540 2402886506c70fff0b228849aebcd648 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 6.2E-9 T 12-10-2018 ABD1_26540 2402886506c70fff0b228849aebcd648 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 7.5E-84 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26540 2402886506c70fff0b228849aebcd648 236 SUPERFAMILY SSF46548 106 233 2.27E-37 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABD1_26540 2402886506c70fff0b228849aebcd648 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_26540 2402886506c70fff0b228849aebcd648 236 Gene3D G3DSA:3.10.20.30 1 105 9.7E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 Gene3D G3DSA:3.40.640.10 143 362 2.8E-88 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 SMART SM00345 7 66 3.3E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 SUPERFAMILY SSF46785 3 76 1.52E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.2E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 Pfam PF00155 Aminotransferase class I and II 117 457 8.5E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 Gene3D G3DSA:3.90.1150.10 99 466 2.8E-88 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 Gene3D G3DSA:1.10.10.10 1 68 4.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_22940 50ceae2b5fce556f7e181b9255448e62 486 SUPERFAMILY SSF53383 96 469 4.92E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_16860 0729e66ae571ab48869aefe573375691 334 PIRSF PIRSF037167 5 332 1.3E-136 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ABD1_16860 0729e66ae571ab48869aefe573375691 334 SUPERFAMILY SSF53335 21 318 5.47E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_16860 0729e66ae571ab48869aefe573375691 334 Pfam PF05175 Methyltransferase small domain 147 256 3.3E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABD1_16860 0729e66ae571ab48869aefe573375691 334 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 50.111 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ABD1_16860 0729e66ae571ab48869aefe573375691 334 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_16860 0729e66ae571ab48869aefe573375691 334 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 328 2.6E-77 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ABD1_16860 0729e66ae571ab48869aefe573375691 334 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 4.4E-112 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ABD1_16860 0729e66ae571ab48869aefe573375691 334 Gene3D G3DSA:3.40.50.150 109 308 1.0E-49 T 12-10-2018 ABD1_33210 ea4191f5b6431c343cdc7080c7e07d3a 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 10 420 3.6E-49 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_33210 ea4191f5b6431c343cdc7080c7e07d3a 447 PIRSF PIRSF006603 1 445 5.6E-51 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_33210 ea4191f5b6431c343cdc7080c7e07d3a 447 Pfam PF01554 MatE 10 169 1.4E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_33210 ea4191f5b6431c343cdc7080c7e07d3a 447 Pfam PF01554 MatE 237 390 1.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 232 451 7.9E-79 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 Pfam PF00929 Exonuclease 234 391 3.4E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_10730 febd93627a5521f2e27803ee282e699a 459 SUPERFAMILY SSF53098 4 138 5.06E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_10730 febd93627a5521f2e27803ee282e699a 459 SMART SM00479 232 402 2.0E-40 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_10730 febd93627a5521f2e27803ee282e699a 459 Gene3D G3DSA:3.30.420.10 225 407 5.1E-49 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 27.534 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 Pfam PF00075 RNase H 4 136 1.3E-41 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 SUPERFAMILY SSF53098 225 401 9.62E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_10730 febd93627a5521f2e27803ee282e699a 459 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 234 440 4.2E-57 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_10730 febd93627a5521f2e27803ee282e699a 459 Gene3D G3DSA:3.30.420.10 1 159 1.2E-52 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 Gene3D G3DSA:1.10.8.450 252 286 1.6E-108 T 12-10-2018 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 43 325 5.9E-79 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 SMART SM00062 42 257 6.3E-21 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 SUPERFAMILY SSF53850 41 274 3.81E-50 T 12-10-2018 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 Gene3D G3DSA:3.40.190.10 43 317 1.6E-108 T 12-10-2018 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 Gene3D G3DSA:3.40.190.10 121 220 1.6E-108 T 12-10-2018 ABD1_00270 d62cce84acbebc555661e2e2be7b5a72 327 Pfam PF13379 NMT1-like family 39 265 2.1E-19 T 12-10-2018 ABD1_02980 b8aed271122dab7c25032de99db273bb 436 SMART SM00028 64 97 0.27 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_02980 b8aed271122dab7c25032de99db273bb 436 SMART SM00028 30 63 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_02980 b8aed271122dab7c25032de99db273bb 436 SUPERFAMILY SSF48452 42 121 1.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_02980 b8aed271122dab7c25032de99db273bb 436 Gene3D G3DSA:1.25.40.10 12 137 6.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_02520 dfaff7ef0fdd53f20c595fbd82829d97 278 Pfam PF11356 Type II secretion system protein C 26 146 9.1E-15 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal ABD1_02520 dfaff7ef0fdd53f20c595fbd82829d97 278 Gene3D G3DSA:2.30.42.10 176 276 5.2E-13 T 12-10-2018 ABD1_02520 dfaff7ef0fdd53f20c595fbd82829d97 278 SMART SM00228 200 269 7.0E-4 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_02520 dfaff7ef0fdd53f20c595fbd82829d97 278 Gene3D G3DSA:2.30.30.830 82 147 2.7E-7 T 12-10-2018 ABD1_02520 dfaff7ef0fdd53f20c595fbd82829d97 278 SUPERFAMILY SSF50156 186 275 2.76E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 30 91 4.2E-23 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 Gene3D G3DSA:1.10.150.280 19 91 5.1E-22 T 12-10-2018 ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 SUPERFAMILY SSF47781 28 89 1.78E-26 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 Pfam PF12836 Helix-hairpin-helix motif 29 90 5.5E-22 T 12-10-2018 ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 SMART SM00278 40 59 0.021 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_05880 ff5e2b1d36ff73c69f6d282422300e18 92 SMART SM00278 70 89 92.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_21640 725eb08aad4ebb081da59b71f0281561 251 Pfam PF06271 RDD family 88 245 2.6E-22 T 12-10-2018 IPR010432 RDD ABD1_21640 725eb08aad4ebb081da59b71f0281561 251 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 9.9E-16 T 12-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 4 446 69.222 T 12-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 Gene3D G3DSA:3.40.50.620 17 194 8.4E-119 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 SUPERFAMILY SSF69864 193 445 6.67E-82 T 12-10-2018 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 Gene3D G3DSA:1.10.287.400 380 443 2.4E-31 T 12-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 2.4E-166 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 Pfam PF00764 Arginosuccinate synthase 19 412 4.5E-62 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 SUPERFAMILY SSF52402 7 191 3.97E-35 T 12-10-2018 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 Gene3D G3DSA:3.90.1260.10 77 370 8.4E-119 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_10840 ccefa28f7e6cefca64c045fca11a0dfc 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Pfam PF02728 Copper amine oxidase, N3 domain 219 320 5.5E-22 T 12-10-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Gene3D G3DSA:3.30.457.10 39 117 1.4E-21 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Gene3D G3DSA:3.10.450.40 220 325 2.1E-29 T 12-10-2018 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 718 731 - T 12-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Pfam PF07833 Copper amine oxidase N-terminal domain 40 113 2.0E-6 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 489 502 - T 12-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Gene3D G3DSA:2.70.98.20 347 756 7.5E-155 T 12-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Pfam PF01179 Copper amine oxidase, enzyme domain 339 756 5.5E-126 T 12-10-2018 IPR015798 Copper amine oxidase, catalytic domain GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 SUPERFAMILY SSF49998 335 756 9.68E-139 T 12-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 SUPERFAMILY SSF54416 219 329 8.04E-26 T 12-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Pfam PF02727 Copper amine oxidase, N2 domain 127 211 2.6E-12 T 12-10-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 SUPERFAMILY SSF54416 126 215 6.87E-18 T 12-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 Gene3D G3DSA:3.10.450.40 119 219 5.8E-33 T 12-10-2018 ABD1_18770 4aa278cdf4e4a03c1a5f5408283d3aae 768 SUPERFAMILY SSF55383 40 118 4.84E-9 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 Gene3D G3DSA:1.20.1050.10 61 185 1.0E-27 T 12-10-2018 ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 SUPERFAMILY SSF47616 61 185 8.07E-21 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 SUPERFAMILY SSF52833 1 57 1.59E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 Gene3D G3DSA:3.40.30.10 1 60 2.0E-16 T 12-10-2018 ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 56 3.4E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_01400 e93141745e4e221ba433c2cb34f21a91 199 Pfam PF14497 Glutathione S-transferase, C-terminal domain 112 183 2.4E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_29200 90193c92136fe74b498e2e7ed6f572b3 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 1.1E-45 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 ABD1_29200 90193c92136fe74b498e2e7ed6f572b3 197 Pfam PF03358 NADPH-dependent FMN reductase 12 125 1.6E-9 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABD1_29200 90193c92136fe74b498e2e7ed6f572b3 197 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ABD1_29200 90193c92136fe74b498e2e7ed6f572b3 197 Gene3D G3DSA:3.40.50.360 1 196 7.5E-63 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_29200 90193c92136fe74b498e2e7ed6f572b3 197 SUPERFAMILY SSF52218 4 195 6.55E-59 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 Gene3D G3DSA:3.30.450.40 91 269 6.0E-38 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 Pfam PF01614 Bacterial transcriptional regulator 141 267 6.9E-35 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 SUPERFAMILY SSF55781 88 268 3.47E-35 T 12-10-2018 ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 Pfam PF09339 IclR helix-turn-helix domain 26 74 9.6E-17 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 SUPERFAMILY SSF46785 24 95 4.6E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 Gene3D G3DSA:1.10.10.10 8 90 2.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_08970 3e3d37217af40dfc18aacaa7c33aef18 270 SMART SM00346 23 112 1.1E-34 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 PIRSF PIRSF036643 874 926 21.0 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 PIRSF PIRSF036643 5 750 4.7E-152 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 21 39 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 70 1.2E-19 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Gene3D G3DSA:2.20.25.90 16 71 7.1E-18 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Gene3D G3DSA:3.40.50.740 91 594 5.3E-171 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Pfam PF04324 BFD-like [2Fe-2S] binding domain 869 918 9.0E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Pfam PF00384 Molybdopterin oxidoreductase 90 504 7.2E-83 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 SUPERFAMILY SSF53706 17 616 4.97E-183 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Gene3D G3DSA:3.40.228.10 157 598 5.3E-171 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Gene3D G3DSA:1.10.10.1100 869 925 1.9E-5 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Pfam PF01568 Molydopterin dinucleotide binding domain 614 725 1.6E-28 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 Gene3D G3DSA:2.40.40.20 611 731 1.8E-38 T 12-10-2018 ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 SUPERFAMILY SSF50692 604 745 1.13E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABD1_20290 7fad11471d69f2f8bc4ec9df04dee8e8 926 SMART SM00926 16 73 5.8E-20 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_27770 668fcaeb8aa911a53e2f50e1028c5af6 96 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ABD1_27770 668fcaeb8aa911a53e2f50e1028c5af6 96 Pfam PF00639 PPIC-type PPIASE domain 14 88 1.3E-20 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ABD1_27770 668fcaeb8aa911a53e2f50e1028c5af6 96 SUPERFAMILY SSF54534 4 88 6.15E-27 T 12-10-2018 ABD1_27770 668fcaeb8aa911a53e2f50e1028c5af6 96 Gene3D G3DSA:3.10.50.40 1 91 3.7E-31 T 12-10-2018 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 SUPERFAMILY SSF52499 1 211 4.58E-65 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PIRSF PIRSF001111 1 213 8.8E-104 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 Pfam PF00857 Isochorismatase family 32 205 6.6E-38 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 Gene3D G3DSA:3.40.50.850 1 210 7.9E-75 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 63 80 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 80 99 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 186 203 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 112 134 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 2 14 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_17470 ca9f2383bace558de6cf8796b11b6baf 213 PRINTS PR01398 Isochorismatase signature 168 186 4.1E-46 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 SUPERFAMILY SSF51569 2 303 6.7E-66 T 12-10-2018 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 Pfam PF00701 Dihydrodipicolinate synthetase family 5 301 8.1E-42 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 9.0E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 9.0E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 9.0E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 SMART SM01130 4 303 4.6E-66 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 Gene3D G3DSA:3.20.20.70 2 304 1.0E-65 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_08680 75f3783f087579f5e7ac9159201e11a4 314 PIRSF PIRSF001365 1 312 3.2E-65 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 2.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 Gene3D G3DSA:1.10.357.10 52 183 3.1E-27 T 12-10-2018 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 SUPERFAMILY SSF46689 3 74 1.18E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 Gene3D G3DSA:1.10.10.60 5 51 2.4E-18 T 12-10-2018 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_25960 dfd0b3827b766f51146a16611df561d2 188 SUPERFAMILY SSF48498 78 183 8.18E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_30600 8317a26a17cb78a640734f04808241f7 701 Gene3D G3DSA:3.10.20.30 375 445 2.9E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_30600 8317a26a17cb78a640734f04808241f7 701 SMART SM00471 47 157 2.4E-10 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_30600 8317a26a17cb78a640734f04808241f7 701 Pfam PF13328 HD domain 32 178 1.8E-37 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_30600 8317a26a17cb78a640734f04808241f7 701 Pfam PF02824 TGS domain 381 440 7.5E-16 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 SUPERFAMILY SSF109604 16 194 9.42E-60 T 12-10-2018 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 SUPERFAMILY SSF81271 381 440 5.23E-14 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 SUPERFAMILY SSF81301 201 354 2.29E-18 T 12-10-2018 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 Gene3D G3DSA:3.30.460.10 197 325 1.4E-6 T 12-10-2018 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 SMART SM00954 235 345 7.7E-6 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 ABD1_30600 8317a26a17cb78a640734f04808241f7 701 Gene3D G3DSA:1.10.3210.10 3 194 5.1E-65 T 12-10-2018 ABD1_31450 f5c6a50cfbe3e715cc0f98b62edca7bb 183 SUPERFAMILY SSF46689 6 72 7.18E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31450 f5c6a50cfbe3e715cc0f98b62edca7bb 183 Gene3D G3DSA:1.10.357.10 4 181 1.6E-23 T 12-10-2018 ABD1_31450 f5c6a50cfbe3e715cc0f98b62edca7bb 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 1.7E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_31450 f5c6a50cfbe3e715cc0f98b62edca7bb 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_31450 f5c6a50cfbe3e715cc0f98b62edca7bb 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 Gene3D G3DSA:3.30.230.10 1 121 2.5E-34 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 117 16.132 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 Pfam PF00825 Ribonuclease P 7 114 1.3E-24 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 SUPERFAMILY SSF54211 5 120 1.74E-25 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 117 6.0E-21 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABD1_33980 e625600f94eca375c23cab4d07b06f23 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 109 6.0E-37 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABD1_30400 831b64c4e701db58fdcb16f0d4177c91 286 SUPERFAMILY SSF103481 186 283 2.62E-12 T 12-10-2018 ABD1_30400 831b64c4e701db58fdcb16f0d4177c91 286 Pfam PF00892 EamA-like transporter family 147 278 1.4E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 Gene3D G3DSA:1.20.1050.90 116 294 7.1E-76 T 12-10-2018 ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 337 2.7E-24 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 Gene3D G3DSA:3.40.50.300 6 329 7.1E-76 T 12-10-2018 ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 79.004 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 6.6E-84 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ABD1_00030 3a46a8a6c01e16d27ded88fbe6086a06 360 SUPERFAMILY SSF52540 1 334 1.42E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 Gene3D G3DSA:3.40.50.1370 4 133 1.9E-112 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.9E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.9E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.9E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 1.9E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 1.9E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 2.0E-49 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 1.1E-116 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 SUPERFAMILY SSF53671 2 301 1.23E-103 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 Gene3D G3DSA:3.40.50.1370 134 295 1.9E-112 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 5.5E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.5E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 5.5E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.5E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 1.7E-51 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABD1_20060 b86d71d175ea8de838b8da6b7e064244 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 80.117 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 Gene3D G3DSA:3.40.50.720 2 253 9.5E-70 T 12-10-2018 ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 SUPERFAMILY SSF51735 8 252 9.8E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 2.0E-58 T 12-10-2018 ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09010 241186f3113bac5f197aac1fe225f67a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_12170 80db3f2719d1a09e376812016f459420 368 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 275 364 1.1E-20 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABD1_12170 80db3f2719d1a09e376812016f459420 368 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site ABD1_12170 80db3f2719d1a09e376812016f459420 368 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 1.0E-19 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABD1_12170 80db3f2719d1a09e376812016f459420 368 Gene3D G3DSA:3.40.47.10 2 211 4.9E-55 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_12170 80db3f2719d1a09e376812016f459420 368 SUPERFAMILY SSF53901 2 364 1.27E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_12170 80db3f2719d1a09e376812016f459420 368 Gene3D G3DSA:3.40.47.10 213 366 8.6E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.2E-158 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 Hamap MF_00970 Ribonuclease E [rne]. 1 1096 35.626 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 Pfam PF00575 S1 RNA binding domain 36 116 4.4E-10 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 SMART SM00316 37 117 8.8E-9 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 Pfam PF10150 Ribonuclease E/G family 119 388 3.4E-94 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 Gene3D G3DSA:3.40.1260.20 399 504 1.9E-30 T 12-10-2018 ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 SUPERFAMILY SSF50249 40 123 1.96E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_03710 2f46836c4f4efdc5d9d54955de122e6e 1110 Gene3D G3DSA:2.40.50.140 31 123 2.7E-28 T 12-10-2018 ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 151 2.3E-14 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 SUPERFAMILY SSF160246 6 147 1.05E-29 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 Gene3D G3DSA:3.30.450.90 157 292 7.8E-48 T 12-10-2018 ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 SUPERFAMILY SSF52540 182 568 6.15E-99 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 569 3.7E-260 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 Gene3D G3DSA:3.40.50.300 295 570 2.1E-104 T 12-10-2018 ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_03050 40b30c90e4019e06ff1e2da2d36f33f1 570 Pfam PF00437 Type II/IV secretion system protein 193 459 2.4E-90 T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_08600 cbe8255c63e2b33dd68ae43742952da1 710 Pfam PF13148 Protein of unknown function (DUF3987) 242 618 7.9E-73 T 12-10-2018 IPR025048 Protein of unknown function DUF3987) ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 1.2E-13 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF47917 384 512 7.85E-46 T 12-10-2018 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.709 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF50615 11 95 3.4E-27 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 2.4E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 5.1E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF52540 97 382 1.76E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_01550 3f81b6b773414227672dccac6b04075d 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 7.7E-249 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:1.20.150.20 384 514 3.3E-46 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:3.40.50.300 95 383 2.5E-129 T 12-10-2018 ABD1_01550 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:2.40.30.20 2 94 6.2E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 PIRSF PIRSF001549 1 428 5.5E-125 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 Pfam PF13393 Histidyl-tRNA synthetase 9 316 9.0E-45 T 12-10-2018 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 Gene3D G3DSA:3.30.930.10 2 327 7.1E-111 T 12-10-2018 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 Pfam PF03129 Anticodon binding domain 346 426 2.2E-12 T 12-10-2018 IPR004154 Anticodon-binding ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 430 32.22 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 3.3E-148 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 Gene3D G3DSA:3.40.50.800 329 427 2.6E-27 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 SUPERFAMILY SSF52954 343 427 2.62E-16 T 12-10-2018 ABD1_04740 3d8b09c97123c28c42183dc6c1831b09 430 SUPERFAMILY SSF55681 7 324 6.17E-97 T 12-10-2018 ABD1_13420 a7d73954550d8ddb02f7510f8d5165e0 490 Gene3D G3DSA:1.20.1740.10 1 429 2.9E-62 T 12-10-2018 ABD1_13420 a7d73954550d8ddb02f7510f8d5165e0 490 Pfam PF13520 Amino acid permease 4 434 3.0E-40 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_13420 a7d73954550d8ddb02f7510f8d5165e0 490 PIRSF PIRSF006060 390 483 200.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_13420 a7d73954550d8ddb02f7510f8d5165e0 490 PIRSF PIRSF006060 1 420 9.2E-62 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SMART SM00357 52 118 5.8E-19 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SMART SM00382 170 355 3.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SMART SM00959 5 47 8.6E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.8E-211 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SUPERFAMILY SSF52540 90 370 4.85E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Gene3D G3DSA:3.40.50.300 130 417 1.2E-128 T 12-10-2018 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.189 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 12-10-2018 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.2E-23 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily ABD1_06110 3169a1512cfe7c5827fdd29a909b3a93 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 12-10-2018 ABD1_10810 e708d3656356b8d49af35508d888f661 220 Gene3D G3DSA:3.30.420.10 14 211 6.4E-46 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_10810 e708d3656356b8d49af35508d888f661 220 SMART SM00479 22 210 3.0E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_10810 e708d3656356b8d49af35508d888f661 220 SUPERFAMILY SSF53098 13 209 5.81E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_10810 e708d3656356b8d49af35508d888f661 220 Pfam PF00929 Exonuclease 24 201 1.1E-31 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_10810 e708d3656356b8d49af35508d888f661 220 Hamap MF_00157 Ribonuclease T [rnt]. 1 220 90.188 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ABD1_10810 e708d3656356b8d49af35508d888f661 220 TIGRFAM TIGR01298 RNaseT: ribonuclease T 15 208 6.9E-83 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ABD1_25590 ae49f257e61a4748d559702b52dd38ac 208 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 185 5.5E-70 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ABD1_25590 ae49f257e61a4748d559702b52dd38ac 208 Gene3D G3DSA:3.40.50.170 1 204 9.4E-78 T 12-10-2018 ABD1_25590 ae49f257e61a4748d559702b52dd38ac 208 SUPERFAMILY SSF53328 1 198 1.44E-63 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_25590 ae49f257e61a4748d559702b52dd38ac 208 Pfam PF00551 Formyl transferase 1 176 1.4E-59 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_25590 ae49f257e61a4748d559702b52dd38ac 208 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 183 30.351 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ABD1_27590 184614c19d715e2af97535124fb13cb9 120 SMART SM00448 2 115 1.7E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_27590 184614c19d715e2af97535124fb13cb9 120 SUPERFAMILY SSF52172 1 120 1.2E-37 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_27590 184614c19d715e2af97535124fb13cb9 120 Gene3D G3DSA:3.40.50.12740 1 120 3.8E-42 T 12-10-2018 ABD1_27590 184614c19d715e2af97535124fb13cb9 120 Pfam PF00072 Response regulator receiver domain 4 115 9.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 PIRSF PIRSF001434 1 425 7.8E-138 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 Gene3D G3DSA:3.90.1150.10 291 425 7.6E-55 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 SUPERFAMILY SSF53383 4 422 1.32E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 3.1E-147 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 Gene3D G3DSA:3.40.640.10 4 287 2.6E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_31050 3797fdbdd44ae9e5bc96d1e84a884b54 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 5.7E-202 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Pfam PF01037 Lrp/AsnC ligand binding domain 78 151 1.4E-27 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SUPERFAMILY SSF54909 76 156 1.88E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 7.3E-19 T 12-10-2018 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SUPERFAMILY SSF46785 10 71 1.5E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Gene3D G3DSA:3.30.70.920 66 149 5.1E-28 T 12-10-2018 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Gene3D G3DSA:1.10.10.10 5 65 1.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 3.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 3.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 3.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_20840 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SMART SM00344 12 121 9.0E-47 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_14960 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:1.10.10.200 1 81 7.8E-35 T 12-10-2018 IPR017856 Integrase-like, N-terminal ABD1_14960 fb08af057b57e54445f852f93c682786 249 SUPERFAMILY SSF75625 3 246 6.41E-93 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14960 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:3.30.70.980 85 236 7.0E-53 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14960 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:3.30.70.980 130 204 7.0E-53 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14960 fb08af057b57e54445f852f93c682786 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.9E-96 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14960 fb08af057b57e54445f852f93c682786 249 Pfam PF01709 Transcriptional regulator 5 237 4.2E-92 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14960 fb08af057b57e54445f852f93c682786 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.052 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_12800 453a534ababf391a284566e1c64afedb 434 Gene3D G3DSA:1.20.1250.20 18 429 4.8E-71 T 12-10-2018 ABD1_12800 453a534ababf391a284566e1c64afedb 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_12800 453a534ababf391a284566e1c64afedb 434 SUPERFAMILY SSF103473 10 430 1.01E-78 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_12800 453a534ababf391a284566e1c64afedb 434 Pfam PF07690 Major Facilitator Superfamily 28 348 3.9E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 Pfam PF03466 LysR substrate binding domain 91 294 2.5E-31 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 Gene3D G3DSA:3.40.190.290 94 295 2.2E-33 T 12-10-2018 ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.7E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 SUPERFAMILY SSF53850 94 294 1.63E-32 T 12-10-2018 ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 SUPERFAMILY SSF46785 1 113 1.69E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33550 0ed10b0f02a6294fc082a806749b3f3e 296 Gene3D G3DSA:1.10.10.10 4 89 1.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 SUPERFAMILY SSF69279 26 204 1.47E-41 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Gene3D G3DSA:2.30.110.50 32 382 1.2E-45 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Pfam PF05954 Phage late control gene D protein (GPD) 44 386 6.4E-62 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 SUPERFAMILY SSF69255 443 536 1.36E-23 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 592 2.0E-58 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Gene3D G3DSA:2.40.50.230 433 542 2.0E-30 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Gene3D G3DSA:3.55.50.10 112 222 1.2E-45 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 699 845 1.3E-42 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 566 672 1.2E-37 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 Gene3D G3DSA:3.30.1920.30 255 337 1.2E-45 T 12-10-2018 ABD1_13160 d7983f4a34ebccb0fc7cca297e5e8ecb 876 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 590 1.2E-67 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Gene3D G3DSA:1.10.150.120 101 174 6.3E-33 T 12-10-2018 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 SUPERFAMILY SSF47741 106 214 3.66E-33 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 205 369 8.8E-47 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Gene3D G3DSA:3.30.390.50 379 481 1.7E-26 T 12-10-2018 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 SUPERFAMILY SSF56176 195 369 5.45E-49 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Pfam PF01799 [2Fe-2S] binding domain 90 168 1.2E-30 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Gene3D G3DSA:3.10.20.30 2 96 7.8E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 380 480 4.0E-29 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 SUPERFAMILY SSF54292 11 95 5.99E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Gene3D G3DSA:3.30.43.10 207 256 1.8E-18 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 Gene3D G3DSA:3.30.465.10 257 369 9.1E-30 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 PIRSF PIRSF036557 3 493 8.1E-193 T 12-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 SUPERFAMILY SSF55447 377 480 1.19E-30 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 480 8.7E-200 T 12-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 ABD1_23600 71afd0a6d6e65d4241cac4ef2b578482 499 SMART SM01092 379 481 7.0E-32 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 Gene3D G3DSA:2.170.130.10 39 180 8.2E-44 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 754 1.3E-69 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 SUPERFAMILY SSF56935 46 754 2.53E-126 T 12-10-2018 ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 Pfam PF00593 TonB dependent receptor 293 753 1.0E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 Gene3D G3DSA:2.40.170.20 186 754 8.0E-183 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 737 754 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site ABD1_09340 5eaa949c3fdcf8b1a88f6de117df9a07 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 175 2.5E-28 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 83 7.8E-7 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 PIRSF PIRSF006487 90 233 22.0 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 PIRSF PIRSF006487 3 141 2.1E-6 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 115 179 8.7E-22 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 Gene3D G3DSA:3.30.70.1400 9 92 2.1E-20 T 12-10-2018 ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 SUPERFAMILY SSF103025 8 167 4.71E-34 T 12-10-2018 ABD1_27690 b9d6cf51d7a7ee42fecc653e098c042c 240 Gene3D G3DSA:2.40.30.160 124 228 9.3E-20 T 12-10-2018 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 SUPERFAMILY SSF53383 1 397 4.46E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 Gene3D G3DSA:3.40.640.10 60 301 5.9E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 Pfam PF00155 Aminotransferase class I and II 27 391 4.8E-82 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.3E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.3E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.3E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.3E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ABD1_00740 d4827e1a92958ac686b45cfbdb3304fc 404 Gene3D G3DSA:3.90.1150.10 11 392 5.9E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 SUPERFAMILY SSF51161 2 256 7.21E-73 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Gene3D G3DSA:1.10.166.10 1 70 1.4E-28 T 12-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 8.0E-25 T 12-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 3.0E-147 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Gene3D G3DSA:2.160.10.10 87 257 3.7E-55 T 12-10-2018 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_25250 ce3922907fa79d3f580de99360cd621a 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.401 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 Gene3D G3DSA:3.40.190.10 94 291 1.1E-51 T 12-10-2018 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 Gene3D G3DSA:1.10.10.10 1 93 1.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 Pfam PF03466 LysR substrate binding domain 89 290 2.5E-35 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 Gene3D G3DSA:3.40.190.10 163 267 1.1E-51 T 12-10-2018 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 SUPERFAMILY SSF53850 91 292 9.77E-34 T 12-10-2018 ABD1_03780 5ac35e377b5be288f89d58f0c617e715 299 SUPERFAMILY SSF46785 1 86 4.24E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 SUPERFAMILY SSF46689 7 74 2.05E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 SUPERFAMILY SSF48498 75 154 4.51E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 Gene3D G3DSA:1.10.357.10 2 180 2.8E-32 T 12-10-2018 ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_06700 6394b104dc698ca6ab833e193744e7f9 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 2.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_13010 3ddfa0bf9859b7547d4d76993d60bbcf 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 142 2.8E-12 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase ABD1_13010 3ddfa0bf9859b7547d4d76993d60bbcf 143 SUPERFAMILY SSF55961 3 142 4.77E-21 T 12-10-2018 ABD1_13010 3ddfa0bf9859b7547d4d76993d60bbcf 143 Gene3D G3DSA:3.30.530.20 5 143 9.1E-16 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_01490 68ce00e78b84ff080af15e7ccb44e336 279 Gene3D G3DSA:3.40.50.1980 173 276 3.1E-9 T 12-10-2018 ABD1_01490 68ce00e78b84ff080af15e7ccb44e336 279 Gene3D G3DSA:3.40.50.1980 22 172 5.5E-23 T 12-10-2018 ABD1_01490 68ce00e78b84ff080af15e7ccb44e336 279 SUPERFAMILY SSF53807 22 265 2.35E-39 T 12-10-2018 ABD1_01490 68ce00e78b84ff080af15e7ccb44e336 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 219 3.0E-24 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 Pfam PF03466 LysR substrate binding domain 97 297 5.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 Gene3D G3DSA:1.10.10.10 5 89 1.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 SUPERFAMILY SSF46785 7 81 4.35E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 61 4.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 SUPERFAMILY SSF53850 98 295 1.99E-25 T 12-10-2018 ABD1_14310 c56a3a44956fabd408f9f639a414c768 305 Gene3D G3DSA:3.40.190.290 98 302 6.6E-34 T 12-10-2018 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 Pfam PF00970 Oxidoreductase FAD-binding domain 20 94 1.9E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 3.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 3.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 3.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 4.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 4.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 4.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 4.4E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 SUPERFAMILY SSF63380 7 101 5.91E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 Gene3D G3DSA:3.40.50.80 99 253 1.0E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 SUPERFAMILY SSF52343 109 251 4.71E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 1.4E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_07210 9416d99dec23fe22e7b3c8d3bebf12cb 253 Gene3D G3DSA:2.40.30.10 1 97 9.2E-30 T 12-10-2018 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 SMART SM00382 163 343 5.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_19520 6a336f6534ace763cbd470457ae23496 368 SMART SM00962 164 365 5.5E-123 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 Gene3D G3DSA:3.40.50.300 162 353 7.6E-116 T 12-10-2018 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 Pfam PF00448 SRP54-type protein, GTPase domain 165 364 1.2E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 Gene3D G3DSA:1.20.120.140 65 363 7.6E-116 T 12-10-2018 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 93 364 1.5E-107 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 92 365 60.139 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 SMART SM00963 68 149 1.2E-24 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 Pfam PF02881 SRP54-type protein, helical bundle domain 83 145 7.2E-11 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 SUPERFAMILY SSF47364 63 143 9.68E-20 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 ABD1_19520 6a336f6534ace763cbd470457ae23496 368 SUPERFAMILY SSF52540 162 365 9.45E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_19520 6a336f6534ace763cbd470457ae23496 368 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 338 351 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABD1_21790 bfcf0a6f777e9b0101086d4372e9539f 335 SUPERFAMILY SSF46785 14 56 1.52E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_21790 bfcf0a6f777e9b0101086d4372e9539f 335 Pfam PF13280 WYL domain 158 329 4.4E-24 T 12-10-2018 IPR026881 WYL domain ABD1_03450 df677e79ba2270b8001436334946e969 519 Pfam PF00795 Carbon-nitrogen hydrolase 228 476 5.1E-30 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABD1_03450 df677e79ba2270b8001436334946e969 519 Gene3D G3DSA:3.60.110.10 224 481 3.2E-13 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_03450 df677e79ba2270b8001436334946e969 519 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 73 458 1.9E-94 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 ABD1_03450 df677e79ba2270b8001436334946e969 519 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 496 22.436 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 ABD1_03450 df677e79ba2270b8001436334946e969 519 SUPERFAMILY SSF56317 224 489 1.57E-44 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_07840 ccf3ca71dc75d733815cbc500f575b72 98 SUPERFAMILY SSF50715 6 97 7.32E-27 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_07840 ccf3ca71dc75d733815cbc500f575b72 98 Gene3D G3DSA:2.40.240.10 3 98 6.4E-30 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_07840 ccf3ca71dc75d733815cbc500f575b72 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 7.0E-39 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABD1_07840 ccf3ca71dc75d733815cbc500f575b72 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.91 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABD1_07840 ccf3ca71dc75d733815cbc500f575b72 98 Pfam PF01386 Ribosomal L25p family 6 95 5.5E-26 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABD1_11160 7e909592be28b9c53b4c76ee57db5f93 188 SUPERFAMILY SSF53098 2 187 4.4E-68 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_11160 7e909592be28b9c53b4c76ee57db5f93 188 Gene3D G3DSA:3.30.420.10 1 187 1.0E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_11160 7e909592be28b9c53b4c76ee57db5f93 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 37.252 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 ABD1_11160 7e909592be28b9c53b4c76ee57db5f93 188 Pfam PF01351 Ribonuclease HII 4 181 1.2E-40 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain ABD1_30450 958f47afc35ed9b1f4453477962a56a1 324 Gene3D G3DSA:3.40.50.1820 36 324 3.9E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_30450 958f47afc35ed9b1f4453477962a56a1 324 SUPERFAMILY SSF53474 39 295 1.44E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_30450 958f47afc35ed9b1f4453477962a56a1 324 Pfam PF00561 alpha/beta hydrolase fold 43 292 9.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 Gene3D G3DSA:3.40.50.720 1 138 1.2E-59 T 12-10-2018 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 SMART SM00859 2 122 1.3E-27 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 9.4E-196 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 SUPERFAMILY SSF55347 134 354 3.57E-76 T 12-10-2018 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 SUPERFAMILY SSF51735 1 147 1.15E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 PIRSF PIRSF000148 1 371 2.8E-66 T 12-10-2018 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.236 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 353 5.4E-56 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 Gene3D G3DSA:3.30.360.10 139 350 2.4E-80 T 12-10-2018 ABD1_03980 b7c9b54540b76ed169dec20351a6ea89 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 1.7E-23 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 SUPERFAMILY SSF53448 13 235 1.6E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 Gene3D G3DSA:3.90.550.10 6 237 1.1E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 234 4.3E-67 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 235 1.7E-63 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 12 234 39.472 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABD1_19140 3bfa05177463f6214de2c24d78bfb228 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 110 117 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.970 6 328 5.1E-132 T 12-10-2018 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 661 2.0E-296 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52922 534 661 6.71E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 SMART SM00861 357 527 2.2E-71 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 2.9E-10 T 12-10-2018 IPR033248 Transketolase, C-terminal domain ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52518 338 527 8.34E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.970 329 539 8.9E-86 T 12-10-2018 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 6.0E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 3.6E-164 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.920 540 661 2.8E-36 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_15290 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52518 7 322 4.49E-120 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Gene3D G3DSA:3.30.2130.10 258 423 7.4E-61 T 12-10-2018 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF55021 340 416 2.41E-25 T 12-10-2018 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF00696 Amino acid kinase family 3 229 3.1E-51 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF01842 ACT domain 279 336 1.7E-11 T 12-10-2018 IPR002912 ACT domain ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF53633 4 254 1.44E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 414 1.1E-112 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 5.4E-131 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF13840 ACT domain 348 410 2.7E-18 T 12-10-2018 IPR027795 CASTOR, ACT domain ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF55021 260 338 1.55E-17 T 12-10-2018 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Gene3D G3DSA:3.40.1160.10 1 257 1.5E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 PIRSF PIRSF000726 1 62 1.3E-20 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_11180 f6a7f8d5a44cbc4c9a8447879c2b2997 426 PIRSF PIRSF000726 55 422 4.1E-139 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 SUPERFAMILY SSF47323 330 471 3.01E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 Gene3D G3DSA:1.20.120.640 311 472 2.6E-42 T 12-10-2018 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 SMART SM00840 349 411 9.0E-21 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 Gene3D G3DSA:3.40.50.620 1 309 3.4E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 Pfam PF09190 DALR domain 349 411 7.2E-20 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 SUPERFAMILY SSF52374 6 316 2.3E-97 T 12-10-2018 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 8.7E-31 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 8.7E-31 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 8.7E-31 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 8.7E-31 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 3.0E-178 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.5 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABD1_12580 640e03bd5d6a4f430e21562c75a5f3c0 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 1.0E-132 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 SUPERFAMILY SSF53720 4 473 1.57E-154 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 Gene3D G3DSA:3.40.309.10 253 441 6.1E-161 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 Gene3D G3DSA:3.40.605.10 10 469 6.1E-161 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 Pfam PF00171 Aldehyde dehydrogenase family 15 471 9.5E-156 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_11020 b2e9662059dd8bd84fac21113312e05d 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_30680 d304b275913f4a8275a63425dcf2f113 312 Gene3D G3DSA:3.10.310.50 41 181 2.8E-47 T 12-10-2018 ABD1_30680 d304b275913f4a8275a63425dcf2f113 312 Pfam PF04536 TPM domain 52 175 1.2E-38 T 12-10-2018 IPR007621 TPM domain ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Gene3D G3DSA:1.10.150.20 165 228 3.9E-19 T 12-10-2018 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Pfam PF11798 IMS family HHH motif 168 194 7.5E-7 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 345 2.1E-13 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Pfam PF00817 impB/mucB/samB family 7 153 1.2E-51 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Gene3D G3DSA:3.30.1490.100 239 346 3.6E-19 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 SUPERFAMILY SSF100879 237 336 6.08E-21 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Gene3D G3DSA:2.30.40.20 21 72 1.4E-63 T 12-10-2018 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 SUPERFAMILY SSF56672 1 233 2.94E-92 T 12-10-2018 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 37.23 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ABD1_01840 06ca7e2451f6b80b24fbd53a0c33f43a 351 Gene3D G3DSA:3.30.70.270 4 163 1.4E-63 T 12-10-2018 ABD1_07120 981c671652da48cdc212b616ed32d125 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 161 1.7E-32 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07120 981c671652da48cdc212b616ed32d125 173 Gene3D G3DSA:1.20.120.1200 1 163 1.6E-44 T 12-10-2018 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Pfam PF01627 Hpt domain 833 909 3.0E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SUPERFAMILY SSF47226 769 891 2.09E-17 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Gene3D G3DSA:3.30.565.10 354 528 1.5E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.7E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.7E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.7E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SMART SM00387 402 523 1.4E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SUPERFAMILY SSF47384 275 356 1.73E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SUPERFAMILY SSF55874 344 518 5.63E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Gene3D G3DSA:1.20.120.160 810 932 4.8E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 521 3.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SMART SM00073 823 924 0.0029 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Pfam PF00072 Response regulator receiver domain 665 786 9.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SMART SM00448 663 786 2.5E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SUPERFAMILY SSF52172 661 830 1.29E-33 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Gene3D G3DSA:1.10.287.130 252 353 7.6E-27 T 12-10-2018 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Gene3D G3DSA:3.40.50.2300 648 796 3.7E-38 T 12-10-2018 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 SMART SM00388 289 355 1.8E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_05810 36e54874ec9a09f6d3777c3e9ab8011e 935 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 355 4.3E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_08820 bad0661d18a2b20d445091f6f37e653f 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 508 2.4E-146 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_08820 bad0661d18a2b20d445091f6f37e653f 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 508 7.1E-167 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_08820 bad0661d18a2b20d445091f6f37e653f 540 ProSitePatterns PS01303 BCCT family of transporters signature. 322 331 - T 12-10-2018 IPR018093 BCCT transporter, conserved site ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 83 103 2.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 23 41 2.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 52 75 2.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 2 17 2.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 PIRSF PIRSF039144 1 112 6.8E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 Gene3D G3DSA:3.30.70.120 1 112 9.6E-47 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ABD1_02040 22469da245ee0ac210dcf1e38fbd14d0 112 SMART SM00938 4 105 2.5E-66 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 871 889 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 625 760 2.6E-36 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 765 902 1.01E-21 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 745 763 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 740 761 6.9E-5 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 74 95 6.9E-5 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 754 772 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 649 822 8.63E-26 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 913 1074 1.02E-15 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 853 871 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR00313 NodO calcium binding signature 216 227 3.6E-10 T 12-10-2018 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR00313 NodO calcium binding signature 228 236 3.6E-10 T 12-10-2018 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR00313 NodO calcium binding signature 362 370 3.6E-10 T 12-10-2018 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 PRINTS PR00313 NodO calcium binding signature 740 749 3.6E-10 T 12-10-2018 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 343 451 7.59E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 763 781 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 91 109 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 334 465 2.2E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 210 333 6.5E-28 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 55 188 5.5E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 830 935 3.4E-21 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 16 173 6.15E-10 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF55486 504 648 5.38E-19 T 12-10-2018 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 SUPERFAMILY SSF51120 184 328 2.88E-26 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:3.40.390.10 469 596 3.5E-11 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 862 880 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 963 981 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 224 242 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Gene3D G3DSA:2.150.10.10 936 1091 1.8E-20 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 958 974 0.035 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 95 110 0.013 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 227 242 0.013 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 282 19.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 361 377 0.0096 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 838 855 0.0094 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 856 873 4.7E-4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 758 774 0.007 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 975 991 0.4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 210 226 0.0033 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 875 890 14.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 739 756 0.0031 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 245 261 0.35 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_24060 72dd3a80401b8c8d4c3ffdd4acb5a4d6 1098 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 721 733 42.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 SUPERFAMILY SSF51621 6 514 4.08E-127 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 287 409 4.0E-12 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 142 275 7.8E-25 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 2 148 7.8E-8 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 415 534 8.3E-7 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 97 270 8.3E-25 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 316 396 2.1E-11 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 424 521 4.9E-11 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABD1_09620 3d373eacb3150cef592b1cfcbfece92a 534 Gene3D G3DSA:3.20.20.60 410 532 1.7E-18 T 12-10-2018 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 157 320 4.1E-126 T 12-10-2018 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Pfam PF06723 MreB/Mbl protein 13 337 1.4E-140 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 10 151 2.59E-36 T 12-10-2018 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 337 3.3E-146 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 153 337 4.05E-48 T 12-10-2018 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.90.640.10 189 262 4.1E-126 T 12-10-2018 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 3.2E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 3.2E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 3.2E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 3.2E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 3.2E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABD1_27280 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 14 330 4.1E-126 T 12-10-2018 ABD1_22650 b8d5e365ceff8c7234ee79f6840ed66e 210 Gene3D G3DSA:3.40.50.1820 1 209 1.9E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_22650 b8d5e365ceff8c7234ee79f6840ed66e 210 SUPERFAMILY SSF53474 3 207 1.1E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Gene3D G3DSA:1.10.285.10 400 462 3.4E-11 T 12-10-2018 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 PIRSF PIRSF000185 36 462 6.8E-116 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Gene3D G3DSA:3.40.50.10860 69 204 2.1E-173 T 12-10-2018 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 136 149 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 SUPERFAMILY SSF53223 21 210 6.08E-74 T 12-10-2018 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 SUPERFAMILY SSF51735 216 462 3.55E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 SMART SM00839 218 460 2.6E-90 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 128 142 2.7E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 249 269 2.7E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 386 397 2.7E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 207 229 2.7E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Gene3D G3DSA:3.40.50.720 223 387 2.1E-173 T 12-10-2018 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 71 198 1.5E-49 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 216 460 1.7E-87 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_09820 ae2f8e44ccdd52466d398486394bda1c 462 Gene3D G3DSA:1.10.285.10 22 398 2.1E-173 T 12-10-2018 ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 PRINTS PR00618 DksA/TraR zinc finger signature 153 165 8.7E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 PRINTS PR00618 DksA/TraR zinc finger signature 141 152 8.7E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 Gene3D G3DSA:1.20.120.910 48 177 2.7E-36 T 12-10-2018 ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 59 167 6.9E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 137 170 1.2E-11 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 SUPERFAMILY SSF109635 41 136 6.8E-35 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 SUPERFAMILY SSF57716 138 175 3.28E-10 T 12-10-2018 ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 141 165 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ABD1_02320 6c5538610d1772e072853fe47c96ee33 178 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 55 177 29.143 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 Pfam PF03466 LysR substrate binding domain 98 299 7.9E-30 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 3.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 Gene3D G3DSA:3.40.190.10 109 295 2.7E-43 T 12-10-2018 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 SUPERFAMILY SSF53850 98 300 8.51E-31 T 12-10-2018 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 Gene3D G3DSA:3.40.190.10 169 267 2.7E-43 T 12-10-2018 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 SUPERFAMILY SSF46785 9 120 2.52E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 Gene3D G3DSA:1.10.10.10 11 100 1.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09200 a2c4c71ca587903fb85b9dbd055f16d4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 Gene3D G3DSA:3.90.180.10 10 336 3.7E-92 T 12-10-2018 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 Pfam PF00107 Zinc-binding dehydrogenase 184 311 1.4E-26 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 SMART SM00829 10 350 0.0015 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 SUPERFAMILY SSF50129 1 181 6.54E-42 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 SUPERFAMILY SSF51735 148 316 3.04E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 Gene3D G3DSA:3.40.50.720 161 297 3.7E-92 T 12-10-2018 ABD1_16970 0b5366636daeb1089edb8c4d7af1d302 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 1.3E-22 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 SMART SM00344 3 112 2.7E-38 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 Gene3D G3DSA:3.30.70.920 53 147 4.3E-20 T 12-10-2018 ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 SUPERFAMILY SSF46785 3 62 2.52E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 6.3E-15 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 SUPERFAMILY SSF54909 65 147 1.88E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 Gene3D G3DSA:1.10.10.10 4 52 4.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19810 fd87ba967ea8d7bc758d7d774bc4259f 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.2E-18 T 12-10-2018 ABD1_30340 6b470fd1507f43d01d741140a9633a69 195 Gene3D G3DSA:3.40.50.360 1 193 7.2E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_30340 6b470fd1507f43d01d741140a9633a69 195 SUPERFAMILY SSF52218 1 193 2.39E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_30340 6b470fd1507f43d01d741140a9633a69 195 Pfam PF02525 Flavodoxin-like fold 3 188 1.4E-33 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 SUPERFAMILY SSF46689 214 258 9.68E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 Pfam PF12833 Helix-turn-helix domain 180 257 4.0E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 SUPERFAMILY SSF51182 26 186 2.18E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 SMART SM00342 174 256 3.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 Pfam PF02311 AraC-like ligand binding domain 21 140 1.6E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 Gene3D G3DSA:2.60.120.10 19 88 1.1E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 Gene3D G3DSA:1.10.10.60 158 260 1.7E-21 T 12-10-2018 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_09160 83323d4f5f992089c0fb139e2f2b0d2f 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 SMART SM00882 6 219 3.4E-81 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 Pfam PF01144 Coenzyme A transferase 8 218 4.1E-73 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 1.1E-121 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 SUPERFAMILY SSF100950 2 221 1.38E-79 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ABD1_18700 aefafc92c4f4f4ee15e8abfd43c036b7 223 Gene3D G3DSA:3.40.1080.10 1 218 6.3E-80 T 12-10-2018 ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 SMART SM00882 6 219 3.4E-81 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 Pfam PF01144 Coenzyme A transferase 8 218 4.1E-73 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 1.1E-121 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 SUPERFAMILY SSF100950 2 221 1.38E-79 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ABD1_19130 aefafc92c4f4f4ee15e8abfd43c036b7 223 Gene3D G3DSA:3.40.1080.10 1 218 6.3E-80 T 12-10-2018 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.90.600.10 329 428 7.5E-33 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 SMART SM01209 103 296 2.6E-140 T 12-10-2018 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.8E-85 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF56059 104 321 3.89E-66 T 12-10-2018 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.7E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.30.1490.20 122 190 2.9E-28 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF51246 328 423 1.65E-29 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 420 5.8E-27 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.30.470.20 191 328 9.1E-58 T 12-10-2018 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 SMART SM01210 329 422 6.0E-47 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.1E-175 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF52440 1 103 4.75E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.95 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_21860 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.40.50.20 2 95 7.6E-36 T 12-10-2018 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 2.9E-76 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 SMART SM00878 336 443 1.0E-53 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 6.2E-41 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Gene3D G3DSA:2.40.50.100 503 572 9.7E-19 T 12-10-2018 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Pfam PF00364 Biotin-requiring enzyme 513 571 7.8E-13 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 SUPERFAMILY SSF51230 502 571 4.97E-15 T 12-10-2018 IPR011053 Single hybrid motif ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 SUPERFAMILY SSF51246 331 446 2.35E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 8.6E-36 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 SUPERFAMILY SSF56059 84 342 1.1E-57 T 12-10-2018 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 529 546 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 Gene3D G3DSA:3.30.470.130 1 449 3.7E-176 T 12-10-2018 ABD1_12950 b1a1dd9f19019e57206e4f71ded2c41d 572 SUPERFAMILY SSF52440 3 114 5.54E-43 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_23950 5fd09d850ea219e786f45f3ceded86f5 315 PIRSF PIRSF007580 2 302 1.1E-74 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_23950 5fd09d850ea219e786f45f3ceded86f5 315 Pfam PF10118 Predicted metal-dependent hydrolase 11 282 8.6E-59 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 193 4.6E-4 T 12-10-2018 ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 SUPERFAMILY SSF51735 6 263 6.58E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 Pfam PF00106 short chain dehydrogenase 10 195 3.4E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 Gene3D G3DSA:3.40.50.720 1 268 2.5E-66 T 12-10-2018 ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_26880 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 PIRSF PIRSF016578 8 381 5.9E-16 T 12-10-2018 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 SUPERFAMILY SSF47203 228 379 5.8E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Gene3D G3DSA:1.20.140.10 235 381 4.8E-43 T 12-10-2018 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 9.8E-34 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.6E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 SUPERFAMILY SSF56645 4 241 2.23E-83 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Gene3D G3DSA:1.10.540.10 2 120 6.3E-36 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Gene3D G3DSA:2.40.110.10 121 234 9.6E-41 T 12-10-2018 ABD1_22770 9e8f1d79e2f7210a1d3eb341cfd947c1 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.2E-38 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_02890 3951a02e7b03de552ff96a2631092760 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 6.8E-53 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABD1_02890 3951a02e7b03de552ff96a2631092760 195 PIRSF PIRSF000847 4 195 1.3E-46 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABD1_02890 3951a02e7b03de552ff96a2631092760 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABD1_02890 3951a02e7b03de552ff96a2631092760 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 1.6E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABD1_02890 3951a02e7b03de552ff96a2631092760 195 Gene3D G3DSA:1.20.120.1760 5 188 2.1E-13 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.1E-5 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.1E-5 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.2E-10 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 4.2E-10 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 543 1.4E-12 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 SUPERFAMILY SSF46977 425 552 2.62E-36 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 Gene3D G3DSA:3.50.50.90 1 282 2.5E-75 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 Gene3D G3DSA:3.50.50.90 328 556 1.3E-52 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 PIRSF PIRSF000171 1 561 1.6E-231 T 12-10-2018 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 Pfam PF00890 FAD binding domain 9 378 3.8E-32 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_17100 a8046512a4d594d265e0ddc7dfaad593 577 SUPERFAMILY SSF51905 3 406 5.31E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Gene3D G3DSA:4.10.320.10 140 182 2.6E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 SUPERFAMILY SSF47005 200 243 5.75E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Gene3D G3DSA:4.10.320.10 204 244 2.8E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Gene3D G3DSA:3.30.559.10 252 492 3.7E-87 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 SUPERFAMILY SSF51230 1 77 1.57E-19 T 12-10-2018 IPR011053 Single hybrid motif ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 SUPERFAMILY SSF52777 263 493 1.29E-77 T 12-10-2018 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 SUPERFAMILY SSF47005 135 179 9.02E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Pfam PF00364 Biotin-requiring enzyme 1 62 1.5E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 14 43 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 267 493 1.5E-81 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Pfam PF02817 e3 binding domain 206 241 4.7E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Pfam PF02817 e3 binding domain 141 175 2.9E-10 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABD1_16940 6b00e36dd0dc313a847b2c8cdc80906f 494 Gene3D G3DSA:2.40.50.100 1 91 2.3E-22 T 12-10-2018 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:1.20.58.410 2 101 3.0E-5 T 12-10-2018 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 358 1.5E-162 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:3.30.70.1660 112 342 2.9E-95 T 12-10-2018 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 SUPERFAMILY SSF75620 12 353 4.32E-135 T 12-10-2018 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Pfam PF00472 RF-1 domain 213 321 2.6E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.391 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Pfam PF03462 PCRF domain 14 203 2.1E-73 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:3.30.160.20 210 297 2.9E-95 T 12-10-2018 ABD1_21510 f6611c215049920dbda6e23e7373736b 362 SMART SM00937 63 178 6.9E-66 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 420 2.7E-177 T 12-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 128 416 4.1E-57 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 Gene3D G3DSA:3.90.850.10 120 421 2.8E-128 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 SUPERFAMILY SSF56529 124 419 5.23E-104 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 SUPERFAMILY SSF63433 7 122 4.18E-36 T 12-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 Gene3D G3DSA:2.30.30.230 1 119 6.7E-40 T 12-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 ABD1_33150 42a9d894166d6c876a02c9339c5195d2 435 Pfam PF09298 Fumarylacetoacetase N-terminal 20 122 1.2E-31 T 12-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 ABD1_33350 b137b21de1a959272e450791024429c8 344 SMART SM00525 189 209 1.1E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 Pfam PF14815 NUDIX domain 233 340 2.3E-20 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 268 2.1E-107 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 ABD1_33350 b137b21de1a959272e450791024429c8 344 SUPERFAMILY SSF55811 218 340 2.1E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_33350 b137b21de1a959272e450791024429c8 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 Gene3D G3DSA:1.10.340.30 21 130 1.5E-83 T 12-10-2018 ABD1_33350 b137b21de1a959272e450791024429c8 344 Gene3D G3DSA:1.10.1670.10 9 209 1.5E-83 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 Gene3D G3DSA:3.90.79.10 223 344 7.3E-14 T 12-10-2018 ABD1_33350 b137b21de1a959272e450791024429c8 344 SUPERFAMILY SSF48150 6 223 5.65E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 Pfam PF00633 Helix-hairpin-helix motif 101 125 2.2E-6 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 SMART SM00478 39 188 2.3E-38 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABD1_33350 b137b21de1a959272e450791024429c8 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 8.3E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABD1_23170 da3b9029602688f98b9b0d81e32faba1 333 Gene3D G3DSA:1.10.8.350 43 209 9.2E-94 T 12-10-2018 ABD1_23170 da3b9029602688f98b9b0d81e32faba1 333 Pfam PF13406 Transglycosylase SLT domain 37 327 1.5E-87 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 ABD1_23170 da3b9029602688f98b9b0d81e32faba1 333 Gene3D G3DSA:1.10.530.10 76 327 9.2E-94 T 12-10-2018 ABD1_23170 da3b9029602688f98b9b0d81e32faba1 333 SUPERFAMILY SSF53955 24 331 7.12E-80 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_23170 da3b9029602688f98b9b0d81e32faba1 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 330 1.1E-92 T 12-10-2018 IPR011757 Lytic transglycosylase MltB ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 354 1.8E-36 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 365 34.351 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 1.4E-41 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 Gene3D G3DSA:3.40.50.2000 187 349 3.0E-46 T 12-10-2018 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 SUPERFAMILY SSF53756 10 364 3.14E-115 T 12-10-2018 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 Gene3D G3DSA:3.40.50.2000 9 186 1.5E-61 T 12-10-2018 ABD1_32320 2694b6827f2624c3cbcc6dacbe6f9e32 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 362 2.2E-105 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_28030 163709eabd40ec525cae463a106c21c9 209 Pfam PF03006 Haemolysin-III related 8 201 6.2E-34 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ABD1_28030 163709eabd40ec525cae463a106c21c9 209 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 208 4.2E-60 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 ABD1_33560 632744ceca3966f78080ff6a0a8e6a56 236 Pfam PF01925 Sulfite exporter TauE/SafE 2 233 9.9E-29 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF55874 279 445 2.1E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF47384 213 291 2.35E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF11808 Domain of unknown function (DUF3329) 27 106 2.8E-14 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF55785 125 169 1.06E-5 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF13188 PAS domain 119 164 7.5E-6 T 12-10-2018 IPR000014 PAS domain ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 SMART SM00387 335 447 6.7E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:1.10.287.130 223 290 1.6E-22 T 12-10-2018 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 SMART SM00388 224 290 3.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:3.30.450.20 107 222 3.2E-8 T 12-10-2018 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 6.2E-124 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 446 1.6E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 4.9E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_32780 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:3.30.565.10 292 449 1.3E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 69.815 T 12-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 1.7E-162 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 3.0E-41 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 1.5E-99 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 12-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 7.0E-25 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 2.1E-40 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 SUPERFAMILY SSF56762 221 595 1.7E-122 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Gene3D G3DSA:3.30.460.80 7 153 3.7E-35 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Gene3D G3DSA:1.10.645.20 210 595 1.2E-143 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 SUPERFAMILY SSF143243 22 225 2.09E-58 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.466 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07060 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 41.148 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 SUPERFAMILY SSF55048 138 203 8.5E-15 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 Gene3D G3DSA:3.30.70.250 134 207 1.3E-92 T 12-10-2018 ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 Pfam PF00698 Acyl transferase domain 17 291 9.6E-37 T 12-10-2018 IPR014043 Acyl transferase ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 9.3E-99 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 PIRSF PIRSF000446 12 321 2.3E-104 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 325 1.4E-38 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 SUPERFAMILY SSF52151 15 318 1.62E-70 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_07730 2322a7fba534b5f3c099f30efdc29876 328 Gene3D G3DSA:3.40.366.10 17 296 1.3E-92 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ABD1_31320 2e3ddbe478f0d1e79c9d57946b987d71 625 Pfam PF02705 K+ potassium transporter 15 546 3.3E-205 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 ABD1_31320 2e3ddbe478f0d1e79c9d57946b987d71 625 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 625 33.579 T 12-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup ABD1_27270 a55fb95f5d1492c00e042b9765afbba5 285 Pfam PF04085 rod shape-determining protein MreC 125 271 2.6E-37 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABD1_27270 a55fb95f5d1492c00e042b9765afbba5 285 Gene3D G3DSA:2.40.10.340 123 270 3.2E-36 T 12-10-2018 ABD1_27270 a55fb95f5d1492c00e042b9765afbba5 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 276 1.7E-48 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABD1_27270 a55fb95f5d1492c00e042b9765afbba5 285 Gene3D G3DSA:2.40.10.350 182 259 3.2E-36 T 12-10-2018 ABD1_27270 a55fb95f5d1492c00e042b9765afbba5 285 PIRSF PIRSF038471 3 285 3.0E-64 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABD1_24900 5feff2cfc026af43e4cd53dffde3b3af 314 SUPERFAMILY SSF103481 196 283 7.06E-7 T 12-10-2018 ABD1_24900 5feff2cfc026af43e4cd53dffde3b3af 314 SUPERFAMILY SSF103481 36 139 8.11E-9 T 12-10-2018 ABD1_24900 5feff2cfc026af43e4cd53dffde3b3af 314 TIGRFAM TIGR00688 rarD: protein RarD 3 255 7.4E-55 T 12-10-2018 IPR004626 RarD protein GO:0005887 ABD1_24900 5feff2cfc026af43e4cd53dffde3b3af 314 Pfam PF00892 EamA-like transporter family 3 139 1.1E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Pfam PF14698 Argininosuccinate lyase C-terminal 379 448 1.2E-25 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.6E-31 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 2.6E-31 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 2.6E-31 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00149 Fumarate lyase superfamily signature 247 274 2.6E-31 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Gene3D G3DSA:1.20.200.10 135 465 4.1E-193 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 209 225 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 158 178 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 291 307 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 117 139 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 326 345 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 PRINTS PR00145 Argininosuccinate lyase family signature 247 271 2.4E-68 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Pfam PF00206 Lyase 22 316 3.0E-79 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Gene3D G3DSA:1.10.40.30 376 449 4.1E-193 T 12-10-2018 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Hamap MF_00006 Argininosuccinate lyase [argH]. 18 470 44.289 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 SUPERFAMILY SSF48557 19 472 3.93E-156 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 Gene3D G3DSA:1.10.275.10 41 245 4.1E-193 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_02420 809cd20fc5e8196ca001c8042f405664 477 TIGRFAM TIGR00838 argH: argininosuccinate lyase 19 472 1.8E-194 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABD1_13410 abe413303d78df8ab9be93829528a678 526 Gene3D G3DSA:3.40.605.10 44 519 1.1E-198 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_13410 abe413303d78df8ab9be93829528a678 526 SUPERFAMILY SSF53720 20 517 5.5E-96 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_13410 abe413303d78df8ab9be93829528a678 526 Gene3D G3DSA:3.40.309.10 267 454 1.1E-198 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_13410 abe413303d78df8ab9be93829528a678 526 Pfam PF00171 Aldehyde dehydrogenase family 26 457 1.6E-44 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_05480 93ebe490093adfa4f906d3624fdc0204 307 Gene3D G3DSA:3.40.50.720 32 307 3.7E-90 T 12-10-2018 ABD1_05480 93ebe490093adfa4f906d3624fdc0204 307 SUPERFAMILY SSF51735 95 273 2.66E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_05480 93ebe490093adfa4f906d3624fdc0204 307 Gene3D G3DSA:3.40.50.720 91 273 3.7E-90 T 12-10-2018 ABD1_05480 93ebe490093adfa4f906d3624fdc0204 307 SUPERFAMILY SSF52283 36 86 1.05E-5 T 12-10-2018 ABD1_05480 93ebe490093adfa4f906d3624fdc0204 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 272 4.6E-41 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 Gene3D G3DSA:3.40.50.1820 1 275 7.7E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 6.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 SUPERFAMILY SSF53474 1 276 2.52E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18580 363e25a3f6ab7ee5cfaa35ac4c165821 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 5.0E-26 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Gene3D G3DSA:3.30.460.100 518 769 9.1E-78 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Gene3D G3DSA:3.30.460.100 13 254 2.8E-59 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 762 7.3E-71 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 244 4.0E-61 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.317 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 SUPERFAMILY SSF81301 3 259 2.94E-67 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 SUPERFAMILY SSF81593 774 905 2.82E-30 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 SUPERFAMILY SSF81593 260 409 2.59E-40 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 5.9E-42 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 9.2E-10 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 SUPERFAMILY SSF81301 481 772 1.77E-77 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Gene3D G3DSA:1.20.120.330 770 907 6.6E-43 T 12-10-2018 ABD1_28490 1dd81907b7df70b006543370d26f831a 916 Gene3D G3DSA:1.20.120.330 258 413 5.2E-50 T 12-10-2018 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.8E-31 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 PIRSF PIRSF006092 1 158 4.4E-55 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 SUPERFAMILY SSF54534 82 157 8.11E-25 T 12-10-2018 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 Gene3D G3DSA:3.10.50.30 76 158 3.4E-32 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 3.3E-59 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 1.1E-29 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 SUPERFAMILY SSF46557 3 78 2.22E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.168 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ABD1_26390 4ba573ea82e1fe09bd32e31f945e67e2 158 Gene3D G3DSA:1.10.287.180 1 75 2.4E-31 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABD1_29720 01a4490b0a61e9192eb608dbbe2ee531 145 Pfam PF02082 Transcriptional regulator 1 81 6.2E-19 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type ABD1_29720 01a4490b0a61e9192eb608dbbe2ee531 145 Gene3D G3DSA:1.10.10.10 1 142 1.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_29720 01a4490b0a61e9192eb608dbbe2ee531 145 SUPERFAMILY SSF46785 2 131 2.98E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_29720 01a4490b0a61e9192eb608dbbe2ee531 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 4.4E-25 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type ABD1_06310 c168c3d3bbbc3fbb8c823d63584cc2b1 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 5.1E-18 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABD1_06310 c168c3d3bbbc3fbb8c823d63584cc2b1 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 3.9E-23 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABD1_06310 c168c3d3bbbc3fbb8c823d63584cc2b1 112 Gene3D G3DSA:3.30.160.100 1 109 4.2E-26 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABD1_06310 c168c3d3bbbc3fbb8c823d63584cc2b1 112 SUPERFAMILY SSF69754 1 102 1.57E-23 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABD1_24970 87011be1a7d7673f9bd2fee0e4fb6d3e 112 Gene3D G3DSA:2.170.150.70 1 111 8.6E-15 T 12-10-2018 ABD1_24970 87011be1a7d7673f9bd2fee0e4fb6d3e 112 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 109 3.0E-14 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ABD1_24970 87011be1a7d7673f9bd2fee0e4fb6d3e 112 SUPERFAMILY SSF51316 2 111 6.8E-30 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_09440 613004cdd07841250b9b1a8e18c782a1 196 Pfam PF05036 Sporulation related domain 115 174 3.4E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 ABD1_09440 613004cdd07841250b9b1a8e18c782a1 196 SUPERFAMILY SSF110997 114 188 9.81E-11 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_15490 d564335cf65557bb8463a9a18dc86e44 387 Pfam PF08007 Cupin superfamily protein 14 312 1.5E-85 T 12-10-2018 IPR003347 JmjC domain ABD1_15490 d564335cf65557bb8463a9a18dc86e44 387 SUPERFAMILY SSF51197 7 296 2.61E-62 T 12-10-2018 ABD1_15490 d564335cf65557bb8463a9a18dc86e44 387 SMART SM00558 81 228 5.1E-5 T 12-10-2018 IPR003347 JmjC domain ABD1_15490 d564335cf65557bb8463a9a18dc86e44 387 Gene3D G3DSA:2.60.120.650 1 213 1.0E-72 T 12-10-2018 ABD1_15490 d564335cf65557bb8463a9a18dc86e44 387 Gene3D G3DSA:1.10.10.2510 216 386 3.6E-14 T 12-10-2018 ABD1_07720 98ba8649ef93f2dd0e970e36fffcaf69 61 SUPERFAMILY SSF57829 2 54 1.22E-17 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABD1_07720 98ba8649ef93f2dd0e970e36fffcaf69 61 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-20 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_07720 98ba8649ef93f2dd0e970e36fffcaf69 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.561 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_07720 98ba8649ef93f2dd0e970e36fffcaf69 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 5.0E-20 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 Pfam PF02321 Outer membrane efflux protein 68 251 1.1E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 Pfam PF02321 Outer membrane efflux protein 281 459 2.6E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 SUPERFAMILY SSF56954 3 461 4.71E-92 T 12-10-2018 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 460 2.2E-86 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 Gene3D G3DSA:2.20.200.10 105 350 3.8E-106 T 12-10-2018 ABD1_05050 8c48389f1e3418eae111d6086d15feab 468 Gene3D G3DSA:1.20.1600.10 59 460 3.8E-106 T 12-10-2018 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88946 117 460 1.13E-93 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 626 44.43 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04545 Sigma-70, region 4 561 614 5.4E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.220.120 5 66 7.7E-26 T 12-10-2018 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04539 Sigma-70 region 3 472 547 1.0E-30 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 2.7E-122 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 5.0E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 5.0E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 5.0E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 5.0E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 5.0E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04546 Sigma-70, non-essential region 141 362 2.3E-53 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 5.4E-27 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 8.9E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88659 523 625 5.61E-27 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.10.10 466 542 7.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88659 466 539 1.57E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.601.10 115 462 1.4E-131 T 12-10-2018 ABD1_26640 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.10.10 543 627 4.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF13721 SecD export protein N-terminal TM region 2 102 8.7E-35 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 618 6.7E-134 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:1.20.1640.10 468 622 7.7E-13 T 12-10-2018 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.4E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 520 544 8.4E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 595 618 8.4E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 611 1.3E-71 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF02355 Protein export membrane protein 455 621 1.1E-18 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:3.30.1360.200 279 449 2.4E-47 T 12-10-2018 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 632 50.332 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:3.30.70.3400 221 455 2.4E-47 T 12-10-2018 ABD1_28570 35ffe4aea4e3fcef2605b6d0ec681375 633 SUPERFAMILY SSF82866 428 626 3.53E-45 T 12-10-2018 ABD1_26090 cd03f7c1fc97a9b0335b268dd0be8057 301 Gene3D G3DSA:3.40.50.620 21 271 2.4E-46 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_26090 cd03f7c1fc97a9b0335b268dd0be8057 301 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 55.535 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 ABD1_26090 cd03f7c1fc97a9b0335b268dd0be8057 301 Pfam PF01171 PP-loop family 49 212 2.7E-15 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ABD1_26090 cd03f7c1fc97a9b0335b268dd0be8057 301 SUPERFAMILY SSF52402 26 244 1.61E-54 T 12-10-2018 ABD1_26090 cd03f7c1fc97a9b0335b268dd0be8057 301 PIRSF PIRSF004976 5 289 4.4E-70 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:3.30.1360.30 275 423 1.3E-197 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF55681 118 586 4.98E-104 T 12-10-2018 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF55261 293 422 4.58E-44 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:2.40.50.140 1 107 2.2E-34 T 12-10-2018 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 6.0E-109 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.9E-242 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF02938 GAD domain 311 409 2.3E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.1E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.1E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.1E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.1E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:3.30.930.10 120 582 1.3E-197 T 12-10-2018 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.1E-17 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF50249 2 106 3.05E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_28370 2a71d9b26d4d505c11da9d4e6b17e820 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.448 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABD1_05930 e964c640c375250cfdff7d5916807c7e 283 Pfam PF03668 P-loop ATPase protein family 4 280 4.2E-86 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 ABD1_05930 e964c640c375250cfdff7d5916807c7e 283 Gene3D G3DSA:3.40.50.300 1 159 2.6E-5 T 12-10-2018 ABD1_05930 e964c640c375250cfdff7d5916807c7e 283 PIRSF PIRSF005052 2 283 6.2E-111 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 ABD1_05930 e964c640c375250cfdff7d5916807c7e 283 SUPERFAMILY SSF52540 3 157 6.82E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05930 e964c640c375250cfdff7d5916807c7e 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 38.305 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 8.1E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF00676 Dehydrogenase E1 component 212 515 3.1E-52 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.12470 556 802 2.6E-165 T 12-10-2018 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:1.10.287.1150 82 164 5.8E-26 T 12-10-2018 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 14 50 4.0E-14 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 SMART SM00861 593 786 3.7E-60 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 SUPERFAMILY SSF52518 119 546 4.21E-90 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 SUPERFAMILY SSF52518 575 793 3.83E-49 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 PIRSF PIRSF000157 1 937 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 935 1.3E-50 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.970 165 525 1.1E-148 T 12-10-2018 ABD1_26530 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.11610 723 932 2.6E-165 T 12-10-2018 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 SUPERFAMILY SSF100950 7 149 7.67E-44 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 32.895 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 SUPERFAMILY SSF75445 131 201 3.53E-23 T 12-10-2018 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 Gene3D G3DSA:3.30.70.260 127 198 2.1E-72 T 12-10-2018 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 5.0E-64 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 6.7E-59 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ABD1_19370 db82419941051960c55d35b8ac9ab13b 223 Gene3D G3DSA:3.40.50.1360 11 212 2.1E-72 T 12-10-2018 ABD1_15190 fdb81963637543637df903c2134decfe 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.4E-60 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.185 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ABD1_15190 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.2E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.2E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.2E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.2E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.2E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 2.9E-62 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABD1_15190 fdb81963637543637df903c2134decfe 181 Gene3D G3DSA:3.30.420.10 3 157 5.4E-51 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_15190 fdb81963637543637df903c2134decfe 181 SUPERFAMILY SSF53098 3 155 9.1E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_00650 b0bfb2805c5761a91ab72d5b18d83791 291 SUPERFAMILY SSF53448 3 281 8.56E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_00650 b0bfb2805c5761a91ab72d5b18d83791 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 267 8.0E-103 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ABD1_00650 b0bfb2805c5761a91ab72d5b18d83791 291 Gene3D G3DSA:3.90.550.10 1 290 3.0E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_00650 b0bfb2805c5761a91ab72d5b18d83791 291 Pfam PF00483 Nucleotidyl transferase 5 264 3.7E-22 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABD1_25830 ee35779b1744a144ceae00fc53b1c547 207 PIRSF PIRSF006324 1 207 1.2E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_25830 ee35779b1744a144ceae00fc53b1c547 207 Pfam PF01810 LysE type translocator 15 205 6.4E-34 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_24790 419652c6113ea260817f9b0f41fdcdd5 381 SUPERFAMILY SSF48452 33 115 2.2E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_24790 419652c6113ea260817f9b0f41fdcdd5 381 Gene3D G3DSA:1.25.40.10 23 137 1.5E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_25100 80ec4bce00287298a804ae2fa4eb4c0a 182 SUPERFAMILY SSF55729 6 167 3.73E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_25100 80ec4bce00287298a804ae2fa4eb4c0a 182 Gene3D G3DSA:3.40.630.30 4 173 1.5E-35 T 12-10-2018 ABD1_25100 80ec4bce00287298a804ae2fa4eb4c0a 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 157 4.6E-25 T 12-10-2018 IPR000182 GNAT domain ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Gene3D G3DSA:1.20.140.10 239 387 8.0E-46 T 12-10-2018 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 SUPERFAMILY SSF47203 231 385 1.48E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 SUPERFAMILY SSF56645 5 244 2.09E-79 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 385 5.2E-47 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Gene3D G3DSA:2.40.110.10 125 238 4.9E-41 T 12-10-2018 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Gene3D G3DSA:1.10.540.10 1 124 3.3E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 122 3.8E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_29010 84ab4b56888f60d110ff9d6d23b36140 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 221 1.6E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 SUPERFAMILY SSF51735 152 312 8.66E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 146 6.9E-27 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 Gene3D G3DSA:3.90.180.10 12 341 1.6E-133 T 12-10-2018 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 SMART SM00829 9 342 3.0E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 SUPERFAMILY SSF50129 12 176 1.67E-50 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 Pfam PF00107 Zinc-binding dehydrogenase 187 306 1.1E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_18140 ffcb31cad7ddc5ba459ec55119e272dd 350 Gene3D G3DSA:3.40.50.720 168 321 1.6E-133 T 12-10-2018 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 249 15.512 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 5.2E-38 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 5.2E-38 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 5.2E-38 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 19 46 5.2E-38 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 20 237 3.5E-63 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_04360 e2f123327557a9a99daeac089c2cdf80 256 Pfam PF00902 Sec-independent protein translocase protein (TatC) 23 232 2.2E-59 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABD1_19790 e3a5eb2e2d6c59fb6d4c361e564a98cb 468 Pfam PF00324 Amino acid permease 24 436 1.3E-87 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_19790 e3a5eb2e2d6c59fb6d4c361e564a98cb 468 Gene3D G3DSA:1.20.1740.10 14 466 3.2E-59 T 12-10-2018 ABD1_19790 e3a5eb2e2d6c59fb6d4c361e564a98cb 468 PIRSF PIRSF006060 5 467 3.8E-63 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_19790 e3a5eb2e2d6c59fb6d4c361e564a98cb 468 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_08360 ee6912465326902f15b9c56cae71df54 282 Pfam PF13230 Glutamine amidotransferases class-II 1 266 4.9E-121 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 ABD1_08360 ee6912465326902f15b9c56cae71df54 282 Gene3D G3DSA:3.60.20.10 1 259 9.5E-95 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_08360 ee6912465326902f15b9c56cae71df54 282 SUPERFAMILY SSF56235 2 252 7.46E-47 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 SUPERFAMILY SSF63380 3 99 4.66E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 135 144 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 7.9E-35 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Gene3D G3DSA:2.40.30.10 1 100 1.2E-23 T 12-10-2018 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 SUPERFAMILY SSF52343 97 224 9.43E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Pfam PF00175 Oxidoreductase NAD-binding domain 111 201 8.7E-5 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Gene3D G3DSA:3.40.50.80 104 221 5.4E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Pfam PF00970 Oxidoreductase FAD-binding domain 8 98 1.1E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 SUPERFAMILY SSF54292 211 315 4.46E-28 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Gene3D G3DSA:3.10.20.30 222 317 6.7E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_18800 7e12c5a0060ea57da735b51d09af6d12 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 307 3.0E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Gene3D G3DSA:3.30.70.270 312 475 1.2E-38 T 12-10-2018 ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Pfam PF13426 PAS domain 53 149 0.0014 T 12-10-2018 IPR000014 PAS domain ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 SUPERFAMILY SSF55073 327 470 2.16E-30 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Gene3D G3DSA:3.30.450.20 39 169 3.3E-7 T 12-10-2018 ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Pfam PF13188 PAS domain 200 262 0.14 T 12-10-2018 IPR000014 PAS domain ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Gene3D G3DSA:3.30.450.20 197 311 2.7E-8 T 12-10-2018 ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 470 3.0E-32 T 12-10-2018 IPR000160 GGDEF domain ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 SUPERFAMILY SSF55785 48 150 5.33E-7 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 470 2.2E-33 T 12-10-2018 IPR000160 GGDEF domain ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 SMART SM00267 311 474 8.4E-35 T 12-10-2018 IPR000160 GGDEF domain ABD1_24940 29b6acb3b28b3bbffd0fb6d914989d4d 478 SUPERFAMILY SSF55785 216 318 6.46E-10 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 Pfam PF00710 Asparaginase, N-terminal 27 218 5.1E-51 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 PIRSF PIRSF500176 24 355 1.7E-83 T 12-10-2018 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 SUPERFAMILY SSF53774 26 354 2.62E-92 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 Gene3D G3DSA:3.40.50.40 241 355 3.9E-34 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 PRINTS PR00139 Asparaginase/glutaminase family signature 289 307 1.4E-20 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 PRINTS PR00139 Asparaginase/glutaminase family signature 108 126 1.4E-20 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 1.4E-20 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 27 355 1.8E-113 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 PIRSF PIRSF001220 22 355 6.6E-90 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 SMART SM00870 27 349 3.6E-124 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 109 119 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 ABD1_14640 c802c580a7046ffa4ec93a7732f0d354 355 Gene3D G3DSA:3.40.50.1170 25 240 1.2E-86 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ABD1_07410 42abe8d0758e40176ca625fde1f7532f 189 Gene3D G3DSA:2.70.40.10 1 161 1.7E-55 T 12-10-2018 IPR036157 dUTPase-like superfamily ABD1_07410 42abe8d0758e40176ca625fde1f7532f 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.1E-51 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ABD1_07410 42abe8d0758e40176ca625fde1f7532f 189 Pfam PF00692 dUTPase 72 185 2.3E-9 T 12-10-2018 IPR029054 dUTPase-like ABD1_07410 42abe8d0758e40176ca625fde1f7532f 189 SUPERFAMILY SSF51283 3 188 9.55E-55 T 12-10-2018 IPR036157 dUTPase-like superfamily ABD1_07410 42abe8d0758e40176ca625fde1f7532f 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 29.098 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 3.7E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF16193 AAA C-terminal domain 181 250 3.3E-22 T 12-10-2018 IPR032423 AAA C-terminal domain ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 SUPERFAMILY SSF48019 236 418 1.76E-72 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.10.3710.10 329 421 2.9E-30 T 12-10-2018 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:3.40.50.300 1 152 1.9E-43 T 12-10-2018 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 SMART SM00382 41 153 7.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.20.272.10 224 328 4.8E-45 T 12-10-2018 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 SUPERFAMILY SSF52540 4 219 2.66E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 2.3E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_33290 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.10.8.60 153 223 7.1E-7 T 12-10-2018 ABD1_29260 ca61b3d2c50edcc82abc24634999104c 230 SUPERFAMILY SSF55469 35 230 6.28E-69 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_29260 ca61b3d2c50edcc82abc24634999104c 230 Gene3D G3DSA:3.40.109.10 33 230 2.2E-82 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_29260 ca61b3d2c50edcc82abc24634999104c 230 Pfam PF00881 Nitroreductase family 40 208 2.5E-13 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_24140 3cffa364c9d16cc5364bb282a98af76e 321 Gene3D G3DSA:1.20.1530.20 6 321 8.4E-30 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_24140 3cffa364c9d16cc5364bb282a98af76e 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 317 5.7E-91 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter ABD1_24140 3cffa364c9d16cc5364bb282a98af76e 321 PIRSF PIRSF026166 1 321 8.1E-122 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter ABD1_24290 51743bb4501a0cd85a676d73bc640bdc 211 Pfam PF09997 Predicted membrane protein (DUF2238) 43 191 6.5E-47 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 ABD1_24290 51743bb4501a0cd85a676d73bc640bdc 211 PIRSF PIRSF020606 1 211 1.5E-49 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 SMART SM00878 337 443 4.1E-48 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 7.5E-75 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Gene3D G3DSA:3.30.470.130 1 448 2.2E-194 T 12-10-2018 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 SUPERFAMILY SSF52440 2 114 8.63E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 SUPERFAMILY SSF51246 332 447 2.3E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 SUPERFAMILY SSF51230 570 644 2.88E-19 T 12-10-2018 IPR011053 Single hybrid motif ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Gene3D G3DSA:2.40.50.100 570 645 1.6E-22 T 12-10-2018 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 SUPERFAMILY SSF56059 116 327 3.54E-65 T 12-10-2018 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 595 624 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Pfam PF00364 Biotin-requiring enzyme 578 644 1.5E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 7.6E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_28940 dc7b965e3ca8f4017f410e9db4ddb609 646 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.1E-31 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 SUPERFAMILY SSF53244 325 461 1.72E-28 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Pfam PF01225 Mur ligase family, catalytic domain 36 104 1.8E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Gene3D G3DSA:3.40.1190.10 94 322 7.0E-92 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Gene3D G3DSA:3.40.1390.10 1 93 5.4E-39 T 12-10-2018 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Gene3D G3DSA:3.90.190.20 323 466 7.1E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 SUPERFAMILY SSF53623 114 323 1.57E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 SUPERFAMILY SSF63418 13 109 7.98E-23 T 12-10-2018 IPR035911 MurE/MurF, N-terminal ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 463 30.884 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Pfam PF08245 Mur ligase middle domain 120 303 6.4E-44 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 403 1.7E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABD1_30850 fdda1336020829eac7c65a138d4e9701 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 42 461 2.5E-127 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Gene3D G3DSA:3.40.190.10 110 209 6.5E-87 T 12-10-2018 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 238 254 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 12 304 39.442 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 13 219 1.4E-80 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 13 304 1.2E-115 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 234 302 1.0E-18 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Gene3D G3DSA:3.30.160.40 228 313 1.8E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 SUPERFAMILY SSF53850 11 225 9.2E-87 T 12-10-2018 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 SUPERFAMILY SSF54782 228 313 1.22E-25 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PRINTS PR00151 Porphobilinogen deaminase signature 52 72 1.3E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 1.3E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 1.3E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PRINTS PR00151 Porphobilinogen deaminase signature 237 254 1.3E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PRINTS PR00151 Porphobilinogen deaminase signature 150 167 1.3E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 PIRSF PIRSF001438 3 314 8.1E-124 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02450 d3e0500a46c0e762c087f42c59d61f9e 314 Gene3D G3DSA:3.40.190.10 13 217 6.5E-87 T 12-10-2018 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 208 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 139 151 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 7.3E-24 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Gene3D G3DSA:3.40.50.80 203 335 2.1E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 3.8E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 3.8E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 3.8E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Gene3D G3DSA:3.10.20.30 1 102 1.2E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Gene3D G3DSA:2.40.30.10 103 202 4.2E-25 T 12-10-2018 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 SUPERFAMILY SSF63380 109 205 6.45E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Pfam PF00175 Oxidoreductase NAD-binding domain 215 317 2.0E-23 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 88 5.0E-17 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 Pfam PF00970 Oxidoreductase FAD-binding domain 111 205 2.2E-20 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 SUPERFAMILY SSF54292 9 100 4.59E-28 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_12220 35f9aa4bba795f5423aff2ba9190a60d 338 SUPERFAMILY SSF52343 207 335 2.62E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 SUPERFAMILY SSF51306 59 262 1.92E-66 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 Pfam PF10502 Signal peptidase, peptidase S26 217 256 1.3E-5 T 12-10-2018 IPR019533 Peptidase S26 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 Gene3D G3DSA:2.170.230.10 136 218 5.4E-69 T 12-10-2018 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 4.8E-49 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 Gene3D G3DSA:2.10.109.10 59 258 5.4E-69 T 12-10-2018 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 2.3E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 2.3E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 2.3E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABD1_25080 be58c890b168d60f05bf6ba3fb4d383d 275 Pfam PF00717 Peptidase S24-like 68 149 5.1E-22 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 Gene3D G3DSA:1.10.40.30 379 445 2.7E-149 T 12-10-2018 ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 454 2.2E-130 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 Gene3D G3DSA:1.20.200.10 116 446 2.7E-149 T 12-10-2018 ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 Pfam PF00206 Lyase 12 309 7.8E-65 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 4.1E-46 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.8E-17 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.8E-17 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.8E-17 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.8E-17 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 Gene3D G3DSA:1.10.275.10 1 115 6.2E-47 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_24280 56a7c75a306d50446034125f5fa70b46 462 SUPERFAMILY SSF48557 4 447 4.71E-104 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 152 180 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 785 830 1.44E-9 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 709 755 1.83E-5 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 639 683 4.97E-8 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 578 618 2.4E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 711 755 2.2E-6 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 787 830 1.2E-12 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 977 1020 5.6E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 1026 1069 6.6E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 904 946 2.7E-11 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 641 683 1.0E-9 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01476 LysM domain 839 881 9.8E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 700 767 6.7E-8 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Pfam PF01464 Transglycosylase SLT domain 139 241 1.2E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 835 890 5.8E-11 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 891 961 3.0E-14 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 775 834 4.4E-15 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 1023 1071 5.7E-12 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 962 1022 1.2E-12 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 624 695 4.7E-12 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 975 1020 4.97E-8 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:3.10.350.10 576 621 8.1E-12 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 903 946 8.63E-9 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 1024 1069 4.45E-8 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 Gene3D G3DSA:1.10.530.10 129 277 8.1E-31 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF53955 131 290 1.02E-41 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 576 620 5.89E-9 T 12-10-2018 ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 838 882 4.1E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 786 830 3.8E-15 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 903 947 2.8E-12 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 640 684 1.2E-10 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 710 755 1.1E-4 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 976 1020 1.5E-12 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 1025 1069 5.0E-11 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SMART SM00257 577 621 5.4E-6 T 12-10-2018 IPR018392 LysM domain ABD1_10740 5f0603dc516bbb521920165312512cec 1071 SUPERFAMILY SSF54106 838 881 1.57E-7 T 12-10-2018 ABD1_28090 dcd781ffa50c2b4c5ab0e1a3e09c0f38 192 SUPERFAMILY SSF52799 38 164 8.57E-26 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_28090 dcd781ffa50c2b4c5ab0e1a3e09c0f38 192 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 126 136 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 ABD1_28090 dcd781ffa50c2b4c5ab0e1a3e09c0f38 192 Gene3D G3DSA:3.90.190.10 28 191 8.4E-36 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_28090 dcd781ffa50c2b4c5ab0e1a3e09c0f38 192 Pfam PF00782 Dual specificity phosphatase, catalytic domain 54 160 1.6E-11 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 ABD1_13990 33200a17b37027abb430ac17f48fcc66 219 SUPERFAMILY SSF161098 11 198 1.07E-43 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_13990 33200a17b37027abb430ac17f48fcc66 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 1.4E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_13990 33200a17b37027abb430ac17f48fcc66 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 4.7E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_13990 33200a17b37027abb430ac17f48fcc66 219 Gene3D G3DSA:1.10.3720.10 1 215 1.3E-54 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 82 3.9E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 Pfam PF00155 Aminotransferase class I and II 131 461 2.2E-41 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 SUPERFAMILY SSF53383 104 462 1.71E-86 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 SMART SM00345 23 82 2.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 Gene3D G3DSA:3.40.640.10 153 369 8.2E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 Gene3D G3DSA:1.10.10.10 5 87 2.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 SUPERFAMILY SSF46785 12 85 1.93E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_20200 7c3795c963c3653bf4a3f1e5a55b9efa 479 Gene3D G3DSA:3.90.1150.10 115 462 8.2E-83 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Gene3D G3DSA:1.10.1780.10 1 143 1.8E-38 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-15 T 12-10-2018 IPR004176 Clp, N-terminal ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Gene3D G3DSA:3.40.50.300 167 354 6.9E-64 T 12-10-2018 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 2.4E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 2.4E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 2.4E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 607 2.4E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 516 534 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SMART SM00382 485 652 6.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SMART SM00382 205 351 4.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 305 1.1E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 731 4.4E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Gene3D G3DSA:3.40.50.300 437 649 3.7E-81 T 12-10-2018 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SUPERFAMILY SSF52540 168 420 7.9E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Gene3D G3DSA:1.10.8.60 651 754 3.3E-28 T 12-10-2018 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Gene3D G3DSA:1.10.8.60 355 436 2.3E-31 T 12-10-2018 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SMART SM01086 651 743 1.9E-27 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SUPERFAMILY SSF81923 1 141 2.49E-49 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 643 3.1E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_19300 3d86f73acd3361961c1d7cfbcea98d89 758 SUPERFAMILY SSF52540 435 727 4.36E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 SUPERFAMILY SSF50156 461 548 3.28E-7 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 SUPERFAMILY SSF55486 180 436 3.66E-15 T 12-10-2018 ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 5.4E-47 T 12-10-2018 IPR007963 Peptidase M61, catalytic domain ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 Gene3D G3DSA:1.10.390.60 175 445 2.2E-100 T 12-10-2018 ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 PIRSF PIRSF016493 1 567 1.6E-193 T 12-10-2018 IPR024191 Peptidase M61 ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 Gene3D G3DSA:2.60.40.3650 1 172 3.2E-55 T 12-10-2018 ABD1_24680 bb76b811ac99b7bfa859e95a8bfe0a6d 567 Gene3D G3DSA:2.30.42.10 468 567 3.1E-13 T 12-10-2018 ABD1_30240 d97744ee7d341d05bc8401b0069b9bfe 264 Pfam PF08241 Methyltransferase domain 49 136 5.1E-17 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABD1_30240 d97744ee7d341d05bc8401b0069b9bfe 264 Gene3D G3DSA:3.40.50.150 11 241 1.3E-36 T 12-10-2018 ABD1_30240 d97744ee7d341d05bc8401b0069b9bfe 264 SUPERFAMILY SSF53335 11 183 5.94E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 24 186 1.1E-33 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 SUPERFAMILY SSF46785 97 172 1.28E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 Gene3D G3DSA:1.10.10.10 14 94 2.5E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 181 9.9E-49 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 SUPERFAMILY SSF46785 18 94 9.29E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 PIRSF PIRSF019345 5 198 1.6E-53 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABD1_07670 364ed96ea91628ac06f2cf931555e3ce 198 Gene3D G3DSA:1.10.10.10 95 190 2.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 PIRSF PIRSF003107 9 230 5.1E-64 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 SUPERFAMILY SSF109755 14 234 3.56E-64 T 12-10-2018 ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 122 234 2.8E-32 T 12-10-2018 IPR038078 PhoU-like domain superfamily ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 29 114 3.5E-16 T 12-10-2018 IPR026022 PhoU domain ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 132 216 5.2E-16 T 12-10-2018 IPR026022 PhoU domain ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 222 2.7E-64 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ABD1_02400 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 4 121 2.8E-38 T 12-10-2018 IPR038078 PhoU-like domain superfamily ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 Gene3D G3DSA:3.40.50.620 1 247 2.1E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 2.1E-45 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 PIRSF PIRSF000090 1 249 4.3E-81 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 SUPERFAMILY SSF52402 1 242 1.74E-83 T 12-10-2018 ABD1_25810 481e3922d7dc4de22059e3117f1e8def 249 SMART SM00893 23 211 9.7E-67 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 Pfam PF01479 S4 domain 3 43 1.4E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 SUPERFAMILY SSF55174 3 84 1.62E-8 T 12-10-2018 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 SMART SM00363 1 64 0.0022 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 SUPERFAMILY SSF55120 61 226 6.24E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 Gene3D G3DSA:3.10.290.10 2 59 1.8E-9 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 Gene3D G3DSA:3.30.70.1560 129 210 1.1E-49 T 12-10-2018 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 Pfam PF00849 RNA pseudouridylate synthase 62 192 4.4E-14 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 223 6.1E-40 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_21190 7222561d8402355e47394c2e13b08dd1 234 Gene3D G3DSA:3.30.70.580 62 226 1.1E-49 T 12-10-2018 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 269 3.3E-68 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 270 40.032 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 Pfam PF05175 Methyltransferase small domain 92 193 5.0E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 266 3.6E-84 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 Gene3D G3DSA:1.10.8.10 2 81 5.9E-14 T 12-10-2018 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 Gene3D G3DSA:3.40.50.150 83 270 3.5E-57 T 12-10-2018 ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 SUPERFAMILY SSF53335 15 267 4.4E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_21500 873bc85b6cbebf0a083a82f00658aea5 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_05290 392f7d6107ae574b7f1d15b0e825efe0 90 Pfam PF11112 Pyocin activator protein PrtN 8 81 8.5E-19 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 ABD1_05290 392f7d6107ae574b7f1d15b0e825efe0 90 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 8 75 0.01 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 ABD1_07790 4d2aaaacc50b1c9f05d9e71558f7e1bf 219 SUPERFAMILY SSF55821 17 217 3.2E-82 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABD1_07790 4d2aaaacc50b1c9f05d9e71558f7e1bf 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 9.5E-81 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_07790 4d2aaaacc50b1c9f05d9e71558f7e1bf 219 Gene3D G3DSA:3.90.870.10 7 218 5.6E-87 T 12-10-2018 ABD1_07790 4d2aaaacc50b1c9f05d9e71558f7e1bf 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 41.727 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_07790 4d2aaaacc50b1c9f05d9e71558f7e1bf 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 3.4E-77 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_12040 c9349339aa3aea37371142702adf08b7 471 ProSitePatterns PS01068 OmpA-like domain. 401 445 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ABD1_12040 c9349339aa3aea37371142702adf08b7 471 SUPERFAMILY SSF103088 360 468 3.14E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_12040 c9349339aa3aea37371142702adf08b7 471 Gene3D G3DSA:3.30.1330.60 332 471 6.8E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_12040 c9349339aa3aea37371142702adf08b7 471 PRINTS PR01021 OMPA domain signature 369 391 4.0E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_12040 c9349339aa3aea37371142702adf08b7 471 PRINTS PR01021 OMPA domain signature 399 414 4.0E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_12040 c9349339aa3aea37371142702adf08b7 471 PRINTS PR01021 OMPA domain signature 414 430 4.0E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_12040 c9349339aa3aea37371142702adf08b7 471 Pfam PF00691 OmpA family 368 463 1.6E-22 T 12-10-2018 IPR006665 OmpA-like domain ABD1_21850 59462fde8e3411958434beba6460eef8 524 Gene3D G3DSA:3.40.140.20 387 524 7.8E-62 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.747 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 8.4E-241 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 7.1E-119 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 SUPERFAMILY SSF52335 3 192 3.79E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABD1_21850 59462fde8e3411958434beba6460eef8 524 Pfam PF02142 MGS-like domain 15 128 3.1E-30 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain ABD1_21850 59462fde8e3411958434beba6460eef8 524 Gene3D G3DSA:3.40.140.20 209 365 3.4E-55 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 SMART SM00851 15 128 6.4E-62 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain ABD1_21850 59462fde8e3411958434beba6460eef8 524 PIRSF PIRSF000414 1 524 3.7E-223 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_21850 59462fde8e3411958434beba6460eef8 524 Gene3D G3DSA:3.40.50.1380 1 195 4.2E-86 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABD1_21850 59462fde8e3411958434beba6460eef8 524 SUPERFAMILY SSF53927 212 524 2.21E-129 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABD1_21850 59462fde8e3411958434beba6460eef8 524 SMART SM00798 133 456 9.9E-212 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_17450 edc06db51998bfb7108cfddf0fd2dc0d 206 Pfam PF00005 ABC transporter 26 160 5.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_17450 edc06db51998bfb7108cfddf0fd2dc0d 206 SMART SM00382 23 200 2.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_17450 edc06db51998bfb7108cfddf0fd2dc0d 206 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_17450 edc06db51998bfb7108cfddf0fd2dc0d 206 SUPERFAMILY SSF52540 14 205 3.19E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_17450 edc06db51998bfb7108cfddf0fd2dc0d 206 Gene3D G3DSA:3.40.50.300 3 206 1.3E-50 T 12-10-2018 ABD1_23580 65411ec30adcdff35ed6dc279a43707c 327 Pfam PF02625 XdhC and CoxI family 17 82 1.7E-13 T 12-10-2018 IPR003777 XdhC- CoxI ABD1_23580 65411ec30adcdff35ed6dc279a43707c 327 Gene3D G3DSA:3.40.50.720 174 323 6.6E-33 T 12-10-2018 ABD1_23580 65411ec30adcdff35ed6dc279a43707c 327 Pfam PF13478 XdhC Rossmann domain 175 319 1.3E-33 T 12-10-2018 IPR027051 XdhC Rossmann domain ABD1_23580 65411ec30adcdff35ed6dc279a43707c 327 SUPERFAMILY SSF51735 172 264 3.66E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_23580 65411ec30adcdff35ed6dc279a43707c 327 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 320 4.7E-87 T 12-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 Gene3D G3DSA:3.40.50.300 11 189 4.1E-60 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 SUPERFAMILY SSF52540 20 183 6.64E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 ProSitePatterns PS01128 Shikimate kinase signature. 74 99 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 91 100 1.3E-25 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 21 36 1.3E-25 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 112 129 1.3E-25 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 73 81 1.3E-25 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 45 58 1.3E-25 T 12-10-2018 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 Hamap MF_00109 Shikimate kinase [aroK]. 18 184 29.932 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABD1_30750 f7cad80ee658274038554f149bbce7ea 189 Pfam PF01202 Shikimate kinase 27 183 9.6E-54 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABD1_15990 c105bc75ad6d9888c86ded764f3aea9e 380 SUPERFAMILY SSF161098 175 363 7.33E-22 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_15990 c105bc75ad6d9888c86ded764f3aea9e 380 Gene3D G3DSA:1.10.3720.10 165 379 1.5E-21 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_15990 c105bc75ad6d9888c86ded764f3aea9e 380 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 380 2.0E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_15990 c105bc75ad6d9888c86ded764f3aea9e 380 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 58 7.0E-7 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 Gene3D G3DSA:2.20.28.140 1 33 4.0E-13 T 12-10-2018 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 8.5E-31 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 Gene3D G3DSA:3.40.30.10 37 143 8.8E-30 T 12-10-2018 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 SUPERFAMILY SSF52833 22 140 2.37E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 Pfam PF00085 Thioredoxin 38 137 1.6E-27 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 PIRSF PIRSF000077 35 139 7.2E-31 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 PRINTS PR00421 Thioredoxin family signature 103 114 7.2E-7 T 12-10-2018 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 PRINTS PR00421 Thioredoxin family signature 64 73 7.2E-7 T 12-10-2018 ABD1_28710 4e4059ac66d00c407138305f5826cdba 145 PRINTS PR00421 Thioredoxin family signature 56 64 7.2E-7 T 12-10-2018 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Pfam PF12826 Helix-hairpin-helix motif 526 574 3.3E-6 T 12-10-2018 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SUPERFAMILY SSF82771 2 78 1.44E-19 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SMART SM00465 1 76 8.0E-16 T 12-10-2018 IPR000305 GIY-YIG endonuclease ABD1_02870 116d00c0751ab7ebf666888097a09384 575 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 554 2.9E-174 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 572 25.132 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 507 6.1E-49 T 12-10-2018 IPR001162 UvrC family homology region ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Pfam PF02151 UvrB/uvrC motif 184 217 2.0E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Gene3D G3DSA:3.40.1440.10 1 80 3.3E-27 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SUPERFAMILY SSF46600 169 222 9.15E-13 T 12-10-2018 IPR036876 UVR domain superfamily ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Gene3D G3DSA:1.10.150.20 520 574 4.8E-19 T 12-10-2018 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Gene3D G3DSA:3.30.420.340 351 517 1.9E-52 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SMART SM00278 521 540 86.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SMART SM00278 553 572 9.5 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_02870 116d00c0751ab7ebf666888097a09384 575 SUPERFAMILY SSF47781 486 574 6.04E-23 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_02870 116d00c0751ab7ebf666888097a09384 575 Pfam PF01541 GIY-YIG catalytic domain 4 71 5.3E-7 T 12-10-2018 IPR000305 GIY-YIG endonuclease ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 Gene3D G3DSA:2.30.42.10 113 201 9.8E-67 T 12-10-2018 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 SUPERFAMILY SSF50156 116 189 1.39E-8 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 SUPERFAMILY SSF52096 53 377 1.82E-61 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 65 377 4.1E-68 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 Gene3D G3DSA:3.30.750.44 64 347 9.8E-67 T 12-10-2018 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 Pfam PF03572 Peptidase family S41 210 369 8.4E-45 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 Gene3D G3DSA:3.90.226.10 202 368 9.8E-67 T 12-10-2018 ABD1_02170 1fab8bec5bdd8fb9ecd29899b47b0b95 394 SMART SM00245 184 372 3.1E-46 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Pfam PF00873 AcrB/AcrD/AcrF family 3 1035 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.2090.10 729 817 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 560 577 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 2.2E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82693 41 134 2.51E-26 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1045 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82866 839 1034 2.75E-43 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.2090.10 181 276 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.70.1430 575 676 0.0 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82714 185 271 4.71E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.70.1430 40 825 0.0 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:1.20.1640.10 10 520 0.0 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.70.1440 677 874 0.0 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82693 680 865 6.8E-27 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82714 730 817 2.22E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82693 573 679 6.28E-28 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82693 139 331 2.77E-26 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:3.30.70.1320 135 333 0.0 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 SUPERFAMILY SSF82866 297 497 1.24E-53 T 12-10-2018 ABD1_23040 4098d4e26b12e1e8906dd66d26ff99af 1059 Gene3D G3DSA:1.20.1640.10 521 1031 0.0 T 12-10-2018 ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 Gene3D G3DSA:3.30.300.70 2 58 1.3E-5 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 Gene3D G3DSA:3.30.300.70 59 100 7.0E-11 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 Pfam PF02576 RimP N-terminal domain 13 103 1.0E-20 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 SUPERFAMILY SSF75420 4 103 7.19E-20 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 1.3E-12 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 SUPERFAMILY SSF74942 104 173 5.1E-11 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ABD1_03080 63af3c5a184edac3eed67dfff9c94907 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 21.799 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 ABD1_31880 90fcefad996db074fa380bff64e8edad 325 Gene3D G3DSA:3.90.180.10 4 310 1.1E-86 T 12-10-2018 ABD1_31880 90fcefad996db074fa380bff64e8edad 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 2.5E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_31880 90fcefad996db074fa380bff64e8edad 325 Gene3D G3DSA:3.40.50.720 122 293 1.1E-86 T 12-10-2018 ABD1_31880 90fcefad996db074fa380bff64e8edad 325 SMART SM00829 10 323 2.3E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_31880 90fcefad996db074fa380bff64e8edad 325 SUPERFAMILY SSF51735 113 287 2.1E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_31880 90fcefad996db074fa380bff64e8edad 325 SUPERFAMILY SSF50129 1 144 1.0E-30 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_31880 90fcefad996db074fa380bff64e8edad 325 Pfam PF00107 Zinc-binding dehydrogenase 151 270 1.7E-13 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 Gene3D G3DSA:1.10.10.10 10 98 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 Gene3D G3DSA:3.40.190.290 100 305 7.8E-21 T 12-10-2018 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 Pfam PF03466 LysR substrate binding domain 96 303 1.5E-22 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 8.5E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 SUPERFAMILY SSF46785 11 110 1.29E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_05510 3d0ad5cf412614e84e07dd3505ffb254 313 SUPERFAMILY SSF53850 97 304 3.88E-25 T 12-10-2018 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 Gene3D G3DSA:3.40.1500.10 1 316 7.1E-139 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PIRSF PIRSF000166 1 310 3.4E-119 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 Pfam PF01218 Coproporphyrinogen III oxidase 11 309 2.6E-119 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 132 154 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 97 121 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 241 268 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 269 295 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 169 198 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 38 54 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 PRINTS PR00073 Coprogen oxidase signature 55 76 2.0E-75 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29950 8624356d0a97f19a15a793d0e60775c3 316 SUPERFAMILY SSF102886 7 309 3.01E-125 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABD1_29920 039a75220282386a595cf82327a780f1 276 Gene3D G3DSA:3.40.190.80 145 274 1.7E-32 T 12-10-2018 ABD1_29920 039a75220282386a595cf82327a780f1 276 SUPERFAMILY SSF56655 1 272 3.14E-75 T 12-10-2018 ABD1_29920 039a75220282386a595cf82327a780f1 276 Pfam PF00459 Inositol monophosphatase family 2 264 1.8E-65 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 1.6E-49 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABD1_29920 039a75220282386a595cf82327a780f1 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ABD1_29920 039a75220282386a595cf82327a780f1 276 Gene3D G3DSA:3.30.540.10 1 144 4.4E-45 T 12-10-2018 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 547 1049 2.9E-222 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Pfam PF00171 Aldehyde dehydrogenase family 598 1048 8.0E-119 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Pfam PF01619 Proline dehydrogenase 206 506 1.3E-97 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 SUPERFAMILY SSF51730 198 555 9.81E-119 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Gene3D G3DSA:3.40.309.10 824 1020 1.3E-144 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 849 860 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 PIRSF PIRSF000197 13 1249 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 84 195 1.5E-44 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 SUPERFAMILY SSF53720 576 1049 8.25E-128 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Gene3D G3DSA:3.20.20.220 143 547 4.8E-148 T 12-10-2018 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Gene3D G3DSA:3.20.20.220 24 122 2.1E-10 T 12-10-2018 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 Gene3D G3DSA:3.40.605.10 571 1049 1.3E-144 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_15360 f8657839f0c9517278c2f3df76e11a7a 1250 SUPERFAMILY SSF81935 25 197 3.92E-62 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.50.100 70 214 1.5E-104 T 12-10-2018 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 297 1.6E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.420.20 309 378 1.5E-104 T 12-10-2018 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.30.170 57 308 1.5E-104 T 12-10-2018 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 2.3E-82 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 SUPERFAMILY SSF111369 59 305 2.62E-79 T 12-10-2018 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Pfam PF00529 HlyD membrane-fusion protein of T1SS 298 365 1.1E-7 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_26820 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:1.10.287.470 105 178 1.5E-104 T 12-10-2018 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 SUPERFAMILY SSF55021 418 512 2.2E-24 T 12-10-2018 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.50.1100 50 146 5.4E-130 T 12-10-2018 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 SUPERFAMILY SSF53686 8 363 1.31E-95 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 1.0E-76 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.1020.10 336 513 1.5E-64 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 512 6.3E-216 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 6.7E-24 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 423 512 4.2E-23 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABD1_19380 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.50.1100 14 325 5.4E-130 T 12-10-2018 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 Gene3D G3DSA:3.20.20.70 76 283 1.3E-18 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 310 8.4E-121 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 PIRSF PIRSF005963 6 323 6.3E-126 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 SUPERFAMILY SSF102114 49 312 8.24E-59 T 12-10-2018 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 SMART SM00729 81 286 2.6E-16 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 141.758 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_16910 7926731de5058206af8e1b99dcd9ac10 328 Pfam PF04055 Radical SAM superfamily 88 248 1.8E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 Pfam PF00501 AMP-binding enzyme 41 440 2.4E-70 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 Gene3D G3DSA:3.40.50.12780 21 436 6.4E-92 T 12-10-2018 ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 527 3.5E-22 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 SUPERFAMILY SSF56801 30 543 1.23E-129 T 12-10-2018 ABD1_21460 738d183fb5de12bacbf8cd6f91d87c51 547 Gene3D G3DSA:3.30.300.30 437 547 4.6E-27 T 12-10-2018 ABD1_26210 f8197a59818a077f031332052735736c 610 PIRSF PIRSF001348 1 608 4.5E-274 T 12-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:2.170.8.10 53 395 9.1E-263 T 12-10-2018 ABD1_26210 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:3.40.449.10 18 240 9.1E-263 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 51.583 T 12-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 603 3.3E-168 T 12-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:3.90.228.20 241 601 9.1E-263 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 SUPERFAMILY SSF68923 4 240 3.71E-100 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 SUPERFAMILY SSF53795 241 606 5.04E-156 T 12-10-2018 ABD1_26210 f8197a59818a077f031332052735736c 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 3.1E-103 T 12-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ABD1_26210 f8197a59818a077f031332052735736c 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 12-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Pfam PF13953 PapC C-terminal domain 764 827 5.8E-17 T 12-10-2018 IPR025949 PapC-like, C-terminal domain ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Gene3D G3DSA:2.60.40.3110 278 367 1.5E-35 T 12-10-2018 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Gene3D G3DSA:3.10.20.410 44 166 4.3E-32 T 12-10-2018 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 SUPERFAMILY SSF141729 67 179 3.27E-33 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Gene3D G3DSA:2.60.40.2070 762 845 7.8E-16 T 12-10-2018 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Gene3D G3DSA:2.60.40.2610 669 759 4.6E-28 T 12-10-2018 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Pfam PF13954 PapC N-terminal domain 47 188 4.0E-44 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 ABD1_15110 d3fd342c3251f089c6335b9c3b87e090 845 Pfam PF00577 Outer membrane usher protein 206 754 3.9E-153 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.4E-90 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 SUPERFAMILY SSF51366 4 218 1.57E-71 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 PIRSF PIRSF001461 1 225 2.0E-96 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 6.7E-82 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_01130 5ec6378df2fcdf2ac1d3dcce07ab171f 225 Gene3D G3DSA:3.20.20.70 3 221 3.4E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 363 387 3.1E-20 T 12-10-2018 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 329 341 3.1E-20 T 12-10-2018 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 224 240 3.1E-20 T 12-10-2018 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 247 261 3.1E-20 T 12-10-2018 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 Pfam PF02384 N-6 DNA Methylase 200 536 1.1E-118 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 Gene3D G3DSA:1.20.1260.30 2 184 9.2E-75 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 Gene3D G3DSA:3.40.50.150 201 519 1.7E-131 T 12-10-2018 ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 Pfam PF12161 HsdM N-terminal domain 12 181 1.6E-20 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ABD1_05630 0ddcc959cbfda1b4ff4b57f7a78bdb2d 576 SUPERFAMILY SSF53335 10 575 4.66E-140 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 274 352 3.7E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 SUPERFAMILY SSF50156 273 357 2.04E-12 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 Gene3D G3DSA:2.30.42.10 267 354 1.5E-12 T 12-10-2018 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 SUPERFAMILY SSF52096 225 574 8.78E-54 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 Pfam PF03572 Peptidase family S41 395 568 5.1E-40 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 SMART SM00245 360 570 2.8E-35 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 Gene3D G3DSA:3.90.226.10 359 588 4.1E-54 T 12-10-2018 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 236 589 1.5E-74 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 SMART SM00228 276 356 3.9E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_04650 459f5e324bb0d19cbcb9637868647453 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 574 722 2.7E-32 T 12-10-2018 IPR020992 Tail specific protease, C-terminal ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 2.0E-27 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 40.39 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 1.5E-91 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 SUPERFAMILY SSF53671 20 324 1.06E-92 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 2.9E-41 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 4.5E-20 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 4.5E-20 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 4.5E-20 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 4.5E-20 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 1.1E-29 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 Gene3D G3DSA:3.40.50.1370 21 321 8.1E-90 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_12020 954ea543ba8c6c6165725372fb4c5782 338 Gene3D G3DSA:3.40.50.1370 152 310 8.1E-90 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 Gene3D G3DSA:3.30.360.10 129 236 9.6E-103 T 12-10-2018 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 35.308 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.1E-41 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 SUPERFAMILY SSF55347 129 238 5.45E-38 T 12-10-2018 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 Gene3D G3DSA:3.40.50.720 7 266 9.6E-103 T 12-10-2018 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 1.3E-42 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 3.9E-99 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 PIRSF PIRSF000161 3 270 5.2E-87 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_33460 863a76325f4fbd138a37d6028316c706 273 SUPERFAMILY SSF51735 5 270 5.05E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 83 177 9.29E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 PIRSF PIRSF002162 1 177 5.1E-45 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 1 82 2.4E-27 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-72 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 1 82 8.15E-23 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 83 177 3.7E-38 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 90 164 1.3E-17 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 11 82 5.0E-16 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29510 cdd39288bc66b6d5f471e126870dde86 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.363 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF52440 1 111 2.23E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Gene3D G3DSA:2.40.100.10 880 1103 5.0E-96 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SMART SM00797 470 758 1.1E-163 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SMART SM00796 797 1030 3.6E-110 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Gene3D G3DSA:2.40.100.10 621 774 1.2E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 318 4.8E-64 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 471 741 5.3E-85 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF02785 Biotin carboxylase C-terminal domain 335 439 5.2E-32 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF51230 1124 1197 5.63E-17 T 12-10-2018 IPR011053 Single hybrid motif ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 798 1019 3.8E-49 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF56059 83 349 1.5E-61 T 12-10-2018 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 762 2.5E-92 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF50891 914 1046 1.1E-25 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1197 0.0 T 12-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Pfam PF00364 Biotin-requiring enzyme 1138 1197 2.5E-11 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF51246 329 441 1.46E-32 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF50891 622 747 5.69E-32 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Gene3D G3DSA:2.40.50.100 1130 1197 3.5E-20 T 12-10-2018 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Gene3D G3DSA:3.30.470.130 1 445 1.7E-179 T 12-10-2018 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SUPERFAMILY SSF160467 798 890 1.57E-20 T 12-10-2018 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 Gene3D G3DSA:3.30.1360.40 781 876 2.6E-30 T 12-10-2018 ABD1_13050 c1401428fc7b31d02a4cdf74a1d2236a 1201 SMART SM00878 335 439 3.7E-45 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_30970 004b63393d671204cd98ae5b66270fc4 318 SUPERFAMILY SSF161111 19 214 3.01E-59 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_30970 004b63393d671204cd98ae5b66270fc4 318 SUPERFAMILY SSF160240 218 289 3.4E-6 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABD1_30970 004b63393d671204cd98ae5b66270fc4 318 Gene3D G3DSA:1.20.1510.10 19 213 2.7E-48 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_30970 004b63393d671204cd98ae5b66270fc4 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 291 5.9E-89 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_30970 004b63393d671204cd98ae5b66270fc4 318 Pfam PF01545 Cation efflux family 22 213 5.5E-49 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 SUPERFAMILY SSF53383 2 357 8.03E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 Gene3D G3DSA:3.90.1150.10 250 359 1.2E-44 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 PIRSF PIRSF000525 1 359 5.1E-150 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 2.9E-159 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 Pfam PF00266 Aminotransferase class-V 4 347 7.4E-58 T 12-10-2018 IPR000192 Aminotransferase class V domain ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 Gene3D G3DSA:3.40.640.10 16 249 7.4E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_25700 9f0e318407b2666a0b7d91c89fc39e03 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.678 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 1.8E-54 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 2.9E-16 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 SUPERFAMILY SSF52440 9 99 3.93E-26 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 Gene3D G3DSA:3.40.50.20 1 87 1.9E-33 T 12-10-2018 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 SUPERFAMILY SSF56059 99 304 4.6E-56 T 12-10-2018 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 PIRSF PIRSF039102 5 50 2.2E-7 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 PIRSF PIRSF039102 41 308 9.3E-81 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 34.033 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 2.5E-99 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32300 43e0aa7f0792e88ab54915acbf836000 308 Gene3D G3DSA:3.30.1490.20 115 179 9.9E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 SUPERFAMILY SSF55666 154 236 5.76E-24 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.024 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 Gene3D G3DSA:3.30.230.70 10 237 1.5E-63 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-115 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 SUPERFAMILY SSF54211 1 181 7.09E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.3E-9 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_00400 f429e7aab9b18312a2ebc6e01958cce5 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Gene3D G3DSA:3.10.50.40 179 274 4.6E-45 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Gene3D G3DSA:1.10.4030.30 31 278 4.6E-45 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Pfam PF09312 SurA N-terminal domain 31 149 3.5E-23 T 12-10-2018 IPR015391 SurA N-terminal ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Gene3D G3DSA:3.10.50.40 279 419 2.1E-43 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Hamap MF_01183 Chaperone SurA [surA]. 13 427 25.425 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 SUPERFAMILY SSF54534 182 275 3.14E-11 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 SUPERFAMILY SSF109998 31 192 1.09E-26 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Pfam PF13616 PPIC-type PPIASE domain 281 383 7.0E-32 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 SUPERFAMILY SSF54534 283 384 4.25E-33 T 12-10-2018 ABD1_15550 e43420b3c0fd378ebd1d846008b0bab1 436 Pfam PF00639 PPIC-type PPIASE domain 190 270 1.2E-5 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ABD1_21210 e6d896d4dd2782f1eb3dc5c8e2ba2ff6 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 150 18.052 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABD1_21210 e6d896d4dd2782f1eb3dc5c8e2ba2ff6 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 22 133 5.0E-40 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABD1_21210 e6d896d4dd2782f1eb3dc5c8e2ba2ff6 150 Pfam PF04284 Protein of unknown function (DUF441) 10 148 3.6E-46 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABD1_19260 5f60c6d6e777751655a707e9e04b700b 186 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 7.5E-10 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABD1_19260 5f60c6d6e777751655a707e9e04b700b 186 Pfam PF10400 Virulence activator alpha C-term 91 175 6.8E-19 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal ABD1_19260 5f60c6d6e777751655a707e9e04b700b 186 Gene3D G3DSA:1.10.10.10 1 88 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19260 5f60c6d6e777751655a707e9e04b700b 186 SUPERFAMILY SSF46785 3 176 2.47E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06040 19e5eeef5c291e5f32cf8f1505a458ec 123 SUPERFAMILY SSF143990 1 122 5.49E-40 T 12-10-2018 IPR037238 YbiA-like superfamily ABD1_06040 19e5eeef5c291e5f32cf8f1505a458ec 123 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 1 120 1.1E-40 T 12-10-2018 IPR012816 NADAR ABD1_06040 19e5eeef5c291e5f32cf8f1505a458ec 123 Pfam PF08719 Domain of unknown function (DUF1768) 1 120 3.9E-44 T 12-10-2018 IPR012816 NADAR ABD1_06040 19e5eeef5c291e5f32cf8f1505a458ec 123 Gene3D G3DSA:1.10.357.40 1 123 3.3E-33 T 12-10-2018 IPR037238 YbiA-like superfamily ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 5.6E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 Gene3D G3DSA:3.40.50.12780 6 448 7.9E-123 T 12-10-2018 ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 Pfam PF00501 AMP-binding enzyme 26 458 1.4E-110 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 Gene3D G3DSA:3.30.300.30 452 557 1.2E-29 T 12-10-2018 ABD1_13750 b5ad5d6ab42839371a26c5c9bf7a6b6d 564 SUPERFAMILY SSF56801 16 553 1.01E-154 T 12-10-2018 ABD1_07350 3cf920f9152a4e5bc58bf9e39913a8ff 409 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 150 391 1.2E-96 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABD1_07350 3cf920f9152a4e5bc58bf9e39913a8ff 409 Gene3D G3DSA:3.40.50.300 146 389 4.2E-80 T 12-10-2018 ABD1_07350 3cf920f9152a4e5bc58bf9e39913a8ff 409 ProSitePatterns PS01215 Mrp family signature. 257 273 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 ABD1_07350 3cf920f9152a4e5bc58bf9e39913a8ff 409 SUPERFAMILY SSF52540 143 374 1.55E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_07350 3cf920f9152a4e5bc58bf9e39913a8ff 409 Hamap MF_02040 Iron-sulfur cluster carrier protein. 144 403 36.263 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ABD1_03800 1bc4fb33f6d4c5e852ffa9acd03d25ef 123 Gene3D G3DSA:1.10.420.10 1 98 1.0E-55 T 12-10-2018 ABD1_03800 1bc4fb33f6d4c5e852ffa9acd03d25ef 123 Gene3D G3DSA:1.10.520.10 99 122 1.0E-55 T 12-10-2018 ABD1_03800 1bc4fb33f6d4c5e852ffa9acd03d25ef 123 SUPERFAMILY SSF48113 1 122 1.77E-44 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03800 1bc4fb33f6d4c5e852ffa9acd03d25ef 123 Pfam PF00141 Peroxidase 1 96 1.8E-6 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_22050 e1817bcf55d315d5ac8eeb070b987c8c 169 SUPERFAMILY SSF55729 5 151 5.22E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_22050 e1817bcf55d315d5ac8eeb070b987c8c 169 Gene3D G3DSA:3.40.630.30 2 165 1.7E-28 T 12-10-2018 ABD1_22050 e1817bcf55d315d5ac8eeb070b987c8c 169 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 4.5E-23 T 12-10-2018 IPR000182 GNAT domain ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:3.40.50.300 53 313 3.9E-111 T 12-10-2018 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 407 1.6E-204 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 SUPERFAMILY SSF52540 58 398 1.2E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 SUPERFAMILY SSF57716 9 44 1.71E-10 T 12-10-2018 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 SMART SM00382 110 331 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 390 6.4E-15 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 SMART SM01086 315 409 3.9E-33 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 SMART SM00994 8 47 1.4E-19 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.65 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:1.10.8.60 314 422 2.9E-38 T 12-10-2018 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 309 2.9E-51 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:3.30.50.30 2 47 9.4E-17 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily ABD1_04500 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABD1_24000 86e552accbef81541123d685782f3ce8 226 Pfam PF00857 Isochorismatase family 20 172 2.2E-20 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_24000 86e552accbef81541123d685782f3ce8 226 SUPERFAMILY SSF52499 12 209 2.09E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_24000 86e552accbef81541123d685782f3ce8 226 Gene3D G3DSA:3.40.50.850 10 215 1.3E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 7.4E-105 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Gene3D G3DSA:3.40.30.10 1 186 3.3E-65 T 12-10-2018 ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 SUPERFAMILY SSF52833 1 186 2.87E-59 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 4.9E-6 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Pfam PF00578 AhpC/TSA family 5 132 2.5E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_12150 ac6dfa1aa0729fd24450a40a01f5d3ab 187 PIRSF PIRSF000239 1 187 1.4E-55 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_33060 4f5c232bc715cbda1417ace8929d0266 470 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_33060 4f5c232bc715cbda1417ace8929d0266 470 PIRSF PIRSF006060 1 467 2.1E-69 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_33060 4f5c232bc715cbda1417ace8929d0266 470 Gene3D G3DSA:1.20.1740.10 6 465 1.0E-66 T 12-10-2018 ABD1_33060 4f5c232bc715cbda1417ace8929d0266 470 Pfam PF00324 Amino acid permease 15 450 2.3E-106 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 SUPERFAMILY SSF56784 1 196 6.27E-44 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 4.4E-14 T 12-10-2018 ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 Gene3D G3DSA:3.90.1470.10 13 128 3.5E-78 T 12-10-2018 ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 Gene3D G3DSA:3.40.50.1000 3 190 3.5E-78 T 12-10-2018 IPR023214 HAD superfamily ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 201 7.5E-96 T 12-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 ABD1_27200 565d9e0110f8ddfa86c889aca07cdf76 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 160 1.7E-10 T 12-10-2018 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.627 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Gene3D G3DSA:2.40.50.100 21 85 6.4E-30 T 12-10-2018 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 6.4E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.2E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26770 dbec8da8eaa414a3cfd754fc53e0b7ce 85 SUPERFAMILY SSF110324 2 80 2.02E-33 T 12-10-2018 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 SUPERFAMILY SSF51905 7 261 5.07E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 SMART SM01228 543 614 1.5E-42 T 12-10-2018 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.838 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:3.50.50.60 301 458 1.4E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:3.50.50.60 2 228 1.4E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Pfam PF13932 GidA associated domain 402 612 2.7E-75 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:1.10.150.570 566 619 6.9E-23 T 12-10-2018 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:1.10.10.1800 459 547 6.1E-23 T 12-10-2018 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 Pfam PF01134 Glucose inhibited division protein A 8 398 7.2E-165 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABD1_21800 b55da50a5369a75ba81468209d9cc74c 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 8.1E-274 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 SUPERFAMILY SSF53178 5 191 1.14E-68 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 3.9E-64 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 34.883 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 Gene3D G3DSA:3.40.50.1470 1 193 1.2E-75 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABD1_07830 aae4fd394dd47e0af71446f5639472df 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 5.2E-54 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 Gene3D G3DSA:3.40.50.720 2 249 2.1E-79 T 12-10-2018 ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 5.2E-69 T 12-10-2018 ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 SUPERFAMILY SSF51735 4 248 5.48E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09210 6886904d70872778d10dcbf7e1ec014c 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0051 T 12-10-2018 ABD1_18040 23df5175aa1d160fb514abc2d6a0fe99 123 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_18040 23df5175aa1d160fb514abc2d6a0fe99 123 SUPERFAMILY SSF46689 3 70 1.69E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_18040 23df5175aa1d160fb514abc2d6a0fe99 123 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 5.9E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18040 23df5175aa1d160fb514abc2d6a0fe99 123 Gene3D G3DSA:1.10.10.60 1 67 1.3E-25 T 12-10-2018 ABD1_18040 23df5175aa1d160fb514abc2d6a0fe99 123 Gene3D G3DSA:1.10.357.10 69 118 3.7E-5 T 12-10-2018 ABD1_06650 1916b28a80eac77445c6575f38515334 315 Gene3D G3DSA:1.10.10.10 9 74 5.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_06650 1916b28a80eac77445c6575f38515334 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06650 1916b28a80eac77445c6575f38515334 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06650 1916b28a80eac77445c6575f38515334 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06650 1916b28a80eac77445c6575f38515334 315 Pfam PF03466 LysR substrate binding domain 91 306 2.4E-27 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_06650 1916b28a80eac77445c6575f38515334 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 9.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06650 1916b28a80eac77445c6575f38515334 315 SUPERFAMILY SSF53850 92 310 1.05E-30 T 12-10-2018 ABD1_06650 1916b28a80eac77445c6575f38515334 315 Gene3D G3DSA:3.40.190.10 85 190 4.4E-24 T 12-10-2018 ABD1_06650 1916b28a80eac77445c6575f38515334 315 SUPERFAMILY SSF46785 3 83 6.15E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06650 1916b28a80eac77445c6575f38515334 315 Gene3D G3DSA:3.40.190.10 191 279 7.0E-21 T 12-10-2018 ABD1_00360 7fcc77b50973c61d3310bc60fa252e37 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00360 7fcc77b50973c61d3310bc60fa252e37 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00360 7fcc77b50973c61d3310bc60fa252e37 215 SUPERFAMILY SSF46689 12 71 9.75E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_00360 7fcc77b50973c61d3310bc60fa252e37 215 Gene3D G3DSA:1.10.357.10 5 170 1.4E-13 T 12-10-2018 ABD1_00360 7fcc77b50973c61d3310bc60fa252e37 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Gene3D G3DSA:3.10.150.10 1 126 1.9E-35 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Gene3D G3DSA:3.10.150.10 264 382 4.8E-36 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 2.2E-31 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 SUPERFAMILY SSF55979 261 382 3.14E-35 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 SUPERFAMILY SSF55979 131 260 5.65E-21 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Gene3D G3DSA:3.10.150.10 129 263 1.5E-31 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 1.0E-35 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 SMART SM00480 17 378 2.7E-123 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 1.2E-93 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 SUPERFAMILY SSF55979 3 120 9.87E-24 T 12-10-2018 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 259 3.4E-29 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABD1_00020 a415d8c59a0d7d6dccc88961bf17f1f3 382 PIRSF PIRSF000804 1 382 8.3E-107 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABD1_18390 38e727b67a3a7ee5d45ac2429d1de700 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18390 38e727b67a3a7ee5d45ac2429d1de700 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18390 38e727b67a3a7ee5d45ac2429d1de700 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_18390 38e727b67a3a7ee5d45ac2429d1de700 181 Gene3D G3DSA:1.10.357.10 2 181 4.9E-20 T 12-10-2018 ABD1_18390 38e727b67a3a7ee5d45ac2429d1de700 181 SUPERFAMILY SSF46689 5 73 5.64E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_02300 a79050cd4a8da76912ebfbc7b78bbee9 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_02300 a79050cd4a8da76912ebfbc7b78bbee9 398 Pfam PF01098 Cell cycle protein 33 386 3.1E-100 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_02300 a79050cd4a8da76912ebfbc7b78bbee9 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 384 1.1E-122 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_02300 a79050cd4a8da76912ebfbc7b78bbee9 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 38.052 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_31440 63a9f86a15eb90dc2687610b242e27df 138 Pfam PF02627 Carboxymuconolactone decarboxylase family 20 69 2.1E-9 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABD1_31440 63a9f86a15eb90dc2687610b242e27df 138 Gene3D G3DSA:1.20.1290.10 1 138 1.9E-34 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_31440 63a9f86a15eb90dc2687610b242e27df 138 SUPERFAMILY SSF69118 11 137 2.5E-31 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_31440 63a9f86a15eb90dc2687610b242e27df 138 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 26 65 1.7E-9 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABD1_11350 95566f82001d8688499a4a4fc7080d5b 293 Gene3D G3DSA:1.10.10.10 9 91 2.3E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_11350 95566f82001d8688499a4a4fc7080d5b 293 Pfam PF04492 Bacteriophage replication protein O 12 81 1.1E-9 T 12-10-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 SUPERFAMILY SSF53659 3 357 8.45E-113 T 12-10-2018 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 358 6.1E-168 T 12-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 4.7E-83 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 SMART SM01329 6 355 3.6E-169 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_07990 4cccca18a37d1b0e77b99d79925caeae 370 Gene3D G3DSA:3.40.718.10 1 363 3.0E-140 T 12-10-2018 ABD1_05020 9324c8609684cf13d8784c6cbf6a51d7 188 Pfam PF00929 Exonuclease 10 170 5.4E-32 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_05020 9324c8609684cf13d8784c6cbf6a51d7 188 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.403 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 ABD1_05020 9324c8609684cf13d8784c6cbf6a51d7 188 SMART SM00479 8 181 2.4E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_05020 9324c8609684cf13d8784c6cbf6a51d7 188 SUPERFAMILY SSF53098 7 181 8.1E-46 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_05020 9324c8609684cf13d8784c6cbf6a51d7 188 Gene3D G3DSA:3.30.420.10 1 188 4.5E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 Pfam PF00551 Formyl transferase 2 184 2.6E-47 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 35.202 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 Gene3D G3DSA:3.40.50.170 1 213 3.3E-77 T 12-10-2018 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 Pfam PF02911 Formyl transferase, C-terminal domain 211 310 3.6E-24 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 315 1.7E-95 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 SUPERFAMILY SSF50486 214 319 3.92E-27 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 Gene3D G3DSA:3.10.25.10 214 318 7.8E-28 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_33590 a0083ba496c2f6c9376ea02c9cb6332a 320 SUPERFAMILY SSF53328 1 188 1.06E-61 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_07170 beed2f6df9d5aac3780680745fe6f73e 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 2.2E-85 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ABD1_07170 beed2f6df9d5aac3780680745fe6f73e 211 SUPERFAMILY SSF53271 5 206 4.2E-65 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_07170 beed2f6df9d5aac3780680745fe6f73e 211 Gene3D G3DSA:3.40.50.2020 2 207 2.6E-69 T 12-10-2018 ABD1_07170 beed2f6df9d5aac3780680745fe6f73e 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 5.8E-63 T 12-10-2018 ABD1_07170 beed2f6df9d5aac3780680745fe6f73e 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.405 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ABD1_17890 fa53857f4d728b0d8de27674871521ab 528 Pfam PF03321 GH3 auxin-responsive promoter 26 517 7.9E-82 T 12-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 Pfam PF00849 RNA pseudouridylate synthase 123 272 3.6E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 SUPERFAMILY SSF55120 108 345 8.63E-75 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 Gene3D G3DSA:3.10.290.10 34 107 1.9E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 Pfam PF01479 S4 domain 62 95 1.6E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 Gene3D G3DSA:3.30.2350.10 116 347 1.9E-68 T 12-10-2018 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 SMART SM00363 50 107 1.0E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 SUPERFAMILY SSF55174 47 136 1.51E-9 T 12-10-2018 ABD1_07910 e850df76f698dd16afdd4b862003021d 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 4.4E-91 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_00130 dd9e851d402d94ab511bab780c171f3a 362 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 360 1.2E-126 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ABD1_00130 dd9e851d402d94ab511bab780c171f3a 362 Gene3D G3DSA:3.30.420.40 2 357 2.9E-122 T 12-10-2018 ABD1_00130 dd9e851d402d94ab511bab780c171f3a 362 SUPERFAMILY SSF53067 53 334 1.05E-22 T 12-10-2018 ABD1_00130 dd9e851d402d94ab511bab780c171f3a 362 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 362 36.696 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ABD1_00130 dd9e851d402d94ab511bab780c171f3a 362 Gene3D G3DSA:3.30.420.40 127 322 2.9E-122 T 12-10-2018 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 8.9E-15 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 8.9E-15 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 8.9E-15 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 8.9E-15 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 5.6E-17 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 12.785 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 6.7E-19 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 Gene3D G3DSA:1.20.5.1030 88 144 9.5E-16 T 12-10-2018 IPR038379 SecE superfamily ABD1_02580 d89b9689e9aa9bc51e9bac912fa2fca5 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 Gene3D G3DSA:3.30.70.640 1 146 1.2E-47 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 Pfam PF00994 Probable molybdopterin binding domain 151 291 8.7E-30 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 Pfam PF01967 MoaC family 1 136 1.5E-41 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 149 287 1.9E-27 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 SMART SM00852 151 293 1.0E-20 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 SUPERFAMILY SSF55040 1 140 1.7E-44 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 PIRSF PIRSF036594 1 304 1.9E-65 T 12-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 Gene3D G3DSA:3.40.980.10 147 302 4.6E-45 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABD1_20230 c4433718bd06b2f9d68eed855b7d4fd7 307 SUPERFAMILY SSF53218 147 298 1.1E-36 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52335 946 1073 3.4E-41 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52440 557 675 2.16E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.0E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.20 554 662 7.1E-49 T 12-10-2018 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF56059 128 401 1.71E-111 T 12-10-2018 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.9E-36 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.0E-74 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.57 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.179 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SMART SM00851 961 1047 2.3E-35 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.20 1 116 1.6E-51 T 12-10-2018 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 547 1.9E-38 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.30.470.20 665 935 2.3E-120 T 12-10-2018 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.30.470.20 119 403 1.6E-131 T 12-10-2018 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02142 MGS-like domain 962 1047 1.7E-21 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.1380 943 1075 7.5E-37 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF48108 396 554 4.05E-53 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:1.10.1030.10 404 553 6.1E-48 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SMART SM01096 424 547 6.0E-71 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52440 1 127 1.06E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_26380 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF56059 673 933 5.83E-104 T 12-10-2018 ABD1_28560 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 101 1.6E-25 T 12-10-2018 IPR003849 Preprotein translocase YajC ABD1_28560 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 2.4E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC ABD1_28560 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.4E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC ABD1_28560 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 Pfam PF02699 Preprotein translocase subunit 24 97 2.4E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC ABD1_28560 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 SMART SM01323 19 101 1.8E-36 T 12-10-2018 IPR003849 Preprotein translocase YajC ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 SMART SM00422 1 70 1.2E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 Gene3D G3DSA:1.10.1660.10 1 136 3.9E-29 T 12-10-2018 ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 Pfam PF13411 MerR HTH family regulatory protein 1 69 1.5E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 SUPERFAMILY SSF46955 1 113 1.14E-27 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_18540 ec1fd21142e2fd322ece2025c7d5f234 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Pfam PF00732 GMC oxidoreductase 6 304 4.3E-97 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 SUPERFAMILY SSF51905 4 539 1.13E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 SUPERFAMILY SSF54373 299 481 1.47E-64 T 12-10-2018 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 541 7.2E-284 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Gene3D G3DSA:4.10.450.10 39 202 4.7E-174 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 PIRSF PIRSF000137 1 543 1.2E-137 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 4 552 59.613 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Pfam PF05199 GMC oxidoreductase 397 531 4.3E-41 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Gene3D G3DSA:3.50.50.60 5 535 4.7E-174 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Gene3D G3DSA:3.30.410.40 155 478 4.7E-174 T 12-10-2018 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 Gene3D G3DSA:1.10.1220.110 100 154 4.7E-174 T 12-10-2018 ABD1_08790 b6940b58dd75c6a0a8411eacf4c839d5 552 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 SMART SM01008 30 137 4.5E-38 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 775 0.0 T 12-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Gene3D G3DSA:3.30.365.10 151 407 1.7E-291 T 12-10-2018 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 SUPERFAMILY SSF56003 138 775 1.44E-201 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Gene3D G3DSA:3.30.365.10 138 774 1.7E-291 T 12-10-2018 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Gene3D G3DSA:3.30.365.10 459 606 1.7E-291 T 12-10-2018 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 SUPERFAMILY SSF54665 9 135 1.7E-36 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 135 1.7E-24 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Gene3D G3DSA:3.90.1170.50 17 137 1.7E-291 T 12-10-2018 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Gene3D G3DSA:3.30.365.10 185 279 1.7E-291 T 12-10-2018 ABD1_23590 5f367a97d9102146b330c0ec2921cf7f 791 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 708 1.3E-198 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Gene3D G3DSA:3.30.300.30 516 645 1.0E-29 T 12-10-2018 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 SUPERFAMILY SSF56801 19 644 4.45E-186 T 12-10-2018 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Pfam PF00501 AMP-binding enzyme 81 520 2.5E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Gene3D G3DSA:3.40.50.12780 48 513 5.4E-108 T 12-10-2018 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 641 1.2E-302 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.088 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 4.3E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_32040 d9dfbd1c00aeb6c70f81ff671c442319 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 1.2E-19 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ABD1_16700 75e73588a17ceb3be07bdf37818d2ae1 124 SUPERFAMILY SSF74653 32 123 4.51E-9 T 12-10-2018 ABD1_16700 75e73588a17ceb3be07bdf37818d2ae1 124 Gene3D G3DSA:3.30.1150.10 26 122 1.9E-18 T 12-10-2018 ABD1_16700 75e73588a17ceb3be07bdf37818d2ae1 124 Pfam PF13103 TonB C terminal 38 118 1.4E-7 T 12-10-2018 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 SUPERFAMILY SSF53383 76 470 5.61E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 Gene3D G3DSA:1.10.10.10 6 83 3.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 Gene3D G3DSA:3.40.640.10 98 465 2.3E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 82 2.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 Pfam PF00155 Aminotransferase class I and II 136 466 2.0E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 SUPERFAMILY SSF46785 15 85 5.46E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.8E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.8E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_02010 5713ee8a6176b827c2126081a58c78e7 470 SMART SM00345 23 82 5.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_04030 88017634268c1d6ecc872e8b8b3859fb 210 Pfam PF01810 LysE type translocator 16 207 3.1E-28 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_04030 88017634268c1d6ecc872e8b8b3859fb 210 PIRSF PIRSF006324 1 209 4.6E-45 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 SUPERFAMILY SSF56784 1 217 2.59E-54 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 Gene3D G3DSA:1.10.150.240 16 84 4.5E-51 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 1.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 178 7.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 184 2.0E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 1.8E-35 T 12-10-2018 ABD1_00330 cb84b3d8ccf9c999b8c1257a56fa374e 232 Gene3D G3DSA:3.40.50.1000 4 190 4.5E-51 T 12-10-2018 IPR023214 HAD superfamily ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 621 2.4E-8 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 SUPERFAMILY SSF51905 2 186 1.14E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Gene3D G3DSA:3.50.50.60 106 241 2.4E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 280 4.6E-50 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 2.9E-8 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.9E-8 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 101 110 2.9E-8 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.9E-8 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 1.2E-14 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.2E-14 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 1.2E-14 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 1.2E-14 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Gene3D G3DSA:3.50.50.60 4 278 2.4E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Gene3D G3DSA:3.30.413.10 629 793 7.8E-33 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Gene3D G3DSA:1.10.10.1100 421 475 1.4E-11 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 421 469 4.6E-10 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 746 4.9E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 SUPERFAMILY SSF56014 631 804 8.37E-50 T 12-10-2018 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 3 798 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PIRSF PIRSF037149 1 836 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 SUPERFAMILY SSF51905 145 304 1.3E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 7.0E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 7.0E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_20310 7322a6d8b02f8c330cf9b3318ed488b6 848 SUPERFAMILY SSF55124 500 639 3.27E-24 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 SUPERFAMILY SSF63411 747 913 2.33E-26 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 SUPERFAMILY SSF63411 31 247 1.07E-50 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Gene3D G3DSA:3.30.830.10 501 713 4.3E-27 T 12-10-2018 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Gene3D G3DSA:3.30.830.10 29 252 5.8E-55 T 12-10-2018 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Gene3D G3DSA:3.30.830.10 262 453 8.1E-21 T 12-10-2018 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Pfam PF05193 Peptidase M16 inactive domain 666 845 1.7E-25 T 12-10-2018 IPR007863 Peptidase M16, C-terminal ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Pfam PF05193 Peptidase M16 inactive domain 202 372 2.2E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 SUPERFAMILY SSF63411 261 431 8.5E-16 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 SUPERFAMILY SSF63411 488 716 1.54E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Gene3D G3DSA:3.30.830.10 714 915 1.0E-35 T 12-10-2018 ABD1_24580 87f55a4efbe7e23c58d4f3e7caca5600 920 Pfam PF00675 Insulinase (Peptidase family M16) 63 188 5.0E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal ABD1_17810 d6870a7b4e3a1edd2a708f5a480419e1 210 Gene3D G3DSA:1.10.357.10 22 209 3.5E-21 T 12-10-2018 ABD1_17810 d6870a7b4e3a1edd2a708f5a480419e1 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 85 7.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_17810 d6870a7b4e3a1edd2a708f5a480419e1 210 SUPERFAMILY SSF46689 40 97 1.95E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17810 d6870a7b4e3a1edd2a708f5a480419e1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 54 7.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_17810 d6870a7b4e3a1edd2a708f5a480419e1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 62 85 7.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_32910 65feef3655325e08c78aa2e33c27d1ca 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 5.4E-54 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32910 65feef3655325e08c78aa2e33c27d1ca 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.988 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32910 65feef3655325e08c78aa2e33c27d1ca 156 SUPERFAMILY SSF52121 11 156 2.49E-59 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32910 65feef3655325e08c78aa2e33c27d1ca 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 4.6E-56 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32910 65feef3655325e08c78aa2e33c27d1ca 156 Gene3D G3DSA:3.40.50.960 3 156 1.1E-58 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 152 7.0E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 Pfam PF00593 TonB dependent receptor 224 706 1.3E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 Gene3D G3DSA:2.170.130.10 40 162 3.4E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 707 1.3E-90 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 SUPERFAMILY SSF56935 50 707 1.62E-119 T 12-10-2018 ABD1_32350 c4cc1e9d228916e11e7cf82c776b31f6 707 Gene3D G3DSA:2.40.170.20 163 707 7.3E-102 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_24510 5e55e287a1fc4d3d55be4e1ddc0da2d2 234 Gene3D G3DSA:1.10.1200.10 164 234 2.7E-10 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_29580 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-19 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29580 e70fbba53c6ddc281f3eab06dd2f8ab1 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.0E-18 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29580 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.717 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29580 e70fbba53c6ddc281f3eab06dd2f8ab1 65 SUPERFAMILY SSF46561 1 63 4.45E-19 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29580 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Gene3D G3DSA:1.10.287.310 1 63 2.8E-22 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 14 431 36.284 T 12-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 48 63 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 Pfam PF00375 Sodium:dicarboxylate symporter family 21 413 1.3E-106 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 SUPERFAMILY SSF118215 21 414 1.27E-115 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 Gene3D G3DSA:1.10.3860.10 8 431 4.2E-119 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.2E-32 T 12-10-2018 ABD1_21920 9b211f71db3b05bced0ac59600b29931 432 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_29210 3dabfda8be41f6aa550803f38e38c720 415 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 278 6.7E-59 T 12-10-2018 IPR017039 Virulence factor BrkB ABD1_29210 3dabfda8be41f6aa550803f38e38c720 415 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 302 21.268 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial ABD1_29210 3dabfda8be41f6aa550803f38e38c720 415 Pfam PF03631 Virulence factor BrkB 30 277 3.9E-52 T 12-10-2018 IPR017039 Virulence factor BrkB ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 Gene3D G3DSA:1.10.580.10 38 364 1.3E-126 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 366 1.2E-113 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 Gene3D G3DSA:1.10.230.10 233 331 1.3E-126 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PIRSF PIRSF001369 11 385 3.3E-109 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 185 200 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 317 333 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 207 235 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 260 280 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 135 148 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 337 351 9.1E-37 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 SUPERFAMILY SSF48256 19 375 8.77E-122 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABD1_00770 a6f13dfa4e87a9dbc14053c479bc7597 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 6.0E-152 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 Pfam PF12704 MacB-like periplasmic core domain 286 505 2.6E-40 T 12-10-2018 IPR025857 MacB-like periplasmic core domain ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 Gene3D G3DSA:3.40.50.300 4 288 1.6E-68 T 12-10-2018 ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 Pfam PF02687 FtsX-like permease family 568 657 3.1E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 SUPERFAMILY SSF52540 6 227 2.27E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 Pfam PF00005 ABC transporter 26 174 1.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 SMART SM00382 35 229 6.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_05060 356dccdaf61ac5ce8dce007eef250f5b 664 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 SUPERFAMILY SSF46689 2 65 1.39E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 Gene3D G3DSA:1.10.357.10 1 184 1.2E-37 T 12-10-2018 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.3E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_14980 8964073921bcf9f1cab8444dcc85c9cd 186 SUPERFAMILY SSF48498 76 159 2.09E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Gene3D G3DSA:3.90.740.10 215 258 2.1E-6 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 892 956 1.7E-21 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 SUPERFAMILY SSF46589 892 956 2.2E-16 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 SUPERFAMILY SSF52374 10 647 1.92E-139 T 12-10-2018 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 939 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Gene3D G3DSA:3.40.50.620 337 561 7.7E-74 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Gene3D G3DSA:1.10.730.10 587 825 1.4E-70 T 12-10-2018 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 637 1.0E-216 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Pfam PF08264 Anticodon-binding domain of tRNA 680 828 2.1E-38 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Gene3D G3DSA:3.40.50.620 11 214 3.2E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 SUPERFAMILY SSF50677 197 369 2.88E-56 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Gene3D G3DSA:1.10.287.380 885 957 2.9E-22 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 PRINTS PR00986 Valyl-tRNA synthetase signature 243 260 9.5E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 9.5E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 PRINTS PR00986 Valyl-tRNA synthetase signature 375 388 9.5E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 9.5E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 9.5E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 957 16.078 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABD1_26900 46b945a0cb4d6acaec993e721657bf91 959 SUPERFAMILY SSF47323 648 907 6.17E-67 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Gene3D G3DSA:2.60.40.1840 450 556 4.9E-26 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 SUPERFAMILY SSF63737 12 199 3.79E-40 T 12-10-2018 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 SUPERFAMILY SSF55486 211 455 1.14E-71 T 12-10-2018 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Gene3D G3DSA:1.10.1740.60 201 285 2.0E-38 T 12-10-2018 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Gene3D G3DSA:1.25.50.10 557 867 1.4E-72 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Gene3D G3DSA:2.60.40.1730 22 200 3.3E-67 T 12-10-2018 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 866 3.6E-72 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Gene3D G3DSA:1.10.390.10 286 449 6.6E-59 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 865 8.8E-304 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Pfam PF01433 Peptidase family M1 domain 214 443 3.7E-54 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 6.1E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 6.1E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 6.1E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 6.1E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_20930 e4b000bfe7e725c5460f984e7468c5eb 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 555 6.3E-24 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 425 1.3E-131 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 Pfam PF03952 Enolase, N-terminal domain 4 134 1.4E-57 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 Gene3D G3DSA:3.30.390.10 1 127 2.9E-54 T 12-10-2018 IPR029017 Enolase-like, N-terminal ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 SUPERFAMILY SSF51604 142 416 1.3E-125 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 367 384 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 164 177 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 37 51 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 338 352 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 107 123 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 315 326 1.4E-42 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 Gene3D G3DSA:3.20.20.120 128 429 9.6E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 SMART SM01192 142 427 1.4E-213 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 SMART SM01193 4 134 1.9E-91 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 5.6E-201 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 Hamap MF_00318 Enolase [eno]. 2 415 44.088 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 SUPERFAMILY SSF54826 4 137 1.48E-54 T 12-10-2018 ABD1_19170 6934bd1eabbacd9025867a813d640fe4 429 PIRSF PIRSF001400 1 427 1.9E-190 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_01270 0c3a7265af0211d9fd3f655f2441b255 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 127 5.4E-18 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB ABD1_01270 0c3a7265af0211d9fd3f655f2441b255 130 PIRSF PIRSF005610 1 126 2.8E-8 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 PRINTS PR01021 OMPA domain signature 264 279 6.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 PRINTS PR01021 OMPA domain signature 234 256 6.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 PRINTS PR01021 OMPA domain signature 279 295 6.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 Gene3D G3DSA:3.30.1330.60 218 339 3.2E-45 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 SUPERFAMILY SSF103088 212 333 4.45E-34 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 SUPERFAMILY SSF56925 31 198 1.81E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 Gene3D G3DSA:2.40.160.20 13 193 5.8E-18 T 12-10-2018 ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 Pfam PF00691 OmpA family 233 329 2.0E-23 T 12-10-2018 IPR006665 OmpA-like domain ABD1_27860 c6d841e5c05751b0a045fb72976b202f 356 Pfam PF13505 Outer membrane protein beta-barrel domain 7 191 1.9E-11 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 927 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:1.20.1580.10 694 832 6.4E-142 T 12-10-2018 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 SUPERFAMILY SSF52540 6 570 7.08E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:3.40.50.300 618 938 6.4E-142 T 12-10-2018 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:3.30.190.20 132 245 2.0E-245 T 12-10-2018 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 SUPERFAMILY SSF52540 617 911 2.56E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:1.10.8.280 288 404 2.0E-245 T 12-10-2018 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Pfam PF00005 ABC transporter 625 862 1.4E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.387 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:3.40.50.300 8 596 2.0E-245 T 12-10-2018 ABD1_31900 a590b8f671c4a08caf09c60d3d947586 944 Gene3D G3DSA:1.20.1580.10 92 493 2.0E-245 T 12-10-2018 ABD1_01650 583399e6e689a0f4f71c60226f603693 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 35.545 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 ABD1_01650 583399e6e689a0f4f71c60226f603693 189 SUPERFAMILY SSF55821 4 187 1.71E-43 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABD1_01650 583399e6e689a0f4f71c60226f603693 189 Pfam PF01300 Telomere recombination 11 187 1.8E-34 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 ABD1_01650 583399e6e689a0f4f71c60226f603693 189 Gene3D G3DSA:3.90.870.10 1 188 5.7E-54 T 12-10-2018 ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 SUPERFAMILY SSF56601 80 328 8.09E-57 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 85 311 5.3E-60 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 Gene3D G3DSA:3.40.710.10 74 330 4.1E-67 T 12-10-2018 ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 196 209 1.4E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 128 1.4E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_02210 adf009f63120b0be1c4ee28551684c30 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 169 186 1.4E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_22960 870b095f9523045009bdd3b665931148 87 Gene3D G3DSA:3.30.70.20 2 81 2.6E-31 T 12-10-2018 ABD1_22960 870b095f9523045009bdd3b665931148 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_22960 870b095f9523045009bdd3b665931148 87 SUPERFAMILY SSF54862 5 73 1.5E-17 T 12-10-2018 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50104 2 63 4.31E-21 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50249 132 189 2.74E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.40.50.140 66 131 2.9E-30 T 12-10-2018 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50249 69 130 9.42E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 9.3E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.30.30.30 1 65 2.6E-29 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.8E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 49.141 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 PIRSF PIRSF005901 2 189 1.5E-64 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 1.3E-77 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 5.8E-26 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 SMART SM01185 69 125 3.7E-27 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 SMART SM00841 133 188 1.9E-31 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABD1_24090 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.40.50.140 132 189 1.4E-27 T 12-10-2018 ABD1_04380 021c7b6fb2a3d9006876b48da259b75b 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.3E-19 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABD1_04380 021c7b6fb2a3d9006876b48da259b75b 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 71 20.38 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABD1_04380 021c7b6fb2a3d9006876b48da259b75b 72 Pfam PF02416 mttA/Hcf106 family 4 49 4.2E-13 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABD1_02880 ba00360483b136a433cf04d85f2a7dd6 264 SUPERFAMILY SSF54637 118 262 4.75E-23 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_02880 ba00360483b136a433cf04d85f2a7dd6 264 Pfam PF13622 Thioesterase-like superfamily 19 262 2.5E-41 T 12-10-2018 ABD1_02880 ba00360483b136a433cf04d85f2a7dd6 264 Gene3D G3DSA:3.10.129.90 8 263 1.9E-60 T 12-10-2018 ABD1_02880 ba00360483b136a433cf04d85f2a7dd6 264 SUPERFAMILY SSF54637 6 107 5.33E-17 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_16880 4b0eebb1f88c130ec551126038c12962 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 387 4.8E-50 T 12-10-2018 IPR000160 GGDEF domain ABD1_16880 4b0eebb1f88c130ec551126038c12962 401 Gene3D G3DSA:3.30.70.270 212 391 7.5E-57 T 12-10-2018 ABD1_16880 4b0eebb1f88c130ec551126038c12962 401 SMART SM00267 215 391 7.1E-69 T 12-10-2018 IPR000160 GGDEF domain ABD1_16880 4b0eebb1f88c130ec551126038c12962 401 SUPERFAMILY SSF55073 231 390 2.35E-49 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_16880 4b0eebb1f88c130ec551126038c12962 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 390 5.3E-50 T 12-10-2018 IPR000160 GGDEF domain ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 Gene3D G3DSA:3.40.50.300 189 475 6.2E-103 T 12-10-2018 ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 SUPERFAMILY SSF52540 210 461 1.89E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 1.9E-164 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 1.2E-28 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 Gene3D G3DSA:1.10.860.10 23 187 2.7E-43 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 6.9E-109 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ABD1_21730 3181b8c87b9b39a606a31dce244adfcc 481 SUPERFAMILY SSF48024 29 141 8.11E-30 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 Gene3D G3DSA:3.30.160.270 377 549 1.2E-52 T 12-10-2018 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 SUPERFAMILY SSF110921 442 549 2.75E-29 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 SUPERFAMILY SSF89000 388 438 9.02E-16 T 12-10-2018 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 1.6E-229 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 52.415 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 Pfam PF00682 HMGL-like 33 313 6.0E-77 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 SMART SM00917 422 550 1.6E-27 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 SUPERFAMILY SSF51569 22 330 3.11E-99 T 12-10-2018 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 Gene3D G3DSA:3.20.20.70 10 376 6.3E-154 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_04450 f373a3975d687f8088ec4e28dc2d25c2 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 2.2E-24 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABD1_06010 175289e2628e65fb436b36a42c474e67 416 Gene3D G3DSA:1.20.1250.20 10 401 5.7E-26 T 12-10-2018 ABD1_06010 175289e2628e65fb436b36a42c474e67 416 SUPERFAMILY SSF103473 12 401 7.32E-33 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_06010 175289e2628e65fb436b36a42c474e67 416 Pfam PF05977 Transmembrane secretion effector 6 396 2.4E-27 T 12-10-2018 IPR010290 Transmembrane secretion effector ABD1_26720 37869f1764b1765fc08af5951a1e8f09 157 Pfam PF00588 SpoU rRNA Methylase family 2 145 2.5E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABD1_26720 37869f1764b1765fc08af5951a1e8f09 157 PIRSF PIRSF029256 1 157 3.0E-60 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABD1_26720 37869f1764b1765fc08af5951a1e8f09 157 Gene3D G3DSA:3.40.1280.10 1 156 2.2E-58 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_26720 37869f1764b1765fc08af5951a1e8f09 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 30.532 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABD1_26720 37869f1764b1765fc08af5951a1e8f09 157 SUPERFAMILY SSF75217 2 155 5.49E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 Pfam PF00119 ATP synthase A chain 55 285 1.2E-56 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.994 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 286 1.1E-41 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 Gene3D G3DSA:1.20.120.220 102 291 1.2E-59 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01510 dd302c792db3538a42a00026d6728f9e 291 SUPERFAMILY SSF81336 103 285 6.15E-42 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SUPERFAMILY SSF82282 6 396 8.11E-118 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:3.10.196.10 913 1223 3.4E-125 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 PIRSF PIRSF000381 1 1196 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SUPERFAMILY SSF51717 353 621 2.75E-90 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1209 2.1E-112 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SUPERFAMILY SSF47644 653 740 7.19E-28 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:3.20.20.330 2 336 3.5E-128 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SMART SM01018 658 741 8.6E-43 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:1.10.1240.10 650 738 6.8E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:3.20.20.20 337 645 1.7E-132 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Pfam PF02574 Homocysteine S-methyltransferase 16 322 2.3E-79 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SUPERFAMILY SSF52242 744 895 1.18E-44 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Pfam PF00809 Pterin binding enzyme 357 595 1.2E-56 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Pfam PF02607 B12 binding domain 660 733 9.3E-24 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 TIGRFAM TIGR02082 metH: methionine synthase 12 1193 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:1.10.288.10 938 1093 3.4E-125 T 12-10-2018 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 SUPERFAMILY SSF56507 907 1224 8.89E-115 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Gene3D G3DSA:3.40.50.280 745 897 8.8E-55 T 12-10-2018 ABD1_09250 9e1e4794619d1cf7a688ecac68846d1d 1228 Pfam PF02310 B12 binding domain 749 842 4.6E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABD1_29310 b6c68178caef8727c1af08d4da5aaa96 69 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 47 3.3E-17 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 ABD1_29310 b6c68178caef8727c1af08d4da5aaa96 69 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 45 1.2E-17 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 Pfam PF00578 AhpC/TSA family 6 135 9.0E-31 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 PIRSF PIRSF000239 1 209 1.0E-78 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 SUPERFAMILY SSF52833 3 209 6.23E-69 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 2.7E-13 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 Gene3D G3DSA:3.40.30.10 1 145 5.2E-50 T 12-10-2018 ABD1_28070 777c3346c94da4d168480bb8d5d5b972 213 Gene3D G3DSA:3.30.1020.10 146 210 4.3E-28 T 12-10-2018 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 Pfam PF00108 Thiolase, N-terminal domain 4 268 2.0E-77 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 PIRSF PIRSF000429 1 402 2.0E-134 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 8.2E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 2.3E-205 T 12-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 SUPERFAMILY SSF53901 3 276 4.26E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 Pfam PF02803 Thiolase, C-terminal domain 276 399 2.1E-46 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 SUPERFAMILY SSF53901 277 400 7.15E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 Gene3D G3DSA:3.40.47.10 6 282 1.8E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 Gene3D G3DSA:3.40.47.10 141 398 1.8E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_13530 5ff69e4f38eb1ecb88ce1e71de145421 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABD1_29690 a6a496b09978266260778ee693597b06 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 394 6.8E-73 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_29690 a6a496b09978266260778ee693597b06 396 Gene3D G3DSA:3.40.640.10 2 258 4.4E-51 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_29690 a6a496b09978266260778ee693597b06 396 Gene3D G3DSA:3.90.1150.10 261 396 1.1E-31 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_29690 a6a496b09978266260778ee693597b06 396 PIRSF PIRSF001434 1 396 6.7E-103 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABD1_29690 a6a496b09978266260778ee693597b06 396 SUPERFAMILY SSF53383 6 394 7.23E-72 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.30.70.260 331 410 4.6E-6 T 12-10-2018 ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.40.50.1100 16 316 8.3E-115 T 12-10-2018 ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.40.50.1100 59 155 8.3E-115 T 12-10-2018 ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 SUPERFAMILY SSF53686 10 360 1.18E-93 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 311 4.1E-77 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_27380 aba43f36e67349d9b6fc6f5826ed1bea 411 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 30 407 9.4E-135 T 12-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABD1_08010 fa3be58f8caeda163405a2b34df19663 324 Pfam PF07859 alpha/beta hydrolase fold 87 291 3.1E-66 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_08010 fa3be58f8caeda163405a2b34df19663 324 Gene3D G3DSA:3.40.50.1820 5 321 3.2E-84 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_08010 fa3be58f8caeda163405a2b34df19663 324 SUPERFAMILY SSF53474 54 318 1.04E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_08010 fa3be58f8caeda163405a2b34df19663 324 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 5.0E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 5.0E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 5.0E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 5.0E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 5.0E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PIRSF PIRSF000097 102 265 4.4E-36 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 PIRSF PIRSF000097 1 105 5.6E-34 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 SUPERFAMILY SSF51430 2 262 2.36E-81 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 Gene3D G3DSA:3.20.20.100 1 267 5.4E-92 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABD1_33430 4968a12a02cf7eeb73d46849c28f8314 267 Pfam PF00248 Aldo/keto reductase family 8 251 1.1E-49 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 SUPERFAMILY SSF52540 2 183 1.34E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 SMART SM00072 2 184 3.5E-63 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 Gene3D G3DSA:3.40.50.300 7 180 5.7E-66 T 12-10-2018 ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 Gene3D G3DSA:3.30.63.10 34 93 5.7E-66 T 12-10-2018 ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.584 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 Pfam PF00625 Guanylate kinase 6 182 3.4E-52 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABD1_30580 f967cf2a7779f5cea4c8fb591fc17edd 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.0E-73 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 SUPERFAMILY SSF100950 225 494 6.95E-85 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 494 1.1E-236 T 12-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.40.1080.20 336 477 5.7E-39 T 12-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 5.0E-32 T 12-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.30.750.70 248 329 6.4E-6 T 12-10-2018 ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.40.1080.10 13 187 1.2E-16 T 12-10-2018 ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 7.0E-41 T 12-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ABD1_31110 19c49ef48fe806b196aac37e0a3dd69c 504 SUPERFAMILY SSF100950 4 222 7.44E-75 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_09000 ae1ccf9189da13c650a1eb876e83c969 355 Gene3D G3DSA:3.30.530.90 151 340 3.9E-7 T 12-10-2018 ABD1_09000 ae1ccf9189da13c650a1eb876e83c969 355 Pfam PF00355 Rieske [2Fe-2S] domain 22 112 1.0E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_09000 ae1ccf9189da13c650a1eb876e83c969 355 Gene3D G3DSA:2.102.10.10 19 150 8.7E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_09000 ae1ccf9189da13c650a1eb876e83c969 355 SUPERFAMILY SSF55961 136 334 2.53E-41 T 12-10-2018 ABD1_09000 ae1ccf9189da13c650a1eb876e83c969 355 SUPERFAMILY SSF50022 9 132 1.57E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_05750 94e35b48ffd3cbcc844b13183c68ba91 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 477 9.8E-182 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ABD1_05750 94e35b48ffd3cbcc844b13183c68ba91 484 PIRSF PIRSF000204 3 481 6.8E-189 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 ABD1_05750 94e35b48ffd3cbcc844b13183c68ba91 484 Gene3D G3DSA:3.40.50.1220 301 480 1.2E-81 T 12-10-2018 ABD1_05750 94e35b48ffd3cbcc844b13183c68ba91 484 SUPERFAMILY SSF52467 308 480 6.21E-74 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_26560 68e3b34192c08cafe5e519cf4e562013 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 2.5E-34 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 ABD1_26560 68e3b34192c08cafe5e519cf4e562013 121 PIRSF PIRSF000169 1 121 1.6E-40 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 ABD1_26560 68e3b34192c08cafe5e519cf4e562013 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 109 6.5E-7 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26560 68e3b34192c08cafe5e519cf4e562013 121 Gene3D G3DSA:1.20.1300.10 1 120 3.8E-30 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26560 68e3b34192c08cafe5e519cf4e562013 121 SUPERFAMILY SSF81343 4 119 2.62E-26 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 8.8E-105 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 Pfam PF00231 ATP synthase 3 288 9.1E-95 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 Gene3D G3DSA:1.10.287.80 6 285 2.5E-103 T 12-10-2018 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 SUPERFAMILY SSF52943 2 289 9.55E-93 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 2.9E-34 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 2.9E-34 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.9E-34 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.9E-34 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 36.098 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01560 edb4d42863d935255ef6cf3f6de65e2d 289 Gene3D G3DSA:3.40.1380.10 61 208 2.5E-103 T 12-10-2018 ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 SUPERFAMILY SSF52540 8 252 4.24E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 SMART SM00382 31 230 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 Gene3D G3DSA:3.40.50.300 3 257 1.8E-81 T 12-10-2018 ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 Pfam PF00005 ABC transporter 22 182 5.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_22980 e8aceec417a0cd98d788d22b442314e3 258 PIRSF PIRSF039085 3 258 1.9E-119 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 363 2.1E-6 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Pfam PF13438 Domain of unknown function (DUF4113) 381 431 2.0E-12 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Pfam PF00817 impB/mucB/samB family 13 160 4.0E-32 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 SUPERFAMILY SSF56672 9 248 8.9E-59 T 12-10-2018 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Gene3D G3DSA:2.30.40.20 18 81 1.3E-37 T 12-10-2018 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Gene3D G3DSA:3.30.70.270 12 165 1.3E-37 T 12-10-2018 ABD1_20340 efc11a4a394449bdb216f98e035d07e1 442 Gene3D G3DSA:1.10.150.20 180 243 1.3E-6 T 12-10-2018 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 Gene3D G3DSA:3.20.20.210 1 354 9.2E-144 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 144 160 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 353 5.3E-125 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 354 45.9 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 354 1.5E-127 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABD1_01140 f1d045c9158244516a5875f96f7447e8 354 SUPERFAMILY SSF51726 5 354 6.8E-107 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_05160 99b3ef9fa4578af0bec86f2d33445c9b 187 Gene3D G3DSA:1.10.357.10 9 180 1.6E-20 T 12-10-2018 ABD1_05160 99b3ef9fa4578af0bec86f2d33445c9b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_05160 99b3ef9fa4578af0bec86f2d33445c9b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_05160 99b3ef9fa4578af0bec86f2d33445c9b 187 SUPERFAMILY SSF46689 13 74 5.64E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_05160 99b3ef9fa4578af0bec86f2d33445c9b 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 9.6E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SUPERFAMILY SSF55785 121 246 1.13E-10 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SMART SM00052 431 678 9.2E-60 T 12-10-2018 IPR001633 EAL domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SUPERFAMILY SSF55785 13 119 2.27E-9 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 420 1.2E-36 T 12-10-2018 IPR000160 GGDEF domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Gene3D G3DSA:3.30.450.20 7 118 1.1E-10 T 12-10-2018 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SMART SM00267 248 421 1.6E-50 T 12-10-2018 IPR000160 GGDEF domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Pfam PF00563 EAL domain 439 671 6.1E-54 T 12-10-2018 IPR001633 EAL domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Gene3D G3DSA:3.20.20.450 436 695 9.0E-68 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 415 1.7E-41 T 12-10-2018 IPR000160 GGDEF domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Pfam PF08447 PAS fold 48 105 4.3E-6 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SUPERFAMILY SSF141868 440 685 3.79E-64 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Gene3D G3DSA:3.30.70.270 257 435 7.5E-50 T 12-10-2018 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Pfam PF08448 PAS fold 141 249 1.7E-13 T 12-10-2018 IPR013656 PAS fold-4 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 Gene3D G3DSA:3.30.450.20 125 256 1.7E-11 T 12-10-2018 ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SMART SM00091 8 73 2.9E-4 T 12-10-2018 IPR000014 PAS domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SMART SM00091 134 201 6.7 T 12-10-2018 IPR000014 PAS domain ABD1_19720 7dc6ff50422322ec759e161f71b5caab 697 SUPERFAMILY SSF55073 264 423 3.92E-44 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 Gene3D G3DSA:3.40.1190.20 1 307 1.2E-89 T 12-10-2018 IPR029056 Ribokinase-like ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 1.5E-99 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 Pfam PF00294 pfkB family carbohydrate kinase 13 291 1.5E-45 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 305 2.6E-101 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 SUPERFAMILY SSF53613 4 291 8.57E-63 T 12-10-2018 IPR029056 Ribokinase-like ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 PIRSF PIRSF000535 1 308 2.2E-86 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABD1_19680 d578bef7ae8687a7f6f81a2c6cfd386c 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 3.0E-31 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 Gene3D G3DSA:3.30.950.10 112 231 1.0E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 PIRSF PIRSF005917 1 278 1.5E-100 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 7.2E-84 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 SUPERFAMILY SSF53790 4 223 7.2E-81 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 Gene3D G3DSA:3.40.1010.10 1 111 2.0E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABD1_10670 6e68076a443cfcc84c36878c7f99af75 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 37.006 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABD1_23350 78245a56779c3b020dada45552d534d8 460 SUPERFAMILY SSF51735 197 373 3.29E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_23350 78245a56779c3b020dada45552d534d8 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 SMART SM00997 197 372 5.0E-86 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 1.8E-72 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 2.4E-58 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Gene3D G3DSA:3.40.50.1480 8 203 8.3E-92 T 12-10-2018 ABD1_23350 78245a56779c3b020dada45552d534d8 460 PIRSF PIRSF001109 1 460 1.9E-180 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Gene3D G3DSA:3.40.50.720 204 369 2.3E-68 T 12-10-2018 ABD1_23350 78245a56779c3b020dada45552d534d8 460 SMART SM00996 10 459 4.8E-278 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 1.0E-158 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Gene3D G3DSA:3.40.50.1480 370 460 4.2E-32 T 12-10-2018 ABD1_23350 78245a56779c3b020dada45552d534d8 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 45.505 T 12-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 ABD1_23350 78245a56779c3b020dada45552d534d8 460 SUPERFAMILY SSF52283 8 460 4.53E-110 T 12-10-2018 ABD1_02340 206b789eb48cbadf7938c8dbf8846d61 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 196 6.8E-42 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 ABD1_02340 206b789eb48cbadf7938c8dbf8846d61 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_02340 206b789eb48cbadf7938c8dbf8846d61 208 Pfam PF00293 NUDIX domain 55 185 3.9E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_02340 206b789eb48cbadf7938c8dbf8846d61 208 Gene3D G3DSA:3.90.79.10 4 205 1.2E-53 T 12-10-2018 ABD1_02340 206b789eb48cbadf7938c8dbf8846d61 208 SUPERFAMILY SSF55811 17 199 1.49E-41 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 Gene3D G3DSA:3.20.20.70 12 344 3.2E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 SUPERFAMILY SSF102114 15 286 2.49E-66 T 12-10-2018 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 299 7.3E-27 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 Pfam PF13353 4Fe-4S single cluster domain 30 134 3.7E-9 T 12-10-2018 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 344 35.879 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 SMART SM00729 23 226 8.0E-6 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 Pfam PF04055 Radical SAM superfamily 27 187 5.8E-25 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_20260 4078e80249a259359ce6a0094e95999e 344 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 344 4.3E-109 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 Gene3D G3DSA:3.40.630.10 166 479 4.4E-133 T 12-10-2018 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 SUPERFAMILY SSF53187 163 478 1.29E-121 T 12-10-2018 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 Gene3D G3DSA:3.40.220.10 1 165 4.2E-13 T 12-10-2018 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 SUPERFAMILY SSF52949 1 163 5.89E-12 T 12-10-2018 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 38 135 3.0E-9 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 169 470 1.9E-119 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 2.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 2.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 2.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 2.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 2.3E-54 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABD1_02130 bf1c4caef7d9e35a914bcb9ad260b105 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 34.929 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Pfam PF01493 GXGXG motif 1246 1432 5.6E-76 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Gene3D G3DSA:3.60.20.10 23 556 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Gene3D G3DSA:3.20.20.70 442 802 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Gene3D G3DSA:3.20.20.70 494 1180 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Pfam PF01645 Conserved region in glutamate synthase 804 1165 1.0E-147 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Pfam PF00310 Glutamine amidotransferases class-II 23 437 1.2E-162 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Gene3D G3DSA:2.160.20.60 1219 1489 3.8E-98 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 SUPERFAMILY SSF51395 460 1198 5.5E-246 T 12-10-2018 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 SUPERFAMILY SSF69336 1221 1476 1.31E-88 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 SUPERFAMILY SSF56235 23 440 9.65E-141 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_30720 76e62e213355329a2876e3c39371c8c8 1491 Pfam PF04898 Glutamate synthase central domain 468 747 2.4E-106 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 Gene3D G3DSA:3.50.50.60 2 172 1.9E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 SUPERFAMILY SSF51905 10 221 5.09E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 9.6E-6 T 12-10-2018 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 9.6E-6 T 12-10-2018 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 1.4E-5 T 12-10-2018 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 1.4E-5 T 12-10-2018 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 Pfam PF00743 Flavin-binding monooxygenase-like 16 366 2.6E-20 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 Gene3D G3DSA:3.50.50.60 320 496 2.7E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23970 0f0e122a636fbd0bd2bbe0f4b1be66e0 501 SUPERFAMILY SSF51905 285 461 7.77E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 4.9E-37 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Gene3D G3DSA:2.40.110.10 119 231 2.6E-41 T 12-10-2018 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.3E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.1E-51 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 SUPERFAMILY SSF47203 225 375 2.74E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 SUPERFAMILY SSF56645 2 240 4.97E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Gene3D G3DSA:1.20.140.10 232 375 8.9E-58 T 12-10-2018 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 PIRSF PIRSF016578 1 217 9.0E-14 T 12-10-2018 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 PIRSF PIRSF016578 234 371 2.3E-13 T 12-10-2018 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_01060 b9d234e6a4b45db54081c0e58a439347 375 Gene3D G3DSA:1.10.540.10 1 118 6.9E-45 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 6.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 SMART SM00862 155 231 1.4E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 Pfam PF00072 Response regulator receiver domain 13 122 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 Gene3D G3DSA:3.40.50.2300 3 133 9.7E-33 T 12-10-2018 ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 SUPERFAMILY SSF52172 11 190 8.54E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 Gene3D G3DSA:1.10.10.10 134 237 9.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_21360 9cb736636f4fc0369def7c0af09bd696 238 SMART SM00448 11 121 7.6E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_29380 607215200bc39535052df7359ec04ec0 390 SUPERFAMILY SSF56645 14 253 1.44E-88 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Gene3D G3DSA:2.40.110.10 133 248 5.3E-42 T 12-10-2018 ABD1_29380 607215200bc39535052df7359ec04ec0 390 SUPERFAMILY SSF47203 241 390 1.08E-45 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Gene3D G3DSA:1.20.140.10 249 390 1.1E-42 T 12-10-2018 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Gene3D G3DSA:1.10.540.10 11 132 1.0E-39 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 1.6E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 130 1.1E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_29380 607215200bc39535052df7359ec04ec0 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 389 8.8E-41 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_24620 f3a4a1556ebc9f70b05491404b679ba8 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 17 375 1.1E-54 T 12-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB ABD1_24620 f3a4a1556ebc9f70b05491404b679ba8 392 Gene3D G3DSA:1.20.1250.20 199 382 9.4E-9 T 12-10-2018 ABD1_24620 f3a4a1556ebc9f70b05491404b679ba8 392 SUPERFAMILY SSF103473 9 380 2.75E-29 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_24620 f3a4a1556ebc9f70b05491404b679ba8 392 Gene3D G3DSA:1.20.1250.20 2 193 2.6E-11 T 12-10-2018 ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 SUPERFAMILY SSF53850 95 304 3.08E-42 T 12-10-2018 ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 Gene3D G3DSA:3.40.190.290 98 301 3.7E-64 T 12-10-2018 ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 Pfam PF03466 LysR substrate binding domain 95 301 9.1E-40 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 Gene3D G3DSA:1.10.10.10 8 93 4.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14050 758c60c1d201ed2209067ad01dfa08fd 311 SUPERFAMILY SSF46785 10 89 4.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07970 ab904167e2f587605a35a554866851b3 394 SUPERFAMILY SSF56935 35 394 2.33E-5 T 12-10-2018 ABD1_07970 ab904167e2f587605a35a554866851b3 394 Pfam PF07396 Phosphate-selective porin O and P 100 199 5.8E-6 T 12-10-2018 IPR010870 Phosphate-selective porin O/P ABD1_04660 0c26348b0b204e4b38fec50a69a1594d 428 SUPERFAMILY SSF53756 47 417 6.67E-71 T 12-10-2018 ABD1_04660 0c26348b0b204e4b38fec50a69a1594d 428 Pfam PF00534 Glycosyl transferases group 1 235 391 1.7E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 ABD1_04660 0c26348b0b204e4b38fec50a69a1594d 428 Gene3D G3DSA:3.40.50.2000 224 402 6.6E-63 T 12-10-2018 ABD1_04660 0c26348b0b204e4b38fec50a69a1594d 428 Pfam PF13439 Glycosyltransferase Family 4 59 227 1.5E-22 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABD1_04660 0c26348b0b204e4b38fec50a69a1594d 428 Gene3D G3DSA:3.40.50.2000 50 223 6.6E-63 T 12-10-2018 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 231 3.7E-8 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 PIRSF PIRSF016578 149 409 5.8E-25 T 12-10-2018 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 PIRSF PIRSF016578 18 114 4.4E-13 T 12-10-2018 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Gene3D G3DSA:2.40.110.10 140 238 2.8E-28 T 12-10-2018 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 SUPERFAMILY SSF56645 37 239 1.31E-42 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 258 390 9.7E-25 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Gene3D G3DSA:1.20.140.10 239 413 2.5E-55 T 12-10-2018 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Gene3D G3DSA:1.10.540.10 32 137 3.2E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 25 414 4.3E-195 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 SUPERFAMILY SSF47203 246 414 7.57E-26 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_03630 9ae96cafb669c0d7435fec373314b73f 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 137 1.9E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_07240 810e48169cb6c5619ff15cf2452fd790 558 Pfam PF05552 Conserved TM helix 25 56 1.5E-7 T 12-10-2018 IPR008910 Conserved TM helix ABD1_07240 810e48169cb6c5619ff15cf2452fd790 558 Pfam PF05552 Conserved TM helix 282 330 7.3E-16 T 12-10-2018 IPR008910 Conserved TM helix ABD1_07240 810e48169cb6c5619ff15cf2452fd790 558 Pfam PF05552 Conserved TM helix 191 236 3.1E-13 T 12-10-2018 IPR008910 Conserved TM helix ABD1_07240 810e48169cb6c5619ff15cf2452fd790 558 Pfam PF05552 Conserved TM helix 101 148 7.9E-18 T 12-10-2018 IPR008910 Conserved TM helix ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Gene3D G3DSA:2.40.50.140 639 748 2.2E-21 T 12-10-2018 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Gene3D G3DSA:2.40.50.140 75 154 4.7E-8 T 12-10-2018 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Pfam PF08206 Ribonuclease B OB domain 95 147 4.8E-7 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SUPERFAMILY SSF50249 78 153 1.72E-10 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Pfam PF00773 RNB domain 267 592 6.2E-106 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 ProSitePatterns PS01175 Ribonuclease II family signature. 560 584 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SUPERFAMILY SSF50249 637 718 2.33E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SUPERFAMILY SSF50249 235 636 3.83E-140 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 27 720 5.5E-231 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SUPERFAMILY SSF50249 144 245 4.71E-9 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 84 719 7.5E-191 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Hamap MF_01895 Ribonuclease R [rnr]. 46 719 50.134 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 Pfam PF00575 S1 RNA binding domain 637 717 5.5E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SMART SM00316 636 719 5.2E-12 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_29290 82c2ec6fe0c87851bed3859e0ff9393e 810 SMART SM00955 267 593 2.3E-171 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABD1_13040 cfb1a19c0aa91cf3821300b29f142a36 217 Pfam PF09347 Domain of unknown function (DUF1989) 15 186 8.4E-65 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 ABD1_13040 cfb1a19c0aa91cf3821300b29f142a36 217 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 10 211 2.1E-93 T 12-10-2018 IPR017791 Urea carboxylase-associated protein 1 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 1.2E-32 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.0E-39 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 PIRSF PIRSF016578 4 361 5.8E-16 T 12-10-2018 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 SUPERFAMILY SSF47203 229 377 1.26E-41 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 SUPERFAMILY SSF56645 3 241 1.05E-75 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Gene3D G3DSA:1.10.540.10 1 120 7.4E-39 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Gene3D G3DSA:1.20.140.10 234 377 1.5E-39 T 12-10-2018 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Gene3D G3DSA:2.40.110.10 121 233 7.3E-40 T 12-10-2018 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.3E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_28960 084585e6fb6900a0c7e42d7dfd949575 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_08390 e6b825dd53da306905c5a78b4713c358 107 Pfam PF03658 RnfH family Ubiquitin 6 85 2.3E-24 T 12-10-2018 IPR005346 RnfH protein ABD1_08390 e6b825dd53da306905c5a78b4713c358 107 SUPERFAMILY SSF54285 6 77 2.62E-19 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABD1_08390 e6b825dd53da306905c5a78b4713c358 107 Gene3D G3DSA:3.10.20.280 1 87 7.2E-25 T 12-10-2018 IPR037021 RnfH superfamily ABD1_08390 e6b825dd53da306905c5a78b4713c358 107 Hamap MF_00460 Protein RnfH [rnfH]. 5 93 21.754 T 12-10-2018 IPR005346 RnfH protein ABD1_08550 4a2d1ed58497dcde0a1cf5c7b94191f4 507 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 493 6.3E-137 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABD1_08550 4a2d1ed58497dcde0a1cf5c7b94191f4 507 SUPERFAMILY SSF103473 9 499 4.32E-67 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_08550 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Gene3D G3DSA:1.20.1250.20 272 502 1.2E-14 T 12-10-2018 ABD1_08550 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Gene3D G3DSA:1.20.1720.10 18 256 5.2E-47 T 12-10-2018 ABD1_08550 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Pfam PF07690 Major Facilitator Superfamily 22 416 3.2E-54 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.40.5.10 1 50 1.0E-21 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.5E-26 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 5.6E-49 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55658 1 57 4.53E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 7.8E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.10.430.100 61 148 2.8E-29 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABD1_21720 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55653 60 148 2.62E-26 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 Gene3D G3DSA:3.40.190.10 165 266 1.1E-50 T 12-10-2018 ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 Gene3D G3DSA:1.10.10.10 2 90 2.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 SUPERFAMILY SSF53850 88 298 3.44E-39 T 12-10-2018 ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 SUPERFAMILY SSF46785 3 83 1.31E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 Pfam PF03466 LysR substrate binding domain 88 295 3.4E-35 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 Gene3D G3DSA:3.40.190.10 91 292 1.1E-50 T 12-10-2018 ABD1_23990 9376038b6ba27fecbf290619dee7cea0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 Pfam PF00005 ABC transporter 69 224 7.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 53 300 9.8E-123 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 Gene3D G3DSA:3.40.50.300 52 298 1.4E-62 T 12-10-2018 ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 SUPERFAMILY SSF52540 52 288 2.87E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 SMART SM00382 77 272 8.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_24320 b367afb20329cf2d2e68b736836b30c6 300 ProSitePatterns PS00211 ABC transporters family signature. 197 211 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 Gene3D G3DSA:1.25.40.10 11 172 1.4E-36 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 SMART SM00671 65 102 6.2 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 SMART SM00671 22 57 3.1E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 SMART SM00671 103 139 0.002 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 SMART SM00671 140 172 35.0 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 SUPERFAMILY SSF81901 17 170 1.48E-27 T 12-10-2018 ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 Pfam PF08238 Sel1 repeat 23 57 5.0E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 Pfam PF08238 Sel1 repeat 103 139 0.012 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 Pfam PF08238 Sel1 repeat 142 169 0.12 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_p00060 971fe11cc92d152eb91e24d330307ce4 172 Pfam PF08238 Sel1 repeat 59 102 1.4E-4 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_18300 087216375858ead2c4245250ad898c52 243 SMART SM00345 18 77 5.3E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18300 087216375858ead2c4245250ad898c52 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18300 087216375858ead2c4245250ad898c52 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18300 087216375858ead2c4245250ad898c52 243 Pfam PF07702 UTRA domain 102 236 1.2E-16 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_18300 087216375858ead2c4245250ad898c52 243 Gene3D G3DSA:1.10.10.10 9 77 2.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18300 087216375858ead2c4245250ad898c52 243 SUPERFAMILY SSF64288 65 242 2.98E-25 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_18300 087216375858ead2c4245250ad898c52 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 4.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18300 087216375858ead2c4245250ad898c52 243 SUPERFAMILY SSF46785 11 90 1.61E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18300 087216375858ead2c4245250ad898c52 243 Gene3D G3DSA:3.40.1410.10 86 241 1.5E-21 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_18300 087216375858ead2c4245250ad898c52 243 SMART SM00866 97 237 3.9E-14 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_29070 3bbfe666855bcdf3082fe5c96fe10a03 201 Gene3D G3DSA:2.60.120.620 11 198 2.1E-48 T 12-10-2018 ABD1_29070 3bbfe666855bcdf3082fe5c96fe10a03 201 SMART SM00702 30 194 6.6E-12 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ABD1_29070 3bbfe666855bcdf3082fe5c96fe10a03 201 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 1.8E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ABD1_23260 001d8b11efb0d103570590da28b634cb 364 Pfam PF03922 OmpW family 118 364 1.1E-17 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 ABD1_23260 001d8b11efb0d103570590da28b634cb 364 SUPERFAMILY SSF56925 126 364 1.53E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABD1_10760 f78a0c4c53cfd038bf368adeb5cbb847 350 Gene3D G3DSA:1.10.3720.10 105 339 1.8E-19 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_10760 f78a0c4c53cfd038bf368adeb5cbb847 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 342 1.6E-34 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_10760 f78a0c4c53cfd038bf368adeb5cbb847 350 SUPERFAMILY SSF161098 111 328 2.62E-13 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 PRINTS PR00412 Epoxide hydrolase signature 61 76 2.4E-14 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 PRINTS PR00412 Epoxide hydrolase signature 41 59 2.4E-14 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 PRINTS PR00412 Epoxide hydrolase signature 105 118 2.4E-14 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 PRINTS PR00412 Epoxide hydrolase signature 266 288 2.4E-14 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 SUPERFAMILY SSF53474 8 291 8.26E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 Pfam PF00561 alpha/beta hydrolase fold 35 273 1.5E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_18060 0992fc89b92ddfbb0a5f282dad54fedc 299 Gene3D G3DSA:3.40.50.1820 13 290 1.5E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_00060 42898f7103f1a2518a60b7d2cb36c36f 185 Pfam PF09335 SNARE associated Golgi protein 45 171 2.0E-22 T 12-10-2018 IPR032816 SNARE associated Golgi protein ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 SUPERFAMILY SSF56645 28 226 3.14E-37 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 PIRSF PIRSF016578 5 393 3.5E-23 T 12-10-2018 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Gene3D G3DSA:1.20.140.10 228 400 1.9E-46 T 12-10-2018 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Gene3D G3DSA:1.10.540.10 20 125 7.2E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 124 1.4E-7 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 218 1.1E-8 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Gene3D G3DSA:2.40.110.10 128 227 1.2E-26 T 12-10-2018 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 SUPERFAMILY SSF47203 240 402 4.83E-17 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 245 378 1.2E-14 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_14880 8e37932ab1f69e384c96aab9b52d5bda 403 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 13 403 1.4E-150 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.40.1190.10 111 324 1.5E-82 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 1.4E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF53623 108 325 1.7E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.40.50.720 23 110 8.7E-33 T 12-10-2018 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.90.190.20 325 480 1.1E-45 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.7E-170 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 1.2E-29 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 43.174 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF53244 326 475 1.14E-45 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF08245 Mur ligase middle domain 127 307 5.7E-30 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_32310 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF51984 22 109 1.7E-29 T 12-10-2018 ABD1_01620 e2e1312b4eb6fe0a05b269f7bc739cd9 404 Pfam PF07690 Major Facilitator Superfamily 26 337 4.7E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_01620 e2e1312b4eb6fe0a05b269f7bc739cd9 404 Gene3D G3DSA:1.20.1250.20 14 392 2.9E-41 T 12-10-2018 ABD1_01620 e2e1312b4eb6fe0a05b269f7bc739cd9 404 SUPERFAMILY SSF103473 10 393 3.27E-53 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18110 fef2a6b5cec49ee4a721cfd90563c543 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_18110 fef2a6b5cec49ee4a721cfd90563c543 254 Pfam PF00005 ABC transporter 17 164 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_18110 fef2a6b5cec49ee4a721cfd90563c543 254 SMART SM00382 26 212 3.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_18110 fef2a6b5cec49ee4a721cfd90563c543 254 SUPERFAMILY SSF52540 2 215 1.28E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_18110 fef2a6b5cec49ee4a721cfd90563c543 254 Gene3D G3DSA:3.40.50.300 1 248 1.8E-63 T 12-10-2018 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 SUPERFAMILY SSF55874 379 504 1.31E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 SUPERFAMILY SSF47384 288 361 5.1E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 SMART SM00387 401 507 1.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 503 3.6E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 Gene3D G3DSA:3.30.450.20 167 236 1.2E-5 T 12-10-2018 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 Gene3D G3DSA:1.10.287.130 281 360 4.9E-16 T 12-10-2018 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 Gene3D G3DSA:3.30.565.10 366 506 3.8E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 SMART SM00388 298 362 4.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 SUPERFAMILY SSF55785 177 239 9.52E-6 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_02190 f159826b6348cf771f7abfb08c1247a2 507 Pfam PF00512 His Kinase A (phospho-acceptor) domain 298 360 3.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 1.7E-121 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 293 312 2.8E-79 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 8.1E-50 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 SUPERFAMILY SSF51905 2 313 1.36E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.3E-39 T 12-10-2018 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.3E-39 T 12-10-2018 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.3E-39 T 12-10-2018 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 5.3E-39 T 12-10-2018 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 5.3E-39 T 12-10-2018 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 Gene3D G3DSA:3.50.50.60 117 243 4.1E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABD1_08210 47fb51e1047c6206a50704144ecb79fa 315 Gene3D G3DSA:3.50.50.60 9 311 4.1E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_24200 f95873ef660cafb90e1048539409f6b1 255 Gene3D G3DSA:3.40.1210.10 1 254 8.1E-83 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_24200 f95873ef660cafb90e1048539409f6b1 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 8.2E-67 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_24200 f95873ef660cafb90e1048539409f6b1 255 Pfam PF01975 Survival protein SurE 3 186 2.0E-56 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_24200 f95873ef660cafb90e1048539409f6b1 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 255 34.872 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_24200 f95873ef660cafb90e1048539409f6b1 255 SUPERFAMILY SSF64167 2 252 9.29E-76 T 12-10-2018 ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 Gene3D G3DSA:1.10.3730.10 103 209 5.0E-31 T 12-10-2018 ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 205 17.234 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 SUPERFAMILY SSF48179 100 206 6.46E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 SUPERFAMILY SSF51735 1 97 1.66E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 101 204 8.7E-27 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_12430 61f0fea58bbb4cf42825b64170ff092a 216 Gene3D G3DSA:3.40.50.720 1 102 3.9E-20 T 12-10-2018 ABD1_03190 713b210ce9782bbf1c6a934e8fc7aa9d 500 Pfam PF13361 UvrD-like helicase C-terminal domain 424 477 3.3E-10 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABD1_03190 713b210ce9782bbf1c6a934e8fc7aa9d 500 Pfam PF13245 AAA domain 13 252 7.6E-13 T 12-10-2018 ABD1_03190 713b210ce9782bbf1c6a934e8fc7aa9d 500 Gene3D G3DSA:3.40.50.300 272 486 2.8E-12 T 12-10-2018 ABD1_03190 713b210ce9782bbf1c6a934e8fc7aa9d 500 SUPERFAMILY SSF52540 9 481 5.0E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52518 315 499 1.14E-59 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 628 42.238 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52922 488 625 9.03E-32 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 4.6E-105 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Gene3D G3DSA:3.40.50.920 499 632 3.2E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52518 12 378 3.4E-75 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 SMART SM00861 316 480 2.2E-68 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF02780 Transketolase, C-terminal domain 500 619 4.9E-28 T 12-10-2018 IPR033248 Transketolase, C-terminal domain ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 625 1.5E-240 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Gene3D G3DSA:3.40.50.970 315 488 3.8E-68 T 12-10-2018 ABD1_29930 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF02779 Transketolase, pyrimidine binding domain 316 475 4.6E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_14350 b0338e43a71fab313b8487791fc4000e 481 PIRSF PIRSF006446 3 464 9.9E-212 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABD1_14350 b0338e43a71fab313b8487791fc4000e 481 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 439 6.3E-168 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 Pfam PF00210 Ferritin-like domain 8 141 9.9E-34 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 128 149 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-57 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 SUPERFAMILY SSF47240 1 154 1.39E-45 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 PIRSF PIRSF002560 1 154 1.7E-62 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 1.0E-62 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_30630 8e44041c1b302a9b5b3d4937a33368f9 154 Gene3D G3DSA:1.20.1260.10 1 154 5.4E-59 T 12-10-2018 IPR012347 Ferritin-like ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SUPERFAMILY SSF52113 596 670 1.0E-17 T 12-10-2018 IPR036420 BRCT domain superfamily ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF12826 Helix-hairpin-helix motif 515 577 1.1E-20 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 4.9E-12 T 12-10-2018 IPR001357 BRCT domain ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 7.5E-129 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SUPERFAMILY SSF56091 4 319 2.67E-117 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SUPERFAMILY SSF47781 407 588 2.45E-59 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:2.20.70.80 396 433 1.4E-12 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF14520 Helix-hairpin-helix domain 449 505 0.0016 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 PIRSF PIRSF001604 1 674 2.0E-245 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Hamap MF_01588 DNA ligase [ligA]. 4 670 51.131 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:2.40.50.140 321 393 8.1E-33 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00292 596 673 1.2E-9 T 12-10-2018 IPR001357 BRCT domain ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:3.30.470.90 73 320 8.2E-100 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00278 449 468 790.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00278 517 536 13.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00278 485 504 4.6 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00278 549 568 400.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 400 2.1E-32 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SMART SM00532 5 451 1.6E-249 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:3.40.50.10190 590 671 5.1E-26 T 12-10-2018 IPR036420 BRCT domain superfamily ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:1.10.150.20 511 589 3.9E-27 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 411 437 3.0E-7 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 665 1.5E-250 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 SUPERFAMILY SSF50249 321 402 7.71E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:1.10.150.20 435 510 1.7E-27 T 12-10-2018 ABD1_07560 dc3832e984eefbe0ac8129f7f5f51a5e 678 Gene3D G3DSA:1.10.287.610 1 72 9.0E-27 T 12-10-2018 ABD1_22070 17c337e8a0b6e2ca46dda3f7f8e29ba4 206 Gene3D G3DSA:3.90.79.10 44 206 3.8E-37 T 12-10-2018 ABD1_22070 17c337e8a0b6e2ca46dda3f7f8e29ba4 206 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 37 1.7E-13 T 12-10-2018 ABD1_22070 17c337e8a0b6e2ca46dda3f7f8e29ba4 206 SUPERFAMILY SSF55811 24 196 1.76E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_22070 17c337e8a0b6e2ca46dda3f7f8e29ba4 206 Pfam PF00293 NUDIX domain 71 176 8.6E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 SUPERFAMILY SSF51261 37 257 1.62E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 Gene3D G3DSA:3.10.350.10 34 88 7.2E-14 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 Pfam PF01551 Peptidase family M23 161 253 9.9E-28 T 12-10-2018 IPR016047 Peptidase M23 ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 Pfam PF01476 LysM domain 38 80 5.1E-13 T 12-10-2018 IPR018392 LysM domain ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 Gene3D G3DSA:2.70.70.10 126 257 3.3E-31 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_24190 55bfa8233e78047df98dd54bc15e4fc4 259 SMART SM00257 37 81 1.2E-12 T 12-10-2018 IPR018392 LysM domain ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 Hamap MF_00313 Glutaminase [glsA]. 5 304 40.223 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 SUPERFAMILY SSF56601 4 304 6.62E-109 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 SUPERFAMILY SSF52091 327 398 3.73E-7 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 Gene3D G3DSA:3.40.710.10 1 306 2.2E-119 T 12-10-2018 ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 Pfam PF04960 Glutaminase 22 303 2.6E-113 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 Gene3D G3DSA:3.30.750.24 310 404 3.0E-22 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_09150 764a7d77a5d2e5fd18b6ab387417593c 440 TIGRFAM TIGR03814 Gln_ase: glutaminase A 17 303 2.5E-101 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ABD1_08230 31bee23b89d157a0c8174f7fb0ed8947 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 201 2.9E-58 T 12-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 ABD1_08230 31bee23b89d157a0c8174f7fb0ed8947 206 Pfam PF01810 LysE type translocator 15 203 3.0E-48 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_08230 31bee23b89d157a0c8174f7fb0ed8947 206 PIRSF PIRSF006324 1 206 7.7E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_26800 5f11b0e941ace36b19f6099602fdebac 686 Pfam PF10136 Site-specific recombinase 26 665 6.2E-223 T 12-10-2018 IPR011385 Putative site-specific recombinase Gcr ABD1_26800 5f11b0e941ace36b19f6099602fdebac 686 PIRSF PIRSF015380 7 681 1.4E-166 T 12-10-2018 IPR011385 Putative site-specific recombinase Gcr ABD1_00080 c55085a2a1f9da20a5ff267e1c161d4a 295 SUPERFAMILY SSF53850 90 177 1.69E-5 T 12-10-2018 ABD1_00080 c55085a2a1f9da20a5ff267e1c161d4a 295 Gene3D G3DSA:3.40.190.170 6 194 5.0E-11 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 Gene3D G3DSA:3.50.50.60 6 347 9.1E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 304 317 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.5E-20 T 12-10-2018 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 4.5E-20 T 12-10-2018 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.5E-20 T 12-10-2018 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 4.5E-20 T 12-10-2018 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 SUPERFAMILY SSF51905 6 394 2.66E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 398 7.8E-104 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 Gene3D G3DSA:3.30.9.50 80 279 9.1E-93 T 12-10-2018 ABD1_10590 20631598280c8b96b0e1b11a4e13ab07 410 Pfam PF01494 FAD binding domain 6 353 5.9E-34 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 1.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 1.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 1.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 Pfam PF01252 Signal peptidase (SPase) II 24 165 3.4E-38 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.593 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 TIGRFAM TIGR00077 lspA: signal peptidase II 18 170 2.9E-41 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_00180 9e0507ecff5527f35c8c9bfb640395a9 176 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABD1_32100 69c5414917d10941d50734f832af249d 100 Gene3D G3DSA:1.10.10.10 1 100 4.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_32100 69c5414917d10941d50734f832af249d 100 SUPERFAMILY SSF46785 2 98 1.09E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_32100 69c5414917d10941d50734f832af249d 100 Pfam PF12840 Helix-turn-helix domain 4 75 1.2E-14 T 12-10-2018 ABD1_32100 69c5414917d10941d50734f832af249d 100 SMART SM00418 5 94 4.4E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_15130 f69d3f21568743fe31fefa2057112189 178 Gene3D G3DSA:2.60.40.1090 21 178 1.9E-37 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 ABD1_15130 f69d3f21568743fe31fefa2057112189 178 SUPERFAMILY SSF49401 24 178 8.95E-30 T 12-10-2018 IPR008966 Adhesion domain superfamily ABD1_15130 f69d3f21568743fe31fefa2057112189 178 Pfam PF16970 Type-1 fimbrial protein, A 49 178 1.4E-25 T 12-10-2018 IPR039458 Type-1 fimbrial protein, A ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 Pfam PF13356 Arm DNA-binding domain 11 96 4.1E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 Gene3D G3DSA:1.10.443.10 219 401 5.7E-21 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 Gene3D G3DSA:1.10.150.130 104 218 1.1E-25 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 Pfam PF00589 Phage integrase family 218 378 6.7E-26 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 SUPERFAMILY SSF56349 108 388 9.71E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_08570 dd0ac44fc879014efceb5d108bbc862c 409 Gene3D G3DSA:3.30.160.390 10 98 1.0E-21 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 PIRSF PIRSF005572 2 385 2.8E-128 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 SUPERFAMILY SSF53383 3 392 2.58E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 Pfam PF00266 Aminotransferase class-V 5 369 5.5E-84 T 12-10-2018 IPR000192 Aminotransferase class V domain ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 Gene3D G3DSA:3.90.1150.10 5 377 3.3E-158 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 54.083 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 1.2E-208 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 ABD1_16190 f7d5de44ae5d7e9173ce68a30b69010d 405 Gene3D G3DSA:3.40.640.10 16 263 3.3E-158 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 SUPERFAMILY SSF53474 5 268 6.6E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 Pfam PF12697 Alpha/beta hydrolase family 34 265 1.3E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 2.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 2.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 2.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09060 fe0a1e50f7a4be2c8c0349927e13b279 274 Gene3D G3DSA:3.40.50.1820 4 273 9.4E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_18280 549661082ec84a5727468dbdd2752768 447 Gene3D G3DSA:1.20.1250.20 3 206 5.0E-25 T 12-10-2018 ABD1_18280 549661082ec84a5727468dbdd2752768 447 Gene3D G3DSA:1.20.1250.20 236 441 6.5E-32 T 12-10-2018 ABD1_18280 549661082ec84a5727468dbdd2752768 447 SUPERFAMILY SSF103473 4 437 2.62E-70 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18280 549661082ec84a5727468dbdd2752768 447 Pfam PF07690 Major Facilitator Superfamily 19 387 2.3E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 Gene3D G3DSA:3.30.1130.10 1 121 1.7E-32 T 12-10-2018 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 7.7E-25 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 SMART SM00905 4 115 1.4E-37 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.4E-28 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 1.2E-27 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABD1_21420 5aacfda4b1dd88bc3494c2b3e73860de 126 SUPERFAMILY SSF55620 1 117 2.39E-30 T 12-10-2018 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 207 4.0E-42 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 SUPERFAMILY SSF52540 401 683 3.98E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Gene3D G3DSA:3.90.1570.50 100 257 3.0E-27 T 12-10-2018 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Gene3D G3DSA:3.40.50.300 466 707 7.0E-47 T 12-10-2018 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 4 701 2.0E-190 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Pfam PF04851 Type III restriction enzyme, res subunit 273 447 1.5E-16 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Pfam PF11867 Domain of unknown function (DUF3387) 701 1029 8.0E-118 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 Gene3D G3DSA:3.40.50.300 262 465 5.5E-50 T 12-10-2018 ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 SUPERFAMILY SSF52540 227 504 3.63E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05690 5523e9b02b875acd3a0cbb5edc5c5bb3 1034 SMART SM00487 267 480 7.2E-9 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.7E-253 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.970 1 182 6.8E-73 T 12-10-2018 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.1E-44 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52518 373 567 4.07E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.970 365 573 1.1E-63 T 12-10-2018 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.1220 191 362 9.6E-61 T 12-10-2018 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52518 4 179 7.15E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.1E-46 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52467 190 362 2.55E-64 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_05120 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 3.8E-59 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF00919 Uncharacterized protein family UPF0004 32 132 1.0E-28 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 32 470 1.4E-141 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 186 206 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF04055 Radical SAM superfamily 186 360 1.5E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Gene3D G3DSA:3.80.30.20 181 415 2.0E-81 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 SMART SM00729 182 402 1.2E-59 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 31 476 69.619 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 SUPERFAMILY SSF102114 165 408 1.7E-61 T 12-10-2018 ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Gene3D G3DSA:3.40.50.12160 31 165 2.4E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF01938 TRAM domain 414 475 7.9E-8 T 12-10-2018 IPR002792 TRAM domain ABD1_29130 f728509f2038897f6da5c6a47a09d9c3 483 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 32 470 2.0E-175 T 12-10-2018 ABD1_14500 1ce6b6435101bc1fba90695d803ede73 228 SUPERFAMILY SSF52499 6 207 6.15E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_14500 1ce6b6435101bc1fba90695d803ede73 228 Pfam PF00857 Isochorismatase family 16 168 2.0E-27 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_14500 1ce6b6435101bc1fba90695d803ede73 228 Gene3D G3DSA:3.40.50.850 4 207 6.0E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_18820 e92694727ae979e6ef62de4dd45d06d2 161 Pfam PF00866 Ring hydroxylating beta subunit 18 151 1.7E-20 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 ABD1_18820 e92694727ae979e6ef62de4dd45d06d2 161 SUPERFAMILY SSF54427 3 161 7.17E-37 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_18820 e92694727ae979e6ef62de4dd45d06d2 161 Gene3D G3DSA:3.10.450.50 1 161 8.1E-35 T 12-10-2018 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 SUPERFAMILY SSF50447 10 98 3.43E-22 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 6.3E-45 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 Pfam PF01782 RimM N-terminal domain 13 95 4.2E-23 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 SUPERFAMILY SSF50346 104 179 1.31E-18 T 12-10-2018 IPR011033 PRC-barrel-like superfamily ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.789 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 Gene3D G3DSA:2.30.30.240 99 182 8.9E-33 T 12-10-2018 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 Gene3D G3DSA:2.40.30.60 1 98 1.4E-36 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 ABD1_30480 564cd2f26fbae54fbaaea07a459b5a16 182 Pfam PF05239 PRC-barrel domain 102 177 1.6E-7 T 12-10-2018 IPR027275 PRC-barrel domain ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 SUPERFAMILY SSF69255 438 532 3.92E-24 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 850 998 1.2E-43 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Gene3D G3DSA:3.30.1920.30 254 336 6.2E-43 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Gene3D G3DSA:2.40.50.230 429 538 3.0E-31 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 SUPERFAMILY SSF69279 24 216 3.97E-39 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 561 668 2.6E-36 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Gene3D G3DSA:3.55.50.10 111 221 6.2E-43 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Pfam PF05954 Phage late control gene D protein (GPD) 44 384 6.0E-61 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 27 586 4.9E-70 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 Gene3D G3DSA:2.30.110.50 31 377 6.2E-43 T 12-10-2018 ABD1_32670 36c1241cfde551d1065ea9e7016ba0ff 1093 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 588 3.8E-55 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 49.817 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 234 8.6E-45 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.30.1390.30 85 160 1.0E-47 T 12-10-2018 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.90.1310.10 64 244 1.0E-47 T 12-10-2018 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 605 3.5E-221 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 600 2.3E-75 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 SUPERFAMILY SSF56519 56 249 1.57E-52 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.40.710.10 245 617 1.5E-99 T 12-10-2018 ABD1_09750 070cada2d54003c2735296d49ab79a06 672 SUPERFAMILY SSF56601 250 606 8.54E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_24750 a9f556a3fd18576d7ed23b350ff7e241 416 Gene3D G3DSA:3.90.550.10 29 269 7.7E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_24750 a9f556a3fd18576d7ed23b350ff7e241 416 SUPERFAMILY SSF53448 42 317 2.53E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_24750 a9f556a3fd18576d7ed23b350ff7e241 416 Pfam PF13641 Glycosyltransferase like family 2 52 278 1.4E-35 T 12-10-2018 ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 PRINTS PR01755 Bacterial translocase SecF protein signature 242 257 1.2E-26 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 PRINTS PR01755 Bacterial translocase SecF protein signature 210 228 1.2E-26 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 PRINTS PR01755 Bacterial translocase SecF protein signature 49 64 1.2E-26 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 PRINTS PR01755 Bacterial translocase SecF protein signature 162 176 1.2E-26 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 50 293 4.4E-76 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 Gene3D G3DSA:1.20.1640.10 110 304 1.8E-12 T 12-10-2018 ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 Pfam PF02355 Protein export membrane protein 125 300 1.2E-61 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 Pfam PF07549 SecD/SecF GG Motif 44 71 7.1E-10 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 SUPERFAMILY SSF82866 115 301 4.84E-39 T 12-10-2018 ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 22 304 26.793 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABD1_28580 dc2bad60059fcf8595f5ecca7dc2e718 321 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 111 291 2.9E-47 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 Gene3D G3DSA:3.40.50.300 5 198 2.0E-44 T 12-10-2018 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 5.2E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 5.2E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 Pfam PF07664 Ferrous iron transport protein B C terminus 394 446 3.8E-13 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 SUPERFAMILY SSF52540 5 170 1.68E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 Pfam PF02421 Ferrous iron transport protein B 6 165 1.2E-56 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 Pfam PF07670 Nucleoside recognition 451 587 1.2E-23 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABD1_02270 c11544feba397f65cc2f0dccfcb1c1df 617 Pfam PF07670 Nucleoside recognition 283 374 1.2E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PIRSF PIRSF001174 6 789 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 SMART SM00464 19 214 2.9E-62 T 12-10-2018 IPR003111 Lon, substrate-binding domain ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 690 698 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:3.40.50.300 326 503 6.3E-63 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:1.10.8.60 504 598 5.2E-32 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 TIGRFAM TIGR00763 lon: endopeptidase La 21 784 4.2E-281 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 584 786 1.1E-84 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Hamap MF_01973 Lon protease [lon]. 20 786 67.225 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 736 7.9E-50 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 7.9E-50 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 369 388 7.9E-50 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 609 625 7.9E-50 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 740 758 7.9E-50 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:3.30.230.10 599 786 2.0E-74 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 SMART SM00382 361 505 2.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:2.30.130.40 13 127 3.0E-28 T 12-10-2018 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF54211 609 784 1.78E-54 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF52540 327 598 1.47E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF88697 19 212 1.07E-29 T 12-10-2018 IPR015947 PUA-like superfamily ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 365 501 6.0E-20 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 212 2.2E-29 T 12-10-2018 IPR003111 Lon, substrate-binding domain ABD1_09860 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:1.20.58.1480 132 256 1.4E-23 T 12-10-2018 ABD1_16010 c49a6f73d6e6a8f038253e4c6e24fbce 219 Pfam PF02586 SOS response associated peptidase (SRAP) 44 206 4.3E-24 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) ABD1_16010 c49a6f73d6e6a8f038253e4c6e24fbce 219 Gene3D G3DSA:3.90.1680.10 2 209 1.3E-43 T 12-10-2018 IPR036590 SOS response associated peptidase-like ABD1_16010 c49a6f73d6e6a8f038253e4c6e24fbce 219 SUPERFAMILY SSF143081 21 203 3.53E-43 T 12-10-2018 IPR036590 SOS response associated peptidase-like ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:3.40.50.620 1 214 4.0E-89 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:2.40.30.10 284 374 4.1E-28 T 12-10-2018 ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 39.063 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 SUPERFAMILY SSF52402 2 245 3.53E-55 T 12-10-2018 ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 1.7E-133 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 Pfam PF03054 tRNA methyl transferase 3 366 3.7E-134 T 12-10-2018 ABD1_24260 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:2.30.30.280 215 282 2.5E-26 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABD1_31990 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 SMART SM00448 1 115 6.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31990 370199cc698851a2f8bd09966492355e 216 SMART SM00421 149 206 4.1E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 Pfam PF00072 Response regulator receiver domain 3 115 2.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31990 370199cc698851a2f8bd09966492355e 216 Gene3D G3DSA:3.40.50.12740 1 210 9.1E-55 T 12-10-2018 ABD1_31990 370199cc698851a2f8bd09966492355e 216 SUPERFAMILY SSF52172 1 130 5.27E-30 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_31990 370199cc698851a2f8bd09966492355e 216 SUPERFAMILY SSF46894 143 210 2.07E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_31990 370199cc698851a2f8bd09966492355e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 SUPERFAMILY SSF54611 2 141 4.36E-46 T 12-10-2018 IPR035958 SecB-like superfamily ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 Pfam PF02556 Preprotein translocase subunit SecB 5 142 3.3E-49 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 Gene3D G3DSA:3.10.420.10 1 152 8.7E-51 T 12-10-2018 IPR035958 SecB-like superfamily ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.9E-31 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.9E-31 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.9E-31 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.9E-31 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.871 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_04980 a05a9f0f5c8a9017e59fa7a3b7531f15 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 141 5.4E-46 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 Gene3D G3DSA:2.40.100.10 19 182 5.8E-63 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.7E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.7E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.7E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 SUPERFAMILY SSF50891 18 180 9.2E-60 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 179 1.1E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_33660 c8e91c836da67a3c3be67bbdaea84d86 185 PIRSF PIRSF001467 10 184 2.8E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.90.1310.10 150 263 2.5E-31 T 12-10-2018 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.90.1310.10 58 149 2.1E-10 T 12-10-2018 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 SUPERFAMILY SSF56519 68 262 3.01E-38 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 SUPERFAMILY SSF56601 214 602 5.96E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 587 2.8E-73 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.30.450.330 264 591 1.9E-124 T 12-10-2018 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 247 3.9E-17 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.40.710.10 325 507 1.9E-124 T 12-10-2018 ABD1_30870 4e873c2070d0323df05a8ed9a925686e 610 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 602 41.173 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 PIRSF PIRSF001237 1 344 2.4E-143 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 Gene3D G3DSA:3.20.20.140 2 343 1.4E-105 T 12-10-2018 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 SUPERFAMILY SSF51556 2 342 1.76E-141 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 Pfam PF01979 Amidohydrolase family 11 311 1.7E-17 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 4.1E-138 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_10820 7d6202b1787abd411aad3bb50ef414fa 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 45.453 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_11550 619be2e1fee1b9742224f231e6eb7949 215 Gene3D G3DSA:1.20.890.90 183 215 3.0E-5 T 12-10-2018 ABD1_11550 619be2e1fee1b9742224f231e6eb7949 215 Pfam PF10281 Putative stress-responsive nuclear envelope protein 180 211 1.6E-7 T 12-10-2018 IPR018803 Putative stress-responsive protein ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 PIRSF PIRSF029171 240 464 1.0E-5 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 PIRSF PIRSF029171 27 238 7.6E-53 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 Pfam PF03583 Secretory lipase 119 216 4.3E-5 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 Gene3D G3DSA:3.40.50.1820 302 467 1.7E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 Gene3D G3DSA:3.40.50.1820 26 262 1.5E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23460 049d9014f0c3f4f2df9f1688698387de 485 SUPERFAMILY SSF53474 73 441 7.01E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 1.1E-29 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 SMART SM00490 265 346 1.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 SMART SM00487 22 229 3.9E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 1.5E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.673 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 SUPERFAMILY SSF52540 78 365 5.82E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 Gene3D G3DSA:3.40.50.300 1 217 1.0E-73 T 12-10-2018 ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 Gene3D G3DSA:3.40.50.300 220 377 9.3E-51 T 12-10-2018 ABD1_22560 25705dad3a535cb30f8cc394fc0ad31a 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABD1_p00070 bad42d3ddb57a69c778fbd5409595fb3 170 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 51 157 3.8E-9 T 12-10-2018 IPR018958 Knr4/Smi1-like domain ABD1_p00070 bad42d3ddb57a69c778fbd5409595fb3 170 Gene3D G3DSA:3.40.1580.10 48 169 1.7E-9 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily ABD1_p00070 bad42d3ddb57a69c778fbd5409595fb3 170 SUPERFAMILY SSF160631 49 169 6.41E-8 T 12-10-2018 ABD1_28860 fa0abc8e5307b3dba02dd03bfcc7479a 279 PIRSF PIRSF000903 4 278 8.0E-93 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ABD1_28860 fa0abc8e5307b3dba02dd03bfcc7479a 279 SUPERFAMILY SSF56300 7 267 8.7E-49 T 12-10-2018 ABD1_28860 fa0abc8e5307b3dba02dd03bfcc7479a 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 275 9.8E-82 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ABD1_28860 fa0abc8e5307b3dba02dd03bfcc7479a 279 Gene3D G3DSA:3.60.21.10 6 278 8.9E-65 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_28860 fa0abc8e5307b3dba02dd03bfcc7479a 279 Pfam PF00149 Calcineurin-like phosphoesterase 8 132 2.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.9E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 5.8E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 SUPERFAMILY SSF52440 1 113 5.11E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 SUPERFAMILY SSF56059 83 347 4.24E-68 T 12-10-2018 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Pfam PF00364 Biotin-requiring enzyme 589 654 2.3E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Gene3D G3DSA:3.30.470.130 1 450 7.0E-196 T 12-10-2018 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Gene3D G3DSA:2.40.50.100 581 658 1.1E-21 T 12-10-2018 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 612 629 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 SUPERFAMILY SSF51246 331 448 2.83E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 SMART SM00878 336 443 1.3E-49 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 SUPERFAMILY SSF51230 584 655 1.83E-19 T 12-10-2018 IPR011053 Single hybrid motif ABD1_13700 ae832bbdfe728f8b8396b629011d87bd 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 9.2E-75 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 12-10-2018 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:3.30.1360.10 17 225 2.8E-79 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.622 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF55257 6 231 3.73E-31 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 2.9E-20 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 12-10-2018 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:2.170.120.12 53 175 2.8E-79 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF56553 53 176 9.68E-36 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 SMART SM00662 23 232 9.2E-86 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29410 e8da0edf6d38d02a2d89de60b2a1667b 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 3.8E-105 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 SUPERFAMILY SSF50249 7 83 2.23E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.231 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 Pfam PF00366 Ribosomal protein S17 11 78 4.1E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 Gene3D G3DSA:2.40.50.140 2 84 1.6E-35 T 12-10-2018 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 3.0E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.3E-36 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 3.1E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 3.1E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29570 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 3.1E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_22830 33604fadcbb3e6e430ab5c82c8f9e05b 183 Gene3D G3DSA:1.25.40.10 46 183 1.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_22830 33604fadcbb3e6e430ab5c82c8f9e05b 183 SUPERFAMILY SSF48452 88 148 3.52E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 PIRSF PIRSF006232 4 286 7.8E-79 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 Gene3D G3DSA:2.60.120.10 33 280 1.0E-76 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 Pfam PF02678 Pirin 25 127 4.8E-30 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 Pfam PF05726 Pirin C-terminal cupin domain 182 285 2.7E-24 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 SUPERFAMILY SSF51182 22 284 8.02E-72 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_08080 a9863877ea9c4472810fe5832b8ef305 286 Gene3D G3DSA:2.60.120.10 149 254 1.0E-76 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_15570 4698fcd37bd242cd2b12154985cc2d24 337 Gene3D G3DSA:3.30.200.20 1 92 4.8E-25 T 12-10-2018 ABD1_15570 4698fcd37bd242cd2b12154985cc2d24 337 Pfam PF01636 Phosphotransferase enzyme family 26 247 1.1E-24 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase ABD1_15570 4698fcd37bd242cd2b12154985cc2d24 337 SUPERFAMILY SSF56112 9 307 1.73E-43 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_15570 4698fcd37bd242cd2b12154985cc2d24 337 Gene3D G3DSA:3.90.1200.10 93 330 2.2E-65 T 12-10-2018 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 Gene3D G3DSA:1.10.1200.80 251 326 2.7E-14 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 Gene3D G3DSA:3.20.20.70 6 249 1.5E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 SUPERFAMILY SSF51395 10 318 1.23E-89 T 12-10-2018 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 4.1E-120 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 PIRSF PIRSF006621 1 327 4.7E-104 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.357 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.2E-101 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_24820 dd93436ddfb8cf84f5a41542f34bc5c9 341 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22410 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29120 9000cafcae6a7c0ea76c2cd981057523 647 Pfam PF01464 Transglycosylase SLT domain 489 590 2.3E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 ABD1_29120 9000cafcae6a7c0ea76c2cd981057523 647 Gene3D G3DSA:1.25.20.10 24 383 1.5E-52 T 12-10-2018 ABD1_29120 9000cafcae6a7c0ea76c2cd981057523 647 SUPERFAMILY SSF53955 485 633 1.74E-39 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_29120 9000cafcae6a7c0ea76c2cd981057523 647 Gene3D G3DSA:1.10.530.10 474 639 1.5E-38 T 12-10-2018 ABD1_29120 9000cafcae6a7c0ea76c2cd981057523 647 SUPERFAMILY SSF48435 26 477 1.07E-87 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 ABD1_01460 0e169f21041dcc2722c2a350a9e791f0 269 SUPERFAMILY SSF81345 4 256 6.67E-33 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_01460 0e169f21041dcc2722c2a350a9e791f0 269 Pfam PF00950 ABC 3 transport family 6 259 1.4E-53 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ABD1_01460 0e169f21041dcc2722c2a350a9e791f0 269 Gene3D G3DSA:1.10.3470.10 34 268 1.4E-7 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82866 297 487 1.83E-37 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:1.20.1640.10 15 513 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82693 42 138 8.37E-19 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:1.20.1640.10 527 1031 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82714 187 266 5.1E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82866 815 1038 6.15E-47 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.70.1440 680 879 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82693 139 325 3.45E-16 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82693 581 673 2.09E-5 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.70.1430 42 827 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.2E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.2E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.2E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.2E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 SUPERFAMILY SSF82714 734 818 1.28E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.70.1430 581 679 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.2090.10 731 819 3.2E-253 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Pfam PF00873 AcrB/AcrD/AcrF family 7 1032 8.3E-169 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.70.1320 138 328 3.2E-253 T 12-10-2018 ABD1_33500 f571ccdf258766e23a7693a67117c44e 1041 Gene3D G3DSA:3.30.2090.10 181 270 3.2E-253 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 Gene3D G3DSA:3.30.465.10 350 429 8.8E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 SUPERFAMILY SSF54631 201 336 5.66E-23 T 12-10-2018 ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF03471 Transporter associated domain 350 427 8.5E-22 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 SMART SM01091 349 429 6.4E-30 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 SUPERFAMILY SSF56176 347 431 2.73E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF01595 Domain of unknown function DUF21 8 199 3.4E-38 T 12-10-2018 IPR002550 CNNM, transmembrane domain ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 Gene3D G3DSA:3.10.580.10 195 349 3.2E-34 T 12-10-2018 ABD1_09600 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF00571 CBS domain 288 331 4.9E-5 T 12-10-2018 IPR000644 CBS domain ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 Gene3D G3DSA:1.10.3860.10 1 418 2.5E-117 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 SUPERFAMILY SSF118215 9 404 1.44E-112 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 Pfam PF00375 Sodium:dicarboxylate symporter family 9 403 1.0E-102 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 4.9E-24 T 12-10-2018 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 4.9E-24 T 12-10-2018 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.9E-24 T 12-10-2018 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 4.9E-24 T 12-10-2018 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 4.9E-24 T 12-10-2018 ABD1_08880 9389e37ddd8cc3a3edbeb5c583f9c05e 420 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.9E-24 T 12-10-2018 ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 360 3.1E-167 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 SUPERFAMILY SSF53335 3 360 7.35E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 343 353 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 Gene3D G3DSA:3.40.1350.30 39 182 3.8E-134 T 12-10-2018 ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 294 323 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 5 360 5.1E-164 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 Gene3D G3DSA:3.40.50.150 7 357 3.8E-134 T 12-10-2018 ABD1_15350 0581b372357b84bc76ece9e3349f6cd5 361 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 361 43.364 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 6.3E-30 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00175 Oxidoreductase NAD-binding domain 115 203 1.5E-8 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:3.40.50.80 104 222 3.9E-26 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:3.10.20.30 223 318 2.5E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF54292 214 316 8.65E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 8 318 83.126 T 12-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:2.40.30.10 2 103 6.9E-22 T 12-10-2018 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00970 Oxidoreductase FAD-binding domain 10 101 1.4E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 309 3.9E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF52343 100 227 8.12E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF63380 4 102 2.5E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_08040 71be7f1bb902991c51652c9f1ccc2190 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 SUPERFAMILY SSF75615 115 211 1.83E-24 T 12-10-2018 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 1.3E-96 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.1E-52 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 SUPERFAMILY SSF53790 212 456 3.66E-83 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Gene3D G3DSA:3.40.1010.10 215 331 1.2E-46 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 PIRSF PIRSF036426 1 457 5.2E-198 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Gene3D G3DSA:3.30.160.110 114 149 1.4E-14 T 12-10-2018 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Gene3D G3DSA:3.30.950.10 332 457 4.0E-47 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 3.6E-18 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Gene3D G3DSA:1.10.8.210 150 211 1.9E-9 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.053 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 SUPERFAMILY SSF51735 2 113 9.63E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Gene3D G3DSA:3.40.50.720 1 113 2.1E-25 T 12-10-2018 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 8.8E-59 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABD1_26730 66027b35da3cc981e3fe14b944675e36 457 Pfam PF13241 Putative NAD(P)-binding 7 116 1.0E-24 T 12-10-2018 ABD1_27500 5de24e3dd68ab2294d240b8ef22644ad 122 Pfam PF04304 Protein of unknown function (DUF454) 4 117 2.1E-35 T 12-10-2018 IPR007401 Protein of unknown function DUF454 ABD1_27500 5de24e3dd68ab2294d240b8ef22644ad 122 PIRSF PIRSF016789 1 122 1.7E-29 T 12-10-2018 IPR007401 Protein of unknown function DUF454 ABD1_14430 d8ca07b0b1989804c177803c09795dbd 264 SUPERFAMILY SSF52540 4 218 1.82E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_14430 d8ca07b0b1989804c177803c09795dbd 264 SMART SM00382 30 229 7.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_14430 d8ca07b0b1989804c177803c09795dbd 264 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_14430 d8ca07b0b1989804c177803c09795dbd 264 Pfam PF00005 ABC transporter 21 161 8.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_14430 d8ca07b0b1989804c177803c09795dbd 264 Gene3D G3DSA:3.40.50.300 2 259 1.0E-61 T 12-10-2018 ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 SUPERFAMILY SSF50814 38 193 1.5E-41 T 12-10-2018 IPR012674 Calycin ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 155 166 2.1E-9 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 182 192 2.1E-9 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 46 60 2.1E-9 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 83 92 2.1E-9 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 ProSitePatterns PS00213 Lipocalin signature. 47 58 - T 12-10-2018 IPR022272 Lipocalin family conserved site ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 Pfam PF08212 Lipocalin-like domain 46 192 3.0E-46 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 PIRSF PIRSF036893 7 195 6.2E-58 T 12-10-2018 IPR022271 Lipocalin, ApoD type ABD1_24910 4dab65d125f1a50a09afeac6df1384be 195 Gene3D G3DSA:2.40.128.20 27 194 5.5E-49 T 12-10-2018 IPR012674 Calycin ABD1_12390 0ac71ea34457b312c38404bfcdc8ecfa 181 Pfam PF09374 Predicted Peptidoglycan domain 97 178 9.0E-15 T 12-10-2018 IPR018537 Peptidoglycan binding domain ABD1_12390 0ac71ea34457b312c38404bfcdc8ecfa 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.9E-23 T 12-10-2018 IPR008565 Protein of unknown function DUF847 ABD1_12390 0ac71ea34457b312c38404bfcdc8ecfa 181 Gene3D G3DSA:1.20.141.10 2 181 3.5E-38 T 12-10-2018 ABD1_12390 0ac71ea34457b312c38404bfcdc8ecfa 181 SUPERFAMILY SSF53955 1 179 2.28E-42 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_31380 f618d7ac4b969a0c4c67635ff3181379 185 Gene3D G3DSA:3.40.50.360 1 184 4.3E-56 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_31380 f618d7ac4b969a0c4c67635ff3181379 185 Pfam PF02525 Flavodoxin-like fold 2 166 6.2E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_31380 f618d7ac4b969a0c4c67635ff3181379 185 SUPERFAMILY SSF52218 1 180 5.66E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.40.90 379 421 2.5E-20 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.5E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 SUPERFAMILY SSF64484 21 1362 0.0 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 1028 1122 1.1E-18 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.1790.20 1131 1310 1.4E-64 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.150.390 1312 1372 3.3E-27 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 1.9E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.132.30 646 795 1.2E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 5.4E-30 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 SMART SM00663 240 519 3.5E-177 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.274.100 495 645 1.9E-41 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 1147 1211 1.4E-64 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 3.6E-88 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 953 1027 2.8E-26 T 12-10-2018 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.098 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 1.3E-7 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02650 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 8.4E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 3.7E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 SUPERFAMILY SSF53901 266 389 5.47E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 Gene3D G3DSA:3.40.47.10 9 271 1.1E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 4.5E-73 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 62.075 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 7.3E-130 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 PIRSF PIRSF000429 3 390 1.6E-124 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 4.8E-192 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 SUPERFAMILY SSF53901 5 262 2.47E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_02820 cfd3f901b1f90d4adbc0d3cc271fa753 390 Gene3D G3DSA:3.40.47.10 138 384 1.1E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 PIRSF PIRSF000412 2 417 1.1E-169 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 SUPERFAMILY SSF53383 4 415 1.65E-184 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 Pfam PF00464 Serine hydroxymethyltransferase 7 385 4.9E-183 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.339 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 Gene3D G3DSA:3.40.640.10 36 288 5.1E-188 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_23060 8da0a5f98f3757e8036be348cea3580f 417 Gene3D G3DSA:3.90.1150.10 9 394 5.1E-188 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-26 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 Gene3D G3DSA:1.20.58.110 1 87 3.8E-28 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 3.2E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 5.0E-35 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.746 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16050 89add2ce7c62f165e69143b7c58e45cf 88 SUPERFAMILY SSF46992 3 86 2.22E-31 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 SUPERFAMILY SSF51735 22 192 2.22E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.636 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 Gene3D G3DSA:3.40.50.720 11 203 2.7E-61 T 12-10-2018 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 SUPERFAMILY SSF48179 195 347 8.84E-50 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 173 1.3E-49 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 Gene3D G3DSA:1.10.1040.10 205 351 9.4E-45 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 334 5.5E-46 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 3.1E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_22530 7ad65b796a07188c65ff87b5307238e3 357 PIRSF PIRSF000114 15 348 2.1E-103 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 564 3.4E-62 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Gene3D G3DSA:3.50.50.60 267 610 5.0E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 612 21.817 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Gene3D G3DSA:3.30.9.10 344 548 5.0E-80 T 12-10-2018 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 SUPERFAMILY SSF51971 264 592 1.65E-24 T 12-10-2018 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Pfam PF01266 FAD dependent oxidoreductase 267 586 4.7E-26 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 120 242 1.4E-36 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 ABD1_28660 a5c14da045630c4767c1238e560ef263 623 Gene3D G3DSA:3.40.50.150 10 250 3.1E-86 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 17 738 29.693 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Gene3D G3DSA:3.30.750.80 426 517 1.6E-33 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Gene3D G3DSA:3.40.50.150 518 737 2.0E-68 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 SMART SM00981 76 174 2.1E-7 T 12-10-2018 IPR004114 THUMP domain GO:0003723 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 PIRSF PIRSF037618 13 739 1.9E-287 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 511 695 7.9E-20 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Pfam PF02926 THUMP domain 39 161 7.3E-11 T 12-10-2018 IPR004114 THUMP domain GO:0003723 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 217 228 - T 12-10-2018 IPR000241 Putative RNA methylase domain ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 SUPERFAMILY SSF53335 429 737 1.76E-61 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 330 336 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 SUPERFAMILY SSF53335 169 392 6.06E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 327 339 3.0E-5 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 215 229 3.0E-5 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Gene3D G3DSA:3.40.50.150 189 394 6.1E-115 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Gene3D G3DSA:3.30.2130.30 19 276 6.1E-115 T 12-10-2018 ABD1_12000 6fc194be4b6e47ab7bcae6c0523b9820 741 Pfam PF01170 Putative RNA methylase family UPF0020 182 394 1.1E-35 T 12-10-2018 IPR000241 Putative RNA methylase domain ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 Pfam PF02540 NAD synthase 265 513 2.4E-71 T 12-10-2018 IPR022310 NAD/GMP synthase ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 Gene3D G3DSA:3.40.50.620 261 540 8.7E-111 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 SUPERFAMILY SSF56317 1 244 3.92E-60 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 SUPERFAMILY SSF52402 257 523 1.68E-76 T 12-10-2018 ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 PIRSF PIRSF006630 1 541 1.3E-206 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 Gene3D G3DSA:3.60.110.10 1 260 1.0E-110 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 270 513 1.8E-58 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 244 1.0E-30 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABD1_08060 0bf3ed2e4b2b590bc8a19092c03f0121 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.264 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 SUPERFAMILY SSF52540 1 200 5.32E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 PIRSF PIRSF006755 3 216 4.9E-59 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 Pfam PF13500 AAA domain 6 180 2.0E-34 T 12-10-2018 ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 215 25.298 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 2.2E-50 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABD1_07650 bddaddeea2150c99af434205a5e4222c 218 Gene3D G3DSA:3.40.50.300 1 209 9.9E-56 T 12-10-2018 ABD1_32690 747ef806fea48216a47312b073daada1 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 187.147 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ABD1_32690 747ef806fea48216a47312b073daada1 525 Pfam PF04262 Glutamate-cysteine ligase 18 388 1.3E-143 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ABD1_32690 747ef806fea48216a47312b073daada1 525 SUPERFAMILY SSF55931 10 521 2.03E-177 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABD1_32690 747ef806fea48216a47312b073daada1 525 Gene3D G3DSA:3.30.590.20 19 525 1.9E-174 T 12-10-2018 ABD1_32690 747ef806fea48216a47312b073daada1 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 18 523 1.3E-157 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ABD1_24780 981b0895a98e59361902ec21230389ec 378 Gene3D G3DSA:3.40.50.2000 6 371 1.5E-131 T 12-10-2018 ABD1_24780 981b0895a98e59361902ec21230389ec 378 SUPERFAMILY SSF53756 6 375 6.8E-113 T 12-10-2018 ABD1_24780 981b0895a98e59361902ec21230389ec 378 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 1.2E-111 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABD1_24780 981b0895a98e59361902ec21230389ec 378 Gene3D G3DSA:3.40.50.2000 191 360 1.5E-131 T 12-10-2018 ABD1_24780 981b0895a98e59361902ec21230389ec 378 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 375 7.2E-131 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 3 19 8.8E-11 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 33 49 8.8E-11 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 Gene3D G3DSA:2.20.28.10 1 54 1.7E-29 T 12-10-2018 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 SUPERFAMILY SSF57802 1 53 1.65E-23 T 12-10-2018 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 PIRSF PIRSF000071 1 54 3.1E-26 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 ABD1_09480 931e04fdbd921f77c625f5532e432f01 54 Pfam PF00301 Rubredoxin 3 49 3.2E-25 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 SUPERFAMILY SSF51182 21 209 2.22E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 SMART SM00342 170 252 1.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 SUPERFAMILY SSF46689 210 256 3.72E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 Gene3D G3DSA:2.60.120.10 18 98 4.9E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 Pfam PF12833 Helix-turn-helix domain 176 254 1.0E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 Gene3D G3DSA:1.10.10.60 156 258 6.5E-20 T 12-10-2018 ABD1_18090 e4e6d26bc2ce57ec1998b9d045957d69 262 Pfam PF02311 AraC-like ligand binding domain 30 137 4.3E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.70.1430 9 776 0.0 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.70.1440 624 825 0.0 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82866 766 987 3.4E-49 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82693 9 103 2.62E-23 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 7 25 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 406 429 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 298 321 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 353 377 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 579 593 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 325 346 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 PRINTS PR00702 Acriflavin resistance protein family signature 513 530 1.8E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:1.20.1640.10 474 982 0.0 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:1.20.1640.10 1 473 0.0 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82714 674 765 7.85E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82693 105 292 3.4E-22 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82866 258 458 1.09E-46 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82714 151 233 3.79E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 SUPERFAMILY SSF82693 527 619 5.23E-13 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Pfam PF00873 AcrB/AcrD/AcrF family 1 985 6.4E-265 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.2090.10 147 237 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.70.1320 103 294 0.0 T 12-10-2018 ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.2090.10 673 768 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_27630 8837783c3ea8b591ff99c2b3645c72db 1001 Gene3D G3DSA:3.30.70.1430 528 623 0.0 T 12-10-2018 ABD1_04020 f1700399638c3bf79a117ec0186a92dd 311 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 11 311 6.5E-90 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 ABD1_04020 f1700399638c3bf79a117ec0186a92dd 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 42.823 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 ABD1_04020 f1700399638c3bf79a117ec0186a92dd 311 PIRSF PIRSF026649 8 311 5.1E-89 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_04020 f1700399638c3bf79a117ec0186a92dd 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 302 3.5E-68 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 Gene3D G3DSA:3.30.420.40 3 313 8.2E-127 T 12-10-2018 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 2.2E-118 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 Pfam PF00814 Glycoprotease family 25 305 1.7E-102 T 12-10-2018 IPR000905 Gcp-like domain ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 64.139 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 SUPERFAMILY SSF53067 3 121 7.12E-30 T 12-10-2018 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 SUPERFAMILY SSF53067 101 307 3.88E-44 T 12-10-2018 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 3.0E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 Gene3D G3DSA:3.30.420.40 129 291 8.2E-127 T 12-10-2018 ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_22400 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.6E-49 T 12-10-2018 IPR017861 Kae1/TsaD family ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.230.10 73 165 1.2E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 162 3.5E-65 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54211 79 158 2.2E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.042 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 1.9E-29 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.6E-27 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 12-10-2018 ABD1_29490 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54768 7 75 9.42E-23 T 12-10-2018 ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 SUPERFAMILY SSF53901 23 240 2.72E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 Gene3D G3DSA:3.40.47.10 20 244 4.9E-28 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 79 240 1.3E-20 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 351 1.7E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 SMART SM00825 Beta-ketoacyl synthase 20 396 9.1E-7 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 SUPERFAMILY SSF53901 213 397 4.07E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_04920 4d2c2a0f593e231e3e99b9641e7ca94b 400 Gene3D G3DSA:3.40.47.10 249 395 2.5E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_13060 242942db891e1dbb175e61e15accae8b 178 Pfam PF02525 Flavodoxin-like fold 3 157 3.7E-34 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_13060 242942db891e1dbb175e61e15accae8b 178 Gene3D G3DSA:3.40.50.360 1 177 2.0E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_13060 242942db891e1dbb175e61e15accae8b 178 SUPERFAMILY SSF52218 3 173 4.59E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_19850 3f98be8c00cde85e56c78333ed8f2f2b 119 Pfam PF05666 Fels-1 Prophage Protein-like 25 60 2.8E-14 T 12-10-2018 IPR008617 Uncharacterised protein family, YcgJ ABD1_19850 3f98be8c00cde85e56c78333ed8f2f2b 119 Pfam PF05666 Fels-1 Prophage Protein-like 68 94 1.3E-9 T 12-10-2018 IPR008617 Uncharacterised protein family, YcgJ ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 Gene3D G3DSA:1.20.58.1700 287 358 2.8E-153 T 12-10-2018 ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 37 584 1.0E-233 T 12-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 Gene3D G3DSA:3.90.1300.10 36 433 2.8E-153 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 Pfam PF01425 Amidase 35 428 3.0E-88 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 Gene3D G3DSA:3.10.490.10 457 593 1.5E-51 T 12-10-2018 ABD1_13110 4f1924093e3a4bad5cf9638dddbe0681 603 SUPERFAMILY SSF75304 6 437 2.22E-103 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_22950 7df736ec211f829599ba3c05dfe0b06b 456 Pfam PF01136 Peptidase family U32 75 340 5.5E-96 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABD1_22950 7df736ec211f829599ba3c05dfe0b06b 456 Gene3D G3DSA:2.40.30.10 354 438 6.1E-10 T 12-10-2018 ABD1_22950 7df736ec211f829599ba3c05dfe0b06b 456 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABD1_22950 7df736ec211f829599ba3c05dfe0b06b 456 Pfam PF16325 Peptidase family U32 C-terminal domain 358 437 2.8E-20 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal ABD1_28170 05bc89e8d1a181e287f43e92909016e1 170 Gene3D G3DSA:3.50.100.10 57 155 2.2E-37 T 12-10-2018 ABD1_28170 05bc89e8d1a181e287f43e92909016e1 170 Gene3D G3DSA:3.10.20.10 4 56 2.2E-37 T 12-10-2018 ABD1_28170 05bc89e8d1a181e287f43e92909016e1 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 70 9.8E-20 T 12-10-2018 IPR011440 Domain of unknown function DUF1543 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 383 7.3E-11 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 4.0E-10 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 Gene3D G3DSA:2.40.110.10 126 238 1.6E-21 T 12-10-2018 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 SUPERFAMILY SSF56645 15 246 7.2E-32 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 Gene3D G3DSA:1.20.140.10 239 389 1.3E-17 T 12-10-2018 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 SUPERFAMILY SSF47203 236 384 1.55E-17 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_01190 b66d13cd76fcf21315971f9128e5e4a3 597 Gene3D G3DSA:1.10.540.10 28 123 5.9E-6 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SUPERFAMILY SSF55874 352 515 5.76E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 516 2.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 298 361 9.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SMART SM00387 406 518 6.4E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SMART SM00388 298 362 2.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 Gene3D G3DSA:1.10.287.130 304 363 1.6E-10 T 12-10-2018 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SMART SM00304 245 297 4.5E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SUPERFAMILY SSF47384 282 363 1.24E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 SUPERFAMILY SSF158472 247 293 7.72E-8 T 12-10-2018 ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 Gene3D G3DSA:3.30.565.10 369 518 6.9E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_28270 9d40f7aab2997bf103f3129affed1781 518 Gene3D G3DSA:1.20.1480.50 213 303 5.8E-10 T 12-10-2018 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 Pfam PF01546 Peptidase family M20/M25/M40 109 406 5.2E-16 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 53 406 4.5E-75 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 Gene3D G3DSA:3.30.70.360 229 347 6.5E-102 T 12-10-2018 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 Pfam PF07687 Peptidase dimerisation domain 236 321 1.1E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 Gene3D G3DSA:3.40.630.10 53 407 6.5E-102 T 12-10-2018 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 SUPERFAMILY SSF53187 39 454 1.26E-68 T 12-10-2018 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 PIRSF PIRSF005962 36 455 6.5E-98 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 ABD1_06790 bdb2d7afea277e419844e2e90255a93f 455 SUPERFAMILY SSF55031 231 334 2.54E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 SUPERFAMILY SSF82051 3 158 4.32E-57 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 Gene3D G3DSA:3.40.50.300 159 340 1.3E-48 T 12-10-2018 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 PIRSF PIRSF002401 1 381 5.3E-137 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.8E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.2E-144 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 Pfam PF01018 GTP1/OBG 4 158 1.1E-59 T 12-10-2018 IPR006169 GTP1/OBG domain ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 SUPERFAMILY SSF52540 151 337 2.96E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 Gene3D G3DSA:2.70.210.12 1 158 2.3E-60 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_24860 68d46adfcbd3e90410d848c49cd77f3f 406 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.618 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABD1_18120 f99e0dd9c279d5efacc6608f005a5759 336 Pfam PF01032 FecCD transport family 15 328 3.9E-77 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABD1_18120 f99e0dd9c279d5efacc6608f005a5759 336 SUPERFAMILY SSF81345 11 328 6.02E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_18120 f99e0dd9c279d5efacc6608f005a5759 336 Gene3D G3DSA:1.10.3470.10 6 335 6.2E-88 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_21560 659ba11c8a7a11d9464c21b08c84d349 334 SUPERFAMILY SSF51679 8 329 4.06E-88 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_21560 659ba11c8a7a11d9464c21b08c84d349 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 6.9E-128 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ABD1_21560 659ba11c8a7a11d9464c21b08c84d349 334 Pfam PF00296 Luciferase-like monooxygenase 23 247 5.5E-42 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABD1_21560 659ba11c8a7a11d9464c21b08c84d349 334 Gene3D G3DSA:3.20.20.30 4 332 3.3E-97 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF13184 NusA-like KH domain 235 301 1.2E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF69705 1 130 1.57E-32 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF08529 NusA N-terminal domain 4 128 2.3E-34 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF47794 427 493 3.45E-15 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:1.10.150.20 434 492 5.6E-22 T 12-10-2018 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF50249 137 204 1.31E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.1480.10 1 133 6.8E-35 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF54814 206 283 1.24E-28 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 7.1E-109 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.300.20 204 282 3.0E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF47794 360 421 2.04E-9 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF14520 Helix-hairpin-helix domain 435 490 1.7E-9 T 12-10-2018 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF54814 284 345 3.07E-10 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:2.40.50.140 140 203 1.9E-15 T 12-10-2018 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.300.20 283 352 6.8E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 SMART SM00316 138 203 9.9E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.845 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ABD1_03090 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:1.10.150.20 358 427 1.1E-15 T 12-10-2018 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 Gene3D G3DSA:3.40.50.1100 18 214 3.0E-172 T 12-10-2018 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 49.055 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 386 1.0E-48 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 2.9E-167 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 PIRSF PIRSF001413 2 401 1.8E-160 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 SUPERFAMILY SSF53686 11 397 1.83E-135 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_16850 9214dd2fffe386a4fc9725a7f267ea86 401 Gene3D G3DSA:3.40.50.1100 62 391 3.0E-172 T 12-10-2018 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 SUPERFAMILY SSF56645 36 280 8.51E-62 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:1.10.540.10 34 159 2.3E-21 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 3.9E-7 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 8.7E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:1.20.140.10 288 464 3.6E-41 T 12-10-2018 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:2.40.110.10 161 287 1.1E-29 T 12-10-2018 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.0E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 599 4.2E-31 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 SUPERFAMILY SSF47203 287 475 1.53E-45 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_29980 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 157 7.1E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_06200 0d0b54688e562a590762ad701bef886d 305 SUPERFAMILY SSF82861 28 109 5.1E-8 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABD1_06200 0d0b54688e562a590762ad701bef886d 305 Pfam PF00924 Mechanosensitive ion channel 70 270 6.7E-42 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABD1_06200 0d0b54688e562a590762ad701bef886d 305 Gene3D G3DSA:2.30.30.60 127 180 1.1E-8 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABD1_06200 0d0b54688e562a590762ad701bef886d 305 Gene3D G3DSA:3.30.70.100 182 275 1.4E-19 T 12-10-2018 ABD1_06200 0d0b54688e562a590762ad701bef886d 305 SUPERFAMILY SSF82689 183 277 1.57E-20 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABD1_06200 0d0b54688e562a590762ad701bef886d 305 SUPERFAMILY SSF50182 112 181 9.7E-13 T 12-10-2018 IPR010920 LSM domain superfamily ABD1_19820 fd78a068ec78289ec98cf6138f2fee1d 178 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 2.2E-33 T 12-10-2018 IPR000182 GNAT domain ABD1_19820 fd78a068ec78289ec98cf6138f2fee1d 178 SUPERFAMILY SSF55729 1 169 6.18E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_19820 fd78a068ec78289ec98cf6138f2fee1d 178 Gene3D G3DSA:3.40.630.30 1 156 5.1E-44 T 12-10-2018 ABD1_07690 6cd5771473697dee78cb6b3d1b181ca8 205 Pfam PF01300 Telomere recombination 22 197 1.6E-42 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 ABD1_07690 6cd5771473697dee78cb6b3d1b181ca8 205 SUPERFAMILY SSF55821 3 203 7.02E-59 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABD1_07690 6cd5771473697dee78cb6b3d1b181ca8 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 3.1E-59 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 ABD1_07690 6cd5771473697dee78cb6b3d1b181ca8 205 Gene3D G3DSA:3.90.870.10 2 205 5.2E-60 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 122 216 8.76E-11 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 461 482 5.1E-5 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 299 321 3.3E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 661 687 3.3E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 190 214 5.4E-8 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 239 265 5.7E-6 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 268 293 2.6E-5 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05658 Head domain of trimeric autotransporter adhesin 585 610 1.2E-4 T 12-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 237 374 2.75E-26 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 748 789 1.8E-8 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 352 376 1.2E-5 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1176 1216 3.6E-9 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 967 1007 3.6E-9 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:1.20.120.20 969 1099 1.2E-7 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 393 505 7.72E-14 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.150.10.10 524 611 2.6E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.150.10.10 381 523 2.0E-19 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:3.30.390.90 934 968 1.1E-18 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:3.30.390.90 1142 1181 1.1E-18 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:3.30.390.90 1351 1379 2.1E-9 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.150.10.10 104 227 1.7E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.60.40.4050 612 656 2.1E-5 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.150.10.10 658 802 3.7E-31 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 1130 1199 5.36E-10 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 921 990 6.67E-10 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.150.10.10 228 376 5.9E-32 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 614 770 4.97E-30 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 SUPERFAMILY SSF101967 521 622 6.67E-11 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.4E-10 T 12-10-2018 IPR024973 ESPR domain ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.40.128.100 840 933 2.1E-9 T 12-10-2018 ABD1_09870 399078b401c1ed0ee68e321b98aab036 1398 Gene3D G3DSA:2.40.128.100 1261 1350 3.5E-7 T 12-10-2018 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 SUPERFAMILY SSF53223 7 270 1.15E-110 T 12-10-2018 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 Gene3D G3DSA:3.40.50.720 269 564 2.6E-109 T 12-10-2018 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.8E-78 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 SMART SM00919 271 531 4.5E-132 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PIRSF PIRSF000106 4 563 9.9E-230 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 SUPERFAMILY SSF51735 271 562 5.35E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 Gene3D G3DSA:3.40.50.10380 16 268 6.3E-115 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.278 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 SMART SM01274 81 261 1.4E-107 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 5.5E-102 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 87 111 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 408 424 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 183 205 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 267 283 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 242 260 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 298 314 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_01430 235ebd96188192da9b370b23b3444fbc 565 PRINTS PR00072 Malic enzyme signature 147 176 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABD1_28630 c5203415a807670cfe2fca03a2f5165a 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.843 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 ABD1_28630 c5203415a807670cfe2fca03a2f5165a 204 Pfam PF04279 Intracellular septation protein A 1 201 2.1E-47 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.255 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 6.9E-36 T 12-10-2018 IPR027486 Ribosomal protein S10 domain ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 SMART SM01403 7 101 4.5E-55 T 12-10-2018 IPR027486 Ribosomal protein S10 domain ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.9E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 SUPERFAMILY SSF54999 5 101 1.31E-36 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 Gene3D G3DSA:3.30.70.600 1 103 7.2E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABD1_29670 30754b50b4a1c114facd78fddb6cd26e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 596 25.061 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 3.8E-21 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF47323 470 596 4.25E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Gene3D G3DSA:1.10.730.10 470 596 1.7E-34 T 12-10-2018 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF00750 tRNA synthetases class I (R) 221 444 7.3E-12 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF00750 tRNA synthetases class I (R) 102 177 2.5E-10 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF55190 19 111 1.96E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 SMART SM01016 3 91 1.3E-33 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Gene3D G3DSA:3.30.1360.70 1 111 1.6E-23 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 596 6.1E-130 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF52374 116 485 6.7E-81 T 12-10-2018 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 2.5E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 2.5E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 2.5E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 2.5E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 SMART SM00836 475 596 2.1E-53 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABD1_01420 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF05746 DALR anticodon binding domain 475 596 8.6E-34 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF54980 406 521 2.69E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Pfam PF03144 Elongation factor Tu domain 2 227 297 2.6E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Pfam PF00009 Elongation factor Tu GTP binding domain 5 202 2.6E-51 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.30.70.240 397 490 1.3E-133 T 12-10-2018 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 147 2.7E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.30.70.870 314 598 1.3E-133 T 12-10-2018 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 1.9E-285 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:2.40.30.10 207 307 2.6E-35 T 12-10-2018 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Pfam PF00679 Elongation factor G C-terminus 405 485 2.2E-23 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 SMART SM00838 406 491 0.003 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:2.40.50.250 491 607 1.3E-133 T 12-10-2018 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF54980 310 395 1.83E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.40.50.300 3 206 2.0E-62 T 12-10-2018 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF52540 4 227 7.02E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF50447 159 307 8.94E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_27800 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08260 2db988b48ccbc04b2c98754e8255d64f 270 Pfam PF13614 AAA domain 3 166 7.6E-22 T 12-10-2018 IPR025669 AAA domain ABD1_08260 2db988b48ccbc04b2c98754e8255d64f 270 PIRSF PIRSF003092 1 270 2.1E-88 T 12-10-2018 IPR025501 ATP binding protein MinD ABD1_08260 2db988b48ccbc04b2c98754e8255d64f 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-106 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 ABD1_08260 2db988b48ccbc04b2c98754e8255d64f 270 Gene3D G3DSA:3.40.50.300 1 259 4.6E-72 T 12-10-2018 ABD1_08260 2db988b48ccbc04b2c98754e8255d64f 270 SUPERFAMILY SSF52540 2 267 3.86E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29500 6b4749b553a9c6e7b58a986eb72a906a 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.93 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29500 6b4749b553a9c6e7b58a986eb72a906a 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 3.3E-39 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29500 6b4749b553a9c6e7b58a986eb72a906a 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 8.4E-41 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29500 6b4749b553a9c6e7b58a986eb72a906a 116 Gene3D G3DSA:3.30.420.100 2 116 1.8E-40 T 12-10-2018 ABD1_29500 6b4749b553a9c6e7b58a986eb72a906a 116 SUPERFAMILY SSF53137 4 114 2.4E-50 T 12-10-2018 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 Gene3D G3DSA:3.30.565.10 288 437 1.7E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 434 6.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 Gene3D G3DSA:1.10.287.130 169 280 2.4E-19 T 12-10-2018 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 SUPERFAMILY SSF47384 202 278 1.08E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 SUPERFAMILY SSF55874 286 435 2.1E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 SMART SM00387 326 437 5.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 5.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 5.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 SMART SM00388 218 280 2.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_26970 28ee4f5ccfca57a0355973491c688836 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 278 2.0E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 Gene3D G3DSA:3.30.700.10 57 165 1.1E-30 T 12-10-2018 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 SUPERFAMILY SSF54523 61 165 6.8E-26 T 12-10-2018 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 29 54 4.0E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 33 54 8.0E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 33 164 1.4E-45 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 33 53 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 PRINTS PR00813 Bacterial general secretion pathway protein G signature 34 59 1.0E-16 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 PRINTS PR00813 Bacterial general secretion pathway protein G signature 70 88 1.0E-16 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_03420 9c7254bb852a113cb39b80dee579ad29 167 Pfam PF08334 Type II secretion system (T2SS), protein G 57 164 4.1E-34 T 12-10-2018 IPR013545 Type II secretion system protein G ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.2E-29 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABD1_11170 757d61355fea375f34907e2bcc5f4770 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ABD1_26280 f721d372dbc1b97b1717fa366c901861 587 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 47 136 9.3E-31 T 12-10-2018 IPR032093 Phospholipase D, N-terminal ABD1_26280 f721d372dbc1b97b1717fa366c901861 587 Pfam PF09423 PhoD-like phosphatase 146 550 1.2E-121 T 12-10-2018 IPR018946 Alkaline phosphatase D-related ABD1_26280 f721d372dbc1b97b1717fa366c901861 587 SUPERFAMILY SSF56300 138 564 8.23E-35 T 12-10-2018 ABD1_26280 f721d372dbc1b97b1717fa366c901861 587 Gene3D G3DSA:2.60.40.380 39 139 1.7E-34 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 ABD1_24310 c99271ed36c438b806ffbea7052db241 320 Gene3D G3DSA:3.90.226.10 61 258 4.0E-40 T 12-10-2018 ABD1_24310 c99271ed36c438b806ffbea7052db241 320 Gene3D G3DSA:3.40.1750.20 159 223 4.0E-40 T 12-10-2018 ABD1_24310 c99271ed36c438b806ffbea7052db241 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 3.7E-32 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 ABD1_24310 c99271ed36c438b806ffbea7052db241 320 Pfam PF01343 Peptidase family S49 119 259 1.0E-41 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ABD1_24310 c99271ed36c438b806ffbea7052db241 320 SUPERFAMILY SSF52096 55 256 2.79E-25 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_08510 7221af514d778b910b18e66554feaa3b 371 Gene3D G3DSA:3.50.50.60 3 348 1.8E-78 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08510 7221af514d778b910b18e66554feaa3b 371 SUPERFAMILY SSF54373 221 306 9.94E-21 T 12-10-2018 ABD1_08510 7221af514d778b910b18e66554feaa3b 371 SUPERFAMILY SSF51905 1 365 1.94E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08510 7221af514d778b910b18e66554feaa3b 371 Gene3D G3DSA:3.30.9.10 88 307 1.8E-78 T 12-10-2018 ABD1_08510 7221af514d778b910b18e66554feaa3b 371 Pfam PF01266 FAD dependent oxidoreductase 2 346 1.8E-60 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_13590 ad19689f74c59a85fed92d637b8b045f 262 SUPERFAMILY SSF103359 127 260 4.97E-6 T 12-10-2018 IPR037181 Suppressor of fused, N-terminal Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 ABD1_13590 ad19689f74c59a85fed92d637b8b045f 262 Pfam PF05076 Suppressor of fused protein (SUFU) 74 256 6.8E-12 T 12-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 ABD1_13390 4228975437a884ada752997d61766817 250 SUPERFAMILY SSF46689 198 247 7.62E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_13390 4228975437a884ada752997d61766817 250 Pfam PF08448 PAS fold 30 135 5.9E-14 T 12-10-2018 IPR013656 PAS fold-4 ABD1_13390 4228975437a884ada752997d61766817 250 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 7.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_13390 4228975437a884ada752997d61766817 250 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 7.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_13390 4228975437a884ada752997d61766817 250 SUPERFAMILY SSF55785 15 131 4.19E-10 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_13390 4228975437a884ada752997d61766817 250 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 199 240 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_13390 4228975437a884ada752997d61766817 250 Gene3D G3DSA:1.10.10.60 147 249 2.4E-27 T 12-10-2018 ABD1_13390 4228975437a884ada752997d61766817 250 SMART SM00342 162 244 4.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_13390 4228975437a884ada752997d61766817 250 Pfam PF12833 Helix-turn-helix domain 169 245 8.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_13390 4228975437a884ada752997d61766817 250 Gene3D G3DSA:3.30.450.20 12 136 2.6E-14 T 12-10-2018 ABD1_13390 4228975437a884ada752997d61766817 250 SUPERFAMILY SSF46689 148 194 5.38E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_23890 c93e99cf2437a0ac7e5fbe6b719fee01 228 Gene3D G3DSA:2.60.120.10 9 228 5.0E-77 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_23890 c93e99cf2437a0ac7e5fbe6b719fee01 228 SUPERFAMILY SSF51182 4 227 3.35E-62 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_23890 c93e99cf2437a0ac7e5fbe6b719fee01 228 PIRSF PIRSF006232 1 226 1.8E-46 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABD1_23890 c93e99cf2437a0ac7e5fbe6b719fee01 228 Pfam PF02678 Pirin 13 119 2.9E-30 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABD1_23890 c93e99cf2437a0ac7e5fbe6b719fee01 228 Gene3D G3DSA:2.60.120.10 12 135 5.0E-77 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 2 940 26.829 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Pfam PF00176 SNF2 family N-terminal domain 177 349 1.3E-11 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Pfam PF12137 RNA polymerase recycling family C-terminal 582 939 1.3E-121 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Pfam PF00271 Helicase conserved C-terminal domain 469 577 6.0E-12 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 SMART SM00490 493 577 1.5E-14 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 SUPERFAMILY SSF52540 142 383 1.12E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 SUPERFAMILY SSF52540 279 616 1.47E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Gene3D G3DSA:2.30.30.930 56 117 3.1E-6 T 12-10-2018 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 SMART SM00487 153 352 5.1E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Gene3D G3DSA:3.40.50.300 434 609 7.9E-39 T 12-10-2018 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Gene3D G3DSA:3.30.360.80 688 759 2.2E-21 T 12-10-2018 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Gene3D G3DSA:2.30.30.140 2 54 3.9E-24 T 12-10-2018 ABD1_24490 8fcc2cc931ff228c7d8b439f9f84774b 942 Gene3D G3DSA:3.40.50.10810 153 424 1.3E-86 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ABD1_23370 66dc4656460e4be2db100aee0c208850 240 Gene3D G3DSA:3.40.1280.10 72 240 2.3E-51 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_23370 66dc4656460e4be2db100aee0c208850 240 PIRSF PIRSF015601 1 240 2.3E-60 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_23370 66dc4656460e4be2db100aee0c208850 240 Gene3D G3DSA:2.40.240.20 1 66 4.3E-20 T 12-10-2018 ABD1_23370 66dc4656460e4be2db100aee0c208850 240 SUPERFAMILY SSF75217 72 236 2.27E-47 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_23370 66dc4656460e4be2db100aee0c208850 240 Pfam PF04452 RNA methyltransferase 17 235 1.5E-69 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_23370 66dc4656460e4be2db100aee0c208850 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 237 1.6E-59 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_23370 66dc4656460e4be2db100aee0c208850 240 SUPERFAMILY SSF88697 1 69 4.72E-18 T 12-10-2018 IPR015947 PUA-like superfamily ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 Pfam PF00255 Glutathione peroxidase 5 111 9.9E-40 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 PIRSF PIRSF000303 1 181 4.4E-61 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 SUPERFAMILY SSF52833 3 180 1.56E-54 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.7E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 1.7E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.7E-18 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABD1_01600 e385fe24beef3184891863c78e6b6c32 181 Gene3D G3DSA:3.40.30.10 1 181 1.3E-61 T 12-10-2018 ABD1_31710 cae62cc3c47b25726ab59b7420ba5565 432 SUPERFAMILY SSF51905 2 411 7.59E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_31710 cae62cc3c47b25726ab59b7420ba5565 432 Pfam PF01593 Flavin containing amine oxidoreductase 10 265 4.0E-18 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABD1_31710 cae62cc3c47b25726ab59b7420ba5565 432 Gene3D G3DSA:3.50.50.60 1 281 7.5E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 275 2.8E-27 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 Pfam PF12833 Helix-turn-helix domain 33 109 2.0E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 SMART SM00342 26 108 1.4E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 246 252 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 SUPERFAMILY SSF53155 115 193 4.12E-14 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 SUPERFAMILY SSF46767 195 275 2.09E-28 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 196 275 2.6E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 Gene3D G3DSA:1.10.10.60 10 106 5.2E-18 T 12-10-2018 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 SUPERFAMILY SSF46689 11 60 4.3E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 Gene3D G3DSA:3.30.160.70 107 194 4.2E-16 T 12-10-2018 ABD1_02900 e075602b267ac40859a4f35c47bc7f64 284 Gene3D G3DSA:1.10.10.10 195 280 1.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_23360 72133025a138fd4b38351d19e022f58e 278 SUPERFAMILY SSF51730 3 276 3.73E-89 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like ABD1_23360 72133025a138fd4b38351d19e022f58e 278 Gene3D G3DSA:3.20.20.220 1 278 2.4E-93 T 12-10-2018 ABD1_23360 72133025a138fd4b38351d19e022f58e 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 2.9E-81 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ABD1_23360 72133025a138fd4b38351d19e022f58e 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 273 5.9E-94 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 ABD1_05210 32d529297a8357f638e49ecdcb6817df 270 SUPERFAMILY SSF51556 3 268 2.13E-67 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_05210 32d529297a8357f638e49ecdcb6817df 270 PIRSF PIRSF005902 1 270 5.1E-57 T 12-10-2018 IPR001130 TatD family GO:0016788 ABD1_05210 32d529297a8357f638e49ecdcb6817df 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABD1_05210 32d529297a8357f638e49ecdcb6817df 270 Pfam PF01026 TatD related DNase 4 267 1.1E-55 T 12-10-2018 IPR001130 TatD family GO:0016788 ABD1_05210 32d529297a8357f638e49ecdcb6817df 270 Gene3D G3DSA:3.20.20.140 1 268 4.3E-68 T 12-10-2018 ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 Gene3D G3DSA:1.10.10.10 2 75 2.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 SMART SM00346 3 94 0.001 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 SUPERFAMILY SSF55781 80 247 8.5E-28 T 12-10-2018 ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 Pfam PF01614 Bacterial transcriptional regulator 129 246 6.0E-12 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 Gene3D G3DSA:3.30.450.40 76 243 5.3E-23 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_02920 5d85888854d91ef3d3090d79d90d0510 257 SUPERFAMILY SSF46785 3 74 7.49E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00260 81e28e0caa9fe9daa4492ad8d6071b5d 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 382 79.937 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABD1_00260 81e28e0caa9fe9daa4492ad8d6071b5d 391 Pfam PF00296 Luciferase-like monooxygenase 1 327 1.7E-87 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABD1_00260 81e28e0caa9fe9daa4492ad8d6071b5d 391 Gene3D G3DSA:3.20.20.30 1 363 8.4E-144 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_00260 81e28e0caa9fe9daa4492ad8d6071b5d 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 2.0E-190 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABD1_00260 81e28e0caa9fe9daa4492ad8d6071b5d 391 SUPERFAMILY SSF51679 1 351 4.45E-96 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_23740 19d0cd623e1a6a14bd0d870035966a69 383 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 112 311 1.5E-24 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 ABD1_23740 19d0cd623e1a6a14bd0d870035966a69 383 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 12-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 ABD1_23740 19d0cd623e1a6a14bd0d870035966a69 383 Gene3D G3DSA:3.40.640.10 44 287 7.1E-54 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_23740 19d0cd623e1a6a14bd0d870035966a69 383 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 68.108 T 12-10-2018 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 ABD1_23740 19d0cd623e1a6a14bd0d870035966a69 383 SUPERFAMILY SSF53383 35 370 1.87E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_15800 215c4e9cdde0b0d9b1e31bb2c3df19a7 228 Pfam PF02224 Cytidylate kinase 6 222 2.5E-66 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABD1_15800 215c4e9cdde0b0d9b1e31bb2c3df19a7 228 Gene3D G3DSA:3.40.50.300 1 227 3.0E-76 T 12-10-2018 ABD1_15800 215c4e9cdde0b0d9b1e31bb2c3df19a7 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 220 2.8E-70 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABD1_15800 215c4e9cdde0b0d9b1e31bb2c3df19a7 228 Hamap MF_00238 Cytidylate kinase [cmk]. 4 225 32.527 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABD1_15800 215c4e9cdde0b0d9b1e31bb2c3df19a7 228 SUPERFAMILY SSF52540 4 224 2.64E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF52540 75 352 8.75E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 SMART SM00382 140 331 3.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.5E-62 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 5.6E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF47917 349 463 3.4E-53 T 12-10-2018 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF50615 2 73 8.11E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:3.40.50.300 74 348 1.8E-112 T 12-10-2018 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 3.1E-253 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:2.40.10.170 1 73 7.2E-30 T 12-10-2018 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:1.10.1140.10 349 464 9.5E-58 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABD1_01570 754b2ac80b8a8892fca39420b5acc2a7 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.828 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABD1_19750 cc8d64c4b328c6e8216df16749bf13bc 209 Gene3D G3DSA:3.90.1680.10 1 208 9.7E-47 T 12-10-2018 IPR036590 SOS response associated peptidase-like ABD1_19750 cc8d64c4b328c6e8216df16749bf13bc 209 Pfam PF02586 SOS response associated peptidase (SRAP) 23 187 9.7E-22 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) ABD1_19750 cc8d64c4b328c6e8216df16749bf13bc 209 SUPERFAMILY SSF143081 22 201 4.58E-44 T 12-10-2018 IPR036590 SOS response associated peptidase-like ABD1_25940 479006e03bd898c605ec338aec7a90da 802 Pfam PF01568 Molydopterin dinucleotide binding domain 665 772 2.5E-9 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 26 776 2.1E-286 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 Gene3D G3DSA:3.40.50.740 122 206 1.3E-7 T 12-10-2018 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 SUPERFAMILY SSF53706 60 644 1.57E-146 T 12-10-2018 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 Gene3D G3DSA:3.40.50.740 437 516 1.6E-5 T 12-10-2018 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 Gene3D G3DSA:3.40.228.10 207 436 5.0E-57 T 12-10-2018 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 Pfam PF00384 Molybdopterin oxidoreductase 122 503 5.5E-25 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 PIRSF PIRSF000144 5 781 0.0 T 12-10-2018 ABD1_25940 479006e03bd898c605ec338aec7a90da 802 SUPERFAMILY SSF50692 662 782 2.71E-14 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 SUPERFAMILY SSF51905 4 399 3.33E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 Pfam PF03486 HI0933-like protein 7 397 4.7E-141 T 12-10-2018 ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 Gene3D G3DSA:1.10.8.260 265 327 9.7E-123 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 1.3E-7 T 12-10-2018 ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.3E-7 T 12-10-2018 ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-7 T 12-10-2018 ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 Gene3D G3DSA:3.50.50.60 9 393 9.7E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 397 1.5E-121 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 Gene3D G3DSA:2.40.30.10 192 344 9.7E-123 T 12-10-2018 ABD1_07260 58d22cfb147fd2174c475a931b11940b 399 SUPERFAMILY SSF160996 194 345 3.79E-34 T 12-10-2018 ABD1_16920 f2a7c293d3424e11a5823444a914d520 320 Gene3D G3DSA:3.40.50.970 1 320 4.0E-112 T 12-10-2018 ABD1_16920 f2a7c293d3424e11a5823444a914d520 320 SUPERFAMILY SSF52518 2 319 2.58E-91 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_16920 f2a7c293d3424e11a5823444a914d520 320 Pfam PF00676 Dehydrogenase E1 component 14 309 6.3E-85 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABD1_13280 bba35ffedbe3539a15d8b90401b7e440 152 Gene3D G3DSA:3.40.630.30 4 148 2.2E-39 T 12-10-2018 ABD1_13280 bba35ffedbe3539a15d8b90401b7e440 152 Pfam PF00583 Acetyltransferase (GNAT) family 45 135 2.0E-18 T 12-10-2018 IPR000182 GNAT domain ABD1_13280 bba35ffedbe3539a15d8b90401b7e440 152 SUPERFAMILY SSF55729 7 136 3.22E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 SUPERFAMILY SSF56645 22 213 1.09E-21 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 Gene3D G3DSA:2.40.110.10 120 212 7.4E-21 T 12-10-2018 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 Gene3D G3DSA:1.20.140.10 214 387 4.4E-28 T 12-10-2018 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 Gene3D G3DSA:1.10.540.10 12 118 3.6E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 PIRSF PIRSF016578 2 388 1.3E-88 T 12-10-2018 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 SUPERFAMILY SSF47203 231 371 1.54E-11 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 96 7.6E-5 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_18860 4a17b331f937b6d17ca7716c35774355 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 238 367 2.8E-21 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 Gene3D G3DSA:2.40.50.620 34 95 1.0E-15 T 12-10-2018 ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.688 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 4.6E-86 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 Pfam PF00297 Ribosomal protein L3 51 185 3.1E-14 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 Gene3D G3DSA:2.40.30.10 132 212 2.4E-14 T 12-10-2018 ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site ABD1_29660 cd2aaa5092bf4460911188f6f169176b 212 SUPERFAMILY SSF50447 2 211 6.62E-78 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_17260 8a713207c9156f825793eea3ea007c97 213 Pfam PF01144 Coenzyme A transferase 7 199 1.4E-44 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_17260 8a713207c9156f825793eea3ea007c97 213 SUPERFAMILY SSF100950 3 209 3.18E-75 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_17260 8a713207c9156f825793eea3ea007c97 213 SMART SM00882 6 202 1.3E-77 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_17260 8a713207c9156f825793eea3ea007c97 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.6E-99 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABD1_17260 8a713207c9156f825793eea3ea007c97 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ABD1_17260 8a713207c9156f825793eea3ea007c97 213 Gene3D G3DSA:3.40.1080.10 2 210 2.0E-103 T 12-10-2018 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:1.10.268.10 368 496 4.1E-222 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 872 23.799 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:3.90.199.10 31 524 4.1E-222 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SMART SM00434 9 502 3.0E-271 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 870 0.0 T 12-10-2018 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:2.120.10.90 533 871 5.5E-116 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SUPERFAMILY SSF101904 536 880 4.05E-100 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SUPERFAMILY SSF56719 28 525 3.79E-176 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 691 8.8E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 774 820 7.8E-16 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 739 2.1E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 640 3.9E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 543 587 3.5E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 825 870 8.6E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:3.30.1360.40 234 331 4.1E-222 T 12-10-2018 ABD1_25790 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 1.4E-153 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_12080 a515d2edbec37b901783a3d0c24f1673 815 Pfam PF00932 Lamin Tail Domain 27 132 3.7E-12 T 12-10-2018 IPR001322 Lamin tail domain ABD1_12080 a515d2edbec37b901783a3d0c24f1673 815 SUPERFAMILY SSF56219 466 781 4.61E-30 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_12080 a515d2edbec37b901783a3d0c24f1673 815 Gene3D G3DSA:3.60.10.10 467 780 4.9E-38 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_p00050 ff7154c4fc99315bd7c6ccc5e16b7002 100 Gene3D G3DSA:1.10.260.40 13 89 2.3E-12 T 12-10-2018 ABD1_p00050 ff7154c4fc99315bd7c6ccc5e16b7002 100 SMART SM00530 32 87 9.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_p00050 ff7154c4fc99315bd7c6ccc5e16b7002 100 SUPERFAMILY SSF47413 20 92 4.83E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_p00050 ff7154c4fc99315bd7c6ccc5e16b7002 100 Pfam PF13744 Helix-turn-helix domain 14 89 3.6E-12 T 12-10-2018 IPR039554 HigA2-like, helix-turn-helix domain ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 43.003 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 35 179 1.7E-68 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 Gene3D G3DSA:3.40.50.12280 19 190 2.7E-70 T 12-10-2018 ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 4.4E-22 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07050 45b4a72cc2b5cb189829f4279a1274f5 225 SUPERFAMILY SSF56770 42 182 7.72E-64 T 12-10-2018 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:1.10.8.10 1 56 5.4E-25 T 12-10-2018 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:1.10.286.20 188 234 3.3E-37 T 12-10-2018 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:3.30.479.20 153 268 3.3E-37 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Pfam PF00889 Elongation factor TS 71 269 1.1E-61 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 1.6E-95 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:3.30.479.20 57 148 1.2E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 SUPERFAMILY SSF54713 57 269 9.81E-44 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 73.753 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 SUPERFAMILY SSF46934 4 54 4.76E-18 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 ABD1_23230 dbc095092f00b69109bda7bc72543d0c 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_03650 5bec3da629ff6f19c493ebad9e42765f 431 PIRSF PIRSF006603 1 430 5.7E-59 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_03650 5bec3da629ff6f19c493ebad9e42765f 431 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 403 5.5E-87 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_03650 5bec3da629ff6f19c493ebad9e42765f 431 Pfam PF01554 MatE 229 388 5.1E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_03650 5bec3da629ff6f19c493ebad9e42765f 431 Pfam PF01554 MatE 3 162 2.0E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF14814 Bifunctional transglycosylase second domain 58 141 3.2E-20 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 20 734 3.6E-240 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 680 5.7E-26 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:3.40.710.10 48 705 5.6E-244 T 12-10-2018 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF00912 Transglycosylase 153 323 2.7E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:3.30.2060.10 56 144 5.6E-244 T 12-10-2018 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 157 694 3.4E-155 T 12-10-2018 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 PIRSF PIRSF002799 1 785 4.7E-304 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 SUPERFAMILY SSF53955 146 345 3.09E-68 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 SUPERFAMILY SSF56601 305 749 4.55E-115 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_22820 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:1.10.3810.10 145 347 5.6E-244 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_24530 f3bec469c6aad6a9c05497b17161f50f 203 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 203 22.176 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_24530 f3bec469c6aad6a9c05497b17161f50f 203 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 187 1.5E-48 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_24530 f3bec469c6aad6a9c05497b17161f50f 203 Pfam PF02581 Thiamine monophosphate synthase 4 183 6.9E-53 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_24530 f3bec469c6aad6a9c05497b17161f50f 203 Gene3D G3DSA:3.20.20.70 2 203 1.9E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_24530 f3bec469c6aad6a9c05497b17161f50f 203 SUPERFAMILY SSF51391 3 187 2.88E-50 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF57938 134 209 1.31E-21 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF46565 1 106 1.57E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF00684 DnaJ central domain 147 207 9.7E-14 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF01556 DnaJ C terminal domain 121 332 4.2E-41 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 42 62 7.3E-34 T 12-10-2018 IPR001623 DnaJ domain ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 62 81 7.3E-34 T 12-10-2018 IPR001623 DnaJ domain ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 7 25 7.3E-34 T 12-10-2018 IPR001623 DnaJ domain ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 25 40 7.3E-34 T 12-10-2018 IPR001623 DnaJ domain ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 1.1E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF49493 113 260 8.37E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF49493 258 343 5.49E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 SMART SM00271 4 62 1.8E-35 T 12-10-2018 IPR001623 DnaJ domain ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.10.230.10 147 207 3.9E-37 T 12-10-2018 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.127 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.60.260.20 117 248 3.9E-37 T 12-10-2018 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:1.10.287.110 1 114 5.4E-40 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.60.260.20 253 364 1.9E-28 T 12-10-2018 ABD1_33480 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF00226 DnaJ domain 5 67 2.7E-30 T 12-10-2018 IPR001623 DnaJ domain ABD1_05430 4bf351eb45c51b3c41f621d212a03d0e 349 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 1.2E-145 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_05430 4bf351eb45c51b3c41f621d212a03d0e 349 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.2E-133 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_05430 4bf351eb45c51b3c41f621d212a03d0e 349 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.4E-130 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_05430 4bf351eb45c51b3c41f621d212a03d0e 349 Gene3D G3DSA:3.40.630.30 1 272 4.5E-110 T 12-10-2018 ABD1_05430 4bf351eb45c51b3c41f621d212a03d0e 349 SUPERFAMILY SSF55729 1 338 5.77E-122 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_33100 450333d3937abe372e083e7040d425b4 250 SMART SM00345 26 85 9.2E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33100 450333d3937abe372e083e7040d425b4 250 Gene3D G3DSA:3.40.1410.10 105 239 1.5E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_33100 450333d3937abe372e083e7040d425b4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33100 450333d3937abe372e083e7040d425b4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33100 450333d3937abe372e083e7040d425b4 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 4.6E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33100 450333d3937abe372e083e7040d425b4 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 2.9E-100 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 ABD1_33100 450333d3937abe372e083e7040d425b4 250 SUPERFAMILY SSF46785 16 89 8.91E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33100 450333d3937abe372e083e7040d425b4 250 SUPERFAMILY SSF64288 110 249 3.14E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_33100 450333d3937abe372e083e7040d425b4 250 SMART SM00866 106 243 5.1E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_33100 450333d3937abe372e083e7040d425b4 250 Gene3D G3DSA:1.10.10.10 18 86 4.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_33100 450333d3937abe372e083e7040d425b4 250 Pfam PF07702 UTRA domain 107 242 3.5E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 SUPERFAMILY SSF53067 201 376 9.07E-47 T 12-10-2018 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 SUPERFAMILY SSF100934 503 614 5.49E-30 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Gene3D G3DSA:3.90.640.10 239 311 1.0E-112 T 12-10-2018 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 SUPERFAMILY SSF53067 19 194 2.05E-54 T 12-10-2018 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 6.8E-53 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 9.8E-265 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Gene3D G3DSA:1.20.1270.10 519 614 6.3E-24 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 SUPERFAMILY SSF100920 383 536 2.09E-48 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.654 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Pfam PF00012 Hsp70 protein 21 594 1.5E-174 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Gene3D G3DSA:3.30.420.40 22 374 1.0E-112 T 12-10-2018 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Gene3D G3DSA:3.30.420.40 191 361 1.0E-112 T 12-10-2018 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABD1_16150 b65c1827dde14775acbb7dfeb06a757c 619 Gene3D G3DSA:2.60.34.10 380 518 6.5E-48 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABD1_22460 eb8e4b223118b8bfde136560a6314df6 564 Gene3D G3DSA:3.30.2010.10 27 118 2.8E-14 T 12-10-2018 ABD1_22460 eb8e4b223118b8bfde136560a6314df6 564 Pfam PF01435 Peptidase family M48 43 253 2.8E-6 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABD1_29640 f26acbe57a8e705ccbad17db0801a2bc 106 Pfam PF00276 Ribosomal protein L23 9 93 1.4E-28 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABD1_29640 f26acbe57a8e705ccbad17db0801a2bc 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.2 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABD1_29640 f26acbe57a8e705ccbad17db0801a2bc 106 Gene3D G3DSA:3.30.70.330 1 97 1.0E-32 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABD1_29640 f26acbe57a8e705ccbad17db0801a2bc 106 SUPERFAMILY SSF54189 2 91 3.24E-31 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 877 5.7E-192 T 12-10-2018 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Gene3D G3DSA:1.10.486.10 510 730 5.8E-114 T 12-10-2018 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 SUPERFAMILY SSF52540 3 407 4.51E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Gene3D G3DSA:3.40.50.10930 2 108 6.0E-11 T 12-10-2018 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 PIRSF PIRSF000980 2 1198 8.7E-156 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Gene3D G3DSA:3.40.50.10930 200 387 7.0E-34 T 12-10-2018 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 SUPERFAMILY SSF52540 416 886 1.9E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 SUPERFAMILY SSF52980 897 1208 1.66E-45 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1211 14.339 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ABD1_03280 8fc9512dc4e6ba2df5cf72a9ea15f67a 1211 Gene3D G3DSA:3.40.50.300 396 878 5.8E-114 T 12-10-2018 ABD1_12630 892049fee891372b16038e5a48323d9f 248 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 11 247 4.0E-120 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 ABD1_12630 892049fee891372b16038e5a48323d9f 248 Gene3D G3DSA:3.40.50.300 9 248 2.5E-69 T 12-10-2018 ABD1_12630 892049fee891372b16038e5a48323d9f 248 Pfam PF00005 ABC transporter 26 173 3.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_12630 892049fee891372b16038e5a48323d9f 248 SMART SM00382 35 220 3.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_12630 892049fee891372b16038e5a48323d9f 248 SUPERFAMILY SSF52540 11 244 3.59E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_12630 892049fee891372b16038e5a48323d9f 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 243 5.7E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ABD1_12630 892049fee891372b16038e5a48323d9f 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_27570 20d9e0f462ec5b41698572ac1da33520 692 SMART SM00283 428 689 6.2E-89 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABD1_27570 20d9e0f462ec5b41698572ac1da33520 692 Gene3D G3DSA:1.10.287.950 365 691 4.6E-65 T 12-10-2018 ABD1_27570 20d9e0f462ec5b41698572ac1da33520 692 SUPERFAMILY SSF58104 388 690 2.75E-70 T 12-10-2018 ABD1_27570 20d9e0f462ec5b41698572ac1da33520 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 657 1.3E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 Gene3D G3DSA:3.50.50.60 327 504 1.1E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 SUPERFAMILY SSF51905 24 230 1.86E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 22 44 1.2E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 183 207 1.2E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 152 1.2E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 25 222 1.4E-15 T 12-10-2018 ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 Gene3D G3DSA:3.50.50.60 6 180 4.5E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_11100 969a95834067c52fdba0c07f80891ae0 516 SUPERFAMILY SSF51905 291 478 3.24E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03540 a8e05f4b790bc2e425a66a366b9502a0 214 Gene3D G3DSA:3.60.15.10 2 210 9.7E-76 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_03540 a8e05f4b790bc2e425a66a366b9502a0 214 SMART SM00849 13 193 4.5E-41 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_03540 a8e05f4b790bc2e425a66a366b9502a0 214 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 1.3E-29 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_03540 a8e05f4b790bc2e425a66a366b9502a0 214 SUPERFAMILY SSF56281 3 209 3.54E-56 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 7.7E-72 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 Gene3D G3DSA:3.40.50.1950 4 194 3.7E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 SUPERFAMILY SSF102645 198 415 1.7E-73 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 Gene3D G3DSA:3.40.50.10300 197 417 8.6E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 SUPERFAMILY SSF52507 7 185 2.35E-63 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 Pfam PF02441 Flavoprotein 11 182 1.1E-48 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ABD1_28590 64f9814553ab7046f11b6efca6f95735 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 410 1.0E-145 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF01131 DNA topoisomerase 178 583 1.2E-127 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SMART SM00437 291 545 2.0E-122 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SMART SM00436 153 241 2.6E-48 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 328 342 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SUPERFAMILY SSF57783 758 820 3.91E-15 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:1.10.290.10 299 423 6.8E-158 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:1.10.460.10 185 589 6.8E-158 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF01751 Toprim domain 24 162 6.7E-32 T 12-10-2018 IPR006171 TOPRIM domain ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:2.20.25.10 822 878 5.6E-22 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 838 877 9.0E-17 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 772 807 8.7E-12 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SUPERFAMILY SSF57783 823 877 2.38E-17 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:2.70.20.10 233 491 6.8E-158 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SUPERFAMILY SSF57783 597 638 1.28E-10 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SUPERFAMILY SSF57783 716 756 1.24E-6 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 638 1.3E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 727 758 5.8E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:3.30.65.10 597 663 3.6E-6 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:3.30.65.10 713 758 6.7E-7 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:3.30.65.10 759 821 6.8E-22 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 126 139 3.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 409 425 3.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 508 522 3.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 211 229 3.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 333 342 3.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SMART SM00493 22 152 1.4E-29 T 12-10-2018 IPR006171 TOPRIM domain ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 24 648 1.1E-244 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 SUPERFAMILY SSF56712 23 625 1.7E-201 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Gene3D G3DSA:3.40.50.140 20 183 5.4E-67 T 12-10-2018 ABD1_04090 1cd5a0acfb9b9d620a3317de913aed04 878 Hamap MF_00952 DNA topoisomerase 1 [topA]. 22 748 55.592 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ABD1_00990 32b9353ee1b608a648b77a21e82a9c70 119 SUPERFAMILY SSF55298 7 118 9.11E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_00990 32b9353ee1b608a648b77a21e82a9c70 119 Gene3D G3DSA:3.30.1330.40 1 119 3.0E-34 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_00990 32b9353ee1b608a648b77a21e82a9c70 119 Pfam PF01042 Endoribonuclease L-PSP 16 117 1.2E-21 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 219 3.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 Gene3D G3DSA:3.40.50.1820 3 260 5.7E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19090 2b1d871298ccbef41555047309ec502f 261 Pfam PF00561 alpha/beta hydrolase fold 24 241 9.2E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_19090 2b1d871298ccbef41555047309ec502f 261 SUPERFAMILY SSF53474 9 259 7.82E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19090 2b1d871298ccbef41555047309ec502f 261 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 18 259 8.5E-84 T 12-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.40.50.300 1 161 1.6E-43 T 12-10-2018 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF01926 50S ribosome-binding GTPase 179 296 9.4E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.30.300.20 352 434 5.4E-21 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 SUPERFAMILY SSF52540 137 438 8.93E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Hamap MF_00195 GTPase Der [der]. 2 435 38.228 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.3E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.3E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PIRSF PIRSF006485 1 440 5.3E-174 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.40.50.300 171 351 6.8E-49 T 12-10-2018 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 1.1E-179 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 4.6E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 339 1.6E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 5.6E-27 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like ABD1_04770 cfeb391cb6bcad7c6c35c769e3f4fed9 469 SUPERFAMILY SSF52540 4 168 1.81E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 SUPERFAMILY SSF56784 1 210 2.0E-31 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 Gene3D G3DSA:3.40.50.1000 3 211 8.9E-70 T 12-10-2018 IPR023214 HAD superfamily ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 5.4E-20 T 12-10-2018 ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 6.4E-39 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.6E-31 T 12-10-2018 ABD1_03840 e78d83d7981f053b4221934fcc88bbcf 216 Gene3D G3DSA:1.20.1440.100 15 88 8.9E-70 T 12-10-2018 ABD1_31730 e23421225992d8a20ad728c53d5fbc3e 208 SUPERFAMILY SSF52499 5 201 3.01E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_31730 e23421225992d8a20ad728c53d5fbc3e 208 Pfam PF00857 Isochorismatase family 14 165 2.8E-23 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_31730 e23421225992d8a20ad728c53d5fbc3e 208 Gene3D G3DSA:3.40.50.850 1 208 4.3E-60 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 87 8.1E-15 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 Gene3D G3DSA:1.10.150.130 4 107 4.4E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 286 46.583 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 Gene3D G3DSA:1.10.443.10 112 287 1.5E-55 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 Pfam PF00589 Phage integrase family 127 286 3.4E-42 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_25820 486e8fcade782691ff45f1b445297c9c 287 SUPERFAMILY SSF56349 7 286 6.18E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_19890 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 111 158 1.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19890 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 21 65 1.1E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19890 a17d5642270db3a30113982d44e6e436 160 Pfam PF02631 RecX family 45 157 8.5E-29 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ABD1_19890 a17d5642270db3a30113982d44e6e436 160 Hamap MF_01114 Regulatory protein RecX [recX]. 17 160 13.326 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ABD1_19890 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 67 110 2.7E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_28910 b9f8249e0737fc1ebb7cbd0b6b84cddd 217 SUPERFAMILY SSF47616 86 204 1.21E-16 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_28910 b9f8249e0737fc1ebb7cbd0b6b84cddd 217 Gene3D G3DSA:1.20.1050.10 87 195 1.5E-59 T 12-10-2018 ABD1_28910 b9f8249e0737fc1ebb7cbd0b6b84cddd 217 Gene3D G3DSA:3.40.30.10 11 203 1.5E-59 T 12-10-2018 ABD1_28910 b9f8249e0737fc1ebb7cbd0b6b84cddd 217 SUPERFAMILY SSF52833 6 87 2.16E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_28910 b9f8249e0737fc1ebb7cbd0b6b84cddd 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 4.5E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_21530 d82d4e44c0211f09457820dba967259c 300 Gene3D G3DSA:3.40.190.290 95 298 6.4E-59 T 12-10-2018 ABD1_21530 d82d4e44c0211f09457820dba967259c 300 Gene3D G3DSA:1.10.10.10 7 92 2.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_21530 d82d4e44c0211f09457820dba967259c 300 Pfam PF03466 LysR substrate binding domain 93 295 6.1E-40 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_21530 d82d4e44c0211f09457820dba967259c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_21530 d82d4e44c0211f09457820dba967259c 300 SUPERFAMILY SSF46785 9 89 1.36E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_21530 d82d4e44c0211f09457820dba967259c 300 SUPERFAMILY SSF53850 93 297 7.45E-41 T 12-10-2018 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Gene3D G3DSA:1.10.1160.10 285 363 5.1E-33 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Gene3D G3DSA:2.40.240.10 364 567 1.9E-79 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 SUPERFAMILY SSF52374 52 370 3.66E-96 T 12-10-2018 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 549 7.2E-58 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 53 570 7.3E-229 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 51 361 3.9E-108 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Gene3D G3DSA:2.40.240.10 372 486 1.9E-79 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 SUPERFAMILY SSF50715 364 569 2.88E-70 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Gene3D G3DSA:3.90.800.10 125 233 1.3E-102 T 12-10-2018 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Gene3D G3DSA:3.40.50.620 52 271 1.3E-102 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 570 50.5 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 234 244 3.2E-7 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 67 3.2E-7 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_21070 0cbd28f65d5d6beeec604ddc23fa513f 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 84 97 3.2E-7 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_24250 2841354a27f954bf993f320617d83da6 162 Gene3D G3DSA:3.90.79.10 1 151 3.7E-38 T 12-10-2018 ABD1_24250 2841354a27f954bf993f320617d83da6 162 Pfam PF00293 NUDIX domain 7 127 5.6E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_24250 2841354a27f954bf993f320617d83da6 162 SUPERFAMILY SSF55811 3 148 2.3E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_24250 2841354a27f954bf993f320617d83da6 162 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 Gene3D G3DSA:1.10.10.60 160 264 1.2E-23 T 12-10-2018 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 Gene3D G3DSA:2.60.120.10 11 98 1.0E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 SUPERFAMILY SSF46689 215 261 2.4E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 256 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 244 2.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 260 2.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 SUPERFAMILY SSF51182 16 208 1.35E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 SMART SM00342 178 260 5.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 Pfam PF02311 AraC-like ligand binding domain 33 140 1.2E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABD1_29230 6287322ca31815ef4ad0931d94a5b490 264 Pfam PF12833 Helix-turn-helix domain 184 261 1.2E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.495 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 2.0E-33 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.1E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.8E-40 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 Gene3D G3DSA:2.60.15.10 2 89 3.6E-29 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 SUPERFAMILY SSF51344 3 85 4.32E-25 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 Gene3D G3DSA:1.20.5.440 90 132 1.8E-7 T 12-10-2018 ABD1_01580 80ab3c8907698cc7cf2bf8d805b395d5 139 SUPERFAMILY SSF46604 87 135 1.33E-10 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 PIRSF PIRSF000774 1 481 1.1E-143 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 Pfam PF04552 Sigma-54, DNA binding domain 323 479 6.0E-69 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding ABD1_06300 7402a68949309f004e541c019fae4fbf 482 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 479 2.3E-153 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 460 467 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 Gene3D G3DSA:1.10.10.1330 115 252 5.1E-21 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ABD1_06300 7402a68949309f004e541c019fae4fbf 482 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 6.8E-14 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 PRINTS PR00045 Sigma-54 factor signature 381 393 5.0E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 PRINTS PR00045 Sigma-54 factor signature 192 209 5.0E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 PRINTS PR00045 Sigma-54 factor signature 455 473 5.0E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 PRINTS PR00045 Sigma-54 factor signature 397 408 5.0E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 Gene3D G3DSA:1.10.10.60 422 480 1.2E-25 T 12-10-2018 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 369 388 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABD1_06300 7402a68949309f004e541c019fae4fbf 482 Pfam PF04963 Sigma-54 factor, core binding domain 111 308 1.5E-53 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 Gene3D G3DSA:1.10.287.130 165 275 3.3E-20 T 12-10-2018 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 422 3.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 SMART SM00387 316 424 8.5E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 SMART SM00304 168 221 5.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 Gene3D G3DSA:3.30.565.10 282 429 2.8E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 SUPERFAMILY SSF55874 278 424 3.41E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 Pfam PF00672 HAMP domain 168 213 1.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 SMART SM00388 222 280 9.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 272 1.8E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_31100 ea5c53ef26f686ac0d2d1c93a2920496 447 SUPERFAMILY SSF47384 206 278 5.89E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 Gene3D G3DSA:3.40.50.12780 1 437 3.6E-162 T 12-10-2018 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 533 1.0E-249 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 Gene3D G3DSA:3.30.300.310 438 541 8.7E-27 T 12-10-2018 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 SUPERFAMILY SSF56801 11 536 8.63E-124 T 12-10-2018 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 Pfam PF00501 AMP-binding enzyme 38 442 1.4E-77 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_23760 bbf133537ace119b736ab3c40e2d3630 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 1.3E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 Pfam PF13522 Glutamine amidotransferase domain 65 208 6.3E-16 T 12-10-2018 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.669 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 Pfam PF00156 Phosphoribosyl transferase domain 276 395 8.4E-10 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 Gene3D G3DSA:3.60.20.10 2 468 3.3E-149 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 SUPERFAMILY SSF53271 251 486 6.29E-71 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 Gene3D G3DSA:3.40.50.2020 276 446 3.3E-149 T 12-10-2018 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 467 3.8E-156 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 PIRSF PIRSF000485 1 484 1.9E-163 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABD1_22470 0ba795834e72d32da6ba245a127cbf66 513 SUPERFAMILY SSF56235 2 258 3.77E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 Gene3D G3DSA:3.30.300.30 414 527 2.9E-22 T 12-10-2018 ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 Pfam PF00501 AMP-binding enzyme 16 421 1.0E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 1.7E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 SUPERFAMILY SSF56801 7 517 4.97E-134 T 12-10-2018 ABD1_01110 bf9e2692641c6cbea6bf2d8334c8fcc0 530 Gene3D G3DSA:3.40.50.12780 3 413 1.0E-108 T 12-10-2018 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 Hamap MF_01201 Alanine racemase. 1 356 31.59 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 SMART SM01005 233 356 5.9E-61 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 SUPERFAMILY SSF50621 226 354 1.05E-45 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 192 219 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 60 78 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 26 42 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 266 281 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 287 304 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 155 166 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 338 351 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 123 135 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 PRINTS PR00992 Alanine racemase signature 249 264 1.7E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 TIGRFAM TIGR00492 alr: alanine racemase 2 351 2.3E-100 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 Gene3D G3DSA:3.20.20.10 10 217 4.2E-139 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 SUPERFAMILY SSF51419 8 234 5.89E-58 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.2E-56 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 Pfam PF00842 Alanine racemase, C-terminal domain 233 353 7.4E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_21740 69273ba94c8f512c09a3b5b984d9254a 356 Gene3D G3DSA:2.40.37.10 8 350 4.2E-139 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_26050 1dff6cb1692a514e194383bda8836ecd 184 Gene3D G3DSA:3.10.450.50 51 180 3.1E-25 T 12-10-2018 ABD1_26050 1dff6cb1692a514e194383bda8836ecd 184 Pfam PF14534 Domain of unknown function (DUF4440) 55 163 1.7E-9 T 12-10-2018 IPR027843 Domain of unknown function DUF4440 ABD1_26050 1dff6cb1692a514e194383bda8836ecd 184 SUPERFAMILY SSF54427 43 179 7.88E-30 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_26050 1dff6cb1692a514e194383bda8836ecd 184 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 57 170 6.0E-15 T 12-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 SUPERFAMILY SSF50249 3 123 9.42E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.302 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-62 T 12-10-2018 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-68 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PIRSF PIRSF002133 1 124 8.9E-53 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.3E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_08120 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.8E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 467 6.6E-171 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 5.5E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 SUPERFAMILY SSF51905 4 370 2.52E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.6E-67 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 Gene3D G3DSA:3.30.390.30 348 467 7.5E-40 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 327 2.0E-67 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PIRSF PIRSF000350 1 463 1.6E-87 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.3E-38 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-38 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.3E-38 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.3E-38 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.3E-38 T 12-10-2018 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 Gene3D G3DSA:3.50.50.60 6 334 7.2E-116 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 SUPERFAMILY SSF55424 344 466 7.9E-37 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABD1_16950 2f6753c6b69f608bc0d1c17316a972ea 467 Gene3D G3DSA:3.50.50.60 156 277 7.2E-116 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08920 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 SUPERFAMILY SSF53448 40 324 7.03E-61 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_08920 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 Gene3D G3DSA:3.90.550.10 31 265 3.3E-42 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_08920 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 12 416 5.0E-182 T 12-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 ABD1_08920 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 Pfam PF13641 Glycosyltransferase like family 2 53 277 8.2E-38 T 12-10-2018 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 37 252 3.8E-65 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 Pfam PF13531 Bacterial extracellular solute-binding protein 32 253 4.1E-46 T 12-10-2018 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 Gene3D G3DSA:3.40.190.10 33 253 7.7E-80 T 12-10-2018 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 PIRSF PIRSF004846 3 257 2.8E-73 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 Gene3D G3DSA:3.40.190.10 110 219 7.7E-80 T 12-10-2018 ABD1_17430 054ca51ab60368a35df257b4e6fc1237 261 SUPERFAMILY SSF53850 30 253 2.17E-68 T 12-10-2018 ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 Gene3D G3DSA:3.40.50.880 1 205 1.3E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 5.3E-22 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 35.514 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 SUPERFAMILY SSF52317 2 203 1.81E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 PIRSF PIRSF000495 2 205 4.1E-72 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABD1_31150 41e19af67e87570b1db951604b25b5e5 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 3.1E-71 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABD1_14200 a83de565f5a47ef1f49adfa1cacf5199 197 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 1.7E-12 T 12-10-2018 IPR000182 GNAT domain ABD1_14200 a83de565f5a47ef1f49adfa1cacf5199 197 Gene3D G3DSA:3.40.630.30 1 194 3.1E-42 T 12-10-2018 ABD1_14200 a83de565f5a47ef1f49adfa1cacf5199 197 SUPERFAMILY SSF55729 5 179 2.05E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_26650 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 Gene3D G3DSA:3.30.70.260 8 95 2.8E-22 T 12-10-2018 ABD1_26650 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 SUPERFAMILY SSF117991 10 95 2.88E-20 T 12-10-2018 IPR027471 YbeD-like domain superfamily ABD1_26650 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 Pfam PF04359 Protein of unknown function (DUF493) 13 94 1.1E-23 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 SMART SM00062 47 271 2.7E-14 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 46 274 2.2E-20 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 48 344 1.1E-121 T 12-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 SUPERFAMILY SSF53850 44 268 3.39E-44 T 12-10-2018 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 Gene3D G3DSA:1.10.8.450 258 292 9.3E-54 T 12-10-2018 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 Gene3D G3DSA:3.40.190.10 49 257 9.3E-54 T 12-10-2018 ABD1_14420 c94d7653af8505636fae5aa2f81b6d2b 346 Gene3D G3DSA:3.40.190.10 125 222 9.3E-54 T 12-10-2018 ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 Pfam PF12833 Helix-turn-helix domain 238 317 4.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 SUPERFAMILY SSF46689 214 264 6.45E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 SMART SM00342 230 317 4.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 Pfam PF14525 AraC-binding-like domain 14 192 5.5E-22 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 Gene3D G3DSA:1.10.10.60 214 319 1.9E-28 T 12-10-2018 ABD1_17310 6aad8c11a66975e8d52f0ea5824eb829 321 SUPERFAMILY SSF46689 267 319 2.02E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 Pfam PF07969 Amidohydrolase family 51 534 2.0E-118 T 12-10-2018 IPR013108 Amidohydrolase 3 ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 Gene3D G3DSA:3.20.20.140 63 493 1.4E-92 T 12-10-2018 ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 SUPERFAMILY SSF51338 5 536 2.97E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 Gene3D G3DSA:2.30.40.10 10 509 1.4E-92 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 SUPERFAMILY SSF51556 62 494 4.09E-44 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_14510 7dd04f7b97dce9cc3e8339dd2a7c1139 624 Gene3D G3DSA:3.10.310.70 82 192 1.4E-92 T 12-10-2018 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 SUPERFAMILY SSF53474 13 275 1.88E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 PRINTS PR00412 Epoxide hydrolase signature 254 276 1.3E-11 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.3E-11 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 PRINTS PR00412 Epoxide hydrolase signature 54 69 1.3E-11 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 PRINTS PR00412 Epoxide hydrolase signature 221 237 1.3E-11 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 PRINTS PR00412 Epoxide hydrolase signature 34 52 1.3E-11 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 Pfam PF00561 alpha/beta hydrolase fold 28 265 9.6E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_00120 577fae32744f66e08739bf12731c5d6f 281 Gene3D G3DSA:3.40.50.1820 7 275 5.6E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 69.426 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 1.4E-51 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 Gene3D G3DSA:2.40.280.10 7 136 3.8E-46 T 12-10-2018 IPR023620 Small protein B ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 SUPERFAMILY SSF74982 9 139 1.44E-49 T 12-10-2018 IPR023620 Small protein B ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 6.0E-56 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site ABD1_07940 d9d7b0ca470ac81903ce251e101c5270 158 Pfam PF01668 SmpB protein 15 157 1.5E-56 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 Gene3D G3DSA:3.30.470.20 85 220 5.9E-95 T 12-10-2018 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.567 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 SUPERFAMILY SSF56104 2 232 4.9E-82 T 12-10-2018 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 234 9.5E-79 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 Pfam PF01259 SAICAR synthetase 7 231 5.3E-66 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABD1_33260 5a2e02811ffe603e24497a5cc4a83971 239 Gene3D G3DSA:3.30.200.20 7 231 5.9E-95 T 12-10-2018 ABD1_00170 ad8aaf1d8044e7f43403ce42f2386c3c 160 Gene3D G3DSA:3.10.50.40 11 160 3.0E-38 T 12-10-2018 ABD1_00170 ad8aaf1d8044e7f43403ce42f2386c3c 160 SUPERFAMILY SSF54534 13 149 4.91E-36 T 12-10-2018 ABD1_00170 ad8aaf1d8044e7f43403ce42f2386c3c 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 146 3.4E-18 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_02000 becea133a79d6842cc3014e9f7bb6c31 258 Gene3D G3DSA:3.40.225.10 25 256 3.4E-54 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABD1_02000 becea133a79d6842cc3014e9f7bb6c31 258 SMART SM01007 32 210 7.0E-46 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABD1_02000 becea133a79d6842cc3014e9f7bb6c31 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 210 9.4E-39 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABD1_02000 becea133a79d6842cc3014e9f7bb6c31 258 SUPERFAMILY SSF53639 25 237 2.94E-63 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABD1_01760 986fb41cfdd8f4b3aeb77e5e11cd437a 162 Pfam PF01464 Transglycosylase SLT domain 42 146 3.5E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 ABD1_01760 986fb41cfdd8f4b3aeb77e5e11cd437a 162 Gene3D G3DSA:1.10.530.10 26 159 7.3E-29 T 12-10-2018 ABD1_01760 986fb41cfdd8f4b3aeb77e5e11cd437a 162 SUPERFAMILY SSF53955 26 158 8.73E-33 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_03500 0095fde7f584df72e8ccf05fa4ee9132 203 Gene3D G3DSA:3.10.540.10 16 106 9.6E-32 T 12-10-2018 ABD1_03500 0095fde7f584df72e8ccf05fa4ee9132 203 Gene3D G3DSA:2.30.270.10 107 174 4.4E-14 T 12-10-2018 IPR023361 DUF1285, beta-roll domain superfamily ABD1_03500 0095fde7f584df72e8ccf05fa4ee9132 203 PIRSF PIRSF029557 11 200 4.3E-41 T 12-10-2018 IPR010707 Protein of unknown function DUF1285 ABD1_03500 0095fde7f584df72e8ccf05fa4ee9132 203 Pfam PF06938 Protein of unknown function (DUF1285) 56 196 1.7E-45 T 12-10-2018 IPR010707 Protein of unknown function DUF1285 ABD1_05950 ace2cc6d589133d12fad9491be198113 178 PIRSF PIRSF016183 3 177 2.2E-41 T 12-10-2018 IPR006839 Ribosome-associated, YjgA ABD1_05950 ace2cc6d589133d12fad9491be198113 178 Pfam PF04751 Protein of unknown function (DUF615) 19 151 3.5E-32 T 12-10-2018 IPR006839 Ribosome-associated, YjgA ABD1_05950 ace2cc6d589133d12fad9491be198113 178 Gene3D G3DSA:1.10.60.30 29 104 1.7E-19 T 12-10-2018 ABD1_05950 ace2cc6d589133d12fad9491be198113 178 SUPERFAMILY SSF158710 30 169 5.89E-35 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 4.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 4.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 SUPERFAMILY SSF51735 5 234 1.25E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 Gene3D G3DSA:3.40.50.720 2 230 7.3E-58 T 12-10-2018 ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.1E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05860 97952a47ae23f1e324a4c224acacc9a1 257 Pfam PF00106 short chain dehydrogenase 5 190 1.7E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 Gene3D G3DSA:1.10.357.10 1 204 1.9E-41 T 12-10-2018 ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 194 1.1E-28 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 SUPERFAMILY SSF46689 2 84 1.95E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 SUPERFAMILY SSF48498 83 195 9.12E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.7E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 200 83.89 T 12-10-2018 IPR017757 Transcriptional repressor BetI ABD1_08810 815b8b565ff5ba7cbf809202d9ad57af 207 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 194 6.3E-71 T 12-10-2018 IPR017757 Transcriptional repressor BetI ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 202 1.5E-30 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Gene3D G3DSA:1.10.1040.50 498 701 1.8E-57 T 12-10-2018 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 SUPERFAMILY SSF52096 1 295 6.77E-59 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 SUPERFAMILY SSF48179 618 708 1.36E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 SUPERFAMILY SSF51735 314 495 5.85E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Gene3D G3DSA:3.40.50.720 315 497 6.1E-65 T 12-10-2018 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 2.6E-59 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 SUPERFAMILY SSF48179 496 634 3.06E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Gene3D G3DSA:3.90.226.10 1 313 3.8E-97 T 12-10-2018 ABD1_27980 4a1fed0625e20ea3174222cf701c77dd 711 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 4.4E-16 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_07180 f9a1603006a39fff1111ec0640c2643c 97 SMART SM00357 7 68 2.3E-6 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 ABD1_07180 f9a1603006a39fff1111ec0640c2643c 97 PIRSF PIRSF002599 1 91 1.8E-13 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABD1_07180 f9a1603006a39fff1111ec0640c2643c 97 Pfam PF00313 'Cold-shock' DNA-binding domain 7 67 5.3E-12 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_07180 f9a1603006a39fff1111ec0640c2643c 97 Gene3D G3DSA:2.40.50.140 1 86 1.2E-16 T 12-10-2018 ABD1_07180 f9a1603006a39fff1111ec0640c2643c 97 SUPERFAMILY SSF50249 4 67 1.69E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 Gene3D G3DSA:3.40.190.10 179 279 1.7E-43 T 12-10-2018 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 9.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 Gene3D G3DSA:1.10.10.10 6 97 4.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 Pfam PF03466 LysR substrate binding domain 106 297 1.3E-17 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 7.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 7.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 7.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 SUPERFAMILY SSF53850 105 307 2.17E-29 T 12-10-2018 ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 SUPERFAMILY SSF46785 12 95 8.47E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18480 9c19a540722dc7772a7414492d7bfe8a 311 Gene3D G3DSA:3.40.190.10 98 296 1.7E-43 T 12-10-2018 ABD1_00870 273ccd2ccc903a6884307d283fca3926 233 Gene3D G3DSA:3.40.50.720 2 228 4.7E-28 T 12-10-2018 ABD1_00870 273ccd2ccc903a6884307d283fca3926 233 Pfam PF00106 short chain dehydrogenase 4 185 5.1E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00870 273ccd2ccc903a6884307d283fca3926 233 SUPERFAMILY SSF51735 4 221 3.73E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_21060 350502d0b3883ecdb40b526ab49f4347 240 Gene3D G3DSA:3.40.50.880 3 235 5.0E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_21060 350502d0b3883ecdb40b526ab49f4347 240 SUPERFAMILY SSF52317 46 236 1.14E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_21060 350502d0b3883ecdb40b526ab49f4347 240 Pfam PF00117 Glutamine amidotransferase class-I 25 190 5.4E-20 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 Gene3D G3DSA:3.40.50.1440 11 225 1.5E-77 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 SMART SM00864 19 210 6.9E-110 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 132 153 5.7E-44 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 104 124 5.7E-44 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 217 238 5.7E-44 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 194 216 5.7E-44 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 SMART SM00865 212 331 3.6E-46 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 Gene3D G3DSA:3.30.1330.20 226 340 4.5E-33 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 345 8.8E-125 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 21 179 7.3E-43 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 352 35.882 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 SUPERFAMILY SSF52490 18 213 1.96E-67 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 SUPERFAMILY SSF55307 210 325 3.66E-37 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ABD1_32270 bdbe5e7435418828c31bc0b14fadaac4 391 Pfam PF12327 FtsZ family, C-terminal domain 227 322 4.6E-31 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 37 66 1.4E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.4E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 7 36 1.4E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 Pfam PF01245 Ribosomal protein L19 7 116 1.6E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 SUPERFAMILY SSF50104 5 118 1.91E-47 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.3E-50 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 31.074 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 Gene3D G3DSA:2.30.30.790 9 121 9.4E-16 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 PIRSF PIRSF002191 1 122 2.0E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_30460 986d320309f702c97dcfac8d904c3e9d 122 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_20470 b670a5808111d176001f235a13474c15 167 SMART SM00226 5 160 1.3E-41 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABD1_20470 b670a5808111d176001f235a13474c15 167 Gene3D G3DSA:3.40.50.2300 5 166 4.1E-51 T 12-10-2018 ABD1_20470 b670a5808111d176001f235a13474c15 167 SUPERFAMILY SSF52788 3 161 2.62E-47 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABD1_20470 b670a5808111d176001f235a13474c15 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 157 6.0E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABD1_20470 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 132 147 2.5E-16 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_20470 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 126 2.5E-16 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_20470 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 2.5E-16 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_32680 b70e82571e1425937b3ac63a8c07dc60 171 Pfam PF02600 Disulfide bond formation protein DsbB 6 157 1.5E-40 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ABD1_32680 b70e82571e1425937b3ac63a8c07dc60 171 SUPERFAMILY SSF158442 11 159 4.58E-41 T 12-10-2018 IPR023380 DsbB-like superfamily ABD1_32680 b70e82571e1425937b3ac63a8c07dc60 171 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 165 22.708 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB ABD1_32680 b70e82571e1425937b3ac63a8c07dc60 171 Gene3D G3DSA:1.20.1550.10 3 170 1.3E-48 T 12-10-2018 IPR023380 DsbB-like superfamily ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.066 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 SUPERFAMILY SSF111337 1 340 7.32E-128 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 Gene3D G3DSA:2.40.10.240 63 159 3.9E-115 T 12-10-2018 ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 Pfam PF02547 Queuosine biosynthesis protein 3 340 5.9E-126 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 Gene3D G3DSA:3.40.1780.10 14 340 3.9E-115 T 12-10-2018 ABD1_28510 94a0f938fc3f4f30a1afc2feac12b272 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 5.6E-136 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 SUPERFAMILY SSF63882 9 181 5.23E-39 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Pfam PF00994 Probable molybdopterin binding domain 185 323 1.7E-25 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Gene3D G3DSA:3.90.105.10 33 179 8.9E-100 T 12-10-2018 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 SUPERFAMILY SSF63867 337 406 4.84E-11 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Pfam PF03454 MoeA C-terminal region (domain IV) 341 404 1.3E-10 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 SUPERFAMILY SSF53218 182 332 6.94E-33 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 SMART SM00852 185 328 6.8E-27 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Gene3D G3DSA:2.40.340.10 337 401 8.9E-100 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 321 6.0E-26 T 12-10-2018 IPR001453 MoaB/Mog domain ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 172 1.4E-27 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Gene3D G3DSA:2.170.190.11 53 146 8.9E-100 T 12-10-2018 ABD1_20220 0a4632a2d090c309983fadabdf6216af 411 Gene3D G3DSA:3.40.980.10 180 336 8.9E-100 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.40.190.10 103 274 3.1E-60 T 12-10-2018 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF53850 101 285 1.9E-61 T 12-10-2018 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.30.70.260 279 368 3.7E-28 T 12-10-2018 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 1.9E-26 T 12-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Pfam PF01842 ACT domain 287 351 1.9E-12 T 12-10-2018 IPR002912 ACT domain ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 PIRSF PIRSF001500 7 369 1.1E-135 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF48600 10 97 4.43E-20 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF55021 271 366 1.55E-26 T 12-10-2018 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:1.20.59.10 14 100 1.9E-30 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.40.190.10 181 265 3.1E-60 T 12-10-2018 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 SMART SM00830 18 99 2.7E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Pfam PF00800 Prephenate dehydratase 101 278 5.8E-63 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABD1_22750 f1b7b0c94df465334d87c4412d411209 369 Pfam PF01817 Chorismate mutase type II 18 96 4.7E-22 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABD1_33300 6081357c38e30bef38029c867c76b6ff 390 Gene3D G3DSA:2.120.10.30 41 388 2.9E-107 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABD1_33300 6081357c38e30bef38029c867c76b6ff 390 SUPERFAMILY SSF50952 52 377 3.79E-47 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ABD1_33300 6081357c38e30bef38029c867c76b6ff 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 383 3.9E-125 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 4.4E-40 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PIRSF PIRSF001529 1 423 3.6E-185 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.415 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 8.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 8.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 8.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 8.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 8.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.4E-30 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 3.7E-175 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 SUPERFAMILY SSF46589 1 112 1.2E-30 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 SUPERFAMILY SSF55681 116 417 1.09E-103 T 12-10-2018 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 Gene3D G3DSA:3.30.930.10 105 423 5.4E-120 T 12-10-2018 ABD1_26740 2d0b999fda90696a29529ec06934b66c 423 Gene3D G3DSA:1.10.287.40 1 104 7.7E-24 T 12-10-2018 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 SUPERFAMILY SSF52540 293 518 1.33E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 Pfam PF00005 ABC transporter 18 177 1.9E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 Pfam PF00005 ABC transporter 329 459 7.4E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 Gene3D G3DSA:3.40.50.300 1 258 7.6E-55 T 12-10-2018 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 Gene3D G3DSA:3.40.50.300 274 540 9.3E-55 T 12-10-2018 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 SUPERFAMILY SSF52540 2 253 9.11E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 SMART SM00382 336 503 9.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 SMART SM00382 26 222 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_00070 5d6e8b1b97ce63220a1517c65146eaab 641 Pfam PF12848 ABC transporter 216 294 1.7E-29 T 12-10-2018 IPR032781 ABC-transporter extension domain ABD1_07780 c79d07b7d1a231461eaa677b21d8fd04 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 8.9E-29 T 12-10-2018 ABD1_07780 c79d07b7d1a231461eaa677b21d8fd04 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 5.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_07780 c79d07b7d1a231461eaa677b21d8fd04 224 Gene3D G3DSA:3.40.50.1000 6 204 5.6E-60 T 12-10-2018 IPR023214 HAD superfamily ABD1_07780 c79d07b7d1a231461eaa677b21d8fd04 224 SUPERFAMILY SSF56784 1 216 2.8E-54 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_07780 c79d07b7d1a231461eaa677b21d8fd04 224 Gene3D G3DSA:1.10.150.240 17 84 5.6E-60 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 4.2E-18 T 12-10-2018 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Gene3D G3DSA:1.10.10.10 1 55 2.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SUPERFAMILY SSF54909 66 151 6.97E-18 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SMART SM00344 4 113 3.1E-43 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.5E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.5E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.5E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Gene3D G3DSA:3.30.70.920 56 149 1.5E-20 T 12-10-2018 ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SUPERFAMILY SSF46785 4 61 7.32E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00960 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 2.7E-19 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 5.7E-209 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.30.450.90 85 217 5.5E-52 T 12-10-2018 ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 SUPERFAMILY SSF52540 102 490 1.7E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.40.50.300 218 496 3.8E-115 T 12-10-2018 ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 Pfam PF00437 Type II/IV secretion system protein 119 384 4.1E-88 T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 SUPERFAMILY SSF160246 8 70 3.66E-15 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 SMART SM00382 245 368 2.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_06220 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.30.300.160 3 84 4.3E-7 T 12-10-2018 ABD1_13500 87cf7dc1b98a970d710164b688cf5ba4 257 Gene3D G3DSA:1.10.12.10 200 257 1.5E-21 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_13500 87cf7dc1b98a970d710164b688cf5ba4 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABD1_13500 87cf7dc1b98a970d710164b688cf5ba4 257 Gene3D G3DSA:3.90.226.10 4 199 3.1E-67 T 12-10-2018 ABD1_13500 87cf7dc1b98a970d710164b688cf5ba4 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.4E-69 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_13500 87cf7dc1b98a970d710164b688cf5ba4 257 SUPERFAMILY SSF52096 5 256 4.29E-81 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_05390 de8ce67b8d043e627f025fd315ee1b1c 305 PIRSF PIRSF028188 1 304 3.0E-101 T 12-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type ABD1_05390 de8ce67b8d043e627f025fd315ee1b1c 305 Gene3D G3DSA:3.75.10.10 5 296 1.5E-37 T 12-10-2018 ABD1_05390 de8ce67b8d043e627f025fd315ee1b1c 305 SUPERFAMILY SSF55909 4 299 1.18E-32 T 12-10-2018 ABD1_05390 de8ce67b8d043e627f025fd315ee1b1c 305 Pfam PF02274 Amidinotransferase 9 301 5.0E-70 T 12-10-2018 ABD1_01360 44203077df82ca095eb68c36fbe63194 175 Gene3D G3DSA:1.10.10.10 20 129 1.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_01360 44203077df82ca095eb68c36fbe63194 175 Pfam PF03551 Transcriptional regulator PadR-like family 38 105 1.5E-16 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABD1_01360 44203077df82ca095eb68c36fbe63194 175 SUPERFAMILY SSF46785 20 120 1.59E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 SUPERFAMILY SSF116878 121 451 2.22E-49 T 12-10-2018 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Gene3D G3DSA:3.40.50.300 217 379 2.2E-101 T 12-10-2018 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Pfam PF01926 50S ribosome-binding GTPase 218 311 1.4E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 370 1.5E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 2.5E-36 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 4.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 4.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 SUPERFAMILY SSF52540 72 370 7.43E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Gene3D G3DSA:3.30.1360.120 1 121 2.1E-40 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Pfam PF12631 MnmE helical domain 123 448 1.5E-55 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 451 32.325 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 451 4.8E-104 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABD1_33950 c61fd1a61a157df2f988452a90aab98b 451 Gene3D G3DSA:1.20.120.430 122 451 2.2E-101 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 Pfam PF00474 Sodium:solute symporter family 35 437 2.5E-132 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.8E-123 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 492 6.1E-219 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site ABD1_15380 3b0c17de3af44aa3c216d3ef86cf5f6b 496 Gene3D G3DSA:1.20.1730.10 24 495 5.7E-94 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily ABD1_03440 e7c654e96457cdd0c4c6aad3db30cc3b 112 Pfam PF01588 Putative tRNA binding domain 14 110 1.3E-13 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABD1_03440 e7c654e96457cdd0c4c6aad3db30cc3b 112 Gene3D G3DSA:2.40.50.140 1 112 8.5E-32 T 12-10-2018 ABD1_03440 e7c654e96457cdd0c4c6aad3db30cc3b 112 SUPERFAMILY SSF50249 4 111 7.43E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_03440 e7c654e96457cdd0c4c6aad3db30cc3b 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 9.1E-49 T 12-10-2018 IPR008231 Probable chaperone CsaA ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF01330 RuvA N terminal domain 1 61 3.7E-20 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF50249 1 62 1.09E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:1.10.150.20 66 138 3.5E-26 T 12-10-2018 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF46929 152 198 3.66E-9 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:1.10.8.10 151 198 6.2E-14 T 12-10-2018 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF47781 65 135 6.39E-22 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:2.40.50.140 1 65 1.2E-23 T 12-10-2018 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 198 29.911 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 SMART SM00278 72 91 0.52 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 SMART SM00278 107 126 0.13 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.1E-18 T 12-10-2018 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF07499 RuvA, C-terminal domain 155 198 1.8E-13 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ABD1_25390 a9b46ba6b7e7f19740371219a046bfe0 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 2.5E-56 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 Gene3D G3DSA:3.40.50.720 2 245 1.6E-54 T 12-10-2018 ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 SUPERFAMILY SSF51735 3 234 4.33E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 Pfam PF00106 short chain dehydrogenase 3 194 2.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.8E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.8E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.8E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.8E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18910 8a0e096ea6d05cdebc85fdc7103023da 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.8E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 54 67 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 SUPERFAMILY SSF51366 3 225 7.85E-73 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 SMART SM00934 2 222 9.2E-97 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 4 222 7.1E-63 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 227 36.835 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 221 1.9E-49 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABD1_15840 4f76b6a3493c469a25992a04af83c605 227 Gene3D G3DSA:3.20.20.70 2 227 3.8E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_06260 756d41f8b3a65451d586237ae9f0101d 274 SUPERFAMILY SSF56317 3 269 4.97E-68 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_06260 756d41f8b3a65451d586237ae9f0101d 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 3.1E-48 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABD1_06260 756d41f8b3a65451d586237ae9f0101d 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site ABD1_06260 756d41f8b3a65451d586237ae9f0101d 274 Gene3D G3DSA:3.60.110.10 1 274 3.8E-82 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 5.2E-5 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 5.2E-5 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 5.2E-5 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 4.1E-80 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 4.9E-6 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 4.9E-6 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 4.9E-6 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.30.300.10 403 522 2.7E-49 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.40.50.880 11 203 1.2E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF00958 GMP synthase C terminal domain 430 521 1.9E-40 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF02540 NAD synthase 217 288 2.2E-8 T 12-10-2018 IPR022310 NAD/GMP synthase ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 522 6.2E-147 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF00117 Glutamine amidotransferase class-I 14 197 4.8E-41 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.79 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF52317 8 234 1.13E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF54810 402 522 4.45E-48 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF52402 194 417 2.03E-60 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 2.8E-7 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 2.8E-7 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 2.8E-7 T 12-10-2018 ABD1_01340 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.40.50.620 206 402 1.3E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 Gene3D G3DSA:3.50.50.60 158 251 2.5E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 198 3.6E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.6E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 SUPERFAMILY SSF51905 1 301 2.09E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 Gene3D G3DSA:3.50.50.60 300 477 3.3E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 Pfam PF00743 Flavin-binding monooxygenase-like 78 348 4.1E-16 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 62 9.4E-8 T 12-10-2018 ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 Gene3D G3DSA:3.50.50.60 1 157 1.2E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_29390 8203bb95ebfa84db8a66f9f230d191fe 496 SUPERFAMILY SSF51905 281 415 8.55E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26500 2528263b618075188afc9ad439d26ead 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 8.4E-160 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26500 2528263b618075188afc9ad439d26ead 388 PIRSF PIRSF001554 1 388 8.5E-149 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.30.470.20 1 235 1.4E-88 T 12-10-2018 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.30.1490.20 21 105 1.4E-88 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_26500 2528263b618075188afc9ad439d26ead 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26500 2528263b618075188afc9ad439d26ead 388 SUPERFAMILY SSF52210 240 386 7.72E-53 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Pfam PF08442 ATP-grasp domain 2 203 6.7E-78 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26500 2528263b618075188afc9ad439d26ead 388 SUPERFAMILY SSF56059 1 239 2.75E-79 T 12-10-2018 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Pfam PF00549 CoA-ligase 263 383 8.3E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.40.50.261 241 388 8.3E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26500 2528263b618075188afc9ad439d26ead 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.916 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_30900 af384336382ffb4efd0d5a67ace7e453 321 SUPERFAMILY SSF53850 10 317 4.23E-88 T 12-10-2018 ABD1_30900 af384336382ffb4efd0d5a67ace7e453 321 Pfam PF13531 Bacterial extracellular solute-binding protein 30 270 7.5E-44 T 12-10-2018 ABD1_30900 af384336382ffb4efd0d5a67ace7e453 321 Gene3D G3DSA:3.40.190.10 104 315 9.7E-135 T 12-10-2018 ABD1_30900 af384336382ffb4efd0d5a67ace7e453 321 Gene3D G3DSA:3.40.190.10 17 285 9.7E-135 T 12-10-2018 ABD1_30900 af384336382ffb4efd0d5a67ace7e453 321 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 6 316 4.2E-143 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.43.10 1 98 7.1E-27 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:1.10.45.10 427 466 1.4E-14 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 SUPERFAMILY SSF56176 4 222 1.73E-67 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.465.10 100 220 2.2E-39 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 1.2E-61 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.70.2190 222 338 1.6E-25 T 12-10-2018 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 SUPERFAMILY SSF55103 226 468 4.25E-61 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.70.2740 341 426 4.2E-27 T 12-10-2018 ABD1_30370 b2891c90dae7e017d72a0119ec718c96 469 Pfam PF01565 FAD binding domain 46 184 7.6E-40 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Gene3D G3DSA:3.20.19.10 678 917 2.8E-110 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Gene3D G3DSA:1.10.1440.20 616 675 3.0E-19 T 12-10-2018 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 ProSitePatterns PS00450 Aconitase family signature 1. 452 468 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 149 162 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 173 181 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 518 531 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 456 467 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 296 309 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 206 219 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 220 235 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 282 295 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 PRINTS PR00415 Aconitase family signature 375 389 1.2E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 SUPERFAMILY SSF53732 7 651 4.58E-226 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Gene3D G3DSA:3.30.499.10 376 615 3.9E-98 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Pfam PF00694 Aconitase C-terminal domain 716 842 1.4E-50 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 ProSitePatterns PS01244 Aconitase family signature 2. 518 531 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 SUPERFAMILY SSF52016 655 915 1.35E-89 T 12-10-2018 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Gene3D G3DSA:3.30.499.20 8 375 1.3E-160 T 12-10-2018 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 916 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 ABD1_05220 c299bea24c9c5309e0ec105fad1e2edf 918 Pfam PF00330 Aconitase family (aconitate hydratase) 76 587 8.0E-181 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 Gene3D G3DSA:1.10.10.2830 118 231 1.4E-36 T 12-10-2018 ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 SMART SM00470 39 131 1.1E-30 T 12-10-2018 IPR003115 ParB/Sulfiredoxin ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 Pfam PF02195 ParB-like nuclease domain 40 131 3.1E-26 T 12-10-2018 IPR003115 ParB/Sulfiredoxin ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 SUPERFAMILY SSF109709 124 232 2.88E-35 T 12-10-2018 ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 Gene3D G3DSA:3.90.1530.30 52 117 1.3E-27 T 12-10-2018 ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 SUPERFAMILY SSF110849 39 133 3.4E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ABD1_15610 dd932e6b156fe8fc20507cd3eb9384ed 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 215 3.6E-57 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 SUPERFAMILY SSF47336 216 284 6.41E-9 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 Pfam PF00857 Isochorismatase family 32 205 3.6E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 169 187 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 2 14 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 113 135 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 63 80 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 187 204 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PRINTS PR01398 Isochorismatase signature 80 99 6.5E-45 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 SUPERFAMILY SSF52499 1 225 1.7E-60 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 Pfam PF00550 Phosphopantetheine attachment site 220 276 2.1E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 Gene3D G3DSA:3.40.50.850 1 209 7.1E-74 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 Gene3D G3DSA:1.10.1200.10 215 285 1.1E-18 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_23750 c267f030611470fcb1d825fcfad0c0b1 289 PIRSF PIRSF001111 1 288 8.9E-132 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 ABD1_21750 96cb2d2c05eccb92169defb3625e4a24 215 SUPERFAMILY SSF56235 2 209 3.72E-25 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_21750 96cb2d2c05eccb92169defb3625e4a24 215 Gene3D G3DSA:3.60.20.10 2 188 2.0E-19 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_21750 96cb2d2c05eccb92169defb3625e4a24 215 PIRSF PIRSF009120 1 214 5.1E-86 T 12-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 ABD1_21750 96cb2d2c05eccb92169defb3625e4a24 215 Pfam PF00227 Proteasome subunit 53 144 4.4E-6 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 ABD1_23130 c26a582138fa530aa5bbef2a007e085e 257 Pfam PF01061 ABC-2 type transporter 10 219 1.1E-35 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ABD1_23130 c26a582138fa530aa5bbef2a007e085e 257 PIRSF PIRSF006648 2 254 1.3E-20 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ABD1_23130 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 4.9E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ABD1_23130 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 4.9E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ABD1_23130 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 4.9E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ABD1_p00010 8912392ba97a36acfa90573c67add93e 307 Pfam PF01051 Initiator Replication protein 4 226 6.1E-50 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 ABD1_p00010 8912392ba97a36acfa90573c67add93e 307 Gene3D G3DSA:1.10.10.10 1 137 2.1E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_p00010 8912392ba97a36acfa90573c67add93e 307 SUPERFAMILY SSF46785 5 128 9.07E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_p00010 8912392ba97a36acfa90573c67add93e 307 Gene3D G3DSA:1.10.10.10 141 235 8.0E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_p00010 8912392ba97a36acfa90573c67add93e 307 SUPERFAMILY SSF46785 129 230 5.44E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_26840 368220d4078d7770fba547be57628055 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 463 9.9E-109 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ABD1_26840 368220d4078d7770fba547be57628055 484 Gene3D G3DSA:1.20.1600.10 56 463 4.0E-133 T 12-10-2018 ABD1_26840 368220d4078d7770fba547be57628055 484 Pfam PF02321 Outer membrane efflux protein 66 252 3.7E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_26840 368220d4078d7770fba547be57628055 484 Pfam PF02321 Outer membrane efflux protein 281 461 3.3E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_26840 368220d4078d7770fba547be57628055 484 SUPERFAMILY SSF56954 10 464 2.62E-108 T 12-10-2018 ABD1_26840 368220d4078d7770fba547be57628055 484 Gene3D G3DSA:2.20.200.10 103 352 4.0E-133 T 12-10-2018 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 Pfam PF02261 Aspartate decarboxylase 1 114 8.7E-46 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 3.3E-46 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 Gene3D G3DSA:2.40.40.20 1 126 1.7E-51 T 12-10-2018 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 SUPERFAMILY SSF50692 1 122 6.21E-46 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-64 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.068 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABD1_07820 5c805f4ffd3dc62057d0e013a396cb30 126 PIRSF PIRSF006246 1 124 1.0E-46 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABD1_24340 f9bcf54a67d8662f5be28eb7716d8022 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 2.1E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_24340 f9bcf54a67d8662f5be28eb7716d8022 459 SUPERFAMILY SSF161098 204 446 8.11E-34 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_24340 f9bcf54a67d8662f5be28eb7716d8022 459 Gene3D G3DSA:1.10.3720.10 224 457 1.3E-36 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_24340 f9bcf54a67d8662f5be28eb7716d8022 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 165 454 1.7E-86 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ABD1_24340 f9bcf54a67d8662f5be28eb7716d8022 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 3.1E-34 T 12-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SUPERFAMILY SSF55874 349 518 3.93E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SUPERFAMILY SSF47384 278 360 4.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SMART SM00388 295 360 2.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 360 2.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 Pfam PF00672 HAMP domain 246 291 3.5E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SMART SM00304 242 294 5.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SMART SM00387 404 516 7.4E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 Gene3D G3DSA:3.30.565.10 367 516 7.1E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 SUPERFAMILY SSF158472 246 293 1.83E-7 T 12-10-2018 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 514 3.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_07010 1ae926728516abf5495ea7de11ce5f01 530 Gene3D G3DSA:1.10.287.130 246 361 1.6E-25 T 12-10-2018 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 237 3.2E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 Gene3D G3DSA:1.10.10.10 136 239 6.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17710 7e873989a2e762c8870539fb953a374d 247 SMART SM00448 13 123 5.9E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 SMART SM00862 161 237 1.4E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 SUPERFAMILY SSF52172 8 137 2.28E-41 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_17710 7e873989a2e762c8870539fb953a374d 247 SUPERFAMILY SSF46894 138 238 2.49E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 Pfam PF00072 Response regulator receiver domain 15 123 2.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_17710 7e873989a2e762c8870539fb953a374d 247 Gene3D G3DSA:3.40.50.2300 9 135 5.0E-37 T 12-10-2018 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 PIRSF PIRSF002134 1 118 1.4E-40 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.9E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.02 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-26 T 12-10-2018 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 SUPERFAMILY SSF46946 2 114 6.15E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.5E-14 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29440 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_05230 ddc60dad9a69f37ca0d6ea92d0bb8788 253 Pfam PF00899 ThiF family 22 248 6.5E-37 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABD1_05230 ddc60dad9a69f37ca0d6ea92d0bb8788 253 SUPERFAMILY SSF69572 8 248 1.83E-59 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABD1_05230 ddc60dad9a69f37ca0d6ea92d0bb8788 253 Gene3D G3DSA:3.40.50.720 2 253 6.5E-90 T 12-10-2018 ABD1_26850 056d577c748eab4ce66b363b98d53eaa 116 SUPERFAMILY SSF117782 1 105 4.97E-37 T 12-10-2018 IPR035439 UPF0145 domain superfamily ABD1_26850 056d577c748eab4ce66b363b98d53eaa 116 Pfam PF01906 Putative heavy-metal-binding 1 103 3.9E-38 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 ABD1_26850 056d577c748eab4ce66b363b98d53eaa 116 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.095 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 ABD1_26850 056d577c748eab4ce66b363b98d53eaa 116 Gene3D G3DSA:3.30.110.70 2 109 4.1E-32 T 12-10-2018 ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 396 1.2E-12 T 12-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 38 397 3.2E-104 T 12-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 Pfam PF01522 Polysaccharide deacetylase 92 254 1.1E-22 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 Gene3D G3DSA:3.20.20.80 301 420 7.4E-22 T 12-10-2018 ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 SUPERFAMILY SSF88713 56 257 5.28E-31 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_21600 dc899f46464777cff7b7b371c60a13f4 609 Gene3D G3DSA:3.20.20.370 26 291 1.7E-60 T 12-10-2018 ABD1_25550 cc50eeefed803c6b894c7b184d3887a3 617 SUPERFAMILY SSF51126 7 458 1.79E-20 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor ABD1_25550 cc50eeefed803c6b894c7b184d3887a3 617 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 615 6.1E-292 T 12-10-2018 IPR026454 Rhombotarget A ABD1_25550 cc50eeefed803c6b894c7b184d3887a3 617 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 24 47 9.7E-8 T 12-10-2018 IPR026457 CSLREA domain ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 401 2.0E-140 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 Gene3D G3DSA:3.40.47.10 143 400 2.4E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 SUPERFAMILY SSF53901 5 278 2.81E-83 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 Gene3D G3DSA:3.40.47.10 8 284 2.4E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 403 2.5E-227 T 12-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 Pfam PF02803 Thiolase, C-terminal domain 278 402 1.4E-46 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 PIRSF PIRSF000429 1 403 8.2E-134 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 Pfam PF00108 Thiolase, N-terminal domain 7 270 1.8E-80 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_19110 7ba0e0753b96889eededb19d62aa30e0 403 SUPERFAMILY SSF53901 279 402 2.78E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_15940 1c7496098478fe1b864b69f3474ee8a5 866 Pfam PF00593 TonB dependent receptor 365 865 1.2E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_15940 1c7496098478fe1b864b69f3474ee8a5 866 SUPERFAMILY SSF56935 22 866 7.63E-103 T 12-10-2018 ABD1_15940 1c7496098478fe1b864b69f3474ee8a5 866 Gene3D G3DSA:2.170.130.10 15 152 5.5E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_15940 1c7496098478fe1b864b69f3474ee8a5 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 147 1.0E-21 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_17670 bc725b039462d3f97bc7f096291c8d7b 66 Gene3D G3DSA:2.60.40.1090 5 66 1.3E-12 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 ABD1_17670 bc725b039462d3f97bc7f096291c8d7b 66 Pfam PF00419 Fimbrial protein 6 65 9.6E-8 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 ABD1_17670 bc725b039462d3f97bc7f096291c8d7b 66 SUPERFAMILY SSF49401 11 66 4.42E-10 T 12-10-2018 IPR008966 Adhesion domain superfamily ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Gene3D G3DSA:3.90.980.10 163 284 1.9E-37 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 SMART SM00493 302 372 2.1E-15 T 12-10-2018 IPR006171 TOPRIM domain ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Pfam PF10410 DnaB-helicase binding domain of primase 411 465 2.5E-5 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Gene3D G3DSA:3.40.1360.10 285 408 2.3E-37 T 12-10-2018 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Pfam PF01807 CHC2 zinc finger 4 98 1.8E-38 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Pfam PF08275 DNA primase catalytic core, N-terminal domain 174 294 2.1E-37 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 SMART SM00400 34 88 4.7E-30 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Hamap MF_00974 DNA primase [dnaG]. 2 613 26.419 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Gene3D G3DSA:3.90.580.10 1 101 4.0E-37 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 SUPERFAMILY SSF57783 1 97 7.14E-34 T 12-10-2018 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 SUPERFAMILY SSF56731 164 463 1.44E-93 T 12-10-2018 ABD1_07890 e2f353ebcfb8098e9844c63b2f3a39f7 621 Pfam PF13662 Toprim domain 306 369 1.2E-15 T 12-10-2018 IPR006171 TOPRIM domain ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.451 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 Gene3D G3DSA:3.40.309.10 229 378 2.0E-165 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 SUPERFAMILY SSF53720 8 420 1.03E-119 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 8.6E-153 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 Gene3D G3DSA:3.40.605.10 15 417 2.0E-165 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 Pfam PF00171 Aldehyde dehydrogenase family 9 289 2.6E-16 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 2.5E-6 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_04610 70bcac9cbd23d85911840b4e1de6d9fe 421 PIRSF PIRSF000151 1 421 4.0E-181 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Gene3D G3DSA:3.30.980.40 497 602 3.0E-32 T 12-10-2018 ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Gene3D G3DSA:3.40.50.300 603 906 6.4E-113 T 12-10-2018 ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 SMART SM00843 924 986 8.4E-33 T 12-10-2018 IPR018541 FtsK gamma domain ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 SUPERFAMILY SSF52540 580 893 1.27E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Pfam PF09397 Ftsk gamma domain 926 986 1.3E-26 T 12-10-2018 IPR018541 FtsK gamma domain ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 SUPERFAMILY SSF46785 924 986 2.5E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 2 148 5.8E-28 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Gene3D G3DSA:1.10.10.10 918 985 4.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_08220 d09fd95bdfb2ff21b160b2a5184df4b8 986 Pfam PF01580 FtsK/SpoIIIE family 606 820 1.4E-63 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 16 822 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 Pfam PF01553 Acyltransferase 299 440 1.6E-20 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 PIRSF PIRSF500064 9 838 3.1E-236 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 22 831 23.806 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 SMART SM00563 316 443 9.8E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 PIRSF PIRSF000437 30 840 2.7E-231 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 ABD1_29770 f0b5966f8e166b7203d5ba8b92788df6 856 SUPERFAMILY SSF69593 257 499 2.22E-25 T 12-10-2018 ABD1_14340 455d350fc2ef1d56ab0f69ef2486e48a 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 209 3.7E-43 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_14340 455d350fc2ef1d56ab0f69ef2486e48a 334 PIRSF PIRSF000267 1 334 9.3E-90 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_14340 455d350fc2ef1d56ab0f69ef2486e48a 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 6.4E-96 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_22200 37acde206baa024f79522bd82a7bc51c 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 410 7.8E-151 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABD1_22200 37acde206baa024f79522bd82a7bc51c 411 Pfam PF03616 Sodium/glutamate symporter 5 379 2.4E-138 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABD1_22200 37acde206baa024f79522bd82a7bc51c 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 410 24.896 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 SUPERFAMILY SSF81464 14 115 3.43E-22 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 PIRSF PIRSF000292 1 349 8.6E-128 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 Gene3D G3DSA:1.10.287.90 26 110 2.0E-30 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 236 7.4E-101 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 222 1.0E-5 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 Gene3D G3DSA:2.60.40.420 111 279 6.1E-48 T 12-10-2018 IPR008972 Cupredoxin ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 Pfam PF06481 COX Aromatic Rich Motif 297 323 5.7E-9 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 ABD1_21650 8085e71fe3c3b01d131c97ee183addd7 350 SUPERFAMILY SSF49503 117 254 4.06E-44 T 12-10-2018 IPR008972 Cupredoxin ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 SUPERFAMILY SSF56935 31 718 6.87E-123 T 12-10-2018 ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 Gene3D G3DSA:2.40.170.20 180 718 2.9E-120 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 Pfam PF00593 TonB dependent receptor 246 717 2.4E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 Gene3D G3DSA:2.170.130.10 53 179 1.8E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 168 1.2E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_32190 45026c43df3714548e260f5f2309dcb3 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 716 6.4E-98 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_31030 ff92bb8ff43b3ae156b2964c781eae83 126 SMART SM00671 74 110 2.1E-6 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_31030 ff92bb8ff43b3ae156b2964c781eae83 126 SUPERFAMILY SSF81901 57 117 3.01E-13 T 12-10-2018 ABD1_31030 ff92bb8ff43b3ae156b2964c781eae83 126 Pfam PF08238 Sel1 repeat 53 73 7.1 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_31030 ff92bb8ff43b3ae156b2964c781eae83 126 Pfam PF08238 Sel1 repeat 74 110 1.3E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_31030 ff92bb8ff43b3ae156b2964c781eae83 126 Gene3D G3DSA:1.25.40.10 21 125 6.1E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 Gene3D G3DSA:1.10.10.10 2 67 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 SUPERFAMILY SSF48008 72 205 1.07E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 2.4E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 SUPERFAMILY SSF46785 4 70 1.84E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 SMART SM00895 76 197 1.6E-15 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 Gene3D G3DSA:1.20.120.530 70 212 5.3E-31 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 SMART SM00345 8 66 6.0E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_13340 9a0eff7c7e3c32b169f45d4d6e6b1655 214 Pfam PF07729 FCD domain 76 196 6.5E-26 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_21450 cbd5b13531d5c3781e19c19fc1f92b03 192 SMART SM00903 16 158 1.3E-15 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_21450 cbd5b13531d5c3781e19c19fc1f92b03 192 Pfam PF01613 Flavin reductase like domain 21 160 9.1E-18 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_21450 cbd5b13531d5c3781e19c19fc1f92b03 192 Gene3D G3DSA:2.30.110.10 1 191 4.5E-50 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_21450 cbd5b13531d5c3781e19c19fc1f92b03 192 SUPERFAMILY SSF50475 6 188 6.87E-39 T 12-10-2018 ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 SUPERFAMILY SSF53850 92 299 7.12E-32 T 12-10-2018 ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:1.10.10.10 3 88 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 SUPERFAMILY SSF46785 5 115 3.01E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:3.40.190.10 96 290 5.4E-52 T 12-10-2018 ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 Pfam PF03466 LysR substrate binding domain 91 294 7.8E-41 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_09450 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:3.40.190.10 165 268 5.4E-52 T 12-10-2018 ABD1_21940 078f51ca5439a6cd69b4b82e54b31a63 369 Gene3D G3DSA:1.20.1250.20 1 365 7.1E-26 T 12-10-2018 ABD1_21940 078f51ca5439a6cd69b4b82e54b31a63 369 SUPERFAMILY SSF103473 4 367 2.22E-31 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_21940 078f51ca5439a6cd69b4b82e54b31a63 369 Pfam PF07690 Major Facilitator Superfamily 13 317 4.9E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_19440 d040c04881739e773f1c295d5759d589 334 Pfam PF00294 pfkB family carbohydrate kinase 47 317 9.3E-55 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB ABD1_19440 d040c04881739e773f1c295d5759d589 334 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABD1_19440 d040c04881739e773f1c295d5759d589 334 SUPERFAMILY SSF53613 2 319 1.51E-77 T 12-10-2018 IPR029056 Ribokinase-like ABD1_19440 d040c04881739e773f1c295d5759d589 334 Gene3D G3DSA:3.30.1110.10 14 133 4.5E-81 T 12-10-2018 ABD1_19440 d040c04881739e773f1c295d5759d589 334 Gene3D G3DSA:3.40.1190.20 7 314 4.5E-81 T 12-10-2018 IPR029056 Ribokinase-like ABD1_19440 d040c04881739e773f1c295d5759d589 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 SUPERFAMILY SSF55729 19 183 1.81E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 6.4E-19 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 6.4E-19 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 6.4E-19 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 6.4E-19 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 PRINTS PR01549 Autoinducer synthesis protein signature 38 60 6.4E-19 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 Gene3D G3DSA:3.40.630.30 3 183 1.5E-48 T 12-10-2018 ABD1_01150 96c35d7c5836275718b3ea4db1ce6c6f 183 Pfam PF00765 Autoinducer synthase 18 181 1.1E-26 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.206 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 SMART SM01387 8 88 1.6E-51 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 SUPERFAMILY SSF47060 3 89 4.41E-35 T 12-10-2018 IPR009068 S15/NS1, RNA-binding ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.9E-38 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-37 T 12-10-2018 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03320 8bfaa2541ec67e17d2423c4666159fc8 89 Gene3D G3DSA:1.10.287.10 2 89 2.9E-35 T 12-10-2018 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 Gene3D G3DSA:3.40.710.10 15 279 1.6E-80 T 12-10-2018 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 241 3.7E-63 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 7.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24690 469424a66c8d5479c280a0af5b0a3ed7 439 SUPERFAMILY SSF56601 3 278 1.23E-68 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 SUPERFAMILY SSF49493 131 217 5.76E-14 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 PRINTS PR00625 DnaJ domain signature 6 24 1.3E-18 T 12-10-2018 IPR001623 DnaJ domain ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 PRINTS PR00625 DnaJ domain signature 24 39 1.3E-18 T 12-10-2018 IPR001623 DnaJ domain ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 PRINTS PR00625 DnaJ domain signature 40 60 1.3E-18 T 12-10-2018 IPR001623 DnaJ domain ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 SMART SM00271 3 60 6.2E-27 T 12-10-2018 IPR001623 DnaJ domain ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 Pfam PF01556 DnaJ C terminal domain 139 291 2.2E-31 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 Pfam PF00226 DnaJ domain 4 65 1.9E-22 T 12-10-2018 IPR001623 DnaJ domain ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 Gene3D G3DSA:1.10.287.110 1 129 1.6E-30 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 Gene3D G3DSA:2.60.260.20 216 316 6.8E-19 T 12-10-2018 ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 SUPERFAMILY SSF49493 221 302 3.66E-15 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 SUPERFAMILY SSF46565 3 99 7.46E-29 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_03360 a605eecf8a38780c337369e52ac62c9c 318 Gene3D G3DSA:2.60.260.20 132 214 6.1E-20 T 12-10-2018 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 Pfam PF00137 ATP synthase subunit C 10 72 8.8E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.2E-7 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.2E-7 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.2E-7 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 Gene3D G3DSA:1.20.20.10 1 77 3.0E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.695 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 SUPERFAMILY SSF81333 2 78 4.05E-18 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ABD1_01520 94b12579d392b38dd17e2e4359e55ecc 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_33860 ade05039006549f2452dd70bfa98de25 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 3.9E-126 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ABD1_33860 ade05039006549f2452dd70bfa98de25 386 SUPERFAMILY SSF56059 6 383 2.05E-75 T 12-10-2018 ABD1_33860 ade05039006549f2452dd70bfa98de25 386 SUPERFAMILY SSF52440 173 274 3.74E-31 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_33860 ade05039006549f2452dd70bfa98de25 386 Gene3D G3DSA:3.30.1490.330 258 342 1.7E-18 T 12-10-2018 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 Gene3D G3DSA:3.40.190.10 122 284 1.7E-37 T 12-10-2018 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 SUPERFAMILY SSF46785 5 88 3.89E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 Gene3D G3DSA:1.10.10.10 4 97 1.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 SUPERFAMILY SSF53850 122 295 3.44E-20 T 12-10-2018 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 Gene3D G3DSA:3.40.190.10 168 273 1.7E-37 T 12-10-2018 ABD1_05250 0cfd70adc317dfdfcc931a0461701c6b 299 Pfam PF03466 LysR substrate binding domain 122 293 2.8E-20 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_08250 92883ff1c61c4e66c57179b0ccb281d1 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 9 88 5.0E-20 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ABD1_08250 92883ff1c61c4e66c57179b0ccb281d1 90 Gene3D G3DSA:3.30.1070.10 21 88 8.9E-21 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 ABD1_08250 92883ff1c61c4e66c57179b0ccb281d1 90 SUPERFAMILY SSF55229 37 89 3.27E-11 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 ABD1_08250 92883ff1c61c4e66c57179b0ccb281d1 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 4.7E-19 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ABD1_08250 92883ff1c61c4e66c57179b0ccb281d1 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 15.573 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 Gene3D G3DSA:3.50.30.80 421 572 4.7E-56 T 12-10-2018 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 SUPERFAMILY SSF143975 3 420 1.7E-137 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 9.2E-253 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 Pfam PF00920 Dehydratase family 34 605 1.5E-224 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 SUPERFAMILY SSF52016 421 607 9.42E-61 T 12-10-2018 ABD1_33580 48c50ce096e91acd2b3821a2862412b4 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.834 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 8.6E-222 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 Gene3D G3DSA:3.40.50.720 174 312 1.6E-149 T 12-10-2018 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 5.3E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 SMART SM00829 12 367 9.3E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 Gene3D G3DSA:3.90.180.10 6 364 1.6E-149 T 12-10-2018 ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 SUPERFAMILY SSF50129 1 184 1.35E-70 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 SUPERFAMILY SSF51735 161 333 4.45E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17650 174040e2b1677efed0a9a2aa4e337c08 369 SUPERFAMILY SSF50129 318 369 3.53E-11 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_08530 0235671a88bcc3eabdf52b00f9ccaadb 122 SUPERFAMILY SSF54637 3 120 2.22E-19 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_08530 0235671a88bcc3eabdf52b00f9ccaadb 122 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 115 7.5E-12 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABD1_08530 0235671a88bcc3eabdf52b00f9ccaadb 122 Pfam PF03061 Thioesterase superfamily 25 113 2.0E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_08530 0235671a88bcc3eabdf52b00f9ccaadb 122 Gene3D G3DSA:3.10.129.10 1 122 2.5E-37 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:2.40.30.10 300 412 1.8E-44 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54980 409 486 4.32E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SMART SM00838 610 698 8.3E-57 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54211 489 609 1.11E-41 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-64 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SMART SM00889 487 608 3.6E-62 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.1E-29 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.230.10 491 697 1.4E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.204 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF00679 Elongation factor G C-terminus 610 696 2.8E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.70.870 413 487 6.8E-33 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.40.50.300 1 299 4.1E-111 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF03764 Elongation factor G, domain IV 486 607 2.8E-41 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.7E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF14492 Elongation Factor G, domain II 411 485 6.9E-35 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54980 613 701 1.01E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF50447 271 411 1.15E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.70.240 614 685 1.4E-86 T 12-10-2018 ABD1_08140 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF52540 6 288 6.12E-105 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_13250 8bb3fd2f93940b9991666fef1264a8b3 160 Gene3D G3DSA:3.40.140.10 3 160 2.1E-50 T 12-10-2018 ABD1_13250 8bb3fd2f93940b9991666fef1264a8b3 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABD1_13250 8bb3fd2f93940b9991666fef1264a8b3 160 SUPERFAMILY SSF53927 5 134 8.87E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABD1_13250 8bb3fd2f93940b9991666fef1264a8b3 160 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 2.4E-22 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABD1_11070 01dc629d4f3cc84f0549d66869852fb6 240 Pfam PF02678 Pirin 8 119 2.3E-35 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABD1_11070 01dc629d4f3cc84f0549d66869852fb6 240 Gene3D G3DSA:2.60.120.10 133 237 8.8E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_11070 01dc629d4f3cc84f0549d66869852fb6 240 PIRSF PIRSF006232 1 238 4.5E-52 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABD1_11070 01dc629d4f3cc84f0549d66869852fb6 240 Gene3D G3DSA:2.60.120.10 12 132 9.7E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_11070 01dc629d4f3cc84f0549d66869852fb6 240 SUPERFAMILY SSF51182 1 233 1.15E-75 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_04010 4bd056604d0fc5099917debbd1ba60dd 366 Gene3D G3DSA:3.40.50.2000 163 348 2.1E-57 T 12-10-2018 ABD1_04010 4bd056604d0fc5099917debbd1ba60dd 366 Pfam PF13439 Glycosyltransferase Family 4 13 165 1.9E-26 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABD1_04010 4bd056604d0fc5099917debbd1ba60dd 366 Gene3D G3DSA:3.40.50.2000 21 361 2.1E-57 T 12-10-2018 ABD1_04010 4bd056604d0fc5099917debbd1ba60dd 366 SUPERFAMILY SSF53756 7 365 1.79E-65 T 12-10-2018 ABD1_04010 4bd056604d0fc5099917debbd1ba60dd 366 Pfam PF00534 Glycosyl transferases group 1 187 339 2.8E-27 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 ABD1_04170 68d612ed3163dc2353eaabc79872b1e8 569 SUPERFAMILY SSF51735 425 559 1.07E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_04170 68d612ed3163dc2353eaabc79872b1e8 569 Gene3D G3DSA:1.20.1530.20 4 399 1.5E-75 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_04170 68d612ed3163dc2353eaabc79872b1e8 569 Pfam PF02254 TrkA-N domain 429 542 1.5E-15 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABD1_04170 68d612ed3163dc2353eaabc79872b1e8 569 Gene3D G3DSA:3.40.50.720 423 566 1.6E-24 T 12-10-2018 ABD1_04170 68d612ed3163dc2353eaabc79872b1e8 569 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 2.3E-70 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABD1_25160 97438a43615bba5c7f99a61dc131afd5 356 Gene3D G3DSA:3.30.160.60 321 356 1.2E-15 T 12-10-2018 ABD1_25160 97438a43615bba5c7f99a61dc131afd5 356 Gene3D G3DSA:1.10.8.1150 57 130 3.0E-7 T 12-10-2018 ABD1_25160 97438a43615bba5c7f99a61dc131afd5 356 Pfam PF02618 YceG-like family 62 347 1.9E-76 T 12-10-2018 IPR003770 Endolytic murein transglycosylase ABD1_25160 97438a43615bba5c7f99a61dc131afd5 356 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 34 353 31.656 T 12-10-2018 IPR003770 Endolytic murein transglycosylase ABD1_25160 97438a43615bba5c7f99a61dc131afd5 356 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 31 355 2.7E-84 T 12-10-2018 IPR003770 Endolytic murein transglycosylase ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Pfam PF02824 TGS domain 4 61 3.4E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 SUPERFAMILY SSF55681 242 525 1.42E-97 T 12-10-2018 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Gene3D G3DSA:3.30.54.20 130 186 6.3E-61 T 12-10-2018 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Pfam PF03129 Anticodon binding domain 540 629 5.1E-19 T 12-10-2018 IPR004154 Anticodon-binding ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 4.6E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Gene3D G3DSA:3.40.50.800 531 637 1.3E-28 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 4.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 4.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 4.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 4.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 4.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.41 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 SMART SM00863 169 218 1.8E-20 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 SUPERFAMILY SSF52954 528 632 1.66E-29 T 12-10-2018 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Gene3D G3DSA:3.10.20.30 3 63 5.8E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Gene3D G3DSA:3.30.980.10 69 221 6.3E-61 T 12-10-2018 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 SUPERFAMILY SSF55186 63 240 1.26E-64 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Gene3D G3DSA:3.30.930.10 222 530 7.2E-129 T 12-10-2018 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 6.7E-223 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 1.0E-45 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_05970 71f5420aed1132ee862105cc398a3d08 640 SUPERFAMILY SSF81271 3 61 4.58E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABD1_01910 7be3d766907fffb5fac500aff0821475 439 Pfam PF00083 Sugar (and other) transporter 51 437 5.7E-47 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_01910 7be3d766907fffb5fac500aff0821475 439 SUPERFAMILY SSF103473 9 436 7.06E-91 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_01910 7be3d766907fffb5fac500aff0821475 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_01910 7be3d766907fffb5fac500aff0821475 439 Gene3D G3DSA:1.20.1250.20 12 438 1.3E-91 T 12-10-2018 ABD1_01910 7be3d766907fffb5fac500aff0821475 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_01910 7be3d766907fffb5fac500aff0821475 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 Gene3D G3DSA:2.60.40.2070 747 829 3.2E-9 T 12-10-2018 ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 Pfam PF13953 PapC C-terminal domain 751 809 3.7E-14 T 12-10-2018 IPR025949 PapC-like, C-terminal domain ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 Pfam PF00577 Outer membrane usher protein 241 740 9.1E-36 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 Gene3D G3DSA:2.60.40.2610 653 744 2.3E-11 T 12-10-2018 ABD1_22110 89cb5d77159f09f86d23ca7b3299508d 832 Gene3D G3DSA:2.60.40.3110 269 357 9.6E-9 T 12-10-2018 ABD1_28480 ebff856cf3e1cbef2136fa9a80165ba0 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 3.1E-129 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 ABD1_28480 ebff856cf3e1cbef2136fa9a80165ba0 308 Gene3D G3DSA:3.20.10.10 131 308 7.0E-53 T 12-10-2018 ABD1_28480 ebff856cf3e1cbef2136fa9a80165ba0 308 SUPERFAMILY SSF56752 2 304 3.79E-102 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABD1_28480 ebff856cf3e1cbef2136fa9a80165ba0 308 Pfam PF01063 Amino-transferase class IV 36 268 6.2E-53 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABD1_28480 ebff856cf3e1cbef2136fa9a80165ba0 308 Gene3D G3DSA:3.30.470.10 2 130 2.5E-39 T 12-10-2018 ABD1_31090 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:3.40.50.2300 7 141 1.2E-40 T 12-10-2018 ABD1_31090 75226437212a625825f44d004e0e1050 254 SMART SM00862 172 248 6.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_31090 75226437212a625825f44d004e0e1050 254 SMART SM00448 21 132 1.1E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31090 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF52172 22 143 7.12E-42 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_31090 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF46894 154 250 6.52E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_31090 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:1.10.10.10 146 254 3.2E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31090 75226437212a625825f44d004e0e1050 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 248 1.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_31090 75226437212a625825f44d004e0e1050 254 Pfam PF00072 Response regulator receiver domain 23 133 1.7E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 342 4.4E-71 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 Gene3D G3DSA:3.40.50.300 117 284 1.8E-44 T 12-10-2018 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 349 33.121 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 Gene3D G3DSA:2.40.50.140 31 116 3.5E-17 T 12-10-2018 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 SUPERFAMILY SSF52540 128 348 3.32E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 Pfam PF03193 RsgA GTPase 114 285 1.7E-50 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 ABD1_05010 3305b7d4adde04fa4d194046644e3c53 352 Gene3D G3DSA:1.10.40.50 285 352 1.6E-21 T 12-10-2018 ABD1_22040 41542a7901aa3fa7cb46712166cb1e62 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_22040 41542a7901aa3fa7cb46712166cb1e62 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_22040 41542a7901aa3fa7cb46712166cb1e62 184 Gene3D G3DSA:1.10.357.10 6 179 1.0E-20 T 12-10-2018 ABD1_22040 41542a7901aa3fa7cb46712166cb1e62 184 SUPERFAMILY SSF46689 12 69 2.62E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_22040 41542a7901aa3fa7cb46712166cb1e62 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.3E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 PIRSF PIRSF000770 12 288 2.3E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF04545 Sigma-70, region 4 232 282 7.8E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 287 52.265 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 7.1E-124 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 285 1.3E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Gene3D G3DSA:1.10.10.10 211 287 7.6E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 255 270 9.6E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 9.6E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 270 281 9.6E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.6E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 SUPERFAMILY SSF88946 19 126 5.49E-40 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 SUPERFAMILY SSF88659 200 285 5.61E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABD1_22590 5c54d4a4597b8a669ba4d85f5146ccf6 288 Gene3D G3DSA:1.20.120.1810 19 126 2.0E-27 T 12-10-2018 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 Gene3D G3DSA:3.40.720.10 299 503 1.6E-51 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 Gene3D G3DSA:3.40.720.10 34 202 3.7E-30 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 Pfam PF04185 Phosphoesterase family 45 454 1.4E-112 T 12-10-2018 IPR007312 Phosphoesterase GO:0016788 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 Pfam PF05506 Domain of unknown function (DUF756) 526 612 2.8E-23 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 Pfam PF05506 Domain of unknown function (DUF756) 623 704 5.2E-14 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_00420 16d20fe22709cfc5f166305bf5fe4ffc 722 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 2 718 4.0E-281 T 12-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_00100 32ddf677c7e037638456eb84db9adb47 334 Gene3D G3DSA:3.40.190.170 47 243 6.0E-11 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.0017 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SUPERFAMILY SSF53474 1049 1313 2.03E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 ProSitePatterns PS00455 Putative AMP-binding domain signature. 622 633 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:3.30.300.30 867 967 4.2E-32 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SUPERFAMILY SSF52777 18 187 2.22E-24 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SUPERFAMILY SSF47336 969 1042 2.75E-18 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Pfam PF00501 AMP-binding enzyme 488 872 8.9E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:3.30.559.10 17 394 1.8E-89 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Pfam PF00975 Thioesterase domain 1064 1313 5.0E-31 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Pfam PF00668 Condensation domain 17 460 7.9E-67 T 12-10-2018 IPR001242 Condensation domain ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:3.30.559.30 191 451 1.8E-89 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Pfam PF13193 AMP-binding enzyme C-terminal domain 880 952 2.7E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SUPERFAMILY SSF52777 192 456 1.78E-46 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 506 896 3.6E-118 T 12-10-2018 IPR010071 Amino acid adenylation domain ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:3.40.50.12780 471 866 5.3E-112 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SUPERFAMILY SSF56801 475 990 2.75E-138 T 12-10-2018 ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:1.10.1200.10 968 1047 2.0E-23 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Pfam PF00550 Phosphopantetheine attachment site 980 1040 1.7E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 Gene3D G3DSA:3.40.50.1820 1048 1314 8.2E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01210 8e3e89995c09765a3d3b1c5d557ff46a 1319 SMART SM00824 Thioesterase 1076 1315 0.0012 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 SUPERFAMILY SSF51735 117 293 2.48E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 Gene3D G3DSA:3.90.180.10 19 328 5.9E-111 T 12-10-2018 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 105 9.5E-12 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 Gene3D G3DSA:3.40.50.720 126 267 5.9E-111 T 12-10-2018 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 SUPERFAMILY SSF50129 7 146 8.33E-42 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 Pfam PF00107 Zinc-binding dehydrogenase 157 274 2.2E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 330 2.1E-147 T 12-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 ABD1_27120 accadaa8586406af03f4f08b63440e9b 332 SMART SM00829 16 328 1.6E-64 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 Pfam PF09278 MerR, DNA binding 45 106 3.2E-15 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 SUPERFAMILY SSF46955 1 125 2.05E-35 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 Gene3D G3DSA:1.10.1660.10 1 125 1.4E-33 T 12-10-2018 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.3E-48 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12280 2a25ff2a92f076a378b5aa599d111cb1 133 SMART SM00422 1 70 4.1E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_24350 b0a6c4d9aa37155121e16985d41d5f52 343 Pfam PF12849 PBP superfamily domain 20 307 2.7E-41 T 12-10-2018 IPR024370 PBP domain ABD1_24350 b0a6c4d9aa37155121e16985d41d5f52 343 Gene3D G3DSA:3.40.190.10 29 309 1.8E-50 T 12-10-2018 ABD1_24350 b0a6c4d9aa37155121e16985d41d5f52 343 Gene3D G3DSA:3.40.190.10 115 281 1.8E-50 T 12-10-2018 ABD1_24350 b0a6c4d9aa37155121e16985d41d5f52 343 SUPERFAMILY SSF53850 28 337 2.39E-60 T 12-10-2018 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 Gene3D G3DSA:1.10.3880.10 1 89 2.1E-34 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.915 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 SUPERFAMILY SSF111148 1 88 9.55E-36 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 PIRSF PIRSF029827 1 89 2.5E-38 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ABD1_02410 dbb319b75cbdf29617c48ca1f5cfe462 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 8.0E-35 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF47384 129 196 4.9E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 361 3.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00387 241 364 4.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00388 137 201 7.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 83 1.7E-6 T 12-10-2018 IPR000014 PAS domain ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF00989 PAS fold 8 97 5.1E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 1.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:3.30.450.20 9 120 7.8E-16 T 12-10-2018 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF55874 203 362 5.89E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:3.30.565.10 200 362 2.4E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00091 7 75 2.4E-6 T 12-10-2018 IPR000014 PAS domain ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:1.10.287.130 140 197 9.3E-15 T 12-10-2018 ABD1_20030 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF55785 9 100 1.39E-9 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_10270 3d6d74bc8f965ed7f6cc5cd2cc0a111a 221 Pfam PF10281 Putative stress-responsive nuclear envelope protein 186 217 1.6E-7 T 12-10-2018 IPR018803 Putative stress-responsive protein ABD1_10270 3d6d74bc8f965ed7f6cc5cd2cc0a111a 221 Gene3D G3DSA:1.20.890.90 189 221 3.1E-5 T 12-10-2018 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 Pfam PF07690 Major Facilitator Superfamily 27 333 4.6E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 Gene3D G3DSA:1.20.1250.20 247 446 1.6E-24 T 12-10-2018 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 Gene3D G3DSA:1.20.1250.20 11 226 8.4E-46 T 12-10-2018 ABD1_17320 7d3219501f3ccde5ee35c77d3eb2af46 452 SUPERFAMILY SSF103473 9 431 3.79E-81 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 248 281 6.4E-5 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 299 333 1.9E-7 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 436 5.6E-187 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 385 413 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Gene3D G3DSA:3.90.550.10 1 209 6.9E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Pfam PF12804 MobA-like NTP transferase domain 4 111 1.2E-12 T 12-10-2018 IPR025877 MobA-like NTP transferase ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 SUPERFAMILY SSF51161 237 418 1.18E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 377 411 3.5E-9 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 SUPERFAMILY SSF53448 1 234 7.43E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Gene3D G3DSA:2.160.10.10 210 438 3.1E-72 T 12-10-2018 ABD1_32960 fd045955736917d7db88d11279a1f7a6 439 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 434 39.575 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 Gene3D G3DSA:3.90.380.10 22 423 2.3E-112 T 12-10-2018 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 Gene3D G3DSA:2.102.10.10 45 168 2.3E-112 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 424 8.2E-18 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 1.0E-36 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 8.5E-22 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 SUPERFAMILY SSF55961 163 425 9.42E-52 T 12-10-2018 ABD1_18830 349d1cad8ddaeb7d0aab9bff0e96f687 425 SUPERFAMILY SSF50022 13 159 2.75E-49 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 741 8.1E-285 T 12-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 Gene3D G3DSA:3.40.720.10 35 208 2.4E-30 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 Gene3D G3DSA:3.40.720.10 320 525 7.3E-49 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 Pfam PF04185 Phosphoesterase family 46 476 1.3E-102 T 12-10-2018 IPR007312 Phosphoesterase GO:0016788 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 Pfam PF05506 Domain of unknown function (DUF756) 646 728 2.9E-21 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_20510 6fe002030a7d8d4919f34c10dd1aa851 742 Pfam PF05506 Domain of unknown function (DUF756) 548 635 8.4E-23 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 ABD1_11950 144e6d95a58d355d1f15742c79952f14 141 Gene3D G3DSA:3.40.630.30 1 140 4.9E-29 T 12-10-2018 ABD1_11950 144e6d95a58d355d1f15742c79952f14 141 Pfam PF00583 Acetyltransferase (GNAT) family 32 128 4.8E-13 T 12-10-2018 IPR000182 GNAT domain ABD1_11950 144e6d95a58d355d1f15742c79952f14 141 SUPERFAMILY SSF55729 2 133 9.49E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 SUPERFAMILY SSF54506 5 288 1.17E-74 T 12-10-2018 ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 PIRSF PIRSF016184 1 289 1.6E-83 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 289 3.2E-76 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 Gene3D G3DSA:3.10.310.10 126 281 1.1E-89 T 12-10-2018 ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 Pfam PF02567 Phenazine biosynthesis-like protein 9 285 3.8E-69 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_22930 3f3aa96549c9cf481f3545058330a941 289 Gene3D G3DSA:3.10.310.10 7 283 1.1E-89 T 12-10-2018 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 SUPERFAMILY SSF55681 11 204 3.07E-63 T 12-10-2018 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 131 8.0E-23 T 12-10-2018 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 160 2.7E-9 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Hamap MF_00013 Octanoyltransferase [lipB]. 7 210 33.727 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 PIRSF PIRSF016262 4 210 3.5E-58 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Gene3D G3DSA:3.30.930.10 5 206 8.6E-57 T 12-10-2018 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 199 1.9E-57 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABD1_26660 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 74 89 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.465 T 12-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.0E-125 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 Gene3D G3DSA:3.20.20.70 3 381 1.6E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 PIRSF PIRSF000138 2 380 1.5E-121 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 ABD1_00720 768d596cdb76a8586275bf6cd729c537 383 SUPERFAMILY SSF51395 5 376 2.2E-99 T 12-10-2018 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 Gene3D G3DSA:3.40.190.10 235 587 1.7E-89 T 12-10-2018 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 SUPERFAMILY SSF53850 35 599 1.43E-86 T 12-10-2018 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 Gene3D G3DSA:3.10.105.10 346 575 1.7E-89 T 12-10-2018 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 PIRSF PIRSF002741 4 599 1.9E-54 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 Gene3D G3DSA:3.90.76.10 54 234 1.7E-89 T 12-10-2018 ABD1_15960 cd5d03697c4ae4df4f512a3909ec90b9 606 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 517 4.6E-63 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 Pfam PF00271 Helicase conserved C-terminal domain 250 349 2.1E-25 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 Gene3D G3DSA:3.40.50.300 1 220 5.0E-71 T 12-10-2018 ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 SMART SM00490 268 349 3.8E-32 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 SUPERFAMILY SSF52540 84 370 3.36E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 Gene3D G3DSA:3.40.50.300 222 389 1.2E-47 T 12-10-2018 ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 SMART SM00487 22 231 3.9E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_29910 cd9e05a122bad57570c572fe19d39863 615 Pfam PF00270 DEAD/DEAH box helicase 27 201 3.2E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_05650 4d7b682d1ab2f766e070176f07710ee7 97 Gene3D G3DSA:1.10.10.10 30 79 5.8E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_05650 4d7b682d1ab2f766e070176f07710ee7 97 Pfam PF13412 Winged helix-turn-helix DNA-binding 32 78 5.4E-11 T 12-10-2018 ABD1_05650 4d7b682d1ab2f766e070176f07710ee7 97 SUPERFAMILY SSF46785 31 85 4.75E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06610 702522e14f122ace463e55039b9be55f 406 SUPERFAMILY SSF56266 14 403 7.06E-140 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABD1_06610 702522e14f122ace463e55039b9be55f 406 Gene3D G3DSA:3.10.20.340 277 406 5.6E-45 T 12-10-2018 ABD1_06610 702522e14f122ace463e55039b9be55f 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 153.736 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABD1_06610 702522e14f122ace463e55039b9be55f 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 1.2E-125 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABD1_06610 702522e14f122ace463e55039b9be55f 406 Pfam PF01960 ArgJ family 20 406 8.9E-144 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABD1_06610 702522e14f122ace463e55039b9be55f 406 Gene3D G3DSA:3.60.70.12 7 276 9.7E-90 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABD1_06610 702522e14f122ace463e55039b9be55f 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 2.0E-177 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 Pfam PF00117 Glutamine amidotransferase class-I 196 372 1.1E-46 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 SUPERFAMILY SSF52317 157 376 4.95E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.284 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.8E-11 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 2.4E-52 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 SUPERFAMILY SSF52021 4 143 9.55E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 SMART SM01097 3 136 2.1E-91 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.6E-143 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 3.6E-39 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.6E-39 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.6E-39 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 3.6E-39 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 3.6E-39 T 12-10-2018 ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 Gene3D G3DSA:3.40.50.880 155 377 2.8E-70 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_26370 1ba4fb12cfb424bf68a7fe1612e96436 379 Gene3D G3DSA:3.50.30.20 3 154 4.5E-59 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABD1_08400 5ac258eb3b207d93232703e15c895653 132 Pfam PF04355 SmpA / OmlA family 30 106 1.9E-23 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 ABD1_08400 5ac258eb3b207d93232703e15c895653 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 117 31.643 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE ABD1_08400 5ac258eb3b207d93232703e15c895653 132 Gene3D G3DSA:3.30.1450.10 29 117 3.9E-23 T 12-10-2018 IPR037873 BamE-like ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 3.6E-45 T 12-10-2018 ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 8.8E-6 T 12-10-2018 ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 4.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 Gene3D G3DSA:3.40.50.720 221 462 1.5E-60 T 12-10-2018 ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 SUPERFAMILY SSF51735 222 457 2.61E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_20570 bdfb3f163d23afab02aaefdc2c59c895 463 Gene3D G3DSA:3.40.50.720 24 219 2.8E-56 T 12-10-2018 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 Gene3D G3DSA:3.90.220.20 230 388 1.4E-32 T 12-10-2018 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 Pfam PF01420 Type I restriction modification DNA specificity domain 43 165 1.3E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 Pfam PF01420 Type I restriction modification DNA specificity domain 242 418 1.7E-18 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 SUPERFAMILY SSF116734 228 442 1.64E-40 T 12-10-2018 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 SUPERFAMILY SSF116734 11 182 6.54E-24 T 12-10-2018 ABD1_05660 ceb0871ef585559c85a6af438f1fc904 445 Gene3D G3DSA:3.90.220.20 2 176 4.2E-23 T 12-10-2018 ABD1_17180 a92981974855678e9eec24ea4a79c749 729 Gene3D G3DSA:2.40.170.20 178 729 9.9E-81 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_17180 a92981974855678e9eec24ea4a79c749 729 Gene3D G3DSA:2.170.130.10 50 177 4.4E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_17180 a92981974855678e9eec24ea4a79c749 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site ABD1_17180 a92981974855678e9eec24ea4a79c749 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 5.7E-10 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_17180 a92981974855678e9eec24ea4a79c749 729 Pfam PF00593 TonB dependent receptor 261 727 7.2E-38 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_17180 a92981974855678e9eec24ea4a79c749 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 729 5.1E-119 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_17180 a92981974855678e9eec24ea4a79c749 729 SUPERFAMILY SSF56935 32 729 8.63E-98 T 12-10-2018 ABD1_19860 eb74210b5f1e0093be4db630ced4b63f 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 181 2.3E-18 T 12-10-2018 ABD1_19860 eb74210b5f1e0093be4db630ced4b63f 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 5 180 6.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_19860 eb74210b5f1e0093be4db630ced4b63f 228 Gene3D G3DSA:3.40.50.1000 2 194 3.1E-25 T 12-10-2018 IPR023214 HAD superfamily ABD1_19860 eb74210b5f1e0093be4db630ced4b63f 228 SUPERFAMILY SSF56784 1 212 1.25E-31 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 134 5.5E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 Gene3D G3DSA:2.40.170.20 150 736 5.3E-133 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 Pfam PF00593 TonB dependent receptor 210 735 2.3E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 SUPERFAMILY SSF56935 5 736 4.21E-123 T 12-10-2018 ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 38 735 5.4E-89 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_04470 e89cd90528c2b5ff23f3b416ef78e1c7 736 Gene3D G3DSA:2.170.130.10 18 146 3.0E-38 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_31780 d54a4d972033c518471a40eb89653f02 480 Pfam PF00324 Amino acid permease 24 433 2.3E-104 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_31780 d54a4d972033c518471a40eb89653f02 480 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_31780 d54a4d972033c518471a40eb89653f02 480 Gene3D G3DSA:1.20.1740.10 16 469 1.1E-61 T 12-10-2018 ABD1_31780 d54a4d972033c518471a40eb89653f02 480 PIRSF PIRSF006060 2 478 7.4E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 9.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 9.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 9.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 9.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 9.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 SMART SM00226 4 141 2.4E-59 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 SUPERFAMILY SSF52788 2 141 1.83E-40 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 1.8E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABD1_00500 bf674a8abd1c04f895538ca0daecd0cd 142 Gene3D G3DSA:3.40.50.2300 1 142 2.2E-45 T 12-10-2018 ABD1_12920 aff841175e622587786d5cc0647af4c8 254 Gene3D G3DSA:3.20.20.370 1 253 1.0E-100 T 12-10-2018 ABD1_12920 aff841175e622587786d5cc0647af4c8 254 SUPERFAMILY SSF88713 1 251 1.19E-100 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_12920 aff841175e622587786d5cc0647af4c8 254 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 44.7 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ABD1_12920 aff841175e622587786d5cc0647af4c8 254 Pfam PF03746 LamB/YcsF family 3 240 1.8E-99 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ABD1_13850 931c2e15878eb90538371721580dd838 136 Gene3D G3DSA:3.90.950.20 1 134 2.5E-25 T 12-10-2018 IPR036653 CinA-like, C-terminal ABD1_13850 931c2e15878eb90538371721580dd838 136 Pfam PF02464 Competence-damaged protein 4 122 4.3E-21 T 12-10-2018 IPR008136 CinA, C-terminal ABD1_13850 931c2e15878eb90538371721580dd838 136 SUPERFAMILY SSF142433 3 125 8.37E-28 T 12-10-2018 IPR036653 CinA-like, C-terminal ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SUPERFAMILY SSF55874 714 881 1.22E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Pfam PF00582 Universal stress protein family 251 366 2.8E-6 T 12-10-2018 IPR006016 UspA ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Pfam PF13493 Domain of unknown function (DUF4118) 403 500 1.3E-18 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:1.20.120.620 394 500 2.0E-18 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 773 878 6.7E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:1.10.287.130 649 723 2.8E-18 T 12-10-2018 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:3.40.50.620 228 370 3.0E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:3.30.450.40 512 648 6.4E-21 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_21370 f942603eddce70812df08ad9e517b26d 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 878 3.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 3.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 3.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 3.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SUPERFAMILY SSF52540 21 190 7.41E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:3.30.565.10 736 880 1.5E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 1.8E-92 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SUPERFAMILY SSF52402 251 368 1.0E-7 T 12-10-2018 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SUPERFAMILY SSF47384 648 724 1.86E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Gene3D G3DSA:3.40.50.300 19 227 2.5E-95 T 12-10-2018 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SMART SM00387 768 881 1.2E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_21370 f942603eddce70812df08ad9e517b26d 884 SMART SM00388 656 724 7.9E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_21370 f942603eddce70812df08ad9e517b26d 884 Pfam PF00512 His Kinase A (phospho-acceptor) domain 657 723 1.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 5.6E-35 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 12-10-2018 ABD1_21840 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_08500 db924801d460127ed5a1e0a8cc616043 301 Pfam PF08338 Domain of unknown function (DUF1731) 252 297 2.1E-14 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 ABD1_08500 db924801d460127ed5a1e0a8cc616043 301 SUPERFAMILY SSF51735 3 261 1.72E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_08500 db924801d460127ed5a1e0a8cc616043 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 220 1.8E-22 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_08500 db924801d460127ed5a1e0a8cc616043 301 Gene3D G3DSA:3.40.50.720 4 300 1.3E-68 T 12-10-2018 ABD1_08500 db924801d460127ed5a1e0a8cc616043 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 294 1.0E-86 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 ABD1_21350 e5c4c24e1cf4f855c03907bfbebc692c 474 Pfam PF00120 Glutamine synthetase, catalytic domain 151 471 6.2E-84 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_21350 e5c4c24e1cf4f855c03907bfbebc692c 474 SUPERFAMILY SSF55931 150 472 3.27E-84 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABD1_21350 e5c4c24e1cf4f855c03907bfbebc692c 474 Gene3D G3DSA:3.30.590.10 147 473 1.1E-85 T 12-10-2018 ABD1_21350 e5c4c24e1cf4f855c03907bfbebc692c 474 SMART SM01230 149 395 5.4E-74 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 Pfam PF10150 Ribonuclease E/G family 100 372 7.5E-103 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 Pfam PF00575 S1 RNA binding domain 23 96 4.3E-5 T 12-10-2018 IPR003029 S1 domain GO:0003676 ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 SMART SM00316 22 98 7.2E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 SUPERFAMILY SSF50249 24 103 8.12E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 Gene3D G3DSA:2.40.50.140 16 103 2.4E-25 T 12-10-2018 ABD1_27240 d498a671fe10b363322a1b19057bae1d 469 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 1 405 2.8E-153 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ABD1_26870 c71a5e08b32a2edbdfafc5ef77941da6 144 Gene3D G3DSA:3.10.450.50 3 138 4.8E-19 T 12-10-2018 ABD1_26870 c71a5e08b32a2edbdfafc5ef77941da6 144 SUPERFAMILY SSF54427 1 129 1.47E-19 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_26870 c71a5e08b32a2edbdfafc5ef77941da6 144 Pfam PF13577 SnoaL-like domain 4 121 1.0E-11 T 12-10-2018 IPR037401 SnoaL-like domain ABD1_32920 cddf5644c2b9760b29f96605f6014ae0 149 SUPERFAMILY SSF48013 10 141 3.01E-37 T 12-10-2018 IPR035926 NusB-like superfamily ABD1_32920 cddf5644c2b9760b29f96605f6014ae0 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 20.952 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABD1_32920 cddf5644c2b9760b29f96605f6014ae0 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 138 4.9E-39 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABD1_32920 cddf5644c2b9760b29f96605f6014ae0 149 Gene3D G3DSA:1.10.940.10 6 145 8.9E-45 T 12-10-2018 IPR035926 NusB-like superfamily ABD1_32920 cddf5644c2b9760b29f96605f6014ae0 149 Pfam PF01029 NusB family 13 136 5.2E-29 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ABD1_27900 9f6dd9cf704db4442dadc3aa419c60a0 117 Gene3D G3DSA:1.10.3730.20 12 115 1.9E-16 T 12-10-2018 ABD1_27900 9f6dd9cf704db4442dadc3aa419c60a0 117 Pfam PF00893 Small Multidrug Resistance protein 12 102 3.5E-12 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABD1_27900 9f6dd9cf704db4442dadc3aa419c60a0 117 SUPERFAMILY SSF103481 14 113 2.62E-13 T 12-10-2018 ABD1_00450 4fec2a5074c3d7c90330d939c4bfa2e1 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 173 1.6E-25 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABD1_00450 4fec2a5074c3d7c90330d939c4bfa2e1 189 SMART SM00644 22 172 2.0E-40 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABD1_00450 4fec2a5074c3d7c90330d939c4bfa2e1 189 SUPERFAMILY SSF55846 10 185 1.27E-62 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABD1_00450 4fec2a5074c3d7c90330d939c4bfa2e1 189 Gene3D G3DSA:3.40.80.10 9 189 7.2E-57 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Hamap MF_00900 GTPase HflX [hflX]. 28 390 46.648 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Gene3D G3DSA:3.40.50.11060 18 139 2.9E-38 T 12-10-2018 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 361 5.2E-145 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 PIRSF PIRSF006809 5 421 1.1E-137 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 241 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 SUPERFAMILY SSF52540 199 373 6.85E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Pfam PF01926 50S ribosome-binding GTPase 202 319 5.7E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 1.9E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Pfam PF16360 GTP-binding GTPase Middle Region 115 194 1.1E-27 T 12-10-2018 IPR032305 GTP-binding protein, middle domain ABD1_28820 9bf7247e0cd45cc20c2e687a1f6e0a42 444 Gene3D G3DSA:3.40.50.300 199 366 3.0E-36 T 12-10-2018 ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 Gene3D G3DSA:3.30.700.10 7 148 1.4E-38 T 12-10-2018 ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.4E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 Pfam PF00114 Pilin (bacterial filament) 35 145 2.7E-9 T 12-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 SUPERFAMILY SSF54523 7 135 7.32E-23 T 12-10-2018 ABD1_30660 316fe68c765b29c71f89b1f65ce23dab 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_00340 5e7f812b73f6a45942599820afdb99cd 237 SUPERFAMILY SSF53335 14 230 1.56E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_00340 5e7f812b73f6a45942599820afdb99cd 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.866 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ABD1_00340 5e7f812b73f6a45942599820afdb99cd 237 Pfam PF13489 Methyltransferase domain 50 203 2.3E-25 T 12-10-2018 ABD1_00340 5e7f812b73f6a45942599820afdb99cd 237 Gene3D G3DSA:3.40.50.150 10 234 6.0E-78 T 12-10-2018 ABD1_00340 5e7f812b73f6a45942599820afdb99cd 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 7.0E-90 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Pfam PF02910 Fumarate reductase flavoprotein C-term 475 610 2.2E-34 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF56425 246 364 3.44E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 606 1.1E-229 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 PIRSF PIRSF000171 8 592 1.9E-34 T 12-10-2018 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:1.20.58.100 446 559 6.8E-31 T 12-10-2018 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:3.50.50.60 19 427 2.8E-162 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Pfam PF00890 FAD binding domain 19 416 1.8E-116 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF46977 465 611 1.09E-38 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:3.90.700.10 256 359 2.8E-162 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF51905 14 444 2.59E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26550 41fe786c3011bd98fe8bb5ed1b45fc3a 611 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 17 611 7.0E-265 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_00750 b8f758b731588f76f9636b133d15f490 236 SMART SM00345 22 80 8.4E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_00750 b8f758b731588f76f9636b133d15f490 236 SUPERFAMILY SSF46785 14 106 1.95E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00750 b8f758b731588f76f9636b133d15f490 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_00750 b8f758b731588f76f9636b133d15f490 236 SUPERFAMILY SSF48008 86 223 3.66E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_00750 b8f758b731588f76f9636b133d15f490 236 SMART SM00895 90 217 2.5E-21 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_00750 b8f758b731588f76f9636b133d15f490 236 Gene3D G3DSA:1.20.120.530 85 231 5.7E-30 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_00750 b8f758b731588f76f9636b133d15f490 236 Gene3D G3DSA:1.10.10.10 6 80 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_00750 b8f758b731588f76f9636b133d15f490 236 Pfam PF07729 FCD domain 90 216 6.9E-25 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 12-10-2018 ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29450 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 Gene3D G3DSA:1.10.3210.10 310 505 6.3E-58 T 12-10-2018 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 SUPERFAMILY SSF109604 313 502 4.49E-46 T 12-10-2018 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 Pfam PF02541 Ppx/GppA phosphatase family 25 308 8.8E-82 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 Gene3D G3DSA:3.30.420.150 115 295 4.1E-89 T 12-10-2018 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 PIRSF PIRSF001267 1 502 3.8E-197 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 Gene3D G3DSA:3.30.420.40 12 303 4.1E-89 T 12-10-2018 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 1.1E-96 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 SUPERFAMILY SSF53067 11 131 1.05E-34 T 12-10-2018 ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 Pfam PF01966 HD domain 335 415 5.0E-5 T 12-10-2018 IPR006674 HD domain ABD1_06130 d0a2f3568fa11ab4bd6296cc0ac4b87c 506 SUPERFAMILY SSF53067 135 310 4.7E-47 T 12-10-2018 ABD1_03990 488c1308db01eb18619ba8a71935fd2a 373 Gene3D G3DSA:3.60.10.10 105 322 4.7E-20 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_03990 488c1308db01eb18619ba8a71935fd2a 373 SUPERFAMILY SSF56219 102 319 4.97E-32 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABD1_03990 488c1308db01eb18619ba8a71935fd2a 373 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 119 312 1.5E-14 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 Pfam PF00717 Peptidase S24-like 139 204 5.9E-9 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 SUPERFAMILY SSF47413 2 64 9.57E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 Gene3D G3DSA:2.10.109.10 100 222 3.6E-14 T 12-10-2018 ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 Gene3D G3DSA:1.10.260.40 2 70 1.1E-17 T 12-10-2018 ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 SMART SM00530 6 60 7.8E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 Pfam PF12844 Helix-turn-helix domain 6 64 2.3E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_12370 949ec8a2de7583cf8c7110d81209de61 223 SUPERFAMILY SSF51306 99 220 4.53E-18 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_14670 2c3b651a8a46778b29827e92133ae6eb 139 SUPERFAMILY SSF51316 4 138 2.25E-59 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_14670 2c3b651a8a46778b29827e92133ae6eb 139 Pfam PF01641 SelR domain 10 128 3.9E-55 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABD1_14670 2c3b651a8a46778b29827e92133ae6eb 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 138 1.8E-56 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABD1_14670 2c3b651a8a46778b29827e92133ae6eb 139 Gene3D G3DSA:2.170.150.20 2 139 1.4E-62 T 12-10-2018 ABD1_14670 2c3b651a8a46778b29827e92133ae6eb 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 36.983 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 SUPERFAMILY SSF46785 177 315 5.15E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 SMART SM00903 22 165 6.8E-60 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 Pfam PF01613 Flavin reductase like domain 23 163 1.4E-35 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 Gene3D G3DSA:2.30.110.10 11 183 9.8E-53 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 Gene3D G3DSA:1.10.10.10 184 317 3.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18790 b9a51abc43738a7417bdf6e356d14722 318 SUPERFAMILY SSF50475 7 168 2.31E-50 T 12-10-2018 ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 36.725 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 9.4E-51 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 Gene3D G3DSA:2.40.50.100 1 124 5.2E-50 T 12-10-2018 ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 SUPERFAMILY SSF51230 3 122 3.04E-45 T 12-10-2018 IPR011053 Single hybrid motif ABD1_15400 0befd6783255979efd439b5b9ff58e26 124 Pfam PF01597 Glycine cleavage H-protein 7 122 3.0E-46 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate ABD1_22340 6b99f942052d394e5db327803818daab 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 266 303 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_22340 6b99f942052d394e5db327803818daab 458 PIRSF PIRSF000521 46 156 0.0064 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_22340 6b99f942052d394e5db327803818daab 458 PIRSF PIRSF000521 192 457 4.0E-20 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_22340 6b99f942052d394e5db327803818daab 458 Gene3D G3DSA:3.40.640.10 79 361 4.2E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_22340 6b99f942052d394e5db327803818daab 458 SUPERFAMILY SSF53383 29 454 8.52E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_22340 6b99f942052d394e5db327803818daab 458 Gene3D G3DSA:3.90.1150.10 43 450 4.2E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_22340 6b99f942052d394e5db327803818daab 458 Pfam PF00202 Aminotransferase class-III 45 454 2.2E-86 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 2.4E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 145 164 2.4E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 336 352 2.4E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 337 347 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 150 161 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 Gene3D G3DSA:3.40.50.200 116 391 1.4E-91 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 SUPERFAMILY SSF54897 39 113 5.67E-8 T 12-10-2018 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 Pfam PF05922 Peptidase inhibitor I9 43 113 4.6E-5 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 SUPERFAMILY SSF52743 117 374 1.24E-75 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 Gene3D G3DSA:3.30.70.80 35 113 9.5E-13 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ABD1_19770 5d0e8a8e29bda1fd63a2d3571da12755 392 Pfam PF00082 Subtilase family 146 377 1.0E-35 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 SUPERFAMILY SSF54675 6 112 1.58E-30 T 12-10-2018 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 Gene3D G3DSA:3.20.20.70 123 269 1.0E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 1.4E-96 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 Gene3D G3DSA:3.90.1170.20 10 278 1.0E-111 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 2.5E-59 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 SUPERFAMILY SSF51690 114 279 5.49E-61 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 1.8E-24 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ABD1_00440 ba62eadff717138ffb2db1f6c674f9d4 281 PIRSF PIRSF006250 6 281 1.2E-97 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ABD1_02120 80d8a5c234dc19c61faeedb6807b48a5 135 SUPERFAMILY SSF102400 1 134 3.92E-31 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily ABD1_02120 80d8a5c234dc19c61faeedb6807b48a5 135 Gene3D G3DSA:3.40.50.10110 1 134 5.6E-30 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily ABD1_02120 80d8a5c234dc19c61faeedb6807b48a5 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 4.6E-29 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ABD1_27000 f1c7ada8e6f8a33b03794067277189ce 443 Gene3D G3DSA:2.40.160.10 94 443 1.6E-8 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_27000 f1c7ada8e6f8a33b03794067277189ce 443 SUPERFAMILY SSF56935 94 443 1.5E-24 T 12-10-2018 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 Gene3D G3DSA:1.10.520.10 424 522 5.7E-31 T 12-10-2018 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00458 Haem peroxidase superfamily signature 311 326 1.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00458 Haem peroxidase superfamily signature 252 267 1.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 SUPERFAMILY SSF48113 428 522 1.92E-22 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 Pfam PF00141 Peroxidase 80 389 1.3E-48 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 Pfam PF00141 Peroxidase 395 522 8.0E-9 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.4E-50 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 472 498 6.4E-50 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.4E-50 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 260 283 6.4E-50 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.4E-50 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 Gene3D G3DSA:1.10.420.20 191 390 6.0E-207 T 12-10-2018 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 Gene3D G3DSA:1.10.520.10 21 423 6.0E-207 T 12-10-2018 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 21 522 3.5E-258 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABD1_03810 084bb137deeebe83cc9af874ba9e1b49 522 SUPERFAMILY SSF48113 23 422 2.95E-137 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABD1_16290 8bb42dd439b098ae9770a053ed1d9a5b 457 SUPERFAMILY SSF56112 103 319 6.24E-11 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_16290 8bb42dd439b098ae9770a053ed1d9a5b 457 Pfam PF03109 ABC1 family 128 232 4.3E-26 T 12-10-2018 IPR004147 UbiB domain ABD1_23270 4d418879b80652aa0506a1b17d47c3ae 448 Pfam PF07690 Major Facilitator Superfamily 32 360 5.9E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_23270 4d418879b80652aa0506a1b17d47c3ae 448 SUPERFAMILY SSF103473 15 433 7.59E-55 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_23270 4d418879b80652aa0506a1b17d47c3ae 448 Gene3D G3DSA:1.20.1250.20 16 211 6.2E-39 T 12-10-2018 ABD1_23270 4d418879b80652aa0506a1b17d47c3ae 448 Gene3D G3DSA:1.20.1250.20 231 439 1.8E-31 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.261 126 291 1.6E-73 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 PIRSF PIRSF001553 1 293 2.4E-129 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF02629 CoA binding domain 6 99 2.3E-30 T 12-10-2018 IPR003781 CoA-binding GO:0048037 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 2.1E-137 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.720 1 125 7.0E-49 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 42.989 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 2.9E-36 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 2.9E-36 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 2.9E-36 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.9E-36 T 12-10-2018 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 SMART SM00881 4 100 2.9E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF51735 1 124 3.15E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF00549 CoA-ligase 153 271 4.4E-18 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_26490 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF52210 125 289 1.44E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABD1_04870 060fa7dbf90769b44e68e9166c957feb 142 Pfam PF13279 Thioesterase-like superfamily 11 114 7.6E-8 T 12-10-2018 ABD1_04870 060fa7dbf90769b44e68e9166c957feb 142 PIRSF PIRSF003230 2 135 7.6E-20 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABD1_04870 060fa7dbf90769b44e68e9166c957feb 142 Gene3D G3DSA:3.10.129.10 4 135 7.0E-24 T 12-10-2018 ABD1_04870 060fa7dbf90769b44e68e9166c957feb 142 SUPERFAMILY SSF54637 7 137 9.4E-31 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 392 1.5E-39 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.6E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 Gene3D G3DSA:2.40.110.10 130 247 2.2E-36 T 12-10-2018 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 SUPERFAMILY SSF56645 6 254 2.09E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 Gene3D G3DSA:1.20.140.10 248 398 3.5E-31 T 12-10-2018 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 Gene3D G3DSA:1.10.540.10 1 128 3.8E-5 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_16270 adcd3b1087fa9c894f99d791e9802656 401 SUPERFAMILY SSF47203 241 395 1.93E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 Gene3D G3DSA:1.10.101.10 351 424 8.0E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 Pfam PF01471 Putative peptidoglycan binding domain 365 419 1.0E-10 T 12-10-2018 IPR002477 Peptidoglycan binding-like ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 Gene3D G3DSA:1.10.530.10 91 343 1.1E-80 T 12-10-2018 ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 SUPERFAMILY SSF53955 45 351 4.31E-96 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 Pfam PF13406 Transglycosylase SLT domain 49 344 4.9E-104 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 SUPERFAMILY SSF47090 351 422 1.43E-16 T 12-10-2018 IPR036365 PGBD-like superfamily ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 Gene3D G3DSA:1.10.8.350 64 224 1.1E-80 T 12-10-2018 ABD1_33770 7deda30589b5b4a98ce02f48e4a4e2d4 430 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 48 347 4.8E-109 T 12-10-2018 IPR011970 Lytic murein transglycosylase ABD1_32280 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.420.40 11 375 2.2E-83 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 PIRSF PIRSF003101 1 420 1.4E-101 T 12-10-2018 IPR020823 Cell division protein FtsA ABD1_32280 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.420.40 198 351 2.2E-83 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 380 3.9E-90 T 12-10-2018 IPR020823 Cell division protein FtsA ABD1_32280 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.90.640.10 236 299 2.2E-83 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 SMART SM00842 8 197 1.8E-61 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABD1_32280 140d7311c30006b5938e31205e422df3 420 Pfam PF14450 Cell division protein FtsA 208 377 9.4E-19 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 Pfam PF14450 Cell division protein FtsA 9 172 9.2E-9 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 1.1E-6 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABD1_32280 140d7311c30006b5938e31205e422df3 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.18 T 12-10-2018 IPR020823 Cell division protein FtsA ABD1_32280 140d7311c30006b5938e31205e422df3 420 SUPERFAMILY SSF53067 199 380 8.84E-35 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.1490.110 83 170 2.2E-83 T 12-10-2018 ABD1_32280 140d7311c30006b5938e31205e422df3 420 SUPERFAMILY SSF53067 8 198 1.44E-36 T 12-10-2018 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 Gene3D G3DSA:2.40.30.170 11 244 4.9E-74 T 12-10-2018 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 Gene3D G3DSA:1.10.287.470 57 122 4.9E-74 T 12-10-2018 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 15 232 1.6E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 6 316 3.8E-68 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 Gene3D G3DSA:2.40.50.100 23 169 4.9E-74 T 12-10-2018 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 Gene3D G3DSA:2.40.420.20 245 315 4.9E-74 T 12-10-2018 ABD1_33510 7fe05f66286aae149d87aa3d4b363a03 331 SUPERFAMILY SSF111369 13 238 8.24E-21 T 12-10-2018 ABD1_16120 d2817c721fbb5a097868ea4f6f5386c7 144 PIRSF PIRSF000714 1 138 2.8E-47 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type ABD1_16120 d2817c721fbb5a097868ea4f6f5386c7 144 SUPERFAMILY SSF54197 1 131 4.68E-30 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_16120 d2817c721fbb5a097868ea4f6f5386c7 144 Pfam PF01230 HIT domain 10 98 4.5E-12 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_16120 d2817c721fbb5a097868ea4f6f5386c7 144 Gene3D G3DSA:3.30.428.10 1 136 1.2E-37 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 SUPERFAMILY SSF52467 159 348 2.58E-33 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 323 1.0E-25 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Gene3D G3DSA:3.40.50.1220 186 351 1.1E-32 T 12-10-2018 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 SUPERFAMILY SSF52518 2 178 4.71E-40 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 5.8E-44 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 SUPERFAMILY SSF52518 362 530 1.75E-44 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Gene3D G3DSA:3.40.50.970 1 179 4.6E-44 T 12-10-2018 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Gene3D G3DSA:3.40.50.970 352 535 1.2E-45 T 12-10-2018 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABD1_09100 8a9d3d6a9e5dcfd1b00fc12cca7d2bac 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 526 1.3E-30 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 2.4E-40 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 2.1E-128 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Gene3D G3DSA:3.30.1490.20 136 200 1.6E-108 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 SUPERFAMILY SSF52440 1 121 2.01E-40 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 SUPERFAMILY SSF56059 122 309 1.81E-55 T 12-10-2018 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 158.743 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Gene3D G3DSA:3.30.470.20 114 294 1.6E-108 T 12-10-2018 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Gene3D G3DSA:3.40.50.20 6 113 1.6E-108 T 12-10-2018 ABD1_32330 4e6d146853bfb924cc5d4f2147b4d865 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 1.5E-75 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 Gene3D G3DSA:3.40.50.1220 184 310 8.2E-54 T 12-10-2018 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 4.3E-34 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 SUPERFAMILY SSF52402 2 185 2.23E-57 T 12-10-2018 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 Gene3D G3DSA:3.40.50.620 2 183 1.8E-54 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 SMART SM00893 3 182 8.0E-53 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 SUPERFAMILY SSF52467 189 309 9.06E-45 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 PIRSF PIRSF000089 1 310 6.3E-102 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ABD1_25800 ee7716acf5a50254ee9c4d3b0f3a0928 310 Pfam PF01012 Electron transfer flavoprotein domain 4 167 1.5E-39 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 SUPERFAMILY SSF56024 61 218 5.38E-37 T 12-10-2018 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 Gene3D G3DSA:3.30.870.10 235 467 7.1E-33 T 12-10-2018 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 Pfam PF13091 PLD-like domain 303 451 8.4E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 Pfam PF13091 PLD-like domain 64 212 3.0E-17 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 Gene3D G3DSA:3.30.870.10 44 234 3.4E-37 T 12-10-2018 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 SUPERFAMILY SSF56024 261 460 1.88E-26 T 12-10-2018 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 SMART SM00155 153 180 0.024 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABD1_17600 1838d4d4e3f5bf2d2e04891aafb30195 508 SMART SM00155 399 425 3.7E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABD1_09900 80936870a9bf38f268237904223a97f9 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 186 6.4E-41 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABD1_09900 80936870a9bf38f268237904223a97f9 194 Gene3D G3DSA:3.40.50.10420 5 194 2.5E-45 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABD1_09900 80936870a9bf38f268237904223a97f9 194 PIRSF PIRSF006806 1 189 2.0E-33 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABD1_09900 80936870a9bf38f268237904223a97f9 194 SUPERFAMILY SSF100950 6 193 1.4E-43 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_09900 80936870a9bf38f268237904223a97f9 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 186 9.6E-34 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABD1_01530 828a4d48f89a6cb04738c463c0337430 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.5E-35 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABD1_01530 828a4d48f89a6cb04738c463c0337430 156 SUPERFAMILY SSF81573 62 121 5.1E-12 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ABD1_01530 828a4d48f89a6cb04738c463c0337430 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.2 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABD1_01530 828a4d48f89a6cb04738c463c0337430 156 Gene3D G3DSA:1.20.5.620 62 122 3.1E-13 T 12-10-2018 ABD1_01530 828a4d48f89a6cb04738c463c0337430 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.3E-45 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 Pfam PF02321 Outer membrane efflux protein 75 267 9.8E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 Pfam PF02321 Outer membrane efflux protein 291 478 8.8E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 SUPERFAMILY SSF56954 8 481 6.8E-108 T 12-10-2018 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 480 9.1E-124 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 Gene3D G3DSA:1.20.1600.10 65 481 1.1E-131 T 12-10-2018 ABD1_23050 7a0c732002e72d1e7ea0088645119216 483 Gene3D G3DSA:2.20.200.10 112 369 1.1E-131 T 12-10-2018 ABD1_30310 a96ea467aaa68abc4775a6c792bfecfe 716 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 707 1.1E-198 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK ABD1_30310 a96ea467aaa68abc4775a6c792bfecfe 716 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 708 1.6E-203 T 12-10-2018 IPR010019 Integral membrane protein, YccS ABD1_30310 a96ea467aaa68abc4775a6c792bfecfe 716 Pfam PF13515 Fusaric acid resistance protein-like 409 530 1.4E-22 T 12-10-2018 ABD1_30310 a96ea467aaa68abc4775a6c792bfecfe 716 Pfam PF12805 FUSC-like inner membrane protein yccS 68 346 2.4E-86 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal ABD1_02390 4776ae3737e6ff8fde6013a5068f64ba 443 Gene3D G3DSA:1.20.1600.10 17 443 7.4E-99 T 12-10-2018 ABD1_02390 4776ae3737e6ff8fde6013a5068f64ba 443 Pfam PF02321 Outer membrane efflux protein 240 426 4.9E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_02390 4776ae3737e6ff8fde6013a5068f64ba 443 Pfam PF02321 Outer membrane efflux protein 20 217 2.3E-22 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_02390 4776ae3737e6ff8fde6013a5068f64ba 443 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 15 440 2.4E-79 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 ABD1_02390 4776ae3737e6ff8fde6013a5068f64ba 443 SUPERFAMILY SSF56954 16 440 6.28E-86 T 12-10-2018 ABD1_07640 d42d29a740c3ad2dcfe8b6a1dbe0db18 249 Pfam PF13489 Methyltransferase domain 25 180 6.6E-14 T 12-10-2018 ABD1_07640 d42d29a740c3ad2dcfe8b6a1dbe0db18 249 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 3 247 29.927 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 ABD1_07640 d42d29a740c3ad2dcfe8b6a1dbe0db18 249 SUPERFAMILY SSF53335 10 182 1.03E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_07640 d42d29a740c3ad2dcfe8b6a1dbe0db18 249 Gene3D G3DSA:3.40.50.150 33 248 2.0E-26 T 12-10-2018 ABD1_07640 d42d29a740c3ad2dcfe8b6a1dbe0db18 249 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 11 247 6.6E-68 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 Gene3D G3DSA:1.10.10.60 225 332 3.6E-23 T 12-10-2018 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 Pfam PF12833 Helix-turn-helix domain 253 329 1.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 SMART SM00342 246 328 4.5E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 203 2.1E-37 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_06800 29de3666b1e9ef08b99cb30c7fd8e58a 335 SUPERFAMILY SSF46689 282 331 4.17E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 SUPERFAMILY SSF46785 1 86 4.09E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 SUPERFAMILY SSF53850 88 290 2.41E-30 T 12-10-2018 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 Pfam PF03466 LysR substrate binding domain 87 283 2.8E-34 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 Gene3D G3DSA:1.10.10.10 1 90 1.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 Gene3D G3DSA:3.40.190.10 91 288 7.3E-53 T 12-10-2018 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-25 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 Gene3D G3DSA:3.40.190.10 164 271 7.3E-53 T 12-10-2018 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_31600 36afa26f1eed9c9fd1461e066440738d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.1E-26 T 12-10-2018 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 SUPERFAMILY SSF118215 29 442 2.62E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 Gene3D G3DSA:1.10.3860.10 19 461 2.8E-108 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_24600 4d353827378c5e463e5878b14bb655e1 464 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 9.8E-104 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Gene3D G3DSA:1.10.3090.10 122 411 4.2E-46 T 12-10-2018 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 53.019 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Gene3D G3DSA:3.30.460.10 1 121 1.1E-30 T 12-10-2018 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.838 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 SUPERFAMILY SSF81891 120 400 3.14E-55 T 12-10-2018 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 SUPERFAMILY SSF81301 1 119 5.23E-32 T 12-10-2018 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Pfam PF01743 Poly A polymerase head domain 3 122 2.0E-20 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 PIRSF PIRSF000813 1 407 3.9E-191 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ABD1_23400 806cea6015a92e91e4524c98eb63abfc 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.0E-17 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABD1_28430 9fd6e12a0a1b009ec7245dd2fb41c2ce 344 Pfam PF00534 Glycosyl transferases group 1 166 311 1.6E-24 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 ABD1_28430 9fd6e12a0a1b009ec7245dd2fb41c2ce 344 Gene3D G3DSA:3.40.50.2000 158 322 3.1E-32 T 12-10-2018 ABD1_28430 9fd6e12a0a1b009ec7245dd2fb41c2ce 344 SUPERFAMILY SSF53756 1 342 3.35E-61 T 12-10-2018 ABD1_28430 9fd6e12a0a1b009ec7245dd2fb41c2ce 344 Gene3D G3DSA:3.40.50.2000 1 157 1.7E-24 T 12-10-2018 ABD1_28430 9fd6e12a0a1b009ec7245dd2fb41c2ce 344 Pfam PF13439 Glycosyltransferase Family 4 13 147 5.1E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 8.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 Pfam PF03466 LysR substrate binding domain 95 298 3.5E-36 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 SUPERFAMILY SSF46785 11 118 5.44E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 SUPERFAMILY SSF53850 94 302 1.69E-41 T 12-10-2018 ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 Gene3D G3DSA:1.10.10.10 9 95 9.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13680 4d4ab7490ed71c5b90512533f14c80d3 313 Gene3D G3DSA:3.40.190.290 97 300 3.4E-57 T 12-10-2018 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:1.20.140.10 252 406 3.1E-34 T 12-10-2018 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:1.10.540.10 1 135 9.1E-52 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 SUPERFAMILY SSF56645 5 264 1.01E-63 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 132 3.4E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 2.8E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 3.5E-31 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:2.40.110.10 136 251 8.0E-42 T 12-10-2018 ABD1_18940 47eb2aeaf7b964faeb2173b41b87640d 413 SUPERFAMILY SSF47203 250 404 5.96E-39 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_13350 2259e1ff40eb48507277b89214e7146d 310 Gene3D G3DSA:3.10.310.10 134 286 5.6E-109 T 12-10-2018 ABD1_13350 2259e1ff40eb48507277b89214e7146d 310 SUPERFAMILY SSF54506 2 308 2.54E-96 T 12-10-2018 ABD1_13350 2259e1ff40eb48507277b89214e7146d 310 PIRSF PIRSF029792 1 310 4.8E-96 T 12-10-2018 IPR008794 Proline racemase family ABD1_13350 2259e1ff40eb48507277b89214e7146d 310 Pfam PF05544 Proline racemase 6 308 2.6E-99 T 12-10-2018 IPR008794 Proline racemase family ABD1_13350 2259e1ff40eb48507277b89214e7146d 310 Gene3D G3DSA:3.10.310.10 6 304 5.6E-109 T 12-10-2018 ABD1_16830 db2bd1d1b469e9e299e9cdf8966997e6 283 SMART SM00382 30 188 5.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_16830 db2bd1d1b469e9e299e9cdf8966997e6 283 SUPERFAMILY SSF52540 16 259 6.79E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16830 db2bd1d1b469e9e299e9cdf8966997e6 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 181 6.2E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_16830 db2bd1d1b469e9e299e9cdf8966997e6 283 Gene3D G3DSA:3.40.50.300 7 213 1.6E-27 T 12-10-2018 ABD1_11980 12dccce8ed45d841b826ffbeac4384ff 162 Pfam PF02464 Competence-damaged protein 3 145 3.6E-21 T 12-10-2018 IPR008136 CinA, C-terminal ABD1_11980 12dccce8ed45d841b826ffbeac4384ff 162 SUPERFAMILY SSF142433 2 151 1.7E-25 T 12-10-2018 IPR036653 CinA-like, C-terminal ABD1_11980 12dccce8ed45d841b826ffbeac4384ff 162 Gene3D G3DSA:3.90.950.20 1 158 3.0E-28 T 12-10-2018 IPR036653 CinA-like, C-terminal ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 Pfam PF00106 short chain dehydrogenase 8 201 1.7E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 SUPERFAMILY SSF51735 6 261 5.32E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09070 3e8e67b5fc5b3fe2e90379cc4aeaf191 264 Gene3D G3DSA:3.40.50.720 1 263 1.8E-66 T 12-10-2018 ABD1_04680 91edea8f67a6d573c7cadc79d82f07da 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.2E-31 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 ABD1_04680 91edea8f67a6d573c7cadc79d82f07da 66 PIRSF PIRSF039003 3 66 2.5E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 ABD1_04680 91edea8f67a6d573c7cadc79d82f07da 66 Gene3D G3DSA:1.10.10.600 1 66 2.6E-28 T 12-10-2018 IPR036762 IscX-like superfamily ABD1_04680 91edea8f67a6d573c7cadc79d82f07da 66 SUPERFAMILY SSF140319 3 64 1.1E-26 T 12-10-2018 IPR036762 IscX-like superfamily ABD1_04680 91edea8f67a6d573c7cadc79d82f07da 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 9.5E-32 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 ABD1_14290 842743d83d4ba57a60f531354fc7f335 139 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 122 1.8E-50 T 12-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 ABD1_14290 842743d83d4ba57a60f531354fc7f335 139 Pfam PF03817 Malonate transporter MadL subunit 1 117 3.4E-48 T 12-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 SUPERFAMILY SSF100950 8 212 5.68E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 3.6E-89 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 Pfam PF01144 Coenzyme A transferase 9 204 4.4E-37 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 Gene3D G3DSA:3.40.1080.10 4 215 1.1E-85 T 12-10-2018 ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ABD1_18710 1c487784f7e9971667fc118dbf38d269 216 SMART SM00882 9 206 1.7E-64 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_04430 7f11f5d5e395f458b7388ade1aca4320 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 2.3E-79 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ABD1_04430 7f11f5d5e395f458b7388ade1aca4320 197 SUPERFAMILY SSF53335 9 171 2.41E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_04430 7f11f5d5e395f458b7388ade1aca4320 197 Gene3D G3DSA:3.40.50.150 2 173 1.6E-26 T 12-10-2018 ABD1_04430 7f11f5d5e395f458b7388ade1aca4320 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 9.0E-76 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ABD1_26570 9621e0269029323a87b670bd101f5e3c 120 PIRSF PIRSF000178 8 119 3.2E-20 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26570 9621e0269029323a87b670bd101f5e3c 120 SUPERFAMILY SSF81343 14 118 1.57E-22 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26570 9621e0269029323a87b670bd101f5e3c 120 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 13 113 4.0E-22 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26570 9621e0269029323a87b670bd101f5e3c 120 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 12 117 1.3E-29 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_26570 9621e0269029323a87b670bd101f5e3c 120 Gene3D G3DSA:1.20.1300.10 5 119 6.2E-30 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_16480 7b01597e88b5269ec9887764aaf1de8b 522 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 129 488 3.9E-10 T 12-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 ABD1_16480 7b01597e88b5269ec9887764aaf1de8b 522 SUPERFAMILY SSF53254 32 502 5.05E-47 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_16650 ee90d7a959378be8a2a102971b180136 137 SUPERFAMILY SSF54197 1 137 2.78E-39 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_16650 ee90d7a959378be8a2a102971b180136 137 Gene3D G3DSA:3.30.428.10 1 137 1.2E-37 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_16650 ee90d7a959378be8a2a102971b180136 137 Pfam PF01230 HIT domain 15 109 3.6E-26 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_16650 ee90d7a959378be8a2a102971b180136 137 PRINTS PR00332 Histidine triad family signature 29 47 7.0E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_16650 ee90d7a959378be8a2a102971b180136 137 PRINTS PR00332 Histidine triad family signature 96 106 7.0E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_16650 ee90d7a959378be8a2a102971b180136 137 PRINTS PR00332 Histidine triad family signature 8 24 7.0E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_16400 a4a0efa2f3f738479a72a618357dfd06 507 Pfam PF03929 PepSY-associated TM region 10 364 7.7E-56 T 12-10-2018 IPR005625 PepSY-associated TM protein ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.50.50.60 105 403 9.1E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.50.50.60 1 78 3.7E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.30.9.10 134 361 9.1E-54 T 12-10-2018 ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Pfam PF01266 FAD dependent oxidoreductase 2 396 1.1E-73 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 SUPERFAMILY SSF51905 1 416 7.77E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 SUPERFAMILY SSF54373 270 359 2.88E-17 T 12-10-2018 ABD1_00970 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 48.179 T 12-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.307 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 Pfam PF01192 RNA polymerase Rpb6 8 59 4.8E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 Gene3D G3DSA:3.90.940.10 1 84 1.8E-27 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 7.7E-22 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 SUPERFAMILY SSF63562 1 70 1.34E-25 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABD1_30590 b6d071eb737a56f888b6715b22e46c07 92 SMART SM01409 8 61 4.3E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 Gene3D G3DSA:3.30.70.920 54 137 3.7E-20 T 12-10-2018 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.8E-20 T 12-10-2018 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.7E-18 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_13930 1015937a7cd78f41a941700f075810ac 151 SUPERFAMILY SSF54909 61 150 2.41E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_13930 1015937a7cd78f41a941700f075810ac 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.3E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.3E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.3E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 Gene3D G3DSA:1.10.10.10 2 52 5.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13930 1015937a7cd78f41a941700f075810ac 151 SMART SM00344 1 110 7.8E-47 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_13930 1015937a7cd78f41a941700f075810ac 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABD1_13930 1015937a7cd78f41a941700f075810ac 151 SUPERFAMILY SSF46785 1 61 1.7E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_08340 1da2001e031250a15798606714943651 302 SUPERFAMILY SSF53633 9 296 2.75E-93 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_08340 1da2001e031250a15798606714943651 302 Gene3D G3DSA:3.40.1160.10 7 299 3.3E-99 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_08340 1da2001e031250a15798606714943651 302 PIRSF PIRSF000728 13 296 3.3E-109 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_08340 1da2001e031250a15798606714943651 302 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 271 2.3E-80 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_08340 1da2001e031250a15798606714943651 302 Pfam PF00696 Amino acid kinase family 28 273 1.3E-45 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABD1_08340 1da2001e031250a15798606714943651 302 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 289 50.48 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_19070 b2e2ac592395c5a60b10256c78f01aa6 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.5E-51 T 12-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 ABD1_19070 b2e2ac592395c5a60b10256c78f01aa6 137 Gene3D G3DSA:1.20.1290.10 4 125 1.1E-41 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_19070 b2e2ac592395c5a60b10256c78f01aa6 137 SUPERFAMILY SSF69118 3 131 1.83E-38 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_19070 b2e2ac592395c5a60b10256c78f01aa6 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 119 1.5E-24 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABD1_05610 32a5716e39c1931a7d657aa7a6cb1239 345 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 33 189 2.1E-37 T 12-10-2018 IPR017482 Putative phage-type endonuclease ABD1_05610 32a5716e39c1931a7d657aa7a6cb1239 345 Pfam PF09588 YqaJ-like viral recombinase domain 38 179 6.0E-34 T 12-10-2018 IPR019080 YqaJ viral recombinase ABD1_05610 32a5716e39c1931a7d657aa7a6cb1239 345 Gene3D G3DSA:3.90.320.10 35 241 1.3E-34 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABD1_05610 32a5716e39c1931a7d657aa7a6cb1239 345 SUPERFAMILY SSF52980 37 222 1.39E-30 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Pfam PF00158 Sigma-54 interaction domain 128 295 1.6E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Gene3D G3DSA:1.10.10.60 373 466 2.0E-23 T 12-10-2018 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Pfam PF00072 Response regulator receiver domain 2 101 6.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 4.4E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 4.4E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 SUPERFAMILY SSF52172 1 173 3.84E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 1 463 1.4E-219 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 SUPERFAMILY SSF52540 127 371 6.51E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 SUPERFAMILY SSF46689 392 466 5.38E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Gene3D G3DSA:3.40.50.300 113 299 1.4E-67 T 12-10-2018 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Gene3D G3DSA:1.10.8.60 301 372 3.4E-18 T 12-10-2018 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 SMART SM00448 1 101 4.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 SMART SM00382 148 291 1.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Pfam PF02954 Bacterial regulatory protein, Fis family 425 463 3.7E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_20040 136fbf3d342dff337b2b3f42a17234c9 483 Gene3D G3DSA:3.40.50.2300 1 110 6.4E-34 T 12-10-2018 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 Pfam PF01926 50S ribosome-binding GTPase 42 156 2.6E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 40 202 7.8E-33 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 SUPERFAMILY SSF54814 214 340 4.36E-38 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 TIGRFAM TIGR00436 era: GTP-binding protein Era 40 322 1.1E-94 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 Hamap MF_00367 GTPase Era [era]. 37 339 36.049 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 Pfam PF07650 KH domain 263 327 5.9E-15 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 62 2.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 128 2.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 Gene3D G3DSA:3.40.50.300 36 214 4.5E-50 T 12-10-2018 ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 SUPERFAMILY SSF52540 42 236 9.88E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25050 8a1eaec365a4d8a9c692e09f171e7e81 342 Gene3D G3DSA:3.30.300.20 217 341 4.7E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Pfam PF09317 Domain of unknown function (DUF1974) 520 804 1.2E-96 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 SUPERFAMILY SSF56645 128 361 1.83E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Gene3D G3DSA:1.20.140.10 366 512 8.4E-93 T 12-10-2018 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 132 238 1.5E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 366 507 1.5E-12 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Gene3D G3DSA:2.40.110.10 241 365 8.4E-93 T 12-10-2018 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 SUPERFAMILY SSF47203 366 517 4.04E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_23320 8ee3ea5be6c8ce05cbcb7fe19b53db9a 821 Gene3D G3DSA:1.10.540.10 127 240 8.4E-93 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 Gene3D G3DSA:1.20.140.10 298 426 3.3E-35 T 12-10-2018 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 SUPERFAMILY SSF47203 299 424 1.05E-35 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 Gene3D G3DSA:1.10.540.10 67 191 8.1E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 SUPERFAMILY SSF56645 74 284 1.83E-30 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 189 3.0E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 424 9.6E-29 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_16280 4f53ab5a217af0078905a55f774692ed 430 Gene3D G3DSA:2.40.110.10 211 297 1.5E-9 T 12-10-2018 ABD1_27940 79eefa421b7bb38062c1a45564ec714a 417 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 417 2.2E-85 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 ABD1_27940 79eefa421b7bb38062c1a45564ec714a 417 Gene3D G3DSA:2.40.160.180 30 417 3.4E-124 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 562 7.8E-152 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 SUPERFAMILY SSF64182 52 449 3.92E-111 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 Pfam PF02272 DHHA1 domain 314 443 2.4E-26 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 Gene3D G3DSA:3.90.1640.30 46 318 2.4E-87 T 12-10-2018 ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 Pfam PF01368 DHH family 71 204 5.0E-10 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABD1_32130 b83015cf3ce54b6ccccf04daea000085 566 Gene3D G3DSA:3.10.310.30 319 451 5.1E-33 T 12-10-2018 ABD1_02960 25da18a33ea61bbaf6e6c0091bab6b79 184 Gene3D G3DSA:3.40.1740.10 1 184 2.5E-74 T 12-10-2018 ABD1_02960 25da18a33ea61bbaf6e6c0091bab6b79 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 1.5E-44 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 ABD1_02960 25da18a33ea61bbaf6e6c0091bab6b79 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.269 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 ABD1_02960 25da18a33ea61bbaf6e6c0091bab6b79 184 SUPERFAMILY SSF143456 5 184 2.22E-59 T 12-10-2018 ABD1_23780 6b50695efe185b70264a00fe9cc427a5 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 343 7.0E-110 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ABD1_23780 6b50695efe185b70264a00fe9cc427a5 436 SUPERFAMILY SSF51905 2 249 6.98E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23780 6b50695efe185b70264a00fe9cc427a5 436 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 5 434 3.4E-255 T 12-10-2018 IPR031043 Putative histamine N-monooxygenase ABD1_23780 6b50695efe185b70264a00fe9cc427a5 436 Gene3D G3DSA:3.50.50.60 1 430 4.8E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 499 3.6E-117 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 SUPERFAMILY SSF103473 15 312 1.06E-23 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 SUPERFAMILY SSF103473 329 494 3.14E-13 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 Gene3D G3DSA:1.20.1250.20 4 499 4.8E-142 T 12-10-2018 ABD1_23500 56c3f98abc174c462db4f6cad9460d31 513 Pfam PF00854 POT family 90 463 1.3E-64 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 Gene3D G3DSA:3.40.50.300 1 200 5.2E-38 T 12-10-2018 ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 2.1E-18 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 SUPERFAMILY SSF52540 1 215 1.33E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 SUPERFAMILY SSF52540 3 504 5.67E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 Gene3D G3DSA:3.40.50.300 220 547 1.4E-47 T 12-10-2018 ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 5.6E-138 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ABD1_02970 b792abbb38096c79d38b16f3ed875755 555 PIRSF PIRSF003128 1 551 1.2E-137 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 Pfam PF01137 RNA 3'-terminal phosphate cyclase 19 333 1.6E-75 T 12-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 11 336 33.902 T 12-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 PIRSF PIRSF005378 8 346 2.7E-96 T 12-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 Gene3D G3DSA:3.65.10.20 14 331 4.9E-110 T 12-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 Gene3D G3DSA:3.30.360.20 192 283 4.9E-110 T 12-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 SUPERFAMILY SSF52913 191 286 1.03E-16 T 12-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 12 332 3.5E-104 T 12-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 ABD1_22710 d9adf31b0eb9a9188107d88d07b8f777 348 SUPERFAMILY SSF55205 12 189 9.81E-56 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABD1_07860 eb09c4764eff0cc610ffe8cc59ca235a 192 SUPERFAMILY SSF89392 21 191 1.96E-34 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABD1_07860 eb09c4764eff0cc610ffe8cc59ca235a 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 34 191 2.8E-30 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ABD1_07860 eb09c4764eff0cc610ffe8cc59ca235a 192 Gene3D G3DSA:2.50.20.10 25 191 4.9E-35 T 12-10-2018 ABD1_07860 eb09c4764eff0cc610ffe8cc59ca235a 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 191 7.9E-39 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ABD1_26510 b16d863a66def43cff683914b683132e 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 6.2E-34 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABD1_26510 b16d863a66def43cff683914b683132e 477 SUPERFAMILY SSF55424 348 471 1.65E-37 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_26510 b16d863a66def43cff683914b683132e 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 2.6E-157 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABD1_26510 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.50.50.60 5 340 1.2E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26510 b16d863a66def43cff683914b683132e 477 SUPERFAMILY SSF51905 1 343 4.1E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-69 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.50.50.60 162 283 1.2E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_26510 b16d863a66def43cff683914b683132e 477 PIRSF PIRSF000350 1 469 8.9E-85 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABD1_26510 b16d863a66def43cff683914b683132e 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABD1_26510 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.30.390.30 352 477 1.6E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.7E-34 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.7E-34 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.7E-34 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-34 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.7E-34 T 12-10-2018 ABD1_26510 b16d863a66def43cff683914b683132e 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 3.6E-70 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 Pfam PF13353 4Fe-4S single cluster domain 16 97 1.2E-6 T 12-10-2018 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 4 363 1.6E-190 T 12-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 374 190.069 T 12-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 249 334 2.8E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 Gene3D G3DSA:3.20.20.70 11 294 2.4E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 15 26 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 SUPERFAMILY SSF102114 8 316 3.92E-77 T 12-10-2018 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 PIRSF PIRSF037420 1 355 7.2E-142 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 Pfam PF13186 Iron-sulfur cluster-binding domain 242 307 3.6E-9 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 SMART SM00729 9 212 3.2E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_17550 09fd38b3641a3a0513078d6636172ad8 384 Pfam PF04055 Radical SAM superfamily 15 170 1.2E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_15420 1d46ec888fade139b2966d1cc59f6164 146 SUPERFAMILY SSF54637 2 144 6.26E-32 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_15420 1d46ec888fade139b2966d1cc59f6164 146 Gene3D G3DSA:3.10.129.10 1 145 1.9E-40 T 12-10-2018 ABD1_15420 1d46ec888fade139b2966d1cc59f6164 146 Pfam PF01575 MaoC like domain 16 112 9.3E-14 T 12-10-2018 IPR002539 MaoC-like dehydratase domain ABD1_18320 1bbeb43a22f0fda6bbaf52c00acc41db 272 Pfam PF04909 Amidohydrolase 6 269 4.4E-24 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABD1_18320 1bbeb43a22f0fda6bbaf52c00acc41db 272 Gene3D G3DSA:3.20.20.140 3 272 1.1E-72 T 12-10-2018 ABD1_18320 1bbeb43a22f0fda6bbaf52c00acc41db 272 SUPERFAMILY SSF51556 3 269 7.71E-61 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 Pfam PF00375 Sodium:dicarboxylate symporter family 10 393 4.1E-63 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 SUPERFAMILY SSF118215 10 393 8.5E-89 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 Gene3D G3DSA:1.10.3860.10 2 398 6.2E-71 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 400 34.11 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 1.2E-14 T 12-10-2018 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 PRINTS PR00173 Glutamate-aspartate symporter signature 181 200 1.2E-14 T 12-10-2018 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.2E-14 T 12-10-2018 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 PRINTS PR00173 Glutamate-aspartate symporter signature 318 337 1.2E-14 T 12-10-2018 ABD1_15460 2b1e77f2954055d49c1833c8d904eda4 400 PRINTS PR00173 Glutamate-aspartate symporter signature 345 365 1.2E-14 T 12-10-2018 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 SUPERFAMILY SSF49354 23 156 1.87E-39 T 12-10-2018 IPR008962 PapD-like superfamily ABD1_15120 a9534038c08facc8df44db1b829115f2 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 179 240 2.6E-15 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal ABD1_15120 a9534038c08facc8df44db1b829115f2 246 Gene3D G3DSA:2.60.40.10 159 244 4.9E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_15120 a9534038c08facc8df44db1b829115f2 246 PRINTS PR00969 Pili chaperone signature 27 36 5.5E-36 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 PRINTS PR00969 Pili chaperone signature 174 189 5.5E-36 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 PRINTS PR00969 Pili chaperone signature 106 123 5.5E-36 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 PRINTS PR00969 Pili chaperone signature 76 97 5.5E-36 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 PRINTS PR00969 Pili chaperone signature 139 154 5.5E-36 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 Gene3D G3DSA:2.60.40.10 28 158 6.6E-41 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_15120 a9534038c08facc8df44db1b829115f2 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 157 7.8E-42 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ABD1_15120 a9534038c08facc8df44db1b829115f2 246 SUPERFAMILY SSF49584 159 243 2.09E-20 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ABD1_15120 a9534038c08facc8df44db1b829115f2 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 Gene3D G3DSA:1.20.81.30 261 371 8.2E-28 T 12-10-2018 ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 Gene3D G3DSA:1.20.81.30 60 176 4.6E-31 T 12-10-2018 ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 3.9E-28 T 12-10-2018 IPR018076 Type II secretion system F domain ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 1.8E-31 T 12-10-2018 IPR018076 Type II secretion system F domain ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 3.0E-18 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 3.0E-18 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 3.0E-18 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03040 3679d3402e4361ac312d99d2d803e5e9 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 3.0E-18 T 12-10-2018 IPR003004 GspF/PilC family ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 Gene3D G3DSA:3.20.20.60 1 269 1.4E-97 T 12-10-2018 ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 SUPERFAMILY SSF51621 2 265 1.22E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 PIRSF PIRSF000388 1 268 6.7E-92 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 39.41 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 4.3E-99 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABD1_05910 a6b38ffabef4894c1e9f8369f673f4a3 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 266 4.0E-96 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABD1_01010 b590eea4fcd3eb8d901bcba44a801c92 476 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_01010 b590eea4fcd3eb8d901bcba44a801c92 476 PIRSF PIRSF006060 3 475 8.7E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_01010 b590eea4fcd3eb8d901bcba44a801c92 476 Gene3D G3DSA:1.20.1740.10 14 474 2.4E-63 T 12-10-2018 ABD1_01010 b590eea4fcd3eb8d901bcba44a801c92 476 Pfam PF00324 Amino acid permease 24 468 1.1E-103 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 296 35.561 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 5.2E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 5.2E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 5.2E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 5.2E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 5.2E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 42 297 4.1E-108 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 Gene3D G3DSA:3.90.226.10 42 297 2.3E-75 T 12-10-2018 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 Pfam PF01039 Carboxyl transferase domain 107 257 4.6E-18 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABD1_28120 caf7b32eb567d24f68b392fe3e6d76df 298 SUPERFAMILY SSF52096 43 296 1.62E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_21140 fe69078060463884152f64aff15045e2 650 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site ABD1_21140 fe69078060463884152f64aff15045e2 650 Pfam PF08676 MutL C terminal dimerisation domain 458 606 3.6E-44 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ABD1_21140 fe69078060463884152f64aff15045e2 650 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 149 2.1E-11 T 12-10-2018 ABD1_21140 fe69078060463884152f64aff15045e2 650 SUPERFAMILY SSF54211 202 339 1.14E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_21140 fe69078060463884152f64aff15045e2 650 Gene3D G3DSA:3.30.230.10 226 338 9.0E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_21140 fe69078060463884152f64aff15045e2 650 Gene3D G3DSA:3.30.565.10 10 224 3.3E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_21140 fe69078060463884152f64aff15045e2 650 Gene3D G3DSA:2.30.42.20 464 643 2.5E-53 T 12-10-2018 ABD1_21140 fe69078060463884152f64aff15045e2 650 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 319 1.6E-95 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 ABD1_21140 fe69078060463884152f64aff15045e2 650 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 646 26.772 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 ABD1_21140 fe69078060463884152f64aff15045e2 650 SMART SM00853 462 606 6.1E-46 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ABD1_21140 fe69078060463884152f64aff15045e2 650 Gene3D G3DSA:3.30.1370.100 506 601 2.5E-53 T 12-10-2018 ABD1_21140 fe69078060463884152f64aff15045e2 650 SMART SM01340 221 339 7.0E-52 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ABD1_21140 fe69078060463884152f64aff15045e2 650 SUPERFAMILY SSF55874 8 211 2.1E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_21140 fe69078060463884152f64aff15045e2 650 SUPERFAMILY SSF118116 457 648 2.48E-57 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily ABD1_21140 fe69078060463884152f64aff15045e2 650 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 222 338 4.6E-36 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ABD1_21690 c36bc1b97cc442fa87380a6a91116a41 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.191 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ABD1_21690 c36bc1b97cc442fa87380a6a91116a41 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site ABD1_21690 c36bc1b97cc442fa87380a6a91116a41 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 277 8.8E-85 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ABD1_21690 c36bc1b97cc442fa87380a6a91116a41 292 Gene3D G3DSA:1.10.357.140 13 164 4.5E-21 T 12-10-2018 ABD1_21690 c36bc1b97cc442fa87380a6a91116a41 292 Pfam PF01040 UbiA prenyltransferase family 18 267 7.3E-58 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 458 68.884 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 Gene3D G3DSA:3.40.1350.30 144 287 3.7E-111 T 12-10-2018 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 Gene3D G3DSA:3.40.50.150 97 452 3.7E-111 T 12-10-2018 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 389 419 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 42 450 5.8E-98 T 12-10-2018 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 Gene3D G3DSA:2.40.50.140 2 96 6.8E-19 T 12-10-2018 ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 SUPERFAMILY SSF50249 8 75 1.26E-8 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 SUPERFAMILY SSF53335 85 457 1.4E-82 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_05840 0c37d44dd00fc30651466c8b4a008ae3 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 108 457 6.1E-31 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 SUPERFAMILY SSF55073 209 361 1.1E-41 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 357 8.8E-40 T 12-10-2018 IPR000160 GGDEF domain ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 SMART SM00267 193 362 3.1E-53 T 12-10-2018 IPR000160 GGDEF domain ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 Gene3D G3DSA:3.30.70.270 188 362 7.2E-51 T 12-10-2018 ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 2.2E-45 T 12-10-2018 IPR000160 GGDEF domain ABD1_28770 eb3245273f86ca6878865473d3b3ed25 366 Pfam PF17152 Periplasmic sensor domain 2 100 3.4E-17 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF03895 YadA-like membrane anchor domain 1026 1078 3.9E-8 T 12-10-2018 IPR005594 YadA-like, C-terminal ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:2.40.128.100 259 351 2.5E-7 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:1.20.5.170 825 873 1.5E-10 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:1.20.5.170 38 77 1.2E-5 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:3.30.390.90 545 580 2.4E-17 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:3.30.390.90 142 181 2.4E-17 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:3.30.390.90 722 761 1.4E-16 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:3.30.390.90 352 390 2.3E-19 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 SUPERFAMILY SSF101967 69 199 1.07E-7 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 442 479 2.6E-4 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 579 619 1.1E-4 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 825 867 5.0E-10 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 385 425 4.4E-8 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 756 786 4.3E-8 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 39 76 2.5E-4 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 176 216 2.7E-9 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 909 947 0.0051 T 12-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:1.20.5.170 902 1006 6.8E-7 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:1.20.5.170 581 669 5.1E-6 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:3.30.1300.30 1007 1080 1.7E-9 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 SUPERFAMILY SSF54523 989 1078 5.65E-17 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 Gene3D G3DSA:2.150.10.10 405 465 1.8E-5 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 SUPERFAMILY SSF101967 347 407 5.36E-10 T 12-10-2018 ABD1_09880 d36b5efd24a9fb668c49609f85e76f7f 1082 SUPERFAMILY SSF101967 741 777 1.44E-6 T 12-10-2018 ABD1_03790 01624b279df2ab1e4dd209e508f0144c 296 Pfam PF12706 Beta-lactamase superfamily domain 60 254 1.6E-35 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_03790 01624b279df2ab1e4dd209e508f0144c 296 SUPERFAMILY SSF56281 41 259 1.17E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_03790 01624b279df2ab1e4dd209e508f0144c 296 Gene3D G3DSA:3.60.15.10 8 296 1.0E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_03790 01624b279df2ab1e4dd209e508f0144c 296 PIRSF PIRSF038896 2 296 5.6E-88 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 SUPERFAMILY SSF160246 63 160 1.18E-7 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 60 162 2.4E-11 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 SUPERFAMILY SSF52540 195 582 3.25E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 SMART SM00382 335 477 0.0065 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 Pfam PF00437 Type II/IV secretion system protein 214 474 3.8E-78 T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 Gene3D G3DSA:3.40.50.300 311 583 6.2E-106 T 12-10-2018 ABD1_22890 be30e1fc3d45bb4f4316fc42d58ca711 585 Gene3D G3DSA:3.30.450.90 170 307 8.1E-42 T 12-10-2018 ABD1_26690 3262ce195bc99f213f15961d2345d7ea 461 Pfam PF00324 Amino acid permease 21 386 4.9E-38 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_26690 3262ce195bc99f213f15961d2345d7ea 461 PIRSF PIRSF006060 4 461 4.7E-63 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_26690 3262ce195bc99f213f15961d2345d7ea 461 Gene3D G3DSA:1.20.1740.10 12 458 3.1E-70 T 12-10-2018 ABD1_21000 205445d009e98782ddc520e232bf975a 322 Pfam PF12146 Serine aminopeptidase, S33 46 252 5.2E-19 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_21000 205445d009e98782ddc520e232bf975a 322 SUPERFAMILY SSF53474 19 320 1.88E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_21000 205445d009e98782ddc520e232bf975a 322 Gene3D G3DSA:3.40.50.1820 20 321 1.4E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_31180 17d6a51e9423957443ebc27a8614e3f9 243 Gene3D G3DSA:3.20.20.70 2 242 1.0E-85 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_31180 17d6a51e9423957443ebc27a8614e3f9 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.823 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABD1_31180 17d6a51e9423957443ebc27a8614e3f9 243 Pfam PF00977 Histidine biosynthesis protein 3 229 1.1E-78 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABD1_31180 17d6a51e9423957443ebc27a8614e3f9 243 SUPERFAMILY SSF51366 1 235 1.57E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_31180 17d6a51e9423957443ebc27a8614e3f9 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.1E-79 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABD1_31420 b4f6108337c41f640f2676b345cc1fc6 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 110 2.2E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_31420 b4f6108337c41f640f2676b345cc1fc6 135 Gene3D G3DSA:3.10.180.10 3 135 1.7E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_31420 b4f6108337c41f640f2676b345cc1fc6 135 SUPERFAMILY SSF54593 5 127 2.01E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_25750 d678d1491a863af2a4ed6c4ce3144915 264 Pfam PF04794 YdjC-like protein 4 250 3.2E-41 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like ABD1_25750 d678d1491a863af2a4ed6c4ce3144915 264 SUPERFAMILY SSF88713 1 261 7.34E-54 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_25750 d678d1491a863af2a4ed6c4ce3144915 264 Gene3D G3DSA:3.20.20.370 2 263 2.9E-31 T 12-10-2018 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 Gene3D G3DSA:2.40.30.170 48 297 9.0E-95 T 12-10-2018 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 SUPERFAMILY SSF111369 49 292 5.89E-71 T 12-10-2018 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 366 4.7E-76 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 Gene3D G3DSA:2.40.420.20 298 366 9.0E-95 T 12-10-2018 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 287 3.7E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 Gene3D G3DSA:2.40.50.100 59 203 9.0E-95 T 12-10-2018 ABD1_17700 5747d5810c543a579c89f510136f8a0b 396 Gene3D G3DSA:1.10.287.470 94 167 9.0E-95 T 12-10-2018 ABD1_32400 3622e0bf8d1e5c40e3caca9a5aabc67c 145 Gene3D G3DSA:2.40.128.520 23 145 4.0E-19 T 12-10-2018 ABD1_32400 3622e0bf8d1e5c40e3caca9a5aabc67c 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 1.3E-26 T 12-10-2018 IPR019223 Domain of unknown function DUF2147 ABD1_14070 0d6bb1fe6e216fb5a8776aedcb65c32a 653 Gene3D G3DSA:3.40.640.10 281 541 1.3E-165 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_14070 0d6bb1fe6e216fb5a8776aedcb65c32a 653 SUPERFAMILY SSF53383 249 648 1.51E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_14070 0d6bb1fe6e216fb5a8776aedcb65c32a 653 Gene3D G3DSA:3.90.1150.10 253 642 1.3E-165 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_14070 0d6bb1fe6e216fb5a8776aedcb65c32a 653 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 252 647 9.7E-165 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABD1_14070 0d6bb1fe6e216fb5a8776aedcb65c32a 653 Pfam PF00266 Aminotransferase class-V 270 639 3.2E-144 T 12-10-2018 IPR000192 Aminotransferase class V domain ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 SUPERFAMILY SSF53850 103 309 2.81E-35 T 12-10-2018 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:3.40.190.10 114 298 7.2E-36 T 12-10-2018 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:3.40.190.10 177 280 7.2E-36 T 12-10-2018 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 7.0E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 Pfam PF03466 LysR substrate binding domain 103 307 5.2E-31 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:1.10.10.10 12 98 2.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 SUPERFAMILY SSF46785 11 120 1.13E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 6.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 6.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18190 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 6.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 Gene3D G3DSA:3.30.230.20 1 127 4.3E-43 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.765 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 SUPERFAMILY SSF54211 3 125 5.84E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 5.6E-97 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 4.3E-111 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 SUPERFAMILY SSF54211 133 277 7.59E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_32260 98ebbb55657c0c743845c9ba22a2cf5a 300 Gene3D G3DSA:3.30.1700.10 128 300 1.1E-62 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 SUPERFAMILY SSF51905 1 360 3.97E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.5E-20 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 1.5E-20 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.5E-20 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.5E-20 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.5E-20 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 Pfam PF01494 FAD binding domain 2 339 3.0E-29 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 Gene3D G3DSA:3.30.9.30 35 269 4.5E-114 T 12-10-2018 ABD1_32520 2220b9b0d716021c911e3457a2fa7301 385 Gene3D G3DSA:3.50.50.60 4 342 4.5E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_06690 e5febc8c0b77fec077af8a81a442ebb6 409 Gene3D G3DSA:3.40.50.10540 4 397 2.7E-135 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily ABD1_06690 e5febc8c0b77fec077af8a81a442ebb6 409 Gene3D G3DSA:3.30.1540.10 242 333 2.7E-135 T 12-10-2018 ABD1_06690 e5febc8c0b77fec077af8a81a442ebb6 409 Pfam PF02515 CoA-transferase family III 4 382 4.5E-129 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 ABD1_06690 e5febc8c0b77fec077af8a81a442ebb6 409 SUPERFAMILY SSF89796 1 404 7.85E-137 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 SMART SM00849 558 754 0.0031 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 SUPERFAMILY SSF56281 547 796 2.03E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 138 783 1.6E-95 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 Pfam PF03772 Competence protein 243 522 7.7E-57 T 12-10-2018 IPR004477 ComEC/Rec2-related protein ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 264 456 5.9E-21 T 12-10-2018 IPR004477 ComEC/Rec2-related protein ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 Pfam PF00753 Metallo-beta-lactamase superfamily 555 732 1.8E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 Pfam PF13567 Domain of unknown function (DUF4131) 33 188 6.7E-10 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 ABD1_25630 4f1af50f0bf62dcaeb88c7c8a905d81f 810 Gene3D G3DSA:3.60.15.10 546 797 1.0E-58 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_24240 33b64664ede19fca99e96510dcb3339a 181 SUPERFAMILY SSF51161 5 177 3.88E-45 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_24240 33b64664ede19fca99e96510dcb3339a 181 Gene3D G3DSA:2.160.10.10 4 181 4.2E-56 T 12-10-2018 ABD1_24240 33b64664ede19fca99e96510dcb3339a 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.2E-8 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_24240 33b64664ede19fca99e96510dcb3339a 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 4.9E-5 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_09630 5f0e636cad7bb16837e7229db31a7906 159 Gene3D G3DSA:2.40.128.640 49 159 3.9E-40 T 12-10-2018 ABD1_09630 5f0e636cad7bb16837e7229db31a7906 159 Pfam PF04170 NlpE N-terminal domain 62 147 3.2E-28 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE ABD1_19240 5106ad5f6e09da99cc850a069575051f 135 Gene3D G3DSA:3.10.450.50 4 133 5.4E-44 T 12-10-2018 ABD1_19240 5106ad5f6e09da99cc850a069575051f 135 Pfam PF12680 SnoaL-like domain 11 106 1.7E-8 T 12-10-2018 IPR037401 SnoaL-like domain ABD1_19240 5106ad5f6e09da99cc850a069575051f 135 SUPERFAMILY SSF54427 8 114 1.32E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_13780 dd18cdc59ba888234df0f05e405109f2 412 Gene3D G3DSA:3.40.50.1110 164 412 1.9E-31 T 12-10-2018 IPR036514 SGNH hydrolase superfamily ABD1_13780 dd18cdc59ba888234df0f05e405109f2 412 SUPERFAMILY SSF52266 192 404 6.33E-45 T 12-10-2018 ABD1_13780 dd18cdc59ba888234df0f05e405109f2 412 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 203 398 1.8E-22 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABD1_32470 a8dcd1ba17edf283a5edc636d5bab9c8 321 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 20 318 1.4E-143 T 12-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 ABD1_32470 a8dcd1ba17edf283a5edc636d5bab9c8 321 Pfam PF01522 Polysaccharide deacetylase 88 176 8.1E-6 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABD1_32470 a8dcd1ba17edf283a5edc636d5bab9c8 321 SUPERFAMILY SSF88713 20 318 3.89E-79 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_32470 a8dcd1ba17edf283a5edc636d5bab9c8 321 Gene3D G3DSA:3.20.20.370 13 320 1.0E-94 T 12-10-2018 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 PIRSF PIRSF000103 2 288 1.1E-58 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 2.4E-22 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 Gene3D G3DSA:3.40.50.720 2 164 1.5E-41 T 12-10-2018 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 Gene3D G3DSA:1.10.1040.10 165 288 1.2E-30 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 162 1.5E-40 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 SUPERFAMILY SSF51735 8 163 1.07E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_05790 c8ca6872a883e8064b1bd0595136abfb 288 SUPERFAMILY SSF48179 163 287 1.11E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 SUPERFAMILY SSF52540 6 416 6.82E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Gene3D G3DSA:3.40.50.300 463 747 5.7E-101 T 12-10-2018 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Gene3D G3DSA:1.10.8.280 147 259 6.0E-154 T 12-10-2018 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Gene3D G3DSA:1.20.1580.10 93 337 6.0E-154 T 12-10-2018 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 SUPERFAMILY SSF52540 458 717 2.67E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Pfam PF00005 ABC transporter 468 671 4.2E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Gene3D G3DSA:1.20.1580.10 545 583 5.7E-101 T 12-10-2018 ABD1_17680 05e038278188f4d8b87361d2ab168c51 753 Gene3D G3DSA:3.40.50.300 8 437 6.0E-154 T 12-10-2018 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Gene3D G3DSA:3.40.50.300 1 217 9.4E-81 T 12-10-2018 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Hamap MF_00235 Adenylate kinase [adk]. 1 216 51.096 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 SUPERFAMILY SSF52540 1 216 8.44E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Pfam PF00406 Adenylate kinase 5 185 1.0E-54 T 12-10-2018 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-73 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.4E-32 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.4E-32 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.4E-32 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 173 187 3.4E-32 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 156 171 3.4E-32 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABD1_09780 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.3E-16 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:1.10.287.470 105 188 2.0E-10 T 12-10-2018 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Pfam PF13533 Biotin-lipoyl like 48 96 2.3E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 SUPERFAMILY SSF111369 47 249 4.45E-13 T 12-10-2018 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:2.40.50.100 49 81 4.9E-12 T 12-10-2018 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:1.10.287.470 82 104 4.9E-12 T 12-10-2018 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Pfam PF13437 HlyD family secretion protein 200 281 8.7E-12 T 12-10-2018 ABD1_02940 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:2.40.30.170 214 333 5.6E-25 T 12-10-2018 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 253 3.0E-33 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Gene3D G3DSA:3.40.50.720 2 272 4.3E-106 T 12-10-2018 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 40.581 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Gene3D G3DSA:3.30.1370.170 293 350 9.1E-12 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 269 2.3E-18 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Pfam PF11890 Domain of unknown function (DUF3410) 297 349 4.5E-13 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 Gene3D G3DSA:3.40.50.720 92 254 4.3E-106 T 12-10-2018 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 SUPERFAMILY SSF52283 16 112 5.32E-18 T 12-10-2018 ABD1_25910 da72586b050958cafebe2db2d00aaffe 355 SUPERFAMILY SSF51735 91 254 1.85E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 1.5E-26 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 SUPERFAMILY SSF55424 351 467 6.53E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.0E-51 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.8E-29 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 2.8E-29 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.8E-29 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.8E-29 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 2.8E-29 T 12-10-2018 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 PIRSF PIRSF000350 3 467 1.2E-65 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 Gene3D G3DSA:3.50.50.60 159 277 4.7E-89 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 Gene3D G3DSA:3.30.390.30 351 469 2.1E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 SUPERFAMILY SSF51905 13 343 9.07E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 1.5E-57 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_23300 2ccbdbddc1e6cecd9fb2b1b8bd0266e0 470 Gene3D G3DSA:3.50.50.60 15 337 4.7E-89 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 Pfam PF04060 Putative Fe-S cluster 15 47 1.5E-9 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 Gene3D G3DSA:3.30.70.20 66 161 1.2E-19 T 12-10-2018 ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 SUPERFAMILY SSF54862 10 142 1.88E-25 T 12-10-2018 ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 153 8.0E-56 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 Pfam PF14697 4Fe-4S dicluster domain 85 138 1.5E-15 T 12-10-2018 ABD1_09810 c9d68f4c30154a0061e60e487e1f6ab9 263 Gene3D G3DSA:3.20.20.20 7 65 2.9E-7 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 Gene3D G3DSA:3.40.50.720 3 312 7.8E-102 T 12-10-2018 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 3.4E-55 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 SUPERFAMILY SSF52283 1 132 9.45E-26 T 12-10-2018 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 SUPERFAMILY SSF51735 99 286 1.23E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 317 2.5E-25 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABD1_22440 38dd6b36709bb9478c7539502d2955b4 321 Gene3D G3DSA:3.40.50.720 96 285 7.8E-102 T 12-10-2018 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 Pfam PF00487 Fatty acid desaturase 42 270 9.1E-21 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PIRSF PIRSF000345 1 357 1.9E-95 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 39 61 9.3E-36 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 9.3E-36 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 9.3E-36 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 9.3E-36 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ABD1_28240 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 9.3E-36 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ABD1_17990 03e20182fa091971bc774d8e21eb6b55 464 Pfam PF02219 Methylenetetrahydrofolate reductase 64 255 2.0E-20 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ABD1_17990 03e20182fa091971bc774d8e21eb6b55 464 Gene3D G3DSA:3.20.20.220 29 277 1.8E-27 T 12-10-2018 ABD1_17990 03e20182fa091971bc774d8e21eb6b55 464 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 359 443 1.1E-18 T 12-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal ABD1_17990 03e20182fa091971bc774d8e21eb6b55 464 SUPERFAMILY SSF51730 1 279 2.75E-43 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like ABD1_25870 9833e3cfe1b82fe8de5d899bd931f544 492 ProSitePatterns PS00218 Amino acid permeases signature. 72 102 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_25870 9833e3cfe1b82fe8de5d899bd931f544 492 Gene3D G3DSA:1.20.1740.10 38 492 9.0E-62 T 12-10-2018 ABD1_25870 9833e3cfe1b82fe8de5d899bd931f544 492 PIRSF PIRSF006060 22 492 2.6E-67 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_25870 9833e3cfe1b82fe8de5d899bd931f544 492 Pfam PF00324 Amino acid permease 47 487 8.2E-103 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_04330 30f1640821448bde81816c04bbeb2954 259 Pfam PF05742 Transport and Golgi organisation 2 1 233 9.1E-57 T 12-10-2018 IPR008551 Transport and Golgi organisation protein 2 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 2.0E-38 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 Pfam PF00209 Sodium:neurotransmitter symporter family 126 482 8.4E-68 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 4.6E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 4.6E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 4.6E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 391 411 4.6E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 4.6E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 SUPERFAMILY SSF161070 5 485 3.66E-136 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 ABD1_33620 4a3f1d4ab8d0ba52c730e241886e6380 492 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 SUPERFAMILY SSF51735 7 250 1.62E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 8.1E-43 T 12-10-2018 ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 Gene3D G3DSA:3.40.50.720 1 251 3.1E-61 T 12-10-2018 ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_03680 7e3fd43a9634eaeb7486910713df5f3c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_23020 282d828a7fb66749d2102b54583e5710 343 SUPERFAMILY SSF46785 5 87 6.54E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_23020 282d828a7fb66749d2102b54583e5710 343 Gene3D G3DSA:1.10.10.10 4 90 1.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_23020 282d828a7fb66749d2102b54583e5710 343 Pfam PF03466 LysR substrate binding domain 88 295 4.1E-42 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_23020 282d828a7fb66749d2102b54583e5710 343 Gene3D G3DSA:3.40.190.10 91 293 3.8E-65 T 12-10-2018 ABD1_23020 282d828a7fb66749d2102b54583e5710 343 SUPERFAMILY SSF53850 89 298 2.17E-44 T 12-10-2018 ABD1_23020 282d828a7fb66749d2102b54583e5710 343 Gene3D G3DSA:3.40.190.10 163 266 3.8E-65 T 12-10-2018 ABD1_23020 282d828a7fb66749d2102b54583e5710 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_00530 4fc338214846bb4197550bd700242357 346 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 1.1E-5 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 1.1E-5 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 1.1E-5 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 PRINTS PR01713 Nucleotide sugar epimerase signature 301 318 1.1E-5 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 Gene3D G3DSA:3.90.25.10 193 334 2.4E-111 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 Gene3D G3DSA:3.40.50.720 19 322 2.4E-111 T 12-10-2018 ABD1_00530 4fc338214846bb4197550bd700242357 346 SUPERFAMILY SSF51735 1 340 1.42E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00530 4fc338214846bb4197550bd700242357 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 19 330 1.7E-55 T 12-10-2018 IPR016040 NAD(P)-binding domain ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 12-10-2018 IPR019844 Cold-shock conserved site ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 5.5E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 PIRSF PIRSF002599 1 71 5.2E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 Gene3D G3DSA:2.40.50.140 4 67 9.9E-29 T 12-10-2018 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 SMART SM00357 5 68 7.5E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 SUPERFAMILY SSF50249 4 68 6.09E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 41 59 1.5E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 26 35 1.5E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_12410 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 6 21 1.5E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Gene3D G3DSA:3.30.530.20 1 148 3.0E-22 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Pfam PF17131 Outer membrane lipoprotein-sorting protein 1028 1216 1.2E-45 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 SUPERFAMILY SSF82866 724 940 1.57E-32 T 12-10-2018 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Gene3D G3DSA:2.50.20.10 974 1216 6.8E-62 T 12-10-2018 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 8.3E-14 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 SUPERFAMILY SSF55961 1 143 9.17E-25 T 12-10-2018 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Pfam PF03176 MMPL family 254 557 6.1E-24 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Pfam PF03176 MMPL family 727 948 2.5E-15 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 SUPERFAMILY SSF82866 330 547 2.09E-28 T 12-10-2018 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Gene3D G3DSA:1.20.1640.10 760 949 5.4E-19 T 12-10-2018 ABD1_01220 cf359b3a176f92e7664be459cfa332d1 1216 Gene3D G3DSA:1.20.1640.10 368 558 1.2E-8 T 12-10-2018 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 PRINTS PR00342 Rhesus blood group protein signature 163 179 5.4E-7 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 PRINTS PR00342 Rhesus blood group protein signature 290 312 5.4E-7 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 PRINTS PR00342 Rhesus blood group protein signature 345 363 5.4E-7 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 PRINTS PR00342 Rhesus blood group protein signature 259 277 5.4E-7 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 ProSitePatterns PS01219 Ammonium transporters signature. 220 245 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 TIGRFAM TIGR00836 amt: ammonium transporter 68 462 3.8E-133 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 SUPERFAMILY SSF111352 64 446 1.44E-129 T 12-10-2018 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 Pfam PF00909 Ammonium Transporter Family 71 462 5.8E-118 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ABD1_02050 6882df7ea1846e41cf6eb4a97cd9248e 465 Gene3D G3DSA:1.10.3430.10 44 465 3.7E-140 T 12-10-2018 IPR029020 Ammonium/urea transporter ABD1_16440 defa1c53c5b4accf0063030d2e220879 208 Gene3D G3DSA:3.90.1140.10 24 190 1.8E-6 T 12-10-2018 ABD1_16440 defa1c53c5b4accf0063030d2e220879 208 Pfam PF13563 2'-5' RNA ligase superfamily 35 182 1.4E-7 T 12-10-2018 ABD1_16440 defa1c53c5b4accf0063030d2e220879 208 SUPERFAMILY SSF55144 28 177 1.33E-8 T 12-10-2018 IPR009097 Cyclic phosphodiesterase ABD1_11890 c0529815f797185d85cf04ec78719b28 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 2.0E-167 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 Gene3D G3DSA:1.10.300.10 102 202 3.1E-98 T 12-10-2018 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 202.976 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 Gene3D G3DSA:3.90.170.10 268 439 1.5E-61 T 12-10-2018 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 Gene3D G3DSA:3.40.440.10 6 250 3.1E-98 T 12-10-2018 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 SUPERFAMILY SSF52540 3 437 8.5E-167 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11890 c0529815f797185d85cf04ec78719b28 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 1.0E-169 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_11890 c0529815f797185d85cf04ec78719b28 439 SMART SM00788 4 432 4.3E-277 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 SUPERFAMILY SSF74731 3 117 1.7E-47 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-46 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.7E-47 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.1900.20 56 118 2.2E-25 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 12-10-2018 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.472 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06030 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.720.90 2 55 3.9E-24 T 12-10-2018 ABD1_20160 9a9f0c7e01fe62d5eb0c1bca02c08496 116 Gene3D G3DSA:3.40.1260.10 1 115 6.4E-14 T 12-10-2018 IPR027396 DsrEFH-like ABD1_20160 9a9f0c7e01fe62d5eb0c1bca02c08496 116 SUPERFAMILY SSF75169 2 116 2.8E-6 T 12-10-2018 IPR027396 DsrEFH-like ABD1_15660 6798f262a6fcdcfbd6f0dfc0f43015e9 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 36.528 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ABD1_15660 6798f262a6fcdcfbd6f0dfc0f43015e9 253 SUPERFAMILY SSF53448 3 246 3.67E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_15660 6798f262a6fcdcfbd6f0dfc0f43015e9 253 Pfam PF02348 Cytidylyltransferase 4 222 2.7E-49 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ABD1_15660 6798f262a6fcdcfbd6f0dfc0f43015e9 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 8.5E-79 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ABD1_15660 6798f262a6fcdcfbd6f0dfc0f43015e9 253 Gene3D G3DSA:3.90.550.10 1 253 1.5E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.9E-36 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 Gene3D G3DSA:4.10.520.10 1 90 5.4E-39 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 SMART SM00411 1 90 1.3E-47 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.3E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.3E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.3E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ABD1_16230 94ba72ee0b3b30658dd6ec86f643e8ef 90 SUPERFAMILY SSF47729 1 89 2.06E-34 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Gene3D G3DSA:3.90.226.10 1 314 9.5E-96 T 12-10-2018 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 717 52.169 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Gene3D G3DSA:1.10.1040.50 499 711 5.2E-79 T 12-10-2018 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 SUPERFAMILY SSF52096 6 308 1.09E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 SUPERFAMILY SSF48179 497 642 4.76E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 2.7E-62 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Gene3D G3DSA:3.40.50.720 315 498 1.5E-67 T 12-10-2018 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 231 1.0E-36 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 SUPERFAMILY SSF51735 314 497 5.39E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 SUPERFAMILY SSF48179 626 716 3.4E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABD1_02830 8ef28a8e23efeb11b4d490a630e0cf7d 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 2.3E-24 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_06750 e2e1236b9b90f781df2c85ee551f53ef 264 Gene3D G3DSA:3.40.190.10 34 258 4.1E-24 T 12-10-2018 ABD1_06750 e2e1236b9b90f781df2c85ee551f53ef 264 SUPERFAMILY SSF53850 25 259 2.12E-34 T 12-10-2018 ABD1_06750 e2e1236b9b90f781df2c85ee551f53ef 264 Gene3D G3DSA:3.40.190.10 109 222 4.1E-24 T 12-10-2018 ABD1_06750 e2e1236b9b90f781df2c85ee551f53ef 264 Pfam PF13531 Bacterial extracellular solute-binding protein 27 259 2.7E-27 T 12-10-2018 ABD1_26470 be2c26f7fa80881ed7c0e68755fc7ad1 307 Pfam PF05661 Protein of unknown function (DUF808) 3 294 3.0E-117 T 12-10-2018 IPR008526 Inner membrane protein YedI ABD1_26470 be2c26f7fa80881ed7c0e68755fc7ad1 307 PIRSF PIRSF016660 1 306 7.0E-131 T 12-10-2018 IPR008526 Inner membrane protein YedI ABD1_28390 44e391dbe22f7f45847c5ce1d2bdbfdb 257 SUPERFAMILY SSF53448 1 227 4.64E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_28390 44e391dbe22f7f45847c5ce1d2bdbfdb 257 Gene3D G3DSA:3.90.550.20 1 254 1.6E-35 T 12-10-2018 ABD1_28390 44e391dbe22f7f45847c5ce1d2bdbfdb 257 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 17 99 2.3E-12 T 12-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif ABD1_02060 18fd3d38a6f299a93d365f5a6253e49b 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 80.808 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ABD1_02060 18fd3d38a6f299a93d365f5a6253e49b 152 Pfam PF03477 ATP cone domain 50 136 5.8E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABD1_02060 18fd3d38a6f299a93d365f5a6253e49b 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 6.4E-60 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 SUPERFAMILY SSF46689 185 235 3.05E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 Gene3D G3DSA:1.10.10.60 235 284 1.5E-17 T 12-10-2018 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 SUPERFAMILY SSF46689 237 284 5.82E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 Pfam PF12833 Helix-turn-helix domain 207 284 2.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 SMART SM00342 201 284 1.2E-33 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17050 78d62991de39d0a116855c44e6e40243 284 Gene3D G3DSA:1.10.10.60 184 234 6.7E-15 T 12-10-2018 ABD1_17870 e864365712cf4fc58fc1e0f07588983e 387 SUPERFAMILY SSF55729 8 141 1.47E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_17870 e864365712cf4fc58fc1e0f07588983e 387 Gene3D G3DSA:3.40.630.30 6 143 3.2E-5 T 12-10-2018 ABD1_19390 d985e25c5f4312fc3242982f6e6cd7e9 216 SUPERFAMILY SSF51735 3 133 7.28E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_19390 d985e25c5f4312fc3242982f6e6cd7e9 216 Gene3D G3DSA:3.30.70.1450 138 213 3.2E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABD1_19390 d985e25c5f4312fc3242982f6e6cd7e9 216 Gene3D G3DSA:3.40.50.720 2 137 2.2E-35 T 12-10-2018 ABD1_19390 d985e25c5f4312fc3242982f6e6cd7e9 216 Pfam PF02254 TrkA-N domain 4 119 7.7E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABD1_19390 d985e25c5f4312fc3242982f6e6cd7e9 216 SUPERFAMILY SSF116726 131 214 1.01E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 Gene3D G3DSA:3.30.110.60 2 105 2.8E-30 T 12-10-2018 IPR035920 YhbY-like superfamily ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 6 94 1.4E-23 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 SUPERFAMILY SSF75471 4 97 1.44E-26 T 12-10-2018 IPR035920 YhbY-like superfamily ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 SMART SM01103 4 87 1.5E-36 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 3.3E-19 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABD1_26340 2b1516e85b37917f7e49aaa3cecf236c 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 8.0E-29 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 525 1.4E-37 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 Gene3D G3DSA:2.70.150.20 102 209 6.1E-25 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 Gene3D G3DSA:3.40.1110.10 317 441 4.7E-42 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 Pfam PF00122 E1-E2 ATPase 104 282 7.9E-31 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 598 2.7E-75 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 546 5.5E-23 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 5.5E-23 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 5.5E-23 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 5.5E-23 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 530 5.5E-23 T 12-10-2018 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 SUPERFAMILY SSF81665 33 661 1.06E-8 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 21 671 1.4E-289 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 12 675 38.409 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 SUPERFAMILY SSF81653 110 205 5.1E-20 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABD1_21390 1e26f6b45489de12dcf822b8b570eb1e 677 SUPERFAMILY SSF56784 291 554 2.06E-41 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 SUPERFAMILY SSF143800 1 80 6.28E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 7.2E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.58 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 Pfam PF01197 Ribosomal protein L31 1 78 6.0E-24 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.7E-14 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.7E-14 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.7E-14 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_03610 baa761bfd27ff54ffd5f70b4029ce27f 84 Gene3D G3DSA:2.30.170.50 1 83 3.4E-22 T 12-10-2018 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 SUPERFAMILY SSF53748 2 392 1.88E-138 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 Pfam PF00162 Phosphoglycerate kinase 6 383 1.1E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 Gene3D G3DSA:3.40.50.1260 165 383 1.0E-161 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PIRSF PIRSF000724 1 395 4.3E-127 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 Gene3D G3DSA:3.40.50.1260 10 389 1.0E-161 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.188 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_15520 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.4E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 8.7E-78 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 SUPERFAMILY SSF51735 8 160 3.29E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 Gene3D G3DSA:3.40.50.720 6 164 3.7E-48 T 12-10-2018 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.16 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 Gene3D G3DSA:1.10.3730.10 165 272 5.8E-41 T 12-10-2018 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 SUPERFAMILY SSF48179 163 270 5.61E-34 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 4.2E-35 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 4.0E-23 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABD1_06160 d20b558b829be9ebd9e2b0a2ce7eafd0 276 PIRSF PIRSF000193 6 270 2.2E-76 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 1.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 SMART SM00862 144 223 7.9E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 Pfam PF00072 Response regulator receiver domain 4 113 9.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 SUPERFAMILY SSF46894 122 225 7.37E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 SMART SM00448 2 112 3.1E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 Gene3D G3DSA:1.10.10.10 121 225 2.0E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 SUPERFAMILY SSF52172 1 126 2.85E-41 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_28260 a969b4e58208589a9352af80f3fab5bb 228 Gene3D G3DSA:3.40.50.2300 1 120 5.3E-37 T 12-10-2018 ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 Gene3D G3DSA:2.170.130.10 1 127 1.4E-24 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 SUPERFAMILY SSF56935 6 654 9.77E-124 T 12-10-2018 ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 16 654 3.7E-105 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 Gene3D G3DSA:2.40.170.20 128 654 2.9E-118 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 Pfam PF00593 TonB dependent receptor 189 653 1.6E-57 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_00940 8ecabd9aa6ccd956595eeea73393cdad 654 Pfam PF07715 TonB-dependent Receptor Plug Domain 15 117 3.9E-13 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 Gene3D G3DSA:1.20.1720.10 6 246 5.9E-40 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 SUPERFAMILY SSF103473 3 490 2.09E-61 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 6.3E-12 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 6.3E-12 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 218 236 6.3E-12 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 6.3E-12 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 6.3E-12 T 12-10-2018 ABD1_20530 3996ed94a67f687831dcf9c3b4bf6b37 492 Pfam PF07690 Major Facilitator Superfamily 13 401 1.8E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_15870 7198968388c98bfad871509fc4162adc 339 SUPERFAMILY SSF46689 291 337 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_15870 7198968388c98bfad871509fc4162adc 339 SMART SM00342 253 335 1.4E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_15870 7198968388c98bfad871509fc4162adc 339 Pfam PF12833 Helix-turn-helix domain 262 335 1.2E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_15870 7198968388c98bfad871509fc4162adc 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 203 2.7E-14 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_15870 7198968388c98bfad871509fc4162adc 339 Gene3D G3DSA:1.10.10.60 231 338 7.3E-19 T 12-10-2018 ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 464 538 1.6E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 SUPERFAMILY SSF56801 18 545 1.83E-142 T 12-10-2018 ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 Pfam PF00501 AMP-binding enzyme 36 455 2.9E-103 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 Gene3D G3DSA:3.40.50.12780 13 446 5.2E-112 T 12-10-2018 ABD1_18410 234aa7fa3f856c7c78cd5c0b2de31bed 546 Gene3D G3DSA:3.30.300.310 451 546 2.7E-31 T 12-10-2018 ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 Gene3D G3DSA:1.10.40.30 413 462 2.4E-16 T 12-10-2018 ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 2.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 2.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 2.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 2.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 Pfam PF10415 Fumarase C C-terminus 413 465 6.2E-16 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 SUPERFAMILY SSF48557 7 465 9.11E-133 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 Pfam PF00206 Lyase 16 346 4.1E-92 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 Gene3D G3DSA:1.10.275.10 5 143 1.4E-54 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_17190 c0f92ee789bc845924ffa9d21add2177 471 Gene3D G3DSA:1.20.200.10 144 411 3.4E-103 T 12-10-2018 ABD1_25620 8c4cff0532aebcb16fdf227117f6c576 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 277 3.5E-36 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_25620 8c4cff0532aebcb16fdf227117f6c576 319 PIRSF PIRSF026649 1 285 5.1E-67 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 Gene3D G3DSA:3.40.50.620 1 327 4.2E-152 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_30920 e336df17942018f1f0eb079b322e400d 502 SUPERFAMILY SSF48163 313 471 2.35E-34 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 Gene3D G3DSA:1.10.10.350 370 493 1.1E-29 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 1.2E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 1.2E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.2E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.2E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.2E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 4.9E-143 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 SUPERFAMILY SSF52374 2 307 9.92E-114 T 12-10-2018 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.563 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABD1_30920 e336df17942018f1f0eb079b322e400d 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 319 8.7E-114 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PIRSF PIRSF036480 6 287 1.3E-111 T 12-10-2018 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 Pfam PF01842 ACT domain 10 70 4.9E-8 T 12-10-2018 IPR002912 ACT domain ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 Pfam PF00551 Formyl transferase 94 269 1.9E-35 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.8E-58 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 Gene3D G3DSA:3.30.70.260 7 91 4.0E-23 T 12-10-2018 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 SUPERFAMILY SSF55021 8 91 1.52E-14 T 12-10-2018 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 4.7E-117 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 SUPERFAMILY SSF53328 94 287 7.46E-57 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 Gene3D G3DSA:3.40.50.170 94 287 4.5E-68 T 12-10-2018 ABD1_04220 cc811a52bddec042194a8a3ee6a4c02c 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 43.784 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 Gene3D G3DSA:3.30.390.30 339 457 4.5E-37 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 Gene3D G3DSA:3.50.50.60 140 261 1.8E-75 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 318 1.3E-35 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 SUPERFAMILY SSF55424 343 454 2.23E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PIRSF PIRSF000350 1 457 2.6E-57 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 Gene3D G3DSA:3.50.50.60 2 325 1.8E-75 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 448 1.8E-18 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 SUPERFAMILY SSF51905 1 359 2.42E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.7E-10 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 1.7E-10 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-10 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.7E-10 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.1E-33 T 12-10-2018 ABD1_28750 6f60e8825889b17ee7e0da799541ce8e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 5.1E-33 T 12-10-2018 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 Gene3D G3DSA:3.40.309.10 252 445 1.7E-167 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 Gene3D G3DSA:3.40.605.10 15 470 1.7E-167 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 Pfam PF00171 Aldehyde dehydrogenase family 15 475 1.4E-168 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_09090 c6fb0052240d1fb35c5b9ce84101894a 488 SUPERFAMILY SSF53720 4 479 4.71E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_20740 007385cb5078e9003d0dde43e6273182 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 170 1.8E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_20740 007385cb5078e9003d0dde43e6273182 718 Gene3D G3DSA:2.170.130.10 48 179 1.5E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_20740 007385cb5078e9003d0dde43e6273182 718 SUPERFAMILY SSF56935 35 718 4.12E-118 T 12-10-2018 ABD1_20740 007385cb5078e9003d0dde43e6273182 718 Gene3D G3DSA:2.40.170.20 182 718 5.8E-160 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_20740 007385cb5078e9003d0dde43e6273182 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 718 2.0E-105 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_20740 007385cb5078e9003d0dde43e6273182 718 Pfam PF00593 TonB dependent receptor 265 717 1.2E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_03830 17001696f576915c17368588f55be348 161 Pfam PF00293 NUDIX domain 7 145 4.9E-26 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_03830 17001696f576915c17368588f55be348 161 Gene3D G3DSA:3.90.79.10 1 155 3.1E-46 T 12-10-2018 ABD1_03830 17001696f576915c17368588f55be348 161 SUPERFAMILY SSF55811 7 155 8.12E-33 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_03830 17001696f576915c17368588f55be348 161 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABD1_03830 17001696f576915c17368588f55be348 161 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABD1_03830 17001696f576915c17368588f55be348 161 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_03830 17001696f576915c17368588f55be348 161 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.3 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH ABD1_28000 81977e1324a55acafa68ddac946e3170 271 Pfam PF01734 Patatin-like phospholipase 1 156 2.3E-11 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABD1_28000 81977e1324a55acafa68ddac946e3170 271 SUPERFAMILY SSF52151 1 268 1.12E-29 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_28000 81977e1324a55acafa68ddac946e3170 271 Gene3D G3DSA:3.40.1090.10 80 187 5.1E-9 T 12-10-2018 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 5.7E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 5.7E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 5.7E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 5.7E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SMART SM00382 195 340 5.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SMART SM00382 595 745 4.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 6.2E-56 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:1.10.8.60 764 857 2.7E-27 T 12-10-2018 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 145 339 2.4E-74 T 12-10-2018 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF52540 544 851 3.61E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11970 a2d25916557718d595206a8bdb62de96 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SMART SM01086 764 853 4.1E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:1.10.1780.10 1 144 9.3E-29 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 6.1E-11 T 12-10-2018 IPR004176 Clp, N-terminal ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 7.7E-5 T 12-10-2018 IPR004176 Clp, N-terminal ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 1.2E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF81923 4 153 8.04E-35 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 340 542 9.9E-66 T 12-10-2018 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF52540 157 543 7.56E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11970 a2d25916557718d595206a8bdb62de96 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 331 1.8E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 548 762 8.8E-89 T 12-10-2018 ABD1_11970 a2d25916557718d595206a8bdb62de96 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 2.0E-21 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 Pfam PF00467 KOW motif 6 34 4.4E-7 T 12-10-2018 IPR005824 KOW ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 SUPERFAMILY SSF50104 3 99 6.39E-30 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.332 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 SMART SM00739 3 30 1.7E-6 T 12-10-2018 IPR005824 KOW ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 1.2E-33 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29550 c95f575e30547f3d14d843a18a08609e 105 Gene3D G3DSA:2.30.30.30 1 102 2.9E-34 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABD1_25760 9a34df318ac73a66ce2b00a4d72a759b 326 Gene3D G3DSA:3.90.550.10 2 225 1.7E-38 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_25760 9a34df318ac73a66ce2b00a4d72a759b 326 SUPERFAMILY SSF53448 3 213 2.42E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_25760 9a34df318ac73a66ce2b00a4d72a759b 326 Pfam PF00535 Glycosyl transferase family 2 8 167 1.4E-29 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 SUPERFAMILY SSF53720 5 473 1.83E-154 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 Gene3D G3DSA:3.40.605.10 25 467 4.1E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 Gene3D G3DSA:3.40.309.10 254 443 4.1E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_24390 f2ca4298263afc0370dd82ed0b8ba033 476 Pfam PF00171 Aldehyde dehydrogenase family 22 466 6.9E-153 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_06730 4607e2096d1ff475ea219c405288438b 461 Pfam PF00890 FAD binding domain 3 432 6.0E-34 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_06730 4607e2096d1ff475ea219c405288438b 461 Gene3D G3DSA:3.90.700.10 236 397 1.9E-91 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_06730 4607e2096d1ff475ea219c405288438b 461 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 3 459 8.7E-200 T 12-10-2018 IPR012831 Precorrin 3B synthase CobZ ABD1_06730 4607e2096d1ff475ea219c405288438b 461 Gene3D G3DSA:3.50.50.60 3 455 1.9E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_06730 4607e2096d1ff475ea219c405288438b 461 SUPERFAMILY SSF56425 236 396 2.37E-26 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_06730 4607e2096d1ff475ea219c405288438b 461 SUPERFAMILY SSF51905 2 460 5.84E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03880 cfd0145839aa72f6d3d886f0a71b491b 215 Gene3D G3DSA:3.20.19.10 1 184 1.7E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABD1_03880 cfd0145839aa72f6d3d886f0a71b491b 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 4.8E-84 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ABD1_03880 cfd0145839aa72f6d3d886f0a71b491b 215 Pfam PF00694 Aconitase C-terminal domain 1 131 3.7E-37 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABD1_03880 cfd0145839aa72f6d3d886f0a71b491b 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.435 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ABD1_03880 cfd0145839aa72f6d3d886f0a71b491b 215 SUPERFAMILY SSF52016 2 204 1.18E-61 T 12-10-2018 ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 SMART SM00382 34 223 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 6.1E-94 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 SUPERFAMILY SSF52540 5 226 3.04E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 Gene3D G3DSA:3.40.50.300 3 226 6.6E-66 T 12-10-2018 ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 Pfam PF00005 ABC transporter 26 174 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_25640 9770728f61dd6bbc5df1275746b10fbd 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_13330 263f8f1fd9a9cac29f38772aaab01ee2 302 SUPERFAMILY SSF103481 203 300 2.88E-12 T 12-10-2018 ABD1_13330 263f8f1fd9a9cac29f38772aaab01ee2 302 SUPERFAMILY SSF103481 71 153 2.22E-9 T 12-10-2018 ABD1_13330 263f8f1fd9a9cac29f38772aaab01ee2 302 Pfam PF00892 EamA-like transporter family 16 148 1.0E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_13330 263f8f1fd9a9cac29f38772aaab01ee2 302 Pfam PF00892 EamA-like transporter family 166 299 3.8E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_19480 26d6766715bc8708b053db4eabcfd4d2 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 2.2E-149 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_19480 26d6766715bc8708b053db4eabcfd4d2 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 6.1E-105 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_19480 26d6766715bc8708b053db4eabcfd4d2 381 PIRSF PIRSF000267 2 380 6.4E-120 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABD1_17560 211fc9609708b7a07f2b5f0864c09a10 350 Gene3D G3DSA:3.20.20.140 2 350 3.0E-109 T 12-10-2018 ABD1_17560 211fc9609708b7a07f2b5f0864c09a10 350 ProSitePatterns PS00869 Renal dipeptidase active site. 131 153 - T 12-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ABD1_17560 211fc9609708b7a07f2b5f0864c09a10 350 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 345 1.4E-90 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ABD1_17560 211fc9609708b7a07f2b5f0864c09a10 350 SUPERFAMILY SSF51556 3 348 3.74E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 SUPERFAMILY SSF53187 1 320 8.93E-82 T 12-10-2018 ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 323 3.6E-53 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 2.9E-134 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 324 137.773 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 PIRSF PIRSF017020 1 324 1.2E-114 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ABD1_30160 153109ad7cb55c0df5584a2e87528f36 324 Gene3D G3DSA:3.40.630.10 1 324 2.7E-110 T 12-10-2018 ABD1_20920 e06627ca5b8f35bfe0f447b7ca7f1844 176 SMART SM00972 116 173 3.6E-19 T 12-10-2018 IPR007893 Spore coat protein U ABD1_20920 e06627ca5b8f35bfe0f447b7ca7f1844 176 Pfam PF05229 Spore Coat Protein U domain 27 173 1.3E-28 T 12-10-2018 IPR007893 Spore coat protein U ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 Gene3D G3DSA:1.10.10.10 3 89 2.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 Pfam PF03466 LysR substrate binding domain 89 292 7.1E-43 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 Gene3D G3DSA:3.40.190.10 91 291 3.8E-64 T 12-10-2018 ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 Gene3D G3DSA:3.40.190.10 163 266 3.8E-64 T 12-10-2018 ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 SUPERFAMILY SSF46785 3 111 6.05E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14120 8817b11ec89afc2259057cfcf7e70bff 306 SUPERFAMILY SSF53850 89 298 2.64E-45 T 12-10-2018 ABD1_07960 539a846162db52de77fceb769782d774 62 SUPERFAMILY SSF54862 3 51 3.35E-10 T 12-10-2018 ABD1_07960 539a846162db52de77fceb769782d774 62 Gene3D G3DSA:3.30.70.20 1 56 3.6E-19 T 12-10-2018 ABD1_12180 2ff8c674801fe4634d88137ebafb9cb9 420 Gene3D G3DSA:2.40.160.10 30 420 3.7E-139 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_12180 2ff8c674801fe4634d88137ebafb9cb9 420 Pfam PF03573 outer membrane porin, OprD family 38 419 6.1E-73 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 ABD1_12620 09fcadde2a7c68daa9db99c977a4c3a0 182 Gene3D G3DSA:2.60.450.10 34 175 5.3E-41 T 12-10-2018 ABD1_12620 09fcadde2a7c68daa9db99c977a4c3a0 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 32 171 5.6E-38 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ABD1_12620 09fcadde2a7c68daa9db99c977a4c3a0 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 12 172 23.032 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ABD1_12620 09fcadde2a7c68daa9db99c977a4c3a0 182 Pfam PF03968 OstA-like protein 44 153 4.7E-26 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 Gene3D G3DSA:3.40.50.720 1 272 4.0E-60 T 12-10-2018 ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 SUPERFAMILY SSF51735 4 238 2.41E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 Pfam PF00106 short chain dehydrogenase 9 198 1.8E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17770 2afbbc2ee7b8ae9ab7e4da8a33fd4ea2 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 181 6.1E-4 T 12-10-2018 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 Gene3D G3DSA:1.10.3730.40 182 338 2.8E-72 T 12-10-2018 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.023 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.0E-60 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 SUPERFAMILY SSF48179 183 332 3.57E-67 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 PIRSF PIRSF000116 2 203 1.3E-52 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 PIRSF PIRSF000116 201 333 2.0E-13 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 9.2E-76 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.1E-132 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 Gene3D G3DSA:3.40.50.720 1 181 2.9E-79 T 12-10-2018 ABD1_05140 23ef058fbd111a5c8acc67e8fd79b1ab 338 SUPERFAMILY SSF51735 1 182 4.16E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 SUPERFAMILY SSF48403 9 179 9.22E-45 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 SMART SM00248 50 79 3300.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 SMART SM00248 83 112 1.2 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 SMART SM00248 116 150 2.3 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 SMART SM00248 17 46 3.7E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 Gene3D G3DSA:1.25.40.20 2 180 8.7E-55 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 Pfam PF00023 Ankyrin repeat 18 49 1.7E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 PRINTS PR01415 Ankyrin repeat signature 84 99 1.8E-5 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 PRINTS PR01415 Ankyrin repeat signature 137 151 1.8E-5 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_13240 68cf17b05dad1590d5af5af033c40635 180 Pfam PF12796 Ankyrin repeats (3 copies) 58 152 4.7E-12 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain ABD1_20210 c521e5280c918519c7f9a9407e3a8c62 160 SUPERFAMILY SSF46785 6 143 8.92E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_20210 c521e5280c918519c7f9a9407e3a8c62 160 Gene3D G3DSA:1.10.10.10 3 160 4.7E-51 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20210 c521e5280c918519c7f9a9407e3a8c62 160 Pfam PF01638 HxlR-like helix-turn-helix 19 106 9.0E-23 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SUPERFAMILY SSF55174 21 72 8.51E-10 T 12-10-2018 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Pfam PF01479 S4 domain 22 68 2.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 307 2.0E-80 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Pfam PF00849 RNA pseudouridylate synthase 104 248 4.3E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Gene3D G3DSA:3.30.2350.10 95 310 3.1E-68 T 12-10-2018 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SUPERFAMILY SSF55120 96 307 3.04E-59 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Gene3D G3DSA:3.10.290.10 10 77 3.8E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_03730 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SMART SM00363 22 77 1.5E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_15650 5b24820c9e0392ac87f4e573ca42415d 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 336 34.416 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABD1_15650 5b24820c9e0392ac87f4e573ca42415d 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 329 3.2E-97 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABD1_15650 5b24820c9e0392ac87f4e573ca42415d 336 SUPERFAMILY SSF52540 52 155 4.16E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15650 5b24820c9e0392ac87f4e573ca42415d 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 329 5.0E-66 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 Pfam PF01634 ATP phosphoribosyltransferase 70 221 6.8E-50 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 1.3E-57 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.449 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 Gene3D G3DSA:3.40.190.10 22 211 2.4E-70 T 12-10-2018 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 SUPERFAMILY SSF53850 19 224 1.93E-64 T 12-10-2018 ABD1_06340 c8ce78a6c9c087848def0e099b14ab56 227 Gene3D G3DSA:3.40.190.10 112 193 2.4E-70 T 12-10-2018 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 SUPERFAMILY SSF52343 709 848 2.36E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Pfam PF00258 Flavodoxin 396 523 2.5E-25 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Pfam PF03929 PepSY-associated TM region 7 368 6.3E-63 T 12-10-2018 IPR005625 PepSY-associated TM protein ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Gene3D G3DSA:3.40.50.80 706 848 5.2E-40 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 SUPERFAMILY SSF63380 550 707 1.62E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Gene3D G3DSA:3.40.50.360 378 546 6.2E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00369 Flavodoxin signature 395 408 2.3E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00369 Flavodoxin signature 499 518 2.3E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00369 Flavodoxin signature 474 484 2.3E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00369 Flavodoxin signature 443 454 2.3E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 807 815 1.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 652 659 1.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 784 800 1.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 740 749 1.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 716 735 1.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 SUPERFAMILY SSF52218 392 540 1.02E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Gene3D G3DSA:1.20.990.10 549 677 3.7E-6 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 ABD1_27470 57231bcbc6cf70a02958825c579afb50 848 Pfam PF00175 Oxidoreductase NAD-binding domain 718 822 2.0E-9 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1089 1156 1.4E-10 T 12-10-2018 ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 SUPERFAMILY SSF52540 1 294 1.54E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 SUPERFAMILY SSF52540 1004 1175 4.28E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 Pfam PF13476 AAA domain 5 280 2.8E-24 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 Gene3D G3DSA:3.40.50.300 925 1198 4.5E-27 T 12-10-2018 ABD1_08450 69bb9d94186ff1e0dfd772b59e83035e 1198 Gene3D G3DSA:3.40.50.300 1 463 1.0E-31 T 12-10-2018 ABD1_17160 e566bf76a658e09cea3636ba86d4237e 93 Gene3D G3DSA:3.30.2020.30 1 92 1.7E-19 T 12-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 ABD1_17160 e566bf76a658e09cea3636ba86d4237e 93 Pfam PF06155 Protein of unknown function (DUF971) 7 87 1.1E-15 T 12-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 Pfam PF12833 Helix-turn-helix domain 178 253 2.1E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 SUPERFAMILY SSF46689 207 254 2.37E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 Gene3D G3DSA:1.10.10.60 156 254 2.4E-18 T 12-10-2018 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 248 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 SMART SM00342 170 252 8.4E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_01610 f06584f49c238fee4c4fc665d26cb1c9 254 SUPERFAMILY SSF51182 13 173 3.02E-7 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_17000 87f89f019706e3a3a1a94c8d6f83c89c 231 SMART SM00849 12 171 1.8E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_17000 87f89f019706e3a3a1a94c8d6f83c89c 231 Pfam PF00753 Metallo-beta-lactamase superfamily 15 171 6.6E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_17000 87f89f019706e3a3a1a94c8d6f83c89c 231 SUPERFAMILY SSF56281 3 226 8.26E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_17000 87f89f019706e3a3a1a94c8d6f83c89c 231 Gene3D G3DSA:3.60.15.10 1 231 3.1E-78 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_08090 792b9ed2391ecf8017a516a9b42df597 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 8.0E-50 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABD1_08090 792b9ed2391ecf8017a516a9b42df597 150 PIRSF PIRSF004638 1 150 2.0E-50 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABD1_08090 792b9ed2391ecf8017a516a9b42df597 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 6.3E-42 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.0E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 SUPERFAMILY SSF46785 5 76 2.37E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 SMART SM00345 7 66 6.6E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 Gene3D G3DSA:3.40.640.10 140 359 3.0E-82 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 SUPERFAMILY SSF53383 91 466 9.47E-87 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 Gene3D G3DSA:3.90.1150.10 97 461 3.0E-82 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 Pfam PF00155 Aminotransferase class I and II 145 456 2.9E-33 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_14320 a0320337b5978ee1cef2a556c2b81087 472 Gene3D G3DSA:1.10.10.10 2 67 1.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20900 ec041163a9c2dde8080b76e2ed4e1437 772 Gene3D G3DSA:2.60.40.2610 601 691 3.5E-7 T 12-10-2018 ABD1_20900 ec041163a9c2dde8080b76e2ed4e1437 772 Gene3D G3DSA:2.60.40.3110 216 296 7.1E-8 T 12-10-2018 ABD1_20900 ec041163a9c2dde8080b76e2ed4e1437 772 Pfam PF00577 Outer membrane usher protein 199 676 1.3E-24 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 ABD1_20900 ec041163a9c2dde8080b76e2ed4e1437 772 Pfam PF13953 PapC C-terminal domain 696 756 1.3E-8 T 12-10-2018 IPR025949 PapC-like, C-terminal domain ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 Gene3D G3DSA:3.20.70.20 219 882 8.1E-249 T 12-10-2018 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 278 869 9.6E-122 T 12-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 Pfam PF03477 ATP cone domain 123 201 3.9E-5 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 Pfam PF03477 ATP cone domain 11 108 3.6E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 SUPERFAMILY SSF48168 128 336 1.02E-57 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 3.3E-185 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 SUPERFAMILY SSF51998 337 874 3.66E-183 T 12-10-2018 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 1.6E-19 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 2.7E-47 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06990 0a3e89c078176e8573e620e682f47acf 944 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 1.0E-213 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 509 525 1.8E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 470 482 1.8E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 580 591 1.8E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 1.8E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 SUPERFAMILY SSF55486 28 682 3.11E-216 T 12-10-2018 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 Gene3D G3DSA:1.10.1380.10 74 465 1.8E-245 T 12-10-2018 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 Pfam PF05649 Peptidase family M13 50 426 1.1E-105 T 12-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 Pfam PF01431 Peptidase family M13 478 679 1.2E-75 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ABD1_27360 36c5b8271fcd2a80d720984ea2f573e9 682 Gene3D G3DSA:3.40.390.10 43 682 1.8E-245 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ABD1_30320 6171103088a7f9338271ca8c885bb62e 409 SUPERFAMILY SSF103473 9 399 2.35E-55 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_30320 6171103088a7f9338271ca8c885bb62e 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_30320 6171103088a7f9338271ca8c885bb62e 409 Gene3D G3DSA:1.20.1720.10 17 391 2.3E-64 T 12-10-2018 ABD1_30320 6171103088a7f9338271ca8c885bb62e 409 Pfam PF07690 Major Facilitator Superfamily 23 353 4.2E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_32420 5a25e814769caa0b57e0e1d6cccd94bd 397 SMART SM00267 220 388 8.6E-61 T 12-10-2018 IPR000160 GGDEF domain ABD1_32420 5a25e814769caa0b57e0e1d6cccd94bd 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 387 6.6E-47 T 12-10-2018 IPR000160 GGDEF domain ABD1_32420 5a25e814769caa0b57e0e1d6cccd94bd 397 Gene3D G3DSA:3.30.70.270 217 390 1.2E-53 T 12-10-2018 ABD1_32420 5a25e814769caa0b57e0e1d6cccd94bd 397 SUPERFAMILY SSF55073 236 389 1.49E-46 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_32420 5a25e814769caa0b57e0e1d6cccd94bd 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 384 4.3E-47 T 12-10-2018 IPR000160 GGDEF domain ABD1_23480 726ad52bb7f1b68c37dcf7c45de5fadf 169 SUPERFAMILY SSF64288 10 158 4.87E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_23480 726ad52bb7f1b68c37dcf7c45de5fadf 169 Pfam PF04345 Chorismate lyase 13 153 3.4E-19 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 ABD1_23480 726ad52bb7f1b68c37dcf7c45de5fadf 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 159 21.88 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 ABD1_23480 726ad52bb7f1b68c37dcf7c45de5fadf 169 Gene3D G3DSA:3.40.1410.10 2 159 1.5E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABD1_13920 9f908cd51afadc49ee83998f397cdbfe 203 Pfam PF01810 LysE type translocator 16 200 3.3E-24 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 Gene3D G3DSA:3.40.190.290 93 289 1.7E-58 T 12-10-2018 ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 Gene3D G3DSA:1.10.10.10 3 92 2.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 SUPERFAMILY SSF46785 4 87 5.56E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 Pfam PF03466 LysR substrate binding domain 88 290 2.9E-33 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_03690 87c1c4ca9d98ac34b8b6bfb416d3e8d6 304 SUPERFAMILY SSF53850 89 294 5.79E-38 T 12-10-2018 ABD1_26760 ee46cd3678f151ba24260b5ae85f75b1 231 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 41 231 1.0E-23 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ABD1_26760 ee46cd3678f151ba24260b5ae85f75b1 231 Gene3D G3DSA:2.50.20.10 36 231 8.6E-51 T 12-10-2018 ABD1_26760 ee46cd3678f151ba24260b5ae85f75b1 231 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 231 28.498 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ABD1_26760 ee46cd3678f151ba24260b5ae85f75b1 231 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 50 221 2.3E-39 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ABD1_26760 ee46cd3678f151ba24260b5ae85f75b1 231 SUPERFAMILY SSF89392 39 231 1.92E-46 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 12-10-2018 ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABD1_29430 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.3E-51 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABD1_28100 0be03ccfc695e4561da05311f00e2c3d 356 Gene3D G3DSA:3.30.70.1070 267 341 7.3E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_28100 0be03ccfc695e4561da05311f00e2c3d 356 Pfam PF05036 Sporulation related domain 272 344 2.2E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 ABD1_28100 0be03ccfc695e4561da05311f00e2c3d 356 SUPERFAMILY SSF110997 271 344 1.31E-13 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_26400 5ecc277fb09135a369bcfc31a9fc6716 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.7E-9 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_26400 5ecc277fb09135a369bcfc31a9fc6716 210 SUPERFAMILY SSF51161 65 203 8.04E-39 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_26400 5ecc277fb09135a369bcfc31a9fc6716 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_26400 5ecc277fb09135a369bcfc31a9fc6716 210 Gene3D G3DSA:2.160.10.10 7 210 1.2E-58 T 12-10-2018 ABD1_31240 8756e4958d43bdf021f6d5f5c791ec00 252 Pfam PF00977 Histidine biosynthesis protein 5 235 3.4E-89 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABD1_31240 8756e4958d43bdf021f6d5f5c791ec00 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 2.4E-113 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABD1_31240 8756e4958d43bdf021f6d5f5c791ec00 252 Gene3D G3DSA:3.20.20.70 1 252 3.2E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_31240 8756e4958d43bdf021f6d5f5c791ec00 252 SUPERFAMILY SSF51366 1 251 2.83E-86 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_31240 8756e4958d43bdf021f6d5f5c791ec00 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.784 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 SUPERFAMILY SSF55174 5 97 1.03E-17 T 12-10-2018 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 Gene3D G3DSA:3.30.70.1560 134 217 4.3E-49 T 12-10-2018 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 Pfam PF01479 S4 domain 4 48 1.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 Gene3D G3DSA:3.10.290.10 1 58 3.1E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 Gene3D G3DSA:3.30.70.580 68 235 4.3E-49 T 12-10-2018 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 SMART SM00363 3 64 6.2E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 SUPERFAMILY SSF55120 66 235 3.74E-41 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 Pfam PF00849 RNA pseudouridylate synthase 67 199 2.5E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_07660 fdd40895150e52f1e4ab073d9a88d372 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 5.2E-53 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_24100 081adb66c012b92e05ce01e89035579a 280 SUPERFAMILY SSF102114 40 263 2.35E-21 T 12-10-2018 ABD1_24100 081adb66c012b92e05ce01e89035579a 280 Gene3D G3DSA:3.20.20.70 1 273 5.6E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_24100 081adb66c012b92e05ce01e89035579a 280 Pfam PF13394 4Fe-4S single cluster domain 56 121 1.0E-5 T 12-10-2018 ABD1_24100 081adb66c012b92e05ce01e89035579a 280 TIGRFAM TIGR00238 TIGR00238: KamA family protein 1 267 7.7E-84 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABD1_24100 081adb66c012b92e05ce01e89035579a 280 PIRSF PIRSF004911 1 279 7.1E-99 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABD1_24100 081adb66c012b92e05ce01e89035579a 280 Pfam PF04055 Radical SAM superfamily 55 156 3.4E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_24100 081adb66c012b92e05ce01e89035579a 280 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 1 274 1.2E-117 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 507 4.3E-158 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 143 162 3.7E-34 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 3.7E-34 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 395 421 3.7E-34 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 343 362 3.7E-34 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 255 279 3.7E-34 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07150 6ec9fcb98bbba3db9739c136339ddfb2 532 Pfam PF00361 Proton-conducting membrane transporter 137 437 4.1E-66 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 SUPERFAMILY SSF55781 74 256 6.54E-26 T 12-10-2018 ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 SMART SM00346 10 99 9.7E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 Gene3D G3DSA:1.10.10.10 9 82 7.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 Pfam PF01614 Bacterial transcriptional regulator 128 218 2.6E-8 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 Gene3D G3DSA:3.30.450.40 83 257 1.3E-22 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 SUPERFAMILY SSF46785 10 81 6.0E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33180 dd5f3f046f6d27ab206969c91c8276c1 259 Pfam PF09339 IclR helix-turn-helix domain 12 61 2.4E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 2.4E-39 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 SUPERFAMILY SSF47203 233 388 1.48E-44 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Gene3D G3DSA:1.20.140.10 240 390 8.7E-45 T 12-10-2018 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 PIRSF PIRSF016578 12 390 3.2E-17 T 12-10-2018 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Gene3D G3DSA:1.10.540.10 2 125 2.2E-46 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 SUPERFAMILY SSF56645 5 247 8.51E-87 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 7.0E-37 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Gene3D G3DSA:2.40.110.10 126 239 9.9E-46 T 12-10-2018 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 9.6E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_13730 de07114d8e51dd1fa38e95ee952e2370 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_19640 0a98b14c9fee28dcb0bacee9e78024f2 139 Gene3D G3DSA:3.30.450.150 1 135 1.9E-29 T 12-10-2018 IPR038084 GlcG-like domain superfamily ABD1_19640 0a98b14c9fee28dcb0bacee9e78024f2 139 SUPERFAMILY SSF143744 3 134 1.19E-29 T 12-10-2018 IPR038084 GlcG-like domain superfamily ABD1_19640 0a98b14c9fee28dcb0bacee9e78024f2 139 Pfam PF03928 Haem-degrading 7 130 3.7E-22 T 12-10-2018 IPR005624 Haem-degrading ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 253 9.2E-48 T 12-10-2018 ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 Gene3D G3DSA:3.20.20.60 3 294 1.0E-101 T 12-10-2018 ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 SUPERFAMILY SSF51621 5 288 1.21E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 49.038 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABD1_00760 990d5a964ee5443dd64b3a95fddc7b94 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 3.2E-128 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 SUPERFAMILY SSF54111 1 99 8.63E-45 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 Pfam PF00547 Urease, gamma subunit 1 99 9.4E-46 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.5E-51 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-43 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 PIRSF PIRSF001223 1 100 1.1E-48 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 Gene3D G3DSA:3.30.280.10 1 100 8.1E-46 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09670 c45118caa29fac862e9af1e69479cfae 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.006 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_19230 0e7c0df941ebdee6fc6162d2fc260814 238 SUPERFAMILY SSF52266 44 234 1.83E-32 T 12-10-2018 ABD1_19230 0e7c0df941ebdee6fc6162d2fc260814 238 Gene3D G3DSA:3.40.50.1110 17 238 3.3E-25 T 12-10-2018 IPR036514 SGNH hydrolase superfamily ABD1_19230 0e7c0df941ebdee6fc6162d2fc260814 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 222 3.5E-15 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 Gene3D G3DSA:1.20.1050.10 87 195 2.2E-82 T 12-10-2018 ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 85 6.0E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 Gene3D G3DSA:3.40.30.10 8 203 2.2E-82 T 12-10-2018 ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 SUPERFAMILY SSF52833 7 91 4.94E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 SUPERFAMILY SSF47616 84 204 5.08E-13 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_14140 3f0b3e93e9757d389748c5ee23c4a6c0 208 Pfam PF14834 Glutathione S-transferase, C-terminal domain 92 206 3.6E-45 T 12-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 ABD1_25170 fc049ac22fd15432e36db804634ea9b5 270 SUPERFAMILY SSF56752 2 260 4.84E-54 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABD1_25170 fc049ac22fd15432e36db804634ea9b5 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 261 4.8E-67 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 ABD1_25170 fc049ac22fd15432e36db804634ea9b5 270 Gene3D G3DSA:3.30.470.10 3 107 2.5E-24 T 12-10-2018 ABD1_25170 fc049ac22fd15432e36db804634ea9b5 270 Pfam PF01063 Amino-transferase class IV 25 247 1.5E-44 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABD1_25170 fc049ac22fd15432e36db804634ea9b5 270 Gene3D G3DSA:3.20.10.10 125 264 2.0E-37 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 6.8E-11 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 381 6.8E-11 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 304 6.8E-11 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 413 6.8E-11 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Pfam PF13806 Rieske-like [2Fe-2S] domain 14 118 1.6E-37 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Gene3D G3DSA:3.50.50.60 139 422 3.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 415 1.2E-56 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 SUPERFAMILY SSF50022 14 123 2.49E-35 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 SUPERFAMILY SSF51905 135 324 9.15E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 252 4.3E-18 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 413 4.3E-18 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 382 4.3E-18 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 4.3E-18 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 297 4.3E-18 T 12-10-2018 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Gene3D G3DSA:2.102.10.10 9 121 7.6E-35 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 14 118 8.8E-31 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 SUPERFAMILY SSF51905 277 440 8.7E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Gene3D G3DSA:3.50.50.60 247 373 3.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_20300 5e6fcbd12fb3a36063d6c152d2cc4c5a 540 Gene3D G3DSA:3.30.390.30 450 512 7.5E-7 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABD1_20560 9471e267c2a53e9069df678156485ac6 284 Pfam PF01575 MaoC like domain 178 231 8.0E-12 T 12-10-2018 IPR002539 MaoC-like dehydratase domain ABD1_20560 9471e267c2a53e9069df678156485ac6 284 SUPERFAMILY SSF54637 179 282 1.24E-16 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_20560 9471e267c2a53e9069df678156485ac6 284 Gene3D G3DSA:3.10.129.10 34 284 7.6E-66 T 12-10-2018 ABD1_20560 9471e267c2a53e9069df678156485ac6 284 SUPERFAMILY SSF54637 33 154 7.38E-7 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_20560 9471e267c2a53e9069df678156485ac6 284 PRINTS PR01483 Fatty acid synthase signature 206 227 7.8E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ABD1_20560 9471e267c2a53e9069df678156485ac6 284 PRINTS PR01483 Fatty acid synthase signature 184 206 7.8E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ABD1_05380 3afde520677add778d62414d197e9933 140 SUPERFAMILY SSF54909 63 139 5.9E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_05380 3afde520677add778d62414d197e9933 140 SMART SM00344 1 107 1.3E-16 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_05380 3afde520677add778d62414d197e9933 140 Gene3D G3DSA:1.10.10.10 1 52 6.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_05380 3afde520677add778d62414d197e9933 140 Pfam PF01037 Lrp/AsnC ligand binding domain 68 137 1.5E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_05380 3afde520677add778d62414d197e9933 140 SUPERFAMILY SSF46785 3 56 7.18E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_05380 3afde520677add778d62414d197e9933 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.1E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_05380 3afde520677add778d62414d197e9933 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.1E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_05380 3afde520677add778d62414d197e9933 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.1E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_05380 3afde520677add778d62414d197e9933 140 Gene3D G3DSA:3.30.70.920 56 140 2.6E-15 T 12-10-2018 ABD1_05380 3afde520677add778d62414d197e9933 140 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 48 1.3E-14 T 12-10-2018 ABD1_19360 b7898b3e7c67ad2e21f8b6ce356f1d7a 226 Gene3D G3DSA:3.30.2010.10 125 214 1.3E-16 T 12-10-2018 ABD1_19360 b7898b3e7c67ad2e21f8b6ce356f1d7a 226 Pfam PF01863 Protein of unknown function DUF45 17 214 1.1E-47 T 12-10-2018 IPR002725 Protein of unknown function DUF45 ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 Gene3D G3DSA:3.30.700.10 13 159 1.7E-22 T 12-10-2018 ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 8.4E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 107 4.6E-8 T 12-10-2018 IPR031982 Type IV minor pilin ComP ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 1.4E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 SUPERFAMILY SSF54523 13 105 3.03E-20 T 12-10-2018 ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 1.4E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_30510 0507eb7bc6550b04fe25ed132d789bcb 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 1.4E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABD1_28250 e1e5168b68aadf5cf729d7fc4b330b27 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 446 5.3E-118 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 67 117 0.41 T 12-10-2018 IPR000644 CBS domain ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 131 179 19.0 T 12-10-2018 IPR000644 CBS domain ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF56176 206 278 3.27E-14 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF54631 55 191 5.49E-32 T 12-10-2018 ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM01091 201 279 5.9E-12 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF03471 Transporter associated domain 206 278 5.5E-15 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.10.580.10 38 190 2.0E-51 T 12-10-2018 ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.30.465.10 201 278 7.7E-19 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 126 179 6.9E-7 T 12-10-2018 IPR000644 CBS domain ABD1_03460 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 59 116 4.1E-5 T 12-10-2018 IPR000644 CBS domain ABD1_06500 94a00ab96bb8c9349b3812090a78bdae 483 Gene3D G3DSA:3.40.50.1460 291 467 1.1E-9 T 12-10-2018 ABD1_06500 94a00ab96bb8c9349b3812090a78bdae 483 Pfam PF01650 Peptidase C13 family 233 440 8.2E-42 T 12-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 ABD1_06500 94a00ab96bb8c9349b3812090a78bdae 483 SUPERFAMILY SSF52129 286 423 1.31E-7 T 12-10-2018 IPR029030 Caspase-like domain superfamily ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 Pfam PF00106 short chain dehydrogenase 7 199 7.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 SUPERFAMILY SSF51735 1 271 1.67E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 Gene3D G3DSA:3.40.50.720 1 275 2.9E-68 T 12-10-2018 ABD1_32750 29eb78c646a489a6b3701b68de64a0e2 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 SUPERFAMILY SSF52540 225 610 4.56E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 SMART SM00487 205 401 5.1E-20 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 Pfam PF04851 Type III restriction enzyme, res subunit 208 369 3.0E-14 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 Gene3D G3DSA:3.40.50.300 198 389 8.1E-75 T 12-10-2018 ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 Pfam PF00271 Helicase conserved C-terminal domain 533 599 1.2E-4 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 SMART SM00490 503 600 6.8E-6 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 TIGRFAM TIGR00595 priA: primosomal protein N' 231 738 3.9E-182 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 741 24.429 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABD1_03400 8b5ea2a1364b82b20bbb64fb57d7a987 742 Gene3D G3DSA:1.10.8.630 13 125 8.3E-31 T 12-10-2018 ABD1_14820 61623aa561e4a0e763e0cbb75bd15224 219 Gene3D G3DSA:1.10.3720.10 2 217 5.4E-55 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14820 61623aa561e4a0e763e0cbb75bd15224 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 217 6.4E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_14820 61623aa561e4a0e763e0cbb75bd15224 219 SUPERFAMILY SSF161098 8 202 6.93E-49 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_04840 c61558bfe5d77a142bef438236fbc49f 246 Gene3D G3DSA:3.90.550.10 5 238 2.2E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_04840 c61558bfe5d77a142bef438236fbc49f 246 SUPERFAMILY SSF53448 5 232 4.26E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_04840 c61558bfe5d77a142bef438236fbc49f 246 Pfam PF00535 Glycosyl transferase family 2 8 123 5.9E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 SUPERFAMILY SSF56024 509 689 1.91E-70 T 12-10-2018 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 688 1.2E-280 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 SUPERFAMILY SSF140356 16 117 1.7E-31 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Pfam PF13089 Polyphosphate kinase N-terminal domain 18 123 6.6E-32 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Pfam PF02503 Polyphosphate kinase middle domain 133 330 9.7E-60 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Gene3D G3DSA:3.30.870.10 327 510 2.8E-70 T 12-10-2018 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Hamap MF_00347 Polyphosphate kinase [ppk]. 15 685 27.297 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Gene3D G3DSA:3.30.1840.10 10 321 4.4E-98 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Pfam PF13090 Polyphosphate kinase C-terminal domain 339 687 2.1E-154 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 SUPERFAMILY SSF143724 121 322 2.75E-62 T 12-10-2018 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 SUPERFAMILY SSF56024 324 502 2.08E-54 T 12-10-2018 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 Gene3D G3DSA:3.30.870.10 513 690 8.6E-68 T 12-10-2018 ABD1_17500 b057c5230bf9ec404fdcf6e3f4225c38 691 PIRSF PIRSF015589 2 691 7.6E-272 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Hamap MF_00347 Polyphosphate kinase [ppk]. 16 682 27.798 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF143724 122 323 7.06E-65 T 12-10-2018 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF13089 Polyphosphate kinase N-terminal domain 19 124 2.3E-34 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF56024 510 690 1.61E-71 T 12-10-2018 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF140356 16 120 2.88E-36 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 PIRSF PIRSF015589 2 692 1.0E-279 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.870.10 326 509 8.3E-71 T 12-10-2018 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 688 6.3E-154 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF02503 Polyphosphate kinase middle domain 134 331 7.1E-62 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.870.10 510 692 8.7E-68 T 12-10-2018 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.1840.10 12 323 1.2E-103 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 689 2.6E-288 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ABD1_09430 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF56024 326 502 1.06E-56 T 12-10-2018 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 SUPERFAMILY SSF53901 277 400 6.96E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 Gene3D G3DSA:3.40.47.10 6 282 2.8E-158 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 Gene3D G3DSA:3.40.47.10 141 398 2.8E-158 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 Pfam PF00108 Thiolase, N-terminal domain 5 268 3.3E-80 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 Pfam PF02803 Thiolase, C-terminal domain 276 400 1.9E-46 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 1.3E-227 T 12-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.0E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 SUPERFAMILY SSF53901 3 276 7.74E-83 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABD1_18720 2bf3c36a5fff80f8c18baf0b7f8aa0f2 404 PIRSF PIRSF000429 1 402 2.6E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 Gene3D G3DSA:3.20.20.360 10 578 3.1E-265 T 12-10-2018 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 716 0.0 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 SUPERFAMILY SSF51645 3 717 2.22E-293 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 Gene3D G3DSA:2.170.170.11 132 261 3.1E-265 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 Hamap MF_00641 Malate synthase G [glcB]. 1 721 378.477 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 Pfam PF01274 Malate synthase 17 693 5.4E-163 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABD1_15890 c2ae52109d6938d028494c31d7e0fa10 721 Gene3D G3DSA:1.20.1220.12 579 721 2.9E-72 T 12-10-2018 ABD1_12120 78cda449af79d029fb66f4a9eae0944c 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 67 7.0E-29 T 12-10-2018 IPR023387 DUF1653-like domain ABD1_12120 78cda449af79d029fb66f4a9eae0944c 72 Gene3D G3DSA:2.30.30.320 1 72 3.5E-29 T 12-10-2018 IPR037135 DUF1653-like domain superfamily ABD1_20640 ed5e6d2829e00ac85e67d80c637b1dc1 390 TIGRFAM TIGR00843 benE: benzoate transporter 8 384 1.8E-112 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABD1_20640 ed5e6d2829e00ac85e67d80c637b1dc1 390 Pfam PF03594 Benzoate membrane transport protein 6 382 9.3E-127 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 4.9E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 Gene3D G3DSA:3.40.50.2020 7 302 1.3E-131 T 12-10-2018 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 8.6E-29 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 SMART SM01400 4 121 7.3E-79 T 12-10-2018 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.503 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 1.8E-121 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 SUPERFAMILY SSF53271 69 306 2.14E-65 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_07850 5f88cfc8a526d13dd6a8a8852e8bc852 316 Gene3D G3DSA:3.40.50.2020 148 290 1.3E-131 T 12-10-2018 ABD1_27780 777d2000de0e983343968886e3cd8a83 117 Gene3D G3DSA:3.10.490.10 1 117 2.8E-19 T 12-10-2018 ABD1_27780 777d2000de0e983343968886e3cd8a83 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 108 4.5E-13 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like ABD1_27780 777d2000de0e983343968886e3cd8a83 117 SUPERFAMILY SSF110857 1 109 2.35E-17 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 SUPERFAMILY SSF111369 84 161 2.88E-9 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 SUPERFAMILY SSF111369 217 301 8.76E-10 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 Gene3D G3DSA:2.40.30.170 262 377 1.9E-36 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 Gene3D G3DSA:2.40.50.100 80 113 4.4E-11 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 Gene3D G3DSA:1.10.287.470 148 220 1.2E-5 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 324 1.7E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 Gene3D G3DSA:1.10.287.470 114 146 4.4E-11 T 12-10-2018 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 377 4.4E-7 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_07280 c02159e7b478e40d0370c147de6ca5a8 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 4.4E-7 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_29730 dffe10e2fb21ef3dfcbbf99cfaf66e58 258 Pfam PF01926 50S ribosome-binding GTPase 63 176 2.9E-18 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 ABD1_29730 dffe10e2fb21ef3dfcbbf99cfaf66e58 258 SUPERFAMILY SSF52540 53 237 3.9E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29730 dffe10e2fb21ef3dfcbbf99cfaf66e58 258 Gene3D G3DSA:3.40.50.300 38 236 3.0E-49 T 12-10-2018 ABD1_29730 dffe10e2fb21ef3dfcbbf99cfaf66e58 258 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 44 229 6.7E-73 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABD1_29730 dffe10e2fb21ef3dfcbbf99cfaf66e58 258 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 49 233 26.87 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABD1_31260 53f26c2e29f6119cc86a147b18f649d6 334 Gene3D G3DSA:1.10.10.60 224 333 3.5E-23 T 12-10-2018 ABD1_31260 53f26c2e29f6119cc86a147b18f649d6 334 SUPERFAMILY SSF46689 280 331 1.58E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_31260 53f26c2e29f6119cc86a147b18f649d6 334 SMART SM00342 245 327 1.3E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_31260 53f26c2e29f6119cc86a147b18f649d6 334 Pfam PF12833 Helix-turn-helix domain 251 328 7.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_31260 53f26c2e29f6119cc86a147b18f649d6 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 51 199 4.3E-25 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 SUPERFAMILY SSF53800 6 333 3.6E-96 T 12-10-2018 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 35.379 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 TIGRFAM TIGR00109 hemH: ferrochelatase 6 328 2.7E-92 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 Gene3D G3DSA:3.40.50.1400 8 329 1.5E-92 T 12-10-2018 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 Pfam PF00762 Ferrochelatase 8 327 6.4E-102 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABD1_03530 26b2fa08f5528cf5770fde4a4c32a56d 338 Gene3D G3DSA:3.40.50.1400 171 309 1.5E-92 T 12-10-2018 ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 SUPERFAMILY SSF51735 10 254 7.15E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 Gene3D G3DSA:3.40.50.720 2 254 1.7E-81 T 12-10-2018 ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 1.0E-66 T 12-10-2018 ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18470 7df6e76228f61854aea6fe1a003cf27f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_02700 5f6da9502ab2a1e4d81cb76821cd9e64 474 Pfam PF13726 Na+-H+ antiporter family 2 88 7.1E-33 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal ABD1_02700 5f6da9502ab2a1e4d81cb76821cd9e64 474 PRINTS PR00173 Glutamate-aspartate symporter signature 407 426 1.4E-5 T 12-10-2018 ABD1_02700 5f6da9502ab2a1e4d81cb76821cd9e64 474 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.4E-5 T 12-10-2018 ABD1_02700 5f6da9502ab2a1e4d81cb76821cd9e64 474 Pfam PF03553 Na+/H+ antiporter family 150 468 8.9E-65 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 SUPERFAMILY SSF46785 8 82 2.72E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 78 1.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 SMART SM00345 19 78 7.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 Pfam PF07729 FCD domain 110 221 1.5E-20 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 Gene3D G3DSA:1.20.120.530 105 236 2.4E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 Gene3D G3DSA:1.10.10.10 11 85 8.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 SMART SM00895 107 228 6.5E-19 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_18640 ef7057e07b85f8478f8c17b82d3e40e8 238 SUPERFAMILY SSF48008 108 229 1.12E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 Gene3D G3DSA:1.10.10.10 7 95 3.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.9E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 Pfam PF03466 LysR substrate binding domain 94 300 9.0E-36 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 Gene3D G3DSA:3.40.190.10 168 273 6.8E-58 T 12-10-2018 ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 SUPERFAMILY SSF53850 94 306 7.06E-37 T 12-10-2018 ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 Gene3D G3DSA:3.40.190.10 96 299 6.8E-58 T 12-10-2018 ABD1_18270 d49a49636be405a34354ff77a95cf2bb 310 SUPERFAMILY SSF46785 7 90 9.48E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_28540 b433991e2aae8d2a4de198fc7fd648b9 189 Pfam PF04011 LemA family 7 168 7.9E-34 T 12-10-2018 IPR007156 LemA ABD1_28540 b433991e2aae8d2a4de198fc7fd648b9 189 Gene3D G3DSA:1.20.1440.20 16 177 3.5E-30 T 12-10-2018 IPR023353 LemA-like domain superfamily ABD1_28540 b433991e2aae8d2a4de198fc7fd648b9 189 SUPERFAMILY SSF140478 26 165 2.09E-32 T 12-10-2018 IPR023353 LemA-like domain superfamily ABD1_07030 f165ab05518d64145c9c89bb300ff1ea 473 Gene3D G3DSA:3.30.70.270 298 472 1.7E-51 T 12-10-2018 ABD1_07030 f165ab05518d64145c9c89bb300ff1ea 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 310 468 2.7E-44 T 12-10-2018 IPR000160 GGDEF domain ABD1_07030 f165ab05518d64145c9c89bb300ff1ea 473 SMART SM00267 298 472 3.5E-54 T 12-10-2018 IPR000160 GGDEF domain ABD1_07030 f165ab05518d64145c9c89bb300ff1ea 473 SUPERFAMILY SSF55073 314 471 3.22E-44 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_07030 f165ab05518d64145c9c89bb300ff1ea 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 471 7.9E-47 T 12-10-2018 IPR000160 GGDEF domain ABD1_10540 7c49eb717908abfeb3449039f9576579 94 Pfam PF05164 Cell division protein ZapA 7 78 1.6E-12 T 12-10-2018 IPR007838 Cell division protein ZapA-like ABD1_10540 7c49eb717908abfeb3449039f9576579 94 SUPERFAMILY SSF102829 7 89 8.63E-15 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily ABD1_10540 7c49eb717908abfeb3449039f9576579 94 Gene3D G3DSA:1.10.20.30 1 46 3.4E-7 T 12-10-2018 ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 Pfam PF02527 rRNA small subunit methyltransferase G 26 204 3.0E-51 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.791 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 6.1E-49 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 PIRSF PIRSF003078 1 210 6.7E-51 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 SUPERFAMILY SSF53335 7 209 2.48E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_15590 a180fb96923bba15ea0e943d0b297135 210 Gene3D G3DSA:3.40.50.150 3 210 4.9E-64 T 12-10-2018 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 22.079 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 63 1.2E-11 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 SUPERFAMILY SSF69737 72 139 2.22E-20 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 PIRSF PIRSF036402 2 159 3.8E-40 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 Gene3D G3DSA:3.30.70.790 73 144 5.9E-28 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 159 1.6E-27 T 12-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 SMART SM00988 2 66 5.0E-14 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 SUPERFAMILY SSF69287 1 72 1.31E-14 T 12-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily ABD1_09700 622b20fbbc7ababde8e1f162f6463373 160 Gene3D G3DSA:2.60.260.20 1 71 5.9E-16 T 12-10-2018 ABD1_18200 52afc7779d782283a9ce0b692a3c0b5e 391 Gene3D G3DSA:3.90.850.10 148 371 8.9E-44 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_18200 52afc7779d782283a9ce0b692a3c0b5e 391 SUPERFAMILY SSF56529 162 372 2.35E-26 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_18200 52afc7779d782283a9ce0b692a3c0b5e 391 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 217 365 1.1E-7 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABD1_01200 c368d8191f3b841a67c95fe994b90a04 86 Pfam PF00550 Phosphopantetheine attachment site 12 76 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_01200 c368d8191f3b841a67c95fe994b90a04 86 SMART SM00823 Phosphopantetheine attachment site 9 80 2.6E-17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 ABD1_01200 c368d8191f3b841a67c95fe994b90a04 86 Gene3D G3DSA:1.10.1200.10 1 86 3.3E-35 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_01200 c368d8191f3b841a67c95fe994b90a04 86 SMART SM01294 10 76 1.5E-7 T 12-10-2018 ABD1_01200 c368d8191f3b841a67c95fe994b90a04 86 SUPERFAMILY SSF47336 8 81 2.88E-19 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 PIRSF PIRSF006223 1 103 3.6E-21 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 2.9E-26 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Pfam PF04358 DsrC like protein 2 103 1.8E-27 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Gene3D G3DSA:1.10.10.370 33 103 3.2E-19 T 12-10-2018 ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Gene3D G3DSA:3.30.1420.10 1 29 2.0E-7 T 12-10-2018 ABD1_20180 72570dfa37ae34c06f3c0d1d29d6b9e8 103 SUPERFAMILY SSF69721 2 103 5.62E-29 T 12-10-2018 IPR025526 DsrC-like domain superfamily ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 SUPERFAMILY SSF88659 107 194 7.48E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 Pfam PF04542 Sigma-70 region 2 45 95 1.4E-5 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 43 192 5.6E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 Pfam PF08281 Sigma-70, region 4 136 185 7.0E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 Gene3D G3DSA:1.10.10.10 119 195 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_25510 066b3deb8aee266aa2008c1c39a309c2 204 SUPERFAMILY SSF88946 42 97 2.86E-7 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABD1_19280 99e1b3ba5fb564251b0b7b96a5c21bac 351 Gene3D G3DSA:3.20.20.70 10 346 4.8E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_19280 99e1b3ba5fb564251b0b7b96a5c21bac 351 Pfam PF00793 DAHP synthetase I family 43 334 5.5E-83 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_19280 99e1b3ba5fb564251b0b7b96a5c21bac 351 PIRSF PIRSF001361 3 348 3.2E-137 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABD1_19280 99e1b3ba5fb564251b0b7b96a5c21bac 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 344 6.5E-127 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABD1_19280 99e1b3ba5fb564251b0b7b96a5c21bac 351 SUPERFAMILY SSF51569 15 343 1.78E-114 T 12-10-2018 ABD1_13710 089fcd77951692eea5660654218c91ae 267 SUPERFAMILY SSF52096 1 259 1.99E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_13710 089fcd77951692eea5660654218c91ae 267 Gene3D G3DSA:3.90.226.10 1 203 2.8E-66 T 12-10-2018 ABD1_13710 089fcd77951692eea5660654218c91ae 267 Gene3D G3DSA:1.10.12.10 204 267 3.1E-22 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_13710 089fcd77951692eea5660654218c91ae 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABD1_13710 089fcd77951692eea5660654218c91ae 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 3.3E-54 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 Gene3D G3DSA:3.40.50.720 6 256 3.1E-68 T 12-10-2018 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 SUPERFAMILY SSF51735 1 149 4.3E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 PIRSF PIRSF005227 1 263 5.9E-70 T 12-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 Pfam PF01958 Domain of unknown function DUF108 164 251 2.7E-32 T 12-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 SUPERFAMILY SSF55347 120 233 1.9E-30 T 12-10-2018 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 263 33.739 T 12-10-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 116 1.1E-8 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ABD1_09080 7e4ae503da341d31973c6f04e8bf28f4 263 Gene3D G3DSA:3.30.360.10 120 238 3.1E-68 T 12-10-2018 ABD1_23470 aad22d9d4c9ac2dbe3fad6152bc0ed07 292 Gene3D G3DSA:1.20.120.1780 174 292 3.2E-12 T 12-10-2018 ABD1_23470 aad22d9d4c9ac2dbe3fad6152bc0ed07 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 3.5E-95 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ABD1_23470 aad22d9d4c9ac2dbe3fad6152bc0ed07 292 Pfam PF01040 UbiA prenyltransferase family 31 275 6.8E-56 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ABD1_23470 aad22d9d4c9ac2dbe3fad6152bc0ed07 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 28.127 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ABD1_23470 aad22d9d4c9ac2dbe3fad6152bc0ed07 292 Gene3D G3DSA:1.10.357.140 26 173 1.7E-38 T 12-10-2018 ABD1_05280 42cb62642a11c45157103871e3156044 382 Pfam PF00589 Phage integrase family 214 364 1.5E-12 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_05280 42cb62642a11c45157103871e3156044 382 Gene3D G3DSA:1.10.443.10 199 370 3.9E-16 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_05280 42cb62642a11c45157103871e3156044 382 SUPERFAMILY SSF56349 69 363 1.09E-25 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_02080 ba50814b180e477fb953fd441c7f2e56 392 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 224 230 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_02080 ba50814b180e477fb953fd441c7f2e56 392 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 18 310 1.5E-22 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ABD1_02080 ba50814b180e477fb953fd441c7f2e56 392 SUPERFAMILY SSF53335 16 319 3.08E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 91.58 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 479 1.4E-185 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 Gene3D G3DSA:3.90.1300.10 3 487 3.5E-201 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 Pfam PF01425 Amidase 25 468 1.5E-163 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_27300 35fa85f5316248fcbfec9e0089d700cd 492 SUPERFAMILY SSF75304 3 484 2.49E-165 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF55326 215 420 2.86E-61 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:3.30.1330.10 208 414 4.3E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:3.90.650.10 415 599 2.5E-59 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:3.90.650.10 800 964 8.6E-20 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1277 20.272 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:1.10.8.750 147 207 6.4E-28 T 12-10-2018 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:3.40.50.880 965 1277 1.3E-133 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Gene3D G3DSA:3.30.1330.10 608 799 4.6E-27 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF82697 1 145 2.25E-31 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 424 582 1.2E-30 T 12-10-2018 IPR010918 PurM-like, C-terminal domain ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 862 955 7.9E-7 T 12-10-2018 IPR010918 PurM-like, C-terminal domain ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF52317 1019 1276 2.95E-95 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF56042 421 648 8.52E-51 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1275 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF56042 816 1015 1.03E-40 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SMART SM01211 1022 1276 2.8E-154 T 12-10-2018 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1022 1276 7.0E-105 T 12-10-2018 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF109736 149 214 1.7E-21 T 12-10-2018 ABD1_25370 9da03c02b44a271f0f61fe6304ce8f09 1277 SUPERFAMILY SSF55326 611 809 9.42E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_11460 0cdaea7bf91394a4828f28c89d6561a8 156 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 100 5.3E-38 T 12-10-2018 IPR018738 Protein of unknown function DUF2280 ABD1_20390 4a2d8d190b53803b5e54de57bf4c6795 388 PIRSF PIRSF004925 3 388 1.0E-107 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter ABD1_20390 4a2d8d190b53803b5e54de57bf4c6795 388 SUPERFAMILY SSF103473 11 384 4.71E-45 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_20390 4a2d8d190b53803b5e54de57bf4c6795 388 Gene3D G3DSA:1.20.1250.20 9 190 3.5E-22 T 12-10-2018 ABD1_20390 4a2d8d190b53803b5e54de57bf4c6795 388 Gene3D G3DSA:1.20.1250.20 191 387 6.8E-34 T 12-10-2018 ABD1_20390 4a2d8d190b53803b5e54de57bf4c6795 388 Pfam PF12832 MFS_1 like family 9 363 1.6E-84 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain ABD1_10970 9008e31dcda7c924f461cdbbc8f3078e 443 PIRSF PIRSF006060 1 439 7.0E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_10970 9008e31dcda7c924f461cdbbc8f3078e 443 Gene3D G3DSA:1.20.1740.10 6 442 1.5E-63 T 12-10-2018 ABD1_10970 9008e31dcda7c924f461cdbbc8f3078e 443 Pfam PF00324 Amino acid permease 16 376 1.6E-29 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_10910 628b5b7ba4f98130257f013bde8088c7 223 SUPERFAMILY SSF52964 45 145 7.32E-8 T 12-10-2018 ABD1_10910 628b5b7ba4f98130257f013bde8088c7 223 Pfam PF03783 Curli production assembly/transport component CsgG 45 218 4.0E-29 T 12-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF01842 ACT domain 352 417 1.8E-11 T 12-10-2018 IPR002912 ACT domain ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 PIRSF PIRSF000098 1 431 2.6E-162 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF00742 Homoserine dehydrogenase 135 313 1.1E-65 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF55347 135 300 4.58E-54 T 12-10-2018 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.30.70.260 347 419 2.8E-160 T 12-10-2018 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF51735 2 156 3.49E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 9.3E-20 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.30.360.10 134 346 2.8E-160 T 12-10-2018 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF55021 350 420 3.23E-11 T 12-10-2018 ABD1_02230 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.40.50.720 4 338 2.8E-160 T 12-10-2018 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 SUPERFAMILY SSF53720 6 482 1.2E-174 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 3.5E-214 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 Pfam PF00171 Aldehyde dehydrogenase family 20 478 9.4E-175 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 Gene3D G3DSA:3.40.309.10 262 451 1.6E-186 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 Gene3D G3DSA:3.40.605.10 21 474 1.6E-186 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_08030 88126772e6c4603e1fcd520c78b8113f 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_21960 083499452d12fa20f1ac4dfdfdd25809 455 SUPERFAMILY SSF50952 62 435 2.48E-38 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ABD1_21960 083499452d12fa20f1ac4dfdfdd25809 455 Gene3D G3DSA:2.120.10.30 159 376 6.4E-17 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABD1_21960 083499452d12fa20f1ac4dfdfdd25809 455 Pfam PF07995 Glucose / Sorbosone dehydrogenase 169 361 1.2E-15 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 9.5E-72 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 Pfam PF01227 GTP cyclohydrolase I 4 180 1.2E-72 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 35.201 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 Gene3D G3DSA:1.10.286.10 1 49 6.2E-17 T 12-10-2018 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 SUPERFAMILY SSF55620 2 181 1.56E-73 T 12-10-2018 ABD1_23610 05b9448640ac9e729835e1c8bddc59fb 184 Gene3D G3DSA:3.30.1130.10 51 183 3.8E-59 T 12-10-2018 ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 SUPERFAMILY SSF54534 262 358 1.24E-23 T 12-10-2018 ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 SUPERFAMILY SSF109998 40 290 2.47E-23 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 Pfam PF13624 SurA N-terminal domain 1 158 8.0E-36 T 12-10-2018 ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 Pfam PF13616 PPIC-type PPIASE domain 253 362 4.8E-28 T 12-10-2018 ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 Gene3D G3DSA:3.10.50.40 265 360 1.4E-25 T 12-10-2018 ABD1_16240 2c589b60e7e0537ad0b9a98a42e7cedc 621 Gene3D G3DSA:1.10.4030.30 36 177 3.6E-12 T 12-10-2018 ABD1_24450 f57f1953715a34159f683b44cfc9954a 364 Pfam PF00487 Fatty acid desaturase 76 340 8.1E-28 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_21400 9105c68d0806a09335ebf9fb90810efb 569 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 566 27.954 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABD1_21400 9105c68d0806a09335ebf9fb90810efb 569 PIRSF PIRSF001294 1 568 2.1E-219 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABD1_21400 9105c68d0806a09335ebf9fb90810efb 569 Pfam PF03814 Potassium-transporting ATPase A subunit 6 564 1.3E-214 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABD1_21400 9105c68d0806a09335ebf9fb90810efb 569 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 565 5.0E-165 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABD1_06230 60e0abfd845f1fadfc48eb56d33b2cd4 143 Pfam PF02566 OsmC-like protein 45 138 1.8E-16 T 12-10-2018 IPR003718 OsmC/Ohr family ABD1_06230 60e0abfd845f1fadfc48eb56d33b2cd4 143 Gene3D G3DSA:3.30.300.20 48 141 2.7E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_06230 60e0abfd845f1fadfc48eb56d33b2cd4 143 Gene3D G3DSA:2.20.25.10 1 47 3.0E-22 T 12-10-2018 ABD1_06230 60e0abfd845f1fadfc48eb56d33b2cd4 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.8E-53 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 ABD1_06230 60e0abfd845f1fadfc48eb56d33b2cd4 143 SUPERFAMILY SSF82784 1 140 3.27E-44 T 12-10-2018 IPR036102 OsmC/Ohr superfamily ABD1_23180 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Gene3D G3DSA:2.40.40.10 107 201 2.3E-40 T 12-10-2018 IPR036908 RlpA-like domain superfamily ABD1_23180 6fa1fe5076da70aeb6d8c5749fedb7dd 205 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 110 200 1.1E-42 T 12-10-2018 IPR012997 Rare lipoprotein A ABD1_23180 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 200 24.95 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 ABD1_23180 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Pfam PF03330 Lytic transglycolase 108 196 1.5E-27 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain ABD1_23180 6fa1fe5076da70aeb6d8c5749fedb7dd 205 SUPERFAMILY SSF50685 108 201 6.98E-15 T 12-10-2018 IPR036908 RlpA-like domain superfamily ABD1_15410 c8979942bf50de1a1536b0affa386126 341 SMART SM00342 254 336 1.2E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_15410 c8979942bf50de1a1536b0affa386126 341 Gene3D G3DSA:1.10.10.60 235 339 1.5E-27 T 12-10-2018 ABD1_15410 c8979942bf50de1a1536b0affa386126 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 207 3.5E-23 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_15410 c8979942bf50de1a1536b0affa386126 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 2.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_15410 c8979942bf50de1a1536b0affa386126 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 2.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_15410 c8979942bf50de1a1536b0affa386126 341 SUPERFAMILY SSF46689 289 338 1.79E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_15410 c8979942bf50de1a1536b0affa386126 341 Pfam PF12833 Helix-turn-helix domain 261 337 3.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_05960 6d02851b4997127932edfbda363b9121 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_05960 6d02851b4997127932edfbda363b9121 542 Gene3D G3DSA:3.40.50.12780 7 440 2.7E-110 T 12-10-2018 ABD1_05960 6d02851b4997127932edfbda363b9121 542 Gene3D G3DSA:3.30.300.310 441 542 2.5E-34 T 12-10-2018 ABD1_05960 6d02851b4997127932edfbda363b9121 542 Pfam PF00501 AMP-binding enzyme 25 445 3.8E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_05960 6d02851b4997127932edfbda363b9121 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 7.7E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_05960 6d02851b4997127932edfbda363b9121 542 SUPERFAMILY SSF56801 9 540 1.44E-147 T 12-10-2018 ABD1_31390 6e81ed676e25f2507c822daae30aaea6 71 SUPERFAMILY SSF46785 1 69 4.04E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_31390 6e81ed676e25f2507c822daae30aaea6 71 Gene3D G3DSA:1.10.10.10 1 71 3.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31390 6e81ed676e25f2507c822daae30aaea6 71 Pfam PF01638 HxlR-like helix-turn-helix 1 70 2.2E-25 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_29030 c1aaff4fffee9c20faab5730ae6a2003 116 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 106 8.3E-9 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ABD1_29030 c1aaff4fffee9c20faab5730ae6a2003 116 SUPERFAMILY SSF51316 1 114 9.42E-31 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_29030 c1aaff4fffee9c20faab5730ae6a2003 116 Gene3D G3DSA:2.170.150.70 3 116 2.9E-31 T 12-10-2018 ABD1_19780 d5783f36ac78513b885109d28952639d 248 Gene3D G3DSA:3.40.50.1820 23 245 4.6E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19780 d5783f36ac78513b885109d28952639d 248 Pfam PF07859 alpha/beta hydrolase fold 59 142 1.6E-9 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_19780 d5783f36ac78513b885109d28952639d 248 SUPERFAMILY SSF53474 23 242 4.67E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.6E-66 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-36 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.0E-32 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:1.10.10.250 73 141 6.6E-27 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.168 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 SMART SM00649 9 141 7.5E-86 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.1E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF46906 68 141 3.01E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF54747 3 73 3.79E-31 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABD1_02600 b2d20d5cadba4f687b2b717b9e4e1856 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 12-10-2018 ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 Pfam PF00501 AMP-binding enzyme 32 417 5.1E-71 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 505 2.0E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 Gene3D G3DSA:3.30.300.30 414 539 3.5E-24 T 12-10-2018 ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 Gene3D G3DSA:3.40.50.12780 18 410 3.8E-89 T 12-10-2018 ABD1_23850 1c26a67f6f09b3c0f6a3d5a54a230f31 615 SUPERFAMILY SSF56801 17 519 2.62E-117 T 12-10-2018 ABD1_09460 959a09c2a8101999525c1cdab1f2877b 314 Pfam PF00561 alpha/beta hydrolase fold 40 163 3.0E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09460 959a09c2a8101999525c1cdab1f2877b 314 SUPERFAMILY SSF53474 6 311 1.24E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09460 959a09c2a8101999525c1cdab1f2877b 314 Gene3D G3DSA:3.40.50.1820 23 309 3.9E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.9E-53 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 SUPERFAMILY SSF47928 3 106 2.09E-25 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 2.8E-43 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Gene3D G3DSA:1.10.520.20 2 107 3.2E-30 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.1E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.1E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.1E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.1E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.1E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_01540 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.016 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 Pfam PF01416 tRNA pseudouridine synthase 11 104 2.3E-5 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.5E-27 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 SUPERFAMILY SSF55120 1 259 5.04E-86 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 PIRSF PIRSF001430 1 254 6.2E-76 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 2.6E-63 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 Gene3D G3DSA:3.30.70.660 107 243 4.1E-47 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.321 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03940 b6022ef9859bf32b95773a79327c6191 265 Gene3D G3DSA:3.30.70.580 1 106 1.8E-34 T 12-10-2018 ABD1_14390 8461474e66be86b956e12690a5aa372f 463 SUPERFAMILY SSF51679 1 440 6.02E-122 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_14390 8461474e66be86b956e12690a5aa372f 463 Pfam PF00296 Luciferase-like monooxygenase 25 389 5.8E-47 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABD1_14390 8461474e66be86b956e12690a5aa372f 463 PIRSF PIRSF000337 2 449 5.5E-140 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABD1_14390 8461474e66be86b956e12690a5aa372f 463 Gene3D G3DSA:3.20.20.30 1 457 3.1E-141 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_14390 8461474e66be86b956e12690a5aa372f 463 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 2.4E-165 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABD1_10060 74d40405e63c0115dcc9dd5137a48184 244 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 165 4.4E-32 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ABD1_10060 74d40405e63c0115dcc9dd5137a48184 244 SUPERFAMILY SSF53335 2 240 9.7E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_10060 74d40405e63c0115dcc9dd5137a48184 244 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 69 81 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 ABD1_10060 74d40405e63c0115dcc9dd5137a48184 244 Gene3D G3DSA:3.40.50.150 1 184 3.3E-38 T 12-10-2018 ABD1_04640 2c2772124eb8eaadf942a5dd9f0cc62d 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 337 48.306 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 ABD1_04640 2c2772124eb8eaadf942a5dd9f0cc62d 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 301 1.1E-72 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ABD1_04640 2c2772124eb8eaadf942a5dd9f0cc62d 339 Gene3D G3DSA:3.20.20.300 1 337 1.3E-110 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ABD1_04640 2c2772124eb8eaadf942a5dd9f0cc62d 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ABD1_04640 2c2772124eb8eaadf942a5dd9f0cc62d 339 SUPERFAMILY SSF51445 3 311 3.16E-78 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 SUPERFAMILY SSF46955 3 107 3.08E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 SMART SM00422 3 72 1.2E-28 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 Pfam PF07739 TipAS antibiotic-recognition domain 149 229 3.9E-8 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.3E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12820 e06f9ab651156d6f1d145f27e0ffabd4 342 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.8E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_27190 7f202c6016961b5f260a82359a9db601 476 Gene3D G3DSA:2.40.160.60 30 128 4.2E-7 T 12-10-2018 ABD1_27190 7f202c6016961b5f260a82359a9db601 476 Gene3D G3DSA:2.40.160.60 170 476 1.4E-23 T 12-10-2018 ABD1_27190 7f202c6016961b5f260a82359a9db601 476 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 180 476 1.8E-12 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABD1_27190 7f202c6016961b5f260a82359a9db601 476 SUPERFAMILY SSF56935 14 476 1.28E-55 T 12-10-2018 ABD1_12640 e86e871120c3f40eb5fc78871febc429 407 SUPERFAMILY SSF56954 2 388 5.36E-63 T 12-10-2018 ABD1_12640 e86e871120c3f40eb5fc78871febc429 407 Pfam PF02321 Outer membrane efflux protein 3 182 7.4E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_12640 e86e871120c3f40eb5fc78871febc429 407 Pfam PF02321 Outer membrane efflux protein 212 387 9.3E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_12640 e86e871120c3f40eb5fc78871febc429 407 Gene3D G3DSA:1.20.1600.10 2 398 8.7E-61 T 12-10-2018 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:3.10.50.40 149 245 6.9E-98 T 12-10-2018 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:3.30.70.1050 1 114 2.0E-35 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF54534 101 241 2.75E-36 T 12-10-2018 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 TIGRFAM TIGR00115 tig: trigger factor 12 419 5.7E-143 T 12-10-2018 IPR005215 Trigger factor GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 235 8.2E-16 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.7E-42 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF109998 247 436 3.14E-44 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:1.10.3120.10 115 424 6.9E-98 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF102735 1 129 6.54E-38 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 PIRSF PIRSF003095 1 441 1.2E-127 T 12-10-2018 IPR005215 Trigger factor GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 419 9.9E-36 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ABD1_04480 e725b7dbfad2b49ede035c0133b4c0f5 444 Hamap MF_00303 Trigger factor [tig]. 1 425 21.693 T 12-10-2018 IPR005215 Trigger factor GO:0015031 ABD1_17540 3a72aae3c0b852ff2e84b17d79169846 94 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 12 92 2.1E-36 T 12-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 ABD1_17540 3a72aae3c0b852ff2e84b17d79169846 94 Gene3D G3DSA:1.10.10.1150 3 93 1.1E-21 T 12-10-2018 ABD1_17540 3a72aae3c0b852ff2e84b17d79169846 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 29 91 9.1E-14 T 12-10-2018 IPR008792 Coenzyme PQQ synthesis D ABD1_17540 3a72aae3c0b852ff2e84b17d79169846 94 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 6 93 23.771 T 12-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 ABD1_31230 63b52e5ef0a2d6e8d79b3a1ba72ebebe 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 94.168 T 12-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABD1_31230 63b52e5ef0a2d6e8d79b3a1ba72ebebe 316 Pfam PF01636 Phosphotransferase enzyme family 26 254 8.8E-23 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase ABD1_31230 63b52e5ef0a2d6e8d79b3a1ba72ebebe 316 SUPERFAMILY SSF56112 5 313 5.83E-54 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_31230 63b52e5ef0a2d6e8d79b3a1ba72ebebe 316 Gene3D G3DSA:3.30.200.20 1 101 1.7E-19 T 12-10-2018 ABD1_31230 63b52e5ef0a2d6e8d79b3a1ba72ebebe 316 Gene3D G3DSA:3.90.1200.10 104 315 1.8E-53 T 12-10-2018 ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 5.8E-32 T 12-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 Pfam PF00462 Glutaredoxin 5 65 1.8E-22 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 SUPERFAMILY SSF52833 3 84 7.23E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 Gene3D G3DSA:3.40.30.10 2 85 1.6E-30 T 12-10-2018 ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 48 61 1.7E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 5 23 1.7E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup ABD1_04990 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 62 75 1.7E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 SMART SM00342 250 332 6.7E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 Gene3D G3DSA:1.10.10.60 231 341 8.0E-25 T 12-10-2018 ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 1.6E-21 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 Pfam PF12833 Helix-turn-helix domain 257 332 2.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 SUPERFAMILY SSF46689 286 335 4.66E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 1.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_27170 51cf44dc5bc55ce2e23c7686c0dd7a2a 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 1.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SUPERFAMILY SSF158472 86 134 1.96E-5 T 12-10-2018 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SMART SM00387 247 357 1.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_17720 317957e57925795d4e688ea36b3b1689 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 353 1.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_17720 317957e57925795d4e688ea36b3b1689 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 297 3.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 3.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 3.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 311 3.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 Gene3D G3DSA:1.10.287.130 140 204 1.9E-9 T 12-10-2018 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SUPERFAMILY SSF55874 192 353 1.23E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SMART SM00388 139 203 7.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 Gene3D G3DSA:1.20.1480.50 58 139 2.1E-6 T 12-10-2018 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SMART SM00304 84 138 2.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 Gene3D G3DSA:3.30.565.10 205 357 1.2E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_17720 317957e57925795d4e688ea36b3b1689 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 202 1.7E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_17720 317957e57925795d4e688ea36b3b1689 357 SUPERFAMILY SSF47384 122 204 1.45E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 Pfam PF13394 4Fe-4S single cluster domain 39 120 2.7E-11 T 12-10-2018 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 PIRSF PIRSF000370 16 236 2.1E-64 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 SUPERFAMILY SSF102114 41 119 3.27E-15 T 12-10-2018 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 Pfam PF04055 Radical SAM superfamily 42 123 4.4E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 Gene3D G3DSA:3.20.20.70 18 230 2.1E-34 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 36.159 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABD1_25260 987c15d5661d099af5da5344d281c44b 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 2.3E-102 T 12-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE ABD1_33230 30af921734bad3755e7984594a4c4d43 214 SUPERFAMILY SSF52499 6 213 2.62E-51 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_33230 30af921734bad3755e7984594a4c4d43 214 Gene3D G3DSA:3.40.50.850 5 214 2.7E-82 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABD1_33230 30af921734bad3755e7984594a4c4d43 214 Pfam PF00857 Isochorismatase family 10 207 7.0E-33 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 SUPERFAMILY SSF51338 32 90 6.84E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 SUPERFAMILY SSF51556 75 378 6.41E-105 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 1.1E-192 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 Pfam PF01979 Amidohydrolase family 73 432 2.0E-74 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 Gene3D G3DSA:3.20.20.140 76 393 6.3E-200 T 12-10-2018 ABD1_33880 0da25159b2702adf884db4c385e71a7f 441 Gene3D G3DSA:2.30.40.10 10 429 6.3E-200 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 Pfam PF00005 ABC transporter 377 530 4.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 Gene3D G3DSA:3.40.50.300 351 604 1.7E-87 T 12-10-2018 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 SUPERFAMILY SSF52540 350 600 4.8E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 SUPERFAMILY SSF90123 20 339 1.03E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 Pfam PF00664 ABC transporter transmembrane region 41 307 5.5E-13 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 Gene3D G3DSA:1.20.1560.10 25 347 7.1E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_15430 c77cbce42893391018dcf44a9f3fb8af 615 SMART SM00382 385 576 1.6E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF11638 DnaA N-terminal domain 2 60 4.0E-12 T 12-10-2018 IPR024633 DnaA N-terminal domain ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:3.30.300.180 1 111 2.6E-19 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF00308 Bacterial dnaA protein 129 347 4.5E-84 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 SUPERFAMILY SSF48295 362 464 4.97E-33 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 195 209 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 241 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 163 183 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 423 442 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 261 288 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:1.10.1750.10 372 465 3.2E-31 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 SUPERFAMILY SSF52540 130 342 3.03E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 SMART SM00382 162 292 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 464 29.598 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 SMART SM00760 373 442 5.0E-39 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 462 1.3E-153 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:3.40.50.300 128 295 8.8E-46 T 12-10-2018 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 374 442 5.0E-28 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 ProSitePatterns PS01008 DnaA protein signature. 423 442 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABD1_00010 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:1.10.8.60 296 366 1.1E-21 T 12-10-2018 ABD1_22760 3cf1903c47b9faf4ac13c4968344ff28 292 Gene3D G3DSA:3.40.50.1820 9 284 3.4E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_22760 3cf1903c47b9faf4ac13c4968344ff28 292 SUPERFAMILY SSF53474 15 270 1.63E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_22760 3cf1903c47b9faf4ac13c4968344ff28 292 Pfam PF00756 Putative esterase 25 205 9.9E-25 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ABD1_01850 24b8c9f53e8077d5f9209559a860fbc9 252 Gene3D G3DSA:3.20.20.80 32 246 1.6E-67 T 12-10-2018 ABD1_01850 24b8c9f53e8077d5f9209559a860fbc9 252 Pfam PF01183 Glycosyl hydrolases family 25 50 223 2.1E-45 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 ABD1_01850 24b8c9f53e8077d5f9209559a860fbc9 252 SUPERFAMILY SSF51445 43 245 6.46E-58 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily ABD1_01850 24b8c9f53e8077d5f9209559a860fbc9 252 SMART SM00641 46 147 2.7E-14 T 12-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup ABD1_28730 17146c561dd3730db67975f1d91e2379 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 1.2E-30 T 12-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 ABD1_28730 17146c561dd3730db67975f1d91e2379 111 Gene3D G3DSA:3.90.190.10 1 110 2.1E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_28730 17146c561dd3730db67975f1d91e2379 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 105 2.6E-27 T 12-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 ABD1_04350 b7d3db3dbff3e8fa02972957df3c69ca 726 Pfam PF05787 Bacterial protein of unknown function (DUF839) 211 670 3.5E-18 T 12-10-2018 IPR008557 Protein of unknown function DUF839 ABD1_16900 9060337d565a765b5e8e5943dc0ef5ef 379 Gene3D G3DSA:3.30.450.40 32 192 6.1E-28 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_17740 69bd0b7a45535ba9ba097da05b5968b3 334 Gene3D G3DSA:1.10.10.60 225 333 1.1E-21 T 12-10-2018 ABD1_17740 69bd0b7a45535ba9ba097da05b5968b3 334 SMART SM00342 245 327 8.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17740 69bd0b7a45535ba9ba097da05b5968b3 334 SUPERFAMILY SSF46689 280 330 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_17740 69bd0b7a45535ba9ba097da05b5968b3 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 42 201 3.9E-30 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_17740 69bd0b7a45535ba9ba097da05b5968b3 334 Pfam PF12833 Helix-turn-helix domain 251 328 9.6E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_32290 13bdcc9ffa1fede126d35456cc0f2e92 284 Pfam PF08478 POTRA domain, FtsQ-type 61 127 8.1E-13 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type ABD1_32290 13bdcc9ffa1fede126d35456cc0f2e92 284 Pfam PF03799 Cell division protein FtsQ 132 245 7.0E-16 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB ABD1_32290 13bdcc9ffa1fede126d35456cc0f2e92 284 Gene3D G3DSA:3.10.20.310 59 127 2.4E-12 T 12-10-2018 ABD1_32290 13bdcc9ffa1fede126d35456cc0f2e92 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 253 22.235 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 ABD1_32290 13bdcc9ffa1fede126d35456cc0f2e92 284 Gene3D G3DSA:3.40.50.11690 130 258 1.2E-30 T 12-10-2018 ABD1_02260 1a9f36eb2a9d5f045fe187cacb1a288f 87 Pfam PF04023 FeoA domain 1 80 2.3E-16 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABD1_02260 1a9f36eb2a9d5f045fe187cacb1a288f 87 Gene3D G3DSA:2.30.30.90 1 84 2.6E-24 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain ABD1_02260 1a9f36eb2a9d5f045fe187cacb1a288f 87 SMART SM00899 1 81 1.4E-17 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABD1_02260 1a9f36eb2a9d5f045fe187cacb1a288f 87 SUPERFAMILY SSF50037 5 81 7.33E-15 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal ABD1_17070 3c984c0c1c53fd44e236c39d53c00da9 202 SUPERFAMILY SSF52218 1 201 4.72E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_17070 3c984c0c1c53fd44e236c39d53c00da9 202 Gene3D G3DSA:3.40.50.360 1 201 2.9E-58 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_17070 3c984c0c1c53fd44e236c39d53c00da9 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 31.894 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ABD1_17070 3c984c0c1c53fd44e236c39d53c00da9 202 Pfam PF02525 Flavodoxin-like fold 1 199 9.9E-46 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_07550 70009dfe31632a344a33a528f676ff69 345 SMART SM00771 204 335 2.2E-49 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ABD1_07550 70009dfe31632a344a33a528f676ff69 345 Gene3D G3DSA:3.30.1400.10 202 343 4.0E-35 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 ABD1_07550 70009dfe31632a344a33a528f676ff69 345 SUPERFAMILY SSF64383 205 339 1.57E-32 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 ABD1_07550 70009dfe31632a344a33a528f676ff69 345 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 206 333 4.6E-31 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ABD1_07550 70009dfe31632a344a33a528f676ff69 345 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 220 343 3.0E-61 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ABD1_11490 faf7f42e8ea98cdc582e71ba6a2b6094 367 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 154 267 2.3E-18 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_11490 faf7f42e8ea98cdc582e71ba6a2b6094 367 Pfam PF04233 Phage Mu protein F like protein 151 263 2.2E-13 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.1E-11 T 12-10-2018 ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.1E-11 T 12-10-2018 ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.1E-11 T 12-10-2018 ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 Gene3D G3DSA:3.50.50.100 1 382 1.6E-76 T 12-10-2018 ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 SUPERFAMILY SSF51905 1 328 4.75E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_18520 c0dac7948ae05d88f9b2242c5159e601 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 2.3E-43 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 12-10-2018 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 1.8E-159 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.317 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 657 722 4.1E-21 T 12-10-2018 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1110.10 320 450 6.4E-33 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.2E-40 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.7E-30 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 358 463 1.2E-14 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 226 1.0E-6 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 2.0E-22 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 18 159 2.3E-52 T 12-10-2018 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 451 631 8.0E-69 T 12-10-2018 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.50.150 842 961 6.7E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1110.10 160 272 7.8E-29 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.50.100 723 797 8.0E-32 T 12-10-2018 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.270.10 799 841 4.9E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.270.10 1034 1261 5.2E-87 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABD1_02640 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 12-10-2018 ABD1_20140 042314e26a1674bb2be020a7be72dbe7 335 Gene3D G3DSA:3.90.25.10 193 328 6.2E-91 T 12-10-2018 ABD1_20140 042314e26a1674bb2be020a7be72dbe7 335 Gene3D G3DSA:3.40.50.720 2 273 6.2E-91 T 12-10-2018 ABD1_20140 042314e26a1674bb2be020a7be72dbe7 335 SUPERFAMILY SSF51735 2 332 1.29E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_20140 042314e26a1674bb2be020a7be72dbe7 335 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 333 9.3E-79 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ABD1_20140 042314e26a1674bb2be020a7be72dbe7 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 260 2.5E-40 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 SUPERFAMILY SSF53850 29 589 3.98E-89 T 12-10-2018 ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 PIRSF PIRSF002741 2 591 9.4E-63 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 Gene3D G3DSA:3.10.105.10 338 559 3.9E-33 T 12-10-2018 ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 511 1.1E-75 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 Gene3D G3DSA:3.40.190.10 218 337 9.3E-22 T 12-10-2018 ABD1_15950 7dcefff843f7ef984694cc806ab3a831 594 Gene3D G3DSA:3.90.76.10 44 217 9.7E-33 T 12-10-2018 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 Pfam PF07690 Major Facilitator Superfamily 36 408 4.7E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 Gene3D G3DSA:1.20.1250.20 25 303 4.4E-58 T 12-10-2018 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 SUPERFAMILY SSF103473 17 441 1.96E-80 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 Gene3D G3DSA:1.20.1250.20 304 442 2.2E-12 T 12-10-2018 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 14 415 2.5E-157 T 12-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 ABD1_19080 51e8e5d751d8395b5cbf9eb3abb4334f 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 SUPERFAMILY SSF47413 2 71 1.24E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 Pfam PF01381 Helix-turn-helix 12 64 3.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 Gene3D G3DSA:2.60.120.10 97 189 7.8E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 SMART SM00530 11 66 1.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 Gene3D G3DSA:1.10.260.40 2 78 1.7E-19 T 12-10-2018 ABD1_15210 f961fc76e5a8c7058a9e492ef60e0500 197 SUPERFAMILY SSF51182 59 187 9.9E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_12720 c98598de6d921f76e514bca8a4c2d26c 74 Gene3D G3DSA:3.30.70.20 1 69 2.2E-15 T 12-10-2018 ABD1_12720 c98598de6d921f76e514bca8a4c2d26c 74 SUPERFAMILY SSF54862 1 62 2.21E-12 T 12-10-2018 ABD1_12720 c98598de6d921f76e514bca8a4c2d26c 74 Pfam PF00037 4Fe-4S binding domain 1 22 1.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABD1_12720 c98598de6d921f76e514bca8a4c2d26c 74 Pfam PF11953 Domain of unknown function (DUF3470) 34 74 1.1E-19 T 12-10-2018 IPR022569 Ferredoxin, C-terminal ABD1_12720 c98598de6d921f76e514bca8a4c2d26c 74 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 7 18 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 SUPERFAMILY SSF100950 2 226 4.26E-86 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 SMART SM00882 5 217 6.1E-89 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 Gene3D G3DSA:3.40.1080.10 1 216 6.9E-96 T 12-10-2018 ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 Pfam PF01144 Coenzyme A transferase 6 217 1.7E-77 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_17270 4a602d47340f733bb9a8de0945cf3b19 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 4.9E-77 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABD1_25300 1fa911c5ef6fbc3e4dbb198d511b576f 153 Gene3D G3DSA:3.40.30.10 5 151 5.7E-35 T 12-10-2018 ABD1_25300 1fa911c5ef6fbc3e4dbb198d511b576f 153 Pfam PF00578 AhpC/TSA family 13 128 1.2E-25 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_25300 1fa911c5ef6fbc3e4dbb198d511b576f 153 PIRSF PIRSF000239 4 153 2.1E-23 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABD1_25300 1fa911c5ef6fbc3e4dbb198d511b576f 153 SUPERFAMILY SSF52833 7 151 9.91E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_21010 d7f0a07e5b2f20c620b0a6d1bba239b6 396 Gene3D G3DSA:3.30.450.40 23 205 3.3E-37 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_21010 d7f0a07e5b2f20c620b0a6d1bba239b6 396 SUPERFAMILY SSF46894 218 282 2.83E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_21010 d7f0a07e5b2f20c620b0a6d1bba239b6 396 Gene3D G3DSA:1.25.40.10 286 390 5.9E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_21010 d7f0a07e5b2f20c620b0a6d1bba239b6 396 SMART SM00862 226 291 0.0093 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABD1_27430 9aa2c0b4257a14626fbeeb89dbf3ced7 234 Pfam PF00881 Nitroreductase family 13 209 2.5E-36 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_27430 9aa2c0b4257a14626fbeeb89dbf3ced7 234 SUPERFAMILY SSF55469 9 232 6.54E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_27430 9aa2c0b4257a14626fbeeb89dbf3ced7 234 Gene3D G3DSA:3.40.109.10 2 230 1.8E-66 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_13030 9d235e9e4f7b1f7ce9b35ab3c1bb11db 246 Pfam PF09347 Domain of unknown function (DUF1989) 16 186 4.0E-42 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 ABD1_13030 9d235e9e4f7b1f7ce9b35ab3c1bb11db 246 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 12 242 5.9E-84 T 12-10-2018 IPR017792 Urea carboxylase-associated protein 2 ABD1_13370 7332b331672c51beb37d7e1eedee4421 76 Gene3D G3DSA:3.10.20.440 1 76 1.3E-11 T 12-10-2018 ABD1_13370 7332b331672c51beb37d7e1eedee4421 76 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 5.6E-18 T 12-10-2018 ABD1_13370 7332b331672c51beb37d7e1eedee4421 76 SUPERFAMILY SSF54292 1 76 1.26E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 Gene3D G3DSA:3.30.870.10 308 510 1.3E-36 T 12-10-2018 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 Gene3D G3DSA:3.30.870.10 79 277 4.9E-37 T 12-10-2018 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 SMART SM00155 183 210 0.0011 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 SMART SM00155 433 459 2.6E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 Pfam PF13091 PLD-like domain 94 242 1.5E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 Pfam PF13091 PLD-like domain 331 485 1.7E-20 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 SUPERFAMILY SSF56024 330 503 1.22E-28 T 12-10-2018 ABD1_28800 869b9c9ba1388c5143631224fef1ada2 541 SUPERFAMILY SSF56024 33 258 1.2E-43 T 12-10-2018 ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 194 7.1E-5 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 Gene3D G3DSA:1.20.1050.10 82 189 6.2E-41 T 12-10-2018 ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 Gene3D G3DSA:3.40.30.10 5 193 6.2E-41 T 12-10-2018 ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 SUPERFAMILY SSF47616 80 194 3.76E-15 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 SUPERFAMILY SSF52833 2 83 2.99E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_03760 df1b2d5e111661532b4324191ded5d86 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 1.9E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_23540 fa9c8ede5743926610595076be2df8a9 910 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 181 1.3E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_23540 fa9c8ede5743926610595076be2df8a9 910 SUPERFAMILY SSF56935 52 910 1.8E-91 T 12-10-2018 ABD1_23540 fa9c8ede5743926610595076be2df8a9 910 Gene3D G3DSA:2.170.130.10 46 185 5.8E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_23540 fa9c8ede5743926610595076be2df8a9 910 Pfam PF00593 TonB dependent receptor 395 909 4.1E-39 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 Gene3D G3DSA:3.40.50.150 1 130 1.8E-34 T 12-10-2018 ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 Pfam PF08468 Methyltransferase small domain N-terminal 1 137 1.8E-38 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 Gene3D G3DSA:3.40.50.150 132 318 1.1E-40 T 12-10-2018 ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 247 253 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 SUPERFAMILY SSF53335 130 314 5.34E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 Pfam PF05175 Methyltransferase small domain 145 314 9.7E-51 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABD1_27820 801c79b4b8ecd09b265ed6d537e6aa47 318 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 3 318 36.314 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 ABD1_20870 ae61c47990574be53b2e08538157a41b 253 SUPERFAMILY SSF51735 16 215 4.82E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_20870 ae61c47990574be53b2e08538157a41b 253 Gene3D G3DSA:3.40.50.720 11 253 8.7E-44 T 12-10-2018 ABD1_20870 ae61c47990574be53b2e08538157a41b 253 Pfam PF00106 short chain dehydrogenase 14 196 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00040 11ae41509002633f83e971f529f54f02 822 SUPERFAMILY SSF56719 407 817 2.43E-87 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 188 9.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_00040 11ae41509002633f83e971f529f54f02 822 Gene3D G3DSA:3.10.20.690 610 702 5.7E-7 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 752 812 2.5E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Gene3D G3DSA:3.30.565.10 15 232 3.9E-92 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_00040 11ae41509002633f83e971f529f54f02 822 SMART SM00433 49 816 1.2E-269 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Gene3D G3DSA:3.30.230.10 233 408 1.1E-72 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_00040 11ae41509002633f83e971f529f54f02 822 Pfam PF01751 Toprim domain 432 544 1.2E-17 T 12-10-2018 IPR006171 TOPRIM domain ABD1_00040 11ae41509002633f83e971f529f54f02 822 Gene3D G3DSA:3.40.50.670 716 821 1.3E-26 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 SUPERFAMILY SSF54211 234 405 6.45E-60 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_00040 11ae41509002633f83e971f529f54f02 822 SUPERFAMILY SSF55874 19 231 2.1E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 755 771 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 281 294 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.8E-71 T 12-10-2018 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 194 209 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 776 788 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 325 341 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 19 29 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 483 492 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 792 808 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 209 222 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 255 273 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 387 407 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 PRINTS PR01159 DNA gyrase subunit B signature 373 387 2.8E-72 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 818 1.7E-302 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_00040 11ae41509002633f83e971f529f54f02 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Pfam PF00204 DNA gyrase B 234 403 7.3E-62 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 SMART SM00387 45 189 4.0E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_00040 11ae41509002633f83e971f529f54f02 822 Gene3D G3DSA:3.40.50.670 409 609 1.6E-72 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_00040 11ae41509002633f83e971f529f54f02 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 822 101.291 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_28670 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 SMART SM00450 2 99 2.8E-11 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_28670 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 SUPERFAMILY SSF52821 14 103 4.32E-19 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_28670 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 Gene3D G3DSA:3.40.250.10 11 104 2.0E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_28670 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 Pfam PF00581 Rhodanese-like domain 16 91 4.6E-9 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_30940 b0388431f02a455f2067034cdbacfc2f 319 Gene3D G3DSA:3.40.50.1820 143 316 2.6E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_30940 b0388431f02a455f2067034cdbacfc2f 319 SUPERFAMILY SSF53474 179 287 1.77E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_24920 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 1 238 8.8E-77 T 12-10-2018 ABD1_24920 feaf69264996f174ec9424083af3366b 673 SMART SM00490 461 547 3.1E-21 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_24920 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 416 590 9.8E-50 T 12-10-2018 ABD1_24920 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:4.10.860.10 615 673 5.4E-10 T 12-10-2018 ABD1_24920 feaf69264996f174ec9424083af3366b 673 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.7E-21 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain ABD1_24920 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 267 415 2.4E-52 T 12-10-2018 ABD1_24920 feaf69264996f174ec9424083af3366b 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 89 2.3E-11 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABD1_24920 feaf69264996f174ec9424083af3366b 673 SMART SM00487 11 427 8.2E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_24920 feaf69264996f174ec9424083af3366b 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 43.31 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABD1_24920 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF46600 634 672 3.53E-11 T 12-10-2018 IPR036876 UVR domain superfamily ABD1_24920 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF52540 5 416 4.6E-144 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24920 feaf69264996f174ec9424083af3366b 673 Pfam PF00271 Helicase conserved C-terminal domain 442 545 5.4E-18 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_24920 feaf69264996f174ec9424083af3366b 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABD1_24920 feaf69264996f174ec9424083af3366b 673 Pfam PF02151 UvrB/uvrC motif 638 670 9.2E-10 T 12-10-2018 IPR001943 UVR domain GO:0005515 ABD1_24920 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF52540 35 587 5.94E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 176 5.5E-6 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 176 194 5.5E-6 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 5.5E-6 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 235 1.1E-20 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 236 1.1E-18 T 12-10-2018 IPR006260 TonB/TolA, C-terminal ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 Gene3D G3DSA:3.30.1150.10 106 238 5.8E-21 T 12-10-2018 ABD1_15930 04412dddfc7d74c0f8752b069f83c2c9 238 SUPERFAMILY SSF74653 160 235 1.03E-20 T 12-10-2018 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 SUPERFAMILY SSF144083 293 355 7.85E-20 T 12-10-2018 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 Gene3D G3DSA:1.20.58.340 163 299 3.0E-7 T 12-10-2018 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 Pfam PF01544 CorA-like Mg2+ transporter protein 47 354 7.6E-46 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 SUPERFAMILY SSF143865 38 291 9.81E-18 T 12-10-2018 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 Gene3D G3DSA:3.30.460.20 9 146 3.3E-5 T 12-10-2018 ABD1_03340 28fca8261d1cdfecc9aa384d2ff8d998 403 Gene3D G3DSA:1.20.58.340 301 357 3.3E-20 T 12-10-2018 ABD1_19210 74ef3f261ee22cec4595646630832f10 281 Pfam PF10118 Predicted metal-dependent hydrolase 14 259 7.8E-69 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_19210 74ef3f261ee22cec4595646630832f10 281 PIRSF PIRSF007580 1 277 2.6E-59 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:3.90.380.10 23 214 1.5E-48 T 12-10-2018 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:3.90.380.10 244 368 8.9E-7 T 12-10-2018 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 181 370 1.5E-20 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 7.7E-24 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 SUPERFAMILY SSF55961 161 369 7.38E-34 T 12-10-2018 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:2.102.10.10 43 165 1.5E-48 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 SUPERFAMILY SSF50022 18 156 4.19E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 371 74.412 T 12-10-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 ABD1_08020 4a04445b57d8940ac2ea9013ea67920b 371 Pfam PF00355 Rieske [2Fe-2S] domain 43 131 6.5E-19 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_09170 eda261c00ca6506b5fcfd1f404154943 406 Gene3D G3DSA:1.20.1250.20 226 404 1.3E-16 T 12-10-2018 ABD1_09170 eda261c00ca6506b5fcfd1f404154943 406 Gene3D G3DSA:1.20.1250.20 21 209 8.6E-22 T 12-10-2018 ABD1_09170 eda261c00ca6506b5fcfd1f404154943 406 Pfam PF07690 Major Facilitator Superfamily 32 262 7.9E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_09170 eda261c00ca6506b5fcfd1f404154943 406 SUPERFAMILY SSF103473 21 400 3.92E-53 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18660 00f1b801f58d493f049789d005acf146 304 Gene3D G3DSA:3.40.190.10 162 268 1.1E-69 T 12-10-2018 ABD1_18660 00f1b801f58d493f049789d005acf146 304 SUPERFAMILY SSF53850 90 295 5.52E-26 T 12-10-2018 ABD1_18660 00f1b801f58d493f049789d005acf146 304 SUPERFAMILY SSF46785 1 83 7.35E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18660 00f1b801f58d493f049789d005acf146 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.6E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18660 00f1b801f58d493f049789d005acf146 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18660 00f1b801f58d493f049789d005acf146 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18660 00f1b801f58d493f049789d005acf146 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18660 00f1b801f58d493f049789d005acf146 304 Gene3D G3DSA:3.40.190.10 92 293 1.1E-69 T 12-10-2018 ABD1_18660 00f1b801f58d493f049789d005acf146 304 Gene3D G3DSA:1.10.10.10 1 91 2.7E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18660 00f1b801f58d493f049789d005acf146 304 Pfam PF03466 LysR substrate binding domain 90 289 4.0E-28 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_31640 ab1b6045c4adaba0fa4dcb70928202de 641 Pfam PF07728 AAA domain (dynein-related subfamily) 379 489 8.5E-10 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 ABD1_31640 ab1b6045c4adaba0fa4dcb70928202de 641 SUPERFAMILY SSF52540 208 496 3.48E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15230 90698f58505c8397fb661a494fb96718 274 Gene3D G3DSA:3.40.710.10 25 274 2.8E-90 T 12-10-2018 ABD1_15230 90698f58505c8397fb661a494fb96718 274 Pfam PF00905 Penicillin binding protein transpeptidase domain 47 268 4.9E-28 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABD1_15230 90698f58505c8397fb661a494fb96718 274 SUPERFAMILY SSF56601 49 263 2.32E-30 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:2.60.34.10 382 522 1.7E-64 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:1.20.1270.10 523 606 1.4E-20 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.2E-76 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF100920 383 539 8.37E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF53067 2 182 5.18E-65 T 12-10-2018 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Pfam PF00012 Hsp70 protein 4 603 6.2E-260 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.30.420.40 5 378 3.2E-165 T 12-10-2018 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.30.420.40 179 365 3.2E-165 T 12-10-2018 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.6E-283 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.90.640.10 228 315 3.2E-165 T 12-10-2018 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 36.113 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF53067 186 381 5.44E-67 T 12-10-2018 ABD1_33730 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF100934 506 603 7.72E-18 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 SUPERFAMILY SSF53850 101 303 2.35E-20 T 12-10-2018 ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 Gene3D G3DSA:3.40.190.290 103 305 4.2E-13 T 12-10-2018 ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 SUPERFAMILY SSF46785 13 98 1.25E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 Pfam PF03466 LysR substrate binding domain 99 301 9.2E-19 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 Gene3D G3DSA:1.10.10.10 12 102 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_22350 f9dd1acbe786bddf552de0378bc53ed8 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 1.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 SUPERFAMILY SSF53720 4 484 1.7E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 3.3E-178 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 Gene3D G3DSA:3.40.605.10 3 254 1.6E-105 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.908 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 Gene3D G3DSA:3.40.309.10 255 486 1.4E-78 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_08800 5a7585fceb487c967e4a4806e0c3c89a 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.5E-227 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ABD1_18840 8a1f56eba962b97be0634c79ce6c93b8 175 Pfam PF13577 SnoaL-like domain 16 150 7.9E-19 T 12-10-2018 IPR037401 SnoaL-like domain ABD1_18840 8a1f56eba962b97be0634c79ce6c93b8 175 Gene3D G3DSA:3.10.450.50 11 160 1.3E-22 T 12-10-2018 ABD1_18840 8a1f56eba962b97be0634c79ce6c93b8 175 SUPERFAMILY SSF54427 7 163 2.85E-20 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_09420 3f4c07abb9b06a0b4782515f31b44081 225 Pfam PF00912 Transglycosylase 55 218 1.7E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_09420 3f4c07abb9b06a0b4782515f31b44081 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 224 37.0 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_09420 3f4c07abb9b06a0b4782515f31b44081 225 SUPERFAMILY SSF53955 51 221 6.19E-60 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_09420 3f4c07abb9b06a0b4782515f31b44081 225 Gene3D G3DSA:1.10.3810.10 51 224 2.4E-58 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_09420 3f4c07abb9b06a0b4782515f31b44081 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 8 223 1.3E-95 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 1.2E-132 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 SUPERFAMILY SSF53686 18 325 4.06E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 Gene3D G3DSA:3.40.50.1100 58 160 9.8E-123 T 12-10-2018 ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 2.4E-64 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 Gene3D G3DSA:3.40.50.1100 25 321 9.8E-123 T 12-10-2018 ABD1_01750 60c2b2d9867817d22fd45950d59bcd62 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 1.3E-127 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABD1_25470 10869378991efb0e6223a25202f227ec 187 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 179 29.811 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 ABD1_25470 10869378991efb0e6223a25202f227ec 187 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ABD1_25470 10869378991efb0e6223a25202f227ec 187 SUPERFAMILY SSF103088 70 177 4.97E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_25470 10869378991efb0e6223a25202f227ec 187 Pfam PF00691 OmpA family 79 173 1.4E-21 T 12-10-2018 IPR006665 OmpA-like domain ABD1_25470 10869378991efb0e6223a25202f227ec 187 Gene3D G3DSA:3.30.1330.60 67 180 2.5E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_25470 10869378991efb0e6223a25202f227ec 187 PRINTS PR01021 OMPA domain signature 109 124 2.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_25470 10869378991efb0e6223a25202f227ec 187 PRINTS PR01021 OMPA domain signature 79 101 2.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_25470 10869378991efb0e6223a25202f227ec 187 PRINTS PR01021 OMPA domain signature 124 140 2.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_25470 10869378991efb0e6223a25202f227ec 187 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 77 179 1.4E-43 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 ABD1_10180 8f530da0c94835bb746328cec96c36ec 475 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 325 460 1.2E-25 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit ABD1_10180 8f530da0c94835bb746328cec96c36ec 475 Pfam PF17289 Terminase RNaseH-like domain 314 459 1.7E-18 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 SUPERFAMILY SSF52540 1 1122 1.0E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 Gene3D G3DSA:3.40.50.300 924 1144 8.3E-47 T 12-10-2018 ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 Gene3D G3DSA:3.40.50.300 1 267 7.2E-53 T 12-10-2018 ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1137 4.1E-277 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 SUPERFAMILY SSF75553 494 626 3.53E-6 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1139 21.714 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1130 6.0E-54 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABD1_07540 3310ee4f920c722ba71b10d14be9685d 1149 PIRSF PIRSF005719 1 1144 1.8E-234 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:3.40.190.10 90 292 4.2E-68 T 12-10-2018 ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 SUPERFAMILY SSF46785 1 112 3.14E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:3.40.190.10 163 271 4.2E-68 T 12-10-2018 ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:1.10.10.10 1 89 1.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 SUPERFAMILY SSF53850 89 293 3.39E-34 T 12-10-2018 ABD1_21220 a5ac99905dd3d97f5f279ea1a9cfac64 306 Pfam PF03466 LysR substrate binding domain 90 293 2.5E-34 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_00220 bd1d470eaa4c145708d65e9f17eed723 188 Pfam PF01048 Phosphorylase superfamily 28 173 1.7E-17 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABD1_00220 bd1d470eaa4c145708d65e9f17eed723 188 Gene3D G3DSA:3.40.50.1580 1 187 6.2E-40 T 12-10-2018 ABD1_00220 bd1d470eaa4c145708d65e9f17eed723 188 SUPERFAMILY SSF53167 5 183 3.67E-35 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABD1_33400 df9182269064b61bcea53807da2444d4 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33400 df9182269064b61bcea53807da2444d4 474 Pfam PF00155 Aminotransferase class I and II 135 449 8.4E-27 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_33400 df9182269064b61bcea53807da2444d4 474 SUPERFAMILY SSF53383 100 468 2.82E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_33400 df9182269064b61bcea53807da2444d4 474 SMART SM00345 8 67 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_33400 df9182269064b61bcea53807da2444d4 474 Gene3D G3DSA:3.90.1150.10 100 464 1.3E-80 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_33400 df9182269064b61bcea53807da2444d4 474 SUPERFAMILY SSF46785 5 71 6.1E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_33400 df9182269064b61bcea53807da2444d4 474 Gene3D G3DSA:1.10.10.10 1 69 1.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_33400 df9182269064b61bcea53807da2444d4 474 Gene3D G3DSA:3.40.640.10 142 360 1.3E-80 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_27140 2e83d8589023a7c8fc732606fc644600 272 Pfam PF02673 Bacitracin resistance protein BacA 9 260 6.1E-85 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABD1_27140 2e83d8589023a7c8fc732606fc644600 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 3.1E-78 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABD1_27140 2e83d8589023a7c8fc732606fc644600 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 18.297 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 SUPERFAMILY SSF52540 317 524 1.7E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 Pfam PF00664 ABC transporter transmembrane region 58 275 3.8E-7 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 Gene3D G3DSA:3.40.50.300 322 527 9.6E-64 T 12-10-2018 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 Gene3D G3DSA:1.20.1560.10 5 314 3.5E-15 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 SUPERFAMILY SSF90123 22 315 1.7E-22 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 SMART SM00382 346 528 4.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_23710 f98a9b82cf0fbea60371862863749e98 531 Pfam PF00005 ABC transporter 337 486 2.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 9.7E-265 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 6.1E-17 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 4.0E-27 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:3.50.40.10 197 393 1.5E-74 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SMART SM00896 698 791 3.0E-40 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SUPERFAMILY SSF46955 404 475 1.01E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:3.30.56.10 400 474 4.5E-22 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.949 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Pfam PF03483 B3/4 domain 212 384 2.2E-67 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Pfam PF01588 Putative tRNA binding domain 45 145 2.6E-28 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:3.30.70.380 699 792 1.5E-28 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SUPERFAMILY SSF56037 206 393 4.71E-70 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SMART SM00873 211 384 2.5E-93 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:2.40.50.140 39 154 5.0E-73 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SMART SM00874 402 471 9.9E-25 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SUPERFAMILY SSF50249 38 197 3.67E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SUPERFAMILY SSF55681 467 686 3.03E-46 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:3.30.930.10 488 688 2.6E-52 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 Gene3D G3DSA:3.30.56.10 7 180 5.0E-73 T 12-10-2018 ABD1_06080 dfba5340240e0d390ce3e607a90a9654 793 SUPERFAMILY SSF54991 694 791 1.57E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 SUPERFAMILY SSF53720 4 457 9.16E-121 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 Gene3D G3DSA:3.40.605.10 9 451 5.5E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 Pfam PF00171 Aldehyde dehydrogenase family 11 461 1.1E-118 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 488 57.951 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 487 7.0E-256 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ABD1_30180 5fc49c0deb9c3b9330e35e8923fd69b7 489 Gene3D G3DSA:3.40.309.10 249 439 5.5E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 129 6.4E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 218 226 6.4E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 137 156 6.4E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 Gene3D G3DSA:3.40.50.80 128 256 8.7E-26 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 SUPERFAMILY SSF52343 118 241 3.4E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 Pfam PF00175 Oxidoreductase NAD-binding domain 138 231 2.4E-11 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 Pfam PF00970 Oxidoreductase FAD-binding domain 36 127 3.2E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 Gene3D G3DSA:3.10.20.30 257 341 1.6E-9 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 SUPERFAMILY SSF63380 24 130 3.4E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 Gene3D G3DSA:2.40.30.10 28 127 2.4E-11 T 12-10-2018 ABD1_00380 774e787abcfabe8511ba2d439ab72d55 341 SUPERFAMILY SSF54292 242 341 1.89E-13 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.6E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 Pfam PF00106 short chain dehydrogenase 3 187 2.8E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 SUPERFAMILY SSF51735 3 233 1.93E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 Gene3D G3DSA:3.40.50.720 2 238 1.2E-60 T 12-10-2018 ABD1_25000 a073b3b623e8ef81c50b45bd07986727 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 439 1.2E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 8.8E-21 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Gene3D G3DSA:3.30.310.50 372 456 2.4E-26 T 12-10-2018 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Gene3D G3DSA:3.40.120.10 2 148 1.9E-52 T 12-10-2018 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 7.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 7.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 7.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 7.6E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 SUPERFAMILY SSF53738 152 259 1.96E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 4.7E-22 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Gene3D G3DSA:3.40.120.10 170 252 1.7E-28 T 12-10-2018 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Gene3D G3DSA:3.40.120.10 253 371 1.1E-30 T 12-10-2018 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 2.3E-34 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 SUPERFAMILY SSF53738 4 175 4.41E-39 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 SUPERFAMILY SSF53738 261 366 1.02E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_00690 29f0afa92ed9a61b2138a0744cfddda2 456 SUPERFAMILY SSF55957 370 454 5.93E-19 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_14000 b89e65f992dfa5c7a8a2c9b3487e8872 221 SUPERFAMILY SSF161098 14 209 1.53E-36 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14000 b89e65f992dfa5c7a8a2c9b3487e8872 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 218 2.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_14000 b89e65f992dfa5c7a8a2c9b3487e8872 221 Gene3D G3DSA:1.10.3720.10 1 221 2.9E-44 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14000 b89e65f992dfa5c7a8a2c9b3487e8872 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.5E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 429 1.6E-179 T 12-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 230 1.0E-49 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF142984 254 337 4.84E-21 T 12-10-2018 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 SMART SM00928 342 387 4.6E-21 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF10531 SLBB domain 259 304 5.1E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 178 193 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:3.40.50.11540 64 241 4.2E-78 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 355 366 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:3.10.20.600 245 339 1.6E-28 T 12-10-2018 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 345 427 2.6E-25 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:1.20.1440.230 340 441 4.7E-27 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF140490 339 432 7.45E-31 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07080 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF142019 22 245 7.45E-85 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_04900 bc6199c2f4d077f6c3346c7d8e1890a8 431 Gene3D G3DSA:3.50.50.60 4 429 4.1E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_04900 bc6199c2f4d077f6c3346c7d8e1890a8 431 Pfam PF01494 FAD binding domain 7 187 3.7E-17 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 ABD1_04900 bc6199c2f4d077f6c3346c7d8e1890a8 431 SUPERFAMILY SSF51905 5 374 7.13E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_32600 3c4ba5ed15a5d210ce3b9536ba6b6c68 218 Gene3D G3DSA:3.40.50.1000 5 201 2.3E-14 T 12-10-2018 IPR023214 HAD superfamily ABD1_32600 3c4ba5ed15a5d210ce3b9536ba6b6c68 218 SUPERFAMILY SSF56784 1 206 1.12E-11 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_32600 3c4ba5ed15a5d210ce3b9536ba6b6c68 218 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 ABD1_32600 3c4ba5ed15a5d210ce3b9536ba6b6c68 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 181 9.0E-16 T 12-10-2018 ABD1_32600 3c4ba5ed15a5d210ce3b9536ba6b6c68 218 Gene3D G3DSA:1.20.1440.100 16 89 2.3E-14 T 12-10-2018 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 Gene3D G3DSA:3.90.470.10 1 109 3.9E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-46 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.555 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 SUPERFAMILY SSF54843 1 107 9.29E-42 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29610 774a2883ca33b13d52ae7b828a079092 109 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-36 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ABD1_00560 428ae954d00cfa0e16179fa247bab6ea 392 Gene3D G3DSA:3.40.50.2000 196 375 3.7E-20 T 12-10-2018 ABD1_00560 428ae954d00cfa0e16179fa247bab6ea 392 Gene3D G3DSA:3.40.50.2000 89 380 3.7E-20 T 12-10-2018 ABD1_00560 428ae954d00cfa0e16179fa247bab6ea 392 Pfam PF13692 Glycosyl transferases group 1 212 356 2.5E-10 T 12-10-2018 ABD1_00560 428ae954d00cfa0e16179fa247bab6ea 392 SUPERFAMILY SSF53756 83 391 1.33E-24 T 12-10-2018 ABD1_00160 5b18f4a5d8f612455b3449c919f030e7 180 SUPERFAMILY SSF52218 1 174 4.81E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_00160 5b18f4a5d8f612455b3449c919f030e7 180 Pfam PF03358 NADPH-dependent FMN reductase 1 139 1.7E-31 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABD1_00160 5b18f4a5d8f612455b3449c919f030e7 180 Gene3D G3DSA:3.40.50.360 1 176 1.7E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_27730 1ff324dd5f193bb525e534d33cbcaf3f 369 SUPERFAMILY SSF51395 1 360 1.19E-110 T 12-10-2018 ABD1_27730 1ff324dd5f193bb525e534d33cbcaf3f 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 4.3E-72 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_27730 1ff324dd5f193bb525e534d33cbcaf3f 369 Gene3D G3DSA:3.20.20.70 1 358 1.5E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_29370 5e0766008815047a1310e1d72c186ff8 85 Gene3D G3DSA:1.10.150.250 3 84 7.6E-21 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily ABD1_29370 5e0766008815047a1310e1d72c186ff8 85 SUPERFAMILY SSF109910 6 81 8.24E-19 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily ABD1_29370 5e0766008815047a1310e1d72c186ff8 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 76 6.9E-18 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_16960 af4065343905fb9c144e05eff7940245 261 TIGRFAM TIGR02415 23BDH: acetoin reductases 8 261 5.4E-109 T 12-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 ABD1_16960 af4065343905fb9c144e05eff7940245 261 Pfam PF00106 short chain dehydrogenase 8 199 2.8E-59 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 SUPERFAMILY SSF51735 6 259 1.28E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_16960 af4065343905fb9c144e05eff7940245 261 Gene3D G3DSA:3.40.50.720 7 260 2.8E-88 T 12-10-2018 ABD1_24400 a4fb5d348a2475b7eca1b94e5b7ce015 510 SUPERFAMILY SSF53383 19 496 9.11E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_24400 a4fb5d348a2475b7eca1b94e5b7ce015 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 81 428 1.2E-61 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 ABD1_24400 a4fb5d348a2475b7eca1b94e5b7ce015 510 Gene3D G3DSA:3.90.1150.170 45 488 2.7E-128 T 12-10-2018 ABD1_24400 a4fb5d348a2475b7eca1b94e5b7ce015 510 Gene3D G3DSA:3.40.640.10 113 372 2.7E-128 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_24400 a4fb5d348a2475b7eca1b94e5b7ce015 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 12-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 ABD1_04260 6fa6b08d4ea350dde8cbd45cc37b68b5 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 3.7E-62 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABD1_04260 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 1.7E-65 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABD1_04260 6fa6b08d4ea350dde8cbd45cc37b68b5 173 SUPERFAMILY SSF55068 1 163 1.05E-73 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABD1_04260 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 37.498 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABD1_04260 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Gene3D G3DSA:3.30.1060.10 1 159 1.8E-72 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 Gene3D G3DSA:2.60.120.620 1 178 1.0E-43 T 12-10-2018 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 Gene3D G3DSA:4.10.860.20 180 227 2.2E-21 T 12-10-2018 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 3.2E-12 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 SUPERFAMILY SSF51197 4 179 3.5E-6 T 12-10-2018 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.517 T 12-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 ABD1_04460 ae3c2a08c3fa42c00a8c97a680ef08b0 227 SMART SM00702 2 177 9.9E-21 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 PIRSF PIRSF036565 1 549 2.0E-193 T 12-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52518 359 541 1.06E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52518 5 179 5.89E-39 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.970 1 180 1.0E-70 T 12-10-2018 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.970 350 543 3.1E-58 T 12-10-2018 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 526 3.8E-19 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.1220 188 345 4.2E-38 T 12-10-2018 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 307 8.0E-19 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 4.5E-32 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABD1_24370 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52467 180 339 2.45E-26 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_04690 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-40 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-40 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-40 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-40 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-40 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 Gene3D G3DSA:3.30.70.141 1 143 6.7E-62 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.791 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 SMART SM00562 3 140 1.8E-89 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 SUPERFAMILY SSF54919 1 141 1.44E-58 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_04690 de2c3136116fae84840107b5c18cf067 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.0E-56 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABD1_31190 72da70531288a7400353a5272102e6ae 183 SMART SM00530 14 69 6.3E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_31190 72da70531288a7400353a5272102e6ae 183 Gene3D G3DSA:2.60.120.10 94 183 8.6E-16 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_31190 72da70531288a7400353a5272102e6ae 183 SUPERFAMILY SSF51182 92 179 2.17E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_31190 72da70531288a7400353a5272102e6ae 183 Pfam PF01381 Helix-turn-helix 15 67 2.5E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_31190 72da70531288a7400353a5272102e6ae 183 Pfam PF07883 Cupin domain 113 177 1.1E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel ABD1_31190 72da70531288a7400353a5272102e6ae 183 SUPERFAMILY SSF47413 6 70 3.49E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_31190 72da70531288a7400353a5272102e6ae 183 Gene3D G3DSA:1.10.260.40 1 76 1.8E-19 T 12-10-2018 ABD1_28950 675274894902fa226ddb687e5c03e697 278 Gene3D G3DSA:1.10.12.10 220 278 1.1E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_28950 675274894902fa226ddb687e5c03e697 278 Gene3D G3DSA:3.90.226.10 14 219 7.2E-60 T 12-10-2018 ABD1_28950 675274894902fa226ddb687e5c03e697 278 SUPERFAMILY SSF52096 14 276 2.61E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_28950 675274894902fa226ddb687e5c03e697 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 276 1.0E-49 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 587 616 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 545 565 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 719 745 5.9E-68 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 Gene3D G3DSA:1.20.1440.90 305 392 3.9E-22 T 12-10-2018 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 Pfam PF00311 Phosphoenolpyruvate carboxylase 134 894 1.2E-279 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 547 559 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 894 18.637 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ABD1_33530 f516f5dbb561e2661e49c973ea04a06e 894 SUPERFAMILY SSF51621 6 894 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 Pfam PF02501 Type II secretion system (T2SS), protein I 42 103 1.7E-9 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 SUPERFAMILY SSF54523 42 108 1.52E-13 T 12-10-2018 ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 100 1.6E-14 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 Gene3D G3DSA:3.30.1300.30 33 120 5.5E-10 T 12-10-2018 ABD1_15720 2a3c3c1aa17a4791ae7beb9bc014c679 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.4E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_00310 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 78 131 2.0E-18 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_00310 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 Gene3D G3DSA:3.10.450.160 56 135 8.6E-14 T 12-10-2018 ABD1_00310 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 Pfam PF11776 Nickel/cobalt transporter regulator 83 132 2.3E-16 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_33700 64efc3aacf27e908f4dfab3b7ad9fd47 288 SUPERFAMILY SSF56281 39 246 7.56E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_33700 64efc3aacf27e908f4dfab3b7ad9fd47 288 Gene3D G3DSA:3.60.15.10 28 257 1.9E-21 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_33700 64efc3aacf27e908f4dfab3b7ad9fd47 288 SMART SM00849 41 222 3.7E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 Pfam PF01327 Polypeptide deformylase 5 153 1.3E-52 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 PRINTS PR01576 Peptide deformylase signature 102 120 1.2E-37 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-37 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 PRINTS PR01576 Peptide deformylase signature 90 101 1.2E-37 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 PRINTS PR01576 Peptide deformylase signature 121 150 1.2E-37 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 Gene3D G3DSA:3.90.45.10 1 168 6.6E-66 T 12-10-2018 IPR036821 Peptide deformylase superfamily ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 SUPERFAMILY SSF56420 3 165 4.58E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 PIRSF PIRSF004749 1 175 7.5E-58 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.308 T 12-10-2018 IPR023635 Peptide deformylase ABD1_01680 5dc33c3bb654fec51367ddd23e3aaf7d 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 1.0E-57 T 12-10-2018 IPR023635 Peptide deformylase ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 190 5.9E-38 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 Pfam PF02545 Maf-like protein 5 191 2.0E-37 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 21.991 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 PIRSF PIRSF006305 1 196 4.4E-38 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 SUPERFAMILY SSF52972 2 191 1.05E-49 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_15500 6735f8af2db98bd3c5e61127f25829f6 197 Gene3D G3DSA:3.90.950.10 4 196 3.0E-48 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_33900 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.8E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABD1_33900 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 1.3E-68 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 ABD1_33900 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 SUPERFAMILY SSF53271 7 173 2.62E-53 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_33900 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 Gene3D G3DSA:3.40.50.2020 2 175 3.7E-64 T 12-10-2018 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 Pfam PF03466 LysR substrate binding domain 97 304 8.2E-17 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:3.40.190.10 170 279 4.9E-61 T 12-10-2018 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:3.40.190.10 92 303 4.9E-61 T 12-10-2018 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 SUPERFAMILY SSF53850 90 305 9.96E-37 T 12-10-2018 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_09610 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 Gene3D G3DSA:3.40.50.720 187 423 7.2E-84 T 12-10-2018 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 420 6.1E-72 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 SMART SM00839 189 420 8.7E-89 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 Gene3D G3DSA:3.40.50.10860 43 186 8.3E-64 T 12-10-2018 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 220 240 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 98 112 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 2.8E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 168 1.0E-55 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 SUPERFAMILY SSF53223 8 189 4.48E-70 T 12-10-2018 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 SUPERFAMILY SSF51735 187 423 8.01E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 106 119 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABD1_05410 064c8d9dd9a33ab7e24ba01212b1df53 424 PIRSF PIRSF000185 8 423 1.3E-159 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABD1_22300 ff4494a82472192a6aa838c7703fcaa8 324 Gene3D G3DSA:2.40.110.10 94 174 1.7E-7 T 12-10-2018 ABD1_22300 ff4494a82472192a6aa838c7703fcaa8 324 SUPERFAMILY SSF56645 38 169 2.26E-7 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_07930 589007867031ebdea404a2808f863213 151 Pfam PF03358 NADPH-dependent FMN reductase 18 89 1.3E-13 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABD1_07930 589007867031ebdea404a2808f863213 151 SUPERFAMILY SSF52218 2 150 9.04E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_07930 589007867031ebdea404a2808f863213 151 Gene3D G3DSA:3.40.50.360 2 151 3.5E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:2.40.50.100 171 205 1.7E-19 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Pfam PF13533 Biotin-lipoyl like 5 53 5.9E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:1.10.287.470 140 170 1.7E-19 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 SUPERFAMILY SSF111369 74 134 3.66E-5 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Pfam PF13437 HlyD family secretion protein 171 281 1.2E-13 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:2.40.50.100 4 37 1.1E-11 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 SUPERFAMILY SSF111369 141 290 8.5E-8 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:2.40.30.170 206 292 1.7E-19 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:1.10.287.470 38 58 1.1E-11 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 SUPERFAMILY SSF111369 4 76 1.57E-6 T 12-10-2018 ABD1_16570 20787287d435ebac66500d14e426408d 299 Gene3D G3DSA:1.10.287.470 69 135 8.8E-11 T 12-10-2018 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 263 27.606 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PIRSF PIRSF000513 9 271 2.6E-72 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 SUPERFAMILY SSF53613 11 268 6.29E-49 T 12-10-2018 IPR029056 Ribokinase-like ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 Pfam PF02110 Hydroxyethylthiazole kinase family 17 258 1.3E-64 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 124 138 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 4.6E-24 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_20960 8b3b2eb369e6b1bc5283ebad4b437d78 275 Gene3D G3DSA:3.40.1190.20 1 271 4.0E-78 T 12-10-2018 IPR029056 Ribokinase-like ABD1_18870 198abd2abcf969cd4509caa2048f3f97 369 Pfam PF01425 Amidase 17 172 2.3E-61 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_18870 198abd2abcf969cd4509caa2048f3f97 369 Pfam PF01425 Amidase 229 358 4.8E-19 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_18870 198abd2abcf969cd4509caa2048f3f97 369 SUPERFAMILY SSF75304 17 367 2.88E-94 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_18870 198abd2abcf969cd4509caa2048f3f97 369 ProSitePatterns PS00571 Amidases signature. 94 125 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ABD1_18870 198abd2abcf969cd4509caa2048f3f97 369 Gene3D G3DSA:3.90.1300.10 12 368 1.3E-99 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 322 2.2E-48 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 Pfam PF06144 DNA polymerase III, delta subunit 20 181 8.8E-15 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:1.20.272.10 210 328 9.8E-22 T 12-10-2018 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 SUPERFAMILY SSF48019 208 324 6.97E-25 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:1.10.8.60 143 209 1.4E-10 T 12-10-2018 ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 SUPERFAMILY SSF52540 10 206 3.63E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_05080 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:3.40.50.300 7 134 6.3E-25 T 12-10-2018 ABD1_32800 eaa75f8b29e38bb37d8d05b18c7dd933 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 56 280 1.9E-68 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABD1_32800 eaa75f8b29e38bb37d8d05b18c7dd933 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 42.882 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 ABD1_32800 eaa75f8b29e38bb37d8d05b18c7dd933 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 4.3E-60 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABD1_14210 3a90f6ee96e3ce5fcfac0945aa8b6c26 395 Gene3D G3DSA:1.20.1250.20 2 389 4.4E-29 T 12-10-2018 ABD1_14210 3a90f6ee96e3ce5fcfac0945aa8b6c26 395 SUPERFAMILY SSF103473 7 391 5.89E-30 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_14210 3a90f6ee96e3ce5fcfac0945aa8b6c26 395 Pfam PF07690 Major Facilitator Superfamily 217 391 2.1E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 SUPERFAMILY SSF47203 248 397 1.34E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 354 373 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 236 4.2E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Gene3D G3DSA:1.20.140.10 250 403 1.7E-39 T 12-10-2018 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 136 1.5E-34 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Gene3D G3DSA:1.10.540.10 6 138 1.5E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 394 6.9E-27 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 Gene3D G3DSA:2.40.110.10 139 248 2.6E-37 T 12-10-2018 ABD1_06670 6088c25d9fdc36d11657ba369986c9dd 403 SUPERFAMILY SSF56645 11 247 2.36E-78 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 Gene3D G3DSA:1.20.1050.10 88 225 1.7E-14 T 12-10-2018 ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 SUPERFAMILY SSF47616 78 225 2.54E-16 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 79 5.2E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 SUPERFAMILY SSF52833 3 104 1.21E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 Gene3D G3DSA:3.40.30.10 1 87 1.2E-17 T 12-10-2018 ABD1_20880 2d3cb81a2ec7bdabf1b8ba2cf468ae7b 228 Pfam PF14497 Glutathione S-transferase, C-terminal domain 148 225 1.0E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_29090 a8f1d5d41d28ea7b58552fb4f83fac56 81 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.6E-26 T 12-10-2018 IPR021250 Protein of unknown function DUF2789 ABD1_29090 a8f1d5d41d28ea7b58552fb4f83fac56 81 Gene3D G3DSA:1.10.10.1130 1 79 6.5E-28 T 12-10-2018 ABD1_27810 81135b014f4d674a4eef82b8d0927925 452 Pfam PF00860 Permease family 26 416 2.4E-99 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABD1_27810 81135b014f4d674a4eef82b8d0927925 452 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 446 6.1E-123 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABD1_27810 81135b014f4d674a4eef82b8d0927925 452 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 2.7E-127 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 ABD1_27810 81135b014f4d674a4eef82b8d0927925 452 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABD1_13320 748bbecb2b3e2980f4558ed5de3fca5c 264 PIRSF PIRSF001365 1 264 1.1E-45 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_13320 748bbecb2b3e2980f4558ed5de3fca5c 264 SMART SM01130 3 253 3.9E-11 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_13320 748bbecb2b3e2980f4558ed5de3fca5c 264 Gene3D G3DSA:3.20.20.70 1 264 8.6E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_13320 748bbecb2b3e2980f4558ed5de3fca5c 264 Pfam PF00701 Dihydrodipicolinate synthetase family 16 197 1.7E-20 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_13320 748bbecb2b3e2980f4558ed5de3fca5c 264 SUPERFAMILY SSF51569 1 224 6.18E-36 T 12-10-2018 ABD1_07760 63bcc5454b56e7832b15e4a5e7edf539 148 Pfam PF01476 LysM domain 99 147 6.0E-14 T 12-10-2018 IPR018392 LysM domain ABD1_07760 63bcc5454b56e7832b15e4a5e7edf539 148 SUPERFAMILY SSF54106 97 147 3.79E-8 T 12-10-2018 ABD1_07760 63bcc5454b56e7832b15e4a5e7edf539 148 Gene3D G3DSA:3.10.350.10 98 146 2.9E-15 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_07760 63bcc5454b56e7832b15e4a5e7edf539 148 SMART SM00257 98 147 9.1E-14 T 12-10-2018 IPR018392 LysM domain ABD1_07760 63bcc5454b56e7832b15e4a5e7edf539 148 Pfam PF04972 BON domain 35 90 4.7E-8 T 12-10-2018 IPR007055 BON domain ABD1_16090 869a67f21a03d2b78048c4ee4f33196f 310 Pfam PF04261 Dyp-type peroxidase family 7 303 1.2E-76 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABD1_16090 869a67f21a03d2b78048c4ee4f33196f 310 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 13 303 7.1E-73 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABD1_16090 869a67f21a03d2b78048c4ee4f33196f 310 SUPERFAMILY SSF54909 4 307 4.11E-98 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_03470 3bc28a60d47e95bdb6f6e0735376a0d1 85 Gene3D G3DSA:3.30.110.40 2 85 5.9E-28 T 12-10-2018 IPR036868 TusA-like domain superfamily ABD1_03470 3bc28a60d47e95bdb6f6e0735376a0d1 85 SUPERFAMILY SSF64307 6 85 8.37E-22 T 12-10-2018 IPR036868 TusA-like domain superfamily ABD1_03470 3bc28a60d47e95bdb6f6e0735376a0d1 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain ABD1_03470 3bc28a60d47e95bdb6f6e0735376a0d1 85 Pfam PF01206 Sulfurtransferase TusA 11 84 3.0E-24 T 12-10-2018 IPR001455 TusA-like domain ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SUPERFAMILY SSF48452 154 316 2.84E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Gene3D G3DSA:1.25.40.10 7 147 6.7E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Gene3D G3DSA:1.25.40.10 148 318 4.7E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Pfam PF13181 Tetratricopeptide repeat 429 459 0.19 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Pfam PF14559 Tetratricopeptide repeat 472 533 3.6E-6 T 12-10-2018 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SUPERFAMILY SSF48452 364 484 2.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SUPERFAMILY SSF48452 58 121 5.31E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Pfam PF13432 Tetratricopeptide repeat 227 280 0.0077 T 12-10-2018 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 358 391 2.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 155 188 6.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 323 356 330.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 189 222 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 89 122 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 SMART SM00028 461 494 7.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Gene3D G3DSA:1.25.40.10 406 543 9.1E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07870 eac8a90cdc079c27668811e3e1b097c5 545 Gene3D G3DSA:1.25.40.10 319 405 5.8E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Pfam PF17391 Urocanase N-terminal domain 13 139 3.3E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Hamap MF_00577 Urocanate hydratase [hutU]. 2 557 50.604 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 0.0 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Pfam PF17392 Urocanase C-terminal domain 353 547 4.7E-92 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Gene3D G3DSA:3.40.50.10730 143 350 2.0E-264 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 SUPERFAMILY SSF111326 8 556 3.14E-264 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Gene3D G3DSA:3.40.1770.10 18 543 2.0E-264 T 12-10-2018 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 Pfam PF01175 Urocanase Rossmann-like domain 142 350 3.2E-88 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33080 4056430474eec35f8d11d3398ec72fe4 558 PIRSF PIRSF001423 2 558 6.1E-297 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_15860 97b1f13a37945e083b74ff130d903662 502 Gene3D G3DSA:3.50.50.60 304 500 2.8E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_15860 97b1f13a37945e083b74ff130d903662 502 Pfam PF00743 Flavin-binding monooxygenase-like 12 347 7.7E-21 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 ABD1_15860 97b1f13a37945e083b74ff130d903662 502 SUPERFAMILY SSF51905 276 475 3.52E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_15860 97b1f13a37945e083b74ff130d903662 502 Gene3D G3DSA:3.50.50.60 1 209 1.7E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_15860 97b1f13a37945e083b74ff130d903662 502 SUPERFAMILY SSF51905 11 482 6.35E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_19590 8975242db5f055a05d3dd925d5e4f55b 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 4.7E-44 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related ABD1_19590 8975242db5f055a05d3dd925d5e4f55b 113 PIRSF PIRSF005894 2 112 4.0E-47 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 ABD1_19590 8975242db5f055a05d3dd925d5e4f55b 113 SUPERFAMILY SSF52833 7 108 2.5E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_19590 8975242db5f055a05d3dd925d5e4f55b 113 Gene3D G3DSA:3.40.30.10 6 109 4.8E-31 T 12-10-2018 ABD1_19590 8975242db5f055a05d3dd925d5e4f55b 113 Pfam PF00462 Glutaredoxin 21 85 4.5E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ABD1_02790 77f5ea0f3f14d9bde610328be74fb929 185 SUPERFAMILY SSF53474 2 181 5.08E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_02790 77f5ea0f3f14d9bde610328be74fb929 185 Gene3D G3DSA:3.40.50.1820 1 185 2.9E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_02790 77f5ea0f3f14d9bde610328be74fb929 185 Pfam PF06821 Serine hydrolase 5 180 1.7E-26 T 12-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 SUPERFAMILY SSF51735 9 190 6.65E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 187 1.2E-59 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 SUPERFAMILY SSF48179 419 496 3.32E-14 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Gene3D G3DSA:1.10.1040.50 194 492 5.3E-85 T 12-10-2018 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 SUPERFAMILY SSF48179 190 295 4.85E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 288 1.2E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 419 497 2.2E-12 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Gene3D G3DSA:3.30.750.190 294 411 5.3E-85 T 12-10-2018 ABD1_13520 8af3d58b92eb042dee76ad5154566edb 512 Gene3D G3DSA:3.40.50.720 6 193 6.7E-65 T 12-10-2018 ABD1_21150 0471bb9c328bff60728b195be37a26ea 151 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 4 128 7.4E-42 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABD1_21150 0471bb9c328bff60728b195be37a26ea 151 Gene3D G3DSA:3.40.50.300 1 148 8.5E-41 T 12-10-2018 ABD1_21150 0471bb9c328bff60728b195be37a26ea 151 SUPERFAMILY SSF52540 18 133 1.42E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21150 0471bb9c328bff60728b195be37a26ea 151 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 125 8.3E-39 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 Pfam PF00691 OmpA family 56 151 3.8E-23 T 12-10-2018 IPR006665 OmpA-like domain ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 57 79 1.1E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 87 102 1.1E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 102 118 1.1E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 SUPERFAMILY SSF103088 43 159 9.16E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 Gene3D G3DSA:3.30.1330.60 25 158 5.6E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_28780 cc5b3ab56c0b94760f3fb3b6b1514287 159 ProSitePatterns PS01068 OmpA-like domain. 89 133 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ABD1_18440 e9ed3536d919cfd178283f445f0a6aa4 153 Pfam PF01575 MaoC like domain 15 122 8.6E-27 T 12-10-2018 IPR002539 MaoC-like dehydratase domain ABD1_18440 e9ed3536d919cfd178283f445f0a6aa4 153 SUPERFAMILY SSF54637 8 149 2.18E-37 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_18440 e9ed3536d919cfd178283f445f0a6aa4 153 Gene3D G3DSA:3.10.129.10 3 151 3.5E-46 T 12-10-2018 ABD1_22510 ba009454444336c78d970159444b41ff 374 Gene3D G3DSA:3.30.1360.100 293 374 1.2E-7 T 12-10-2018 ABD1_22510 ba009454444336c78d970159444b41ff 374 Pfam PF12693 GspL periplasmic domain 227 369 2.0E-12 T 12-10-2018 IPR025691 GspL periplasmic domain ABD1_22510 ba009454444336c78d970159444b41ff 374 Pfam PF05134 Type II secretion system (T2SS), protein L 40 184 5.0E-8 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain ABD1_22510 ba009454444336c78d970159444b41ff 374 PIRSF PIRSF015761 7 374 8.9E-17 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 ABD1_22510 ba009454444336c78d970159444b41ff 374 Gene3D G3DSA:3.30.420.380 7 149 9.5E-7 T 12-10-2018 ABD1_22510 ba009454444336c78d970159444b41ff 374 SUPERFAMILY SSF53067 7 127 5.83E-10 T 12-10-2018 ABD1_09410 fa6e866037a416d7424eddb47ccb68a7 269 Gene3D G3DSA:1.20.1540.10 11 222 8.1E-36 T 12-10-2018 IPR035952 Rhomboid-like superfamily ABD1_09410 fa6e866037a416d7424eddb47ccb68a7 269 SUPERFAMILY SSF144091 17 220 1.57E-38 T 12-10-2018 ABD1_09410 fa6e866037a416d7424eddb47ccb68a7 269 Pfam PF01694 Rhomboid family 63 217 3.9E-35 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABD1_30170 178b9ecd80066468d685b97aff5ed7a2 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 3.2E-246 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ABD1_30170 178b9ecd80066468d685b97aff5ed7a2 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 59.316 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ABD1_30170 178b9ecd80066468d685b97aff5ed7a2 447 Gene3D G3DSA:3.75.10.20 1 447 7.1E-208 T 12-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ABD1_30170 178b9ecd80066468d685b97aff5ed7a2 447 Pfam PF04996 Succinylarginine dihydrolase 3 446 4.8E-221 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ABD1_30170 178b9ecd80066468d685b97aff5ed7a2 447 SUPERFAMILY SSF55909 3 447 1.47E-207 T 12-10-2018 ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 7.6E-122 T 12-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 SMART SM00382 27 214 9.2E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 SUPERFAMILY SSF52540 3 243 8.57E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 Pfam PF12857 TOBE-like domain 287 341 1.7E-7 T 12-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 SUPERFAMILY SSF50331 240 348 6.8E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 Pfam PF00005 ABC transporter 18 164 8.3E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_25220 1c348883ffdd06ea95caf49ac09f1a7c 353 Gene3D G3DSA:3.40.50.300 2 289 6.1E-82 T 12-10-2018 ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 409 430 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 Gene3D G3DSA:2.140.10.10 160 565 2.1E-113 T 12-10-2018 ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF01011 PQQ enzyme repeat 444 473 1.3E-5 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF01011 PQQ enzyme repeat 727 764 2.3E-7 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF13360 PQQ-like domain 217 394 1.8E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SUPERFAMILY SSF50998 162 798 2.09E-152 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 217 249 1.5E-4 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 414 463 62.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 721 754 0.0097 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 287 319 120.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 345 385 0.053 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 798 0.0 T 12-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 ABD1_27930 936bd9b0afedfa9b3f00434cec6b4604 801 Gene3D G3DSA:2.140.10.10 571 801 2.6E-34 T 12-10-2018 ABD1_06240 3463d26f2d412513d96f78d859195c81 145 SUPERFAMILY SSF46785 10 120 4.74E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06240 3463d26f2d412513d96f78d859195c81 145 SMART SM00347 31 130 9.9E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_06240 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_06240 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_06240 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_06240 3463d26f2d412513d96f78d859195c81 145 Gene3D G3DSA:1.10.10.10 1 144 1.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_06240 3463d26f2d412513d96f78d859195c81 145 Pfam PF01047 MarR family 38 96 5.2E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_15790 46fd9ecad23fbd8ab25f25f462e33c90 147 SUPERFAMILY SSF55961 5 145 6.93E-17 T 12-10-2018 ABD1_15790 46fd9ecad23fbd8ab25f25f462e33c90 147 Gene3D G3DSA:3.30.530.20 4 146 3.8E-15 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_15790 46fd9ecad23fbd8ab25f25f462e33c90 147 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 143 3.3E-8 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase ABD1_22260 510cfa0d303ac78d08086ab9c291f745 120 Pfam PF04076 Bacterial OB fold (BOF) protein 31 117 1.4E-23 T 12-10-2018 IPR005220 Bacterial OB-fold ABD1_22260 510cfa0d303ac78d08086ab9c291f745 120 SUPERFAMILY SSF101756 31 118 8.89E-25 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily ABD1_22260 510cfa0d303ac78d08086ab9c291f745 120 Gene3D G3DSA:2.40.50.200 16 120 1.4E-26 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily ABD1_21250 16631615c43235bc768576c4e95bb9de 382 Gene3D G3DSA:1.20.1250.20 1 194 5.2E-28 T 12-10-2018 ABD1_21250 16631615c43235bc768576c4e95bb9de 382 Gene3D G3DSA:1.20.1250.20 195 381 3.3E-18 T 12-10-2018 ABD1_21250 16631615c43235bc768576c4e95bb9de 382 SUPERFAMILY SSF103473 2 373 4.32E-58 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_21250 16631615c43235bc768576c4e95bb9de 382 Pfam PF07690 Major Facilitator Superfamily 6 333 6.8E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.7E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 2.7E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 2.7E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 140 5.5E-44 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 Gene3D G3DSA:1.10.1200.120 3 143 2.1E-41 T 12-10-2018 IPR036019 Gated mechanosensitive channel ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 141 23.567 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 SUPERFAMILY SSF81330 12 136 2.48E-34 T 12-10-2018 IPR036019 Gated mechanosensitive channel ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 3.0E-37 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ABD1_27790 ac3fba9dc036e2adfff370d4a29d3738 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 3.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 3.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 3.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 3.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 Pfam PF01979 Amidohydrolase family 124 453 1.3E-81 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.6E-55 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 12-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51338 2 176 1.51E-61 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 Gene3D G3DSA:3.20.20.140 128 566 9.0E-299 T 12-10-2018 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51556 129 566 4.98E-201 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.333 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 5.4E-300 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 Gene3D G3DSA:2.30.40.10 3 479 9.0E-299 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09690 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51338 423 476 9.5E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 SUPERFAMILY SSF50129 2 95 4.4E-34 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 SMART SM00883 3 94 2.6E-58 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 Gene3D G3DSA:2.30.33.40 1 96 5.2E-37 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 1.1E-34 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 26.928 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 4 19 5.6E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 26 47 5.6E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.6E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABD1_26180 d21e07e965ef486c6661b05e089f46e0 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ABD1_22370 d693afa192b450f22ffe1b7300da1105 502 SUPERFAMILY SSF52151 156 484 2.88E-46 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_22370 d693afa192b450f22ffe1b7300da1105 502 Pfam PF01734 Patatin-like phospholipase 157 339 1.9E-24 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABD1_22370 d693afa192b450f22ffe1b7300da1105 502 Gene3D G3DSA:3.40.1090.10 237 367 1.1E-13 T 12-10-2018 ABD1_22370 d693afa192b450f22ffe1b7300da1105 502 Pfam PF11815 Domain of unknown function (DUF3336) 15 149 5.6E-35 T 12-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 374 1.4E-17 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 3.8E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 3.8E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.8E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 3.8E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 SUPERFAMILY SSF55957 397 463 4.88E-13 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Gene3D G3DSA:3.40.120.10 176 253 2.0E-24 T 12-10-2018 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Gene3D G3DSA:3.30.310.50 378 468 5.0E-16 T 12-10-2018 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 SUPERFAMILY SSF53738 263 371 3.81E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 SUPERFAMILY SSF53738 159 259 5.49E-26 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 135 9.2E-30 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Gene3D G3DSA:3.40.120.10 256 376 8.4E-30 T 12-10-2018 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 SUPERFAMILY SSF53738 7 180 1.71E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Gene3D G3DSA:3.40.120.10 2 142 1.1E-37 T 12-10-2018 ABD1_08330 7ae2b5d1e587845f92930382e4eb20bf 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 256 3.2E-25 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABD1_30650 84ba3a8088d81e72526e887b2d8fc843 436 Pfam PF04932 O-Antigen ligase 182 311 3.8E-12 T 12-10-2018 IPR007016 O-antigen ligase-related ABD1_19340 943c710adb3e9e452fad252378103b0f 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 166 320 6.8E-18 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 Gene3D G3DSA:3.30.360.10 147 317 5.1E-128 T 12-10-2018 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 SMART SM00859 3 141 6.1E-61 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 SUPERFAMILY SSF51735 2 164 3.81E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_19340 943c710adb3e9e452fad252378103b0f 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 3.7E-39 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.578 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 5.0E-129 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 SUPERFAMILY SSF55347 149 317 3.16E-46 T 12-10-2018 ABD1_19340 943c710adb3e9e452fad252378103b0f 349 Gene3D G3DSA:3.40.50.720 4 335 5.1E-128 T 12-10-2018 ABD1_14860 a8aa95af75b9a8d905d7b0cb7b51e4c0 470 SUPERFAMILY SSF51679 8 437 2.09E-118 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_14860 a8aa95af75b9a8d905d7b0cb7b51e4c0 470 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 434 2.1E-155 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABD1_14860 a8aa95af75b9a8d905d7b0cb7b51e4c0 470 Gene3D G3DSA:3.20.20.30 5 457 9.2E-140 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_14860 a8aa95af75b9a8d905d7b0cb7b51e4c0 470 PIRSF PIRSF000337 6 448 2.2E-129 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABD1_14860 a8aa95af75b9a8d905d7b0cb7b51e4c0 470 Pfam PF00296 Luciferase-like monooxygenase 31 384 1.4E-57 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABD1_14900 41d9141ddd402d2425d05f0848f9e2ed 297 Gene3D G3DSA:3.40.190.10 27 272 2.6E-92 T 12-10-2018 ABD1_14900 41d9141ddd402d2425d05f0848f9e2ed 297 Gene3D G3DSA:3.40.190.10 131 226 2.6E-92 T 12-10-2018 ABD1_14900 41d9141ddd402d2425d05f0848f9e2ed 297 SUPERFAMILY SSF53850 1 270 3.24E-60 T 12-10-2018 ABD1_14900 41d9141ddd402d2425d05f0848f9e2ed 297 SMART SM00062 38 269 6.4E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14900 41d9141ddd402d2425d05f0848f9e2ed 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 267 8.1E-50 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_21030 94090765338b4f10c63d94dc59343047 478 PIRSF PIRSF006060 11 477 2.5E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_21030 94090765338b4f10c63d94dc59343047 478 Pfam PF13520 Amino acid permease 41 447 1.1E-39 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_21030 94090765338b4f10c63d94dc59343047 478 Gene3D G3DSA:1.20.1740.10 26 472 7.1E-56 T 12-10-2018 ABD1_21030 94090765338b4f10c63d94dc59343047 478 TIGRFAM TIGR00908 2A0305: ethanolamine permease 24 467 2.5E-177 T 12-10-2018 IPR004757 Ethanolamine permease ABD1_12570 2d2b3488449e563b2fc1b63180015247 153 PIRSF PIRSF018267 1 142 3.1E-54 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ABD1_12570 2d2b3488449e563b2fc1b63180015247 153 Gene3D G3DSA:3.40.960.10 21 153 3.0E-48 T 12-10-2018 ABD1_12570 2d2b3488449e563b2fc1b63180015247 153 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 119 2.1E-44 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ABD1_12570 2d2b3488449e563b2fc1b63180015247 153 SUPERFAMILY SSF52980 2 149 3.04E-53 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_12570 2d2b3488449e563b2fc1b63180015247 153 Pfam PF03852 DNA mismatch endonuclease Vsr 3 72 1.7E-33 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ABD1_14740 b478bb5c7ec32fa94f0091fd53a3de07 129 Gene3D G3DSA:3.30.429.10 2 129 2.2E-40 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily ABD1_14740 b478bb5c7ec32fa94f0091fd53a3de07 129 Pfam PF14552 Tautomerase enzyme 39 114 1.8E-24 T 12-10-2018 IPR037479 Tautomerase, MSAD family ABD1_14740 b478bb5c7ec32fa94f0091fd53a3de07 129 SUPERFAMILY SSF55331 4 121 4.64E-31 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 Gene3D G3DSA:3.10.310.10 181 374 7.9E-152 T 12-10-2018 ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 SUPERFAMILY SSF54506 2 182 8.63E-73 T 12-10-2018 ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 Gene3D G3DSA:3.10.310.10 11 388 7.9E-152 T 12-10-2018 ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 395 3.5E-233 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 SUPERFAMILY SSF54506 189 393 2.35E-78 T 12-10-2018 ABD1_27080 35818a1054894c7a9f9ced35bab096f2 395 Pfam PF04303 PrpF protein 6 391 5.9E-177 T 12-10-2018 IPR007400 PrpF protein ABD1_03900 5c76307e7015719071af54b3f561dde8 359 Gene3D G3DSA:3.40.718.10 2 359 2.8E-146 T 12-10-2018 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 SUPERFAMILY SSF53659 1 358 3.46E-121 T 12-10-2018 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.805 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 4.7E-138 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 1.8E-157 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABD1_03900 5c76307e7015719071af54b3f561dde8 359 SMART SM01329 4 354 2.4E-202 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABD1_32730 86c1c45f3f98cd3c664da1477f3413e6 384 SUPERFAMILY SSF53383 4 383 2.86E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_32730 86c1c45f3f98cd3c664da1477f3413e6 384 Gene3D G3DSA:3.40.640.10 41 280 2.6E-129 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_32730 86c1c45f3f98cd3c664da1477f3413e6 384 Gene3D G3DSA:3.90.1150.10 17 380 2.6E-129 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_32730 86c1c45f3f98cd3c664da1477f3413e6 384 Pfam PF00155 Aminotransferase class I and II 29 377 3.2E-62 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_27450 38cc42d6fc38a5cef6232815eff1a343 702 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 2 686 6.1E-226 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK ABD1_27450 38cc42d6fc38a5cef6232815eff1a343 702 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 2 686 1.4E-243 T 12-10-2018 IPR010019 Integral membrane protein, YccS ABD1_27450 38cc42d6fc38a5cef6232815eff1a343 702 Pfam PF12805 FUSC-like inner membrane protein yccS 46 327 5.4E-87 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal ABD1_27450 38cc42d6fc38a5cef6232815eff1a343 702 SUPERFAMILY SSF103473 364 515 8.11E-5 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_27450 38cc42d6fc38a5cef6232815eff1a343 702 Pfam PF13515 Fusaric acid resistance protein-like 389 508 5.3E-20 T 12-10-2018 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 Pfam PF14493 Helix-turn-helix domain 466 566 3.2E-18 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 SMART SM00382 12 168 8.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 SUPERFAMILY SSF52540 3 178 4.81E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 Gene3D G3DSA:3.40.50.300 184 398 1.9E-6 T 12-10-2018 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 Gene3D G3DSA:3.40.50.300 1 174 2.7E-32 T 12-10-2018 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 Pfam PF05970 PIF1-like helicase 196 297 1.4E-7 T 12-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 Pfam PF05970 PIF1-like helicase 11 182 3.1E-37 T 12-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 ABD1_20980 f4aa84f84fca6b237d0c79b7b64744a8 570 SUPERFAMILY SSF52540 125 411 1.56E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16180 38ccff9fed00891e823f620f837052f6 128 SUPERFAMILY SSF82649 1 125 3.92E-49 T 12-10-2018 ABD1_16180 38ccff9fed00891e823f620f837052f6 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.1E-68 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 ABD1_16180 38ccff9fed00891e823f620f837052f6 128 Gene3D G3DSA:3.90.1010.10 1 128 3.0E-58 T 12-10-2018 ABD1_16180 38ccff9fed00891e823f620f837052f6 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.2E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 ABD1_10110 407014c762ac2e614e1897cd5c5d7aac 133 SUPERFAMILY SSF52980 16 120 3.0E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_10110 407014c762ac2e614e1897cd5c5d7aac 133 Gene3D G3DSA:3.40.960.10 28 132 4.3E-10 T 12-10-2018 ABD1_10110 407014c762ac2e614e1897cd5c5d7aac 133 Pfam PF04480 Protein of unknown function (DUF559) 19 119 4.3E-7 T 12-10-2018 IPR007569 Protein of unknown function DUF559 ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 Gene3D G3DSA:3.40.50.720 1 250 2.1E-78 T 12-10-2018 ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 5.0E-66 T 12-10-2018 ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 SUPERFAMILY SSF51735 2 250 6.85E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18460 7d1b93dbd41578f60526f872d1c2dc52 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_25890 1c3986d232f186f4b5a5c7afa60b3d6f 325 SUPERFAMILY SSF54427 210 324 1.58E-7 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_25890 1c3986d232f186f4b5a5c7afa60b3d6f 325 SMART SM00978 194 324 1.0E-30 T 12-10-2018 IPR007379 Tim44-like domain ABD1_25890 1c3986d232f186f4b5a5c7afa60b3d6f 325 Pfam PF04280 Tim44-like domain 205 324 4.5E-11 T 12-10-2018 IPR007379 Tim44-like domain ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82714 182 272 1.96E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82866 296 497 2.22E-46 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 38 131 9.59E-29 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82866 810 1042 5.89E-43 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82714 726 813 6.15E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 569 665 3.19E-23 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1053 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 135 330 4.71E-25 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1440 673 873 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.1E-110 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:1.20.1640.10 517 1037 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1430 571 672 0.0 T 12-10-2018 ABD1_26830 6844f19bcf46d7b2487fb3909833594a 1058 Pfam PF00873 AcrB/AcrD/AcrF family 1 1040 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 Gene3D G3DSA:3.30.450.20 151 259 1.7E-7 T 12-10-2018 ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 Pfam PF00563 EAL domain 457 691 6.8E-24 T 12-10-2018 IPR001633 EAL domain ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 Gene3D G3DSA:3.20.20.450 454 700 1.8E-26 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 SUPERFAMILY SSF55785 141 227 7.85E-7 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 SUPERFAMILY SSF141868 457 691 1.1E-26 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_24120 c52a2d96105df5f0de68468156d17c18 702 SMART SM00052 451 697 2.2E-7 T 12-10-2018 IPR001633 EAL domain ABD1_11010 c15692b638d126794d2e5ff27383fb81 256 Pfam PF12680 SnoaL-like domain 13 102 4.1E-13 T 12-10-2018 IPR037401 SnoaL-like domain ABD1_11010 c15692b638d126794d2e5ff27383fb81 256 SUPERFAMILY SSF54427 5 104 4.77E-22 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_11010 c15692b638d126794d2e5ff27383fb81 256 SUPERFAMILY SSF54427 133 240 5.06E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_11010 c15692b638d126794d2e5ff27383fb81 256 Gene3D G3DSA:3.10.450.50 1 117 4.1E-29 T 12-10-2018 ABD1_11010 c15692b638d126794d2e5ff27383fb81 256 Gene3D G3DSA:3.10.450.50 129 255 7.0E-23 T 12-10-2018 ABD1_30220 553586d372211abeb8e65dec48a0b0cd 449 Pfam PF00324 Amino acid permease 2 444 2.0E-111 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_30220 553586d372211abeb8e65dec48a0b0cd 449 Gene3D G3DSA:1.20.1740.10 1 448 2.2E-62 T 12-10-2018 ABD1_30220 553586d372211abeb8e65dec48a0b0cd 449 PIRSF PIRSF006060 1 449 4.7E-72 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_30220 553586d372211abeb8e65dec48a0b0cd 449 ProSitePatterns PS00218 Amino acid permeases signature. 25 56 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_33020 d712293f76f2bd694f494f7ef5bff1c6 212 Gene3D G3DSA:1.10.150.240 22 86 8.2E-37 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_33020 d712293f76f2bd694f494f7ef5bff1c6 212 Gene3D G3DSA:3.40.50.1000 11 202 8.2E-37 T 12-10-2018 IPR023214 HAD superfamily ABD1_33020 d712293f76f2bd694f494f7ef5bff1c6 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 183 1.7E-37 T 12-10-2018 ABD1_33020 d712293f76f2bd694f494f7ef5bff1c6 212 SUPERFAMILY SSF56784 6 208 1.53E-41 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_33020 d712293f76f2bd694f494f7ef5bff1c6 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 177 1.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 370 6.4E-74 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 287 6.0E-28 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 Gene3D G3DSA:1.10.287.470 106 178 9.0E-70 T 12-10-2018 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 Gene3D G3DSA:2.40.30.170 61 294 9.0E-70 T 12-10-2018 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 Gene3D G3DSA:2.40.50.100 72 218 9.0E-70 T 12-10-2018 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 SUPERFAMILY SSF111369 63 287 7.45E-28 T 12-10-2018 ABD1_31580 db9798f0ee06071ebd71fc30513d8497 375 Gene3D G3DSA:2.40.420.20 295 367 9.0E-70 T 12-10-2018 ABD1_28810 3280b310a1ef12da33b9b96433aeb908 269 SMART SM00563 83 194 5.4E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_28810 3280b310a1ef12da33b9b96433aeb908 269 SUPERFAMILY SSF69593 30 266 1.44E-22 T 12-10-2018 ABD1_28810 3280b310a1ef12da33b9b96433aeb908 269 Pfam PF01553 Acyltransferase 72 186 3.8E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_13470 197d146d333a3eefad25500fd9425dba 251 Gene3D G3DSA:1.20.1260.10 1 251 2.0E-93 T 12-10-2018 IPR012347 Ferritin-like ABD1_13470 197d146d333a3eefad25500fd9425dba 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 251 1.7E-90 T 12-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ABD1_13470 197d146d333a3eefad25500fd9425dba 251 PIRSF PIRSF037834 1 251 4.5E-91 T 12-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ABD1_13470 197d146d333a3eefad25500fd9425dba 251 Pfam PF05138 Phenylacetic acid catabolic protein 5 251 1.0E-85 T 12-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ABD1_13470 197d146d333a3eefad25500fd9425dba 251 SUPERFAMILY SSF47240 5 245 8.11E-77 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Gene3D G3DSA:3.40.350.10 151 296 7.0E-34 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Pfam PF16188 C-terminal region of peptidase_M24 541 600 5.4E-23 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 SUPERFAMILY SSF53092 8 132 4.53E-10 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 152 309 1.1E-37 T 12-10-2018 ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Pfam PF00557 Metallopeptidase family M24 312 526 3.1E-44 T 12-10-2018 IPR000994 Peptidase M24 ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 134 2.2E-14 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 SUPERFAMILY SSF55920 307 566 1.7E-53 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Gene3D G3DSA:3.40.350.10 1 150 5.3E-42 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABD1_23510 920618feabf9b1fd4479074d86b3d90b 600 Gene3D G3DSA:3.90.230.10 304 600 8.9E-94 T 12-10-2018 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 Pfam PF03466 LysR substrate binding domain 91 279 1.6E-37 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 Gene3D G3DSA:1.10.10.10 1 86 4.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 Gene3D G3DSA:3.40.190.10 167 266 5.0E-83 T 12-10-2018 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 Gene3D G3DSA:3.40.190.10 91 301 5.0E-83 T 12-10-2018 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 SUPERFAMILY SSF53850 92 290 6.34E-38 T 12-10-2018 ABD1_25230 e1d38f28981e69430bc4a07b14d2d55c 307 SUPERFAMILY SSF46785 2 113 6.98E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 Gene3D G3DSA:3.90.380.10 28 446 2.2E-101 T 12-10-2018 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 Pfam PF00355 Rieske [2Fe-2S] domain 51 134 6.3E-23 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 199 392 1.7E-10 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 93 116 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 SUPERFAMILY SSF50022 19 163 7.99E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.3E-34 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 SUPERFAMILY SSF55961 169 456 6.99E-55 T 12-10-2018 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 Gene3D G3DSA:2.102.10.10 50 174 2.2E-101 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_17410 5bdf628b5496f56ab4c76c51830daa18 471 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 13 450 2.4E-289 T 12-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 SUPERFAMILY SSF48498 82 209 1.2E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 Pfam PF09209 Domain of unknown function (DUF1956) 86 205 3.3E-14 T 12-10-2018 IPR015292 Transcription regulator YbiH, C-terminal ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 SUPERFAMILY SSF46689 2 74 2.51E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 Gene3D G3DSA:1.10.357.10 5 215 4.5E-25 T 12-10-2018 ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_16560 ebb92d3d6fe219ababd512bbce98c215 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 Pfam PF00108 Thiolase, N-terminal domain 102 369 3.4E-48 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 Gene3D G3DSA:3.40.47.10 91 522 6.3E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 SUPERFAMILY SSF53901 398 521 1.83E-26 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 SUPERFAMILY SSF53901 102 375 4.71E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 Pfam PF02803 Thiolase, C-terminal domain 396 522 2.0E-28 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABD1_20580 4f06b75132f01d9083eef0e1c4e0c57e 522 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 104 521 5.5E-114 T 12-10-2018 IPR002155 Thiolase GO:0016747 ABD1_22380 25cc6a274c9c9291d5052c3e64884729 293 SUPERFAMILY SSF52540 46 201 3.42E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_22380 25cc6a274c9c9291d5052c3e64884729 293 Gene3D G3DSA:3.40.50.300 49 192 9.4E-11 T 12-10-2018 ABD1_22380 25cc6a274c9c9291d5052c3e64884729 293 Pfam PF05673 Protein of unknown function (DUF815) 36 283 6.0E-103 T 12-10-2018 IPR008533 Domain of unknown function DUF815 ABD1_16450 9bee059229d17efa9c3ea678456de961 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 6.4E-58 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABD1_16450 9bee059229d17efa9c3ea678456de961 172 SUPERFAMILY SSF52540 3 169 2.55E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16450 9bee059229d17efa9c3ea678456de961 172 PIRSF PIRSF006135 1 171 4.1E-54 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABD1_16450 9bee059229d17efa9c3ea678456de961 172 Gene3D G3DSA:3.40.50.300 2 169 1.2E-53 T 12-10-2018 ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 Gene3D G3DSA:3.40.50.1240 1 193 1.7E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 PIRSF PIRSF000709 1 130 1.4E-5 T 12-10-2018 ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 PIRSF PIRSF000709 81 161 8.4 T 12-10-2018 ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 SUPERFAMILY SSF53254 1 164 6.16E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 164 3.6E-28 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_13620 e11fe3c56f0f693c09a04f549372280b 193 SMART SM00855 2 158 2.5E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 SUPERFAMILY SSF51306 144 220 6.63E-11 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 Pfam PF01381 Helix-turn-helix 12 55 8.2E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 Gene3D G3DSA:1.10.260.40 7 63 5.5E-10 T 12-10-2018 ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 Pfam PF00717 Peptidase S24-like 152 208 1.5E-6 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 Gene3D G3DSA:2.10.109.10 105 231 6.1E-8 T 12-10-2018 ABD1_11310 4c3dfe50359275d8215b1ccf01cce060 243 SUPERFAMILY SSF47413 6 56 5.07E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_20860 a91ec4c82578dc45a5c98ebc389fd175 227 Gene3D G3DSA:3.40.50.720 3 208 2.3E-11 T 12-10-2018 ABD1_20860 a91ec4c82578dc45a5c98ebc389fd175 227 Pfam PF00106 short chain dehydrogenase 58 190 3.7E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_20860 a91ec4c82578dc45a5c98ebc389fd175 227 SUPERFAMILY SSF51735 63 191 4.45E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_29600 c33405a233cdbb3fa95feff001038950 250 SUPERFAMILY SSF54821 108 206 1.57E-40 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.4E-95 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 Gene3D G3DSA:3.30.300.20 18 107 2.6E-26 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_29600 c33405a233cdbb3fa95feff001038950 250 Gene3D G3DSA:3.30.1140.32 108 208 3.7E-45 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.283 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 SUPERFAMILY SSF54814 2 106 1.02E-35 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 Pfam PF07650 KH domain 39 110 6.4E-18 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29600 c33405a233cdbb3fa95feff001038950 250 SMART SM00322 60 125 4.4E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 Gene3D G3DSA:1.10.1660.10 1 129 4.7E-29 T 12-10-2018 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 SUPERFAMILY SSF46955 3 127 4.03E-30 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 Pfam PF13411 MerR HTH family regulatory protein 4 68 6.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_10620 cf172517fafdc0d6da0fa47081e405be 133 SMART SM00422 3 72 1.6E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 9.8E-149 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 SUPERFAMILY SSF55729 1 337 2.52E-129 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 Gene3D G3DSA:2.40.40.20 273 338 1.0E-13 T 12-10-2018 ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 2.9E-139 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 4.2E-157 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_30190 9c458ee40e171600f2c4cf913e107319 343 Gene3D G3DSA:3.40.630.30 1 272 7.1E-115 T 12-10-2018 ABD1_13860 2c99bb3081de702d83a85fef7aeab139 469 Pfam PF14518 Iron-containing redox enzyme 105 263 2.8E-28 T 12-10-2018 ABD1_13860 2c99bb3081de702d83a85fef7aeab139 469 Gene3D G3DSA:1.20.910.10 95 276 7.3E-10 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_13860 2c99bb3081de702d83a85fef7aeab139 469 SMART SM01236 136 234 7.2E-24 T 12-10-2018 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 224 561 2.6E-133 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 SUPERFAMILY SSF52794 116 215 7.15E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 Gene3D G3DSA:3.40.50.2300 104 215 1.2E-37 T 12-10-2018 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 117 200 1.1E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 Pfam PF02378 Phosphotransferase system, EIIC 243 505 3.5E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABD1_19690 df9c98a1b13724f4a90d04627bb47b03 572 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 118 203 3.1E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABD1_15580 4f34fd9bab9b268f2bdf308f937d5ca9 229 Gene3D G3DSA:3.90.550.10 1 226 9.8E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_15580 4f34fd9bab9b268f2bdf308f937d5ca9 229 Pfam PF00483 Nucleotidyl transferase 2 138 2.0E-18 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABD1_15580 4f34fd9bab9b268f2bdf308f937d5ca9 229 SUPERFAMILY SSF53448 1 223 3.15E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 SUPERFAMILY SSF52540 308 526 1.66E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Pfam PF12848 ABC transporter 223 296 7.7E-12 T 12-10-2018 IPR032781 ABC-transporter extension domain ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Gene3D G3DSA:3.40.50.300 4 278 6.5E-65 T 12-10-2018 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Gene3D G3DSA:3.40.50.300 281 551 1.4E-59 T 12-10-2018 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 SMART SM00382 343 513 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 SMART SM00382 28 230 2.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 SUPERFAMILY SSF52540 3 242 3.07E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Gene3D G3DSA:1.10.287.380 552 636 1.6E-21 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Pfam PF00005 ABC transporter 336 467 5.5E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Pfam PF00005 ABC transporter 19 183 2.9E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_04040 2d7771eb30447b4ad916e076bbae5a11 636 Pfam PF16326 ABC transporter C-terminal domain 562 631 1.7E-19 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ABD1_07130 824c87049403c03beb3130fab279785f 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.295 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ABD1_07130 824c87049403c03beb3130fab279785f 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 7.2E-23 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABD1_04070 801bf29063914a70d4875d0abfe35739 125 SUPERFAMILY SSF46785 13 115 1.95E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_04070 801bf29063914a70d4875d0abfe35739 125 Gene3D G3DSA:1.10.10.10 3 118 1.7E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_04070 801bf29063914a70d4875d0abfe35739 125 Pfam PF01638 HxlR-like helix-turn-helix 23 112 2.6E-37 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 Pfam PF03466 LysR substrate binding domain 109 293 1.8E-9 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 3.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 Gene3D G3DSA:3.40.190.10 182 276 1.4E-31 T 12-10-2018 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 SUPERFAMILY SSF53850 109 304 1.19E-22 T 12-10-2018 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 Gene3D G3DSA:3.40.190.10 102 300 1.4E-31 T 12-10-2018 ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 Gene3D G3DSA:1.10.10.10 12 100 8.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18950 0ad5ca7194a8f702d8382c43b90d1295 306 SUPERFAMILY SSF46785 15 97 7.26E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 SUPERFAMILY SSF52540 42 210 9.61E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 14 224 7.2E-23 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 252 470 4.5E-78 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 Gene3D G3DSA:3.40.50.300 3 222 2.3E-41 T 12-10-2018 ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 SUPERFAMILY SSF52540 280 470 3.81E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03260 8416b8d6162ca5bdc02bf7271b0427dd 472 Gene3D G3DSA:3.40.50.300 223 472 2.6E-93 T 12-10-2018 ABD1_15670 b6c1bb9744aea18dbf4014624feca37f 311 Gene3D G3DSA:3.40.50.300 2 156 2.7E-43 T 12-10-2018 ABD1_15670 b6c1bb9744aea18dbf4014624feca37f 311 SUPERFAMILY SSF52540 10 196 2.01E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15670 b6c1bb9744aea18dbf4014624feca37f 311 Pfam PF13177 DNA polymerase III, delta subunit 12 158 4.0E-36 T 12-10-2018 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 2.9E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 SUPERFAMILY SSF53383 116 492 5.27E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 Gene3D G3DSA:1.10.10.10 13 93 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 Pfam PF00155 Aminotransferase class I and II 164 353 1.4E-14 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 SMART SM00345 27 86 7.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 Gene3D G3DSA:3.40.640.10 122 484 1.4E-107 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_14180 ef8c4ae2e71dd99729e8b7e454c70e06 496 SUPERFAMILY SSF46785 20 88 1.12E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_05770 7ce2773c5c807c655a0a984dabc20d9f 117 Gene3D G3DSA:3.30.460.10 2 113 7.1E-37 T 12-10-2018 ABD1_05770 7ce2773c5c807c655a0a984dabc20d9f 117 SUPERFAMILY SSF81301 8 113 8.17E-37 T 12-10-2018 ABD1_05770 7ce2773c5c807c655a0a984dabc20d9f 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 109 7.3E-36 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABD1_05770 7ce2773c5c807c655a0a984dabc20d9f 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 110 24.564 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABD1_05770 7ce2773c5c807c655a0a984dabc20d9f 117 Pfam PF02410 Ribosomal silencing factor during starvation 15 109 2.7E-26 T 12-10-2018 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF51246 329 442 6.28E-41 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 1.3E-74 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.30.470.20 87 430 1.4E-146 T 12-10-2018 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 2.4E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.30.1490.20 131 201 1.4E-146 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.40.50.20 1 85 1.6E-34 T 12-10-2018 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF52440 1 113 1.08E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 SMART SM00878 334 440 5.2E-61 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.8E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF56059 83 345 3.36E-67 T 12-10-2018 ABD1_20370 1fcf11f7e5afe9f1453c61dd7433509a 456 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.2E-208 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ABD1_18560 ed98af05487ca3af19fadd9a910a8d1f 357 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 126 2.5E-17 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ABD1_18560 ed98af05487ca3af19fadd9a910a8d1f 357 SUPERFAMILY SSF51735 7 144 6.36E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18560 ed98af05487ca3af19fadd9a910a8d1f 357 Gene3D G3DSA:3.40.50.720 8 155 4.2E-30 T 12-10-2018 ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 Gene3D G3DSA:1.10.1040.20 156 256 1.2E-33 T 12-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 SUPERFAMILY SSF48179 159 257 3.74E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 Pfam PF10728 Domain of unknown function (DUF2520) 126 250 9.7E-30 T 12-10-2018 IPR018931 Domain of unknown function DUF2520 ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 88 3.4E-11 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 SUPERFAMILY SSF51735 2 157 5.11E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_12050 5cab56cd138103f9741b53edd41d0ecc 259 Gene3D G3DSA:3.40.50.720 1 155 2.4E-44 T 12-10-2018 ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 Pfam PF13229 Right handed beta helix region 121 253 2.2E-11 T 12-10-2018 IPR039448 Right handed beta helix domain ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 157 180 1.3 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 312 351 7000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 135 156 1000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 192 213 93.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 265 285 5600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 286 307 110.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SMART SM00710 243 263 3700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 Gene3D G3DSA:2.160.20.10 66 336 1.2E-13 T 12-10-2018 IPR012334 Pectin lyase fold ABD1_19030 f9c72b6d42c8a816c0b0cf5bb5cab280 483 SUPERFAMILY SSF51126 9 338 3.14E-31 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor ABD1_33720 484d59d8a558398d45784d1af26556e9 184 SUPERFAMILY SSF58014 36 131 2.48E-18 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 SUPERFAMILY SSF51064 138 183 8.5E-11 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 PRINTS PR00773 GrpE protein signature 138 153 1.8E-9 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 PRINTS PR00773 GrpE protein signature 163 182 1.8E-9 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 PRINTS PR00773 GrpE protein signature 63 79 1.8E-9 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 Pfam PF01025 GrpE 28 183 5.5E-35 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 ProSitePatterns PS01071 grpE protein signature. 141 182 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 Hamap MF_01151 Protein GrpE [grpE]. 3 184 16.127 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 Gene3D G3DSA:2.30.22.10 131 184 2.2E-14 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABD1_33720 484d59d8a558398d45784d1af26556e9 184 Gene3D G3DSA:3.90.20.20 2 130 1.3E-14 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 Pfam PF00361 Proton-conducting membrane transporter 143 431 2.7E-40 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 7.0E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 7.0E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 341 360 7.0E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 7.0E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03150 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 7.0E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_27950 5ccdc67b29d7d49357425c8c34562f38 372 SUPERFAMILY SSF89796 3 370 1.96E-108 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily ABD1_27950 5ccdc67b29d7d49357425c8c34562f38 372 Gene3D G3DSA:3.40.50.10540 5 333 5.9E-108 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily ABD1_27950 5ccdc67b29d7d49357425c8c34562f38 372 Pfam PF02515 CoA-transferase family III 5 361 2.0E-96 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 ABD1_27950 5ccdc67b29d7d49357425c8c34562f38 372 Gene3D G3DSA:3.30.1540.10 226 314 5.9E-108 T 12-10-2018 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 Pfam PF07687 Peptidase dimerisation domain 226 322 2.1E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 Pfam PF01546 Peptidase family M20/M25/M40 92 427 2.1E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 Gene3D G3DSA:3.40.630.10 34 416 3.8E-128 T 12-10-2018 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 PIRSF PIRSF005962 20 435 1.9E-111 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 35 419 6.5E-101 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 SUPERFAMILY SSF55031 224 331 4.32E-26 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 SUPERFAMILY SSF53187 22 430 1.57E-77 T 12-10-2018 ABD1_25410 beacbff3174b1e33a1312dc0ea745f9c 444 Gene3D G3DSA:3.30.70.360 221 336 3.8E-128 T 12-10-2018 ABD1_20420 26aaf4a7cbbbe7057dc6ee0520791537 446 Pfam PF03929 PepSY-associated TM region 15 381 1.9E-57 T 12-10-2018 IPR005625 PepSY-associated TM protein ABD1_16220 7dacdad146d1687aaf2ee63ee2ee032f 151 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 137 2.8E-31 T 12-10-2018 IPR008769 Poly granule associated ABD1_25670 73312dc151ca0e305ea1d743eac4116b 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 145 25.558 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 ABD1_25670 73312dc151ca0e305ea1d743eac4116b 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 142 8.0E-46 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Pfam PF13654 AAA domain 64 579 7.3E-172 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Gene3D G3DSA:3.40.50.300 45 232 3.6E-29 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Gene3D G3DSA:3.40.50.300 285 488 4.0E-55 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 689 795 1.9E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 SUPERFAMILY SSF54211 603 795 4.17E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 100 119 1.1E-10 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 1.1E-10 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 1.1E-10 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 1.1E-10 T 12-10-2018 ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 SUPERFAMILY SSF52540 68 590 7.6E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Gene3D G3DSA:3.30.230.10 582 821 7.9E-90 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_24170 4e2511990b9346cd867679ff6c0368e8 872 Gene3D G3DSA:1.10.8.60 489 576 4.8E-14 T 12-10-2018 ABD1_12400 19027231e058caceab2ca5c259069a1b 205 PIRSF PIRSF006324 1 205 4.5E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_12400 19027231e058caceab2ca5c259069a1b 205 Pfam PF01810 LysE type translocator 15 204 2.3E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.477 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 3.0E-27 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 235 8.0E-116 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 SUPERFAMILY SSF46785 257 330 2.38E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:3.40.50.300 18 181 3.5E-37 T 12-10-2018 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 3.6E-143 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 9.9E-30 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:1.10.8.60 182 256 6.5E-32 T 12-10-2018 ABD1_25400 830a246478dda2190b837c16e3f69b11 334 SUPERFAMILY SSF52540 20 252 1.96E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25400 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:1.10.10.10 257 333 4.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_25400 830a246478dda2190b837c16e3f69b11 334 SMART SM00382 51 178 9.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 SMART SM00411 6 96 5.0E-37 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 Gene3D G3DSA:4.10.520.10 6 99 9.4E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 2.1E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 2.1E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 2.1E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 SUPERFAMILY SSF47729 6 96 5.15E-28 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 98 5.0E-39 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 Pfam PF00216 Bacterial DNA-binding protein 6 96 1.1E-27 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABD1_15820 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 42 4.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:3.40.190.10 146 244 3.6E-55 T 12-10-2018 ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:1.10.10.10 1 62 3.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 Pfam PF03466 LysR substrate binding domain 75 271 2.8E-19 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 SUPERFAMILY SSF46785 2 59 4.9E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:3.40.190.10 66 268 3.6E-55 T 12-10-2018 ABD1_17230 a446465ebf1327a825f02a3161bc7ab1 276 SUPERFAMILY SSF53850 66 272 9.05E-38 T 12-10-2018 ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 SUPERFAMILY SSF48498 78 165 1.16E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 SUPERFAMILY SSF46689 3 69 1.9E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 Gene3D G3DSA:1.10.357.10 1 185 1.3E-35 T 12-10-2018 ABD1_20410 f91423889a0d670464866a0c9ba3754e 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.5E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 Pfam PF01144 Coenzyme A transferase 9 204 4.1E-39 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 SMART SM00882 9 206 4.7E-65 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 Gene3D G3DSA:3.40.1080.10 4 215 3.3E-85 T 12-10-2018 ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 4.8E-89 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 SUPERFAMILY SSF100950 8 212 3.32E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_19120 93963bce1da25fcafc0942da2f8e7c3a 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 40 272 37.784 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 Gene3D G3DSA:3.20.20.70 30 274 3.8E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 SUPERFAMILY SSF51569 37 272 4.03E-68 T 12-10-2018 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 ProSitePatterns PS01028 Dehydroquinase class I active site. 138 168 - T 12-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 40 269 3.1E-80 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_19040 7e4f900ab9dffec98dc0e1310d1c8e52 277 Pfam PF01487 Type I 3-dehydroquinase 43 269 1.8E-62 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 198 1.2E-4 T 12-10-2018 ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 5.5E-57 T 12-10-2018 ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 SUPERFAMILY SSF51735 3 240 2.76E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 Gene3D G3DSA:3.40.50.720 2 241 1.4E-74 T 12-10-2018 ABD1_04940 ba7f57d5e6abe901bf84f876e3ee1e8d 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.8E-122 T 12-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_28450 189c0c9377049a2e1a8e57c7c44d57a3 250 Pfam PF01522 Polysaccharide deacetylase 84 206 2.9E-27 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABD1_28450 189c0c9377049a2e1a8e57c7c44d57a3 250 SUPERFAMILY SSF88713 52 210 8.01E-34 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_28450 189c0c9377049a2e1a8e57c7c44d57a3 250 Gene3D G3DSA:3.20.20.370 30 242 7.5E-51 T 12-10-2018 ABD1_12870 fd03902783ea2acfa47c8b3f3936f01c 142 SUPERFAMILY SSF55729 1 112 4.4E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_12870 fd03902783ea2acfa47c8b3f3936f01c 142 Pfam PF00583 Acetyltransferase (GNAT) family 17 83 3.9E-5 T 12-10-2018 IPR000182 GNAT domain ABD1_12870 fd03902783ea2acfa47c8b3f3936f01c 142 Gene3D G3DSA:3.40.630.30 1 123 2.1E-9 T 12-10-2018 ABD1_01800 581fbe07cbcad5ba955830ca6f921843 419 Pfam PF13449 Esterase-like activity of phytase 74 393 4.8E-56 T 12-10-2018 IPR027372 Phytase-like domain ABD1_06870 42828ac951a107e2a5debff1909319a7 484 Gene3D G3DSA:3.20.20.70 100 472 5.1E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_06870 42828ac951a107e2a5debff1909319a7 484 SUPERFAMILY SSF102114 104 430 8.63E-34 T 12-10-2018 ABD1_06870 42828ac951a107e2a5debff1909319a7 484 Pfam PF13353 4Fe-4S single cluster domain 97 216 3.0E-6 T 12-10-2018 ABD1_06870 42828ac951a107e2a5debff1909319a7 484 Pfam PF04055 Radical SAM superfamily 105 247 2.5E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_06870 42828ac951a107e2a5debff1909319a7 484 TIGRFAM TIGR03978 rSAM_paired_1: His-Xaa-Ser system radical SAM maturase HxsB 19 481 3.5E-169 T 12-10-2018 IPR024023 His-Xaa-Ser system radical SAM maturase HxsB ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 Pfam PF14579 Helix-hairpin-helix motif 799 888 4.3E-28 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 SUPERFAMILY SSF89550 8 254 8.04E-13 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 988 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 Gene3D G3DSA:3.20.20.140 1 261 1.7E-76 T 12-10-2018 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 Pfam PF02811 PHP domain 6 163 9.6E-25 T 12-10-2018 IPR004013 PHP domain GO:0003824 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 725 4.5E-165 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 SUPERFAMILY SSF160975 823 873 4.32E-5 T 12-10-2018 ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 SMART SM00481 4 71 3.7E-14 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABD1_14630 a4e7b84a336f96f0754223bbb9f9ff7f 1187 Gene3D G3DSA:1.10.10.1600 428 511 5.4E-25 T 12-10-2018 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.58 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 SUPERFAMILY SSF143034 3 63 2.62E-21 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 Pfam PF01632 Ribosomal protein L35 3 60 1.6E-22 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 63 8.6E-25 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABD1_06020 8b503ba3d59b30ba0e6f04d453aa00db 64 Gene3D G3DSA:2.40.50.530 4 63 8.7E-22 T 12-10-2018 ABD1_19920 c500f35c57eab6438ee4be3a7274edc7 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 153 8.4E-56 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_19920 c500f35c57eab6438ee4be3a7274edc7 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 157 30.805 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_19920 c500f35c57eab6438ee4be3a7274edc7 161 SUPERFAMILY SSF54637 16 158 3.55E-45 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_19920 c500f35c57eab6438ee4be3a7274edc7 161 Gene3D G3DSA:3.10.129.10 11 158 9.9E-55 T 12-10-2018 ABD1_19920 c500f35c57eab6438ee4be3a7274edc7 161 Pfam PF07977 FabA-like domain 25 149 1.3E-31 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 Gene3D G3DSA:3.40.190.10 95 291 7.5E-54 T 12-10-2018 ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 Pfam PF03466 LysR substrate binding domain 93 294 7.0E-28 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 SUPERFAMILY SSF46785 6 87 1.92E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 Gene3D G3DSA:1.10.10.10 6 90 3.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 Gene3D G3DSA:3.40.190.10 166 267 7.5E-54 T 12-10-2018 ABD1_07980 8e9dcd0e78eca9f52f85995a10751155 326 SUPERFAMILY SSF53850 93 295 6.15E-34 T 12-10-2018 ABD1_02680 faf5d5fa19a178cd9c5df027ce0c4d8d 165 SUPERFAMILY SSF54637 11 158 4.48E-22 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_02680 faf5d5fa19a178cd9c5df027ce0c4d8d 165 Gene3D G3DSA:3.10.129.10 9 159 2.3E-30 T 12-10-2018 ABD1_02680 faf5d5fa19a178cd9c5df027ce0c4d8d 165 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 1.2E-17 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 Gene3D G3DSA:3.40.50.620 7 212 2.9E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.154 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 PIRSF PIRSF002936 1 302 5.6E-158 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 SUPERFAMILY SSF52402 6 210 4.93E-74 T 12-10-2018 ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 7.7E-65 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ABD1_09540 102548cc9a3d8ed5e72ea92c0101fbc8 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.5E-162 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABD1_08320 7210389c57fce45c6f3d8576f0fda0d9 150 SUPERFAMILY SSF51283 2 149 3.93E-54 T 12-10-2018 IPR036157 dUTPase-like superfamily ABD1_08320 7210389c57fce45c6f3d8576f0fda0d9 150 Gene3D G3DSA:2.70.40.10 1 150 1.7E-54 T 12-10-2018 IPR036157 dUTPase-like superfamily ABD1_08320 7210389c57fce45c6f3d8576f0fda0d9 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 33.565 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 ABD1_08320 7210389c57fce45c6f3d8576f0fda0d9 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 149 3.5E-49 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 ABD1_08320 7210389c57fce45c6f3d8576f0fda0d9 150 Pfam PF00692 dUTPase 15 148 5.8E-39 T 12-10-2018 IPR029054 dUTPase-like ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 Pfam PF03466 LysR substrate binding domain 89 288 1.3E-35 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 SUPERFAMILY SSF46785 1 83 3.17E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 Gene3D G3DSA:3.40.190.10 162 267 3.9E-76 T 12-10-2018 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 Gene3D G3DSA:3.40.190.10 93 292 3.9E-76 T 12-10-2018 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 Gene3D G3DSA:1.10.10.10 1 91 5.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 SUPERFAMILY SSF53850 89 292 5.34E-32 T 12-10-2018 ABD1_12250 6c3cc82b967164f6b311222ea9e665fc 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 SMART SM00846 2 162 5.7E-71 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 6.5E-34 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PIRSF PIRSF000149 1 340 1.3E-114 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 3.5E-51 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 SUPERFAMILY SSF51735 3 178 5.19E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 4.7E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 4.7E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 4.7E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 4.7E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 4.7E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 Gene3D G3DSA:3.40.50.720 3 336 3.5E-128 T 12-10-2018 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 SUPERFAMILY SSF55347 162 323 6.85E-57 T 12-10-2018 ABD1_11870 1117a787e1ebcb27a3ed2c50688a171e 341 Gene3D G3DSA:3.30.360.10 161 324 3.5E-128 T 12-10-2018 ABD1_01780 ba3413d4aae5e8eb01eec739f973d9cf 117 Pfam PF11158 Protein of unknown function (DUF2938) 2 113 1.4E-43 T 12-10-2018 IPR021329 Protein of unknown function DUF2938 ABD1_25430 b736a253f30067ff011c35987ec0cd15 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 39.011 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 ABD1_25430 b736a253f30067ff011c35987ec0cd15 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 3.3E-83 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 ABD1_25430 b736a253f30067ff011c35987ec0cd15 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 2.2E-38 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABD1_04000 619178186f905356c4d26abc05fea825 428 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 3.4E-117 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABD1_04000 619178186f905356c4d26abc05fea825 428 SUPERFAMILY SSF118215 8 412 9.55E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_04000 619178186f905356c4d26abc05fea825 428 Gene3D G3DSA:1.10.3860.10 1 426 5.3E-136 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABD1_04000 619178186f905356c4d26abc05fea825 428 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 43.525 T 12-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 ABD1_04000 619178186f905356c4d26abc05fea825 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.0E-50 T 12-10-2018 ABD1_04000 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.0E-50 T 12-10-2018 ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 SUPERFAMILY SSF48498 75 170 3.29E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 SUPERFAMILY SSF46689 2 77 4.94E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 Gene3D G3DSA:1.10.357.10 1 188 3.2E-32 T 12-10-2018 ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_13740 825d7a528ba610224334e042dd9a0e6b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_14470 3a71f31f65c298f1b50e5a055dc3c17f 489 Gene3D G3DSA:1.10.4160.10 8 486 7.7E-103 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily ABD1_14470 3a71f31f65c298f1b50e5a055dc3c17f 489 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 25 461 4.6E-91 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABD1_23420 7b48a38880b1158cd5c0c8c80c924c5a 252 Gene3D G3DSA:3.40.1390.30 98 223 1.0E-82 T 12-10-2018 ABD1_23420 7b48a38880b1158cd5c0c8c80c924c5a 252 Gene3D G3DSA:3.40.1390.30 7 239 1.0E-82 T 12-10-2018 ABD1_23420 7b48a38880b1158cd5c0c8c80c924c5a 252 SUPERFAMILY SSF102705 1 251 2.75E-78 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ABD1_23420 7b48a38880b1158cd5c0c8c80c924c5a 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 1.3E-63 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABD1_23420 7b48a38880b1158cd5c0c8c80c924c5a 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 250 6.3E-61 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABD1_08900 dc081e3b89bd94ce59d3f9a563837918 113 Gene3D G3DSA:3.10.50.40 2 113 1.2E-42 T 12-10-2018 ABD1_08900 dc081e3b89bd94ce59d3f9a563837918 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 4.9E-33 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_08900 dc081e3b89bd94ce59d3f9a563837918 113 SUPERFAMILY SSF54534 4 111 2.75E-40 T 12-10-2018 ABD1_30700 b3c5138b43f7a2f93986f5159f5e34da 295 Pfam PF10118 Predicted metal-dependent hydrolase 23 265 5.7E-76 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_30700 b3c5138b43f7a2f93986f5159f5e34da 295 PIRSF PIRSF007580 6 283 8.2E-69 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.3E-63 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 SUPERFAMILY SSF55021 2 76 4.58E-22 T 12-10-2018 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 SUPERFAMILY SSF55021 79 161 7.75E-27 T 12-10-2018 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-37 T 12-10-2018 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 8.9E-28 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 Pfam PF13710 ACT domain 13 73 5.4E-16 T 12-10-2018 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 Gene3D G3DSA:3.30.70.260 1 78 4.3E-34 T 12-10-2018 ABD1_05130 8ed8788e9c0149205ea8efd91017e3c1 163 Gene3D G3DSA:3.30.70.1150 83 163 9.4E-30 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 Gene3D G3DSA:1.10.1270.20 170 246 6.5E-30 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 102.247 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 238 1.8E-90 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 PIRSF PIRSF000386 1 246 4.0E-91 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 3.3E-56 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 Gene3D G3DSA:3.40.1280.10 1 169 5.1E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_30470 e31d5ab88da7d776c4b40795d99b9aba 246 SUPERFAMILY SSF75217 3 243 7.85E-96 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82866 822 1043 2.62E-51 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:1.20.1640.10 28 528 1.5E-288 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.70.1430 55 835 1.5E-288 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.2090.10 740 827 1.5E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82866 312 519 6.02E-37 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82714 206 288 9.02E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82714 739 823 3.01E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.70.1440 689 884 1.5E-288 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82693 168 346 1.27E-22 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Pfam PF00873 AcrB/AcrD/AcrF family 19 1040 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.2090.10 202 293 1.5E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 SUPERFAMILY SSF82693 55 141 4.97E-23 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 566 583 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 2.1E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 15 1047 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.70.1430 583 688 1.5E-288 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:3.30.70.1320 148 346 1.5E-288 T 12-10-2018 ABD1_30980 cf4116e9d0fd823665679de07d3ad629 1052 Gene3D G3DSA:1.20.1640.10 529 1038 1.5E-288 T 12-10-2018 ABD1_17860 91eae87ed0a4537ca4e07480277b3908 322 Gene3D G3DSA:3.40.1210.10 21 317 5.6E-44 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_17860 91eae87ed0a4537ca4e07480277b3908 322 SUPERFAMILY SSF64167 21 317 1.96E-41 T 12-10-2018 ABD1_17860 91eae87ed0a4537ca4e07480277b3908 322 Pfam PF01975 Survival protein SurE 23 242 1.4E-37 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABD1_28700 4369a834d79cce12f461e65688f5ea95 140 Pfam PF03061 Thioesterase superfamily 27 100 4.6E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_28700 4369a834d79cce12f461e65688f5ea95 140 SUPERFAMILY SSF54637 8 130 2.9E-32 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_28700 4369a834d79cce12f461e65688f5ea95 140 Gene3D G3DSA:3.10.129.10 1 140 2.2E-36 T 12-10-2018 ABD1_16890 24aceb7f1003d9a450eba1d0eb5ac15d 250 Gene3D G3DSA:1.20.910.10 1 249 9.2E-80 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_16890 24aceb7f1003d9a450eba1d0eb5ac15d 250 Pfam PF14518 Iron-containing redox enzyme 55 233 2.3E-21 T 12-10-2018 ABD1_16890 24aceb7f1003d9a450eba1d0eb5ac15d 250 SUPERFAMILY SSF48613 19 242 6.23E-48 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 Gene3D G3DSA:3.40.50.300 111 292 1.8E-61 T 12-10-2018 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 Pfam PF02954 Bacterial regulatory protein, Fis family 390 418 1.5E-4 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 Pfam PF00158 Sigma-54 interaction domain 126 288 1.6E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 Gene3D G3DSA:1.10.8.60 293 372 7.5E-22 T 12-10-2018 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 SMART SM00382 142 285 1.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 208 223 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 146 159 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 SUPERFAMILY SSF46689 378 423 7.62E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 Gene3D G3DSA:1.10.10.60 376 423 6.9E-6 T 12-10-2018 ABD1_16990 202ec8ee6952e3091ff3627987619dd8 423 SUPERFAMILY SSF52540 126 366 6.99E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_22320 846ce59630460535184b9416f7b1351e 465 PIRSF PIRSF006060 2 463 6.8E-69 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_22320 846ce59630460535184b9416f7b1351e 465 Pfam PF00324 Amino acid permease 17 430 3.3E-106 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_22320 846ce59630460535184b9416f7b1351e 465 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_22320 846ce59630460535184b9416f7b1351e 465 Gene3D G3DSA:1.20.1740.10 11 464 7.2E-62 T 12-10-2018 ABD1_15600 033db51cf5c4de89c9d708a82cbd20cd 260 Gene3D G3DSA:3.40.50.300 1 259 4.6E-81 T 12-10-2018 ABD1_15600 033db51cf5c4de89c9d708a82cbd20cd 260 PIRSF PIRSF009320 2 84 2.2E-15 T 12-10-2018 ABD1_15600 033db51cf5c4de89c9d708a82cbd20cd 260 PIRSF PIRSF009320 85 259 2.1E-9 T 12-10-2018 ABD1_15600 033db51cf5c4de89c9d708a82cbd20cd 260 SUPERFAMILY SSF52540 1 252 3.65E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_15600 033db51cf5c4de89c9d708a82cbd20cd 260 Pfam PF13614 AAA domain 3 177 3.4E-61 T 12-10-2018 IPR025669 AAA domain ABD1_06390 3c2a7888496ac3dd28357c8ed3ed970f 277 Pfam PF03412 Peptidase C39 family 63 197 3.8E-15 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ABD1_06390 3c2a7888496ac3dd28357c8ed3ed970f 277 Gene3D G3DSA:3.90.70.10 51 208 6.1E-29 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 589 2.8E-67 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Gene3D G3DSA:3.55.50.10 111 221 1.4E-45 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Gene3D G3DSA:2.40.50.230 432 541 1.2E-30 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Gene3D G3DSA:2.30.110.50 30 381 1.4E-45 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Pfam PF05954 Phage late control gene D protein (GPD) 43 385 3.1E-62 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 SUPERFAMILY SSF69255 442 535 9.68E-24 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 SUPERFAMILY SSF69279 24 203 1.87E-41 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 565 671 6.8E-38 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 845 4.5E-46 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 Gene3D G3DSA:3.30.1920.30 254 336 1.4E-45 T 12-10-2018 ABD1_00840 dc43d1e163576be05afc01ca0c5e2c27 937 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 591 4.8E-58 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 Gene3D G3DSA:3.40.50.150 8 203 2.2E-68 T 12-10-2018 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 1.7E-86 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 SUPERFAMILY SSF53335 10 268 2.61E-77 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 Gene3D G3DSA:1.10.8.100 207 270 5.0E-22 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 58.219 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 SMART SM00650 30 202 7.5E-83 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ABD1_28870 59ebd8e07a8a915c84be8b468b2ee44e 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 266 1.1E-66 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ABD1_23570 897a933c7d1527f355eb2bbce8cddc99 231 SUPERFAMILY SSF160443 143 219 2.75E-13 T 12-10-2018 IPR036063 Smr domain superfamily ABD1_23570 897a933c7d1527f355eb2bbce8cddc99 231 Gene3D G3DSA:3.30.1370.110 95 224 7.4E-33 T 12-10-2018 ABD1_23570 897a933c7d1527f355eb2bbce8cddc99 231 Pfam PF01713 Smr domain 143 219 8.5E-20 T 12-10-2018 IPR002625 Smr domain ABD1_23570 897a933c7d1527f355eb2bbce8cddc99 231 SMART SM00463 138 219 1.0E-8 T 12-10-2018 IPR002625 Smr domain ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Gene3D G3DSA:1.10.3090.10 157 399 3.0E-68 T 12-10-2018 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 441 33.824 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 246 2.2E-11 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Gene3D G3DSA:3.30.460.10 2 155 7.1E-46 T 12-10-2018 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 SUPERFAMILY SSF81891 157 384 5.1E-38 T 12-10-2018 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF01743 Poly A polymerase head domain 34 159 1.0E-29 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 407 2.6E-117 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 408 3.1E-29 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain ABD1_05890 8838d3b2fae9d518dd4a3ea375668781 487 SUPERFAMILY SSF81301 10 156 2.29E-33 T 12-10-2018 ABD1_10410 647e4aad5c72d1a240100b9536b0d471 1665 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 138 211 5.8E-25 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal ABD1_19270 2137868b5d6ec159d7c739cb16f2dbd5 305 SUPERFAMILY SSF53474 3 300 1.77E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19270 2137868b5d6ec159d7c739cb16f2dbd5 305 Gene3D G3DSA:3.40.50.1820 2 300 5.2E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19270 2137868b5d6ec159d7c739cb16f2dbd5 305 Pfam PF12697 Alpha/beta hydrolase family 23 289 2.8E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 SUPERFAMILY SSF55920 177 436 1.44E-84 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 Gene3D G3DSA:3.90.230.10 174 440 7.4E-99 T 12-10-2018 ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 9.2E-36 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 Pfam PF00557 Metallopeptidase family M24 182 413 3.5E-62 T 12-10-2018 IPR000994 Peptidase M24 ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 SUPERFAMILY SSF53092 3 176 8.11E-47 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 SMART SM01011 3 139 1.7E-52 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABD1_10570 c64ae2f5d7d240f403a28dd90a3550e8 440 Gene3D G3DSA:3.40.350.10 4 173 2.6E-51 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1139 1157 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.150.10.10 1283 1422 9.3E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 397 477 3.6E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 150 225 2.1E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 481 561 2.2E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 948 1025 2.8E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 565 645 7.3E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 65 142 7.3E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 233 309 9.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 649 729 1.0E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.60.40.10 313 393 1.6E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1486 1550 2.8E-8 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1310 1328 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Gene3D G3DSA:2.150.10.10 1119 1265 2.5E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 SUPERFAMILY SSF51120 1198 1430 3.35E-19 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 PRINTS PR00313 NodO calcium binding signature 1323 1332 8.0E-10 T 12-10-2018 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 PRINTS PR00313 NodO calcium binding signature 1122 1133 8.0E-10 T 12-10-2018 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 PRINTS PR00313 NodO calcium binding signature 1152 1160 8.0E-10 T 12-10-2018 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 PRINTS PR00313 NodO calcium binding signature 1134 1142 8.0E-10 T 12-10-2018 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 SUPERFAMILY SSF51120 1104 1247 1.96E-15 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1125 1141 0.0021 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1284 1294 53.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1296 1312 0.11 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1144 1159 0.03 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_18260 f622a18757c6959a2d2c552dd79aed1e 1563 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1315 1330 0.03 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 7.6E-88 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 Gene3D G3DSA:3.20.20.70 6 223 1.6E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 SUPERFAMILY SSF51366 4 219 1.99E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 PIRSF PIRSF001461 1 228 9.9E-102 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_06530 03ccf66d72b9666a25f2f73e44fc882b 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 2.5E-96 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABD1_31070 61c90432fc636aa22dbc4db4ca97dc50 706 Pfam PF00484 Carbonic anhydrase 543 701 1.1E-33 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABD1_31070 61c90432fc636aa22dbc4db4ca97dc50 706 SUPERFAMILY SSF53056 483 705 4.45E-52 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABD1_31070 61c90432fc636aa22dbc4db4ca97dc50 706 Gene3D G3DSA:3.40.1050.10 491 706 1.2E-54 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABD1_31070 61c90432fc636aa22dbc4db4ca97dc50 706 SMART SM00947 535 705 4.4E-48 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABD1_31070 61c90432fc636aa22dbc4db4ca97dc50 706 Pfam PF00916 Sulfate permease family 1 350 1.4E-51 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 57.122 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 5.8E-93 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 4.9E-172 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 Gene3D G3DSA:3.20.20.105 1 368 2.9E-171 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 3.1E-163 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_28550 f5cb9c86ec92e04d52b563afd932c047 377 SUPERFAMILY SSF51713 1 365 8.76E-163 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 SUPERFAMILY SSF53223 2 101 1.09E-31 T 12-10-2018 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 Gene3D G3DSA:3.40.50.10860 5 253 4.5E-79 T 12-10-2018 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 29.84 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 1.9E-77 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 1.9E-13 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 SUPERFAMILY SSF51735 102 259 2.05E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 6.0E-24 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABD1_29960 cb3a53a358f5532d0104e3042c671aca 262 Gene3D G3DSA:3.40.50.720 115 234 4.5E-79 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 SUPERFAMILY SSF51905 4 392 1.1E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 Pfam PF01494 FAD binding domain 4 357 9.6E-36 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 399 3.9E-109 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 Gene3D G3DSA:3.30.9.50 84 278 3.8E-94 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 9.6E-19 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 9.6E-19 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 9.6E-19 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.6E-19 T 12-10-2018 ABD1_10580 c9c1025efcac3098d182a4340f594b50 402 Gene3D G3DSA:3.50.50.60 5 347 3.8E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_14590 ad0b34afa3032b57674bd5148fdd3c74 609 SUPERFAMILY SSF53474 318 587 1.57E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_14590 ad0b34afa3032b57674bd5148fdd3c74 609 Gene3D G3DSA:3.40.50.1820 316 580 1.1E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.0E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.0E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 6.8E-133 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 Gene3D G3DSA:1.20.272.10 241 361 3.6E-31 T 12-10-2018 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.5E-40 T 12-10-2018 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 231 365 4.5E-27 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 SMART SM00382 36 177 3.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 SUPERFAMILY SSF48019 242 365 1.79E-26 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 SUPERFAMILY SSF52540 33 222 2.32E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 Gene3D G3DSA:3.40.50.300 12 176 1.3E-103 T 12-10-2018 ABD1_20520 3e58fffa317e8701a767a160c463b5f0 696 Gene3D G3DSA:1.10.8.60 7 239 1.3E-103 T 12-10-2018 ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52922 202 337 2.75E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.970 2 205 3.1E-82 T 12-10-2018 ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.920 206 339 2.7E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 5.7E-41 T 12-10-2018 IPR033248 Transketolase, C-terminal domain ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 1.9E-55 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 SMART SM00861 4 193 3.6E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_16930 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52518 4 205 7.5E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_01120 27e6ecc8f968a9dc517b092eba575ac8 302 SUPERFAMILY SSF53474 13 286 1.5E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01120 27e6ecc8f968a9dc517b092eba575ac8 302 Pfam PF00561 alpha/beta hydrolase fold 35 133 3.6E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_01120 27e6ecc8f968a9dc517b092eba575ac8 302 Gene3D G3DSA:3.40.50.1820 11 288 7.3E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_32500 4f4d799c327ac64cba6d8540d6946862 359 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 251 271 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABD1_32500 4f4d799c327ac64cba6d8540d6946862 359 Pfam PF00860 Permease family 8 299 1.2E-70 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABD1_14550 c6bb0ceb141be6e4851453a4a0e08316 324 Pfam PF01758 Sodium Bile acid symporter family 31 227 1.4E-61 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABD1_14550 c6bb0ceb141be6e4851453a4a0e08316 324 PIRSF PIRSF005508 1 324 2.4E-124 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ABD1_14550 c6bb0ceb141be6e4851453a4a0e08316 324 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 314 1.8E-122 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ABD1_14550 c6bb0ceb141be6e4851453a4a0e08316 324 Gene3D G3DSA:1.20.1530.20 1 320 1.5E-23 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_30130 423c4df22438766bed933cc7e69d506c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 386 402 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_30130 423c4df22438766bed933cc7e69d506c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 179 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_30130 423c4df22438766bed933cc7e69d506c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related ABD1_30130 423c4df22438766bed933cc7e69d506c 451 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 165 176 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABD1_30130 423c4df22438766bed933cc7e69d506c 451 Gene3D G3DSA:3.40.50.200 137 435 4.4E-50 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABD1_30130 423c4df22438766bed933cc7e69d506c 451 SUPERFAMILY SSF52743 142 432 1.1E-45 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABD1_30130 423c4df22438766bed933cc7e69d506c 451 Pfam PF00082 Subtilase family 160 404 8.8E-18 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABD1_30130 423c4df22438766bed933cc7e69d506c 451 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 387 397 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 Pfam PF00582 Universal stress protein family 3 145 3.0E-31 T 12-10-2018 IPR006016 UspA ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 124 146 3.7E-17 T 12-10-2018 IPR006015 Universal stress protein A ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 106 118 3.7E-17 T 12-10-2018 IPR006015 Universal stress protein A ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 3 21 3.7E-17 T 12-10-2018 IPR006015 Universal stress protein A ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 Gene3D G3DSA:3.40.50.620 1 146 2.7E-41 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 PIRSF PIRSF006276 1 147 5.1E-21 T 12-10-2018 IPR006015 Universal stress protein A ABD1_19730 1a6acf2d6251f4bda3840e0d47ace92c 147 SUPERFAMILY SSF52402 1 145 7.79E-40 T 12-10-2018 ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 808 0.0 T 12-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SUPERFAMILY SSF50998 172 793 4.97E-138 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 Pfam PF01011 PQQ enzyme repeat 737 763 2.8E-5 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 Pfam PF01011 PQQ enzyme repeat 451 481 3.1E-9 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 Gene3D G3DSA:2.140.10.10 164 580 2.5E-107 T 12-10-2018 ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 417 438 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 Pfam PF13360 PQQ-like domain 201 390 6.9E-8 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SMART SM00564 224 255 0.04 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SMART SM00564 352 393 0.018 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SMART SM00564 438 471 76.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SMART SM00564 730 763 7.7E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 SMART SM00564 663 702 29.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_19010 1847bd18e189b5ab29987cb7602d6338 809 Gene3D G3DSA:2.140.10.10 581 809 7.6E-38 T 12-10-2018 ABD1_00300 9ee15ae20c267e59806bbb0994666220 106 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 50 104 1.0E-12 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_00300 9ee15ae20c267e59806bbb0994666220 106 Gene3D G3DSA:3.10.450.160 28 106 2.8E-13 T 12-10-2018 ABD1_00300 9ee15ae20c267e59806bbb0994666220 106 Pfam PF11776 Nickel/cobalt transporter regulator 53 102 1.3E-13 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 Gene3D G3DSA:2.40.37.10 16 407 7.9E-145 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 Gene3D G3DSA:3.20.20.10 33 274 7.9E-145 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 SUPERFAMILY SSF50621 255 412 2.05E-48 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 5.6E-25 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 5.6E-25 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 5.6E-25 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 5.6E-25 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 5.6E-25 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.128 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 SUPERFAMILY SSF51419 25 281 2.22E-80 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 1.1E-21 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 5.3E-73 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ABD1_25850 5c7b66b920f6666e8dca5217e079f6f3 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 410 5.8E-159 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABD1_01350 9f0ad0cb18e8b5ef8173b7c2045f1306 262 Pfam PF01909 Nucleotidyltransferase domain 12 90 2.4E-6 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 ABD1_01350 9f0ad0cb18e8b5ef8173b7c2045f1306 262 PIRSF PIRSF000819 2 257 3.8E-50 T 12-10-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 ABD1_01350 9f0ad0cb18e8b5ef8173b7c2045f1306 262 SUPERFAMILY SSF81301 8 88 6.18E-11 T 12-10-2018 ABD1_01350 9f0ad0cb18e8b5ef8173b7c2045f1306 262 Gene3D G3DSA:3.30.460.10 4 99 6.2E-8 T 12-10-2018 ABD1_01350 9f0ad0cb18e8b5ef8173b7c2045f1306 262 Pfam PF13427 Domain of unknown function (DUF4111) 147 247 5.2E-20 T 12-10-2018 IPR025184 Domain of unknown function DUF4111 ABD1_24130 647b95718574800678da778caf91c565 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 SUPERFAMILY SSF143800 1 67 4.32E-26 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_24130 647b95718574800678da778caf91c565 74 Pfam PF01197 Ribosomal protein L31 1 66 4.8E-30 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 Gene3D G3DSA:2.30.170.50 1 70 3.3E-31 T 12-10-2018 ABD1_24130 647b95718574800678da778caf91c565 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.366 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 4.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 4.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_24130 647b95718574800678da778caf91c565 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 7.0E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_12320 f4019c6601019efefd071378ad4a374d 197 Pfam PF01810 LysE type translocator 12 189 2.0E-12 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 8.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 8.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 8.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 Gene3D G3DSA:3.40.50.720 9 262 4.0E-65 T 12-10-2018 ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 SUPERFAMILY SSF51735 13 268 3.31E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_11090 8c79b45c94b373718dc67b4545bf04f4 276 Pfam PF00106 short chain dehydrogenase 16 202 1.2E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_33970 1de660842e095c96e0ac12581a40ee4c 106 Pfam PF01809 Haemolytic domain 3 68 8.0E-30 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABD1_33970 1de660842e095c96e0ac12581a40ee4c 106 SMART SM01234 1 68 1.5E-44 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABD1_33970 1de660842e095c96e0ac12581a40ee4c 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 8.0E-22 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABD1_33970 1de660842e095c96e0ac12581a40ee4c 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.37 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABD1_33970 1de660842e095c96e0ac12581a40ee4c 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 72 3.0E-28 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABD1_00900 0d63a230b00e54c29eeca34eb78f9ca1 233 Pfam PF06210 Protein of unknown function (DUF1003) 116 215 5.6E-41 T 12-10-2018 IPR010406 Protein of unknown function DUF1003 ABD1_27250 ef581a4a217fe271d438f8160477835a 171 SUPERFAMILY SSF52972 1 167 3.2E-52 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_27250 ef581a4a217fe271d438f8160477835a 171 PIRSF PIRSF006305 1 171 3.3E-42 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_27250 ef581a4a217fe271d438f8160477835a 171 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 165 2.5E-43 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_27250 ef581a4a217fe271d438f8160477835a 171 Pfam PF02545 Maf-like protein 1 168 6.9E-48 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_27250 ef581a4a217fe271d438f8160477835a 171 Hamap MF_00528 Septum formation protein Maf [maf]. 1 171 22.247 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 ABD1_27250 ef581a4a217fe271d438f8160477835a 171 Gene3D G3DSA:3.90.950.10 1 171 2.1E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 1.6E-31 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.1E-39 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 SUPERFAMILY SSF53901 2 251 2.08E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 Gene3D G3DSA:3.40.47.10 258 408 1.6E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 Gene3D G3DSA:3.40.47.10 1 252 1.6E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 SMART SM00825 Beta-ketoacyl synthase 4 409 1.8E-13 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABD1_08100 d5e132d937d12ec694373eae4673ae2a 409 SUPERFAMILY SSF53901 213 407 1.73E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 ABD1_32740 e7329139dda635ffcb8740c9424be10b 455 PIRSF PIRSF006603 1 454 7.0E-105 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_32740 e7329139dda635ffcb8740c9424be10b 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 2.7E-73 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_32740 e7329139dda635ffcb8740c9424be10b 455 Pfam PF01554 MatE 252 413 5.7E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_32740 e7329139dda635ffcb8740c9424be10b 455 Pfam PF01554 MatE 23 184 1.8E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABD1_13660 8a9e724c5c22d5bb74a27a0a140f8eca 267 SUPERFAMILY SSF54637 164 251 5.96E-6 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_13660 8a9e724c5c22d5bb74a27a0a140f8eca 267 Gene3D G3DSA:3.10.129.90 39 262 4.3E-9 T 12-10-2018 ABD1_13660 8a9e724c5c22d5bb74a27a0a140f8eca 267 Pfam PF13622 Thioesterase-like superfamily 30 260 1.5E-24 T 12-10-2018 ABD1_28140 d33c9edbb0fd6af895f1582e9281c49b 349 Pfam PF12833 Helix-turn-helix domain 263 332 1.8E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_28140 d33c9edbb0fd6af895f1582e9281c49b 349 SUPERFAMILY SSF46689 294 340 9.41E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_28140 d33c9edbb0fd6af895f1582e9281c49b 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 47 207 3.2E-23 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_28140 d33c9edbb0fd6af895f1582e9281c49b 349 SMART SM00342 256 337 1.0E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_28140 d33c9edbb0fd6af895f1582e9281c49b 349 Gene3D G3DSA:1.10.10.60 232 347 1.6E-17 T 12-10-2018 ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 SUPERFAMILY SSF51419 4 222 1.83E-76 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 Gene3D G3DSA:3.20.20.10 1 229 1.3E-81 T 12-10-2018 IPR029066 PLP-binding barrel ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 Pfam PF01168 Alanine racemase, N-terminal domain 12 224 3.0E-27 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 PIRSF PIRSF004848 1 230 4.0E-75 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 30.939 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABD1_08440 33d80570784257f2686860a19fd4b5d3 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 4.7E-73 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABD1_15560 9d569bf900c837cdfe77d49b58d0dabb 817 Pfam PF03968 OstA-like protein 105 237 4.0E-10 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal ABD1_15560 9d569bf900c837cdfe77d49b58d0dabb 817 Pfam PF04453 Organic solvent tolerance protein 348 724 8.1E-83 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 ABD1_15560 9d569bf900c837cdfe77d49b58d0dabb 817 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 791 19.081 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 ABD1_19550 85d1876680853ae59d257d8716aaf4af 77 Gene3D G3DSA:1.25.40.10 2 77 6.9E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_19550 85d1876680853ae59d257d8716aaf4af 77 SUPERFAMILY SSF81901 20 73 2.35E-7 T 12-10-2018 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 SUPERFAMILY SSF46689 173 221 4.01E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 Gene3D G3DSA:1.10.10.60 167 274 1.6E-27 T 12-10-2018 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 SMART SM00342 187 269 8.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 SUPERFAMILY SSF46689 223 270 2.78E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 Pfam PF12833 Helix-turn-helix domain 194 270 5.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 SUPERFAMILY SSF51215 11 136 4.32E-24 T 12-10-2018 IPR037923 Transcription regulator HTH-like ABD1_22220 109c3838e57f36e8687c53f999a9f370 277 Pfam PF02311 AraC-like ligand binding domain 14 132 6.9E-24 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABD1_25610 921e3e6e30491377d31bdd722057e1bf 338 Gene3D G3DSA:3.90.226.10 82 289 4.6E-64 T 12-10-2018 ABD1_25610 921e3e6e30491377d31bdd722057e1bf 338 Gene3D G3DSA:3.40.1750.20 186 252 4.6E-64 T 12-10-2018 ABD1_25610 921e3e6e30491377d31bdd722057e1bf 338 SUPERFAMILY SSF52096 75 280 6.84E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_25610 921e3e6e30491377d31bdd722057e1bf 338 Pfam PF01343 Peptidase family S49 148 297 8.4E-38 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ABD1_25610 921e3e6e30491377d31bdd722057e1bf 338 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 81 292 3.6E-48 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 ABD1_29680 22ade20497e7be3ba4e0daf43a463840 242 SUPERFAMILY SSF52317 30 218 5.45E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_29680 22ade20497e7be3ba4e0daf43a463840 242 Pfam PF00117 Glutamine amidotransferase class-I 48 193 4.5E-16 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_29680 22ade20497e7be3ba4e0daf43a463840 242 Gene3D G3DSA:3.40.50.880 5 241 4.2E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_06840 7f3405e8a486da4323afb51af1eec73c 163 SUPERFAMILY SSF50475 6 159 1.47E-45 T 12-10-2018 ABD1_06840 7f3405e8a486da4323afb51af1eec73c 163 Gene3D G3DSA:2.30.110.10 1 162 5.3E-45 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_06840 7f3405e8a486da4323afb51af1eec73c 163 Pfam PF01613 Flavin reductase like domain 11 158 8.5E-35 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_06840 7f3405e8a486da4323afb51af1eec73c 163 SMART SM00903 11 156 5.3E-53 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 Pfam PF12697 Alpha/beta hydrolase family 385 601 2.4E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 SUPERFAMILY SSF53474 379 610 3.3E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 SUPERFAMILY SSF51735 12 289 2.86E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 Gene3D G3DSA:3.40.50.1820 354 619 2.1E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 218 1.1E-18 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_01240 174d3c793ad39eb403a3c6f5de7d7e5f 621 Gene3D G3DSA:3.40.50.720 13 307 3.2E-36 T 12-10-2018 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 8.6E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 Gene3D G3DSA:3.40.710.10 17 271 9.4E-85 T 12-10-2018 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 1.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 1.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 1.4E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 SMART SM00936 273 363 3.4E-33 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 SUPERFAMILY SSF69189 273 365 1.29E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 252 1.1E-77 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 Gene3D G3DSA:2.60.410.10 273 363 1.8E-29 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABD1_24230 d515167a719dbaff94df5c134ea4971b 382 SUPERFAMILY SSF56601 4 273 5.64E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.3E-8 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 1.3E-8 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.3E-8 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 SUPERFAMILY SSF54523 13 84 3.92E-8 T 12-10-2018 ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 Gene3D G3DSA:3.30.700.10 13 68 1.3E-6 T 12-10-2018 ABD1_15710 486d68bdbadc547d6ef5d7d470f7d48e 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_01230 6cf852d04defd573616206d37dfb22e6 424 SUPERFAMILY SSF56935 37 424 1.47E-11 T 12-10-2018 ABD1_12510 7ef37c1c67c6eac05eb4c5b62fac9885 62 Pfam PF09374 Predicted Peptidoglycan domain 21 62 9.7E-9 T 12-10-2018 IPR018537 Peptidoglycan binding domain ABD1_12510 7ef37c1c67c6eac05eb4c5b62fac9885 62 SUPERFAMILY SSF53955 19 62 2.53E-5 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_03020 60b92aca2c60b3b51cc3fd32a1ee2498 198 SUPERFAMILY SSF52540 1 196 3.62E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03020 60b92aca2c60b3b51cc3fd32a1ee2498 198 Pfam PF01121 Dephospho-CoA kinase 4 178 7.5E-65 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABD1_03020 60b92aca2c60b3b51cc3fd32a1ee2498 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 6.5E-57 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABD1_03020 60b92aca2c60b3b51cc3fd32a1ee2498 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.413 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABD1_03020 60b92aca2c60b3b51cc3fd32a1ee2498 198 Gene3D G3DSA:3.40.50.300 1 198 6.2E-69 T 12-10-2018 ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 Gene3D G3DSA:1.10.10.10 1 90 5.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 Gene3D G3DSA:3.40.190.290 91 296 3.2E-29 T 12-10-2018 ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 SUPERFAMILY SSF46785 2 107 1.41E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 Pfam PF03466 LysR substrate binding domain 85 283 3.7E-23 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_06740 2dd58e01666d95969ba9f312c2af6efe 309 SUPERFAMILY SSF53850 87 295 6.38E-24 T 12-10-2018 ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 Pfam PF13545 Crp-like helix-turn-helix domain 157 228 2.8E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 Gene3D G3DSA:1.10.10.10 154 234 2.6E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 Pfam PF00027 Cyclic nucleotide-binding domain 38 125 8.0E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 SMART SM00419 173 223 1.1E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 Gene3D G3DSA:2.60.120.10 10 149 1.6E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 SUPERFAMILY SSF46785 155 232 5.13E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 SUPERFAMILY SSF51206 14 143 7.07E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like ABD1_14790 afadfdb67edaf4cb2c216254086126df 235 SMART SM00100 19 140 2.3E-5 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain ABD1_22060 4404e18040237313843337470a777cb7 252 Pfam PF01966 HD domain 82 169 2.6E-6 T 12-10-2018 IPR006674 HD domain ABD1_22060 4404e18040237313843337470a777cb7 252 Gene3D G3DSA:1.10.3210.10 62 219 1.1E-9 T 12-10-2018 ABD1_22060 4404e18040237313843337470a777cb7 252 SUPERFAMILY SSF109604 63 182 6.02E-13 T 12-10-2018 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 SUPERFAMILY SSF69055 301 395 4.05E-31 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Gene3D G3DSA:3.40.50.720 1 151 7.8E-59 T 12-10-2018 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Gene3D G3DSA:1.10.1740.10 312 398 1.0E-32 T 12-10-2018 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 394 1.8E-149 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 6.2E-44 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 SUPERFAMILY SSF55347 127 274 6.21E-60 T 12-10-2018 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 45.77 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.8E-41 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 SUPERFAMILY SSF51735 3 151 2.8E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 2.9E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_19970 fb2b5cf18b929d7a3c6cd553e2a9708a 398 PIRSF PIRSF006205 2 397 4.3E-150 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABD1_11050 cc32d54b2916689908403c35100f2bfa 364 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.2E-134 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_11050 cc32d54b2916689908403c35100f2bfa 364 SUPERFAMILY SSF55729 1 338 2.72E-123 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_11050 cc32d54b2916689908403c35100f2bfa 364 Gene3D G3DSA:3.40.630.30 1 272 4.7E-111 T 12-10-2018 ABD1_11050 cc32d54b2916689908403c35100f2bfa 364 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 3.4E-146 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_11050 cc32d54b2916689908403c35100f2bfa 364 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.0E-130 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 SMART SM00345 20 81 2.9E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 Pfam PF07729 FCD domain 106 220 1.5E-6 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 Gene3D G3DSA:1.10.10.10 5 81 2.8E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 SMART SM00895 105 226 0.0064 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 SUPERFAMILY SSF46785 11 85 2.14E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 9.5E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 9.5E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 2.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 SUPERFAMILY SSF48008 103 233 1.41E-6 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_11000 3b82fa95846b0fb43bdf9ed56bb65878 239 Gene3D G3DSA:1.20.120.530 98 231 1.3E-6 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 19 270 2.2E-96 T 12-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 Pfam PF09339 IclR helix-turn-helix domain 27 76 2.2E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 SUPERFAMILY SSF55781 92 270 3.99E-41 T 12-10-2018 ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 SUPERFAMILY SSF46785 26 93 2.55E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 SMART SM00346 23 111 8.1E-17 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 Pfam PF01614 Bacterial transcriptional regulator 144 267 3.0E-42 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 Gene3D G3DSA:3.30.450.40 91 270 6.5E-50 T 12-10-2018 IPR029016 GAF-like domain superfamily ABD1_18960 2ebc7eec2e3a964a6f66dc2990f6d7d4 270 Gene3D G3DSA:1.10.10.10 8 88 1.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 Pfam PF02163 Peptidase family M50 10 436 5.7E-78 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 Gene3D G3DSA:2.30.42.10 219 309 2.2E-15 T 12-10-2018 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 Gene3D G3DSA:2.30.42.10 127 218 2.2E-21 T 12-10-2018 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 SMART SM00228 116 187 5.3E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 SMART SM00228 209 278 2.3E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 451 9.3E-114 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 SUPERFAMILY SSF50156 89 195 1.58E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 Pfam PF13180 PDZ domain 128 192 4.8E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 SUPERFAMILY SSF50156 205 288 1.58E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 ABD1_19960 6b7068c9e1ef3dce393bc4c70fdc3837 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 221 264 1.5E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 ABD1_33170 007f259827d3f545ba815629ace1b7cc 182 Gene3D G3DSA:3.10.180.10 1 175 3.2E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_33170 007f259827d3f545ba815629ace1b7cc 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 7.9E-19 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_33170 007f259827d3f545ba815629ace1b7cc 182 SUPERFAMILY SSF54593 2 140 2.42E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_33170 007f259827d3f545ba815629ace1b7cc 182 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 116 135 - T 12-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 SUPERFAMILY SSF53686 14 399 4.85E-149 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 PIRSF PIRSF001413 2 408 3.5E-166 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 1.3E-46 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 Gene3D G3DSA:3.40.50.1100 65 395 7.2E-185 T 12-10-2018 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 52.136 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 Gene3D G3DSA:3.40.50.1100 21 217 7.2E-185 T 12-10-2018 ABD1_28180 05c471412110764a86c4010c8ee9cc22 409 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 2.2E-190 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 Gene3D G3DSA:3.40.50.1970 1 188 2.4E-56 T 12-10-2018 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 Gene3D G3DSA:1.20.1090.10 190 394 5.6E-59 T 12-10-2018 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 SUPERFAMILY SSF56796 5 394 6.28E-111 T 12-10-2018 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABD1_26680 8e3bf7ec83ab87bcac740de1dccbcb76 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 385 1.1E-108 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABD1_09500 14c0aab14b725d4d9c2821d349052515 162 SUPERFAMILY SSF53474 2 95 5.68E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09500 14c0aab14b725d4d9c2821d349052515 162 Gene3D G3DSA:3.40.50.1820 1 161 5.7E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09500 14c0aab14b725d4d9c2821d349052515 162 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 88 1.8E-10 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 SMART SM00116 312 359 2.7E-8 T 12-10-2018 IPR000644 CBS domain ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 SMART SM00116 244 292 0.098 T 12-10-2018 IPR000644 CBS domain ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 Pfam PF04982 HPP family 54 173 2.5E-39 T 12-10-2018 IPR007065 HPP ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 Gene3D G3DSA:3.10.580.10 210 295 6.7E-11 T 12-10-2018 ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 Pfam PF00571 CBS domain 305 358 3.9E-12 T 12-10-2018 IPR000644 CBS domain ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 Pfam PF00571 CBS domain 239 290 7.5E-8 T 12-10-2018 IPR000644 CBS domain ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 SUPERFAMILY SSF103473 52 176 3.01E-5 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 Gene3D G3DSA:3.10.580.10 301 366 4.4E-13 T 12-10-2018 ABD1_30010 8e88ea2defff55bba914b3b1b687760e 366 SUPERFAMILY SSF54631 227 359 1.04E-28 T 12-10-2018 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF54736 52 123 3.49E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 1.1E-31 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.582 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 9.0E-14 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:1.20.5.710 2 52 2.3E-18 T 12-10-2018 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 6.9E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF48300 4 59 2.88E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:3.30.1390.10 53 123 1.9E-32 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABD1_02630 7fbe5791b194f177d8895deb865fa1b6 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.6E-46 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 461 2.6E-149 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 Pfam PF01235 Sodium:alanine symporter family 60 474 2.8E-150 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 370 392 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 325 343 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 430 450 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 96 118 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 230 249 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_27400 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 202 220 2.6E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABD1_25980 a5b6aa180871528550f17779d965ff9b 201 Pfam PF00881 Nitroreductase family 7 178 2.6E-30 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_25980 a5b6aa180871528550f17779d965ff9b 201 Gene3D G3DSA:3.40.109.10 1 197 1.0E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_25980 a5b6aa180871528550f17779d965ff9b 201 SUPERFAMILY SSF55469 1 196 1.57E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 9.5E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 Gene3D G3DSA:3.10.20.30 1 112 3.4E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_16140 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.2E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.2E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.2E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 3.7E-53 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ABD1_16140 134cc018c872972713a0fa49d341aee9 112 SUPERFAMILY SSF54292 6 108 1.76E-28 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_17760 c869df5ac966d505de0849967113f7f9 286 Gene3D G3DSA:3.40.50.720 1 276 3.9E-61 T 12-10-2018 ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 Pfam PF00106 short chain dehydrogenase 8 195 6.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17760 c869df5ac966d505de0849967113f7f9 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 0.0025 T 12-10-2018 ABD1_17760 c869df5ac966d505de0849967113f7f9 286 SUPERFAMILY SSF51735 1 265 1.27E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17760 c869df5ac966d505de0849967113f7f9 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_08110 6ef08f728d9e39e74a1ea4050b955c11 423 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 132 195 8.0E-4 T 12-10-2018 ABD1_08110 6ef08f728d9e39e74a1ea4050b955c11 423 Pfam PF12787 EcsC protein family 49 301 3.9E-20 T 12-10-2018 IPR024787 EcsC protein ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 Pfam PF13807 G-rich domain on putative tyrosine kinase 378 459 7.6E-31 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 515 718 1.6E-52 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 Pfam PF13614 AAA domain 545 692 1.3E-15 T 12-10-2018 IPR025669 AAA domain ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 Pfam PF02706 Chain length determinant protein 10 102 5.7E-21 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 SUPERFAMILY SSF52540 533 713 4.23E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_00490 583320ebd43a5fa8f5a58ce990941782 728 Gene3D G3DSA:3.40.50.300 453 726 2.3E-78 T 12-10-2018 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Gene3D G3DSA:1.10.287.130 770 867 7.8E-12 T 12-10-2018 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SMART SM00388 804 869 2.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Gene3D G3DSA:1.20.1730.10 38 525 3.2E-18 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SUPERFAMILY SSF55785 642 764 1.22E-10 T 12-10-2018 IPR035965 PAS domain superfamily ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 9.5E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Gene3D G3DSA:3.30.565.10 868 1027 3.5E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Gene3D G3DSA:3.40.50.2300 1040 1158 7.6E-17 T 12-10-2018 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Pfam PF00512 His Kinase A (phospho-acceptor) domain 804 869 7.0E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1024 3.8E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SUPERFAMILY SSF55874 860 1029 7.33E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SMART SM00387 913 1027 1.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Pfam PF00072 Response regulator receiver domain 1048 1153 5.7E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SUPERFAMILY SSF47384 792 869 1.43E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SUPERFAMILY SSF52172 1046 1156 2.13E-14 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Pfam PF12860 PAS fold 657 770 6.4E-43 T 12-10-2018 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 SMART SM00448 1046 1155 6.0E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_31970 55e3cf1692b2f58bd57ba125dd469545 1165 Gene3D G3DSA:3.30.450.20 639 769 3.1E-13 T 12-10-2018 ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 PIRSF PIRSF006118 1 175 7.3E-60 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 SUPERFAMILY SSF56784 10 171 2.17E-40 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 88 145 1.8E-9 T 12-10-2018 ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 164 4.2E-47 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 127 1.6E-13 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ABD1_12600 fa0b499243d44f0e14272496b6c77d9c 179 Gene3D G3DSA:3.40.50.1000 2 176 8.3E-52 T 12-10-2018 IPR023214 HAD superfamily ABD1_32240 9847ffa2e54765252e89ebdc1d66b6ee 230 SUPERFAMILY SSF51261 78 226 6.8E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_32240 9847ffa2e54765252e89ebdc1d66b6ee 230 Gene3D G3DSA:2.70.70.10 74 229 4.5E-45 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_32240 9847ffa2e54765252e89ebdc1d66b6ee 230 Pfam PF01551 Peptidase family M23 128 222 7.9E-32 T 12-10-2018 IPR016047 Peptidase M23 ABD1_09830 a634b7216b2608a1b989c4529bbb5ee1 369 Gene3D G3DSA:2.40.128.270 19 147 3.9E-13 T 12-10-2018 IPR038670 HslJ-like superfamily ABD1_09830 a634b7216b2608a1b989c4529bbb5ee1 369 Gene3D G3DSA:2.40.128.270 148 261 6.9E-12 T 12-10-2018 IPR038670 HslJ-like superfamily ABD1_09830 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF03724 META domain 160 254 9.5E-15 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ABD1_09830 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF03724 META domain 44 128 8.6E-17 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ABD1_09830 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF14302 Domain of unknown function (DUF4377) 277 361 4.5E-22 T 12-10-2018 IPR025485 Domain of unknown function DUF4377 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 Pfam PF00221 Aromatic amino acid lyase 10 469 9.1E-187 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 500 8.8E-221 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 Gene3D G3DSA:1.20.200.10 197 508 3.7E-128 T 12-10-2018 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 Gene3D G3DSA:1.10.275.10 1 196 6.4E-69 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 SUPERFAMILY SSF48557 3 505 4.24E-193 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABD1_33070 3abb83200b25db1a2499ab9a725471bc 512 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 44.937 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 Gene3D G3DSA:3.40.630.70 60 238 3.8E-56 T 12-10-2018 ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 1.3E-61 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 SUPERFAMILY SSF55729 5 227 5.83E-81 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 Gene3D G3DSA:2.30.210.20 1 59 4.8E-22 T 12-10-2018 ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 77.221 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABD1_08200 9df8a5781827053eb7a69756a9ae1de7 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.5E-52 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABD1_22420 970cf8e0e3a61b518ebe7b4d0a956af9 148 SUPERFAMILY SSF89095 3 147 2.62E-39 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABD1_22420 970cf8e0e3a61b518ebe7b4d0a956af9 148 Gene3D G3DSA:1.10.1510.10 1 91 2.3E-26 T 12-10-2018 ABD1_22420 970cf8e0e3a61b518ebe7b4d0a956af9 148 Pfam PF09424 Yqey-like protein 5 147 2.1E-50 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 ABD1_22420 970cf8e0e3a61b518ebe7b4d0a956af9 148 Gene3D G3DSA:1.10.10.410 92 148 3.1E-17 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF00364 Biotin-requiring enzyme 4 75 1.7E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 397 2.4E-177 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:2.40.50.100 1 102 7.9E-20 T 12-10-2018 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 168 395 6.2E-81 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF52777 170 397 5.78E-88 T 12-10-2018 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:4.10.320.10 103 152 2.5E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF51230 1 95 1.83E-24 T 12-10-2018 IPR011053 Single hybrid motif ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:3.30.559.10 166 398 9.9E-95 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF47005 111 151 4.97E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF02817 e3 binding domain 116 146 4.4E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABD1_26520 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABD1_21300 cb3d2a3e3cde11c6499cdacf122d01cb 1501 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1154 1501 3.0E-43 T 12-10-2018 IPR007452 Translocation and assembly module TamB ABD1_32180 03666f175e583e541d52305d7ac85353 265 SMART SM00849 32 229 1.1E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_32180 03666f175e583e541d52305d7ac85353 265 Pfam PF00753 Metallo-beta-lactamase superfamily 31 229 2.7E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_32180 03666f175e583e541d52305d7ac85353 265 Gene3D G3DSA:3.60.15.10 10 248 6.0E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_32180 03666f175e583e541d52305d7ac85353 265 SUPERFAMILY SSF56281 30 249 9.94E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_02760 01ce090cddaa6e8d23dcf0131f6e0e0b 234 Gene3D G3DSA:3.40.30.10 1 207 1.1E-69 T 12-10-2018 ABD1_02760 01ce090cddaa6e8d23dcf0131f6e0e0b 234 Pfam PF01323 DSBA-like thioredoxin domain 2 203 4.8E-45 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ABD1_02760 01ce090cddaa6e8d23dcf0131f6e0e0b 234 SUPERFAMILY SSF52833 1 206 1.33E-41 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_29330 4923535159d5abfb106c0e01dc14497f 731 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 311 721 9.4E-15 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ABD1_27480 8a3334a87a6c330ee5f6357b843aa3b7 261 Pfam PF02698 DUF218 domain 105 250 5.9E-28 T 12-10-2018 IPR003848 Domain of unknown function DUF218 ABD1_27480 8a3334a87a6c330ee5f6357b843aa3b7 261 Gene3D G3DSA:3.40.50.620 133 237 2.0E-9 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 SUPERFAMILY SSF52540 4 198 3.07E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 PIRSF PIRSF005624 1 203 7.9E-45 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 7 203 2.0E-101 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 Gene3D G3DSA:3.40.50.300 7 203 1.3E-45 T 12-10-2018 ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 2.9E-34 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABD1_09720 9b7b90a9a6d41b52a1b09726a24b3b8c 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 5 203 46.666 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 ABD1_09120 da8d240d1588f0e3d42a1d5615bd7893 373 SUPERFAMILY SSF103473 7 371 5.75E-56 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_09120 da8d240d1588f0e3d42a1d5615bd7893 373 Gene3D G3DSA:1.20.1250.20 3 372 9.1E-53 T 12-10-2018 ABD1_09120 da8d240d1588f0e3d42a1d5615bd7893 373 Pfam PF07690 Major Facilitator Superfamily 8 251 1.8E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 SUPERFAMILY SSF53850 90 293 5.43E-37 T 12-10-2018 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 SUPERFAMILY SSF46785 1 108 5.13E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 Gene3D G3DSA:1.10.10.10 1 90 2.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 Gene3D G3DSA:3.40.190.290 91 293 1.7E-43 T 12-10-2018 ABD1_26940 5fa9b5d4653bdb4890d323b569db6651 294 Pfam PF03466 LysR substrate binding domain 88 290 6.8E-40 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 Gene3D G3DSA:3.50.50.60 7 352 1.5E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 1.4E-13 T 12-10-2018 ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.4E-13 T 12-10-2018 ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 1.4E-13 T 12-10-2018 ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 SUPERFAMILY SSF51905 7 395 1.83E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 Gene3D G3DSA:3.30.9.30 38 288 1.5E-52 T 12-10-2018 ABD1_03210 323dca5e325a6562dceb8b25647a696d 437 Pfam PF01494 FAD binding domain 7 334 4.1E-22 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 147 155 - T 12-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 327 1.7E-144 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 Gene3D G3DSA:3.40.190.10 116 326 2.2E-130 T 12-10-2018 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 Pfam PF13531 Bacterial extracellular solute-binding protein 47 281 7.4E-43 T 12-10-2018 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 SUPERFAMILY SSF53850 21 328 7.48E-84 T 12-10-2018 ABD1_25180 67701f1a915a8d951f385e56c12722c9 335 Gene3D G3DSA:3.40.190.10 28 296 2.2E-130 T 12-10-2018 ABD1_22280 a4e4e8b0b5f9beada5641232c826f7d7 199 SUPERFAMILY SSF53335 6 154 2.61E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_22280 a4e4e8b0b5f9beada5641232c826f7d7 199 Pfam PF05401 Nodulation protein S (NodS) 15 142 1.2E-17 T 12-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 ABD1_22280 a4e4e8b0b5f9beada5641232c826f7d7 199 Gene3D G3DSA:3.40.50.150 24 187 1.0E-41 T 12-10-2018 ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 227 6.5E-63 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 SUPERFAMILY SSF47781 17 91 5.93E-11 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 Gene3D G3DSA:3.40.140.10 103 227 2.4E-37 T 12-10-2018 ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 SUPERFAMILY SSF102712 155 197 8.11E-5 T 12-10-2018 ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 Gene3D G3DSA:1.10.150.20 46 88 1.2E-6 T 12-10-2018 ABD1_28600 27ae2f826c0de8377c7ad928bdac5380 235 Pfam PF04002 RadC-like JAB domain 107 225 1.1E-36 T 12-10-2018 IPR025657 RadC-like JAB domain ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 Gene3D G3DSA:3.30.9.90 83 470 8.9E-191 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 SUPERFAMILY SSF54862 470 570 1.24E-29 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 Gene3D G3DSA:3.50.50.60 10 407 8.9E-191 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.4E-6 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 1.4E-6 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 1.7E-50 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 Pfam PF01946 Thi4 family 8 59 1.8E-6 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 Gene3D G3DSA:3.30.70.20 471 565 3.9E-37 T 12-10-2018 ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 SUPERFAMILY SSF51905 6 437 2.11E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_03490 f5df6e9e195888cf052f578e9d305208 570 SUPERFAMILY SSF54373 215 311 1.41E-33 T 12-10-2018 ABD1_21870 07c0627e735a276d0892b25fed86983c 288 Pfam PF03180 NLPA lipoprotein 41 276 1.3E-68 T 12-10-2018 IPR004872 Lipoprotein NlpA family ABD1_21870 07c0627e735a276d0892b25fed86983c 288 SUPERFAMILY SSF53850 37 277 8.4E-67 T 12-10-2018 ABD1_21870 07c0627e735a276d0892b25fed86983c 288 PIRSF PIRSF002854 1 279 3.1E-74 T 12-10-2018 IPR004872 Lipoprotein NlpA family ABD1_21870 07c0627e735a276d0892b25fed86983c 288 Gene3D G3DSA:3.40.190.10 117 228 4.4E-79 T 12-10-2018 ABD1_21870 07c0627e735a276d0892b25fed86983c 288 Gene3D G3DSA:3.40.190.10 40 269 4.4E-79 T 12-10-2018 ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.2E-18 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 Gene3D G3DSA:3.30.70.920 56 140 2.3E-19 T 12-10-2018 ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 SUPERFAMILY SSF54909 68 144 2.32E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 8.8E-10 T 12-10-2018 ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 SMART SM00344 3 112 9.3E-22 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 SUPERFAMILY SSF46785 2 104 2.83E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14950 d171cb535b154114b76bfdbc1ca502f0 156 Gene3D G3DSA:1.10.10.10 1 55 2.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_08930 7cae9982f851b22449c27a375a7845ef 139 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 5 139 3.8E-36 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 ABD1_08930 7cae9982f851b22449c27a375a7845ef 139 Pfam PF13994 PgaD-like protein 6 136 2.8E-27 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 SUPERFAMILY SSF56784 13 206 1.74E-20 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 Gene3D G3DSA:3.40.50.1000 14 208 2.3E-37 T 12-10-2018 IPR023214 HAD superfamily ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 193 4.3E-28 T 12-10-2018 ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 Gene3D G3DSA:1.20.1440.100 26 97 2.3E-37 T 12-10-2018 ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 14 205 3.2E-32 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like ABD1_24840 c8e40a68624deb6abf58a06085f2f912 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 14 196 4.5E-23 T 12-10-2018 ABD1_06520 9e95fbe8a3300f7c4da0e7c3dd4956b0 90 Gene3D G3DSA:3.30.310.50 1 90 6.1E-22 T 12-10-2018 ABD1_06520 9e95fbe8a3300f7c4da0e7c3dd4956b0 90 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 88 2.1E-17 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 ABD1_26990 846424930bdfd9bdfe0e1e02cdafa39b 533 SUPERFAMILY SSF53649 223 517 1.92E-25 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABD1_26990 846424930bdfd9bdfe0e1e02cdafa39b 533 Pfam PF00884 Sulfatase 223 514 8.1E-56 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABD1_26990 846424930bdfd9bdfe0e1e02cdafa39b 533 Pfam PF08019 Domain of unknown function (DUF1705) 45 194 3.6E-40 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 ABD1_26990 846424930bdfd9bdfe0e1e02cdafa39b 533 Gene3D G3DSA:3.40.720.10 201 533 1.2E-92 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_13120 791334ec6f06e90bb799c5f39b040b66 340 Pfam PF09084 NMT1/THI5 like 57 252 3.0E-13 T 12-10-2018 IPR015168 SsuA/THI5-like ABD1_13120 791334ec6f06e90bb799c5f39b040b66 340 SUPERFAMILY SSF53850 39 254 3.73E-32 T 12-10-2018 ABD1_13120 791334ec6f06e90bb799c5f39b040b66 340 Gene3D G3DSA:3.40.190.10 147 339 4.2E-18 T 12-10-2018 ABD1_13120 791334ec6f06e90bb799c5f39b040b66 340 Gene3D G3DSA:3.40.190.10 28 138 1.8E-10 T 12-10-2018 ABD1_16380 819a6b27485e441f9a176a4acb7752ed 205 Gene3D G3DSA:3.50.30.100 2 189 6.9E-39 T 12-10-2018 ABD1_16380 819a6b27485e441f9a176a4acb7752ed 205 Pfam PF03737 Aldolase/RraA 29 166 1.6E-26 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABD1_16380 819a6b27485e441f9a176a4acb7752ed 205 SUPERFAMILY SSF89562 16 178 5.1E-33 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABD1_17480 fa4e7f797d0cdfb182d21458d09beb5b 133 SUPERFAMILY SSF46785 16 131 6.34E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17480 fa4e7f797d0cdfb182d21458d09beb5b 133 Gene3D G3DSA:1.10.10.10 6 80 8.9E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_17480 fa4e7f797d0cdfb182d21458d09beb5b 133 Pfam PF01475 Ferric uptake regulator family 11 131 1.1E-15 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABD1_24500 3965239084524f5f47236e73d3700237 212 Pfam PF00849 RNA pseudouridylate synthase 15 163 3.2E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_24500 3965239084524f5f47236e73d3700237 212 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_24500 3965239084524f5f47236e73d3700237 212 SUPERFAMILY SSF55120 7 211 1.01E-61 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_24500 3965239084524f5f47236e73d3700237 212 Gene3D G3DSA:3.30.2350.10 5 211 1.7E-62 T 12-10-2018 ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 SUPERFAMILY SSF74653 367 447 3.66E-16 T 12-10-2018 ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 TIGRFAM TIGR02794 tolA_full: protein TolA 14 262 1.8E-23 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 TIGRFAM TIGR02794 tolA_full: protein TolA 228 446 4.1E-24 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 Gene3D G3DSA:3.30.1150.10 333 448 2.9E-21 T 12-10-2018 ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 380 436 6.6E-10 T 12-10-2018 IPR006260 TonB/TolA, C-terminal ABD1_25450 389041fceb6d287ab66f170e12ed01a1 448 Pfam PF13103 TonB C terminal 369 431 5.2E-12 T 12-10-2018 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 Gene3D G3DSA:3.40.309.10 250 440 5.6E-143 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 SUPERFAMILY SSF53720 3 458 5.11E-124 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 488 1.8E-257 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 Pfam PF00171 Aldehyde dehydrogenase family 12 462 5.7E-122 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.085 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_05440 4e8ead88f69ceeec7a4aaa33cb8c587a 491 Gene3D G3DSA:3.40.605.10 10 452 5.6E-143 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_08850 378a33ac9acdbe04d2e74224649dc2b9 171 Gene3D G3DSA:3.10.129.10 6 162 1.7E-58 T 12-10-2018 ABD1_08850 378a33ac9acdbe04d2e74224649dc2b9 171 SUPERFAMILY SSF54637 9 159 1.08E-45 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_08850 378a33ac9acdbe04d2e74224649dc2b9 171 Pfam PF03061 Thioesterase superfamily 32 103 1.8E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_08850 378a33ac9acdbe04d2e74224649dc2b9 171 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 102 9.9E-11 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABD1_11470 192869adda6b98a2728ac48f1d0e633f 475 Pfam PF17289 Terminase RNaseH-like domain 314 459 2.1E-17 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like ABD1_11470 192869adda6b98a2728ac48f1d0e633f 475 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 325 460 1.6E-26 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit ABD1_00510 409e6eaf10a60faa52726820a391898a 366 Gene3D G3DSA:3.10.560.10 60 251 2.1E-81 T 12-10-2018 ABD1_00510 409e6eaf10a60faa52726820a391898a 366 Gene3D G3DSA:3.10.560.10 48 336 2.1E-81 T 12-10-2018 ABD1_00510 409e6eaf10a60faa52726820a391898a 366 Gene3D G3DSA:3.30.1950.10 82 166 2.1E-81 T 12-10-2018 ABD1_00510 409e6eaf10a60faa52726820a391898a 366 Pfam PF02563 Polysaccharide biosynthesis/export protein 75 162 2.6E-23 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ABD1_09310 632f60fdb306363f12d8f150a284d592 558 ProSitePatterns PS00149 Sulfatases signature 2. 138 148 - T 12-10-2018 IPR024607 Sulfatase, conserved site ABD1_09310 632f60fdb306363f12d8f150a284d592 558 Gene3D G3DSA:3.40.720.10 35 474 7.8E-131 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_09310 632f60fdb306363f12d8f150a284d592 558 Pfam PF00884 Sulfatase 38 444 3.3E-74 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABD1_09310 632f60fdb306363f12d8f150a284d592 558 SUPERFAMILY SSF53649 36 551 2.18E-134 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABD1_09310 632f60fdb306363f12d8f150a284d592 558 Gene3D G3DSA:3.30.1120.10 481 557 1.6E-15 T 12-10-2018 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 Gene3D G3DSA:2.40.110.10 133 233 1.4E-26 T 12-10-2018 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 SUPERFAMILY SSF47203 238 402 1.93E-18 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 SUPERFAMILY SSF56645 30 232 1.83E-40 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 Gene3D G3DSA:1.20.140.10 234 404 6.8E-47 T 12-10-2018 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 384 1.1E-18 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 130 1.6E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 PIRSF PIRSF016578 7 397 5.4E-37 T 12-10-2018 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 Gene3D G3DSA:1.10.540.10 25 132 5.0E-24 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_14870 ee16e694509de26a0ba8d592dab33a23 407 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 18 406 6.8E-181 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB ABD1_14910 d0c25b340031f93b0b99fc28f8d90656 280 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 117 2.6E-14 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_14910 d0c25b340031f93b0b99fc28f8d90656 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 271 2.7E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_14910 d0c25b340031f93b0b99fc28f8d90656 280 SUPERFAMILY SSF161098 52 256 5.49E-32 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14910 d0c25b340031f93b0b99fc28f8d90656 280 Gene3D G3DSA:1.10.3720.10 39 272 1.6E-39 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_25500 079dae0a4bb684555d022dbde8a604ed 258 Gene3D G3DSA:3.40.1280.10 114 258 6.8E-44 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_25500 079dae0a4bb684555d022dbde8a604ed 258 Pfam PF00588 SpoU rRNA Methylase family 117 250 1.6E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABD1_25500 079dae0a4bb684555d022dbde8a604ed 258 Gene3D G3DSA:3.30.1330.30 5 105 1.9E-8 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like ABD1_25500 079dae0a4bb684555d022dbde8a604ed 258 SUPERFAMILY SSF55315 5 105 3.06E-14 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like ABD1_25500 079dae0a4bb684555d022dbde8a604ed 258 SUPERFAMILY SSF75217 116 258 2.35E-35 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_01960 32135dd396a027f1bc1cc4616a789ab9 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.8E-52 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ABD1_01960 32135dd396a027f1bc1cc4616a789ab9 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ABD1_01960 32135dd396a027f1bc1cc4616a789ab9 175 Gene3D G3DSA:3.90.80.10 1 175 1.7E-71 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ABD1_01960 32135dd396a027f1bc1cc4616a789ab9 175 SUPERFAMILY SSF50324 3 174 5.49E-67 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ABD1_01960 32135dd396a027f1bc1cc4616a789ab9 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.615 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ABD1_14920 67fa9e79b003baf0770eabd769c188c9 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 114 1.3E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABD1_14920 67fa9e79b003baf0770eabd769c188c9 225 SUPERFAMILY SSF161098 16 205 2.62E-39 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14920 67fa9e79b003baf0770eabd769c188c9 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 1.4E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_14920 67fa9e79b003baf0770eabd769c188c9 225 Gene3D G3DSA:1.10.3720.10 9 222 4.8E-48 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 SUPERFAMILY SSF47203 268 411 4.0E-10 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 273 410 1.8E-12 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 PIRSF PIRSF016578 176 419 5.9E-16 T 12-10-2018 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 PIRSF PIRSF016578 41 119 6.2E-7 T 12-10-2018 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 Gene3D G3DSA:2.40.110.10 158 256 1.3E-25 T 12-10-2018 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 Gene3D G3DSA:1.20.140.10 257 436 6.8E-52 T 12-10-2018 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 SUPERFAMILY SSF56645 59 258 1.44E-35 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_14380 714bb99ad966b5cc53833b2909f5cee9 442 Gene3D G3DSA:1.10.540.10 43 157 7.0E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_00700 1fd2748ca34a47e4c3b388ead6289c3b 553 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 546 1.2E-226 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABD1_00700 1fd2748ca34a47e4c3b388ead6289c3b 553 Pfam PF02652 L-lactate permease 17 543 2.0E-216 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 Gene3D G3DSA:3.40.50.1240 1 227 2.4E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 SUPERFAMILY SSF53254 1 222 2.62E-33 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 83 1.4E-8 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 116 217 2.9E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 PIRSF PIRSF000709 1 74 5.0E-4 T 12-10-2018 ABD1_18920 a1669c982cfe105e13aa9826ce544eff 232 SMART SM00855 3 176 1.4E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_22580 9b7865707cbcd7c1b8114979d1fc90c7 60 Gene3D G3DSA:3.30.110.40 1 60 6.9E-8 T 12-10-2018 IPR036868 TusA-like domain superfamily ABD1_22580 9b7865707cbcd7c1b8114979d1fc90c7 60 Pfam PF01206 Sulfurtransferase TusA 1 58 2.1E-8 T 12-10-2018 IPR001455 TusA-like domain ABD1_22580 9b7865707cbcd7c1b8114979d1fc90c7 60 SUPERFAMILY SSF64307 1 58 3.27E-9 T 12-10-2018 IPR036868 TusA-like domain superfamily ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 SMART SM00729 414 664 4.6E-9 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 Pfam PF11842 Domain of unknown function (DUF3362) 632 772 4.9E-63 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 Pfam PF08497 Radical SAM N-terminal 30 417 3.8E-141 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 Pfam PF04055 Radical SAM superfamily 418 621 1.4E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 684 49.018 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 SUPERFAMILY SSF102114 416 668 9.94E-11 T 12-10-2018 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 418 438 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 682 6.0E-257 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 ABD1_01810 e355bc89735c5cfbbaf84b35575fbe30 792 Gene3D G3DSA:3.80.30.20 414 679 7.8E-14 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABD1_24460 afad84210ca91f016c9f4b789559db36 356 Gene3D G3DSA:3.40.50.80 139 263 2.6E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_24460 afad84210ca91f016c9f4b789559db36 356 Gene3D G3DSA:3.10.20.30 264 356 2.3E-13 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_24460 afad84210ca91f016c9f4b789559db36 356 PRINTS PR00406 Cytochrome B5 reductase signature 232 240 1.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 PRINTS PR00406 Cytochrome B5 reductase signature 144 163 1.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 PRINTS PR00406 Cytochrome B5 reductase signature 122 136 1.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 SUPERFAMILY SSF52343 130 251 2.1E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_24460 afad84210ca91f016c9f4b789559db36 356 SUPERFAMILY SSF63380 31 134 1.7E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_24460 afad84210ca91f016c9f4b789559db36 356 SUPERFAMILY SSF54292 256 356 2.23E-14 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 Pfam PF00175 Oxidoreductase NAD-binding domain 145 246 8.0E-14 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 Pfam PF00970 Oxidoreductase FAD-binding domain 43 134 9.4E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_24460 afad84210ca91f016c9f4b789559db36 356 Gene3D G3DSA:2.40.30.10 35 135 1.0E-14 T 12-10-2018 ABD1_07310 1ca3c6d8d1a26895c8545d211126c8ab 207 Pfam PF01810 LysE type translocator 18 204 1.3E-34 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_04830 d29dadb957219198cdda2a152d562355 552 Gene3D G3DSA:3.10.129.10 436 551 1.3E-21 T 12-10-2018 ABD1_04830 d29dadb957219198cdda2a152d562355 552 Gene3D G3DSA:3.40.50.12780 6 316 8.2E-20 T 12-10-2018 ABD1_04830 d29dadb957219198cdda2a152d562355 552 Gene3D G3DSA:3.30.300.30 325 435 1.4E-13 T 12-10-2018 ABD1_04830 d29dadb957219198cdda2a152d562355 552 SUPERFAMILY SSF54637 446 545 7.46E-9 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_04830 d29dadb957219198cdda2a152d562355 552 Pfam PF00501 AMP-binding enzyme 120 288 4.6E-11 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_04830 d29dadb957219198cdda2a152d562355 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 120 131 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_04830 d29dadb957219198cdda2a152d562355 552 SUPERFAMILY SSF56801 19 438 4.32E-45 T 12-10-2018 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 470 2.0E-195 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 2.2E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 SUPERFAMILY SSF55931 103 470 2.35E-129 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 SMART SM01230 103 381 1.1E-131 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 Gene3D G3DSA:3.10.20.70 3 105 4.5E-38 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 Pfam PF00120 Glutamine synthetase, catalytic domain 103 468 1.6E-131 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 SUPERFAMILY SSF54368 4 101 2.35E-35 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABD1_23490 79c48f999a823ed405e96c7d981c0e11 471 Gene3D G3DSA:3.30.590.10 106 459 1.7E-137 T 12-10-2018 ABD1_20970 00bc13da62cf509bd0a5006d1270f968 119 SUPERFAMILY SSF55331 2 118 8.83E-27 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily ABD1_20970 00bc13da62cf509bd0a5006d1270f968 119 Gene3D G3DSA:3.30.429.10 1 119 4.5E-36 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily ABD1_20970 00bc13da62cf509bd0a5006d1270f968 119 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 89 3.1E-7 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 ABD1_18220 87463ef44e9fb472e84fff6f3af40ea2 525 SUPERFAMILY SSF53720 21 517 3.53E-100 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_18220 87463ef44e9fb472e84fff6f3af40ea2 525 Gene3D G3DSA:3.40.605.10 43 518 3.0E-202 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_18220 87463ef44e9fb472e84fff6f3af40ea2 525 Gene3D G3DSA:3.40.309.10 266 453 3.0E-202 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_18220 87463ef44e9fb472e84fff6f3af40ea2 525 Pfam PF00171 Aldehyde dehydrogenase family 18 457 4.6E-48 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 3 235 2.4E-69 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 Gene3D G3DSA:1.25.40.10 20 247 3.0E-42 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 SUPERFAMILY SSF81901 5 194 7.32E-24 T 12-10-2018 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 SMART SM00028 26 59 0.94 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 SMART SM00028 60 96 54.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 SMART SM00028 97 130 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 SMART SM00028 133 166 3.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 Pfam PF13432 Tetratricopeptide repeat 138 194 2.1E-6 T 12-10-2018 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 Pfam PF13432 Tetratricopeptide repeat 31 73 0.0069 T 12-10-2018 ABD1_04710 4be104db97ae83da6e47e70cd3d16712 255 Pfam PF13432 Tetratricopeptide repeat 78 123 2.8E-5 T 12-10-2018 ABD1_16330 f2b6befbd915147193a85f0efb0b3336 477 Gene3D G3DSA:3.50.50.60 1 424 3.7E-116 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_16330 f2b6befbd915147193a85f0efb0b3336 477 SUPERFAMILY SSF51905 2 243 6.48E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_16330 f2b6befbd915147193a85f0efb0b3336 477 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 341 7.6E-113 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ABD1_06450 2a6402da9bc2e04f62ea13a36e6612dc 182 SUPERFAMILY SSF55811 3 163 7.04E-36 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_06450 2a6402da9bc2e04f62ea13a36e6612dc 182 Gene3D G3DSA:2.20.70.10 1 35 2.5E-12 T 12-10-2018 ABD1_06450 2a6402da9bc2e04f62ea13a36e6612dc 182 Pfam PF00293 NUDIX domain 43 141 6.1E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_06450 2a6402da9bc2e04f62ea13a36e6612dc 182 Gene3D G3DSA:3.90.79.10 36 180 4.2E-37 T 12-10-2018 ABD1_06450 2a6402da9bc2e04f62ea13a36e6612dc 182 Pfam PF14803 Nudix N-terminal 3 35 6.5E-14 T 12-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 ABD1_21170 2b08b446ec20d87d6b594b521ac615b3 102 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 91 1.5E-17 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ ABD1_21170 2b08b446ec20d87d6b594b521ac615b3 102 Pfam PF04221 RelB antitoxin 5 71 4.6E-13 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ ABD1_21170 2b08b446ec20d87d6b594b521ac615b3 102 Gene3D G3DSA:1.10.1220.10 2 51 2.4E-14 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ABD1_11960 269cc45c0eab6480c46a892717a98070 250 Pfam PF01551 Peptidase family M23 148 242 3.4E-30 T 12-10-2018 IPR016047 Peptidase M23 ABD1_11960 269cc45c0eab6480c46a892717a98070 250 Gene3D G3DSA:2.70.70.10 93 249 8.7E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_11960 269cc45c0eab6480c46a892717a98070 250 Gene3D G3DSA:2.60.40.1590 3 92 9.2E-20 T 12-10-2018 ABD1_11960 269cc45c0eab6480c46a892717a98070 250 SUPERFAMILY SSF51261 73 246 2.88E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_16200 1db71d4175c103e86e448095b91a1603 157 SUPERFAMILY SSF46785 2 132 3.67E-38 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_16200 1db71d4175c103e86e448095b91a1603 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.9E-46 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type ABD1_16200 1db71d4175c103e86e448095b91a1603 157 Pfam PF02082 Transcriptional regulator 1 83 5.4E-31 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type ABD1_16200 1db71d4175c103e86e448095b91a1603 157 Gene3D G3DSA:1.10.10.10 1 144 5.6E-53 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_16200 1db71d4175c103e86e448095b91a1603 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABD1_33380 39548dd46e8eaeb56507f78013af57c4 186 SUPERFAMILY SSF48150 4 184 5.57E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABD1_33380 39548dd46e8eaeb56507f78013af57c4 186 Pfam PF03352 Methyladenine glycosylase 8 183 2.9E-70 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ABD1_33380 39548dd46e8eaeb56507f78013af57c4 186 Gene3D G3DSA:1.10.340.30 3 186 8.1E-75 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 307 3.2E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_18250 e819578d97f792e36041943a3c37b282 362 Gene3D G3DSA:2.40.50.100 65 97 1.3E-15 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 Gene3D G3DSA:1.10.287.470 129 231 1.7E-7 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 SUPERFAMILY SSF111369 185 305 2.62E-18 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 Gene3D G3DSA:1.10.287.470 98 126 1.3E-15 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 362 3.4E-6 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_18250 e819578d97f792e36041943a3c37b282 362 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 3.4E-6 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_18250 e819578d97f792e36041943a3c37b282 362 SUPERFAMILY SSF111369 63 120 3.79E-11 T 12-10-2018 ABD1_18250 e819578d97f792e36041943a3c37b282 362 Gene3D G3DSA:2.40.30.170 247 362 3.7E-32 T 12-10-2018 ABD1_03770 af47ae6c0749ff28be8252099d4de784 225 Pfam PF07077 Protein of unknown function (DUF1345) 40 214 9.9E-60 T 12-10-2018 IPR009781 Protein of unknown function DUF1345 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 SUPERFAMILY SSF90123 15 313 8.24E-28 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 Pfam PF00005 ABC transporter 345 482 7.4E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 Gene3D G3DSA:3.40.50.300 320 534 5.3E-51 T 12-10-2018 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 Pfam PF00664 ABC transporter transmembrane region 18 271 9.1E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 SMART SM00382 353 530 1.1E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 Gene3D G3DSA:1.20.1560.10 13 313 4.2E-21 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_23720 e26659399ccc05b78f5c448c9cd4a7a0 536 SUPERFAMILY SSF52540 326 528 4.97E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11230 98314deec5a85f720f24f4f68bcfc1be 356 Gene3D G3DSA:3.40.50.300 15 98 2.4E-6 T 12-10-2018 ABD1_11230 98314deec5a85f720f24f4f68bcfc1be 356 Pfam PF13479 AAA domain 14 199 2.0E-24 T 12-10-2018 ABD1_11230 98314deec5a85f720f24f4f68bcfc1be 356 SUPERFAMILY SSF52540 18 174 5.42E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_11230 98314deec5a85f720f24f4f68bcfc1be 356 SMART SM00382 13 213 4.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 Gene3D G3DSA:3.30.420.40 95 176 3.2E-56 T 12-10-2018 ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 Gene3D G3DSA:3.30.420.40 3 207 3.2E-56 T 12-10-2018 ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 SUPERFAMILY SSF53067 1 103 2.42E-23 T 12-10-2018 ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 SUPERFAMILY SSF53067 111 205 1.28E-12 T 12-10-2018 ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 Pfam PF00814 Glycoprotease family 33 140 3.0E-24 T 12-10-2018 IPR000905 Gcp-like domain ABD1_06480 4980978207c6998f0286eb85a7de7dcc 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 207 1.6E-50 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 SUPERFAMILY SSF52922 197 333 2.09E-31 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 SUPERFAMILY SSF52518 23 192 3.37E-48 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 Gene3D G3DSA:3.40.50.920 203 333 3.2E-34 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 Pfam PF02779 Transketolase, pyrimidine binding domain 33 190 2.2E-33 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 Gene3D G3DSA:3.40.50.970 6 197 1.1E-49 T 12-10-2018 ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 Pfam PF02780 Transketolase, C-terminal domain 203 325 6.1E-28 T 12-10-2018 IPR033248 Transketolase, C-terminal domain ABD1_09240 5f8123b8f775a5ddfa47c0bf925f86da 334 SMART SM00861 27 191 3.6E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABD1_03550 3c3476408d944e5a79715fbad10abcd8 64 SUPERFAMILY SSF57716 2 59 4.13E-20 T 12-10-2018 ABD1_03550 3c3476408d944e5a79715fbad10abcd8 64 Pfam PF03884 DNA gyrase inhibitor YacG 6 53 4.8E-23 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ABD1_03550 3c3476408d944e5a79715fbad10abcd8 64 Gene3D G3DSA:3.30.50.10 2 62 5.6E-22 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 ABD1_03550 3c3476408d944e5a79715fbad10abcd8 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 18.31 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 SUPERFAMILY SSF52418 75 342 6.02E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 Gene3D G3DSA:3.40.1030.10 71 348 3.5E-102 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 8.2E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 Gene3D G3DSA:1.20.970.10 1 70 5.1E-31 T 12-10-2018 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 SUPERFAMILY SSF47648 1 70 2.75E-19 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 Pfam PF00591 Glycosyl transferase family, a/b domain 75 330 1.5E-100 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 37.702 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABD1_23550 f6bf8dcbd33b30bb9c535b68756d2fe1 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 338 7.7E-118 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABD1_31460 2830cbfa2b89f29e8343322f491888ef 240 Gene3D G3DSA:3.40.630.30 118 231 1.4E-8 T 12-10-2018 ABD1_31460 2830cbfa2b89f29e8343322f491888ef 240 SUPERFAMILY SSF55729 140 226 6.2E-9 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 Gene3D G3DSA:3.40.50.150 95 315 9.5E-75 T 12-10-2018 ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 SUPERFAMILY SSF53335 83 312 4.03E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 89 314 9.5E-83 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 100 115 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 Pfam PF01209 ubiE/COQ5 methyltransferase family 83 314 4.7E-100 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 222 236 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABD1_03240 3271eadef75fa160b5b220c957d6d77b 315 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 80 314 38.641 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABD1_25570 7f14f92be0869315ce6238bcc8feab91 397 Pfam PF01594 AI-2E family transporter 11 343 3.8E-60 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 Gene3D G3DSA:3.40.50.10490 5 195 5.0E-59 T 12-10-2018 ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 3.0E-106 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF01380 SIS domain 41 172 4.7E-27 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 Gene3D G3DSA:3.10.580.10 196 322 5.2E-45 T 12-10-2018 ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 SMART SM00116 210 258 0.036 T 12-10-2018 IPR000644 CBS domain ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 SMART SM00116 276 324 2.9E-5 T 12-10-2018 IPR000644 CBS domain ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 PIRSF PIRSF004692 1 325 1.8E-134 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF00571 CBS domain 201 258 3.3E-6 T 12-10-2018 IPR000644 CBS domain ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF00571 CBS domain 269 322 1.4E-11 T 12-10-2018 IPR000644 CBS domain ABD1_12590 308a02d0652515f94cfb594ebe784c7f 325 SUPERFAMILY SSF53697 14 322 8.23E-66 T 12-10-2018 ABD1_09140 caaf425206f59ceb242fc29979db300d 160 Gene3D G3DSA:3.90.45.10 1 160 1.4E-53 T 12-10-2018 IPR036821 Peptide deformylase superfamily ABD1_09140 caaf425206f59ceb242fc29979db300d 160 SUPERFAMILY SSF56420 4 160 2.09E-52 T 12-10-2018 IPR036821 Peptide deformylase superfamily ABD1_09140 caaf425206f59ceb242fc29979db300d 160 PIRSF PIRSF004749 1 160 1.5E-47 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 Pfam PF01327 Polypeptide deformylase 6 160 2.3E-44 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 Hamap MF_00163 Peptide deformylase [def]. 3 160 24.454 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 160 5.8E-42 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 PRINTS PR01576 Peptide deformylase signature 37 66 1.2E-31 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 PRINTS PR01576 Peptide deformylase signature 113 131 1.2E-31 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 PRINTS PR01576 Peptide deformylase signature 101 112 1.2E-31 T 12-10-2018 IPR023635 Peptide deformylase ABD1_09140 caaf425206f59ceb242fc29979db300d 160 PRINTS PR01576 Peptide deformylase signature 132 160 1.2E-31 T 12-10-2018 IPR023635 Peptide deformylase ABD1_06830 b901ab416ccd9cb29b942471c814c053 347 Gene3D G3DSA:3.20.20.210 1 343 4.1E-135 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_06830 b901ab416ccd9cb29b942471c814c053 347 SUPERFAMILY SSF51726 7 340 4.71E-69 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABD1_06830 b901ab416ccd9cb29b942471c814c053 347 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.1E-36 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABD1_06830 b901ab416ccd9cb29b942471c814c053 347 PIRSF PIRSF005632 1 343 1.3E-198 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit ABD1_01300 9a24e1988f85f4fee4fabbbe01709c57 196 Pfam PF01810 LysE type translocator 13 164 2.5E-6 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_28340 0bdd041c5d4b45f13d9da63d35a507b6 487 Pfam PF13091 PLD-like domain 311 450 1.1E-20 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABD1_28340 0bdd041c5d4b45f13d9da63d35a507b6 487 Gene3D G3DSA:3.30.870.10 300 458 2.9E-26 T 12-10-2018 ABD1_28340 0bdd041c5d4b45f13d9da63d35a507b6 487 SUPERFAMILY SSF56024 292 456 2.62E-19 T 12-10-2018 ABD1_28340 0bdd041c5d4b45f13d9da63d35a507b6 487 SUPERFAMILY SSF56024 76 268 2.15E-18 T 12-10-2018 ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 Gene3D G3DSA:1.20.81.30 254 363 6.0E-26 T 12-10-2018 ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 6.8E-29 T 12-10-2018 IPR018076 Type II secretion system F domain ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 4.4E-29 T 12-10-2018 IPR018076 Type II secretion system F domain ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 4.1E-144 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.9E-30 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.9E-30 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.9E-30 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.9E-30 T 12-10-2018 IPR003004 GspF/PilC family ABD1_03410 fed20e355b7eac75c835d50f4289c76e 401 Gene3D G3DSA:1.20.81.30 55 170 3.1E-27 T 12-10-2018 ABD1_10790 49d9a11fe973ae3ebaa02cea43bd1410 414 Gene3D G3DSA:3.20.20.70 1 350 9.6E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_10790 49d9a11fe973ae3ebaa02cea43bd1410 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 1.2E-60 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_10790 49d9a11fe973ae3ebaa02cea43bd1410 414 SUPERFAMILY SSF51395 1 348 1.0E-105 T 12-10-2018 ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.399 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 Gene3D G3DSA:3.40.1160.10 3 242 2.2E-66 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 PIRSF PIRSF005650 4 242 5.1E-84 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 Pfam PF00696 Amino acid kinase family 11 220 9.7E-24 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 SUPERFAMILY SSF53633 7 240 3.67E-63 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABD1_20010 101864605a7c7521f644e6cefa2e2046 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.6E-93 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABD1_08890 26eb71a3a5c34c6f674230b264db5d64 176 PIRSF PIRSF011484 1 176 4.4E-59 T 12-10-2018 IPR009822 YaeQ ABD1_08890 26eb71a3a5c34c6f674230b264db5d64 176 Pfam PF07152 YaeQ protein 1 170 3.0E-65 T 12-10-2018 IPR009822 YaeQ ABD1_08890 26eb71a3a5c34c6f674230b264db5d64 176 Gene3D G3DSA:3.10.640.10 1 176 3.5E-67 T 12-10-2018 IPR038590 YaeQ superfamily ABD1_08890 26eb71a3a5c34c6f674230b264db5d64 176 SMART SM01322 1 174 2.7E-99 T 12-10-2018 IPR009822 YaeQ ABD1_08890 26eb71a3a5c34c6f674230b264db5d64 176 SUPERFAMILY SSF52980 2 175 3.22E-62 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 41.097 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 Gene3D G3DSA:1.10.287.610 105 152 1.6E-92 T 12-10-2018 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 160 177 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 198 212 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 177 188 6.8E-36 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 1.8E-103 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 Gene3D G3DSA:3.40.50.10490 11 221 1.6E-92 T 12-10-2018 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 Pfam PF00318 Ribosomal protein S2 11 226 2.5E-94 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_23240 740c955f56a660f3201c8628f6df80b9 250 SUPERFAMILY SSF52313 8 234 6.41E-94 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ABD1_25900 3541d00030d782f8b01701015cc73e06 324 SUPERFAMILY SSF55681 10 321 1.56E-68 T 12-10-2018 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 321 1.9E-40 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 Gene3D G3DSA:3.30.930.10 1 324 5.6E-95 T 12-10-2018 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 1.2E-12 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 77 90 1.2E-12 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 1.2E-12 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 95 112 1.2E-12 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABD1_25900 3541d00030d782f8b01701015cc73e06 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 319 8.2E-119 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 Gene3D G3DSA:1.10.10.10 1 88 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 Gene3D G3DSA:3.40.190.290 91 293 2.7E-33 T 12-10-2018 ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 SUPERFAMILY SSF53850 86 293 8.14E-27 T 12-10-2018 ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 Pfam PF03466 LysR substrate binding domain 89 291 5.0E-27 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_08690 0446d70303159e6aff88c19b3d012af5 296 SUPERFAMILY SSF46785 1 83 2.95E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_04590 5e5640dd9252742f80dc84068f3853fb 165 Gene3D G3DSA:3.40.50.300 1 158 4.4E-61 T 12-10-2018 ABD1_04590 5e5640dd9252742f80dc84068f3853fb 165 Pfam PF01202 Shikimate kinase 5 156 1.8E-15 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABD1_04590 5e5640dd9252742f80dc84068f3853fb 165 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 1 154 9.2E-56 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ABD1_04590 5e5640dd9252742f80dc84068f3853fb 165 SUPERFAMILY SSF52540 1 156 2.34E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09680 faf8c4de7ec392a04d8d32217a00918f 102 Gene3D G3DSA:2.10.150.10 1 102 1.9E-46 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09680 faf8c4de7ec392a04d8d32217a00918f 102 Pfam PF00699 Urease beta subunit 3 100 5.5E-44 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09680 faf8c4de7ec392a04d8d32217a00918f 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.452 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09680 faf8c4de7ec392a04d8d32217a00918f 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.0E-45 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_09680 faf8c4de7ec392a04d8d32217a00918f 102 SUPERFAMILY SSF51278 1 102 3.79E-46 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABD1_33450 9979bea20e605613bf042b43b9f05283 225 Gene3D G3DSA:3.30.530.20 26 211 8.1E-48 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_33450 9979bea20e605613bf042b43b9f05283 225 SUPERFAMILY SSF55961 15 203 1.57E-34 T 12-10-2018 ABD1_33450 9979bea20e605613bf042b43b9f05283 225 Pfam PF01852 START domain 33 192 8.9E-9 T 12-10-2018 IPR002913 START domain GO:0008289 ABD1_33450 9979bea20e605613bf042b43b9f05283 225 PIRSF PIRSF039033 2 221 2.4E-42 T 12-10-2018 IPR028347 START domain-containing protein ABD1_33640 c9c9579c629d492805f7473db04338d6 230 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 230 8.1E-66 T 12-10-2018 IPR026387 Outer membrane protein ABD1_17130 4ee8d68f343d1119a5791f10e7feb6a4 284 Gene3D G3DSA:1.10.3720.10 80 276 2.3E-22 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_17130 4ee8d68f343d1119a5791f10e7feb6a4 284 SUPERFAMILY SSF161098 87 263 1.31E-28 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_17130 4ee8d68f343d1119a5791f10e7feb6a4 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 277 1.5E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.9E-7 T 12-10-2018 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.9E-7 T 12-10-2018 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.9E-7 T 12-10-2018 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.9E-7 T 12-10-2018 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 SUPERFAMILY SSF103473 8 460 8.5E-65 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 Pfam PF07690 Major Facilitator Superfamily 22 412 1.9E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 Gene3D G3DSA:1.20.1720.10 16 205 4.8E-47 T 12-10-2018 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 422 1.2E-79 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABD1_01860 fc015cfd54aca395bbf94ceea37b4543 463 Gene3D G3DSA:1.20.1250.20 255 461 7.4E-17 T 12-10-2018 ABD1_15030 f890a7172eda6c0ad5d3632eebaeded4 471 PIRSF PIRSF002744 1 468 2.4E-100 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 ABD1_15030 f890a7172eda6c0ad5d3632eebaeded4 471 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 442 1.8E-50 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABD1_15030 f890a7172eda6c0ad5d3632eebaeded4 471 Gene3D G3DSA:1.10.4160.10 4 466 6.7E-46 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily ABD1_13560 a7acc4b729fb07470342a9700d359cdc 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 43 8.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_13560 a7acc4b729fb07470342a9700d359cdc 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 3.2E-9 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_13560 a7acc4b729fb07470342a9700d359cdc 201 Gene3D G3DSA:2.160.10.10 3 180 7.5E-52 T 12-10-2018 ABD1_13560 a7acc4b729fb07470342a9700d359cdc 201 SUPERFAMILY SSF51161 2 171 1.8E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 7.4E-49 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 Gene3D G3DSA:3.20.130.10 305 487 1.8E-61 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 285 1.1E-68 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 PIRSF PIRSF001394 1 505 1.1E-211 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 SUPERFAMILY SSF117457 316 486 3.4E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 Pfam PF05681 Fumarate hydratase (Fumerase) 13 285 2.8E-102 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABD1_04530 5ac0836fdeacc8f5da3ecd4a02df46fb 508 Pfam PF05683 Fumarase C-terminus 289 487 4.7E-78 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 SUPERFAMILY SSF51735 6 260 2.13E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.3E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 261 4.9E-109 T 12-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 2.0E-64 T 12-10-2018 ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 Gene3D G3DSA:3.40.50.720 1 261 1.6E-81 T 12-10-2018 ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17300 de4fdb8c0b2aec73c36fa2f14554e849 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_05550 8a8887fc231035f75a971153d9c2f971 343 SUPERFAMILY SSF46565 245 337 2.88E-10 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_05550 8a8887fc231035f75a971153d9c2f971 343 Gene3D G3DSA:1.10.287.110 274 339 3.6E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_32460 5f33afb3930846412e161691ddc88a0e 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 7.8E-8 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABD1_32460 5f33afb3930846412e161691ddc88a0e 116 SUPERFAMILY SSF69754 1 95 1.44E-10 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABD1_32460 5f33afb3930846412e161691ddc88a0e 116 Gene3D G3DSA:3.30.160.100 1 103 3.0E-6 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABD1_08190 b5062035104f18a85781a09f0e8a51ba 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 39.671 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ABD1_08190 b5062035104f18a85781a09f0e8a51ba 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 8.6E-16 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ABD1_08190 b5062035104f18a85781a09f0e8a51ba 271 SUPERFAMILY SSF55729 84 243 5.16E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_08190 b5062035104f18a85781a09f0e8a51ba 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 8.2E-39 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ABD1_08190 b5062035104f18a85781a09f0e8a51ba 271 PIRSF PIRSF037208 4 252 2.7E-97 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ABD1_17060 e51e747b46b216e3e72525f31b0bf9d8 75 Pfam PF01638 HxlR-like helix-turn-helix 1 54 2.5E-15 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_17060 e51e747b46b216e3e72525f31b0bf9d8 75 SUPERFAMILY SSF46785 1 64 3.2E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17060 e51e747b46b216e3e72525f31b0bf9d8 75 Gene3D G3DSA:1.10.10.10 1 67 1.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 314 4.5E-91 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 TIGRFAM TIGR00874 talAB: transaldolase 5 318 4.0E-128 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 SUPERFAMILY SSF51569 4 319 3.66E-101 T 12-10-2018 ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 Gene3D G3DSA:3.20.20.70 2 326 2.2E-122 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_20610 0184c8e1e4559e37a7dd2d871dac9caa 329 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABD1_31000 a64609fb66a3f536d7b7ad10fd8420b1 436 Gene3D G3DSA:1.20.1600.10 4 422 7.2E-29 T 12-10-2018 ABD1_31000 a64609fb66a3f536d7b7ad10fd8420b1 436 Pfam PF02321 Outer membrane efflux protein 235 399 3.2E-12 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_31000 a64609fb66a3f536d7b7ad10fd8420b1 436 Pfam PF02321 Outer membrane efflux protein 28 202 4.7E-10 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_31000 a64609fb66a3f536d7b7ad10fd8420b1 436 SUPERFAMILY SSF56954 25 401 2.09E-39 T 12-10-2018 ABD1_31760 78941b020672d7a862b384e639712455 430 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 11 415 2.3E-173 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 ABD1_31760 78941b020672d7a862b384e639712455 430 Pfam PF00202 Aminotransferase class-III 26 413 1.2E-123 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_31760 78941b020672d7a862b384e639712455 430 Gene3D G3DSA:3.40.640.10 60 319 3.1E-148 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_31760 78941b020672d7a862b384e639712455 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_31760 78941b020672d7a862b384e639712455 430 SUPERFAMILY SSF53383 26 415 1.46E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_31760 78941b020672d7a862b384e639712455 430 PIRSF PIRSF000521 3 131 0.0018 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_31760 78941b020672d7a862b384e639712455 430 PIRSF PIRSF000521 127 418 1.2E-45 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_31760 78941b020672d7a862b384e639712455 430 Gene3D G3DSA:3.90.1150.10 9 411 3.1E-148 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_15100 9c8faebfff4b577b0d261ee778752d45 339 Gene3D G3DSA:2.60.40.3310 23 192 6.7E-46 T 12-10-2018 ABD1_15100 9c8faebfff4b577b0d261ee778752d45 339 SUPERFAMILY SSF49401 191 339 7.46E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily ABD1_15100 9c8faebfff4b577b0d261ee778752d45 339 Pfam PF00419 Fimbrial protein 185 338 1.5E-19 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 ABD1_15100 9c8faebfff4b577b0d261ee778752d45 339 Gene3D G3DSA:2.60.40.1090 193 339 2.2E-25 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 2.1E-31 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 SUPERFAMILY SSF53474 11 373 7.96E-100 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 Gene3D G3DSA:3.40.50.1820 24 359 1.2E-139 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 1.4E-139 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 Gene3D G3DSA:1.10.1740.110 186 291 1.2E-139 T 12-10-2018 ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 8 373 29.048 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABD1_04440 3f79bf42c1fe796832ea8597b55cf925 386 PIRSF PIRSF000443 2 381 2.0E-132 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABD1_22100 ce2d3831ea4ec15ae75a90b14ce7c334 339 SMART SM00972 270 336 2.1E-13 T 12-10-2018 IPR007893 Spore coat protein U ABD1_22100 ce2d3831ea4ec15ae75a90b14ce7c334 339 SUPERFAMILY SSF49401 19 151 2.3E-5 T 12-10-2018 IPR008966 Adhesion domain superfamily ABD1_22100 ce2d3831ea4ec15ae75a90b14ce7c334 339 Pfam PF05229 Spore Coat Protein U domain 200 335 2.1E-24 T 12-10-2018 IPR007893 Spore coat protein U ABD1_15440 c9c8927d86dac61f72deedd72fa09b46 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 178 2.1E-53 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Gene3D G3DSA:3.30.413.10 261 361 1.8E-27 T 12-10-2018 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Pfam PF04551 GcpE protein 11 352 8.1E-133 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 PIRSF PIRSF004640 1 362 1.0E-146 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 SUPERFAMILY SSF56014 264 352 1.36E-13 T 12-10-2018 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 4.6E-130 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 SUPERFAMILY SSF51717 15 208 1.73E-10 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 362 34.66 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABD1_04730 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Gene3D G3DSA:3.20.20.20 1 260 1.1E-103 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_06250 8b28b6469eb1f7381393385b5f6beb8b 125 Gene3D G3DSA:1.20.1280.230 19 125 1.2E-60 T 12-10-2018 ABD1_06250 8b28b6469eb1f7381393385b5f6beb8b 125 Pfam PF16309 Domian of unknown function (DUF4951) 43 125 6.4E-48 T 12-10-2018 IPR032538 Protein of unknown function DUF4951 ABD1_17040 5cfb62effffa052d7e2498376a19fe28 305 Pfam PF00892 EamA-like transporter family 3 134 6.2E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_17040 5cfb62effffa052d7e2498376a19fe28 305 Pfam PF00892 EamA-like transporter family 150 285 2.0E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_17040 5cfb62effffa052d7e2498376a19fe28 305 SUPERFAMILY SSF103481 187 285 2.09E-9 T 12-10-2018 ABD1_17040 5cfb62effffa052d7e2498376a19fe28 305 SUPERFAMILY SSF103481 35 137 3.79E-15 T 12-10-2018 ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 Gene3D G3DSA:1.20.120.530 88 226 2.3E-18 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.4E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.4E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 SMART SM00345 14 73 1.2E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.3E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 SUPERFAMILY SSF46785 1 77 3.76E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 SUPERFAMILY SSF48008 89 220 6.02E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 Pfam PF07729 FCD domain 94 214 2.1E-15 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 SMART SM00895 93 216 9.4E-11 T 12-10-2018 IPR011711 GntR, C-terminal ABD1_22180 80ea2acb806f7db81753cde931a65f9e 232 Gene3D G3DSA:1.10.10.10 3 80 1.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 PIRSF PIRSF004553 4 181 1.4E-46 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 SUPERFAMILY SSF53335 4 179 4.04E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 Pfam PF03602 Conserved hypothetical protein 95 5 179 5.9E-54 T 12-10-2018 ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 180 2.0E-50 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABD1_09740 d4d07def9ca7882049285d372dcb1a50 183 Gene3D G3DSA:3.40.50.150 1 183 1.2E-54 T 12-10-2018 ABD1_33830 74d0cbfc8c0c9a7326976f550d2220b7 198 Pfam PF01569 PAP2 superfamily 62 170 9.6E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_33830 74d0cbfc8c0c9a7326976f550d2220b7 198 SUPERFAMILY SSF48317 5 172 1.57E-26 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABD1_33830 74d0cbfc8c0c9a7326976f550d2220b7 198 SMART SM00014 58 166 7.3E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_33830 74d0cbfc8c0c9a7326976f550d2220b7 198 Gene3D G3DSA:1.20.144.10 91 181 9.3E-15 T 12-10-2018 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 PIRSF PIRSF015626 4 263 3.3E-76 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 25 262 4.4E-68 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 Gene3D G3DSA:3.40.140.10 122 263 2.4E-45 T 12-10-2018 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 Gene3D G3DSA:3.10.20.10 31 116 6.9E-6 T 12-10-2018 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 Pfam PF02634 FdhD/NarQ family 29 262 1.4E-67 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 5 263 29.211 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABD1_25930 25f440b9d244edae6ed65c5072707f11 263 SUPERFAMILY SSF53927 10 262 7.82E-76 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABD1_15390 51b34734c3a60a1a5aac64b085a7ae53 232 Pfam PF02146 Sir2 family 9 182 1.1E-47 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 ABD1_15390 51b34734c3a60a1a5aac64b085a7ae53 232 SUPERFAMILY SSF52467 3 230 3.93E-66 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABD1_15390 51b34734c3a60a1a5aac64b085a7ae53 232 Gene3D G3DSA:3.30.1600.10 18 154 1.5E-64 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily ABD1_15390 51b34734c3a60a1a5aac64b085a7ae53 232 Gene3D G3DSA:3.40.50.1220 5 202 1.5E-64 T 12-10-2018 ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 SMART SM00471 59 261 1.5E-7 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3210.10 28 244 2.5E-139 T 12-10-2018 ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3550.10 114 429 2.5E-139 T 12-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 Pfam PF01966 HD domain 63 144 9.0E-9 T 12-10-2018 IPR006674 HD domain ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3410.10 245 356 2.5E-139 T 12-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 SUPERFAMILY SSF109604 25 385 1.65E-63 T 12-10-2018 ABD1_25380 9f73db3f877c8dc60598567e82d6872f 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 6.0E-96 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 ABD1_09370 c052ce1a1c954bc0271c02354d3b1ffc 204 SUPERFAMILY SSF53056 3 203 1.96E-52 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABD1_09370 c052ce1a1c954bc0271c02354d3b1ffc 204 Gene3D G3DSA:3.40.1050.10 1 204 3.7E-61 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABD1_09370 c052ce1a1c954bc0271c02354d3b1ffc 204 Pfam PF00484 Carbonic anhydrase 45 199 2.5E-37 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABD1_09370 c052ce1a1c954bc0271c02354d3b1ffc 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABD1_09370 c052ce1a1c954bc0271c02354d3b1ffc 204 SMART SM00947 38 203 1.9E-51 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 2.4E-27 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 SMART SM00898 2 113 4.6E-46 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 250 4.8E-80 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 1.2E-26 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 Gene3D G3DSA:1.10.8.50 127 251 2.4E-38 T 12-10-2018 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 SUPERFAMILY SSF57716 215 250 2.11E-6 T 12-10-2018 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 Gene3D G3DSA:3.20.190.10 2 125 3.3E-35 T 12-10-2018 IPR035937 MutM-like, N-terminal ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 SUPERFAMILY SSF46946 128 220 6.28E-29 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 SUPERFAMILY SSF81624 2 136 7.06E-37 T 12-10-2018 IPR035937 MutM-like, N-terminal ABD1_27760 86aedfc0d66ae9d6ad4b7e420c0d24cf 251 SMART SM01232 127 219 1.5E-43 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Gene3D G3DSA:3.30.230.80 244 415 9.8E-67 T 12-10-2018 ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PIRSF PIRSF002583 1 639 2.0E-213 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Gene3D G3DSA:1.20.120.790 509 639 1.1E-41 T 12-10-2018 IPR037196 HSP90, C-terminal domain ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 SUPERFAMILY SSF55874 6 217 2.39E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Gene3D G3DSA:3.40.50.11260 416 503 8.9E-32 T 12-10-2018 ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 SMART SM00387 29 186 9.8E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Pfam PF00183 Hsp90 protein 219 637 2.5E-127 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 7 27 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 174 191 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 192 210 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 95 112 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 77 94 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 122 144 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 PRINTS PR00775 90kDa heat shock protein signature 28 50 9.5E-63 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 SUPERFAMILY SSF54211 245 502 1.14E-94 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Gene3D G3DSA:3.30.565.10 1 229 7.5E-78 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 SUPERFAMILY SSF110942 528 638 1.44E-33 T 12-10-2018 IPR037196 HSP90, C-terminal domain ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 184 2.4E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_02730 4941704e06c55bd271208b00e0fa13e7 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 638 31.341 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABD1_20320 5284d183a67ecde701e212739b6707e0 196 PIRSF PIRSF036382 1 190 1.0E-48 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator ABD1_20320 5284d183a67ecde701e212739b6707e0 196 Pfam PF00072 Response regulator receiver domain 6 112 6.0E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_20320 5284d183a67ecde701e212739b6707e0 196 SMART SM01012 128 183 6.8E-20 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 ABD1_20320 5284d183a67ecde701e212739b6707e0 196 SUPERFAMILY SSF52172 1 183 3.56E-42 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_20320 5284d183a67ecde701e212739b6707e0 196 Gene3D G3DSA:1.10.10.10 131 191 1.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20320 5284d183a67ecde701e212739b6707e0 196 Pfam PF03861 ANTAR domain 131 183 2.9E-16 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 ABD1_20320 5284d183a67ecde701e212739b6707e0 196 SMART SM00448 4 112 0.0038 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_20320 5284d183a67ecde701e212739b6707e0 196 Gene3D G3DSA:3.40.50.2300 1 129 2.2E-13 T 12-10-2018 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 Pfam PF17092 Penicillin-binding protein OB-like domain 295 389 2.4E-20 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 SUPERFAMILY SSF56601 187 730 6.01E-123 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 Gene3D G3DSA:1.10.3810.10 25 219 1.6E-74 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 SUPERFAMILY SSF53955 24 232 5.34E-75 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 Pfam PF00905 Penicillin binding protein transpeptidase domain 394 566 4.8E-26 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 Gene3D G3DSA:2.40.50.140 292 386 2.1E-30 T 12-10-2018 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 44 720 9.3E-181 T 12-10-2018 ABD1_30810 8711738a5b40d2c34ae9ce233ad6eae7 821 Pfam PF00912 Transglycosylase 32 205 6.0E-61 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PIRSF PIRSF002869 1 512 1.6E-155 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 157 178 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 52 68 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 133 157 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 416 433 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 357 376 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 33 52 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 259 285 1.1E-69 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 503 9.9E-132 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 Pfam PF03023 MviN-like protein 30 472 5.0E-130 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_00460 dfa08bb9a833ef2b550731a59ea014c5 513 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.676 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABD1_20700 46c40e3293b5510449cac933635dc668 147 Pfam PF00582 Universal stress protein family 3 146 1.4E-28 T 12-10-2018 IPR006016 UspA ABD1_20700 46c40e3293b5510449cac933635dc668 147 SUPERFAMILY SSF52402 1 146 1.76E-35 T 12-10-2018 ABD1_20700 46c40e3293b5510449cac933635dc668 147 PIRSF PIRSF006276 1 147 1.7E-21 T 12-10-2018 IPR006015 Universal stress protein A ABD1_20700 46c40e3293b5510449cac933635dc668 147 Gene3D G3DSA:3.40.50.620 1 147 1.8E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_20700 46c40e3293b5510449cac933635dc668 147 PRINTS PR01438 Universal stress protein signature 106 118 1.6E-18 T 12-10-2018 IPR006015 Universal stress protein A ABD1_20700 46c40e3293b5510449cac933635dc668 147 PRINTS PR01438 Universal stress protein signature 3 21 1.6E-18 T 12-10-2018 IPR006015 Universal stress protein A ABD1_20700 46c40e3293b5510449cac933635dc668 147 PRINTS PR01438 Universal stress protein signature 124 146 1.6E-18 T 12-10-2018 IPR006015 Universal stress protein A ABD1_26710 70c3e7a33a867de22a4bb937132eb500 126 SUPERFAMILY SSF46785 8 124 4.05E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_26710 70c3e7a33a867de22a4bb937132eb500 126 Pfam PF01638 HxlR-like helix-turn-helix 23 110 2.6E-23 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_26710 70c3e7a33a867de22a4bb937132eb500 126 Gene3D G3DSA:1.10.10.10 1 121 9.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_05040 c7a9420a2438e25734664309259bc869 288 PIRSF PIRSF000094 24 284 1.5E-113 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABD1_05040 c7a9420a2438e25734664309259bc869 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 276 8.6E-88 T 12-10-2018 ABD1_05040 c7a9420a2438e25734664309259bc869 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 239 259 3.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05040 c7a9420a2438e25734664309259bc869 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 3.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05040 c7a9420a2438e25734664309259bc869 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 202 3.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_05040 c7a9420a2438e25734664309259bc869 288 Gene3D G3DSA:3.40.50.720 18 288 1.9E-66 T 12-10-2018 ABD1_05040 c7a9420a2438e25734664309259bc869 288 SUPERFAMILY SSF51735 29 279 1.93E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00890 8a7fd10696c261879276b79e0d942bea 399 Pfam PF07690 Major Facilitator Superfamily 30 337 7.6E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_00890 8a7fd10696c261879276b79e0d942bea 399 Gene3D G3DSA:1.20.1250.20 23 395 1.9E-48 T 12-10-2018 ABD1_00890 8a7fd10696c261879276b79e0d942bea 399 SUPERFAMILY SSF103473 11 392 1.22E-56 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 Pfam PF06426 Serine acetyltransferase, N-terminal 83 159 6.3E-5 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 Gene3D G3DSA:1.10.3130.10 33 189 5.9E-51 T 12-10-2018 ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 Gene3D G3DSA:2.160.10.10 190 304 2.3E-29 T 12-10-2018 ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 PIRSF PIRSF000441 123 305 2.1E-51 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 SUPERFAMILY SSF51161 112 290 1.08E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 229 8.3E-4 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_14090 ffe1441ae9b52ebb993dcf64972d78bd 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 249 283 1.2E-6 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_13070 30825683555ebc58da4c59a0dbe247e3 117 Pfam PF01638 HxlR-like helix-turn-helix 27 116 9.1E-29 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_13070 30825683555ebc58da4c59a0dbe247e3 117 Gene3D G3DSA:1.10.10.10 3 117 1.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13070 30825683555ebc58da4c59a0dbe247e3 117 SUPERFAMILY SSF46785 12 114 9.1E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 416 1.3E-18 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Gene3D G3DSA:3.40.1390.10 1 77 6.4E-9 T 12-10-2018 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Gene3D G3DSA:3.90.190.20 340 496 1.1E-55 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 SUPERFAMILY SSF53623 101 330 5.49E-71 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 485 1.6E-142 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 SUPERFAMILY SSF53244 334 485 1.02E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Gene3D G3DSA:3.40.1190.10 100 337 1.6E-73 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 485 30.885 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 Pfam PF08245 Mur ligase middle domain 108 313 6.8E-52 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_30860 a3703f9320fc6dd9af33ab67690159a7 499 SUPERFAMILY SSF63418 15 94 5.1E-10 T 12-10-2018 IPR035911 MurE/MurF, N-terminal ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:2.160.10.10 1233 1337 4.0E-11 T 12-10-2018 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 SUPERFAMILY SSF47336 524 597 3.8E-7 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:2.160.10.10 727 859 3.8E-13 T 12-10-2018 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 SUPERFAMILY SSF51161 729 848 5.54E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 SUPERFAMILY SSF51161 982 1095 1.52E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:2.160.10.10 980 1107 8.6E-10 T 12-10-2018 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 502 8.2E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Pfam PF00501 AMP-binding enzyme 30 418 2.4E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:3.40.50.12780 19 411 6.4E-111 T 12-10-2018 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Pfam PF00550 Phosphopantetheine attachment site 543 596 1.4E-4 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:3.30.300.30 412 515 5.2E-29 T 12-10-2018 ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 Gene3D G3DSA:1.10.1200.10 516 601 2.2E-10 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 SUPERFAMILY SSF51161 1220 1334 2.36E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 627 1332 1.4E-216 T 12-10-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 51 442 1.3E-115 T 12-10-2018 IPR010071 Amino acid adenylation domain ABD1_26040 cc78328cbdd629c05ab52dc2c698b058 1338 SUPERFAMILY SSF56801 24 539 2.22E-141 T 12-10-2018 ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 65 6.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 SUPERFAMILY SSF46689 13 70 3.49E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 SUPERFAMILY SSF48498 82 184 1.05E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 Gene3D G3DSA:1.10.357.10 61 186 2.6E-9 T 12-10-2018 ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 Gene3D G3DSA:1.10.10.60 11 58 1.5E-11 T 12-10-2018 ABD1_21930 e826cb0cff033e6fdb32c70f4b35799a 188 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 180 9.1E-9 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ABD1_29940 4771b373c3b5134c22476e150a8e9787 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 2.2E-76 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_29940 4771b373c3b5134c22476e150a8e9787 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.847 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_29940 4771b373c3b5134c22476e150a8e9787 200 Gene3D G3DSA:3.40.50.10990 2 175 4.8E-71 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_29940 4771b373c3b5134c22476e150a8e9787 200 SUPERFAMILY SSF142695 3 174 7.98E-62 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_29940 4771b373c3b5134c22476e150a8e9787 200 Pfam PF00925 GTP cyclohydrolase II 8 171 6.9E-66 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABD1_05700 d84ccba64837e22529db3dd6e0901edd 394 Gene3D G3DSA:1.20.1250.20 7 384 1.0E-34 T 12-10-2018 ABD1_05700 d84ccba64837e22529db3dd6e0901edd 394 Pfam PF07690 Major Facilitator Superfamily 21 351 2.2E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_05700 d84ccba64837e22529db3dd6e0901edd 394 SUPERFAMILY SSF103473 8 384 2.35E-43 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 Gene3D G3DSA:3.30.70.60 1 92 2.0E-29 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 SUPERFAMILY SSF54995 1 101 5.76E-36 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.701 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 5.1E-33 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21700 f487ba1d616d0807554478ae39c7638c 127 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-24 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_00610 67255e7141c8911048162895f1bc9e82 350 Gene3D G3DSA:3.40.50.2000 152 323 8.6E-17 T 12-10-2018 ABD1_00610 67255e7141c8911048162895f1bc9e82 350 Pfam PF00534 Glycosyl transferases group 1 168 315 2.6E-13 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 ABD1_00610 67255e7141c8911048162895f1bc9e82 350 SUPERFAMILY SSF53756 24 348 5.13E-29 T 12-10-2018 ABD1_00610 67255e7141c8911048162895f1bc9e82 350 Gene3D G3DSA:3.40.50.2000 3 151 2.2E-9 T 12-10-2018 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 522 2.6E-190 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 PIRSF PIRSF000171 4 290 2.4E-18 T 12-10-2018 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 PIRSF PIRSF000171 339 537 9.1E-16 T 12-10-2018 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 Gene3D G3DSA:1.20.58.100 427 542 7.4E-44 T 12-10-2018 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 Pfam PF00890 FAD binding domain 15 394 4.0E-91 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 Pfam PF02910 Fumarate reductase flavoprotein C-term 443 525 9.1E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 SUPERFAMILY SSF51905 5 449 3.42E-67 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 SUPERFAMILY SSF56425 240 355 6.58E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 Gene3D G3DSA:3.50.50.60 15 406 2.0E-148 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 Gene3D G3DSA:3.90.700.10 250 360 2.0E-148 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 SUPERFAMILY SSF46977 428 527 7.06E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 9.1E-8 T 12-10-2018 ABD1_25130 d679b44fba5a2ddfc35b435fba49c681 549 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 9.1E-8 T 12-10-2018 ABD1_23090 bd6d2e42cf43cc7e5a1ea2fcfc256410 257 Pfam PF03583 Secretory lipase 126 227 6.0E-10 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 ABD1_23090 bd6d2e42cf43cc7e5a1ea2fcfc256410 257 SUPERFAMILY SSF53474 82 224 1.62E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23090 bd6d2e42cf43cc7e5a1ea2fcfc256410 257 Gene3D G3DSA:3.40.50.1820 36 250 3.5E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_24590 532158684c6a06279e0509d3e22776de 271 PIRSF PIRSF016184 1 270 4.2E-49 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_24590 532158684c6a06279e0509d3e22776de 271 Gene3D G3DSA:3.10.310.10 117 259 2.4E-82 T 12-10-2018 ABD1_24590 532158684c6a06279e0509d3e22776de 271 SUPERFAMILY SSF54506 2 269 5.34E-71 T 12-10-2018 ABD1_24590 532158684c6a06279e0509d3e22776de 271 Gene3D G3DSA:3.10.310.10 3 262 2.4E-82 T 12-10-2018 ABD1_24590 532158684c6a06279e0509d3e22776de 271 Pfam PF02567 Phenazine biosynthesis-like protein 6 265 2.6E-55 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_24590 532158684c6a06279e0509d3e22776de 271 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 228 5.7E-38 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_30440 383e50917d805d5d82ff4f95ec3e6270 343 Pfam PF03280 Proteobacterial lipase chaperone protein 132 322 1.5E-49 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 ABD1_30440 383e50917d805d5d82ff4f95ec3e6270 343 Hamap MF_00790 Lipase chaperone [lifO]. 5 331 19.646 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 ABD1_30440 383e50917d805d5d82ff4f95ec3e6270 343 SUPERFAMILY SSF158855 60 334 1.96E-86 T 12-10-2018 ABD1_26860 72a2bce94b45fb58f41cea5511bf7256 144 Gene3D G3DSA:3.30.110.70 47 144 1.8E-26 T 12-10-2018 ABD1_26860 72a2bce94b45fb58f41cea5511bf7256 144 SUPERFAMILY SSF117782 57 143 3.53E-26 T 12-10-2018 IPR035439 UPF0145 domain superfamily ABD1_26860 72a2bce94b45fb58f41cea5511bf7256 144 Pfam PF01906 Putative heavy-metal-binding 58 143 1.1E-25 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 Pfam PF00290 Tryptophan synthase alpha chain 8 260 2.0E-87 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 Gene3D G3DSA:3.20.20.70 1 267 6.3E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.147 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 SUPERFAMILY SSF51366 1 245 4.52E-90 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_28130 c4ad0511fb825461bd84cee62c983a7d 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 1.5E-76 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 410 2.6E-124 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 PIRSF PIRSF500136 1 424 1.5E-154 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 SUPERFAMILY SSF51735 7 191 2.69E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 179 1.1E-33 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 Gene3D G3DSA:3.40.50.720 200 422 2.5E-58 T 12-10-2018 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 SMART SM00984 317 417 2.2E-37 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 SUPERFAMILY SSF48179 201 292 7.31E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 5.8E-24 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 PIRSF PIRSF000124 6 422 3.7E-57 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 SUPERFAMILY SSF52413 300 416 2.09E-30 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 Gene3D G3DSA:3.40.50.720 2 197 5.0E-59 T 12-10-2018 ABD1_00520 d0de9d93f7500ab9eb21adb87f390e63 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 2.4E-23 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_31480 1e5a9dd4d2d0a65fb93ddb401e7794f2 333 Pfam PF00248 Aldo/keto reductase family 16 313 1.1E-76 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABD1_31480 1e5a9dd4d2d0a65fb93ddb401e7794f2 333 Gene3D G3DSA:3.20.20.100 1 332 9.0E-118 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_31480 1e5a9dd4d2d0a65fb93ddb401e7794f2 333 SUPERFAMILY SSF51430 1 317 1.28E-101 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_07630 e20ec485d8c0af179a6a839bd41d44d1 385 Gene3D G3DSA:3.90.1150.10 40 382 6.0E-113 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_07630 e20ec485d8c0af179a6a839bd41d44d1 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABD1_07630 e20ec485d8c0af179a6a839bd41d44d1 385 Pfam PF00155 Aminotransferase class I and II 39 383 3.7E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_07630 e20ec485d8c0af179a6a839bd41d44d1 385 Gene3D G3DSA:3.40.640.10 56 292 6.0E-113 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_07630 e20ec485d8c0af179a6a839bd41d44d1 385 SUPERFAMILY SSF53383 4 385 5.96E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 Pfam PF00171 Aldehyde dehydrogenase family 34 521 2.0E-67 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 Gene3D G3DSA:3.10.129.10 545 699 1.4E-43 T 12-10-2018 ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 SUPERFAMILY SSF53720 26 524 1.15E-81 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 SUPERFAMILY SSF54637 549 699 6.44E-39 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 Gene3D G3DSA:3.40.605.10 32 507 3.5E-148 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 Pfam PF01575 MaoC like domain 560 660 1.4E-28 T 12-10-2018 IPR002539 MaoC-like dehydratase domain ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 Gene3D G3DSA:3.40.309.10 280 495 3.5E-148 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_13440 41ea44418b80ad01549d75a7c565d01d 700 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 26 698 2.0E-299 T 12-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 ABD1_06490 b44eac84727294ab916ba2c47dff2402 263 Gene3D G3DSA:3.40.50.150 67 263 9.3E-62 T 12-10-2018 ABD1_06490 b44eac84727294ab916ba2c47dff2402 263 Pfam PF04445 Putative SAM-dependent methyltransferase 74 262 2.7E-50 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 ABD1_06490 b44eac84727294ab916ba2c47dff2402 263 SUPERFAMILY SSF53335 45 262 3.84E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_06490 b44eac84727294ab916ba2c47dff2402 263 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 263 26.069 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 ABD1_27320 70eca913db1ee13074aca751c5f1e2c8 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 3.0E-51 T 12-10-2018 IPR006286 Deglycase PfpI ABD1_27320 70eca913db1ee13074aca751c5f1e2c8 192 Gene3D G3DSA:3.40.50.880 1 192 3.7E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_27320 70eca913db1ee13074aca751c5f1e2c8 192 Pfam PF01965 DJ-1/PfpI family 3 184 7.2E-48 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABD1_27320 70eca913db1ee13074aca751c5f1e2c8 192 SUPERFAMILY SSF52317 1 186 2.07E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 158 376 3.6E-81 T 12-10-2018 ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 173 343 8.4E-33 T 12-10-2018 ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 Gene3D G3DSA:3.40.50.1000 85 377 2.6E-85 T 12-10-2018 IPR023214 HAD superfamily ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 Pfam PF12710 haloacid dehalogenase-like hydrolase 174 341 1.8E-23 T 12-10-2018 ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 Pfam PF13740 ACT domain 1 58 1.6E-12 T 12-10-2018 ABD1_32880 8755054dccc3547b91c46a0a548ffaea 386 SUPERFAMILY SSF56784 169 376 3.6E-53 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_30880 e98ca2806a2225534caea035e950768d 110 Hamap MF_00910 Cell division protein FtsL [ftsL]. 17 100 13.629 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ABD1_30880 e98ca2806a2225534caea035e950768d 110 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 19 100 6.6E-12 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ABD1_30880 e98ca2806a2225534caea035e950768d 110 Pfam PF04999 Cell division protein FtsL 16 101 2.3E-26 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 Gene3D G3DSA:3.30.1300.30 28 285 4.3E-70 T 12-10-2018 ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 SUPERFAMILY SSF158544 87 191 1.39E-28 T 12-10-2018 IPR038072 GspK, central domain superfamily ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 Gene3D G3DSA:1.10.40.60 85 192 4.3E-70 T 12-10-2018 IPR038072 GspK, central domain superfamily ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 Gene3D G3DSA:1.10.40.60 193 260 4.3E-70 T 12-10-2018 IPR038072 GspK, central domain superfamily ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 SUPERFAMILY SSF54523 23 295 2.82E-21 T 12-10-2018 ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 PIRSF PIRSF002786 1 299 8.6E-85 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ABD1_15740 d88e566c5fd3aecc2460461d47ad7f18 301 Pfam PF03934 Type II secretion system (T2SS), protein K 16 292 6.0E-76 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 Pfam PF00005 ABC transporter 31 187 1.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 SUPERFAMILY SSF52540 16 259 3.37E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 Gene3D G3DSA:3.40.50.300 275 529 1.3E-81 T 12-10-2018 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 Gene3D G3DSA:3.40.50.300 13 274 3.9E-75 T 12-10-2018 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 SMART SM00382 40 237 2.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 SMART SM00382 312 510 4.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 SUPERFAMILY SSF52540 277 524 8.44E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_10780 5d404eb27aba8839791df17ec0b306f2 529 Pfam PF00005 ABC transporter 304 453 6.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_02310 687ab26252ae63d11b2e9172f16a350f 249 SUPERFAMILY SSF52374 1 239 1.59E-60 T 12-10-2018 ABD1_02310 687ab26252ae63d11b2e9172f16a350f 249 Gene3D G3DSA:3.40.50.620 1 239 2.2E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_02310 687ab26252ae63d11b2e9172f16a350f 249 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 195 1.2E-33 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABD1_02310 687ab26252ae63d11b2e9172f16a350f 249 Gene3D G3DSA:3.40.50.620 40 176 2.2E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_17820 25f133b1fc21f0a9269939a0d0c826a7 102 Gene3D G3DSA:1.10.260.40 24 98 4.9E-9 T 12-10-2018 ABD1_17820 25f133b1fc21f0a9269939a0d0c826a7 102 SUPERFAMILY SSF47413 26 86 4.02E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_17820 25f133b1fc21f0a9269939a0d0c826a7 102 Pfam PF01381 Helix-turn-helix 36 83 1.0E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_17820 25f133b1fc21f0a9269939a0d0c826a7 102 SMART SM00530 31 87 8.0E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 Pfam PF00171 Aldehyde dehydrogenase family 22 484 1.2E-144 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 Gene3D G3DSA:3.40.309.10 257 457 8.0E-151 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 Gene3D G3DSA:3.40.605.10 32 465 8.0E-151 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 488 3.7E-229 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_01030 2e01cbb46c753b8a8af533cdeb8f8d3f 505 SUPERFAMILY SSF53720 9 490 3.4E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_28720 dd8bf39f76a013237caee9857848ece1 298 Gene3D G3DSA:3.40.50.1820 15 276 8.0E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_28720 dd8bf39f76a013237caee9857848ece1 298 Gene3D G3DSA:1.10.10.800 141 223 8.0E-45 T 12-10-2018 ABD1_28720 dd8bf39f76a013237caee9857848ece1 298 SUPERFAMILY SSF53474 4 296 2.14E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_28720 dd8bf39f76a013237caee9857848ece1 298 Pfam PF12146 Serine aminopeptidase, S33 30 259 1.4E-10 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_12200 f56bfcc80bf51da9d430a2077f5950c7 397 Pfam PF03594 Benzoate membrane transport protein 11 387 4.3E-160 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABD1_12200 f56bfcc80bf51da9d430a2077f5950c7 397 TIGRFAM TIGR00843 benE: benzoate transporter 1 388 1.0E-186 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 PIRSF PIRSF001619 1 318 2.9E-140 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.0E-18 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 SMART SM00729 43 252 3.3E-43 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 Pfam PF04055 Radical SAM superfamily 50 206 9.5E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 SUPERFAMILY SSF102114 5 310 4.71E-92 T 12-10-2018 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 SMART SM00876 220 312 1.4E-42 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 Gene3D G3DSA:3.20.20.70 4 314 5.2E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 Hamap MF_01694 Biotin synthase [bioB]. 5 313 43.159 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABD1_15160 b4356ec735a84b426a13ea700e44e738 329 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.0E-124 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 1.9E-33 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 SUPERFAMILY SSF53681 111 261 4.32E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 Gene3D G3DSA:3.40.50.1860 7 243 3.4E-78 T 12-10-2018 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 Gene3D G3DSA:3.40.50.1860 98 209 3.4E-78 T 12-10-2018 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 SUPERFAMILY SSF53681 7 109 1.99E-30 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 242 1.7E-62 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_33010 a8de71de319900b0c8c9d17fb205e21a 266 Hamap MF_00258 Glutamate racemase [murI]. 6 258 32.669 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 Pfam PF02581 Thiamine monophosphate synthase 160 298 3.1E-18 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.7E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.7E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 SUPERFAMILY SSF55811 3 126 3.52E-29 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 Gene3D G3DSA:3.90.79.10 3 128 1.2E-27 T 12-10-2018 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 Gene3D G3DSA:3.20.20.70 152 299 3.2E-27 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 Pfam PF00293 NUDIX domain 8 125 3.3E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_22840 9ed3a3db7cbfed8d0c5e113f61f3111d 299 SUPERFAMILY SSF51391 152 298 5.62E-23 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABD1_22020 ff156680f91b775c17b3bc4041b42073 205 Pfam PF04403 Paraquat-inducible protein A 45 197 6.3E-39 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like ABD1_03120 ea73120338ba1eb027d06a8d8a790fe6 134 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 96 3.1E-25 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ABD1_03120 ea73120338ba1eb027d06a8d8a790fe6 134 Pfam PF03334 Na+/H+ antiporter subunit 12 91 6.7E-25 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ABD1_24360 f000e5af33017941b3e340655522f584 459 Pfam PF00324 Amino acid permease 17 449 2.0E-111 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_24360 f000e5af33017941b3e340655522f584 459 Gene3D G3DSA:1.20.1740.10 9 457 5.8E-58 T 12-10-2018 ABD1_24360 f000e5af33017941b3e340655522f584 459 PIRSF PIRSF006060 1 458 7.2E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_24360 f000e5af33017941b3e340655522f584 459 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.836 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 Gene3D G3DSA:3.30.1490.10 74 130 1.0E-21 T 12-10-2018 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 Gene3D G3DSA:3.30.1370.30 2 73 1.7E-29 T 12-10-2018 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 SUPERFAMILY SSF56047 2 130 6.54E-47 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 Pfam PF00410 Ribosomal protein S8 5 130 2.3E-49 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29520 fe427d9095b3265668d6ce1bcc2f6be1 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_25240 1c7dc15766db9d67a51e59488d25440d 249 Gene3D G3DSA:2.40.160.170 22 249 2.0E-86 T 12-10-2018 ABD1_25240 1c7dc15766db9d67a51e59488d25440d 249 SUPERFAMILY SSF56925 47 202 4.97E-8 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABD1_18100 8f098c6c148cf7eab5907af0d71ea710 163 SUPERFAMILY SSF55729 1 152 4.38E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_18100 8f098c6c148cf7eab5907af0d71ea710 163 Gene3D G3DSA:3.40.630.30 5 162 1.5E-26 T 12-10-2018 ABD1_18100 8f098c6c148cf7eab5907af0d71ea710 163 Pfam PF00583 Acetyltransferase (GNAT) family 25 143 5.5E-17 T 12-10-2018 IPR000182 GNAT domain ABD1_07270 c4a86f013466b991f0a8ddfb074b9f14 293 PIRSF PIRSF006278 2 290 7.4E-72 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ABD1_07270 c4a86f013466b991f0a8ddfb074b9f14 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 281 1.6E-18 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_07270 c4a86f013466b991f0a8ddfb074b9f14 293 Gene3D G3DSA:3.40.50.1100 37 142 3.3E-60 T 12-10-2018 ABD1_07270 c4a86f013466b991f0a8ddfb074b9f14 293 Gene3D G3DSA:3.40.50.1100 19 284 3.3E-60 T 12-10-2018 ABD1_07270 c4a86f013466b991f0a8ddfb074b9f14 293 SUPERFAMILY SSF53686 16 285 1.73E-52 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_33740 a05483d6ed06d810087338076666235a 266 Gene3D G3DSA:3.40.390.10 94 266 2.6E-19 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ABD1_33740 a05483d6ed06d810087338076666235a 266 PRINTS PR00138 Matrixin signature 247 260 6.7E-11 T 12-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33740 a05483d6ed06d810087338076666235a 266 PRINTS PR00138 Matrixin signature 19 34 6.7E-11 T 12-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33740 a05483d6ed06d810087338076666235a 266 PRINTS PR00138 Matrixin signature 212 237 6.7E-11 T 12-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33740 a05483d6ed06d810087338076666235a 266 Pfam PF00413 Matrixin 59 260 1.0E-13 T 12-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 ABD1_33740 a05483d6ed06d810087338076666235a 266 SMART SM00235 129 261 8.8E-5 T 12-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 ABD1_33740 a05483d6ed06d810087338076666235a 266 SUPERFAMILY SSF55486 192 263 4.26E-17 T 12-10-2018 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 Pfam PF00809 Pterin binding enzyme 26 265 7.1E-81 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 Gene3D G3DSA:3.20.20.20 3 283 1.5E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 2.5E-95 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 SUPERFAMILY SSF51717 11 282 5.23E-98 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_26310 da62a2208cab4fe931f701bdfd382a4d 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABD1_30840 a0deb81864f44c10368c1931b9cce348 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30840 a0deb81864f44c10368c1931b9cce348 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.379 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30840 a0deb81864f44c10368c1931b9cce348 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30840 a0deb81864f44c10368c1931b9cce348 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 372 2.3E-124 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_30840 a0deb81864f44c10368c1931b9cce348 372 Pfam PF00953 Glycosyl transferase family 4 99 296 1.2E-32 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABD1_17420 dd9f3ff25e20504e4baf4ee8fbe2c32c 116 SUPERFAMILY SSF46785 5 105 2.72E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_17420 dd9f3ff25e20504e4baf4ee8fbe2c32c 116 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 1.1E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_17420 dd9f3ff25e20504e4baf4ee8fbe2c32c 116 Gene3D G3DSA:1.10.10.10 1 115 1.9E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_21410 0fec7d9822f7bd2373c32114d4f92b57 145 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 111 4.9E-12 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_21410 0fec7d9822f7bd2373c32114d4f92b57 145 SUPERFAMILY SSF55083 8 128 6.28E-15 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_21410 0fec7d9822f7bd2373c32114d4f92b57 145 Gene3D G3DSA:3.30.70.560 6 127 1.4E-11 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_11210 43db32202b733ead03ac4290fa8fb865 135 Pfam PF04448 Protein of unknown function (DUF551) 69 128 4.5E-5 T 12-10-2018 IPR007539 Domain of unknown function DUF551 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 9.1E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 7 22 4.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 27 36 4.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 42 60 4.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 Gene3D G3DSA:2.40.50.140 1 70 1.8E-27 T 12-10-2018 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 PIRSF PIRSF002599 1 70 4.5E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 SUPERFAMILY SSF50249 2 69 1.16E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_22570 0e17fde790c36bbef0dca78beea04bc7 70 SMART SM00357 6 69 2.9E-28 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 Gene3D G3DSA:3.40.920.10 738 942 2.5E-23 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 SUPERFAMILY SSF52518 455 633 4.3E-12 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 SUPERFAMILY SSF52518 29 206 4.77E-16 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 SUPERFAMILY SSF53323 740 980 6.41E-28 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 SUPERFAMILY SSF52922 277 355 5.23E-6 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 Gene3D G3DSA:3.40.50.970 16 231 8.8E-25 T 12-10-2018 ABD1_13670 a9094f4250270ac449387b7c7f94aed7 1160 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 747 932 4.4E-27 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 SUPERFAMILY SSF103088 144 258 1.05E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 Pfam PF00691 OmpA family 161 242 3.3E-15 T 12-10-2018 IPR006665 OmpA-like domain ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 Pfam PF04355 SmpA / OmlA family 48 112 2.5E-12 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 Gene3D G3DSA:3.30.1450.10 51 124 2.9E-7 T 12-10-2018 IPR037873 BamE-like ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 PRINTS PR01021 OMPA domain signature 183 198 3.7E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 PRINTS PR01021 OMPA domain signature 198 214 3.7E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABD1_09890 41badfc903ee4c6e53b18510eefe3f14 259 Gene3D G3DSA:3.30.1330.60 133 259 1.3E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily ABD1_01770 7ddce814f3daa09695f2b4df0f3de452 188 Pfam PF03358 NADPH-dependent FMN reductase 45 103 2.9E-10 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABD1_01770 7ddce814f3daa09695f2b4df0f3de452 188 SUPERFAMILY SSF52218 1 183 7.99E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_01770 7ddce814f3daa09695f2b4df0f3de452 188 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ABD1_01770 7ddce814f3daa09695f2b4df0f3de452 188 Gene3D G3DSA:3.40.50.360 1 187 1.5E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_11130 606fa1716500012c0c0476f1dc95b55c 332 SUPERFAMILY SSF51556 5 331 1.02E-94 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_11130 606fa1716500012c0c0476f1dc95b55c 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 328 1.9E-127 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 ABD1_11130 606fa1716500012c0c0476f1dc95b55c 332 Hamap MF_01962 Adenine deaminase. 6 318 90.069 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ABD1_11130 606fa1716500012c0c0476f1dc95b55c 332 Gene3D G3DSA:3.20.20.140 1 332 2.1E-110 T 12-10-2018 ABD1_11130 606fa1716500012c0c0476f1dc95b55c 332 Pfam PF00962 Adenosine/AMP deaminase 10 327 2.7E-81 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ABD1_32070 0b65f6fdb98c8a8fb37fe2d6141c6f24 235 SUPERFAMILY SSF75217 73 233 2.88E-34 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases ABD1_32070 0b65f6fdb98c8a8fb37fe2d6141c6f24 235 Pfam PF04452 RNA methyltransferase 21 233 1.8E-44 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_32070 0b65f6fdb98c8a8fb37fe2d6141c6f24 235 PIRSF PIRSF015601 1 235 1.7E-45 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_32070 0b65f6fdb98c8a8fb37fe2d6141c6f24 235 Gene3D G3DSA:3.40.1280.10 3 234 1.7E-30 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABD1_32070 0b65f6fdb98c8a8fb37fe2d6141c6f24 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 9 230 1.3E-31 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 637 2.1E-145 T 12-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 Gene3D G3DSA:3.20.20.80 302 661 6.2E-139 T 12-10-2018 ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 Gene3D G3DSA:3.20.20.370 28 296 2.1E-71 T 12-10-2018 ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 37 657 1.2E-265 T 12-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 Pfam PF01522 Polysaccharide deacetylase 93 257 5.1E-25 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABD1_08910 44f65d62be0fa56215e0ba02a17a50dc 664 SUPERFAMILY SSF88713 53 280 2.61E-36 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABD1_24540 6e5b357bd1c92c73ad09fecaf5a4bd7b 125 Pfam PF06127 Protein of unknown function (DUF962) 20 112 1.3E-30 T 12-10-2018 IPR009305 Protein of unknown function DUF962 ABD1_10830 d51fa612e940b7bea3ba497759f37625 420 Gene3D G3DSA:3.30.70.270 234 410 1.4E-51 T 12-10-2018 ABD1_10830 d51fa612e940b7bea3ba497759f37625 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 1.4E-47 T 12-10-2018 IPR000160 GGDEF domain ABD1_10830 d51fa612e940b7bea3ba497759f37625 420 SMART SM00267 238 412 3.1E-56 T 12-10-2018 IPR000160 GGDEF domain ABD1_10830 d51fa612e940b7bea3ba497759f37625 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 411 3.8E-51 T 12-10-2018 IPR000160 GGDEF domain ABD1_10830 d51fa612e940b7bea3ba497759f37625 420 SUPERFAMILY SSF55073 253 411 8.63E-46 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 Pfam PF00753 Metallo-beta-lactamase superfamily 47 173 2.3E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 Gene3D G3DSA:3.60.15.10 5 243 1.8E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 SUPERFAMILY SSF56281 4 243 1.05E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 41.018 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 5.6E-22 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 PIRSF PIRSF005457 1 243 1.4E-96 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 10 237 2.9E-96 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ABD1_21900 7d89a51dfbcb7bc59583d004b3ec4559 243 SMART SM00849 15 173 2.6E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 Gene3D G3DSA:1.10.10.10 4 85 2.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 Pfam PF03466 LysR substrate binding domain 85 284 9.5E-29 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 SUPERFAMILY SSF46785 3 109 3.43E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 Gene3D G3DSA:3.40.190.290 88 284 1.9E-29 T 12-10-2018 ABD1_01020 a1983c4fe320929453a4f71245f8f243 293 SUPERFAMILY SSF53850 85 287 7.96E-33 T 12-10-2018 ABD1_02620 5322fc0044c9db610969f975b019ed50 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_02620 5322fc0044c9db610969f975b019ed50 168 Gene3D G3DSA:3.30.70.1730 1 126 7.5E-31 T 12-10-2018 ABD1_02620 5322fc0044c9db610969f975b019ed50 168 SUPERFAMILY SSF160369 5 162 2.62E-43 T 12-10-2018 ABD1_02620 5322fc0044c9db610969f975b019ed50 168 Pfam PF00466 Ribosomal protein L10 6 103 5.5E-24 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ABD1_02620 5322fc0044c9db610969f975b019ed50 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 25.693 T 12-10-2018 IPR022973 Ribosomal protein L10 ABD1_01000 d18cb6cea8c6cf4b1ec099422acb83fd 479 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_01000 d18cb6cea8c6cf4b1ec099422acb83fd 479 PIRSF PIRSF006060 3 478 6.0E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_01000 d18cb6cea8c6cf4b1ec099422acb83fd 479 Pfam PF00324 Amino acid permease 24 466 8.1E-107 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_01000 d18cb6cea8c6cf4b1ec099422acb83fd 479 Gene3D G3DSA:1.20.1740.10 14 476 4.7E-64 T 12-10-2018 ABD1_11080 fcd92c2d8fb318a9ef56c1d30b28d2e4 320 PIRSF PIRSF007580 20 303 1.3E-50 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_11080 fcd92c2d8fb318a9ef56c1d30b28d2e4 320 Pfam PF10118 Predicted metal-dependent hydrolase 33 285 1.1E-63 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_09710 ff077dbcedebbd6a50a3e61511794f06 221 PIRSF PIRSF009467 5 221 3.0E-55 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ABD1_09710 ff077dbcedebbd6a50a3e61511794f06 221 Pfam PF01730 UreF 40 179 7.0E-28 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ABD1_09710 ff077dbcedebbd6a50a3e61511794f06 221 Gene3D G3DSA:1.10.4190.10 3 200 8.7E-44 T 12-10-2018 IPR038277 UreF domain superfamily ABD1_09710 ff077dbcedebbd6a50a3e61511794f06 221 Hamap MF_01385 Urease accessory protein UreF [ureF]. 8 221 26.363 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 Gene3D G3DSA:3.40.309.10 266 461 3.7E-159 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 SUPERFAMILY SSF53720 14 495 4.45E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 1.4E-158 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 Gene3D G3DSA:3.40.605.10 23 489 3.7E-159 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_21020 b7c60ce121d00bc25a5fabb34f1e5517 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 SUPERFAMILY SSF53474 55 327 4.73E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 Gene3D G3DSA:3.40.50.1820 36 341 5.9E-100 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 120 4.6E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 272 286 4.6E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 165 178 4.6E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 4.6E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_09360 d0362fc9ca4c5534df56f94c9d9a45f4 341 Pfam PF12697 Alpha/beta hydrolase family 82 319 1.4E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_32820 32126309d6574240f72c02560ddfb997 387 SUPERFAMILY SSF54675 1 123 5.59E-32 T 12-10-2018 ABD1_32820 32126309d6574240f72c02560ddfb997 387 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 1 381 1.9E-160 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABD1_32820 32126309d6574240f72c02560ddfb997 387 PIRSF PIRSF000484 1 369 7.0E-72 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ABD1_32820 32126309d6574240f72c02560ddfb997 387 SUPERFAMILY SSF51690 104 380 2.94E-91 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABD1_32820 32126309d6574240f72c02560ddfb997 387 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 382 43.08 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABD1_32820 32126309d6574240f72c02560ddfb997 387 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 381 2.6E-82 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ABD1_32820 32126309d6574240f72c02560ddfb997 387 Gene3D G3DSA:3.20.140.10 1 386 1.5E-139 T 12-10-2018 ABD1_23800 7b855e8b5696ef2b9125623189c66deb 322 Gene3D G3DSA:3.40.50.12250 43 302 3.6E-77 T 12-10-2018 ABD1_23800 7b855e8b5696ef2b9125623189c66deb 322 SUPERFAMILY SSF53807 38 304 1.69E-60 T 12-10-2018 ABD1_23800 7b855e8b5696ef2b9125623189c66deb 322 Pfam PF01497 Periplasmic binding protein 59 298 4.6E-32 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain ABD1_23800 7b855e8b5696ef2b9125623189c66deb 322 Gene3D G3DSA:3.40.50.12260 192 295 3.6E-77 T 12-10-2018 ABD1_27010 99b3f26cba1df6bb362ea12701b5f615 415 Gene3D G3DSA:1.20.1250.20 2 204 2.6E-8 T 12-10-2018 ABD1_27010 99b3f26cba1df6bb362ea12701b5f615 415 SUPERFAMILY SSF103473 8 409 4.05E-26 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_27010 99b3f26cba1df6bb362ea12701b5f615 415 Pfam PF13000 Acetyl-coenzyme A transporter 1 9 157 1.7E-21 T 12-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 ABD1_27010 99b3f26cba1df6bb362ea12701b5f615 415 Gene3D G3DSA:1.20.1250.20 223 414 5.1E-10 T 12-10-2018 ABD1_20500 29fa4f980f0a68a96c34150fd8304974 144 Pfam PF13279 Thioesterase-like superfamily 21 136 1.0E-13 T 12-10-2018 ABD1_20500 29fa4f980f0a68a96c34150fd8304974 144 SUPERFAMILY SSF54637 10 143 3.09E-35 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_20500 29fa4f980f0a68a96c34150fd8304974 144 Gene3D G3DSA:3.10.129.10 2 142 5.0E-46 T 12-10-2018 ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 Pfam PF03466 LysR substrate binding domain 89 292 1.9E-40 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 SUPERFAMILY SSF53850 90 294 3.1E-40 T 12-10-2018 ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 Gene3D G3DSA:3.40.190.10 93 290 1.1E-59 T 12-10-2018 ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 Gene3D G3DSA:1.10.10.10 4 91 2.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 Gene3D G3DSA:3.40.190.10 164 263 1.1E-59 T 12-10-2018 ABD1_33420 2a0baed6ac281b1eb9cf21e3ac646b9e 300 SUPERFAMILY SSF46785 5 89 1.4E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 28 131 4.2E-28 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 138 226 7.5E-28 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 Gene3D G3DSA:3.10.50.40 123 230 1.5E-42 T 12-10-2018 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 PRINTS PR01730 Macrophage infectivity potentiator signature 73 87 2.0E-5 T 12-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 PRINTS PR01730 Macrophage infectivity potentiator signature 24 38 2.0E-5 T 12-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 PRINTS PR01730 Macrophage infectivity potentiator signature 91 110 2.0E-5 T 12-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 Gene3D G3DSA:1.10.287.460 24 122 2.5E-25 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 ABD1_00470 84798a650ea58469fbaa5a5cdff4af13 231 SUPERFAMILY SSF54534 31 229 4.32E-61 T 12-10-2018 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 SMART SM00345 25 84 7.9E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 Gene3D G3DSA:1.10.10.10 10 90 2.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31770 90637d293d6d3aa21d4565798318e278 499 Pfam PF00155 Aminotransferase class I and II 163 458 5.6E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 SUPERFAMILY SSF53383 128 492 1.41E-85 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_31770 90637d293d6d3aa21d4565798318e278 499 Gene3D G3DSA:3.40.640.10 118 483 6.7E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 5.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 5.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABD1_31770 90637d293d6d3aa21d4565798318e278 499 SUPERFAMILY SSF46785 17 86 2.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_11390 4bbe2f098fcb68f7051cbfb9fb343bcb 104 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 12-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABD1_32760 62cea95f8c37be558ed049b4e04147db 223 Gene3D G3DSA:1.10.357.10 80 217 2.3E-10 T 12-10-2018 ABD1_32760 62cea95f8c37be558ed049b4e04147db 223 SUPERFAMILY SSF48498 104 206 1.78E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_32760 62cea95f8c37be558ed049b4e04147db 223 Gene3D G3DSA:1.10.10.60 5 79 4.3E-11 T 12-10-2018 ABD1_32760 62cea95f8c37be558ed049b4e04147db 223 SUPERFAMILY SSF46689 27 104 2.87E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 162 170 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 281 294 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 205 220 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 403 414 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 267 280 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 191 204 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 360 374 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 465 478 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 PRINTS PR00415 Aconitase family signature 138 151 6.8E-27 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Gene3D G3DSA:3.20.19.10 619 863 4.0E-84 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 SUPERFAMILY SSF53732 9 592 2.35E-186 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 534 9.1E-145 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Gene3D G3DSA:3.30.499.10 361 562 3.7E-76 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Gene3D G3DSA:3.30.499.20 4 360 1.9E-129 T 12-10-2018 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Gene3D G3DSA:1.10.1440.20 563 618 4.0E-9 T 12-10-2018 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 SUPERFAMILY SSF52016 599 862 7.65E-68 T 12-10-2018 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 Pfam PF00694 Aconitase C-terminal domain 657 788 5.0E-31 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABD1_00780 33c5102b353b19b821255f5a2dac9038 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ABD1_30620 1dbe17bba59f013262abba7fbd980be4 64 Gene3D G3DSA:1.10.10.1100 1 57 2.3E-23 T 12-10-2018 ABD1_30620 1dbe17bba59f013262abba7fbd980be4 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.3E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ABD1_16420 7acfcaea3dbc6d4e380cd91a646c6cce 206 Gene3D G3DSA:3.40.630.30 7 186 4.7E-43 T 12-10-2018 ABD1_16420 7acfcaea3dbc6d4e380cd91a646c6cce 206 SUPERFAMILY SSF55729 17 184 5.82E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_16420 7acfcaea3dbc6d4e380cd91a646c6cce 206 Pfam PF13523 Acetyltransferase (GNAT) domain 29 169 5.2E-36 T 12-10-2018 ABD1_16420 7acfcaea3dbc6d4e380cd91a646c6cce 206 SMART SM01006 24 71 3.4E-14 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 Pfam PF03466 LysR substrate binding domain 103 290 2.3E-11 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 SUPERFAMILY SSF46785 1 107 1.4E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 2.5E-108 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 Gene3D G3DSA:3.40.190.290 88 296 1.8E-72 T 12-10-2018 ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 Gene3D G3DSA:1.10.10.10 1 82 2.6E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_10650 64343be983637c5844bbfef86f73e5f4 296 SUPERFAMILY SSF53850 101 292 1.25E-16 T 12-10-2018 ABD1_02350 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Pfam PF13667 ThiC-associated domain 27 102 2.1E-33 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABD1_02350 47bcef29e53e2b91ef3cfdb6ba438b0e 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 142 590 6.7E-221 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABD1_02350 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 142 592 101.424 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABD1_02350 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Gene3D G3DSA:3.20.20.540 211 523 5.0E-157 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABD1_02350 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Pfam PF01964 Radical SAM ThiC family 143 587 3.2E-206 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABD1_01660 a04d3b5c4fb133bac992ad7707c68e84 376 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 81 295 2.1E-71 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ABD1_01660 a04d3b5c4fb133bac992ad7707c68e84 376 Pfam PF02481 DNA recombination-mediator protein A 86 285 5.1E-74 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ABD1_01660 a04d3b5c4fb133bac992ad7707c68e84 376 SUPERFAMILY SSF102405 89 295 1.68E-41 T 12-10-2018 ABD1_01660 a04d3b5c4fb133bac992ad7707c68e84 376 Gene3D G3DSA:3.40.50.450 3 297 8.8E-93 T 12-10-2018 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 220 3.6E-61 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 Gene3D G3DSA:3.40.50.1000 12 216 2.1E-63 T 12-10-2018 IPR023214 HAD superfamily ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 189 1.3E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 Gene3D G3DSA:1.10.150.240 24 94 2.1E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 9.4E-37 T 12-10-2018 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 195 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_02550 f5f5ce8d8b8015d9d4560f5a5af66d14 222 SUPERFAMILY SSF56784 7 220 5.02E-58 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_21380 19bf8ba77d7541f5f27118c7381716ed 201 Pfam PF02669 K+-transporting ATPase, c chain 17 196 2.8E-66 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABD1_21380 19bf8ba77d7541f5f27118c7381716ed 201 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 15 197 5.9E-58 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABD1_21380 19bf8ba77d7541f5f27118c7381716ed 201 PIRSF PIRSF001296 12 201 3.4E-69 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABD1_21380 19bf8ba77d7541f5f27118c7381716ed 201 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 13 197 31.582 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABD1_33670 e8e34e96c2c6c00d77ecc48a7a1aaeaa 233 SUPERFAMILY SSF53474 1 228 1.02E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_33670 e8e34e96c2c6c00d77ecc48a7a1aaeaa 233 Pfam PF07859 alpha/beta hydrolase fold 1 205 1.1E-62 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_33670 e8e34e96c2c6c00d77ecc48a7a1aaeaa 233 Gene3D G3DSA:3.40.50.1820 1 231 1.9E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_21090 09fe088c1d42bad5ec7a013eaf41cec6 239 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 1.2E-5 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_21090 09fe088c1d42bad5ec7a013eaf41cec6 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 225 3.3E-71 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ABD1_21090 09fe088c1d42bad5ec7a013eaf41cec6 239 SUPERFAMILY SSF56300 2 227 6.94E-26 T 12-10-2018 ABD1_21090 09fe088c1d42bad5ec7a013eaf41cec6 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 239 91.376 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ABD1_01090 37a0dddd595000f27f2effdaa4d7294c 427 SUPERFAMILY SSF103473 2 406 1.83E-62 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_01090 37a0dddd595000f27f2effdaa4d7294c 427 Gene3D G3DSA:1.20.1250.20 1 416 4.6E-59 T 12-10-2018 ABD1_01090 37a0dddd595000f27f2effdaa4d7294c 427 Pfam PF07690 Major Facilitator Superfamily 39 367 9.2E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_29840 dfc50300863cef29271967e461180b5e 337 Pfam PF01544 CorA-like Mg2+ transporter protein 27 332 1.3E-54 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABD1_29840 dfc50300863cef29271967e461180b5e 337 SUPERFAMILY SSF143865 2 274 1.03E-35 T 12-10-2018 ABD1_29840 dfc50300863cef29271967e461180b5e 337 Gene3D G3DSA:1.20.58.340 261 337 1.6E-15 T 12-10-2018 ABD1_29840 dfc50300863cef29271967e461180b5e 337 Gene3D G3DSA:3.30.460.20 2 138 4.1E-5 T 12-10-2018 ABD1_29840 dfc50300863cef29271967e461180b5e 337 SUPERFAMILY SSF144083 272 335 4.97E-14 T 12-10-2018 ABD1_21120 6f3dd565c2be4061d98dde9506035c62 168 Pfam PF17209 Hfq protein 7 68 8.9E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABD1_21120 6f3dd565c2be4061d98dde9506035c62 168 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABD1_21120 6f3dd565c2be4061d98dde9506035c62 168 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABD1_21120 6f3dd565c2be4061d98dde9506035c62 168 Gene3D G3DSA:2.30.30.100 1 69 1.3E-31 T 12-10-2018 ABD1_21120 6f3dd565c2be4061d98dde9506035c62 168 SUPERFAMILY SSF50182 7 67 3.07E-23 T 12-10-2018 IPR010920 LSM domain superfamily ABD1_15630 4e6aa7ed4c2c4e04ba9a36ffa8a3853c 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 7.2E-25 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABD1_15630 4e6aa7ed4c2c4e04ba9a36ffa8a3853c 142 Gene3D G3DSA:3.30.420.270 60 131 6.2E-7 T 12-10-2018 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 2.2E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 2.2E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 2.2E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 55 77 2.2E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 Gene3D G3DSA:3.40.50.620 13 226 4.7E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 61 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 407 1.3E-114 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 11 408 45.598 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 Pfam PF00579 tRNA synthetases class I (W and Y) 39 320 4.7E-76 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 Gene3D G3DSA:3.10.290.10 336 408 2.0E-7 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 SUPERFAMILY SSF55174 333 408 1.44E-9 T 12-10-2018 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 Gene3D G3DSA:1.10.240.10 227 335 3.5E-30 T 12-10-2018 ABD1_00140 9c949caa2eadf285a469e551e50eccf1 410 SUPERFAMILY SSF52374 14 319 2.52E-95 T 12-10-2018 ABD1_18180 476de7848c59a52488070c8f41d2f075 323 SUPERFAMILY SSF51735 1 320 4.57E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18180 476de7848c59a52488070c8f41d2f075 323 Gene3D G3DSA:3.90.25.10 178 315 5.4E-115 T 12-10-2018 ABD1_18180 476de7848c59a52488070c8f41d2f075 323 Gene3D G3DSA:3.40.50.720 6 305 5.4E-115 T 12-10-2018 ABD1_18180 476de7848c59a52488070c8f41d2f075 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 1.0E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_02990 cde8791f317a28a241b166bc2bc0a36c 108 Pfam PF06865 Protein of unknown function (DUF1255) 13 105 1.5E-32 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABD1_02990 cde8791f317a28a241b166bc2bc0a36c 108 Gene3D G3DSA:2.60.120.10 1 108 3.7E-47 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_02990 cde8791f317a28a241b166bc2bc0a36c 108 SUPERFAMILY SSF51182 13 105 1.08E-30 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_02990 cde8791f317a28a241b166bc2bc0a36c 108 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 12 107 25.159 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 SUPERFAMILY SSF56796 13 389 3.79E-136 T 12-10-2018 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 Gene3D G3DSA:1.20.1090.10 193 390 5.1E-78 T 12-10-2018 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 Gene3D G3DSA:3.40.50.1970 3 191 7.7E-55 T 12-10-2018 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABD1_20990 c8b94f35ddf53096674359e45ae99a3f 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 5.5E-127 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SUPERFAMILY SSF56672 524 923 1.22E-148 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:3.30.420.10 326 540 2.0E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Pfam PF01612 3'-5' exonuclease 329 515 3.3E-37 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.3E-30 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SMART SM00475 1 256 2.5E-121 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:3.30.70.370 661 919 2.5E-109 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SUPERFAMILY SSF88723 1 165 1.99E-53 T 12-10-2018 IPR029060 PIN-like domain superfamily ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SUPERFAMILY SSF53098 332 517 6.84E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:1.10.150.20 706 849 2.5E-109 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:1.20.1060.10 542 655 1.4E-38 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SMART SM00279 168 203 7.0E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SMART SM00482 683 887 7.8E-102 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 TIGRFAM TIGR00593 pola: DNA polymerase I 5 923 8.9E-294 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:1.10.150.20 169 241 8.1E-95 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.0E-50 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Pfam PF00476 DNA polymerase family A 551 921 1.4E-151 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 Gene3D G3DSA:3.40.50.1010 5 272 8.1E-95 T 12-10-2018 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 858 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 727 740 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 674 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 690 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 821 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 870 883 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 788 799 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 776 3.5E-76 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 ProSitePatterns PS00447 DNA polymerase family A signature. 751 770 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SUPERFAMILY SSF47807 166 280 6.28E-34 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABD1_06180 1447b238525c836b5c77d383493a6a89 923 SMART SM00474 329 516 5.9E-36 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 Pfam PF11104 Type IV pilus assembly protein PilM; 2 339 5.5E-136 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 SMART SM00842 2 169 0.0047 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 Gene3D G3DSA:3.30.1490.300 76 135 3.6E-87 T 12-10-2018 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 PIRSF PIRSF019169 1 340 7.3E-122 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 Gene3D G3DSA:3.30.420.40 1 337 3.6E-87 T 12-10-2018 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 SUPERFAMILY SSF53067 180 336 1.16E-23 T 12-10-2018 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 Gene3D G3DSA:3.30.420.40 176 303 3.6E-87 T 12-10-2018 ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 1 339 9.7E-113 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM ABD1_30800 81b9331d5c7891bdeafa0d83ceed8b2e 340 SUPERFAMILY SSF53067 2 166 6.15E-14 T 12-10-2018 ABD1_19700 644f785fbf85fe23465e2575d743fa2e 154 Gene3D G3DSA:1.10.10.10 3 153 6.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_19700 644f785fbf85fe23465e2575d743fa2e 154 Pfam PF01047 MarR family 51 102 1.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_19700 644f785fbf85fe23465e2575d743fa2e 154 SMART SM00347 38 138 3.3E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_19700 644f785fbf85fe23465e2575d743fa2e 154 SUPERFAMILY SSF46785 12 153 2.04E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07580 fb6fdcc3d6c59ad9a807185382eda4b0 397 Pfam PF07690 Major Facilitator Superfamily 24 230 2.3E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_07580 fb6fdcc3d6c59ad9a807185382eda4b0 397 Gene3D G3DSA:1.20.1250.20 20 200 1.0E-17 T 12-10-2018 ABD1_07580 fb6fdcc3d6c59ad9a807185382eda4b0 397 SUPERFAMILY SSF103473 23 393 3.53E-39 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_07580 fb6fdcc3d6c59ad9a807185382eda4b0 397 Gene3D G3DSA:1.20.1250.20 212 393 2.1E-20 T 12-10-2018 ABD1_09380 e282e2f54d0a33c6ff8e47b863092e94 186 SUPERFAMILY SSF52266 6 184 3.97E-49 T 12-10-2018 ABD1_09380 e282e2f54d0a33c6ff8e47b863092e94 186 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 171 1.6E-26 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABD1_09380 e282e2f54d0a33c6ff8e47b863092e94 186 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 8 18 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 ABD1_09380 e282e2f54d0a33c6ff8e47b863092e94 186 Gene3D G3DSA:3.40.50.1110 4 186 3.5E-66 T 12-10-2018 IPR036514 SGNH hydrolase superfamily ABD1_22290 7e7b763fd52919bfba40316c85c488e5 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 36 161 2.3E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ABD1_22290 7e7b763fd52919bfba40316c85c488e5 252 SUPERFAMILY SSF102588 32 244 4.84E-41 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABD1_22290 7e7b763fd52919bfba40316c85c488e5 252 Gene3D G3DSA:3.40.50.10320 29 234 2.5E-36 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABD1_31930 983ba3c047f016ce38aa09f04baf45dd 655 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 2.8E-192 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_31930 983ba3c047f016ce38aa09f04baf45dd 655 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 12-10-2018 IPR018093 BCCT transporter, conserved site ABD1_31930 983ba3c047f016ce38aa09f04baf45dd 655 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 1.8E-164 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 290 4.3E-29 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 1.5E-21 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-21 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.5E-21 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.5E-21 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.5E-21 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 Gene3D G3DSA:1.10.10.1100 331 394 1.1E-10 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 SUPERFAMILY SSF51905 1 308 4.32E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 Gene3D G3DSA:3.50.50.60 111 243 2.7E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 Gene3D G3DSA:3.50.50.60 5 286 2.7E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-10 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.0E-10 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 1.0E-10 T 12-10-2018 ABD1_13380 a67796dabf2256046bfa8b1f3a06592a 420 PIRSF PIRSF037495 1 420 6.6E-110 T 12-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 ABD1_08980 f4030bfb8e39acbbfff330cd8e1f652e 101 SUPERFAMILY SSF50022 1 101 4.98E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_08980 f4030bfb8e39acbbfff330cd8e1f652e 101 Gene3D G3DSA:2.102.10.10 1 101 1.5E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_08980 f4030bfb8e39acbbfff330cd8e1f652e 101 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 2.4E-21 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 132 22.638 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 59 75 7.3E-27 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 108 7.3E-27 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 23 47 7.3E-27 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 SUPERFAMILY SSF52374 1 130 7.62E-31 T 12-10-2018 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 Pfam PF01467 Cytidylyltransferase-like 2 107 7.9E-10 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 Gene3D G3DSA:3.40.50.620 1 135 4.3E-44 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_07950 16ba2f0456ae327d507cf94154b33abe 135 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 1 130 1.2E-43 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABD1_15750 31f5a2663ce012b74370ccc0642ad052 198 Gene3D G3DSA:3.30.479.10 1 144 4.3E-23 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ABD1_15750 31f5a2663ce012b74370ccc0642ad052 198 SUPERFAMILY SSF55620 1 145 2.61E-31 T 12-10-2018 ABD1_15750 31f5a2663ce012b74370ccc0642ad052 198 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 2.7E-26 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 430 8.6E-189 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 Gene3D G3DSA:3.90.1150.10 10 424 3.3E-176 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 SUPERFAMILY SSF53383 5 430 3.6E-129 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 Gene3D G3DSA:3.40.640.10 72 322 3.3E-176 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 Pfam PF00202 Aminotransferase class-III 35 401 7.2E-77 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_24520 4afae4018687fbed6cc1b305419f7c48 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 431 105.433 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABD1_08000 a0c17757243381c52a95ad726abb06c7 550 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 59 503 7.4E-133 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_08000 a0c17757243381c52a95ad726abb06c7 550 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 18 502 1.1E-109 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_26030 a0681e541a3165c9d6c7018e6a01ac15 168 SUPERFAMILY SSF55729 3 147 2.27E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_26030 a0681e541a3165c9d6c7018e6a01ac15 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 4.7E-12 T 12-10-2018 ABD1_26030 a0681e541a3165c9d6c7018e6a01ac15 168 Gene3D G3DSA:3.40.630.30 1 166 2.8E-46 T 12-10-2018 ABD1_16660 1c1e8f5c8fe121be1fec546cca25e710 89 Pfam PF13308 YARHG domain 29 83 9.5E-7 T 12-10-2018 IPR025582 YARHG domain ABD1_16660 1c1e8f5c8fe121be1fec546cca25e710 89 SMART SM01324 11 84 9.1E-21 T 12-10-2018 IPR025582 YARHG domain ABD1_29830 40d9ded1d1c01a4007a15cf3b837a3f5 193 Gene3D G3DSA:3.40.50.450 1 192 2.4E-74 T 12-10-2018 ABD1_29830 40d9ded1d1c01a4007a15cf3b837a3f5 193 SUPERFAMILY SSF102405 1 179 5.65E-61 T 12-10-2018 ABD1_29830 40d9ded1d1c01a4007a15cf3b837a3f5 193 Pfam PF03641 Possible lysine decarboxylase 46 175 3.4E-40 T 12-10-2018 IPR031100 LOG family ABD1_29830 40d9ded1d1c01a4007a15cf3b837a3f5 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 8.1E-61 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ABD1_24020 1361715eb21ca54182d6c726d91d293e 330 Pfam PF00487 Fatty acid desaturase 62 304 1.3E-32 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_26790 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 Pfam PF00348 Polyprenyl synthetase 36 263 1.7E-72 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABD1_26790 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 SUPERFAMILY SSF48576 6 323 2.24E-95 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABD1_26790 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 Gene3D G3DSA:1.10.600.10 1 325 3.7E-108 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABD1_26790 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABD1_26790 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABD1_05490 1ffe8931504e0830872dae2645918870 401 Gene3D G3DSA:3.30.70.360 196 310 3.1E-134 T 12-10-2018 ABD1_05490 1ffe8931504e0830872dae2645918870 401 Gene3D G3DSA:3.40.630.10 2 385 3.1E-134 T 12-10-2018 ABD1_05490 1ffe8931504e0830872dae2645918870 401 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 1 390 3.4E-112 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABD1_05490 1ffe8931504e0830872dae2645918870 401 Pfam PF01546 Peptidase family M20/M25/M40 65 388 6.5E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 ABD1_05490 1ffe8931504e0830872dae2645918870 401 SUPERFAMILY SSF55031 196 311 2.99E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABD1_05490 1ffe8931504e0830872dae2645918870 401 SUPERFAMILY SSF53187 2 392 1.09E-76 T 12-10-2018 ABD1_05490 1ffe8931504e0830872dae2645918870 401 PIRSF PIRSF001235 1 395 2.0E-121 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABD1_22610 313b2eaef8c51d8b43f027f4c3d5a4c1 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 2.2E-18 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis ABD1_22610 313b2eaef8c51d8b43f027f4c3d5a4c1 65 Pfam PF02597 ThiS family 8 65 1.2E-10 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABD1_22610 313b2eaef8c51d8b43f027f4c3d5a4c1 65 Gene3D G3DSA:3.10.20.30 1 65 9.2E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_22610 313b2eaef8c51d8b43f027f4c3d5a4c1 65 SUPERFAMILY SSF54285 2 64 1.05E-16 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 SUPERFAMILY SSF53850 81 281 1.07E-24 T 12-10-2018 ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 Pfam PF03466 LysR substrate binding domain 100 281 3.0E-20 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 Gene3D G3DSA:3.40.190.290 85 266 1.5E-25 T 12-10-2018 ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 55 4.8E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 Gene3D G3DSA:1.10.10.10 1 78 4.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_20600 cd3d647236c4851023d6915d5b0ed09f 288 SUPERFAMILY SSF46785 1 79 4.63E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 Gene3D G3DSA:3.40.50.720 2 261 5.9E-62 T 12-10-2018 ABD1_31060 df57d0219441b189716648b8c117221b 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_31060 df57d0219441b189716648b8c117221b 296 Pfam PF00106 short chain dehydrogenase 16 205 2.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 SUPERFAMILY SSF51735 13 236 2.34E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 6.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_31060 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_02070 273373e9017106d163011ff11b42bb66 361 Gene3D G3DSA:3.40.430.10 145 361 3.7E-73 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABD1_02070 273373e9017106d163011ff11b42bb66 361 SUPERFAMILY SSF53597 148 352 1.78E-52 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABD1_02070 273373e9017106d163011ff11b42bb66 361 SUPERFAMILY SSF53927 7 148 1.54E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABD1_02070 273373e9017106d163011ff11b42bb66 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABD1_02070 273373e9017106d163011ff11b42bb66 361 PIRSF PIRSF006769 2 359 2.6E-124 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ABD1_02070 273373e9017106d163011ff11b42bb66 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 353 4.1E-50 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 ABD1_02070 273373e9017106d163011ff11b42bb66 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 103 9.1E-24 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABD1_02070 273373e9017106d163011ff11b42bb66 361 Gene3D G3DSA:3.40.140.10 1 144 6.4E-51 T 12-10-2018 ABD1_02070 273373e9017106d163011ff11b42bb66 361 Pfam PF01872 RibD C-terminal domain 151 350 4.1E-43 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ABD1_02070 273373e9017106d163011ff11b42bb66 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 351 3.7E-118 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ABD1_14260 948a0a8da3534882c73ccc7989d65635 275 SUPERFAMILY SSF52096 26 218 5.97E-19 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_14260 948a0a8da3534882c73ccc7989d65635 275 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 13 274 9.4E-99 T 12-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 ABD1_14260 948a0a8da3534882c73ccc7989d65635 275 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 17 274 8.9E-92 T 12-10-2018 ABD1_14260 948a0a8da3534882c73ccc7989d65635 275 Gene3D G3DSA:3.90.226.10 2 263 6.3E-26 T 12-10-2018 ABD1_25360 17f21b7d846f43d7aa3a735d106eb1b0 401 SUPERFAMILY SSF103473 8 390 1.57E-58 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_25360 17f21b7d846f43d7aa3a735d106eb1b0 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_25360 17f21b7d846f43d7aa3a735d106eb1b0 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 381 8.0E-69 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ABD1_25360 17f21b7d846f43d7aa3a735d106eb1b0 401 Pfam PF07690 Major Facilitator Superfamily 16 358 1.4E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_25360 17f21b7d846f43d7aa3a735d106eb1b0 401 Gene3D G3DSA:1.20.1720.10 10 392 1.6E-91 T 12-10-2018 ABD1_04130 a6cd7fa7d2933edc5982e329ee23324f 79 SUPERFAMILY SSF54928 2 77 1.13E-26 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 ABD1_04130 a6cd7fa7d2933edc5982e329ee23324f 79 SMART SM00360 2 75 4.7E-27 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ABD1_04130 a6cd7fa7d2933edc5982e329ee23324f 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 71 2.6E-22 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ABD1_04130 a6cd7fa7d2933edc5982e329ee23324f 79 Gene3D G3DSA:3.30.70.330 1 79 2.0E-25 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 Gene3D G3DSA:3.40.50.7700 2 169 8.4E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 165 1.6E-64 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 SMART SM01001 10 161 3.1E-102 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 Pfam PF00731 AIR carboxylase 12 159 4.7E-63 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 SUPERFAMILY SSF52255 11 166 7.33E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 PIRSF PIRSF001338 7 167 1.0E-65 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ABD1_33790 551fc4a3e8315468e26d7fa6e0fef91b 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 165 32.101 T 12-10-2018 IPR033747 Class I PurE ABD1_27830 c22c6fdda5e0eb7c1220165c8f8e418a 486 PIRSF PIRSF006060 1 483 2.9E-82 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_27830 c22c6fdda5e0eb7c1220165c8f8e418a 486 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_27830 c22c6fdda5e0eb7c1220165c8f8e418a 486 Gene3D G3DSA:1.20.1740.10 8 479 2.5E-61 T 12-10-2018 ABD1_27830 c22c6fdda5e0eb7c1220165c8f8e418a 486 Pfam PF00324 Amino acid permease 18 472 2.1E-138 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_22160 b0e71eab3c39428d51436f266df3d1a5 212 Gene3D G3DSA:1.10.357.10 9 207 3.0E-17 T 12-10-2018 ABD1_22160 b0e71eab3c39428d51436f266df3d1a5 212 SUPERFAMILY SSF46689 17 89 2.52E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_22160 b0e71eab3c39428d51436f266df3d1a5 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 3.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_07510 9ac76ce6b1aac3397717bd8d8eaa419b 250 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 25 242 3.9E-39 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABD1_07510 9ac76ce6b1aac3397717bd8d8eaa419b 250 Pfam PF03099 Biotin/lipoate A/B protein ligase family 39 141 3.2E-9 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABD1_07510 9ac76ce6b1aac3397717bd8d8eaa419b 250 Gene3D G3DSA:3.30.930.10 1 200 4.1E-37 T 12-10-2018 ABD1_07510 9ac76ce6b1aac3397717bd8d8eaa419b 250 SUPERFAMILY SSF55681 13 188 2.65E-34 T 12-10-2018 ABD1_30030 8e13bc4c159fdd6056359fbb8388e99e 420 SUPERFAMILY SSF102114 44 266 5.3E-14 T 12-10-2018 ABD1_30030 8e13bc4c159fdd6056359fbb8388e99e 420 Gene3D G3DSA:3.20.20.70 46 193 7.8E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_30030 8e13bc4c159fdd6056359fbb8388e99e 420 SUPERFAMILY SSF47781 303 383 9.12E-13 T 12-10-2018 IPR010994 RuvA domain 2-like ABD1_30030 8e13bc4c159fdd6056359fbb8388e99e 420 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 418 2.0E-208 T 12-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative ABD1_30030 8e13bc4c159fdd6056359fbb8388e99e 420 Gene3D G3DSA:1.10.150.320 312 376 7.9E-7 T 12-10-2018 ABD1_33360 89f51de68fd8b90c45cf49b9ceee7c69 178 SUPERFAMILY SSF51261 44 177 1.52E-33 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_33360 89f51de68fd8b90c45cf49b9ceee7c69 178 Pfam PF01551 Peptidase family M23 72 166 2.9E-23 T 12-10-2018 IPR016047 Peptidase M23 ABD1_33360 89f51de68fd8b90c45cf49b9ceee7c69 178 Gene3D G3DSA:2.70.70.10 28 178 1.0E-46 T 12-10-2018 IPR011055 Duplicated hybrid motif ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 SUPERFAMILY SSF46785 2 110 1.69E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:3.40.190.10 172 260 6.0E-6 T 12-10-2018 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 Pfam PF03466 LysR substrate binding domain 86 265 4.0E-28 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:1.10.10.10 1 80 7.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 SUPERFAMILY SSF53850 87 275 8.22E-30 T 12-10-2018 ABD1_12900 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:3.40.190.10 81 171 5.4E-15 T 12-10-2018 ABD1_06420 2b16279fc0b8e85585941191dbbcb9d2 556 Gene3D G3DSA:2.40.160.60 123 556 2.9E-56 T 12-10-2018 ABD1_06420 2b16279fc0b8e85585941191dbbcb9d2 556 SUPERFAMILY SSF56935 33 554 1.88E-52 T 12-10-2018 ABD1_06420 2b16279fc0b8e85585941191dbbcb9d2 556 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 555 4.0E-70 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABD1_07370 efa4da0c6c9d17caf44b25024d9dd1dc 284 Gene3D G3DSA:3.40.50.1580 35 281 2.1E-72 T 12-10-2018 ABD1_07370 efa4da0c6c9d17caf44b25024d9dd1dc 284 SUPERFAMILY SSF53167 38 259 2.35E-44 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABD1_07370 efa4da0c6c9d17caf44b25024d9dd1dc 284 Pfam PF01048 Phosphorylase superfamily 38 254 1.8E-39 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABD1_04420 bf977998658a7a6d7845506471f65515 180 Pfam PF08238 Sel1 repeat 74 109 5.3E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04420 bf977998658a7a6d7845506471f65515 180 Pfam PF08238 Sel1 repeat 112 137 9.3 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04420 bf977998658a7a6d7845506471f65515 180 Pfam PF08238 Sel1 repeat 39 72 3.4E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04420 bf977998658a7a6d7845506471f65515 180 Gene3D G3DSA:1.25.40.10 4 180 1.3E-38 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_04420 bf977998658a7a6d7845506471f65515 180 SUPERFAMILY SSF81901 26 137 6.15E-29 T 12-10-2018 ABD1_04420 bf977998658a7a6d7845506471f65515 180 SMART SM00671 110 141 190.0 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04420 bf977998658a7a6d7845506471f65515 180 SMART SM00671 74 109 4.3E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04420 bf977998658a7a6d7845506471f65515 180 SMART SM00671 38 73 7.3E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_21590 a4b4dbfc20a7d5c8704664964c3a0db0 415 SUPERFAMILY SSF53448 49 317 3.28E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_21590 a4b4dbfc20a7d5c8704664964c3a0db0 415 Pfam PF13641 Glycosyltransferase like family 2 49 269 3.5E-38 T 12-10-2018 ABD1_21590 a4b4dbfc20a7d5c8704664964c3a0db0 415 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 8 409 8.2E-176 T 12-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 ABD1_21590 a4b4dbfc20a7d5c8704664964c3a0db0 415 Gene3D G3DSA:3.90.550.10 29 264 4.3E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 9.6E-68 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-59 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 PIRSF PIRSF002122 3 156 1.9E-58 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 SUPERFAMILY SSF47973 6 149 3.27E-59 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.166 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABD1_08130 66c99aa8d1d8d78ebc5d284ac688565f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.9E-64 T 12-10-2018 IPR023798 Ribosomal protein S7 domain ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 Gene3D G3DSA:1.10.150.170 110 209 1.5E-103 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 PIRSF PIRSF004486 1 303 1.9E-104 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 37.667 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 Pfam PF01795 MraW methylase family 2 301 1.3E-108 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 Gene3D G3DSA:3.40.50.150 6 301 1.5E-103 T 12-10-2018 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 SUPERFAMILY SSF81799 111 207 2.62E-35 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 2.0E-109 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABD1_30890 f405b8d0e8e7943572a3533086201de0 307 SUPERFAMILY SSF53335 3 302 3.66E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_21620 e1abd522fd406459c9a9eedba2e20609 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 75.471 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein ABD1_21620 e1abd522fd406459c9a9eedba2e20609 278 Pfam PF03618 Kinase/pyrophosphorylase 12 268 1.0E-75 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 103 117 3.5E-15 T 12-10-2018 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 19 29 3.5E-15 T 12-10-2018 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 33 41 3.5E-15 T 12-10-2018 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 46 57 3.5E-15 T 12-10-2018 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 Pfam PF00186 Dihydrofolate reductase 8 169 1.2E-54 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 Gene3D G3DSA:3.40.430.10 6 169 1.5E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 SUPERFAMILY SSF53597 6 169 5.05E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 ABD1_04280 a393c18ea72046ff5488d8314fdc5e45 169 PIRSF PIRSF000194 2 169 7.9E-54 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 ABD1_15510 7f65102a6e171d1343c61aded33c8ff3 76 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 1 75 3.2E-29 T 12-10-2018 IPR018714 Protein of unknown function DUF2237 ABD1_15510 7f65102a6e171d1343c61aded33c8ff3 76 Gene3D G3DSA:3.30.56.90 3 76 1.4E-31 T 12-10-2018 ABD1_08270 0fa0e6cfea0af33652da1e42d5b18521 216 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 29 207 5.5E-37 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ABD1_08270 0fa0e6cfea0af33652da1e42d5b18521 216 SUPERFAMILY SSF63848 110 206 3.92E-26 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 ABD1_08270 0fa0e6cfea0af33652da1e42d5b18521 216 Gene3D G3DSA:2.160.20.70 105 215 4.9E-26 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 ABD1_08270 0fa0e6cfea0af33652da1e42d5b18521 216 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 215 17.77 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ABD1_08270 0fa0e6cfea0af33652da1e42d5b18521 216 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 112 207 9.9E-26 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ABD1_25650 c0518ae749391a2372028095d6eae01f 381 Pfam PF12704 MacB-like periplasmic core domain 1 210 2.3E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain ABD1_25650 c0518ae749391a2372028095d6eae01f 381 Pfam PF02687 FtsX-like permease family 268 374 2.0E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABD1_25650 c0518ae749391a2372028095d6eae01f 381 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 381 9.7E-140 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 ABD1_08670 2f9a01aa4f53df86820d99cfb6c25532 461 SUPERFAMILY SSF103473 21 458 2.75E-84 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_08670 2f9a01aa4f53df86820d99cfb6c25532 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_08670 2f9a01aa4f53df86820d99cfb6c25532 461 Pfam PF00083 Sugar (and other) transporter 69 459 2.0E-52 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_08670 2f9a01aa4f53df86820d99cfb6c25532 461 Gene3D G3DSA:1.20.1250.20 33 453 1.9E-88 T 12-10-2018 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 SUPERFAMILY SSF51735 1 165 3.32E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 Gene3D G3DSA:3.30.360.10 144 306 2.5E-76 T 12-10-2018 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 Gene3D G3DSA:3.40.50.720 1 314 2.5E-76 T 12-10-2018 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 SUPERFAMILY SSF55347 144 305 1.05E-35 T 12-10-2018 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 PIRSF PIRSF036497 1 327 1.5E-69 T 12-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 5 135 9.6E-11 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ABD1_17030 1960bd6804899d1145f33be5d2d3dc2b 329 Pfam PF00742 Homoserine dehydrogenase 144 320 2.5E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 Gene3D G3DSA:3.40.1030.10 85 334 4.5E-60 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 24 77 1.6E-15 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 SUPERFAMILY SSF52418 86 331 4.71E-61 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 SUPERFAMILY SSF47648 22 81 1.22E-15 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 Gene3D G3DSA:1.20.970.10 14 82 3.9E-25 T 12-10-2018 ABD1_22790 0619c9112ad9d9be9cd17e060dd365c7 336 Pfam PF00591 Glycosyl transferase family, a/b domain 109 324 3.3E-12 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:3.90.1280.10 231 288 2.1E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:1.10.287.480 183 230 1.2E-17 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 SUPERFAMILY SSF118352 231 287 2.09E-15 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:3.55.30.10 1 175 2.4E-50 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 Pfam PF01430 Hsp33 protein 5 278 4.9E-73 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 SUPERFAMILY SSF64397 2 239 2.22E-61 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ABD1_03380 906ba7e30f469d9822698f09ee4ecb02 291 PIRSF PIRSF005261 1 289 1.2E-63 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ABD1_22860 921f8334c80716698039558126ebbe45 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_22860 921f8334c80716698039558126ebbe45 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABD1_22860 921f8334c80716698039558126ebbe45 452 Gene3D G3DSA:1.10.287.130 174 290 2.0E-20 T 12-10-2018 ABD1_22860 921f8334c80716698039558126ebbe45 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 288 1.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_22860 921f8334c80716698039558126ebbe45 452 SUPERFAMILY SSF47384 208 290 1.22E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABD1_22860 921f8334c80716698039558126ebbe45 452 SUPERFAMILY SSF55874 281 446 8.12E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_22860 921f8334c80716698039558126ebbe45 452 Gene3D G3DSA:3.30.565.10 291 446 5.3E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_22860 921f8334c80716698039558126ebbe45 452 SMART SM00387 339 448 2.6E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_22860 921f8334c80716698039558126ebbe45 452 SMART SM00388 224 290 1.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABD1_22860 921f8334c80716698039558126ebbe45 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 446 2.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_23810 304c6a427b6628ea70194efbc1b9d3ca 256 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_23810 304c6a427b6628ea70194efbc1b9d3ca 256 SUPERFAMILY SSF52540 2 228 4.31E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_23810 304c6a427b6628ea70194efbc1b9d3ca 256 SMART SM00382 26 213 3.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_23810 304c6a427b6628ea70194efbc1b9d3ca 256 Pfam PF00005 ABC transporter 17 164 7.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_23810 304c6a427b6628ea70194efbc1b9d3ca 256 Gene3D G3DSA:3.40.50.300 1 252 2.5E-69 T 12-10-2018 ABD1_16600 95641c518f237ec37312eaca06c7a08a 372 Pfam PF12698 ABC-2 family transporter protein 33 364 5.4E-44 T 12-10-2018 ABD1_17400 143ede3bda4c01965bf93d0e8852c3ce 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 1.9E-89 T 12-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 ABD1_17400 143ede3bda4c01965bf93d0e8852c3ce 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 3.1E-42 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 ABD1_17400 143ede3bda4c01965bf93d0e8852c3ce 163 Gene3D G3DSA:3.10.450.50 6 163 7.3E-40 T 12-10-2018 ABD1_17400 143ede3bda4c01965bf93d0e8852c3ce 163 SUPERFAMILY SSF54427 1 162 5.92E-44 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_06890 5f3deadd8ee263a937f95e6b408ec014 228 SUPERFAMILY SSF47090 165 220 2.88E-11 T 12-10-2018 IPR036365 PGBD-like superfamily ABD1_06890 5f3deadd8ee263a937f95e6b408ec014 228 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 6 221 4.9E-45 T 12-10-2018 IPR023928 Conserved hypothetical protein CHP03979 ABD1_06890 5f3deadd8ee263a937f95e6b408ec014 228 Gene3D G3DSA:1.10.101.10 161 220 5.8E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABD1_06890 5f3deadd8ee263a937f95e6b408ec014 228 Pfam PF01471 Putative peptidoglycan binding domain 165 218 8.7E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like ABD1_26810 290de64ca09c339454a5259765845f9e 208 Gene3D G3DSA:1.20.144.10 109 206 1.9E-21 T 12-10-2018 ABD1_26810 290de64ca09c339454a5259765845f9e 208 Gene3D G3DSA:1.20.144.10 5 108 2.0E-6 T 12-10-2018 ABD1_26810 290de64ca09c339454a5259765845f9e 208 Pfam PF01569 PAP2 superfamily 82 195 7.8E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_26810 290de64ca09c339454a5259765845f9e 208 SUPERFAMILY SSF48317 4 200 5.1E-34 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABD1_26810 290de64ca09c339454a5259765845f9e 208 SMART SM00014 79 191 3.3E-16 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_27210 52391da035f48939de5eba73a02b6868 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 4.5E-48 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ABD1_27210 52391da035f48939de5eba73a02b6868 244 PIRSF PIRSF000857 6 244 2.6E-77 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABD1_27210 52391da035f48939de5eba73a02b6868 244 SUPERFAMILY SSF52402 13 201 3.14E-48 T 12-10-2018 ABD1_27210 52391da035f48939de5eba73a02b6868 244 Gene3D G3DSA:3.40.50.620 6 244 3.5E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_27210 52391da035f48939de5eba73a02b6868 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 1.0E-77 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 SUPERFAMILY SSF51905 148 471 2.7E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 134 4.4E-37 T 12-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 Gene3D G3DSA:3.90.190.10 1 138 8.8E-39 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 Gene3D G3DSA:3.50.50.60 262 402 1.4E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 Gene3D G3DSA:3.50.50.60 150 467 1.4E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 458 2.1E-14 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 SUPERFAMILY SSF52799 5 98 1.13E-5 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_17010 265e37da0e6e962606fb4b1eecb3064b 551 Pfam PF04273 Putative phosphatase (DUF442) 3 109 3.7E-32 T 12-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 Gene3D G3DSA:3.90.190.20 291 425 6.8E-28 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 PIRSF PIRSF001563 5 428 2.3E-107 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 Pfam PF08245 Mur ligase middle domain 53 267 2.5E-16 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 SUPERFAMILY SSF53244 291 425 1.58E-25 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 Gene3D G3DSA:3.40.1190.10 2 290 3.7E-89 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 423 1.9E-103 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ABD1_28110 6342a055bc51eeefcd305993e1b09c66 428 SUPERFAMILY SSF53623 11 288 9.16E-84 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_04600 0b019601f6da218f6ecd495f8ead036b 542 Gene3D G3DSA:3.40.605.10 67 502 3.4E-102 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_04600 0b019601f6da218f6ecd495f8ead036b 542 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 314 325 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_04600 0b019601f6da218f6ecd495f8ead036b 542 Pfam PF00171 Aldehyde dehydrogenase family 64 507 9.0E-97 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_04600 0b019601f6da218f6ecd495f8ead036b 542 SUPERFAMILY SSF53720 34 508 3.27E-102 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_04600 0b019601f6da218f6ecd495f8ead036b 542 Gene3D G3DSA:3.40.309.10 290 481 3.4E-102 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 Pfam PF00089 Trypsin 44 242 3.8E-19 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 54 69 2.5E-9 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 198 210 2.5E-9 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 112 126 2.5E-9 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 199 210 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 SUPERFAMILY SSF50494 48 238 4.43E-21 T 12-10-2018 IPR009003 Peptidase S1, PA clan ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 Gene3D G3DSA:2.40.10.10 143 249 1.5E-6 T 12-10-2018 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 Gene3D G3DSA:2.40.10.10 42 142 2.9E-12 T 12-10-2018 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 SMART SM00020 16 240 7.4E-5 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 ABD1_23980 f065d717beb67f361b656c2c744ecc61 307 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 ABD1_31130 752b71d1c567921290d5ea687518a1aa 127 Pfam PF12568 Acetyltransferase (GNAT) domain 3 98 3.2E-11 T 12-10-2018 IPR000182 GNAT domain ABD1_31130 752b71d1c567921290d5ea687518a1aa 127 Gene3D G3DSA:3.40.630.30 1 111 9.7E-17 T 12-10-2018 ABD1_31130 752b71d1c567921290d5ea687518a1aa 127 SUPERFAMILY SSF55729 1 107 2.99E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_10800 5986619b63302a238ea24a2fc8013313 704 Gene3D G3DSA:2.170.130.10 43 171 5.6E-33 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_10800 5986619b63302a238ea24a2fc8013313 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 161 1.2E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_10800 5986619b63302a238ea24a2fc8013313 704 Pfam PF00593 TonB dependent receptor 254 703 3.1E-65 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_10800 5986619b63302a238ea24a2fc8013313 704 Gene3D G3DSA:2.40.170.20 172 704 1.0E-129 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_10800 5986619b63302a238ea24a2fc8013313 704 SUPERFAMILY SSF56935 29 704 3.66E-138 T 12-10-2018 ABD1_10800 5986619b63302a238ea24a2fc8013313 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 704 1.6E-104 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_12790 68831045e2477a06d32047c073a964d7 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 89 1.9E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_12790 68831045e2477a06d32047c073a964d7 218 SUPERFAMILY SSF46689 38 104 1.13E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_12790 68831045e2477a06d32047c073a964d7 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 66 89 1.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_12790 68831045e2477a06d32047c073a964d7 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 58 1.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_12790 68831045e2477a06d32047c073a964d7 218 Gene3D G3DSA:1.10.357.10 16 213 2.0E-20 T 12-10-2018 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 Pfam PF00425 chorismate binding enzyme 221 480 4.0E-92 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABD1_02560 080030ae6525c7a30b51d824a539303b 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 3.3E-37 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 SUPERFAMILY SSF56322 15 490 5.49E-153 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 7.2E-162 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 Gene3D G3DSA:3.60.120.10 1 494 3.3E-175 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 2.3E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 2.3E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 2.3E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_02560 080030ae6525c7a30b51d824a539303b 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 2.3E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 Pfam PF01687 Riboflavin kinase 180 323 1.1E-26 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 Gene3D G3DSA:3.40.50.620 6 181 9.9E-59 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 PIRSF PIRSF004491 2 333 6.6E-108 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 Pfam PF06574 FAD synthetase 16 163 2.3E-49 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 324 7.0E-73 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 SUPERFAMILY SSF52374 18 172 7.88E-32 T 12-10-2018 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 SMART SM00904 179 326 1.3E-42 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 SUPERFAMILY SSF82114 171 328 3.71E-33 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABD1_00200 e77bbcb8498e3a0cff50329973af9f06 333 Gene3D G3DSA:2.40.30.30 182 332 3.9E-26 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 PIRSF PIRSF006621 3 334 1.2E-75 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 Gene3D G3DSA:1.20.120.1460 254 327 4.8E-18 T 12-10-2018 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 320 3.3E-141 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 Gene3D G3DSA:3.20.20.70 10 251 6.2E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 331 49.076 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 Pfam PF01207 Dihydrouridine synthase (Dus) 17 313 3.0E-87 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 SUPERFAMILY SSF51395 13 320 5.33E-70 T 12-10-2018 ABD1_05270 b05e965d53764773e127c4fd951e5566 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 Pfam PF00361 Proton-conducting membrane transporter 126 412 3.3E-63 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 Pfam PF13244 Domain of unknown function (DUF4040) 620 681 5.0E-18 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 4.6E-36 T 12-10-2018 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 256 278 2.6E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 97 2.6E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 101 1.5E-7 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_03170 6c594209a56faac8c6b53d06032676cf 945 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 794 920 9.7E-34 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ABD1_22480 0d3acc382fc3a6000dee34431a18fe52 156 Pfam PF02674 Colicin V production protein 4 103 3.4E-14 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ABD1_28200 e4e09fef081f2cf3632277b5e242fd51 640 Gene3D G3DSA:2.170.130.10 40 164 3.3E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_28200 e4e09fef081f2cf3632277b5e242fd51 640 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 2.4E-22 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_28200 e4e09fef081f2cf3632277b5e242fd51 640 Pfam PF00593 TonB dependent receptor 238 639 2.2E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_28200 e4e09fef081f2cf3632277b5e242fd51 640 Gene3D G3DSA:2.40.170.20 167 613 3.8E-71 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_28200 e4e09fef081f2cf3632277b5e242fd51 640 SUPERFAMILY SSF56935 40 639 1.04E-100 T 12-10-2018 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 ProSitePatterns PS00768 Transthyretin signature 1. 5 20 - T 12-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 PRINTS PR00189 Transthyretin signature 1 21 1.8E-8 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 PRINTS PR00189 Transthyretin signature 85 107 1.8E-8 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 Pfam PF00576 HIUase/Transthyretin family 2 106 9.7E-36 T 12-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 Gene3D G3DSA:2.60.40.180 1 107 1.1E-38 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 SMART SM00095 2 106 0.0053 T 12-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 107 5.1E-39 T 12-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABD1_32490 e8fbc06ca00748012e00b2a4e18f6b05 107 SUPERFAMILY SSF49472 2 107 1.12E-37 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABD1_06970 cbef5093e635e8bd795ac00674c144fc 427 SUPERFAMILY SSF47240 69 401 5.13E-98 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_06970 cbef5093e635e8bd795ac00674c144fc 427 PIRSF PIRSF000355 78 427 4.9E-139 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06970 cbef5093e635e8bd795ac00674c144fc 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 395 2.3E-86 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABD1_06970 cbef5093e635e8bd795ac00674c144fc 427 Gene3D G3DSA:1.10.620.20 85 421 8.4E-111 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ABD1_27180 fd394f05474ba1cfacd00a2cd81efc29 232 Pfam PF02525 Flavodoxin-like fold 1 205 3.5E-51 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_27180 fd394f05474ba1cfacd00a2cd81efc29 232 SUPERFAMILY SSF52218 1 230 4.99E-65 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_27180 fd394f05474ba1cfacd00a2cd81efc29 232 Gene3D G3DSA:3.40.50.360 1 231 4.8E-76 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_22630 ee388971b9b8148ee25bd470f029ea0c 207 SUPERFAMILY SSF109604 23 205 3.3E-26 T 12-10-2018 ABD1_22630 ee388971b9b8148ee25bd470f029ea0c 207 Gene3D G3DSA:1.10.3210.10 20 181 3.9E-7 T 12-10-2018 ABD1_22630 ee388971b9b8148ee25bd470f029ea0c 207 PIRSF PIRSF035170 14 207 7.1E-47 T 12-10-2018 IPR009218 Predicted HD phosphohydrolase ABD1_18570 bd6abb73c18d6138497b8df8665181e9 412 Gene3D G3DSA:3.20.20.70 1 355 7.0E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_18570 bd6abb73c18d6138497b8df8665181e9 412 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 341 1.9E-57 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABD1_18570 bd6abb73c18d6138497b8df8665181e9 412 SUPERFAMILY SSF51395 11 344 1.01E-103 T 12-10-2018 ABD1_04620 2aa6a93fad64bb1bc5b8b4db938d4f9a 437 SUPERFAMILY SSF53474 35 307 3.21E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_04620 2aa6a93fad64bb1bc5b8b4db938d4f9a 437 SUPERFAMILY SSF141371 325 430 1.92E-5 T 12-10-2018 ABD1_04620 2aa6a93fad64bb1bc5b8b4db938d4f9a 437 Pfam PF00561 alpha/beta hydrolase fold 58 293 2.1E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_04620 2aa6a93fad64bb1bc5b8b4db938d4f9a 437 Gene3D G3DSA:3.40.50.1820 26 308 3.6E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_20240 cba07cb9cd0451697a202e01530760a1 162 Pfam PF02391 MoaE protein 7 119 4.9E-34 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABD1_20240 cba07cb9cd0451697a202e01530760a1 162 Gene3D G3DSA:3.90.1170.40 1 136 2.1E-42 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABD1_20240 cba07cb9cd0451697a202e01530760a1 162 SUPERFAMILY SSF54690 7 139 3.79E-39 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 25 1289 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 SUPERFAMILY SSF52540 69 572 5.96E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 SMART SM00847 473 564 1.2E-33 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 SMART SM00490 312 413 1.0E-12 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 SMART SM00382 84 393 5.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 SMART SM00487 67 251 4.1E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Pfam PF00270 DEAD/DEAH box helicase 74 225 3.2E-7 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Pfam PF04408 Helicase associated domain (HA2) 475 559 3.3E-16 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Gene3D G3DSA:1.20.120.1080 456 559 5.3E-18 T 12-10-2018 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Pfam PF00271 Helicase conserved C-terminal domain 297 412 2.4E-11 T 12-10-2018 IPR001650 Helicase, C-terminal ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 628 703 1.0E-14 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Gene3D G3DSA:3.40.50.300 245 430 6.2E-52 T 12-10-2018 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Gene3D G3DSA:3.40.50.300 19 244 9.2E-76 T 12-10-2018 ABD1_12160 4fa05e501446d92bdfb5dfc0305c46ca 1294 Pfam PF11898 Domain of unknown function (DUF3418) 718 1289 1.3E-147 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal ABD1_05200 25f34196a1117e630733bcdf63b68c4c 313 Gene3D G3DSA:3.90.640.20 205 299 1.1E-27 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily ABD1_05200 25f34196a1117e630733bcdf63b68c4c 313 Gene3D G3DSA:3.30.565.40 42 203 2.5E-29 T 12-10-2018 ABD1_05200 25f34196a1117e630733bcdf63b68c4c 313 Pfam PF11738 Protein of unknown function (DUF3298) 207 285 2.7E-10 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 ABD1_01870 e705d31771e7093e02845af162d81d91 207 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 23 197 2.8E-59 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ABD1_01870 e705d31771e7093e02845af162d81d91 207 SUPERFAMILY SSF102405 20 198 2.29E-59 T 12-10-2018 ABD1_01870 e705d31771e7093e02845af162d81d91 207 Pfam PF03641 Possible lysine decarboxylase 66 193 6.7E-41 T 12-10-2018 IPR031100 LOG family ABD1_01870 e705d31771e7093e02845af162d81d91 207 Gene3D G3DSA:3.40.50.450 23 206 3.9E-70 T 12-10-2018 ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 9.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 9.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 SUPERFAMILY SSF48498 78 186 1.21E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 5.0E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 Gene3D G3DSA:1.10.357.10 2 192 1.1E-47 T 12-10-2018 ABD1_02370 a35792735272cc19bbf2fccbd34f5d7b 193 SUPERFAMILY SSF46689 4 75 6.67E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 PIRSF PIRSF006621 1 314 4.9E-77 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 Gene3D G3DSA:3.20.20.70 1 241 4.6E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 SUPERFAMILY SSF51395 2 309 2.93E-69 T 12-10-2018 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 Pfam PF01207 Dihydrouridine synthase (Dus) 4 309 2.7E-73 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 Gene3D G3DSA:1.20.225.30 245 313 1.9E-10 T 12-10-2018 ABD1_07470 5e791164717ebe945ee338e5453cce62 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 49.37 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 Gene3D G3DSA:3.40.50.720 1 250 1.4E-67 T 12-10-2018 ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 4.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 SUPERFAMILY SSF51735 6 248 3.4E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 245 2.0E-57 T 12-10-2018 ABD1_17340 fe45d09a22a94e2085e66a3a600751a1 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_27090 75a56ef90663eb576a9a44433bf2e3f0 430 PIRSF PIRSF006060 1 429 8.9E-77 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_27090 75a56ef90663eb576a9a44433bf2e3f0 430 ProSitePatterns PS00218 Amino acid permeases signature. 20 50 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_27090 75a56ef90663eb576a9a44433bf2e3f0 430 Pfam PF00324 Amino acid permease 1 399 8.0E-109 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_27090 75a56ef90663eb576a9a44433bf2e3f0 430 Gene3D G3DSA:1.20.1740.10 1 430 1.7E-66 T 12-10-2018 ABD1_00350 eb054dea1a971cdbb68f2e15529f0e87 205 Gene3D G3DSA:3.40.30.10 24 205 2.6E-54 T 12-10-2018 ABD1_00350 eb054dea1a971cdbb68f2e15529f0e87 205 PIRSF PIRSF001488 1 205 4.1E-51 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL ABD1_00350 eb054dea1a971cdbb68f2e15529f0e87 205 SUPERFAMILY SSF52833 24 185 2.25E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_00350 eb054dea1a971cdbb68f2e15529f0e87 205 Pfam PF01323 DSBA-like thioredoxin domain 89 187 7.6E-17 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ABD1_18600 4a06ab65769425ec7c31730d4542eef5 524 Pfam PF00171 Aldehyde dehydrogenase family 17 456 5.8E-49 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_18600 4a06ab65769425ec7c31730d4542eef5 524 Gene3D G3DSA:3.40.309.10 265 452 5.0E-203 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_18600 4a06ab65769425ec7c31730d4542eef5 524 Gene3D G3DSA:3.40.605.10 42 517 5.0E-203 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_18600 4a06ab65769425ec7c31730d4542eef5 524 SUPERFAMILY SSF53720 20 516 8.51E-101 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_01690 eeca0bbefb1c23127f3d358a7c31e210 142 Pfam PF11162 Protein of unknown function (DUF2946) 13 139 6.5E-8 T 12-10-2018 IPR021333 Protein of unknown function DUF2946 ABD1_00370 36161d05bff9630f48158c1507230e97 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_00370 36161d05bff9630f48158c1507230e97 212 SUPERFAMILY SSF46689 2 76 2.13E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_00370 36161d05bff9630f48158c1507230e97 212 Gene3D G3DSA:1.10.357.10 53 212 7.0E-38 T 12-10-2018 ABD1_00370 36161d05bff9630f48158c1507230e97 212 Gene3D G3DSA:1.10.10.60 1 52 1.4E-25 T 12-10-2018 ABD1_16610 bb10c4700eed77e96ace72c7448c7135 280 Pfam PF10977 Protein of unknown function (DUF2797) 38 276 5.5E-91 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 TIGRFAM TIGR01814 kynureninase: kynureninase 10 399 2.3E-100 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 Gene3D G3DSA:3.40.640.10 41 303 6.4E-158 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 PIRSF PIRSF038800 1 407 1.3E-142 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 Gene3D G3DSA:3.90.1150.10 11 399 6.4E-158 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 SUPERFAMILY SSF53383 3 398 1.45E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 33.409 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABD1_19800 46a4a0ea800ef1ed552a5a858e78a7d9 416 Pfam PF00266 Aminotransferase class-V 79 320 2.2E-15 T 12-10-2018 IPR000192 Aminotransferase class V domain ABD1_15050 59504fd03bd01a57b87bec63f596a323 309 SUPERFAMILY SSF103481 192 289 6.54E-12 T 12-10-2018 ABD1_15050 59504fd03bd01a57b87bec63f596a323 309 Pfam PF00892 EamA-like transporter family 11 141 6.1E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_15050 59504fd03bd01a57b87bec63f596a323 309 Pfam PF00892 EamA-like transporter family 156 289 3.5E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_15050 59504fd03bd01a57b87bec63f596a323 309 SUPERFAMILY SSF103481 48 145 2.09E-13 T 12-10-2018 ABD1_21440 901f83bcd9fa22296a3ee994efc19b92 258 Gene3D G3DSA:3.40.50.720 12 258 1.6E-82 T 12-10-2018 ABD1_21440 901f83bcd9fa22296a3ee994efc19b92 258 SUPERFAMILY SSF69572 8 256 4.19E-84 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABD1_21440 901f83bcd9fa22296a3ee994efc19b92 258 Pfam PF00899 ThiF family 20 252 2.8E-66 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABD1_15700 26356ec7a86265c94ac1a637dd1f9bb2 202 SUPERFAMILY SSF46689 3 74 1.23E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_15700 26356ec7a86265c94ac1a637dd1f9bb2 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_15700 26356ec7a86265c94ac1a637dd1f9bb2 202 Gene3D G3DSA:1.10.357.10 1 193 1.7E-17 T 12-10-2018 ABD1_15700 26356ec7a86265c94ac1a637dd1f9bb2 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_15700 26356ec7a86265c94ac1a637dd1f9bb2 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_28210 77592296d803a8fbf557ced16cf3d14b 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 3.1E-51 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABD1_28210 77592296d803a8fbf557ced16cf3d14b 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 186 3.0E-76 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABD1_28210 77592296d803a8fbf557ced16cf3d14b 192 SUPERFAMILY SSF89028 7 185 1.2E-56 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABD1_28210 77592296d803a8fbf557ced16cf3d14b 192 Gene3D G3DSA:1.20.1200.10 17 189 1.3E-54 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABD1_28210 77592296d803a8fbf557ced16cf3d14b 192 Pfam PF01923 Cobalamin adenosyltransferase 8 172 3.0E-54 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 Gene3D G3DSA:3.20.20.70 1 206 7.0E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 203 1.1E-72 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 SUPERFAMILY SSF51569 4 203 7.87E-64 T 12-10-2018 ABD1_04570 46cf8c6a67df166b4044f988b84f5504 206 Pfam PF01081 KDPG and KHG aldolase 4 199 4.9E-66 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 SUPERFAMILY SSF53720 25 507 5.11E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 30 505 3.4E-205 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 Pfam PF00171 Aldehyde dehydrogenase family 38 501 5.1E-146 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 Gene3D G3DSA:3.40.605.10 46 482 4.6E-163 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABD1_22330 2eaed72f57a233a5e690269fabd315c6 522 Gene3D G3DSA:3.40.309.10 272 474 4.6E-163 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Pfam PF01565 FAD binding domain 45 163 1.3E-7 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 7 564 56.917 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 PIRSF PIRSF000101 1 565 4.8E-270 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Gene3D G3DSA:3.30.43.10 2 100 5.9E-12 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 SUPERFAMILY SSF55103 274 563 5.89E-106 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 SUPERFAMILY SSF56176 7 269 2.57E-69 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Gene3D G3DSA:3.30.465.10 103 266 4.4E-74 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Gene3D G3DSA:3.30.1370.20 431 515 4.1E-40 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 275 563 1.7E-134 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Gene3D G3DSA:3.30.70.610 267 344 5.0E-14 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_00730 10f44ccebb2f81e0ee27b649f40d2d10 568 Gene3D G3DSA:3.30.70.610 359 430 3.0E-18 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 ABD1_30520 9b0c22abc4c2c999c4f9a58a0289579e 1268 Pfam PF13519 von Willebrand factor type A domain 51 102 2.4E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A ABD1_30520 9b0c22abc4c2c999c4f9a58a0289579e 1268 SUPERFAMILY SSF53300 49 161 4.77E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABD1_30520 9b0c22abc4c2c999c4f9a58a0289579e 1268 Pfam PF05567 Neisseria PilC beta-propeller domain 699 948 1.6E-14 T 12-10-2018 IPR008707 PilC beta-propeller domain ABD1_30520 9b0c22abc4c2c999c4f9a58a0289579e 1268 Gene3D G3DSA:3.40.50.410 48 171 1.5E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABD1_14250 330c598c6286b9bdb5c73b1422cbc335 283 Gene3D G3DSA:3.90.226.10 4 241 1.4E-52 T 12-10-2018 ABD1_14250 330c598c6286b9bdb5c73b1422cbc335 283 Pfam PF01039 Carboxyl transferase domain 17 275 1.8E-17 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABD1_14250 330c598c6286b9bdb5c73b1422cbc335 283 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 12 282 1.0E-120 T 12-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 ABD1_14250 330c598c6286b9bdb5c73b1422cbc335 283 SUPERFAMILY SSF52096 8 235 1.78E-38 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 SUPERFAMILY SSF75516 4 165 1.09E-42 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 1.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 SMART SM00421 175 232 2.0E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 Pfam PF03472 Autoinducer binding domain 19 160 5.2E-39 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 SUPERFAMILY SSF46894 172 238 9.52E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 Gene3D G3DSA:1.10.10.10 172 238 5.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 2.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 2.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 2.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 Gene3D G3DSA:3.30.450.80 3 169 2.8E-55 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily ABD1_01170 6b666b42f8ded8b230dc129b3258fa59 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 192 219 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 Gene3D G3DSA:3.40.50.300 3 243 7.2E-69 T 12-10-2018 ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 PIRSF PIRSF039085 1 245 3.8E-100 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 Pfam PF00005 ABC transporter 20 167 1.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 SMART SM00382 28 215 5.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_14930 0303cd8734f0dea08365ca040507f1e3 247 SUPERFAMILY SSF52540 3 230 6.78E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_26440 e8aab121a2d5205db3b292e6e1ede593 324 SUPERFAMILY SSF56300 13 244 2.61E-26 T 12-10-2018 ABD1_26440 e8aab121a2d5205db3b292e6e1ede593 324 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 12 243 1.3E-42 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA ABD1_26440 e8aab121a2d5205db3b292e6e1ede593 324 SMART SM00854 8 244 2.7E-45 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA ABD1_21230 40e8e71b627cad33f2c69bc9519a3ce1 264 Pfam PF10670 Domain of unknown function (DUF4198) 17 241 5.0E-18 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 ABD1_01890 20c7dc777255225318a068f4b9d449e3 155 Pfam PF02810 SEC-C motif 135 152 2.4E-8 T 12-10-2018 IPR004027 SEC-C motif ABD1_01890 20c7dc777255225318a068f4b9d449e3 155 SUPERFAMILY SSF54427 26 129 9.64E-34 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_01890 20c7dc777255225318a068f4b9d449e3 155 Gene3D G3DSA:3.10.450.50 1 155 1.1E-57 T 12-10-2018 ABD1_01890 20c7dc777255225318a068f4b9d449e3 155 SUPERFAMILY SSF103642 131 154 2.75E-8 T 12-10-2018 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Gene3D G3DSA:2.120.10.90 501 736 3.8E-13 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 2.2E-303 T 12-10-2018 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Gene3D G3DSA:3.30.1360.40 239 332 2.3E-175 T 12-10-2018 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Gene3D G3DSA:1.10.268.10 370 455 2.3E-175 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Gene3D G3DSA:3.90.199.10 33 484 2.3E-175 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 SUPERFAMILY SSF56719 32 484 2.75E-153 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 33.062 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 SMART SM00434 12 462 4.0E-219 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 621 4.1 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 7.0E-6 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 SUPERFAMILY SSF101904 498 735 9.16E-46 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABD1_01920 526a90adadf32688a23b96adb7d117f7 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 5.5E-135 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABD1_33130 47f09c87d161108af29ad0a70aa559e8 227 Pfam PF08291 Peptidase M15 103 180 5.2E-9 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 ABD1_33130 47f09c87d161108af29ad0a70aa559e8 227 Gene3D G3DSA:3.30.1380.10 79 216 5.6E-7 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABD1_33130 47f09c87d161108af29ad0a70aa559e8 227 SUPERFAMILY SSF55166 81 220 3.77E-16 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABD1_10370 3d124ccfe4bff64fbd80ba6051d4aff3 152 Gene3D G3DSA:1.10.260.40 15 110 1.9E-13 T 12-10-2018 ABD1_10370 3d124ccfe4bff64fbd80ba6051d4aff3 152 Pfam PF12844 Helix-turn-helix domain 55 103 3.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_10370 3d124ccfe4bff64fbd80ba6051d4aff3 152 SUPERFAMILY SSF47413 55 106 1.89E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_10370 3d124ccfe4bff64fbd80ba6051d4aff3 152 SMART SM00530 57 114 0.0027 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_19160 ad83d17fcaadfbf01a14d954cc1a583f 225 Pfam PF04239 Protein of unknown function (DUF421) 101 184 3.3E-13 T 12-10-2018 IPR007353 Protein of unknown function DUF421 ABD1_19160 ad83d17fcaadfbf01a14d954cc1a583f 225 Gene3D G3DSA:3.30.240.20 92 165 8.3E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ABD1_14940 c88f6dcd47e09fd66da4eafbb27a215b 440 SUPERFAMILY SSF56935 89 440 2.34E-24 T 12-10-2018 ABD1_25660 d7d7146e6182753ecf3c95f2f0cd4aef 302 Pfam PF00892 EamA-like transporter family 12 137 2.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_25660 d7d7146e6182753ecf3c95f2f0cd4aef 302 Pfam PF00892 EamA-like transporter family 149 285 1.1E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_25660 d7d7146e6182753ecf3c95f2f0cd4aef 302 SUPERFAMILY SSF103481 40 142 4.71E-14 T 12-10-2018 ABD1_25660 d7d7146e6182753ecf3c95f2f0cd4aef 302 SUPERFAMILY SSF103481 193 288 8.11E-12 T 12-10-2018 ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 Pfam PF00593 TonB dependent receptor 328 755 1.5E-35 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 Gene3D G3DSA:2.40.170.20 220 757 8.8E-84 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 740 757 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 110 205 2.5E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 Gene3D G3DSA:2.170.130.10 81 217 2.0E-17 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 SUPERFAMILY SSF56935 68 757 1.49E-104 T 12-10-2018 ABD1_23790 fa89df85b5c241e3c1eeafb763174559 757 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 110 757 4.4E-117 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_26450 b8356f7354016491b0aceabb84ef7393 500 Gene3D G3DSA:1.20.1530.20 2 418 1.9E-7 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_26450 b8356f7354016491b0aceabb84ef7393 500 Pfam PF00999 Sodium/hydrogen exchanger family 16 409 1.4E-35 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABD1_13640 603f727ac750218a97bbdaf0bc430894 127 Pfam PF11042 Protein of unknown function (DUF2750) 20 119 1.7E-27 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF00005 ABC transporter 340 473 2.5E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF12848 ABC transporter 230 304 1.1E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 Gene3D G3DSA:3.40.50.300 287 552 2.0E-74 T 12-10-2018 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 SUPERFAMILY SSF52540 302 531 3.55E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 2.9E-290 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF00005 ABC transporter 22 191 1.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 SUPERFAMILY SSF52540 9 244 9.61E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 SMART SM00382 348 523 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 SMART SM00382 31 236 4.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_31040 626394f40b02730cf0f0b5457f110fa3 553 Gene3D G3DSA:3.40.50.300 1 286 4.7E-85 T 12-10-2018 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 205 1.1E-5 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 Gene3D G3DSA:1.10.357.10 68 207 1.9E-20 T 12-10-2018 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 2.5E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 SUPERFAMILY SSF48498 113 202 5.66E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 Gene3D G3DSA:1.10.10.60 7 63 2.8E-19 T 12-10-2018 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 SUPERFAMILY SSF46689 9 85 2.49E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_33520 eaaac9c471b67e3c6c7071b886c8ed38 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20080 554f77041476054b14efb013466dc8cc 160 SUPERFAMILY SSF69765 4 159 6.93E-66 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_20080 554f77041476054b14efb013466dc8cc 160 Gene3D G3DSA:3.30.1330.50 2 160 2.6E-68 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_20080 554f77041476054b14efb013466dc8cc 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 2.3E-67 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_20080 554f77041476054b14efb013466dc8cc 160 Pfam PF02542 YgbB family 5 158 8.6E-67 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_20080 554f77041476054b14efb013466dc8cc 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.725 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_20080 554f77041476054b14efb013466dc8cc 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABD1_18890 090d29d29cdcbe7e8c9587695f83c3fc 449 SUPERFAMILY SSF103473 11 431 3.53E-63 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18890 090d29d29cdcbe7e8c9587695f83c3fc 449 Gene3D G3DSA:1.20.1250.20 11 221 6.4E-43 T 12-10-2018 ABD1_18890 090d29d29cdcbe7e8c9587695f83c3fc 449 Gene3D G3DSA:1.20.1250.20 241 438 5.4E-21 T 12-10-2018 ABD1_18890 090d29d29cdcbe7e8c9587695f83c3fc 449 Pfam PF07690 Major Facilitator Superfamily 27 391 1.6E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Pfam PF01804 Penicillin amidase 1 732 3.0E-116 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Gene3D G3DSA:1.10.439.10 1 106 1.0E-22 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Gene3D G3DSA:1.10.287.150 107 164 1.7E-23 T 12-10-2018 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Gene3D G3DSA:2.30.120.10 269 341 1.0E-186 T 12-10-2018 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 PIRSF PIRSF001227 1 743 7.6E-94 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 SUPERFAMILY SSF56235 1 742 5.92E-161 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Gene3D G3DSA:1.10.1400.10 484 643 1.0E-186 T 12-10-2018 ABD1_18740 1e2db33456fc9fea883046ebe19252e9 743 Gene3D G3DSA:3.60.20.10 203 722 1.0E-186 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 Gene3D G3DSA:1.10.10.10 75 159 5.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 SUPERFAMILY SSF46767 77 158 5.36E-30 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 SUPERFAMILY SSF53155 4 83 9.02E-18 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 4.6E-13 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 Gene3D G3DSA:3.30.160.70 2 74 1.7E-17 T 12-10-2018 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 42.981 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 1.4E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABD1_06600 fd12004d5d2cedf5736c3b9b7827250d 159 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 6.5E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABD1_27750 b36f2c0f39116543c59497f03e133f5a 188 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 187 6.8E-50 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_27750 b36f2c0f39116543c59497f03e133f5a 188 SUPERFAMILY SSF50486 4 188 1.33E-57 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ABD1_27750 b36f2c0f39116543c59497f03e133f5a 188 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 9 184 2.4E-52 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_27750 b36f2c0f39116543c59497f03e133f5a 188 Gene3D G3DSA:3.10.300.10 1 188 3.4E-57 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_27750 b36f2c0f39116543c59497f03e133f5a 188 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 7 187 27.335 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 Pfam PF01084 Ribosomal protein S18 19 68 1.3E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.834 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 SUPERFAMILY SSF46911 3 74 1.57E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 9.1E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 9.1E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 9.1E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 9.1E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.6E-35 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 Gene3D G3DSA:4.10.640.10 1 75 7.4E-27 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_21710 574f8a5447230ac47484967c0f9aa34a 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 8.0E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_19740 b77f1a83679c75308ff36d75ba662f90 480 TIGRFAM TIGR03606 non_repeat_PQQ: dehydrogenase, PQQ-dependent, s-GDH family 23 480 3.7E-239 T 12-10-2018 IPR019893 PQQ-dependent dehydrogenase, s-GDH family KEGG: 00030+1.1.5.2|MetaCyc: PWY-7165 ABD1_19740 b77f1a83679c75308ff36d75ba662f90 480 Gene3D G3DSA:2.120.10.30 26 480 1.2E-189 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABD1_19740 b77f1a83679c75308ff36d75ba662f90 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 369 453 5.6E-10 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ABD1_19740 b77f1a83679c75308ff36d75ba662f90 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 309 1.5E-54 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ABD1_19740 b77f1a83679c75308ff36d75ba662f90 480 SUPERFAMILY SSF50952 34 456 1.83E-56 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ABD1_08830 e8320fc9f45456c58e2f270ed79825b7 688 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 64 511 5.7E-171 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_08830 e8320fc9f45456c58e2f270ed79825b7 688 ProSitePatterns PS01303 BCCT family of transporters signature. 327 336 - T 12-10-2018 IPR018093 BCCT transporter, conserved site ABD1_08830 e8320fc9f45456c58e2f270ed79825b7 688 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 26 511 8.3E-177 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ABD1_28920 b72951800fcc5dd72c9554704c267764 142 PIRSF PIRSF005276 5 142 6.8E-54 T 12-10-2018 IPR007481 Stringent starvation protein B ABD1_28920 b72951800fcc5dd72c9554704c267764 142 SUPERFAMILY SSF101738 7 116 9.03E-49 T 12-10-2018 IPR036760 SspB-like superfamily ABD1_28920 b72951800fcc5dd72c9554704c267764 142 Gene3D G3DSA:2.30.30.220 4 133 5.7E-53 T 12-10-2018 IPR036760 SspB-like superfamily ABD1_28920 b72951800fcc5dd72c9554704c267764 142 Pfam PF04386 Stringent starvation protein B 11 133 5.3E-37 T 12-10-2018 IPR007481 Stringent starvation protein B ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 Gene3D G3DSA:3.30.70.580 1 44 2.7E-10 T 12-10-2018 ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 12 158 4.4E-43 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 SUPERFAMILY SSF55120 8 167 4.32E-30 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 16 30 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 Gene3D G3DSA:3.30.70.1560 45 145 2.6E-39 T 12-10-2018 ABD1_24660 0eb69fac7f2f0a9350eea6442dab9f77 240 Pfam PF00849 RNA pseudouridylate synthase 11 125 3.4E-8 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_03580 92834f81da93d563ca32d17bb8477e9e 136 SUPERFAMILY SSF51316 4 136 2.2E-44 T 12-10-2018 IPR011057 Mss4-like superfamily ABD1_03580 92834f81da93d563ca32d17bb8477e9e 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 117 5.4E-23 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ABD1_03580 92834f81da93d563ca32d17bb8477e9e 136 Gene3D G3DSA:2.170.150.70 8 121 1.6E-17 T 12-10-2018 ABD1_29530 08f4885e201b1c8b060ee623838fd856 101 SUPERFAMILY SSF57716 2 101 9.27E-39 T 12-10-2018 ABD1_29530 08f4885e201b1c8b060ee623838fd856 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.764 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid ABD1_29530 08f4885e201b1c8b060ee623838fd856 101 Gene3D G3DSA:4.10.830.10 41 101 7.9E-22 T 12-10-2018 ABD1_29530 08f4885e201b1c8b060ee623838fd856 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.4E-25 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_29530 08f4885e201b1c8b060ee623838fd856 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_01070 55d0fb53b4a099c59447849934ce66c0 257 SUPERFAMILY SSF52096 1 256 1.9E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_01070 55d0fb53b4a099c59447849934ce66c0 257 Gene3D G3DSA:3.90.226.10 2 198 2.8E-75 T 12-10-2018 ABD1_01070 55d0fb53b4a099c59447849934ce66c0 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABD1_01070 55d0fb53b4a099c59447849934ce66c0 257 Gene3D G3DSA:1.10.12.10 200 256 8.7E-25 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_01070 55d0fb53b4a099c59447849934ce66c0 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 2.2E-84 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_24670 443049ff2860f8261f5280b9c4cb8787 745 PIRSF PIRSF009407 1 744 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABD1_24670 443049ff2860f8261f5280b9c4cb8787 745 SUPERFAMILY SSF53659 5 742 0.0 T 12-10-2018 ABD1_24670 443049ff2860f8261f5280b9c4cb8787 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABD1_24670 443049ff2860f8261f5280b9c4cb8787 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABD1_24670 443049ff2860f8261f5280b9c4cb8787 745 Gene3D G3DSA:3.40.718.10 404 663 3.0E-7 T 12-10-2018 ABD1_14460 6e7869f88b2ff35e968cfd881b3e4483 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 210 7.0E-14 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_14460 6e7869f88b2ff35e968cfd881b3e4483 244 Gene3D G3DSA:3.40.50.12500 1 243 2.9E-82 T 12-10-2018 ABD1_28420 3a43f77fc2e1f91c808552465b2f4b7e 297 SUPERFAMILY SSF75005 56 228 7.28E-15 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABD1_23690 5061de2cf4299033d389565899f93536 251 PRINTS PR01399 Enterobactin synthetase component D signature 96 114 1.6E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 ABD1_23690 5061de2cf4299033d389565899f93536 251 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 1.6E-8 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 ABD1_23690 5061de2cf4299033d389565899f93536 251 SUPERFAMILY SSF56214 137 250 3.49E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_23690 5061de2cf4299033d389565899f93536 251 Gene3D G3DSA:3.90.470.20 135 250 8.7E-8 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_23690 5061de2cf4299033d389565899f93536 251 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 136 218 1.0E-11 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_14490 298cc668b1a5312913b2390a5f436136 151 Pfam PF03466 LysR substrate binding domain 15 145 2.5E-18 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14490 298cc668b1a5312913b2390a5f436136 151 Gene3D G3DSA:3.40.190.290 6 147 5.7E-33 T 12-10-2018 ABD1_14490 298cc668b1a5312913b2390a5f436136 151 SUPERFAMILY SSF53850 13 147 6.15E-22 T 12-10-2018 ABD1_20070 6c45e775df05b6bc323c9bdf2e5817de 174 Gene3D G3DSA:3.90.190.10 3 155 1.2E-30 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_20070 6c45e775df05b6bc323c9bdf2e5817de 174 SUPERFAMILY SSF52799 9 133 3.74E-15 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like ABD1_13430 65c06240c7f35f6cdf6a9a3c9b73f4be 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 1.2E-228 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABD1_13430 65c06240c7f35f6cdf6a9a3c9b73f4be 459 Pfam PF03315 Serine dehydratase beta chain 4 155 9.0E-58 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABD1_13430 65c06240c7f35f6cdf6a9a3c9b73f4be 459 Gene3D G3DSA:3.30.1330.90 11 160 1.2E-53 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABD1_13430 65c06240c7f35f6cdf6a9a3c9b73f4be 459 Pfam PF03313 Serine dehydratase alpha chain 187 453 1.9E-105 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit ABD1_13430 65c06240c7f35f6cdf6a9a3c9b73f4be 459 SUPERFAMILY SSF143548 17 156 1.33E-46 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABD1_22900 3b52868fd94b739af4522a8a9918de41 422 Pfam PF13194 Domain of unknown function (DUF4010) 186 392 1.9E-27 T 12-10-2018 IPR025105 Domain of unknown function DUF4010 ABD1_22900 3b52868fd94b739af4522a8a9918de41 422 Pfam PF02308 MgtC family 22 136 3.0E-15 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_27650 b111ba700084b9e77f734a4e2e4c78ab 113 Gene3D G3DSA:2.30.29.80 1 113 5.1E-49 T 12-10-2018 ABD1_27650 b111ba700084b9e77f734a4e2e4c78ab 113 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.0E-21 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 ABD1_27650 b111ba700084b9e77f734a4e2e4c78ab 113 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 9.9E-22 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 ABD1_27650 b111ba700084b9e77f734a4e2e4c78ab 113 SUPERFAMILY SSF160113 61 109 1.05E-16 T 12-10-2018 IPR036913 YegP-like superfamily ABD1_27650 b111ba700084b9e77f734a4e2e4c78ab 113 SUPERFAMILY SSF160113 1 57 2.75E-19 T 12-10-2018 IPR036913 YegP-like superfamily ABD1_00240 3d44517cccfa0c37b77184a5f9a94cfb 266 Pfam PF00005 ABC transporter 47 183 3.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_00240 3d44517cccfa0c37b77184a5f9a94cfb 266 SUPERFAMILY SSF52540 32 253 2.61E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_00240 3d44517cccfa0c37b77184a5f9a94cfb 266 Gene3D G3DSA:3.40.50.300 32 262 2.8E-64 T 12-10-2018 ABD1_00240 3d44517cccfa0c37b77184a5f9a94cfb 266 SMART SM00382 56 233 1.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 43 124 9.3E-5 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 SUPERFAMILY SSF56322 49 449 1.44E-109 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 PRINTS PR00095 Anthranilate synthase component I signature 383 397 2.3E-8 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.3E-8 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.3E-8 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 Pfam PF00425 chorismate binding enzyme 187 441 2.7E-90 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABD1_06370 9a1df03c539b79f1225bc2554136e34f 454 Gene3D G3DSA:3.60.120.10 13 451 1.5E-124 T 12-10-2018 IPR005801 ADC synthase GO:0009058 ABD1_00620 e74f60209e7b47bf1e8f3a4f1a0f4362 311 SUPERFAMILY SSF51735 1 310 3.4E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00620 e74f60209e7b47bf1e8f3a4f1a0f4362 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 6.1E-31 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_00620 e74f60209e7b47bf1e8f3a4f1a0f4362 311 Gene3D G3DSA:3.40.50.720 1 310 5.5E-57 T 12-10-2018 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 PIRSF PIRSF000521 27 123 0.0017 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 PIRSF PIRSF000521 160 401 1.3E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 PIRSF PIRSF000521 123 159 0.53 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 SUPERFAMILY SSF53383 14 399 1.25E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 Gene3D G3DSA:3.40.640.10 58 303 4.4E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 402 1.3E-219 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 Pfam PF00202 Aminotransferase class-III 24 398 4.0E-120 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 69.315 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 Gene3D G3DSA:3.90.1150.10 24 391 4.4E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_11040 ecc7a406103b514d3e8751f160e12ee6 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 398 1.4E-152 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABD1_28460 d7f52337e03aba7900f67956380fa66a 337 Pfam PF13524 Glycosyl transferases group 1 224 316 3.8E-12 T 12-10-2018 ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 394 2.4E-59 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 Gene3D G3DSA:3.40.50.1100 116 238 1.1E-197 T 12-10-2018 ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 4.7E-222 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 SUPERFAMILY SSF53686 92 440 4.94E-57 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 444 261.413 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ABD1_09270 d94cf4004fbd1a0da14d20fa4b44a798 444 Gene3D G3DSA:3.40.50.1100 24 438 1.1E-197 T 12-10-2018 ABD1_25310 d9b5d792f4be6c683c4b41651453d7a9 189 Gene3D G3DSA:3.40.33.10 15 187 1.2E-39 T 12-10-2018 IPR035940 CAP superfamily ABD1_25310 d9b5d792f4be6c683c4b41651453d7a9 189 Pfam PF00188 Cysteine-rich secretory protein family 59 186 1.4E-15 T 12-10-2018 IPR014044 CAP domain ABD1_25310 d9b5d792f4be6c683c4b41651453d7a9 189 SUPERFAMILY SSF55797 51 187 3.53E-18 T 12-10-2018 IPR035940 CAP superfamily ABD1_21660 26078a85733bafa2932225147c1739db 663 SUPERFAMILY SSF81442 45 559 3.92E-176 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 1.3E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 3.1E-137 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 5 649 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 ABD1_21660 26078a85733bafa2932225147c1739db 663 Gene3D G3DSA:1.20.210.10 31 561 5.4E-187 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21660 26078a85733bafa2932225147c1739db 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_14130 24dbaf50f3ae721618583718926e9332 286 Gene3D G3DSA:3.40.30.10 17 251 6.4E-110 T 12-10-2018 ABD1_14130 24dbaf50f3ae721618583718926e9332 286 SUPERFAMILY SSF52833 32 126 1.02E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_14130 24dbaf50f3ae721618583718926e9332 286 Pfam PF00043 Glutathione S-transferase, C-terminal domain 178 246 1.2E-11 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_14130 24dbaf50f3ae721618583718926e9332 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 42 123 5.9E-7 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_14130 24dbaf50f3ae721618583718926e9332 286 Gene3D G3DSA:1.20.1050.10 129 245 6.4E-110 T 12-10-2018 ABD1_14130 24dbaf50f3ae721618583718926e9332 286 SUPERFAMILY SSF47616 113 255 2.09E-35 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_33320 9dc94c69d073c05fd9ba2a9026166a5a 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.1E-10 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ABD1_33320 9dc94c69d073c05fd9ba2a9026166a5a 52 PIRSF PIRSF036466 1 52 4.7E-19 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ABD1_33320 9dc94c69d073c05fd9ba2a9026166a5a 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 17.701 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ABD1_18000 d92f8ac61156cc35cb6a9cda3087a646 255 SUPERFAMILY SSF55811 17 159 5.69E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_18000 d92f8ac61156cc35cb6a9cda3087a646 255 SUPERFAMILY SSF46785 164 234 5.17E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18000 d92f8ac61156cc35cb6a9cda3087a646 255 Pfam PF00293 NUDIX domain 25 148 2.6E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_18000 d92f8ac61156cc35cb6a9cda3087a646 255 Gene3D G3DSA:1.10.10.10 165 239 1.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18000 d92f8ac61156cc35cb6a9cda3087a646 255 Gene3D G3DSA:3.90.79.10 21 164 3.9E-34 T 12-10-2018 ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 SUPERFAMILY SSF52833 1 86 6.3E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 Gene3D G3DSA:1.20.1050.10 81 196 9.7E-41 T 12-10-2018 ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 1.7E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 SUPERFAMILY SSF47616 72 198 3.55E-29 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 189 1.6E-12 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_33650 25a616d4dea33d423c9011f0080a1dda 199 Gene3D G3DSA:3.40.30.10 1 78 3.0E-24 T 12-10-2018 ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 PIRSF PIRSF006232 6 290 1.5E-83 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 Gene3D G3DSA:2.60.120.10 17 279 1.5E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 Pfam PF05726 Pirin C-terminal cupin domain 183 284 8.4E-28 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 SUPERFAMILY SSF51182 2 287 1.03E-77 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 Gene3D G3DSA:2.60.120.10 149 253 1.5E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_31720 da5b12acaf3737541a8f38a1143e84fc 290 Pfam PF02678 Pirin 22 127 2.0E-31 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABD1_29650 766187e2e2e374bc137dc7676879ab35 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.569 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29650 766187e2e2e374bc137dc7676879ab35 200 SUPERFAMILY SSF52166 7 196 1.96E-68 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29650 766187e2e2e374bc137dc7676879ab35 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 2.1E-71 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29650 766187e2e2e374bc137dc7676879ab35 200 Gene3D G3DSA:3.40.1370.10 3 199 3.0E-65 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_29650 766187e2e2e374bc137dc7676879ab35 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 1.9E-61 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 Pfam PF00344 SecY translocase 83 425 5.8E-113 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 Hamap MF_01465 Protein translocase subunit SecY [secY]. 17 441 28.367 T 12-10-2018 IPR026593 Protein translocase subunit SecY ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 SUPERFAMILY SSF103491 11 432 5.49E-127 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 28 437 3.1E-125 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 ProSitePatterns PS00755 Protein secY signature 1. 83 102 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 Gene3D G3DSA:1.10.3370.10 14 437 1.1E-157 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 275 294 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 323 345 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 410 428 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 378 396 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 82 102 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 123 146 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 30 48 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 3.2E-92 T 12-10-2018 ABD1_29460 ec5aaf002ac465d42409f41002817ca0 452 PIRSF PIRSF004557 11 447 8.9E-121 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABD1_32540 e4d3fcf904022c2bf2a2fee2149ba04b 167 Pfam PF04115 Ureidoglycolate lyase 3 165 6.0E-48 T 12-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 ABD1_32540 e4d3fcf904022c2bf2a2fee2149ba04b 167 PIRSF PIRSF017306 3 164 7.5E-41 T 12-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 ABD1_32540 e4d3fcf904022c2bf2a2fee2149ba04b 167 Gene3D G3DSA:2.60.120.480 4 167 4.4E-52 T 12-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 ABD1_32540 e4d3fcf904022c2bf2a2fee2149ba04b 167 SUPERFAMILY SSF51182 6 165 4.89E-51 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_12130 c5b4fede82d9090597e0b361a648dedf 195 Gene3D G3DSA:3.40.50.150 6 195 5.6E-51 T 12-10-2018 ABD1_12130 c5b4fede82d9090597e0b361a648dedf 195 Pfam PF01596 O-methyltransferase 32 161 5.0E-22 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ABD1_12130 c5b4fede82d9090597e0b361a648dedf 195 SUPERFAMILY SSF53335 29 194 9.29E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_31630 22034dfc5e14701a972c688c68fd9606 441 Pfam PF10117 McrBC 5-methylcytosine restriction system component 62 389 5.9E-92 T 12-10-2018 IPR019292 5-methylcytosine restriction system component ABD1_01790 948635c35f7e035651ec91b6eed87824 134 Gene3D G3DSA:1.10.1660.10 1 118 2.4E-23 T 12-10-2018 ABD1_01790 948635c35f7e035651ec91b6eed87824 134 SMART SM00422 1 69 2.9E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_01790 948635c35f7e035651ec91b6eed87824 134 SUPERFAMILY SSF46955 1 120 4.03E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_01790 948635c35f7e035651ec91b6eed87824 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_01790 948635c35f7e035651ec91b6eed87824 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_01790 948635c35f7e035651ec91b6eed87824 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_01790 948635c35f7e035651ec91b6eed87824 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 2.8E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 SUPERFAMILY SSF50022 14 171 1.03E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 1.4E-48 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 Pfam PF00355 Rieske [2Fe-2S] domain 52 135 2.1E-22 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 15 447 4.8E-274 T 12-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 391 2.4E-19 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 Gene3D G3DSA:3.90.380.10 30 443 2.0E-112 T 12-10-2018 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 SUPERFAMILY SSF55961 171 454 1.81E-69 T 12-10-2018 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 ABD1_12240 720b29f6d7340aea0545d82e0c37f425 460 Gene3D G3DSA:2.102.10.10 52 179 2.0E-112 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_16470 876e8217cd6d7426cf56321fcd0ed954 199 Gene3D G3DSA:3.40.50.1240 4 198 9.8E-45 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_16470 876e8217cd6d7426cf56321fcd0ed954 199 SUPERFAMILY SSF53254 4 191 3.39E-45 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_16470 876e8217cd6d7426cf56321fcd0ed954 199 PIRSF PIRSF000709 3 196 6.6E-11 T 12-10-2018 ABD1_16470 876e8217cd6d7426cf56321fcd0ed954 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 194 2.2E-44 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_16470 876e8217cd6d7426cf56321fcd0ed954 199 SMART SM00855 5 160 3.5E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_05110 b97876c3d5b15986e2d75117f1f86e87 111 Pfam PF13511 Domain of unknown function (DUF4124) 18 64 3.4E-7 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 ABD1_15880 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Gene3D G3DSA:3.40.50.300 25 200 5.1E-22 T 12-10-2018 ABD1_15880 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Hamap MF_01919 Cell division protein ZapE [zapE]. 15 373 50.987 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 ABD1_15880 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Pfam PF03969 AFG1-like ATPase 16 368 3.5E-129 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ABD1_15880 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 SUPERFAMILY SSF52540 58 198 9.06E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_13760 73a3817f4cf1ee751bd046d0442c9897 223 Gene3D G3DSA:3.40.50.150 5 223 3.9E-40 T 12-10-2018 ABD1_13760 73a3817f4cf1ee751bd046d0442c9897 223 Pfam PF13649 Methyltransferase domain 46 141 5.3E-15 T 12-10-2018 ABD1_13760 73a3817f4cf1ee751bd046d0442c9897 223 SUPERFAMILY SSF53335 9 222 2.32E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_04930 edfff32dfd43462d9804edd26c45c5b2 141 Gene3D G3DSA:3.10.129.10 4 133 5.1E-17 T 12-10-2018 ABD1_04930 edfff32dfd43462d9804edd26c45c5b2 141 SUPERFAMILY SSF54637 6 133 1.81E-21 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_04930 edfff32dfd43462d9804edd26c45c5b2 141 PIRSF PIRSF020565 2 140 3.2E-37 T 12-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted ABD1_24010 2f110d470ef555e921c363c0cad95bf0 276 Pfam PF10118 Predicted metal-dependent hydrolase 16 262 5.5E-67 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_24010 2f110d470ef555e921c363c0cad95bf0 276 PIRSF PIRSF007580 5 276 1.4E-64 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_18550 5b83e0f9fb9c76c087dd1effb488a47b 268 SUPERFAMILY SSF52317 40 264 2.26E-66 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_18550 5b83e0f9fb9c76c087dd1effb488a47b 268 Gene3D G3DSA:3.40.50.880 14 267 4.5E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_18550 5b83e0f9fb9c76c087dd1effb488a47b 268 Pfam PF01965 DJ-1/PfpI family 64 262 1.5E-10 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABD1_22030 9a62a45b0f1c7e3468371cdf3e9d1159 296 SUPERFAMILY SSF103481 42 143 7.72E-14 T 12-10-2018 ABD1_22030 9a62a45b0f1c7e3468371cdf3e9d1159 296 Pfam PF00892 EamA-like transporter family 12 142 9.2E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_22030 9a62a45b0f1c7e3468371cdf3e9d1159 296 Pfam PF00892 EamA-like transporter family 156 284 3.6E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_22030 9a62a45b0f1c7e3468371cdf3e9d1159 296 SUPERFAMILY SSF103481 191 288 9.55E-17 T 12-10-2018 ABD1_19660 787f531fa1c67881d163e453cd3b2270 286 SUPERFAMILY SSF53474 4 270 2.01E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19660 787f531fa1c67881d163e453cd3b2270 286 Pfam PF12146 Serine aminopeptidase, S33 34 248 4.4E-10 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_19660 787f531fa1c67881d163e453cd3b2270 286 PIRSF PIRSF037442 1 285 6.0E-74 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 ABD1_19660 787f531fa1c67881d163e453cd3b2270 286 Gene3D G3DSA:3.40.50.1820 3 282 1.3E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_03180 64c2b4c056f316437289f56dd852e17c 460 Pfam PF13476 AAA domain 5 264 4.8E-13 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABD1_03180 64c2b4c056f316437289f56dd852e17c 460 SUPERFAMILY SSF52540 1 384 1.11E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_03180 64c2b4c056f316437289f56dd852e17c 460 Gene3D G3DSA:3.40.50.300 1 384 1.7E-20 T 12-10-2018 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 SUPERFAMILY SSF63737 32 229 1.57E-42 T 12-10-2018 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 Gene3D G3DSA:1.10.390.60 241 506 3.3E-81 T 12-10-2018 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 164 179 1.8E-23 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 307 1.8E-23 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 212 227 1.8E-23 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 332 347 1.8E-23 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 351 363 1.8E-23 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 Pfam PF01433 Peptidase family M1 domain 251 479 5.7E-70 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 Pfam PF11838 ERAP1-like C-terminal domain 562 880 2.6E-39 T 12-10-2018 IPR024571 ERAP1-like C-terminal domain ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 SUPERFAMILY SSF55486 246 491 5.86E-72 T 12-10-2018 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 Gene3D G3DSA:2.60.40.1730 27 229 7.1E-48 T 12-10-2018 ABD1_23530 899f5beee2aec23f5457962bac472d7a 899 Gene3D G3DSA:1.25.50.20 603 898 2.2E-20 T 12-10-2018 ABD1_23030 3adabf18cf509873d7746991b444047c 405 Gene3D G3DSA:2.40.30.170 57 304 2.0E-101 T 12-10-2018 ABD1_23030 3adabf18cf509873d7746991b444047c 405 SUPERFAMILY SSF111369 59 299 3.4E-69 T 12-10-2018 ABD1_23030 3adabf18cf509873d7746991b444047c 405 Gene3D G3DSA:2.40.420.20 305 373 2.0E-101 T 12-10-2018 ABD1_23030 3adabf18cf509873d7746991b444047c 405 Gene3D G3DSA:1.10.287.470 105 178 2.0E-101 T 12-10-2018 ABD1_23030 3adabf18cf509873d7746991b444047c 405 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 294 4.3E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_23030 3adabf18cf509873d7746991b444047c 405 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 375 3.0E-87 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_23030 3adabf18cf509873d7746991b444047c 405 Gene3D G3DSA:2.40.50.100 70 215 2.0E-101 T 12-10-2018 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 PIRSF PIRSF000077 2 108 5.0E-39 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.0E-36 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 SUPERFAMILY SSF52833 4 107 9.31E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 Gene3D G3DSA:3.40.30.10 1 108 1.2E-34 T 12-10-2018 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.4E-7 T 12-10-2018 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.4E-7 T 12-10-2018 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.4E-7 T 12-10-2018 ABD1_06120 f14d9a08ecb9a09b588a1bacdb805a17 108 Pfam PF00085 Thioredoxin 5 106 2.1E-34 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABD1_07380 60bb4dd03ee364a8b6d58f751729231a 186 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 174 2.6E-29 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 ABD1_21890 3a261689384201d931542d7e1e434f33 231 SUPERFAMILY SSF161098 25 221 4.06E-42 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_21890 3a261689384201d931542d7e1e434f33 231 Gene3D G3DSA:1.10.3720.10 21 230 2.2E-44 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_21890 3a261689384201d931542d7e1e434f33 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 228 7.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_22520 3eeb735ab6ea37c777d84da5095aa2bf 151 Gene3D G3DSA:3.40.50.1240 1 145 8.1E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_22520 3eeb735ab6ea37c777d84da5095aa2bf 151 SMART SM00855 2 111 2.6E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_22520 3eeb735ab6ea37c777d84da5095aa2bf 151 SUPERFAMILY SSF53254 1 121 1.14E-20 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_22520 3eeb735ab6ea37c777d84da5095aa2bf 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 76 5.9E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 Gene3D G3DSA:1.10.10.10 2 91 4.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 SUPERFAMILY SSF46785 1 81 5.11E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 Pfam PF03466 LysR substrate binding domain 87 294 6.4E-41 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 SUPERFAMILY SSF53850 89 298 5.07E-35 T 12-10-2018 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 Gene3D G3DSA:3.40.190.10 165 271 1.6E-58 T 12-10-2018 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_14560 47a84602ef090e2747fbc6dc64d8d914 300 Gene3D G3DSA:3.40.190.10 92 290 1.6E-58 T 12-10-2018 ABD1_13150 8e2457509835f75cea7c5f37ad11dfeb 133 PIRSF PIRSF029394 2 131 4.3E-24 T 12-10-2018 IPR016918 Uncharacterised conserved protein UCP029394 ABD1_13150 8e2457509835f75cea7c5f37ad11dfeb 133 SUPERFAMILY SSF54427 10 129 1.49E-24 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_13150 8e2457509835f75cea7c5f37ad11dfeb 133 Gene3D G3DSA:3.10.450.50 5 129 2.7E-34 T 12-10-2018 ABD1_01720 8fc4c64494b94ef396081891f5cc74d9 404 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 122 351 1.5E-32 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 ABD1_01970 9298ebf46dabdb88b3645d3267852ad7 435 Gene3D G3DSA:2.40.160.10 12 435 5.7E-139 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_01970 9298ebf46dabdb88b3645d3267852ad7 435 Pfam PF03573 outer membrane porin, OprD family 30 433 1.6E-107 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 Pfam PF02567 Phenazine biosynthesis-like protein 7 288 2.2E-69 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 PIRSF PIRSF016184 1 292 1.1E-80 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 Gene3D G3DSA:3.10.310.10 123 284 3.0E-88 T 12-10-2018 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 Gene3D G3DSA:3.10.310.10 5 286 3.0E-88 T 12-10-2018 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 SUPERFAMILY SSF54506 3 289 3.14E-61 T 12-10-2018 ABD1_06940 ff5cadcaf85a0c71ef74877652b0b603 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 288 1.7E-81 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 Gene3D G3DSA:3.40.50.720 4 293 8.2E-77 T 12-10-2018 ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 SUPERFAMILY SSF51735 14 259 2.66E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 7.0E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_24040 1ac27851db43658bb01976e5ec5b471f 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 256 3.6E-56 T 12-10-2018 ABD1_03310 987c60310dd6cec5077ef30adf9474ba 432 SUPERFAMILY SSF56601 35 387 1.81E-68 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_03310 987c60310dd6cec5077ef30adf9474ba 432 Gene3D G3DSA:3.40.710.30 33 408 6.3E-75 T 12-10-2018 ABD1_03310 987c60310dd6cec5077ef30adf9474ba 432 Pfam PF00144 Beta-lactamase 50 390 6.1E-54 T 12-10-2018 IPR001466 Beta-lactamase-related ABD1_16060 f8b46884cad593fc0a8ed4a271b5a2e1 221 Gene3D G3DSA:3.40.50.720 1 220 2.2E-49 T 12-10-2018 ABD1_16060 f8b46884cad593fc0a8ed4a271b5a2e1 221 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 80 5.0E-7 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABD1_16060 f8b46884cad593fc0a8ed4a271b5a2e1 221 SUPERFAMILY SSF51735 2 207 7.4E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_12300 77866fa4b02f2b75a03a2f1e1797accd 118 Gene3D G3DSA:1.20.1270.360 12 118 6.6E-26 T 12-10-2018 ABD1_12300 77866fa4b02f2b75a03a2f1e1797accd 118 Pfam PF03860 Domain of Unknown Function (DUF326) 96 115 2.1E-5 T 12-10-2018 IPR005560 Protein of unknown function DUF326 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 Gene3D G3DSA:3.30.572.10 1 280 4.8E-132 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 Pfam PF00303 Thymidylate synthase 3 280 4.8E-118 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 280 1.7E-139 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 SUPERFAMILY SSF55831 1 280 1.57E-129 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 3.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 3.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 3.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 3.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.644 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_04290 8922a346268e2a653bea7920e91745a3 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABD1_20050 1772fb20f164e7e867c5752709f9ddda 181 SUPERFAMILY SSF48498 60 178 1.62E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_20050 1772fb20f164e7e867c5752709f9ddda 181 SUPERFAMILY SSF46689 2 56 1.59E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_20050 1772fb20f164e7e867c5752709f9ddda 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 38 2.8E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20050 1772fb20f164e7e867c5752709f9ddda 181 Gene3D G3DSA:1.10.10.60 1 38 6.2E-16 T 12-10-2018 ABD1_20050 1772fb20f164e7e867c5752709f9ddda 181 Gene3D G3DSA:1.10.357.10 53 181 1.6E-15 T 12-10-2018 ABD1_26020 e93625efd44b211e57f56938bbe4ba8e 44 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 2 44 3.8E-17 T 12-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair ABD1_15180 28aca739d085b7105f19836d424b95db 486 Gene3D G3DSA:3.40.50.10260 2 210 2.4E-48 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ABD1_15180 28aca739d085b7105f19836d424b95db 486 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 201 2.8E-33 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ABD1_15180 28aca739d085b7105f19836d424b95db 486 SUPERFAMILY SSF53613 220 485 1.17E-59 T 12-10-2018 IPR029056 Ribokinase-like ABD1_15180 28aca739d085b7105f19836d424b95db 486 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 222 486 6.1E-58 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABD1_15180 28aca739d085b7105f19836d424b95db 486 Pfam PF01256 Carbohydrate kinase 238 481 1.3E-48 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABD1_15180 28aca739d085b7105f19836d424b95db 486 SUPERFAMILY SSF64153 5 237 1.57E-50 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ABD1_15180 28aca739d085b7105f19836d424b95db 486 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 215 485 19.148 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABD1_15180 28aca739d085b7105f19836d424b95db 486 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 426 436 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site ABD1_15180 28aca739d085b7105f19836d424b95db 486 Gene3D G3DSA:3.40.1190.20 220 486 5.0E-70 T 12-10-2018 IPR029056 Ribokinase-like ABD1_15180 28aca739d085b7105f19836d424b95db 486 Pfam PF03853 YjeF-related protein N-terminus 27 185 1.7E-32 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ABD1_15180 28aca739d085b7105f19836d424b95db 486 PIRSF PIRSF017184 3 486 2.2E-103 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 ABD1_09230 11db2b6a766780d3fb316e4a79992206 283 Gene3D G3DSA:3.40.50.970 6 281 1.0E-84 T 12-10-2018 ABD1_09230 11db2b6a766780d3fb316e4a79992206 283 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 21 270 6.6E-38 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABD1_09230 11db2b6a766780d3fb316e4a79992206 283 SUPERFAMILY SSF52518 11 277 2.59E-75 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold ABD1_23830 e44443cca49601001463a8935d357056 313 Gene3D G3DSA:1.10.3470.10 1 313 2.2E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_23830 e44443cca49601001463a8935d357056 313 Pfam PF01032 FecCD transport family 9 310 3.1E-63 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABD1_23830 e44443cca49601001463a8935d357056 313 SUPERFAMILY SSF81345 4 310 2.09E-64 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_24710 00318c4a9815df69bc3da8dc64cf1b4f 160 Gene3D G3DSA:3.10.50.40 4 154 1.0E-57 T 12-10-2018 ABD1_24710 00318c4a9815df69bc3da8dc64cf1b4f 160 SUPERFAMILY SSF54534 4 140 9.62E-39 T 12-10-2018 ABD1_24710 00318c4a9815df69bc3da8dc64cf1b4f 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 4.3E-15 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABD1_24710 00318c4a9815df69bc3da8dc64cf1b4f 160 Gene3D G3DSA:2.40.10.330 71 121 1.0E-57 T 12-10-2018 ABD1_08760 6514cbfc13502f7c03bf802809737a7d 292 SUPERFAMILY SSF82282 2 291 1.83E-75 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABD1_08760 6514cbfc13502f7c03bf802809737a7d 292 PIRSF PIRSF037505 1 291 1.1E-8 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 ABD1_08760 6514cbfc13502f7c03bf802809737a7d 292 Pfam PF02574 Homocysteine S-methyltransferase 3 288 7.6E-56 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ABD1_08760 6514cbfc13502f7c03bf802809737a7d 292 Gene3D G3DSA:3.20.20.330 1 292 1.3E-67 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 1.2E-36 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 Pfam PF01909 Nucleotidyltransferase domain 66 111 2.2E-5 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 SUPERFAMILY SSF81301 37 166 1.69E-16 T 12-10-2018 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 SUPERFAMILY SSF109604 425 548 3.56E-13 T 12-10-2018 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 PIRSF PIRSF006288 10 884 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 SUPERFAMILY SSF55021 809 861 3.58E-9 T 12-10-2018 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 Gene3D G3DSA:1.10.3210.10 444 584 8.7E-10 T 12-10-2018 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 Pfam PF01966 HD domain 492 586 2.7E-8 T 12-10-2018 IPR006674 HD domain ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 31 877 1.5E-266 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 SMART SM00471 453 600 2.0E-5 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 SUPERFAMILY SSF81593 190 312 6.28E-9 T 12-10-2018 ABD1_14720 4693f4385b9a77ebeb46434589da2967 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 286.665 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABD1_23560 4af8e99bc8577d6552d318b63f7e7464 268 Gene3D G3DSA:3.20.20.70 2 267 3.3E-98 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_23560 4af8e99bc8577d6552d318b63f7e7464 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 35.514 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABD1_23560 4af8e99bc8577d6552d318b63f7e7464 268 SUPERFAMILY SSF51366 16 263 1.53E-86 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_23560 4af8e99bc8577d6552d318b63f7e7464 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ABD1_23560 4af8e99bc8577d6552d318b63f7e7464 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 261 3.2E-99 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABD1_11520 90b772eb8d60db4bcc57708290bf38e9 104 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 19 99 2.5E-18 T 12-10-2018 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family ABD1_14710 6b6d58cb4413a2d0b57fc50d7dac6235 389 Gene3D G3DSA:3.40.640.10 42 287 7.9E-123 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_14710 6b6d58cb4413a2d0b57fc50d7dac6235 389 Pfam PF00155 Aminotransferase class I and II 30 385 1.8E-51 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_14710 6b6d58cb4413a2d0b57fc50d7dac6235 389 SUPERFAMILY SSF53383 2 389 1.32E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_14710 6b6d58cb4413a2d0b57fc50d7dac6235 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 2.7E-201 T 12-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 ABD1_14710 6b6d58cb4413a2d0b57fc50d7dac6235 389 Gene3D G3DSA:3.90.1150.10 13 380 7.9E-123 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_23630 ebd15a27982e6ea54f91e071f3a4d425 630 Pfam PF13387 Domain of unknown function (DUF4105) 125 294 1.8E-55 T 12-10-2018 IPR025178 Domain of unknown function DUF4105 ABD1_17520 5de22ec83e74c6fc01d55f6e22d5937e 303 Gene3D G3DSA:3.60.15.10 1 303 1.4E-94 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_17520 5de22ec83e74c6fc01d55f6e22d5937e 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 159.056 T 12-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B ABD1_17520 5de22ec83e74c6fc01d55f6e22d5937e 303 Pfam PF12706 Beta-lactamase superfamily domain 51 270 1.5E-45 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_17520 5de22ec83e74c6fc01d55f6e22d5937e 303 SUPERFAMILY SSF56281 1 303 3.58E-63 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_17520 5de22ec83e74c6fc01d55f6e22d5937e 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 303 1.5E-146 T 12-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 Gene3D G3DSA:1.10.3080.10 14 403 5.2E-52 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 Pfam PF00654 Voltage gated chloride channel 62 394 4.0E-58 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 PRINTS PR00762 Chloride channel signature 317 337 1.3E-9 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 PRINTS PR00762 Chloride channel signature 153 172 1.3E-9 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 PRINTS PR00762 Chloride channel signature 345 361 1.3E-9 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 PRINTS PR00762 Chloride channel signature 102 121 1.3E-9 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ABD1_12960 7bea432c9bc4d4c527b9c22b571914c2 406 SUPERFAMILY SSF81340 8 400 4.71E-74 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 ABD1_03620 2235569c3e9520f3b1b76a4c827380e1 432 SUPERFAMILY SSF56112 93 305 9.21E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_03620 2235569c3e9520f3b1b76a4c827380e1 432 Pfam PF03109 ABC1 family 111 228 3.2E-32 T 12-10-2018 IPR004147 UbiB domain ABD1_24440 adb67bd691ffd4798b227f5771693ebd 190 SUPERFAMILY SSF52218 1 179 6.81E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_24440 adb67bd691ffd4798b227f5771693ebd 190 Pfam PF02525 Flavodoxin-like fold 3 168 1.9E-34 T 12-10-2018 IPR003680 Flavodoxin-like fold ABD1_24440 adb67bd691ffd4798b227f5771693ebd 190 Gene3D G3DSA:3.40.50.360 3 180 1.2E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_19990 d1f802a74ca304438105c594aa01d946 250 SUPERFAMILY SSF64005 8 232 3.14E-82 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABD1_19990 d1f802a74ca304438105c594aa01d946 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 2.4E-76 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABD1_19990 d1f802a74ca304438105c594aa01d946 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 1.5E-83 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABD1_19990 d1f802a74ca304438105c594aa01d946 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ABD1_19990 d1f802a74ca304438105c594aa01d946 250 Gene3D G3DSA:3.40.1180.10 2 237 8.3E-91 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABD1_19990 d1f802a74ca304438105c594aa01d946 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 37.135 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 1.6E-259 T 12-10-2018 IPR017750 ATPase, type I secretion system ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 Pfam PF00664 ABC transporter transmembrane region 161 426 2.3E-32 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 Pfam PF00005 ABC transporter 495 640 1.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 SUPERFAMILY SSF52540 464 701 1.13E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:3.90.70.10 4 127 2.0E-11 T 12-10-2018 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:1.20.1560.10 145 456 2.6E-63 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 SUPERFAMILY SSF90123 146 456 7.59E-63 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 SMART SM00382 500 686 3.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_12650 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:3.40.50.300 465 712 2.0E-69 T 12-10-2018 ABD1_31850 b8f06714619a08c7d19acea8aa889493 224 Gene3D G3DSA:1.20.910.10 1 221 5.4E-66 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_31850 b8f06714619a08c7d19acea8aa889493 224 Pfam PF03070 TENA/THI-4/PQQC family 16 214 7.5E-37 T 12-10-2018 IPR004305 Thiaminase-2/PQQC ABD1_31850 b8f06714619a08c7d19acea8aa889493 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 15 214 4.2E-47 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 ABD1_31850 b8f06714619a08c7d19acea8aa889493 224 SUPERFAMILY SSF48613 1 213 1.42E-67 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_25210 fae96cacf5afb4d86bbcca24a85600ac 294 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 284 1.5E-127 T 12-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 ABD1_25210 fae96cacf5afb4d86bbcca24a85600ac 294 SUPERFAMILY SSF161098 25 280 2.88E-55 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_25210 fae96cacf5afb4d86bbcca24a85600ac 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 280 3.6E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_25210 fae96cacf5afb4d86bbcca24a85600ac 294 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 23 281 1.9E-98 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABD1_25210 fae96cacf5afb4d86bbcca24a85600ac 294 Gene3D G3DSA:1.10.3720.10 27 285 8.1E-62 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 Gene3D G3DSA:1.10.3130.10 1 66 5.3E-24 T 12-10-2018 ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.2E-75 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 SUPERFAMILY SSF51161 4 169 1.15E-57 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 3.8E-5 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.7E-6 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 1.5E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABD1_14610 bad720915394b9e728fcb3f0b34c5551 271 Gene3D G3DSA:2.160.10.10 67 190 4.1E-38 T 12-10-2018 ABD1_12550 61fa401db088d25c90d29414090f1b11 745 SUPERFAMILY SSF55874 19 185 1.23E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_12550 61fa401db088d25c90d29414090f1b11 745 Gene3D G3DSA:3.30.565.10 13 222 3.6E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_12550 61fa401db088d25c90d29414090f1b11 745 Gene3D G3DSA:3.30.565.10 595 740 8.9E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_12550 61fa401db088d25c90d29414090f1b11 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 646 731 2.0E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABD1_12550 61fa401db088d25c90d29414090f1b11 745 Gene3D G3DSA:1.10.287.130 528 594 8.9E-20 T 12-10-2018 ABD1_12550 61fa401db088d25c90d29414090f1b11 745 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 152 2.0E-21 T 12-10-2018 ABD1_12550 61fa401db088d25c90d29414090f1b11 745 SUPERFAMILY SSF55874 604 740 4.71E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_17510 036b8a2267d80614a55978b2b42bef26 38 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 16 38 11.913 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 ABD1_17510 036b8a2267d80614a55978b2b42bef26 38 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 17 35 4.3E-12 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 ABD1_17510 036b8a2267d80614a55978b2b42bef26 38 Pfam PF08042 PqqA family 16 34 3.0E-11 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 ABD1_14060 0e22fbc52b464da3705c31b5dd2b2e33 212 PIRSF PIRSF006324 5 209 1.2E-45 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_14060 0e22fbc52b464da3705c31b5dd2b2e33 212 Pfam PF01810 LysE type translocator 19 207 1.1E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_11680 45670683226a1f4d2c2c080e85d48b9d 52 Gene3D G3DSA:3.30.920.30 1 51 1.6E-29 T 12-10-2018 IPR038570 HicA superfamily ABD1_11680 45670683226a1f4d2c2c080e85d48b9d 52 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 2 51 1.9E-22 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 ABD1_11680 45670683226a1f4d2c2c080e85d48b9d 52 SUPERFAMILY SSF54786 2 52 5.1E-17 T 12-10-2018 ABD1_18170 4be7ac3138149147c0bccde7b411800e 458 SUPERFAMILY SSF103473 8 436 4.71E-82 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18170 4be7ac3138149147c0bccde7b411800e 458 Gene3D G3DSA:1.20.1250.20 4 442 5.7E-76 T 12-10-2018 ABD1_18170 4be7ac3138149147c0bccde7b411800e 458 Pfam PF07690 Major Facilitator Superfamily 26 400 3.6E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_15850 ee9c7a12a79f012062f86bf3d68304d6 303 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 286 2.0E-54 T 12-10-2018 IPR005642 Lysine exporter LysO ABD1_15850 ee9c7a12a79f012062f86bf3d68304d6 303 Pfam PF03956 Lysine exporter LysO 116 301 2.1E-50 T 12-10-2018 IPR005642 Lysine exporter LysO ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 Pfam PF00571 CBS domain 381 430 4.1E-4 T 12-10-2018 IPR000644 CBS domain ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 Gene3D G3DSA:3.10.580.10 295 443 7.9E-37 T 12-10-2018 ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 SUPERFAMILY SSF54631 300 433 1.0E-18 T 12-10-2018 ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 SMART SM01091 444 524 9.4E-26 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 Pfam PF03471 Transporter associated domain 445 521 6.8E-20 T 12-10-2018 IPR005170 Transporter-associated domain ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 Pfam PF03741 Integral membrane protein TerC family 17 205 1.4E-50 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 Gene3D G3DSA:3.30.465.10 444 525 9.0E-21 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABD1_01880 d94583930bb67da2866cedaa4c4ef269 530 SUPERFAMILY SSF56176 444 521 9.82E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABD1_27150 51db259cdb7ee60addcc78b790fdd343 266 Pfam PF08223 PaaX-like protein C-terminal domain 171 257 1.9E-5 T 12-10-2018 IPR013225 PaaX-like, C-terminal ABD1_27150 51db259cdb7ee60addcc78b790fdd343 266 Gene3D G3DSA:1.10.10.10 4 72 5.4E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_22500 c8b57f41912033b8ae306339b81897b1 159 SUPERFAMILY SSF103054 92 158 3.27E-6 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily ABD1_22500 c8b57f41912033b8ae306339b81897b1 159 Pfam PF04612 Type II secretion system (T2SS), protein M 16 158 6.8E-14 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 ABD1_22620 49a88ed0296c2465540e102e250c1d44 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 254 6.8E-108 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABD1_22620 49a88ed0296c2465540e102e250c1d44 261 Gene3D G3DSA:3.20.20.70 1 259 5.0E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_22620 49a88ed0296c2465540e102e250c1d44 261 Hamap MF_00443 Thiazole synthase [thiG]. 5 260 41.743 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABD1_22620 49a88ed0296c2465540e102e250c1d44 261 SUPERFAMILY SSF110399 5 246 2.62E-88 T 12-10-2018 ABD1_21050 d9683c3f11875566e3691f425aeb889a 271 Gene3D G3DSA:1.10.30.40 1 61 4.8E-13 T 12-10-2018 ABD1_21050 d9683c3f11875566e3691f425aeb889a 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 15 253 3.8E-88 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 ABD1_21050 d9683c3f11875566e3691f425aeb889a 271 Gene3D G3DSA:3.40.50.11240 69 252 6.6E-60 T 12-10-2018 ABD1_21050 d9683c3f11875566e3691f425aeb889a 271 PIRSF PIRSF018982 1 263 2.9E-91 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 ABD1_24810 ad0e3393cbf1eac15b414e161edcad94 348 SUPERFAMILY SSF51412 3 340 4.12E-56 T 12-10-2018 ABD1_24810 ad0e3393cbf1eac15b414e161edcad94 348 Pfam PF03060 Nitronate monooxygenase 5 342 3.4E-68 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABD1_24810 ad0e3393cbf1eac15b414e161edcad94 348 Gene3D G3DSA:3.20.20.70 1 345 8.5E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_29850 c980270dc02a60fe20fec1d2269bc428 95 SUPERFAMILY SSF52091 9 94 4.71E-9 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_29850 c980270dc02a60fe20fec1d2269bc428 95 Pfam PF13466 STAS domain 9 84 5.4E-8 T 12-10-2018 IPR002645 STAS domain ABD1_29850 c980270dc02a60fe20fec1d2269bc428 95 Gene3D G3DSA:3.30.750.24 8 95 1.0E-8 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_12680 41df21b84da752dfbcaf03695082fed7 203 SUPERFAMILY SSF51161 43 201 2.24E-40 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_12680 41df21b84da752dfbcaf03695082fed7 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 105 3.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_12680 41df21b84da752dfbcaf03695082fed7 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABD1_12680 41df21b84da752dfbcaf03695082fed7 203 Gene3D G3DSA:2.160.10.10 38 202 6.7E-46 T 12-10-2018 ABD1_12680 41df21b84da752dfbcaf03695082fed7 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 149 183 3.4E-7 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_06470 8deb0b8b24f48687edc9e989a69246df 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 3.9E-11 T 12-10-2018 IPR001451 Hexapeptide repeat ABD1_06470 8deb0b8b24f48687edc9e989a69246df 176 SUPERFAMILY SSF51161 20 172 9.98E-46 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily ABD1_06470 8deb0b8b24f48687edc9e989a69246df 176 Gene3D G3DSA:2.160.10.10 1 173 6.1E-63 T 12-10-2018 ABD1_05400 47a0671098f7c177db4936fdd30b6061 471 PIRSF PIRSF006060 3 470 9.0E-64 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_05400 47a0671098f7c177db4936fdd30b6061 471 Pfam PF00324 Amino acid permease 28 460 2.6E-96 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_05400 47a0671098f7c177db4936fdd30b6061 471 Gene3D G3DSA:1.20.1740.10 19 470 2.2E-60 T 12-10-2018 ABD1_33940 9a2e1fc56095ecdd71da7b932613d9b1 87 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 6.0E-24 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ABD1_33940 9a2e1fc56095ecdd71da7b932613d9b1 87 Gene3D G3DSA:1.20.58.1000 1 87 5.2E-25 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ABD1_29240 2582d6cb20f043abb4b706b824b48321 213 SUPERFAMILY SSF56529 3 200 4.58E-60 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_29240 2582d6cb20f043abb4b706b824b48321 213 Gene3D G3DSA:3.90.850.10 1 205 8.4E-62 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_29240 2582d6cb20f043abb4b706b824b48321 213 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 200 7.9E-44 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABD1_21110 61f2118c5fc27afe1f2afe74db33d631 285 Pfam PF00892 EamA-like transporter family 2 132 1.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_21110 61f2118c5fc27afe1f2afe74db33d631 285 Pfam PF00892 EamA-like transporter family 148 280 8.9E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_21110 61f2118c5fc27afe1f2afe74db33d631 285 SUPERFAMILY SSF103481 38 135 3.66E-11 T 12-10-2018 ABD1_21110 61f2118c5fc27afe1f2afe74db33d631 285 SUPERFAMILY SSF103481 182 282 2.62E-6 T 12-10-2018 ABD1_00910 7f92d4e8dc8655b75c98943105ee6c8e 221 SUPERFAMILY SSF55120 12 220 4.64E-58 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_00910 7f92d4e8dc8655b75c98943105ee6c8e 221 Gene3D G3DSA:3.30.2350.10 7 220 3.7E-65 T 12-10-2018 ABD1_00910 7f92d4e8dc8655b75c98943105ee6c8e 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 6.0E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_20750 415d91ee2cd4afd619a1ba2d7ce3c6a2 168 Gene3D G3DSA:3.40.630.30 1 166 8.5E-49 T 12-10-2018 ABD1_20750 415d91ee2cd4afd619a1ba2d7ce3c6a2 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 3.2E-15 T 12-10-2018 ABD1_20750 415d91ee2cd4afd619a1ba2d7ce3c6a2 168 SUPERFAMILY SSF55729 3 148 4.12E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 Gene3D G3DSA:3.40.50.720 2 291 5.0E-79 T 12-10-2018 ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 254 3.2E-55 T 12-10-2018 ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 SUPERFAMILY SSF51735 14 255 9.94E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_28980 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_19940 fd93f30420ce2ee473642fbe565fa309 167 Gene3D G3DSA:3.30.910.20 15 167 2.7E-24 T 12-10-2018 IPR024930 Skp domain superfamily ABD1_19940 fd93f30420ce2ee473642fbe565fa309 167 SMART SM00935 10 164 4.1E-32 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 ABD1_19940 fd93f30420ce2ee473642fbe565fa309 167 Pfam PF03938 Outer membrane protein (OmpH-like) 9 162 4.0E-22 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 ABD1_19940 fd93f30420ce2ee473642fbe565fa309 167 SUPERFAMILY SSF111384 22 164 7.19E-24 T 12-10-2018 ABD1_08870 4e37b993019c91637826c8a7e93eb81f 332 SUPERFAMILY SSF52540 10 179 3.38E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08870 4e37b993019c91637826c8a7e93eb81f 332 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 179 2.8E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABD1_08870 4e37b993019c91637826c8a7e93eb81f 332 Gene3D G3DSA:3.40.50.300 6 204 2.5E-47 T 12-10-2018 ABD1_21670 18ca7ee088924c49d656faa65c8e12cc 206 Gene3D G3DSA:1.20.120.80 18 206 1.7E-52 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21670 18ca7ee088924c49d656faa65c8e12cc 206 SUPERFAMILY SSF81452 9 204 3.53E-56 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21670 18ca7ee088924c49d656faa65c8e12cc 206 Pfam PF00510 Cytochrome c oxidase subunit III 12 204 1.9E-14 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABD1_21670 18ca7ee088924c49d656faa65c8e12cc 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 206 5.0E-80 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 ABD1_31830 d70db9007b3c6915e419462c54a00519 453 SUPERFAMILY SSF103473 5 383 9.16E-54 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_31830 d70db9007b3c6915e419462c54a00519 453 Gene3D G3DSA:3.30.70.100 384 446 9.9E-8 T 12-10-2018 ABD1_31830 d70db9007b3c6915e419462c54a00519 453 Gene3D G3DSA:1.20.1250.20 1 383 6.9E-68 T 12-10-2018 ABD1_31830 d70db9007b3c6915e419462c54a00519 453 Pfam PF07690 Major Facilitator Superfamily 14 348 4.0E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_26190 221477591729a3b7b60164a909a921f5 252 Gene3D G3DSA:3.60.21.10 1 246 1.1E-27 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_26190 221477591729a3b7b60164a909a921f5 252 SUPERFAMILY SSF56300 2 232 3.8E-37 T 12-10-2018 ABD1_26190 221477591729a3b7b60164a909a921f5 252 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 1.2E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_21040 16d8f02fee6445ad69cfd8790e8b4f12 461 Gene3D G3DSA:2.30.170.30 1 54 4.8E-22 T 12-10-2018 ABD1_21040 16d8f02fee6445ad69cfd8790e8b4f12 461 PIRSF PIRSF018788 1 459 2.6E-233 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 ABD1_21040 16d8f02fee6445ad69cfd8790e8b4f12 461 Gene3D G3DSA:3.20.20.70 142 450 1.7E-146 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_21040 16d8f02fee6445ad69cfd8790e8b4f12 461 Gene3D G3DSA:1.10.220.70 55 141 8.2E-35 T 12-10-2018 ABD1_21040 16d8f02fee6445ad69cfd8790e8b4f12 461 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 442 2.5E-218 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 SUPERFAMILY SSF51735 12 244 1.19E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 Pfam PF00106 short chain dehydrogenase 17 212 1.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 Gene3D G3DSA:3.40.50.720 3 248 3.8E-66 T 12-10-2018 ABD1_00320 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 Gene3D G3DSA:3.10.450.70 18 83 4.1E-12 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 SUPERFAMILY SSF54423 29 81 8.83E-14 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 SUPERFAMILY SSF52833 88 234 2.65E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 Gene3D G3DSA:3.40.30.10 98 235 1.8E-39 T 12-10-2018 ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 5.3E-17 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ABD1_27700 c992c65f78506e9b6ed5d3421f04c6cb 236 Pfam PF13098 Thioredoxin-like domain 108 232 2.3E-30 T 12-10-2018 IPR012336 Thioredoxin-like fold ABD1_10510 a0db954d1e5daa844626cb6b2064b37d 548 Pfam PF00884 Sulfatase 241 532 8.7E-56 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABD1_10510 a0db954d1e5daa844626cb6b2064b37d 548 SUPERFAMILY SSF53649 241 534 2.07E-25 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABD1_10510 a0db954d1e5daa844626cb6b2064b37d 548 Gene3D G3DSA:3.40.720.10 219 548 1.8E-92 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_10510 a0db954d1e5daa844626cb6b2064b37d 548 Pfam PF08019 Domain of unknown function (DUF1705) 62 212 5.7E-42 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 ABD1_20190 f7113597429e1f6de86efda62523c67c 287 SUPERFAMILY SSF103481 183 282 7.72E-9 T 12-10-2018 ABD1_20190 f7113597429e1f6de86efda62523c67c 287 Pfam PF00892 EamA-like transporter family 149 280 4.6E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_20190 f7113597429e1f6de86efda62523c67c 287 Pfam PF00892 EamA-like transporter family 6 135 3.4E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_20190 f7113597429e1f6de86efda62523c67c 287 SUPERFAMILY SSF103481 42 132 6.67E-10 T 12-10-2018 ABD1_18620 49969c6a140ec79987e0783a1ea4fc3d 395 SUPERFAMILY SSF103473 1 383 6.15E-78 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18620 49969c6a140ec79987e0783a1ea4fc3d 395 Gene3D G3DSA:1.20.1250.20 1 391 2.7E-72 T 12-10-2018 ABD1_18620 49969c6a140ec79987e0783a1ea4fc3d 395 Pfam PF07690 Major Facilitator Superfamily 1 343 5.6E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_30690 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 Gene3D G3DSA:1.20.1440.20 19 195 1.6E-64 T 12-10-2018 IPR023353 LemA-like domain superfamily ABD1_30690 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 Pfam PF04011 LemA family 14 195 2.8E-67 T 12-10-2018 IPR007156 LemA ABD1_30690 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 SUPERFAMILY SSF140478 27 184 1.27E-52 T 12-10-2018 IPR023353 LemA-like domain superfamily ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 Gene3D G3DSA:3.40.50.790 68 159 4.0E-76 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.091 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 PIRSF PIRSF002155 1 227 9.1E-75 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 1.0E-49 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.8E-100 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 SUPERFAMILY SSF56808 6 227 3.92E-79 T 12-10-2018 IPR023674 Ribosomal protein L1-like ABD1_02610 fb030f1fb018c18ee3c02781427c724f 231 Gene3D G3DSA:3.30.190.20 21 225 4.0E-76 T 12-10-2018 ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 Gene3D G3DSA:3.40.50.300 11 296 7.1E-94 T 12-10-2018 ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 SUPERFAMILY SSF52540 6 231 5.06E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 SUPERFAMILY SSF52540 8 151 1.77E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 Pfam PF01715 IPP transferase 41 293 4.4E-79 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 Gene3D G3DSA:1.10.20.140 114 186 7.1E-94 T 12-10-2018 ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 2.1E-90 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABD1_21130 db1fa13ca398ece9926ff731ded642bb 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 29.269 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABD1_29880 263448f2ddbb70683b4a42f2f4f07e50 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 6.8E-83 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ABD1_29880 263448f2ddbb70683b4a42f2f4f07e50 258 Pfam PF02405 Permease MlaE 41 252 3.7E-71 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 ABD1_04250 5de0bcbb16240e94334c887769fcd376 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 4.9E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABD1_04250 5de0bcbb16240e94334c887769fcd376 134 Gene3D G3DSA:3.30.420.270 61 130 7.7E-13 T 12-10-2018 ABD1_27510 f6513608074663f51440769509e92945 278 Pfam PF08907 Domain of unknown function (DUF1853) 1 256 1.9E-45 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 289 3.7E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 300 1.5E-117 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 300 3.6E-138 T 12-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 Gene3D G3DSA:3.40.50.1100 19 296 8.5E-106 T 12-10-2018 ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 SUPERFAMILY SSF53686 17 300 4.85E-90 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABD1_05820 1d27bcba7e9af5258a425912e6e550d7 304 Gene3D G3DSA:3.40.50.1100 46 161 8.5E-106 T 12-10-2018 ABD1_05450 569df2fa3234e60bbb6c053c7be5c51e 323 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 1.4E-116 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ABD1_05450 569df2fa3234e60bbb6c053c7be5c51e 323 SUPERFAMILY SSF53187 15 321 3.64E-61 T 12-10-2018 ABD1_05450 569df2fa3234e60bbb6c053c7be5c51e 323 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 323 108.373 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ABD1_05450 569df2fa3234e60bbb6c053c7be5c51e 323 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 321 9.0E-49 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ABD1_05450 569df2fa3234e60bbb6c053c7be5c51e 323 Gene3D G3DSA:3.40.630.10 1 323 6.9E-105 T 12-10-2018 ABD1_16980 5093693c7c80c4775eeaa94420e34c3a 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 2.4E-56 T 12-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 SUPERFAMILY SSF57783 1 34 1.26E-14 T 12-10-2018 ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 114 9.5E-49 T 12-10-2018 IPR004624 PhnA protein ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.0E-17 T 12-10-2018 IPR013987 PhnA protein, N-terminal ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 SUPERFAMILY SSF82057 39 114 1.01E-27 T 12-10-2018 ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 Gene3D G3DSA:2.20.25.10 1 41 1.1E-19 T 12-10-2018 ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 Gene3D G3DSA:2.30.30.40 42 114 1.3E-33 T 12-10-2018 ABD1_27660 0a360815121f8a9309cf8a54c14f8526 114 Pfam PF03831 PhnA domain 44 114 7.1E-34 T 12-10-2018 IPR013988 PhnA protein, C-terminal ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 SUPERFAMILY SSF101386 1 96 3.6E-23 T 12-10-2018 ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 Gene3D G3DSA:1.10.287.1080 125 252 1.9E-37 T 12-10-2018 ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 Gene3D G3DSA:1.10.287.1080 1 120 3.0E-42 T 12-10-2018 ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 3.2E-24 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 159 218 7.9E-8 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 TIGRFAM TIGR00444 mazG: MazG family protein 7 249 5.6E-79 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG ABD1_05870 58f904e723f332b11cd2b8b476e8fc29 268 SUPERFAMILY SSF101386 140 224 6.35E-19 T 12-10-2018 ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 256 1.4E-77 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 196 213 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 238 256 3.4E-38 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 SUPERFAMILY SSF63829 7 282 2.94E-59 T 12-10-2018 ABD1_18290 bbc07a7f375076fd3a1388191e36eb3f 292 Gene3D G3DSA:2.120.10.30 1 292 3.0E-92 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABD1_07290 c98d64330f67add1dd87fd0954af463a 547 Gene3D G3DSA:1.20.1250.20 33 228 3.6E-17 T 12-10-2018 ABD1_07290 c98d64330f67add1dd87fd0954af463a 547 SUPERFAMILY SSF103473 25 449 4.45E-22 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_07290 c98d64330f67add1dd87fd0954af463a 547 Pfam PF07690 Major Facilitator Superfamily 44 439 2.0E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_28970 dbe682652b43bac37baa764174e142cf 537 Gene3D G3DSA:3.90.226.10 1 271 2.8E-69 T 12-10-2018 ABD1_28970 dbe682652b43bac37baa764174e142cf 537 Pfam PF01039 Carboxyl transferase domain 49 524 8.6E-120 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABD1_28970 dbe682652b43bac37baa764174e142cf 537 SUPERFAMILY SSF52096 278 534 4.42E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_28970 dbe682652b43bac37baa764174e142cf 537 SUPERFAMILY SSF52096 36 268 1.16E-56 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_28970 dbe682652b43bac37baa764174e142cf 537 Gene3D G3DSA:3.90.226.10 273 537 2.5E-90 T 12-10-2018 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Pfam PF03466 LysR substrate binding domain 92 292 1.9E-52 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 SUPERFAMILY SSF46785 1 111 1.58E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Gene3D G3DSA:3.40.190.290 92 294 9.5E-43 T 12-10-2018 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 SUPERFAMILY SSF53850 93 292 1.3E-46 T 12-10-2018 ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Gene3D G3DSA:1.10.10.10 1 86 5.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_07200 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 SUPERFAMILY SSF55681 7 319 8.66E-48 T 12-10-2018 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 Pfam PF13393 Histidyl-tRNA synthetase 12 322 1.2E-98 T 12-10-2018 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 PIRSF PIRSF001549 322 376 59.0 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 PIRSF PIRSF001549 6 361 7.1E-32 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 Gene3D G3DSA:3.30.930.10 4 326 3.6E-57 T 12-10-2018 ABD1_11880 d3fdad2bec856d124ff1a3323a692571 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 367 25.998 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 ABD1_29790 6c33e20fc6356f974e85badfbe9eea64 271 SUPERFAMILY SSF51735 7 230 9.6E-23 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_29790 6c33e20fc6356f974e85badfbe9eea64 271 Pfam PF13460 NAD(P)H-binding 9 190 6.9E-8 T 12-10-2018 IPR016040 NAD(P)-binding domain ABD1_29790 6c33e20fc6356f974e85badfbe9eea64 271 Gene3D G3DSA:3.40.50.720 1 269 1.5E-52 T 12-10-2018 ABD1_08160 2e9d51f61a9879fac23f41a03fad5fbc 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 279 1.5E-79 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_08160 2e9d51f61a9879fac23f41a03fad5fbc 293 PIRSF PIRSF007580 2 292 2.2E-69 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_23860 ebf4bf38f231c6108c8f34eac996b6b6 286 Gene3D G3DSA:3.40.50.80 131 273 4.7E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_23860 ebf4bf38f231c6108c8f34eac996b6b6 286 Pfam PF04954 Siderophore-interacting protein 136 252 1.2E-22 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain ABD1_23860 ebf4bf38f231c6108c8f34eac996b6b6 286 Gene3D G3DSA:2.40.30.10 22 126 5.5E-15 T 12-10-2018 ABD1_23860 ebf4bf38f231c6108c8f34eac996b6b6 286 SUPERFAMILY SSF63380 26 129 4.45E-5 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_23860 ebf4bf38f231c6108c8f34eac996b6b6 286 Pfam PF08021 Siderophore-interacting FAD-binding domain 69 125 5.3E-13 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 120 3.7E-25 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 SUPERFAMILY SSF89919 2 110 1.44E-31 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 Pfam PF02033 Ribosome-binding factor A 6 114 1.9E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 Gene3D G3DSA:3.30.300.20 3 111 2.2E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 6.0E-44 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABD1_03110 c50b73a0ee5a1dab527750e28ebd7d91 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 25.164 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABD1_17530 e810d7d3f0ac24092c009b7692d6de6e 252 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 252 130.374 T 12-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ABD1_17530 e810d7d3f0ac24092c009b7692d6de6e 252 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 8 243 1.2E-128 T 12-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ABD1_17530 e810d7d3f0ac24092c009b7692d6de6e 252 Pfam PF03070 TENA/THI-4/PQQC family 22 224 9.7E-62 T 12-10-2018 IPR004305 Thiaminase-2/PQQC ABD1_17530 e810d7d3f0ac24092c009b7692d6de6e 252 Gene3D G3DSA:1.20.910.10 4 251 2.2E-73 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_17530 e810d7d3f0ac24092c009b7692d6de6e 252 SUPERFAMILY SSF48613 8 251 2.67E-73 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_00630 edd354efa468750a5f2303cb7e4b0439 336 Pfam PF00953 Glycosyl transferase family 4 77 224 9.1E-29 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABD1_30430 c2abc95941656109f400470564ba4078 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 19.043 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_30430 c2abc95941656109f400470564ba4078 301 SUPERFAMILY SSF55120 12 243 6.62E-81 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_30430 c2abc95941656109f400470564ba4078 301 Gene3D G3DSA:3.30.2350.10 3 247 2.5E-92 T 12-10-2018 ABD1_30430 c2abc95941656109f400470564ba4078 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 245 1.7E-12 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 ABD1_30430 c2abc95941656109f400470564ba4078 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 247 298 3.3E-6 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_30430 c2abc95941656109f400470564ba4078 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 14 221 1.9E-77 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_30430 c2abc95941656109f400470564ba4078 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 8.9E-61 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ABD1_23160 b7123064faee19f48c5c1596f32d4711 359 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 317 341 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_23160 b7123064faee19f48c5c1596f32d4711 359 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 6 359 26.98 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_23160 b7123064faee19f48c5c1596f32d4711 359 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 359 1.3E-126 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_23160 b7123064faee19f48c5c1596f32d4711 359 Pfam PF01098 Cell cycle protein 16 358 5.2E-103 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 Pfam PF01223 DNA/RNA non-specific endonuclease 72 263 4.1E-44 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 SMART SM00892 79 268 1.6E-44 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 Gene3D G3DSA:3.40.570.10 63 282 1.2E-56 T 12-10-2018 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 139 147 - T 12-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 SUPERFAMILY SSF54060 54 275 3.24E-64 T 12-10-2018 ABD1_31300 2054fa1dc7a91db1582d3c0a6116fe4f 359 SMART SM00477 80 268 1.6E-40 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.50.11270 12 96 5.4E-114 T 12-10-2018 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.1010.20 97 197 5.4E-114 T 12-10-2018 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.725 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 Pfam PF02401 LytB protein 3 283 4.2E-95 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.1010.20 6 283 5.4E-114 T 12-10-2018 ABD1_30570 109b439aeb5b464f7660a8490363f669 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 1.6E-101 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 Gene3D G3DSA:3.40.50.12780 36 470 1.2E-62 T 12-10-2018 ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 Pfam PF00501 AMP-binding enzyme 51 477 2.7E-61 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 SUPERFAMILY SSF56801 50 577 4.97E-97 T 12-10-2018 ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 1.1E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_03700 a27aa58e180461533357de04ec7e0b5e 613 Gene3D G3DSA:3.30.300.30 473 581 5.2E-13 T 12-10-2018 ABD1_00590 46c12729508f6c8e04bbabfb3ea067c8 369 Gene3D G3DSA:3.40.50.720 1 248 4.0E-81 T 12-10-2018 ABD1_00590 46c12729508f6c8e04bbabfb3ea067c8 369 SUPERFAMILY SSF51735 1 211 6.44E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00590 46c12729508f6c8e04bbabfb3ea067c8 369 Gene3D G3DSA:2.60.120.10 250 366 2.0E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_00590 46c12729508f6c8e04bbabfb3ea067c8 369 SUPERFAMILY SSF51182 238 364 9.65E-21 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_00590 46c12729508f6c8e04bbabfb3ea067c8 369 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 186 2.6E-12 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_22230 4bb4ee63fe5fa335b445bb2e14cb725f 181 Pfam PF01810 LysE type translocator 13 138 4.4E-12 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_22970 7fa3c71bc941c0d1b07c15d52a1eb76c 109 SUPERFAMILY SSF103481 4 105 7.59E-21 T 12-10-2018 ABD1_22970 7fa3c71bc941c0d1b07c15d52a1eb76c 109 Gene3D G3DSA:1.10.3730.20 1 108 9.0E-39 T 12-10-2018 ABD1_22970 7fa3c71bc941c0d1b07c15d52a1eb76c 109 Pfam PF00893 Small Multidrug Resistance protein 1 92 2.5E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABD1_12070 77344943745bc5bf7cc19b448fa49668 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 237 4.4E-53 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABD1_12070 77344943745bc5bf7cc19b448fa49668 238 Gene3D G3DSA:3.40.50.150 34 238 2.7E-57 T 12-10-2018 ABD1_12070 77344943745bc5bf7cc19b448fa49668 238 Pfam PF02390 Putative methyltransferase 64 230 5.0E-51 T 12-10-2018 ABD1_12070 77344943745bc5bf7cc19b448fa49668 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 28.855 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABD1_12070 77344943745bc5bf7cc19b448fa49668 238 SUPERFAMILY SSF53335 45 235 6.17E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_27040 94b22c1c9e46fce208bdfd5ca037e745 153 SUPERFAMILY SSF141322 86 148 1.7E-6 T 12-10-2018 ABD1_27040 94b22c1c9e46fce208bdfd5ca037e745 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 149 8.9E-16 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain ABD1_27040 94b22c1c9e46fce208bdfd5ca037e745 153 Gene3D G3DSA:2.40.50.140 77 153 2.3E-9 T 12-10-2018 ABD1_18610 b7aed7aa060a8c45d557ec8ccd1cf027 332 PIRSF PIRSF033905 1 329 4.9E-156 T 12-10-2018 IPR009645 Uncharacterised conserved protein GguC ABD1_18610 b7aed7aa060a8c45d557ec8ccd1cf027 332 Gene3D G3DSA:3.90.850.10 109 320 2.6E-11 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_18610 b7aed7aa060a8c45d557ec8ccd1cf027 332 SUPERFAMILY SSF56529 116 312 2.38E-23 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABD1_24160 da9263cd3b640d9b3635093000e227a8 729 SUPERFAMILY SSF103473 22 416 2.88E-21 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_24160 da9263cd3b640d9b3635093000e227a8 729 Pfam PF07690 Major Facilitator Superfamily 31 417 1.6E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_24160 da9263cd3b640d9b3635093000e227a8 729 Gene3D G3DSA:1.20.1250.20 23 412 3.2E-11 T 12-10-2018 ABD1_24160 da9263cd3b640d9b3635093000e227a8 729 SUPERFAMILY SSF103473 625 726 1.23E-6 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_04050 40c29e74cb904c1201c9d3e2672d1e03 81 Pfam PF04102 SlyX 16 81 1.1E-16 T 12-10-2018 IPR007236 SlyX ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 SUPERFAMILY SSF47616 77 202 6.96E-35 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 Gene3D G3DSA:3.40.30.10 2 203 1.2E-83 T 12-10-2018 ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 2.5E-13 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 195 2.3E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 Gene3D G3DSA:1.20.1050.10 87 194 1.2E-83 T 12-10-2018 ABD1_05990 22c041369335b70d712887dd5e1feaf3 206 SUPERFAMILY SSF52833 1 83 6.35E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_16550 16e5b307be496d642fc76c386e009e70 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 386 2.8E-104 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ABD1_16550 16e5b307be496d642fc76c386e009e70 391 SUPERFAMILY SSF53756 7 356 3.53E-27 T 12-10-2018 ABD1_16550 16e5b307be496d642fc76c386e009e70 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 373 1.7E-106 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ABD1_16550 16e5b307be496d642fc76c386e009e70 391 Gene3D G3DSA:3.40.50.2000 201 366 1.5E-5 T 12-10-2018 ABD1_16550 16e5b307be496d642fc76c386e009e70 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 35.901 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ABD1_16810 22d9049139f15d617381ca58e5d11fcb 101 Hamap MF_01866 Protein YcgL [ycgL]. 1 95 24.086 T 12-10-2018 IPR027354 YcgL domain ABD1_16810 22d9049139f15d617381ca58e5d11fcb 101 Gene3D G3DSA:3.10.510.20 1 83 1.5E-31 T 12-10-2018 IPR038068 YcgL-like superfamily ABD1_16810 22d9049139f15d617381ca58e5d11fcb 101 Pfam PF05166 YcgL domain 3 84 1.5E-29 T 12-10-2018 IPR027354 YcgL domain ABD1_16810 22d9049139f15d617381ca58e5d11fcb 101 SUPERFAMILY SSF160191 1 85 2.22E-28 T 12-10-2018 IPR038068 YcgL-like superfamily ABD1_16810 22d9049139f15d617381ca58e5d11fcb 101 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 85 2.0E-34 T 12-10-2018 IPR027354 YcgL domain ABD1_15330 4600a303a009bf49b7fc6828f142cec0 248 Pfam PF09992 Phosphodiester glycosidase 74 222 1.7E-21 T 12-10-2018 IPR018711 Phosphodiester glycosidase ABD1_03560 d53cd2b2779cde24dd6181b3a83c5e34 210 Pfam PF02390 Putative methyltransferase 23 176 1.1E-17 T 12-10-2018 ABD1_03560 d53cd2b2779cde24dd6181b3a83c5e34 210 SUPERFAMILY SSF53335 16 160 2.45E-10 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_03560 d53cd2b2779cde24dd6181b3a83c5e34 210 Gene3D G3DSA:3.40.50.150 2 196 3.9E-25 T 12-10-2018 ABD1_02850 7876b5e7dbbb0b89be21e17a6d306167 304 Gene3D G3DSA:2.60.120.330 44 229 1.7E-43 T 12-10-2018 IPR027443 Isopenicillin N synthase-like ABD1_02850 7876b5e7dbbb0b89be21e17a6d306167 304 SUPERFAMILY SSF51197 100 223 4.39E-17 T 12-10-2018 ABD1_02850 7876b5e7dbbb0b89be21e17a6d306167 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 1.2E-47 T 12-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 ABD1_14760 99ade2bef39001cd4ebb37787113cdd5 246 Pfam PF03591 AzlC protein 24 164 7.6E-33 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease ABD1_29760 b4a36308704ea6d1521074fa41345876 290 SUPERFAMILY SSF54637 5 112 1.21E-36 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_29760 b4a36308704ea6d1521074fa41345876 290 Pfam PF13622 Thioesterase-like superfamily 33 282 5.0E-53 T 12-10-2018 ABD1_29760 b4a36308704ea6d1521074fa41345876 290 SUPERFAMILY SSF54637 115 283 1.58E-48 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_29760 b4a36308704ea6d1521074fa41345876 290 Gene3D G3DSA:3.10.129.90 2 287 2.2E-96 T 12-10-2018 ABD1_33330 2a97693a9dfdf65788be3f514df7f19e 245 Gene3D G3DSA:3.40.50.1820 1 244 4.4E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_33330 2a97693a9dfdf65788be3f514df7f19e 245 SUPERFAMILY SSF53474 6 244 2.98E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_33330 2a97693a9dfdf65788be3f514df7f19e 245 Pfam PF01738 Dienelactone hydrolase family 22 242 2.0E-44 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ABD1_09050 1d766559bd704129c54c1cafa77c4821 173 Pfam PF07883 Cupin domain 79 148 2.4E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel ABD1_09050 1d766559bd704129c54c1cafa77c4821 173 SUPERFAMILY SSF51182 44 167 6.54E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_09050 1d766559bd704129c54c1cafa77c4821 173 Gene3D G3DSA:2.60.120.10 41 173 6.5E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_25200 fbe189bf62bbdc3edfcf231ad928ba4b 263 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 252 7.9E-97 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABD1_25200 fbe189bf62bbdc3edfcf231ad928ba4b 263 SUPERFAMILY SSF161098 3 250 2.4E-57 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_25200 fbe189bf62bbdc3edfcf231ad928ba4b 263 Gene3D G3DSA:1.10.3720.10 1 258 1.3E-70 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_25200 fbe189bf62bbdc3edfcf231ad928ba4b 263 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 1 256 2.0E-124 T 12-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ABD1_25200 fbe189bf62bbdc3edfcf231ad928ba4b 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 258 2.4E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 Gene3D G3DSA:3.40.50.80 100 255 5.1E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_22920 10170e9de49dce61d300d7f71642449f 259 SUPERFAMILY SSF63380 7 99 5.02E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABD1_22920 10170e9de49dce61d300d7f71642449f 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 230 4.6E-8 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 Gene3D G3DSA:2.40.30.10 1 96 9.1E-29 T 12-10-2018 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 4.2E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 SUPERFAMILY SSF52343 102 257 2.88E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABD1_22920 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 7.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 7.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_22920 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 7.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABD1_19180 4b717fe0a62f27664b0cdb06a676ac81 285 Gene3D G3DSA:3.20.20.70 3 285 8.2E-96 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_19180 4b717fe0a62f27664b0cdb06a676ac81 285 Pfam PF00793 DAHP synthetase I family 14 276 1.0E-71 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_19180 4b717fe0a62f27664b0cdb06a676ac81 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 48.426 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_19180 4b717fe0a62f27664b0cdb06a676ac81 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 1.1E-113 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_19180 4b717fe0a62f27664b0cdb06a676ac81 285 SUPERFAMILY SSF51569 8 281 1.19E-100 T 12-10-2018 ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Pfam PF00263 Bacterial type II and III secretion system protein 486 649 1.4E-48 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Gene3D G3DSA:3.30.1370.120 24 186 6.0E-53 T 12-10-2018 IPR038591 NolW-like superfamily ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 614 632 2.1E-34 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 517 527 2.1E-34 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 506 2.1E-34 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 637 651 2.1E-34 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 394 404 2.1E-34 T 12-10-2018 IPR001775 GspD/PilQ family ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 659 5.7E-165 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Gene3D G3DSA:3.30.1370.120 191 258 6.3E-16 T 12-10-2018 IPR038591 NolW-like superfamily ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Pfam PF03958 Bacterial type II/III secretion system short domain 268 394 1.2E-12 T 12-10-2018 IPR005644 NolW-like ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 5.3E-13 T 12-10-2018 IPR005644 NolW-like ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 Pfam PF03958 Bacterial type II/III secretion system short domain 129 185 1.1E-7 T 12-10-2018 IPR005644 NolW-like ABD1_02530 c588a336ef41b2f79fd10479b8986962 758 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 595 628 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ABD1_13510 2e022a17e51130ffb6697f64144dbaf1 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 262 5.5E-66 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_13510 2e022a17e51130ffb6697f64144dbaf1 263 Gene3D G3DSA:1.10.12.10 206 263 1.8E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_13510 2e022a17e51130ffb6697f64144dbaf1 263 Gene3D G3DSA:3.90.226.10 1 205 2.4E-74 T 12-10-2018 ABD1_13510 2e022a17e51130ffb6697f64144dbaf1 263 SUPERFAMILY SSF52096 1 263 1.34E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_13510 2e022a17e51130ffb6697f64144dbaf1 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 263 1.3E-118 T 12-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 Pfam PF13602 Zinc-binding dehydrogenase 193 307 3.6E-13 T 12-10-2018 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 Gene3D G3DSA:3.40.50.720 128 272 1.7E-95 T 12-10-2018 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 1.4E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 SUPERFAMILY SSF51735 118 283 2.18E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 SUPERFAMILY SSF50129 1 144 3.46E-32 T 12-10-2018 IPR011032 GroES-like superfamily ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 Gene3D G3DSA:3.90.180.10 22 309 1.7E-95 T 12-10-2018 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 307 2.7E-150 T 12-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 ABD1_04060 6956bca5acbc71e6a78ee9372bc0a576 310 SMART SM00829 10 309 3.0E-8 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 Gene3D G3DSA:1.10.530.10 152 314 9.3E-35 T 12-10-2018 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 175 203 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 Pfam PF01464 Transglycosylase SLT domain 158 268 3.1E-21 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 Gene3D G3DSA:3.40.190.10 1 130 4.4E-12 T 12-10-2018 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 2 64 1.2E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_26070 de06082c699657105ce59887cb29b1bd 315 SUPERFAMILY SSF53850 5 66 3.26E-7 T 12-10-2018 ABD1_26070 de06082c699657105ce59887cb29b1bd 315 SUPERFAMILY SSF53955 112 305 4.78E-32 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_26260 b0a6f3d31f29f062879561ecbc28a532 222 SUPERFAMILY SSF53335 62 209 8.2E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_26260 b0a6f3d31f29f062879561ecbc28a532 222 Gene3D G3DSA:3.40.50.150 51 212 5.8E-21 T 12-10-2018 ABD1_26260 b0a6f3d31f29f062879561ecbc28a532 222 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 88 155 3.0E-14 T 12-10-2018 ABD1_03590 04f8daa57af3e5b71c03e1dcf1dbf28a 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 121 18.144 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABD1_03590 04f8daa57af3e5b71c03e1dcf1dbf28a 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 2.2E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABD1_03590 04f8daa57af3e5b71c03e1dcf1dbf28a 126 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 2.4E-31 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABD1_04790 bb6968ab6124d3b092891f55b9d81495 264 Pfam PF01553 Acyltransferase 80 201 1.2E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_04790 bb6968ab6124d3b092891f55b9d81495 264 SMART SM00563 93 204 4.0E-14 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_04790 bb6968ab6124d3b092891f55b9d81495 264 SUPERFAMILY SSF69593 38 259 3.4E-32 T 12-10-2018 ABD1_27600 33c7dbfb88aff45051df9734550c654d 127 SUPERFAMILY SSF52172 6 126 1.71E-38 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_27600 33c7dbfb88aff45051df9734550c654d 127 Gene3D G3DSA:3.40.50.12740 7 127 9.0E-41 T 12-10-2018 ABD1_27600 33c7dbfb88aff45051df9734550c654d 127 Pfam PF00072 Response regulator receiver domain 10 122 5.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_27600 33c7dbfb88aff45051df9734550c654d 127 SMART SM00448 8 121 8.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_14530 428a7e5e61b91b37dba24ac7cc63bbe9 142 Pfam PF03960 ArsC family 8 115 2.8E-16 T 12-10-2018 IPR006660 Arsenate reductase-like ABD1_14530 428a7e5e61b91b37dba24ac7cc63bbe9 142 Gene3D G3DSA:3.40.30.10 2 142 5.4E-56 T 12-10-2018 ABD1_14530 428a7e5e61b91b37dba24ac7cc63bbe9 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 2.0E-39 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ABD1_14530 428a7e5e61b91b37dba24ac7cc63bbe9 142 SUPERFAMILY SSF52833 5 138 2.24E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_00920 1c0305eddaa1e92600f4dd13aa9cb858 124 SUPERFAMILY SSF89946 3 121 1.03E-34 T 12-10-2018 IPR036701 RraB-like superfamily ABD1_00920 1c0305eddaa1e92600f4dd13aa9cb858 124 Gene3D G3DSA:3.30.70.970 2 122 8.6E-11 T 12-10-2018 IPR036701 RraB-like superfamily ABD1_00920 1c0305eddaa1e92600f4dd13aa9cb858 124 Pfam PF06877 Regulator of ribonuclease activity B 11 110 4.4E-27 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 485 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 507 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 210 229 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 320 336 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 553 570 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 138 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 192 210 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 351 370 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 526 541 6.2E-61 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 SUPERFAMILY SSF56235 84 657 2.51E-144 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 92 650 2.6E-108 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 Gene3D G3DSA:1.10.246.130 336 468 8.1E-39 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 Gene3D G3DSA:3.60.20.40 469 657 1.5E-46 T 12-10-2018 ABD1_08560 561482e72f5b5be1049dfdf277b759e4 661 Pfam PF01019 Gamma-glutamyltranspeptidase 106 653 7.5E-140 T 12-10-2018 ABD1_07920 d8189adc0cd8eb159c6fbeaacd5cf76b 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 243 6.3E-61 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABD1_07920 d8189adc0cd8eb159c6fbeaacd5cf76b 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 245 1.7E-51 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABD1_07920 d8189adc0cd8eb159c6fbeaacd5cf76b 245 SUPERFAMILY SSF64438 27 244 2.75E-66 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABD1_07920 d8189adc0cd8eb159c6fbeaacd5cf76b 245 Gene3D G3DSA:3.60.140.10 17 245 1.0E-67 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ABD1_13310 a331be39b79ed123652cae7d9a9c66e0 144 Pfam PF03891 Domain of unknown function (DUF333) 33 76 5.4E-22 T 12-10-2018 IPR005590 Protein of unknown function DUF333 ABD1_13310 a331be39b79ed123652cae7d9a9c66e0 144 Gene3D G3DSA:3.30.10.10 77 143 5.1E-19 T 12-10-2018 ABD1_13310 a331be39b79ed123652cae7d9a9c66e0 144 Pfam PF11720 Peptidase inhibitor I78 family 81 144 9.5E-10 T 12-10-2018 IPR021719 Proteinase inhibitor I78 ABD1_27890 c020ed069edab2ae6d0fb2919f540c6c 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 141 1.4E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_27890 c020ed069edab2ae6d0fb2919f540c6c 147 SUPERFAMILY SSF54593 1 143 5.64E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_27890 c020ed069edab2ae6d0fb2919f540c6c 147 Gene3D G3DSA:3.10.180.10 7 147 7.8E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_22680 ce717e688469cde7125b83bcb755d527 422 Gene3D G3DSA:3.90.1860.10 12 422 4.3E-121 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_22680 ce717e688469cde7125b83bcb755d527 422 Pfam PF01139 tRNA-splicing ligase RtcB 49 422 2.9E-135 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_22680 ce717e688469cde7125b83bcb755d527 422 SUPERFAMILY SSF103365 26 422 8.76E-142 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 SUPERFAMILY SSF48179 185 281 4.59E-23 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 SUPERFAMILY SSF52413 285 414 4.58E-34 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 PIRSF PIRSF500134 1 420 5.4E-117 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 PIRSF PIRSF000124 1 419 4.3E-109 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 SMART SM00984 300 404 1.2E-38 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 Gene3D G3DSA:1.20.5.100 187 214 1.1E-10 T 12-10-2018 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 SUPERFAMILY SSF51735 1 188 4.46E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 300 404 8.1E-26 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 400 8.8E-60 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 Gene3D G3DSA:3.40.50.720 215 420 4.1E-64 T 12-10-2018 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 186 276 1.2E-24 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABD1_00660 f6cd3e80b2f5eb681de1d655803bb458 420 Gene3D G3DSA:3.40.50.720 1 186 8.4E-17 T 12-10-2018 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 SUPERFAMILY SSF53720 27 428 1.61E-88 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.6E-78 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 40.562 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.1E-160 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 PIRSF PIRSF000099 1 429 8.9E-157 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 Gene3D G3DSA:3.40.50.1980 234 350 1.7E-124 T 12-10-2018 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 Gene3D G3DSA:3.40.50.1980 31 232 1.7E-124 T 12-10-2018 ABD1_06350 8fe60c4498d1b2a40a9d3df6679a8630 429 Pfam PF00815 Histidinol dehydrogenase 25 427 8.4E-168 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABD1_20480 f211afc6252d38fe1c32efe8a6559d18 415 Gene3D G3DSA:2.130.10.10 50 415 3.9E-96 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABD1_20480 f211afc6252d38fe1c32efe8a6559d18 415 SUPERFAMILY SSF51004 99 395 3.53E-44 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily ABD1_20480 f211afc6252d38fe1c32efe8a6559d18 415 Pfam PF10282 Lactonase, 7-bladed beta-propeller 58 413 4.0E-88 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller ABD1_20650 4ce94fb6d1163def9133b4c673408fb9 239 Pfam PF02308 MgtC family 21 141 2.5E-35 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_20650 4ce94fb6d1163def9133b4c673408fb9 239 PRINTS PR01837 MgtC/SapB protein signature 96 120 1.6E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_20650 4ce94fb6d1163def9133b4c673408fb9 239 PRINTS PR01837 MgtC/SapB protein signature 69 91 1.6E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_20650 4ce94fb6d1163def9133b4c673408fb9 239 PRINTS PR01837 MgtC/SapB protein signature 43 61 1.6E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_20650 4ce94fb6d1163def9133b4c673408fb9 239 PRINTS PR01837 MgtC/SapB protein signature 24 43 1.6E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABD1_04700 14c861013de04159965cedffc6dabd06 410 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 29 387 76.858 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABD1_04700 14c861013de04159965cedffc6dabd06 410 Gene3D G3DSA:3.20.20.70 91 372 1.4E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_04700 14c861013de04159965cedffc6dabd06 410 SUPERFAMILY SSF102114 135 355 1.15E-16 T 12-10-2018 ABD1_04700 14c861013de04159965cedffc6dabd06 410 Gene3D G3DSA:1.10.150.530 29 90 3.5E-26 T 12-10-2018 ABD1_04700 14c861013de04159965cedffc6dabd06 410 PIRSF PIRSF006004 21 401 2.9E-148 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ABD1_04700 14c861013de04159965cedffc6dabd06 410 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 28 392 2.1E-144 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABD1_04700 14c861013de04159965cedffc6dabd06 410 Pfam PF04055 Radical SAM superfamily 139 312 3.9E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_05000 5ab829adb5b4b9f144b58822bb5840ef 138 Pfam PF00581 Rhodanese-like domain 47 126 6.6E-12 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_05000 5ab829adb5b4b9f144b58822bb5840ef 138 Gene3D G3DSA:3.40.250.10 37 136 1.8E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_05000 5ab829adb5b4b9f144b58822bb5840ef 138 SMART SM00450 37 130 1.5E-14 T 12-10-2018 IPR001763 Rhodanese-like domain ABD1_05000 5ab829adb5b4b9f144b58822bb5840ef 138 SUPERFAMILY SSF52821 16 134 1.57E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily ABD1_00090 74eb935cfd63c9a9f88996f940a39d79 335 Gene3D G3DSA:3.40.190.170 53 246 8.4E-10 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABD1_00090 74eb935cfd63c9a9f88996f940a39d79 335 SUPERFAMILY SSF53850 126 220 5.84E-5 T 12-10-2018 ABD1_27490 2a0530e524e643dd4e017c2ecdca0699 167 SUPERFAMILY SSF141523 8 161 3.27E-22 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABD1_27490 2a0530e524e643dd4e017c2ecdca0699 167 Pfam PF03734 L,D-transpeptidase catalytic domain 11 157 7.3E-15 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABD1_27490 2a0530e524e643dd4e017c2ecdca0699 167 Gene3D G3DSA:2.40.440.10 3 167 7.0E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABD1_16350 ab19494d386be3b46099040465058d58 613 Gene3D G3DSA:1.10.510.40 394 613 4.8E-69 T 12-10-2018 ABD1_16350 ab19494d386be3b46099040465058d58 613 Pfam PF06276 Ferric iron reductase FhuF-like transporter 425 594 7.1E-34 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain ABD1_16350 ab19494d386be3b46099040465058d58 613 Pfam PF04183 IucA / IucC family 158 403 9.8E-74 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 PIRSF PIRSF000190 1 218 8.9E-75 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 35.948 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 SUPERFAMILY SSF50475 15 218 8.64E-61 T 12-10-2018 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 Gene3D G3DSA:2.30.110.10 4 218 4.3E-76 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.9E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 5.1E-23 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_32140 4a19b78d953608d511ed477528ac14da 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 1.4E-75 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABD1_14230 3335e0944b9c003c892fa08686fb0f15 293 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 293 141.641 T 12-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 ABD1_14230 3335e0944b9c003c892fa08686fb0f15 293 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 13 282 1.6E-99 T 12-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 ABD1_14230 3335e0944b9c003c892fa08686fb0f15 293 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 16 280 1.0E-67 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 ABD1_26700 0eb3bb03eecf2c160b82f87da4bfbd34 186 Pfam PF12724 Flavodoxin domain 8 77 3.7E-8 T 12-10-2018 IPR026816 Flavodoxin domain ABD1_26700 0eb3bb03eecf2c160b82f87da4bfbd34 186 Gene3D G3DSA:3.40.50.360 1 185 1.8E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_26700 0eb3bb03eecf2c160b82f87da4bfbd34 186 SUPERFAMILY SSF52218 5 184 2.23E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_24420 f2fe39948bb04077b9ad237e76ee5eca 223 Gene3D G3DSA:3.30.70.2970 34 136 5.7E-20 T 12-10-2018 ABD1_24420 f2fe39948bb04077b9ad237e76ee5eca 223 Pfam PF04402 Protein of unknown function (DUF541) 22 217 3.6E-25 T 12-10-2018 IPR007497 Protein of unknown function DUF541 ABD1_24420 f2fe39948bb04077b9ad237e76ee5eca 223 Gene3D G3DSA:3.30.110.170 24 215 5.7E-20 T 12-10-2018 ABD1_18810 a698cd7229677782a78866439ee4cf76 245 Gene3D G3DSA:3.40.50.720 1 244 1.4E-66 T 12-10-2018 ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 4.8E-54 T 12-10-2018 ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_18810 a698cd7229677782a78866439ee4cf76 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_18810 a698cd7229677782a78866439ee4cf76 245 SUPERFAMILY SSF51735 3 244 9.63E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_15910 0cb528055a4bdac72d5baef6139f7a2b 140 Gene3D G3DSA:3.30.420.270 63 132 4.8E-10 T 12-10-2018 ABD1_15910 0cb528055a4bdac72d5baef6139f7a2b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 6.0E-29 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABD1_26750 817fd71b5893b9d62268c811e2e56590 262 Gene3D G3DSA:3.90.640.20 169 257 2.7E-17 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily ABD1_26750 817fd71b5893b9d62268c811e2e56590 262 Gene3D G3DSA:3.30.565.40 52 168 6.4E-13 T 12-10-2018 ABD1_26750 817fd71b5893b9d62268c811e2e56590 262 Pfam PF11738 Protein of unknown function (DUF3298) 174 242 1.7E-9 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 ABD1_21320 e80d4c4b0cd9b1928e74d50afe608f01 440 Pfam PF07690 Major Facilitator Superfamily 18 312 1.7E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_21320 e80d4c4b0cd9b1928e74d50afe608f01 440 SUPERFAMILY SSF103473 10 428 1.14E-33 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_21320 e80d4c4b0cd9b1928e74d50afe608f01 440 Gene3D G3DSA:1.20.1250.20 7 425 1.3E-31 T 12-10-2018 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 13 488 1.8E-164 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 Pfam PF02637 GatB domain 337 488 3.6E-52 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 SUPERFAMILY SSF89095 306 413 2.22E-33 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 SUPERFAMILY SSF55931 14 305 1.5E-115 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 Gene3D G3DSA:1.10.150.380 306 427 5.4E-34 T 12-10-2018 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 Pfam PF02934 GatB/GatE catalytic domain 15 298 3.7E-108 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 154 168 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 SMART SM00845 337 488 3.3E-80 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 Gene3D G3DSA:1.10.10.410 429 489 1.6E-25 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABD1_27310 bfcd0aefa8df7359f48c365b15d78c76 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 489 37.674 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABD1_20440 b8dada04b7e932a6f959addbf9d4bbb7 342 Gene3D G3DSA:3.40.50.1820 70 337 5.3E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_20440 b8dada04b7e932a6f959addbf9d4bbb7 342 SUPERFAMILY SSF53474 71 326 3.15E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_20440 b8dada04b7e932a6f959addbf9d4bbb7 342 Pfam PF12146 Serine aminopeptidase, S33 83 318 9.5E-33 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_07100 ff524dec65ac8d1eb18170f06b4428ce 338 Pfam PF00146 NADH dehydrogenase 24 329 5.6E-121 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07100 ff524dec65ac8d1eb18170f06b4428ce 338 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 336 24.207 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07100 ff524dec65ac8d1eb18170f06b4428ce 338 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07100 ff524dec65ac8d1eb18170f06b4428ce 338 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 SUPERFAMILY SSF53681 118 228 2.78E-34 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 Gene3D G3DSA:3.40.50.1860 104 214 1.9E-83 T 12-10-2018 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 SUPERFAMILY SSF53681 1 113 8.28E-36 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 Gene3D G3DSA:3.40.50.1860 4 223 1.9E-83 T 12-10-2018 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.2E-59 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_21980 32a8bf821702e78cecdcfbe0593e0082 242 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 232 1.3E-72 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 SUPERFAMILY SSF56672 7 246 6.14E-64 T 12-10-2018 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Gene3D G3DSA:1.10.150.20 188 241 1.5E-10 T 12-10-2018 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 366 1.7E-13 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Gene3D G3DSA:3.30.70.270 10 164 9.7E-41 T 12-10-2018 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Pfam PF13438 Domain of unknown function (DUF4113) 380 420 4.2E-6 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Pfam PF00817 impB/mucB/samB family 11 158 5.6E-36 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABD1_11830 16a1b564c9293a71013968fe17ee4039 432 Gene3D G3DSA:2.30.40.20 16 79 9.7E-41 T 12-10-2018 ABD1_20890 0555691a9b7f526826ecc46fc5744d35 339 SMART SM00972 270 336 6.0E-20 T 12-10-2018 IPR007893 Spore coat protein U ABD1_20890 0555691a9b7f526826ecc46fc5744d35 339 Pfam PF05229 Spore Coat Protein U domain 194 336 4.6E-26 T 12-10-2018 IPR007893 Spore coat protein U ABD1_29190 7b994bcf1d51354035b319a5bc6e2db5 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 1.1E-85 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 ABD1_29190 7b994bcf1d51354035b319a5bc6e2db5 191 SUPERFAMILY SSF53271 4 189 8.32E-45 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_29190 7b994bcf1d51354035b319a5bc6e2db5 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.159 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 ABD1_29190 7b994bcf1d51354035b319a5bc6e2db5 191 Gene3D G3DSA:3.40.50.2020 3 188 2.0E-52 T 12-10-2018 ABD1_08780 6b5abcd429b952a5d97d691b8ff9ae2b 546 Gene3D G3DSA:3.50.50.60 205 276 4.6E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08780 6b5abcd429b952a5d97d691b8ff9ae2b 546 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 522 1.8E-191 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABD1_08780 6b5abcd429b952a5d97d691b8ff9ae2b 546 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 524 6.9E-219 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABD1_08780 6b5abcd429b952a5d97d691b8ff9ae2b 546 SUPERFAMILY SSF51905 39 360 1.58E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_08780 6b5abcd429b952a5d97d691b8ff9ae2b 546 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 524 49.345 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABD1_32700 ebfe4932439c034c75c9072e77f4946b 179 SUPERFAMILY SSF48452 3 175 2.96E-67 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_32700 ebfe4932439c034c75c9072e77f4946b 179 Gene3D G3DSA:1.20.58.320 1 78 2.0E-27 T 12-10-2018 ABD1_32700 ebfe4932439c034c75c9072e77f4946b 179 Gene3D G3DSA:1.25.40.10 79 179 1.3E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_32700 ebfe4932439c034c75c9072e77f4946b 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 8.9E-64 T 12-10-2018 IPR010323 Protein of unknown function DUF924 ABD1_12780 9d07bce023fae006271c6252d87076a0 253 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 244 3.9E-48 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_25150 1f0285c2d8c10c13ff1cfc54eb66b02e 199 Pfam PF02223 Thymidylate kinase 5 193 9.2E-54 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ABD1_25150 1f0285c2d8c10c13ff1cfc54eb66b02e 199 SUPERFAMILY SSF52540 1 196 3.08E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_25150 1f0285c2d8c10c13ff1cfc54eb66b02e 199 Gene3D G3DSA:3.40.50.300 1 199 3.1E-65 T 12-10-2018 ABD1_25150 1f0285c2d8c10c13ff1cfc54eb66b02e 199 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 1.0E-54 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABD1_25150 1f0285c2d8c10c13ff1cfc54eb66b02e 199 Hamap MF_00165 Thymidylate kinase [tmk]. 1 198 27.688 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABD1_10750 8141ca4c63b94c86b996f8abe6b3c248 611 PIRSF PIRSF002741 3 600 2.8E-92 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABD1_10750 8141ca4c63b94c86b996f8abe6b3c248 611 Gene3D G3DSA:3.40.190.10 31 595 2.8E-217 T 12-10-2018 ABD1_10750 8141ca4c63b94c86b996f8abe6b3c248 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 512 3.4E-70 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain ABD1_10750 8141ca4c63b94c86b996f8abe6b3c248 611 Gene3D G3DSA:3.10.105.10 314 575 2.8E-217 T 12-10-2018 ABD1_10750 8141ca4c63b94c86b996f8abe6b3c248 611 SUPERFAMILY SSF53850 51 596 1.45E-108 T 12-10-2018 ABD1_04720 308da42d20a02a5f0cb382e446ce4e1f 263 Pfam PF13413 Helix-turn-helix domain 29 89 3.0E-18 T 12-10-2018 ABD1_04720 308da42d20a02a5f0cb382e446ce4e1f 263 Pfam PF13464 Domain of unknown function (DUF4115) 190 261 3.1E-11 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 ABD1_04720 308da42d20a02a5f0cb382e446ce4e1f 263 Gene3D G3DSA:1.10.260.40 18 105 3.9E-22 T 12-10-2018 ABD1_26160 15ec5721fbff04124f40c48d0a56b836 124 Gene3D G3DSA:1.10.3830.10 8 124 8.1E-36 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABD1_26160 15ec5721fbff04124f40c48d0a56b836 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 5.8E-32 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABD1_18500 eeea1cb90986e4123d902abce894e68b 339 Pfam PF12706 Beta-lactamase superfamily domain 95 287 3.6E-44 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_18500 eeea1cb90986e4123d902abce894e68b 339 SUPERFAMILY SSF56281 78 327 2.62E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_18500 eeea1cb90986e4123d902abce894e68b 339 Gene3D G3DSA:3.60.15.10 62 335 8.9E-79 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_18500 eeea1cb90986e4123d902abce894e68b 339 PIRSF PIRSF038896 9 330 6.7E-91 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 ABD1_02780 9a42c892962a9de92e67205be1da968f 135 Gene3D G3DSA:1.10.1660.10 9 135 4.4E-27 T 12-10-2018 ABD1_02780 9a42c892962a9de92e67205be1da968f 135 SUPERFAMILY SSF46955 14 124 4.03E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily ABD1_02780 9a42c892962a9de92e67205be1da968f 135 SMART SM00422 15 83 2.4E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_02780 9a42c892962a9de92e67205be1da968f 135 Pfam PF13411 MerR HTH family regulatory protein 15 80 1.9E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 SUPERFAMILY SSF54211 4 123 1.9E-39 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 SUPERFAMILY SSF54980 128 194 5.18E-8 T 12-10-2018 IPR035647 EF-G domain III/V-like ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 Pfam PF09186 Domain of unknown function (DUF1949) 133 187 4.1E-5 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 2.1E-29 T 12-10-2018 IPR001498 Impact, N-terminal ABD1_12670 e537aed922e2cccb008f98f54dabb14c 199 Gene3D G3DSA:3.30.230.30 1 125 1.0E-44 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily ABD1_15770 7e864db2552f7e6d4716a1fdacde2d16 373 Gene3D G3DSA:3.90.226.10 12 349 8.0E-91 T 12-10-2018 ABD1_15770 7e864db2552f7e6d4716a1fdacde2d16 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 340 9.1E-87 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ABD1_15770 7e864db2552f7e6d4716a1fdacde2d16 373 SUPERFAMILY SSF52096 12 342 1.72E-52 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_13970 5c523ba09c524debe80cfbd5a67372a9 94 Gene3D G3DSA:3.40.630.30 2 94 2.2E-22 T 12-10-2018 ABD1_13970 5c523ba09c524debe80cfbd5a67372a9 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 5.4E-20 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase ABD1_13970 5c523ba09c524debe80cfbd5a67372a9 94 SUPERFAMILY SSF55729 3 92 7.77E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_31170 0bea9e40ff12db81f35398ab11cae8d9 213 SUPERFAMILY SSF53098 14 196 2.28E-38 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_31170 0bea9e40ff12db81f35398ab11cae8d9 213 Pfam PF01612 3'-5' exonuclease 28 195 3.4E-23 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_31170 0bea9e40ff12db81f35398ab11cae8d9 213 SMART SM00474 27 198 8.4E-12 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_31170 0bea9e40ff12db81f35398ab11cae8d9 213 Gene3D G3DSA:3.30.420.10 13 204 1.6E-39 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_29140 636fad8f0ffc8e68f3a48fc641d1cc0c 362 Pfam PF02562 PhoH-like protein 120 323 1.5E-95 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 ABD1_29140 636fad8f0ffc8e68f3a48fc641d1cc0c 362 Gene3D G3DSA:3.40.50.300 117 323 2.0E-75 T 12-10-2018 ABD1_29140 636fad8f0ffc8e68f3a48fc641d1cc0c 362 SUPERFAMILY SSF52540 119 295 6.89E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29140 636fad8f0ffc8e68f3a48fc641d1cc0c 362 SUPERFAMILY SSF54791 13 71 3.36E-5 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:1.10.287.470 99 124 2.3E-13 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 322 9.2E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 51 379 1.9E-16 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 383 8.3E-7 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 262 283 8.3E-7 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 8.3E-7 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:2.40.50.100 65 98 2.3E-13 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:2.40.30.170 264 382 1.2E-33 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 26 378 3.8E-121 T 12-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 63 153 1.11E-9 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 198 301 2.35E-13 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 144 202 1.31E-6 T 12-10-2018 ABD1_08540 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:1.10.287.470 140 207 1.8E-11 T 12-10-2018 ABD1_31520 ca4e475507d3b7ac7c32e3ff926ca68f 212 Pfam PF15648 Restriction endonuclease fold toxin 5 111 190 6.0E-16 T 12-10-2018 IPR028904 Tox-REase-5 domain ABD1_13580 c968f415dc54eb47c9bf8b21835275b6 140 Gene3D G3DSA:1.10.3510.10 2 137 9.1E-8 T 12-10-2018 IPR023138 NMB0513-like superfamily ABD1_13580 c968f415dc54eb47c9bf8b21835275b6 140 SUPERFAMILY SSF160472 9 124 7.72E-10 T 12-10-2018 IPR023138 NMB0513-like superfamily ABD1_32080 ce227bcad0f33fd38c863e34b493af96 430 SUPERFAMILY SSF53756 177 411 5.57E-11 T 12-10-2018 ABD1_32080 ce227bcad0f33fd38c863e34b493af96 430 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 215 7.2E-54 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ABD1_32080 ce227bcad0f33fd38c863e34b493af96 430 Gene3D G3DSA:3.40.50.11720 32 213 1.5E-41 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ABD1_32080 ce227bcad0f33fd38c863e34b493af96 430 Gene3D G3DSA:3.40.50.2000 219 410 8.5E-64 T 12-10-2018 ABD1_15970 b82f17e453aea2055ad4e8d8812916e3 670 Gene3D G3DSA:1.10.1370.10 153 599 1.8E-169 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ABD1_15970 b82f17e453aea2055ad4e8d8812916e3 670 Gene3D G3DSA:1.10.1370.40 65 661 1.8E-169 T 12-10-2018 ABD1_15970 b82f17e453aea2055ad4e8d8812916e3 670 SUPERFAMILY SSF55486 35 662 1.06E-137 T 12-10-2018 ABD1_15970 b82f17e453aea2055ad4e8d8812916e3 670 Pfam PF01432 Peptidase family M3 229 663 3.5E-106 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 SUPERFAMILY SSF46689 3 75 2.0E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 Gene3D G3DSA:1.10.357.10 2 186 1.4E-29 T 12-10-2018 ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 SUPERFAMILY SSF48498 80 181 4.8E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_07300 6126ef4e84221e4af1887b9315a1eb55 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_04210 9600cf0d320738523f522745c06dee3d 171 Pfam PF13972 Bacterial transcriptional repressor 3 149 1.2E-38 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR ABD1_04210 9600cf0d320738523f522745c06dee3d 171 Gene3D G3DSA:1.10.357.10 1 161 2.2E-29 T 12-10-2018 ABD1_01450 3ae4b4b3cc0c7271da2234bbc66478d5 208 PIRSF PIRSF006324 1 206 2.0E-50 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_01450 3ae4b4b3cc0c7271da2234bbc66478d5 208 Pfam PF01810 LysE type translocator 16 201 4.7E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_27440 21220234d5d78d69c035d27b10228de7 409 SUPERFAMILY SSF103473 8 388 4.71E-58 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_27440 21220234d5d78d69c035d27b10228de7 409 Pfam PF07690 Major Facilitator Superfamily 18 361 1.5E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_27440 21220234d5d78d69c035d27b10228de7 409 Gene3D G3DSA:1.20.1720.10 14 393 9.1E-104 T 12-10-2018 ABD1_27440 21220234d5d78d69c035d27b10228de7 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 6.0E-88 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 7.8E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 15 137 5.9E-47 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 SUPERFAMILY SSF54862 40 157 1.17E-26 T 12-10-2018 ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 Gene3D G3DSA:3.30.70.3270 31 174 1.3E-39 T 12-10-2018 ABD1_07110 dbb05ccada4d9794622a8bc88bc05295 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 152 27.034 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 SUPERFAMILY SSF52540 342 519 6.62E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 Pfam PF00005 ABC transporter 22 173 2.4E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 Gene3D G3DSA:3.40.50.300 1 272 8.2E-42 T 12-10-2018 ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 SUPERFAMILY SSF52540 8 226 2.13E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 Gene3D G3DSA:3.40.50.300 302 526 3.6E-31 T 12-10-2018 ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 SMART SM00382 30 216 0.39 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 SMART SM00382 363 526 0.17 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_20710 69b8151bc8c7ab06e3a1a10aef722e62 527 Pfam PF00005 ABC transporter 356 483 5.8E-12 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_08750 c883f107a83a590354340b297fd6d4bd 444 Gene3D G3DSA:1.20.1740.10 2 443 8.6E-62 T 12-10-2018 ABD1_08750 c883f107a83a590354340b297fd6d4bd 444 PIRSF PIRSF006060 3 443 7.6E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_08750 c883f107a83a590354340b297fd6d4bd 444 Pfam PF13520 Amino acid permease 6 408 2.9E-63 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_08750 c883f107a83a590354340b297fd6d4bd 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 438 6.2E-147 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 ABD1_10200 06b8be2bd0ab5677b5374541110e2066 367 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 154 267 1.7E-17 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_10200 06b8be2bd0ab5677b5374541110e2066 367 Pfam PF04233 Phage Mu protein F like protein 151 263 8.7E-13 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_18010 f36f20b72fd626403225fe07c6a95cd3 497 Gene3D G3DSA:3.20.20.70 154 420 5.5E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_18010 f36f20b72fd626403225fe07c6a95cd3 497 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 189 479 3.5E-43 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ABD1_18010 f36f20b72fd626403225fe07c6a95cd3 497 SUPERFAMILY SSF51690 189 494 4.32E-36 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABD1_18010 f36f20b72fd626403225fe07c6a95cd3 497 PIRSF PIRSF005943 1 497 1.6E-175 T 12-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 Pfam PF02253 Phospholipase A1 117 379 1.0E-105 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 352 372 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 169 186 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 294 312 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 244 258 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 277 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 330 347 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 214 233 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 191 207 7.9E-39 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 SUPERFAMILY SSF56931 118 382 1.31E-90 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_19410 5d8eedba1067ca3a767284bedf52cef1 383 Gene3D G3DSA:2.40.230.10 120 383 1.4E-88 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABD1_13770 a78ed471ca8027ed61b6a49218bb27eb 428 SUPERFAMILY SSF56935 84 418 4.97E-28 T 12-10-2018 ABD1_13770 a78ed471ca8027ed61b6a49218bb27eb 428 Gene3D G3DSA:2.40.160.10 216 428 4.3E-8 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_16630 872e601a018d93f7e44ca99a085be295 196 Gene3D G3DSA:1.10.10.690 49 196 1.2E-28 T 12-10-2018 IPR027405 YidB-like ABD1_16630 872e601a018d93f7e44ca99a085be295 196 Pfam PF06078 Bacterial protein of unknown function (DUF937) 17 171 6.1E-16 T 12-10-2018 IPR009282 Protein of unknown function DUF937 ABD1_16630 872e601a018d93f7e44ca99a085be295 196 SUPERFAMILY SSF140804 54 195 8.37E-29 T 12-10-2018 IPR027405 YidB-like ABD1_31870 b20ff7fc41f5d3eeb02988b4f618dcc5 117 Pfam PF06993 Protein of unknown function (DUF1304) 8 114 4.4E-41 T 12-10-2018 IPR009732 Protein of unknown function DUF1304 ABD1_23920 ba616300dd0ca1f0b15ab9a8cae3af21 467 Gene3D G3DSA:2.170.190.11 56 160 1.3E-20 T 12-10-2018 ABD1_23920 ba616300dd0ca1f0b15ab9a8cae3af21 467 Gene3D G3DSA:3.90.105.10 33 193 1.3E-20 T 12-10-2018 ABD1_23920 ba616300dd0ca1f0b15ab9a8cae3af21 467 Gene3D G3DSA:3.40.980.10 194 203 1.3E-20 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABD1_23920 ba616300dd0ca1f0b15ab9a8cae3af21 467 SUPERFAMILY SSF63882 32 194 1.09E-19 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_23920 ba616300dd0ca1f0b15ab9a8cae3af21 467 Pfam PF03453 MoeA N-terminal region (domain I and II) 32 186 1.1E-14 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABD1_16590 6597cdd8828ebbe24c498bf47e473f4d 374 Pfam PF12698 ABC-2 family transporter protein 24 364 1.3E-46 T 12-10-2018 ABD1_23940 f24f7a26de0e00a66129f5a641971707 346 Gene3D G3DSA:3.40.50.720 1 334 2.6E-98 T 12-10-2018 ABD1_23940 f24f7a26de0e00a66129f5a641971707 346 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 5.4E-35 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABD1_23940 f24f7a26de0e00a66129f5a641971707 346 SUPERFAMILY SSF51735 1 331 3.08E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 Gene3D G3DSA:1.20.1250.20 12 433 5.5E-68 T 12-10-2018 ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 SUPERFAMILY SSF103473 12 423 5.1E-70 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_06760 804c15c8e9f6ec8d0beb55d4f8ff5d95 436 Pfam PF07690 Major Facilitator Superfamily 20 374 2.0E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_26110 471ea167f83ccd16138fbb7418f577a7 301 Gene3D G3DSA:3.30.2010.10 74 165 5.0E-34 T 12-10-2018 ABD1_26110 471ea167f83ccd16138fbb7418f577a7 301 Pfam PF01435 Peptidase family M48 81 297 2.1E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABD1_26110 471ea167f83ccd16138fbb7418f577a7 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.605 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 SUPERFAMILY SSF56349 21 297 1.59E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 306 55.775 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Gene3D G3DSA:1.10.150.130 18 109 1.9E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Gene3D G3DSA:1.10.443.10 120 300 1.0E-69 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Pfam PF00589 Phage integrase family 123 291 1.9E-52 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 100 1.9E-14 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 305 2.8E-110 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ABD1_02250 fcdf2ac3c3224b60a267e8270c0d01d4 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 306 55.781 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 Gene3D G3DSA:2.40.440.10 224 415 3.2E-43 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 Pfam PF03734 L,D-transpeptidase catalytic domain 283 410 2.9E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 Pfam PF01471 Putative peptidoglycan binding domain 147 192 3.1E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 SUPERFAMILY SSF47090 145 195 1.37E-11 T 12-10-2018 IPR036365 PGBD-like superfamily ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 SUPERFAMILY SSF141523 283 411 4.84E-27 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABD1_23670 bec57cfa75a0870ae90d8f6a14885e55 415 Gene3D G3DSA:1.10.101.10 141 203 5.4E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABD1_08720 57d6047a824e3dd2fb8b30413c2c03e3 515 Gene3D G3DSA:3.40.50.1820 341 512 2.7E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_08720 57d6047a824e3dd2fb8b30413c2c03e3 515 SUPERFAMILY SSF53474 344 510 1.36E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_08720 57d6047a824e3dd2fb8b30413c2c03e3 515 Pfam PF07819 PGAP1-like protein 348 448 2.5E-6 T 12-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 SMART SM00341 207 287 2.0E-5 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 Gene3D G3DSA:1.10.150.80 297 370 9.3E-10 T 12-10-2018 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 Pfam PF01612 3'-5' exonuclease 3 168 1.7E-20 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 SMART SM00474 2 169 3.9E-14 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 Gene3D G3DSA:1.10.150.80 199 287 2.8E-15 T 12-10-2018 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 SUPERFAMILY SSF53098 3 205 2.47E-44 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_16770 3485afd6a58a0900001e3343d0567120 374 SUPERFAMILY SSF47819 198 290 3.36E-19 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 SUPERFAMILY SSF47819 293 368 8.5E-16 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 Pfam PF00570 HRDC domain 210 276 4.0E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ABD1_16770 3485afd6a58a0900001e3343d0567120 374 Gene3D G3DSA:3.30.420.10 1 190 2.6E-43 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_14020 b1009caa52afc60349637d4196cc7997 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 265 4.4E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14020 b1009caa52afc60349637d4196cc7997 286 SMART SM00062 49 271 4.1E-70 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABD1_14020 b1009caa52afc60349637d4196cc7997 286 SUPERFAMILY SSF53850 9 265 3.17E-60 T 12-10-2018 ABD1_14020 b1009caa52afc60349637d4196cc7997 286 Gene3D G3DSA:3.40.190.10 44 264 5.8E-76 T 12-10-2018 ABD1_14020 b1009caa52afc60349637d4196cc7997 286 Gene3D G3DSA:3.40.190.10 139 229 5.8E-76 T 12-10-2018 ABD1_16250 15980624db75508a722009ebcbd73eee 263 SUPERFAMILY SSF51182 40 75 6.32E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_16250 15980624db75508a722009ebcbd73eee 263 Gene3D G3DSA:1.10.10.60 202 260 2.4E-5 T 12-10-2018 ABD1_16250 15980624db75508a722009ebcbd73eee 263 Pfam PF12852 Cupin 2 190 3.1E-27 T 12-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain ABD1_08180 6eca4b1048f71d0ba21f230ae4b6704c 151 Pfam PF00583 Acetyltransferase (GNAT) family 15 116 1.4E-15 T 12-10-2018 IPR000182 GNAT domain ABD1_08180 6eca4b1048f71d0ba21f230ae4b6704c 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 139 6.4E-37 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 ABD1_08180 6eca4b1048f71d0ba21f230ae4b6704c 151 Gene3D G3DSA:3.40.630.30 1 148 1.7E-40 T 12-10-2018 ABD1_08180 6eca4b1048f71d0ba21f230ae4b6704c 151 SUPERFAMILY SSF55729 1 142 1.74E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 6.7E-4 T 12-10-2018 ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 Gene3D G3DSA:3.40.50.720 1 256 2.1E-77 T 12-10-2018 ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.3E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 SUPERFAMILY SSF51735 3 251 5.11E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 Pfam PF00106 short chain dehydrogenase 6 204 7.9E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_21480 18d06dae20c6a031d2290e13e9086b87 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_15620 533ac99567b3c8ea15ee6d2fc061cfc3 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 1.7E-32 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABD1_02430 6974c03f94f126b051597ddffe95ebcb 379 Pfam PF06580 Histidine kinase 187 264 1.8E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ABD1_02430 6974c03f94f126b051597ddffe95ebcb 379 SUPERFAMILY SSF55874 240 355 1.77E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_02430 6974c03f94f126b051597ddffe95ebcb 379 Gene3D G3DSA:3.30.565.10 240 371 5.8E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABD1_17460 e414d7ee769b207623935e36baeb9050 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 253 3.1E-51 T 12-10-2018 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 SUPERFAMILY SSF51735 4 254 5.72E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABD1_17460 e414d7ee769b207623935e36baeb9050 256 Gene3D G3DSA:3.40.50.720 2 255 1.3E-63 T 12-10-2018 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 9 26 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_17460 e414d7ee769b207623935e36baeb9050 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 4.3E-45 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABD1_30020 5e9bbfb6082e9a7009d82acc5ff10787 265 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 8 261 1.0E-77 T 12-10-2018 IPR023875 DNA metabolism protein, putative ABD1_30020 5e9bbfb6082e9a7009d82acc5ff10787 265 Pfam PF13566 Domain of unknown function (DUF4130 89 260 7.5E-48 T 12-10-2018 IPR025404 Domain of unknown function DUF4130 ABD1_29480 68eee1853237098482299234a0f29593 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.9E-18 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ABD1_29480 68eee1853237098482299234a0f29593 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.409 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29480 68eee1853237098482299234a0f29593 58 PIRSF PIRSF002211 1 58 6.1E-25 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29480 68eee1853237098482299234a0f29593 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.6E-20 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_29480 68eee1853237098482299234a0f29593 58 SUPERFAMILY SSF55129 1 58 1.05E-20 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ABD1_29480 68eee1853237098482299234a0f29593 58 Gene3D G3DSA:3.30.1390.20 1 58 1.0E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ABD1_30550 38f7d3d323e5efece8e025ef7718baef 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 1.0E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABD1_30550 38f7d3d323e5efece8e025ef7718baef 184 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 144 3.2E-21 T 12-10-2018 IPR013362 Pilus modification type IV, PilV ABD1_26590 49ed649dfab2c8b39ef8bc05309c8358 161 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 6.1E-15 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 ABD1_20430 d6e7aeead5d4dc0031b4a4610af53326 557 Pfam PF01645 Conserved region in glutamate synthase 181 497 2.8E-88 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABD1_20430 d6e7aeead5d4dc0031b4a4610af53326 557 PIRSF PIRSF006429 33 557 2.3E-162 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein ABD1_20430 d6e7aeead5d4dc0031b4a4610af53326 557 Gene3D G3DSA:3.20.20.70 119 530 1.4E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_20430 d6e7aeead5d4dc0031b4a4610af53326 557 PIRSF PIRSF500060 34 557 2.1E-230 T 12-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria ABD1_20430 d6e7aeead5d4dc0031b4a4610af53326 557 SUPERFAMILY SSF51395 37 526 1.31E-133 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Pfam PF13533 Biotin-lipoyl like 73 120 4.0E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 350 7.9E-55 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Pfam PF13437 HlyD family secretion protein 183 273 4.2E-18 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Gene3D G3DSA:2.40.420.20 50 350 6.6E-50 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Gene3D G3DSA:2.40.50.100 72 212 6.6E-50 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Gene3D G3DSA:2.40.30.170 60 292 6.6E-50 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 SUPERFAMILY SSF111369 61 242 3.01E-21 T 12-10-2018 ABD1_27620 a2fa0bb7a1183840949a427657491e1b 372 Gene3D G3DSA:1.10.287.470 110 176 6.6E-50 T 12-10-2018 ABD1_06710 8811ae83dd945609f492e65e5f682e0c 177 Pfam PF04982 HPP family 46 166 2.7E-39 T 12-10-2018 IPR007065 HPP ABD1_27580 29834b15e58265de4e68d061d9144f56 178 SMART SM00260 27 164 2.3E-6 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABD1_27580 29834b15e58265de4e68d061d9144f56 178 SUPERFAMILY SSF50341 27 168 6.28E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABD1_27580 29834b15e58265de4e68d061d9144f56 178 Gene3D G3DSA:2.30.30.40 34 153 2.3E-21 T 12-10-2018 ABD1_27580 29834b15e58265de4e68d061d9144f56 178 Gene3D G3DSA:2.40.50.180 50 116 2.3E-21 T 12-10-2018 ABD1_27580 29834b15e58265de4e68d061d9144f56 178 Pfam PF01584 CheW-like domain 33 152 2.4E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABD1_13360 c4ec31bfe72a725320d59fca5f03d03e 367 Gene3D G3DSA:3.30.9.10 81 305 2.7E-72 T 12-10-2018 ABD1_13360 c4ec31bfe72a725320d59fca5f03d03e 367 SUPERFAMILY SSF51905 3 364 8.16E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_13360 c4ec31bfe72a725320d59fca5f03d03e 367 SUPERFAMILY SSF54373 245 306 6.02E-13 T 12-10-2018 ABD1_13360 c4ec31bfe72a725320d59fca5f03d03e 367 Gene3D G3DSA:3.50.50.60 4 345 2.7E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_13360 c4ec31bfe72a725320d59fca5f03d03e 367 Pfam PF01266 FAD dependent oxidoreductase 4 344 7.1E-62 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 SUPERFAMILY SSF46785 1 83 2.27E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 SUPERFAMILY SSF53850 62 266 5.25E-41 T 12-10-2018 ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 35 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 Gene3D G3DSA:3.40.190.10 63 264 9.2E-61 T 12-10-2018 ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 Gene3D G3DSA:1.10.10.10 1 62 2.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 Gene3D G3DSA:3.40.190.10 135 236 9.2E-61 T 12-10-2018 ABD1_13790 ad316927e5927f60514d864c4cb2951f 269 Pfam PF03466 LysR substrate binding domain 61 266 3.8E-39 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_20150 cffeb5bf9d3320968cba71316c214a5e 122 SUPERFAMILY SSF75169 1 122 2.49E-29 T 12-10-2018 IPR027396 DsrEFH-like ABD1_20150 cffeb5bf9d3320968cba71316c214a5e 122 Pfam PF02635 DsrE/DsrF-like family 1 122 1.6E-21 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein ABD1_20150 cffeb5bf9d3320968cba71316c214a5e 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 1.5E-35 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 ABD1_20150 cffeb5bf9d3320968cba71316c214a5e 122 Gene3D G3DSA:3.40.1260.10 1 122 4.6E-36 T 12-10-2018 IPR027396 DsrEFH-like ABD1_19290 5fbaec13fed6285499e22f1e7eba9d8f 120 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 17 115 2.0E-34 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ABD1_19290 5fbaec13fed6285499e22f1e7eba9d8f 120 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 12 116 21.813 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ABD1_13460 f58a9304ced3936f3f8336cc361e9b2d 96 PIRSF PIRSF030200 1 96 3.6E-42 T 12-10-2018 IPR009359 Phenylacetic acid degradation B ABD1_13460 f58a9304ced3936f3f8336cc361e9b2d 96 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 7 96 1.9E-45 T 12-10-2018 IPR009359 Phenylacetic acid degradation B ABD1_13460 f58a9304ced3936f3f8336cc361e9b2d 96 Pfam PF06243 Phenylacetic acid degradation B 6 92 1.3E-37 T 12-10-2018 IPR009359 Phenylacetic acid degradation B ABD1_13460 f58a9304ced3936f3f8336cc361e9b2d 96 Gene3D G3DSA:3.10.20.520 2 66 1.8E-29 T 12-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B ABD1_33140 e8cc949495045d1074a792589f42e19e 389 Pfam PF00324 Amino acid permease 11 378 2.1E-83 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_33140 e8cc949495045d1074a792589f42e19e 389 Gene3D G3DSA:1.20.1740.10 5 388 2.9E-46 T 12-10-2018 ABD1_33140 e8cc949495045d1074a792589f42e19e 389 PIRSF PIRSF006060 7 387 8.7E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_14170 dffa25d4829497e32039d94c444ea2b6 229 Pfam PF04172 LrgB-like family 12 224 8.5E-66 T 12-10-2018 IPR007300 CidB/LrgB family ABD1_16310 3d9f4f61b9832b8d9a1c870325b1995a 154 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 152 2.5E-58 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABD1_16310 3d9f4f61b9832b8d9a1c870325b1995a 154 Gene3D G3DSA:3.90.960.10 1 154 2.2E-59 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABD1_16310 3d9f4f61b9832b8d9a1c870325b1995a 154 PIRSF PIRSF006181 1 154 7.2E-58 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABD1_16310 3d9f4f61b9832b8d9a1c870325b1995a 154 SUPERFAMILY SSF55826 2 152 1.57E-45 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABD1_16310 3d9f4f61b9832b8d9a1c870325b1995a 154 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 3.6E-27 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABD1_01830 23b0bf599ce3455b141ca265f412f837 117 Gene3D G3DSA:3.30.1330.40 1 117 2.2E-39 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_01830 23b0bf599ce3455b141ca265f412f837 117 SUPERFAMILY SSF55298 10 117 1.73E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_01830 23b0bf599ce3455b141ca265f412f837 117 Pfam PF01042 Endoribonuclease L-PSP 4 115 1.9E-27 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABD1_06820 a43609dace86cf369f8ea563a4d46554 328 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 9.1E-189 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 ABD1_06820 a43609dace86cf369f8ea563a4d46554 328 PIRSF PIRSF034367 1 327 3.5E-200 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 ABD1_02540 00c9adb4e370d7a7cf762ce405031585 209 SMART SM00240 22 72 2.4E-11 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ABD1_02540 00c9adb4e370d7a7cf762ce405031585 209 SUPERFAMILY SSF49879 2 104 7.08E-25 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ABD1_02540 00c9adb4e370d7a7cf762ce405031585 209 Pfam PF00498 FHA domain 24 86 1.4E-18 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ABD1_02540 00c9adb4e370d7a7cf762ce405031585 209 Gene3D G3DSA:2.60.200.20 1 105 3.1E-25 T 12-10-2018 ABD1_20490 c9178bb4b55e60c1ca62e0ddcb2338d8 385 Gene3D G3DSA:1.20.1090.10 186 384 6.2E-60 T 12-10-2018 ABD1_20490 c9178bb4b55e60c1ca62e0ddcb2338d8 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 4.3E-110 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABD1_20490 c9178bb4b55e60c1ca62e0ddcb2338d8 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABD1_20490 c9178bb4b55e60c1ca62e0ddcb2338d8 385 Gene3D G3DSA:3.40.50.1970 1 185 8.8E-51 T 12-10-2018 ABD1_20490 c9178bb4b55e60c1ca62e0ddcb2338d8 385 SUPERFAMILY SSF56796 2 384 2.36E-116 T 12-10-2018 ABD1_31570 fa549f1aa28a1266812268474259a6a4 205 Gene3D G3DSA:1.10.10.60 3 70 8.3E-18 T 12-10-2018 ABD1_31570 fa549f1aa28a1266812268474259a6a4 205 SUPERFAMILY SSF48498 102 197 1.45E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_31570 fa549f1aa28a1266812268474259a6a4 205 Gene3D G3DSA:1.10.357.10 74 203 4.3E-16 T 12-10-2018 ABD1_31570 fa549f1aa28a1266812268474259a6a4 205 SUPERFAMILY SSF46689 4 79 5.08E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_26780 6f74c26a654a4777310b7232166a9919 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_26780 6f74c26a654a4777310b7232166a9919 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 9.2E-42 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26780 6f74c26a654a4777310b7232166a9919 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26780 6f74c26a654a4777310b7232166a9919 103 SUPERFAMILY SSF141091 1 101 1.83E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_26780 6f74c26a654a4777310b7232166a9919 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.256 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_22540 c765478b7be53e8c012294eb78e5074d 191 Pfam PF00881 Nitroreductase family 13 168 7.2E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_22540 c765478b7be53e8c012294eb78e5074d 191 Gene3D G3DSA:3.40.109.10 9 188 7.3E-36 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_22540 c765478b7be53e8c012294eb78e5074d 191 PIRSF PIRSF000232 5 191 9.0E-64 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ABD1_22540 c765478b7be53e8c012294eb78e5074d 191 SUPERFAMILY SSF55469 11 187 4.58E-30 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_06050 909b430c80bbaf31ce75514f053a15f2 95 Pfam PF00583 Acetyltransferase (GNAT) family 3 70 1.5E-8 T 12-10-2018 IPR000182 GNAT domain ABD1_06050 909b430c80bbaf31ce75514f053a15f2 95 SUPERFAMILY SSF55729 3 95 6.0E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_06050 909b430c80bbaf31ce75514f053a15f2 95 Gene3D G3DSA:3.40.630.30 1 95 2.0E-14 T 12-10-2018 ABD1_02710 ef235561e9640f0ff78944e9a2c9ddc9 196 SUPERFAMILY SSF56925 19 196 1.67E-20 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABD1_02710 ef235561e9640f0ff78944e9a2c9ddc9 196 Gene3D G3DSA:2.40.160.20 18 196 1.1E-36 T 12-10-2018 ABD1_02710 ef235561e9640f0ff78944e9a2c9ddc9 196 Pfam PF03922 OmpW family 19 196 2.1E-31 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF04052 TolB amino-terminal domain 30 123 6.0E-20 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 10 423 42.088 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Gene3D G3DSA:2.120.10.30 160 426 3.5E-83 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Gene3D G3DSA:3.40.50.10070 25 159 3.2E-32 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 SUPERFAMILY SSF69304 149 425 3.66E-55 T 12-10-2018 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 369 393 0.0016 T 12-10-2018 IPR011659 WD40-like Beta Propeller ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 200 223 0.0084 T 12-10-2018 IPR011659 WD40-like Beta Propeller ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 277 312 1.0E-11 T 12-10-2018 IPR011659 WD40-like Beta Propeller ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 235 268 2.3E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 SUPERFAMILY SSF52964 38 156 3.14E-27 T 12-10-2018 ABD1_25460 54ef8da84da07fe0369a8c7721bc83b7 426 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 23 423 1.9E-150 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 ABD1_27680 98d606d633b177988dc7020d440b7c9b 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 142 6.7E-26 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ABD1_27680 98d606d633b177988dc7020d440b7c9b 149 SUPERFAMILY SSF55961 3 144 2.65E-43 T 12-10-2018 ABD1_27680 98d606d633b177988dc7020d440b7c9b 149 Gene3D G3DSA:3.30.530.20 3 148 6.4E-39 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_31220 0ad456eca1a3037f95021635e69f73c5 209 Pfam PF00313 'Cold-shock' DNA-binding domain 8 42 6.0E-8 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABD1_31220 0ad456eca1a3037f95021635e69f73c5 209 Gene3D G3DSA:2.40.50.140 2 77 3.2E-12 T 12-10-2018 ABD1_31220 0ad456eca1a3037f95021635e69f73c5 209 SUPERFAMILY SSF50249 8 70 2.69E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_31220 0ad456eca1a3037f95021635e69f73c5 209 Pfam PF06961 Protein of unknown function (DUF1294) 127 181 1.2E-20 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 ABD1_31220 0ad456eca1a3037f95021635e69f73c5 209 SMART SM00357 5 69 0.0062 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 Gene3D G3DSA:3.30.300.30 440 548 1.7E-29 T 12-10-2018 ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 SUPERFAMILY SSF56801 27 542 8.9E-138 T 12-10-2018 ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 Pfam PF00501 AMP-binding enzyme 40 443 1.0E-76 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 8.5E-23 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABD1_01050 a6c48bbee125cd493bdd0db47f81e603 549 Gene3D G3DSA:3.40.50.12780 19 439 1.9E-96 T 12-10-2018 ABD1_14990 8898574b0702c388a5542e412d4860aa 269 SMART SM01236 93 205 3.5E-13 T 12-10-2018 ABD1_14990 8898574b0702c388a5542e412d4860aa 269 SUPERFAMILY SSF48613 16 254 1.56E-13 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_14990 8898574b0702c388a5542e412d4860aa 269 Gene3D G3DSA:1.20.910.10 11 263 2.9E-29 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_19150 f2683b97037724e641e1f8e7c1d0b293 116 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 86 26.063 T 12-10-2018 IPR023081 Cell division protein FtsB ABD1_19150 f2683b97037724e641e1f8e7c1d0b293 116 Pfam PF04977 Septum formation initiator 7 84 1.6E-23 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 SUPERFAMILY SSF51905 6 346 5.11E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.1E-12 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.1E-12 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 8.1E-12 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 8.1E-12 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.0E-6 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.0E-6 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-6 T 12-10-2018 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 337 2.8E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABD1_24700 ebb4a8d2f904119ecdb9b45917d8926f 428 Gene3D G3DSA:3.50.50.100 1 409 1.2E-109 T 12-10-2018 ABD1_30270 c2063b23167a6afd997eb26d36d9e7c0 155 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 35 150 5.5E-26 T 12-10-2018 IPR019287 Holliday junction resolvase-related domain ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 SUPERFAMILY SSF55194 1 184 4.06E-65 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 6.8E-64 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 Pfam PF01765 Ribosome recycling factor 21 182 3.8E-58 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 25.201 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 Gene3D G3DSA:3.30.1360.40 31 104 5.0E-61 T 12-10-2018 ABD1_20000 c12e97f3e2797031fcd5547bc7c5d7af 184 Gene3D G3DSA:1.10.132.20 12 181 5.0E-61 T 12-10-2018 ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 Pfam PF03466 LysR substrate binding domain 84 265 4.7E-25 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 SUPERFAMILY SSF53850 85 285 7.06E-30 T 12-10-2018 ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 Gene3D G3DSA:1.10.10.10 1 87 8.8E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 Gene3D G3DSA:3.40.190.290 89 270 2.9E-29 T 12-10-2018 ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 SUPERFAMILY SSF46785 1 105 3.77E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_06930 79f0ce2b65e7623fa1b08b741eb13aad 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 3.0E-68 T 12-10-2018 IPR009906 D-glutamate cyclase ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 PIRSF PIRSF029755 3 268 4.9E-117 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 Hamap MF_01830 Putative hydro-lyase . 14 268 51.206 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 Gene3D G3DSA:3.30.2040.10 128 240 3.7E-92 T 12-10-2018 ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 Gene3D G3DSA:3.40.1640.10 23 256 3.7E-92 T 12-10-2018 ABD1_12930 6d9fead9512236bf4c064d26033c6bc2 268 SUPERFAMILY SSF160920 15 261 4.97E-109 T 12-10-2018 IPR038021 Putative hydro-lyase ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 SUPERFAMILY SSF103473 16 432 1.02E-62 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 Gene3D G3DSA:1.20.1250.20 16 435 2.1E-63 T 12-10-2018 ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 316 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 418 1.3E-137 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 Pfam PF00083 Sugar (and other) transporter 258 431 4.2E-7 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_28040 f2455e640f30eeb3033d48ba20c4a70a 436 Pfam PF00083 Sugar (and other) transporter 22 228 1.6E-23 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_22250 3cb19b6b56194b597198dacec4ad4044 156 Gene3D G3DSA:3.30.70.100 2 128 9.0E-33 T 12-10-2018 ABD1_22250 3cb19b6b56194b597198dacec4ad4044 156 SMART SM01034 3 96 5.5E-34 T 12-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 ABD1_22250 3cb19b6b56194b597198dacec4ad4044 156 Pfam PF04940 Sensors of blue-light using FAD 4 95 3.5E-27 T 12-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 ABD1_22250 3cb19b6b56194b597198dacec4ad4044 156 SUPERFAMILY SSF54975 1 132 1.08E-36 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ABD1_19220 216de09fdff0f60d314b42f6974aeb25 364 Pfam PF12146 Serine aminopeptidase, S33 106 340 3.5E-7 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_19220 216de09fdff0f60d314b42f6974aeb25 364 SUPERFAMILY SSF53474 83 358 9.88E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_19220 216de09fdff0f60d314b42f6974aeb25 364 PIRSF PIRSF005211 2 364 3.5E-58 T 12-10-2018 IPR012020 AB hydrolase 4 family ABD1_19220 216de09fdff0f60d314b42f6974aeb25 364 Gene3D G3DSA:3.40.50.1820 87 356 2.9E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_04780 01a398d0a37b2884d5b5261deb99dc85 204 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 17 178 5.4E-43 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABD1_28220 be00a96c4e269df8fdb76c5ec07535e7 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 231 1.2E-30 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABD1_28220 be00a96c4e269df8fdb76c5ec07535e7 237 Gene3D G3DSA:3.20.20.190 2 228 5.6E-53 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABD1_28220 be00a96c4e269df8fdb76c5ec07535e7 237 SUPERFAMILY SSF51695 1 236 6.8E-52 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABD1_23330 9a4347fc8e78dc24f36f1f6aad88889d 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 7.4E-23 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABD1_23330 9a4347fc8e78dc24f36f1f6aad88889d 127 Gene3D G3DSA:1.20.1290.10 3 126 5.6E-37 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_23330 9a4347fc8e78dc24f36f1f6aad88889d 127 SUPERFAMILY SSF69118 4 123 2.49E-34 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABD1_27070 77fa064b5269d3d68a40833729b01e5b 303 SUPERFAMILY SSF48576 11 288 2.7E-77 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABD1_27070 77fa064b5269d3d68a40833729b01e5b 303 Gene3D G3DSA:1.10.600.10 6 300 5.7E-88 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABD1_27070 77fa064b5269d3d68a40833729b01e5b 303 Pfam PF00348 Polyprenyl synthetase 36 271 1.3E-56 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABD1_27070 77fa064b5269d3d68a40833729b01e5b 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABD1_16320 ce62294dcf8f6f88eeeb6545d361ecd9 594 Pfam PF04183 IucA / IucC family 145 377 3.9E-51 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ABD1_16320 ce62294dcf8f6f88eeeb6545d361ecd9 594 Gene3D G3DSA:1.10.510.40 369 561 2.0E-12 T 12-10-2018 ABD1_16320 ce62294dcf8f6f88eeeb6545d361ecd9 594 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 567 2.0E-34 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 Pfam PF04055 Radical SAM superfamily 15 185 7.1E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 Gene3D G3DSA:3.80.30.20 2 311 5.9E-93 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 SUPERFAMILY SSF102114 10 384 4.19E-102 T 12-10-2018 ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 375 6.5E-115 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 Pfam PF06969 HemN C-terminal domain 312 372 2.0E-12 T 12-10-2018 IPR010723 HemN, C-terminal ABD1_03670 ccb2f4088fec9e30c44f00f7e7c5cfbc 384 SMART SM00729 10 230 1.1E-50 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_25330 81f5db4ea7087844e422d12c48bf0168 266 SUPERFAMILY SSF52096 9 264 6.82E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_25330 81f5db4ea7087844e422d12c48bf0168 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 7.3E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_25330 81f5db4ea7087844e422d12c48bf0168 266 Gene3D G3DSA:3.90.226.10 10 192 1.5E-63 T 12-10-2018 ABD1_25330 81f5db4ea7087844e422d12c48bf0168 266 Gene3D G3DSA:1.10.12.10 210 255 4.0E-32 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_28470 484b02421e017dfabb63e581da972cb3 296 Pfam PF06258 Mitochondrial fission ELM1 11 292 6.1E-56 T 12-10-2018 IPR009367 Mitochondrial fission protein ELM1-like ABD1_14440 3799f54cf8a9263717ad82c6f64bc41e 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 284 6.7E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_14440 3799f54cf8a9263717ad82c6f64bc41e 289 SUPERFAMILY SSF161098 89 274 1.16E-37 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_14440 3799f54cf8a9263717ad82c6f64bc41e 289 Gene3D G3DSA:1.10.3720.10 84 281 2.9E-31 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 148 4.1E-11 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 SUPERFAMILY SSF56935 32 686 5.5E-88 T 12-10-2018 ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 Gene3D G3DSA:2.170.130.10 38 159 2.0E-25 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 669 686 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 Pfam PF00593 TonB dependent receptor 310 684 5.9E-35 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_28350 0db4d4a048d733bcc9651c791e4fc7cf 686 Gene3D G3DSA:2.40.170.20 161 686 1.7E-56 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_20400 a71b9ab295e91ab8aa214cac57c20bea 269 SMART SM01236 93 205 1.6E-13 T 12-10-2018 ABD1_20400 a71b9ab295e91ab8aa214cac57c20bea 269 SUPERFAMILY SSF48613 15 255 4.78E-8 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_20400 a71b9ab295e91ab8aa214cac57c20bea 269 Pfam PF14518 Iron-containing redox enzyme 115 234 2.2E-7 T 12-10-2018 ABD1_20400 a71b9ab295e91ab8aa214cac57c20bea 269 Gene3D G3DSA:1.20.910.10 11 261 2.5E-24 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABD1_05800 6d9510c7351add13f10f83882117e4c3 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABD1_05800 6d9510c7351add13f10f83882117e4c3 262 Gene3D G3DSA:3.90.226.10 2 249 2.0E-65 T 12-10-2018 ABD1_05800 6d9510c7351add13f10f83882117e4c3 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 220 2.0E-41 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_05800 6d9510c7351add13f10f83882117e4c3 262 SUPERFAMILY SSF52096 3 243 5.6E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_05460 1e1b2fe6c11c5e30b24fee8f58a70a81 437 SUPERFAMILY SSF103473 1 417 3.79E-65 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_05460 1e1b2fe6c11c5e30b24fee8f58a70a81 437 Pfam PF07690 Major Facilitator Superfamily 14 355 2.3E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_05460 1e1b2fe6c11c5e30b24fee8f58a70a81 437 Gene3D G3DSA:1.20.1250.20 6 432 9.0E-60 T 12-10-2018 ABD1_11910 3a40356ec886a195273d5181e8008d42 349 Pfam PF00248 Aldo/keto reductase family 15 340 8.4E-69 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABD1_11910 3a40356ec886a195273d5181e8008d42 349 Gene3D G3DSA:3.20.20.100 1 349 1.0E-123 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_11910 3a40356ec886a195273d5181e8008d42 349 SUPERFAMILY SSF51430 1 347 1.96E-105 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABD1_11910 3a40356ec886a195273d5181e8008d42 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 2.3E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_11910 3a40356ec886a195273d5181e8008d42 349 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.3E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABD1_26420 00c8380ecf0126cfe029be4f1d2e33d3 105 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 89 3.1E-24 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABD1_26420 00c8380ecf0126cfe029be4f1d2e33d3 105 SUPERFAMILY SSF46767 7 90 3.53E-24 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABD1_26420 00c8380ecf0126cfe029be4f1d2e33d3 105 Gene3D G3DSA:1.10.10.10 5 105 2.9E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_01670 2ea9c275e6eee65ec17d16229fd30435 384 SUPERFAMILY SSF54106 55 103 8.89E-7 T 12-10-2018 ABD1_01670 2ea9c275e6eee65ec17d16229fd30435 384 Pfam PF01476 LysM domain 57 102 7.7E-13 T 12-10-2018 IPR018392 LysM domain ABD1_01670 2ea9c275e6eee65ec17d16229fd30435 384 Gene3D G3DSA:3.10.350.10 56 101 3.0E-12 T 12-10-2018 IPR036779 LysM domain superfamily ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 Pfam PF13360 PQQ-like domain 78 309 1.9E-37 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 380 26.708 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 379 1.1E-108 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SUPERFAMILY SSF50998 46 367 1.96E-58 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 143 175 0.15 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 189 221 24.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 279 310 2.6E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 103 135 4.4E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 241 272 99.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 SMART SM00564 320 351 1.7 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ABD1_04760 111da54bdae55a67bb638469f9bb8516 381 Gene3D G3DSA:2.130.10.10 46 380 9.4E-79 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABD1_31940 25a9b2c36a69e02a27dcca12dc5db7d8 230 SUPERFAMILY SSF81324 112 216 8.11E-11 T 12-10-2018 ABD1_31940 25a9b2c36a69e02a27dcca12dc5db7d8 230 Pfam PF07885 Ion channel 131 215 1.4E-5 T 12-10-2018 IPR013099 Potassium channel domain ABD1_31940 25a9b2c36a69e02a27dcca12dc5db7d8 230 Gene3D G3DSA:1.10.287.70 113 221 3.5E-10 T 12-10-2018 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 SUPERFAMILY SSF53335 141 433 2.13E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 145 233 1.1E-6 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Gene3D G3DSA:1.10.940.10 8 144 1.1E-32 T 12-10-2018 IPR035926 NusB-like superfamily ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 SUPERFAMILY SSF48013 12 149 1.8E-26 T 12-10-2018 IPR035926 NusB-like superfamily ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 430 1.4E-54 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Gene3D G3DSA:3.40.50.150 231 433 1.1E-55 T 12-10-2018 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Pfam PF01029 NusB family 13 130 7.8E-16 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 Gene3D G3DSA:3.30.70.1170 173 230 1.0E-18 T 12-10-2018 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 17 432 1.6E-113 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 4.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 4.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 4.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 415 432 4.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABD1_33600 49bfbbc28f8878b3d561baf3b526637a 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 4.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 Pfam PF02358 Trehalose-phosphatase 36 245 1.1E-31 T 12-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 Gene3D G3DSA:3.40.50.1000 35 247 1.0E-44 T 12-10-2018 IPR023214 HAD superfamily ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 SUPERFAMILY SSF56784 35 261 2.3E-39 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 Gene3D G3DSA:3.30.70.1020 115 188 1.0E-44 T 12-10-2018 ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 31 257 1.4E-37 T 12-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ABD1_07600 b46160037bd209e533581b3bab70fbc2 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 35 223 1.5E-22 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABD1_14970 a67833ba6639eb89b96978828400036e 181 SMART SM00563 29 145 1.3E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_14970 a67833ba6639eb89b96978828400036e 181 SUPERFAMILY SSF69593 26 141 1.83E-15 T 12-10-2018 ABD1_14970 a67833ba6639eb89b96978828400036e 181 Pfam PF01553 Acyltransferase 25 138 3.8E-13 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_02910 fb5f058b7a43e01bb5f86ac81ceecb91 203 Gene3D G3DSA:2.60.120.590 19 202 1.7E-57 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily ABD1_02910 fb5f058b7a43e01bb5f86ac81ceecb91 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 28 198 3.7E-30 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ABD1_02910 fb5f058b7a43e01bb5f86ac81ceecb91 203 SUPERFAMILY SSF51197 6 200 2.38E-58 T 12-10-2018 ABD1_24050 3430ca27a799d4934c31565ed9733552 288 Gene3D G3DSA:1.10.10.10 4 75 2.4E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24050 3430ca27a799d4934c31565ed9733552 288 Pfam PF08223 PaaX-like protein C-terminal domain 171 257 4.8E-5 T 12-10-2018 IPR013225 PaaX-like, C-terminal ABD1_24050 3430ca27a799d4934c31565ed9733552 288 Pfam PF07848 PaaX-like protein 8 69 2.5E-9 T 12-10-2018 IPR012906 PaaX-like, N-terminal ABD1_02200 4711fff218b23268ad75321c6673ea01 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 6.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 Gene3D G3DSA:3.40.50.12740 2 209 4.5E-62 T 12-10-2018 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 Pfam PF00072 Response regulator receiver domain 4 116 4.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 SMART SM00448 2 115 7.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 SMART SM00421 146 203 3.9E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABD1_02200 4711fff218b23268ad75321c6673ea01 211 SUPERFAMILY SSF52172 3 176 1.76E-34 T 12-10-2018 IPR011006 CheY-like superfamily ABD1_27870 afa30ba439e1f3bab4671702509dfd05 138 Pfam PF12019 Type II transport protein GspH 17 113 2.3E-8 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ABD1_26000 4a2211819d2a408e327192190d7f22c6 287 PIRSF PIRSF007580 1 280 2.4E-51 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_26000 4a2211819d2a408e327192190d7f22c6 287 Pfam PF10118 Predicted metal-dependent hydrolase 14 260 1.7E-58 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 SUPERFAMILY SSF46689 198 246 2.94E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 Pfam PF12833 Helix-turn-helix domain 219 293 7.8E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 Gene3D G3DSA:1.10.10.60 248 296 5.5E-13 T 12-10-2018 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 Gene3D G3DSA:1.10.10.60 194 247 3.9E-11 T 12-10-2018 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 SMART SM00342 213 296 3.1E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 SUPERFAMILY SSF46689 250 293 8.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_27130 b9d845f4863c579901c2fa405013a4a4 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 183 1.8E-32 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal ABD1_31350 df0a60280c578ab95af043c8688b260c 113 SUPERFAMILY SSF51182 25 96 1.9E-9 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily ABD1_31350 df0a60280c578ab95af043c8688b260c 113 Gene3D G3DSA:2.60.120.10 14 113 8.3E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold ABD1_10960 81d420bb155e4a916b353eea4eb37d16 481 Pfam PF01266 FAD dependent oxidoreductase 74 428 3.6E-46 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABD1_10960 81d420bb155e4a916b353eea4eb37d16 481 Gene3D G3DSA:3.50.50.60 74 428 2.9E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10960 81d420bb155e4a916b353eea4eb37d16 481 SUPERFAMILY SSF51905 72 364 1.23E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_10960 81d420bb155e4a916b353eea4eb37d16 481 Gene3D G3DSA:3.30.9.10 168 390 2.9E-57 T 12-10-2018 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.6E-18 T 12-10-2018 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.6E-18 T 12-10-2018 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.6E-18 T 12-10-2018 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 138 15.138 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 5.7E-20 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ABD1_04370 4a855e0bb8eb0a47a176a10b02372cc2 145 Pfam PF02416 mttA/Hcf106 family 4 52 1.8E-7 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 2.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 Pfam PF03466 LysR substrate binding domain 88 286 2.6E-34 T 12-10-2018 IPR005119 LysR, substrate-binding ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 Gene3D G3DSA:3.40.190.290 91 291 3.2E-32 T 12-10-2018 ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 Gene3D G3DSA:1.10.10.10 1 80 3.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 SUPERFAMILY SSF46785 3 110 7.26E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_24610 27ae9b3388f4a2be6b116220c227f971 293 SUPERFAMILY SSF53850 88 288 1.14E-35 T 12-10-2018 ABD1_16390 5ee9f9182a2136c9563d62490ac448fe 772 Gene3D G3DSA:2.170.130.10 65 187 4.7E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_16390 5ee9f9182a2136c9563d62490ac448fe 772 Gene3D G3DSA:2.40.170.20 217 772 2.1E-58 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_16390 5ee9f9182a2136c9563d62490ac448fe 772 SUPERFAMILY SSF56935 58 772 7.69E-96 T 12-10-2018 ABD1_16390 5ee9f9182a2136c9563d62490ac448fe 772 Pfam PF00593 TonB dependent receptor 276 771 3.6E-38 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_16390 5ee9f9182a2136c9563d62490ac448fe 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 182 1.5E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_08940 a151d5089400e6c808b592213b81d2f7 262 Gene3D G3DSA:1.10.12.10 205 262 2.3E-19 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABD1_08940 a151d5089400e6c808b592213b81d2f7 262 SUPERFAMILY SSF52096 7 261 9.36E-64 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABD1_08940 a151d5089400e6c808b592213b81d2f7 262 Gene3D G3DSA:3.90.226.10 2 204 1.6E-57 T 12-10-2018 ABD1_08940 a151d5089400e6c808b592213b81d2f7 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 2.4E-42 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABD1_12030 b02335cc396cd052f37cefe456e73cdb 411 SUPERFAMILY SSF51556 53 363 1.46E-71 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_12030 b02335cc396cd052f37cefe456e73cdb 411 SUPERFAMILY SSF51338 5 409 2.05E-11 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_12030 b02335cc396cd052f37cefe456e73cdb 411 Gene3D G3DSA:3.20.20.140 53 364 4.8E-84 T 12-10-2018 ABD1_12030 b02335cc396cd052f37cefe456e73cdb 411 Gene3D G3DSA:2.30.40.10 10 409 4.8E-84 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 Pfam PF00701 Dihydrodipicolinate synthetase family 3 289 1.8E-66 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 SMART SM01130 2 291 3.8E-94 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 Gene3D G3DSA:3.20.20.70 1 292 5.2E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 PIRSF PIRSF001365 1 292 2.7E-80 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 SUPERFAMILY SSF51569 1 290 1.0E-84 T 12-10-2018 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 2.1E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.1E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 2.1E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_01990 279b3569884200b496ccced0a8200b1e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 2.1E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 ABD1_30730 8b1422edf75106b51358b1480da2491e 291 Gene3D G3DSA:3.30.70.1070 84 182 4.5E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_01410 14c51d3d10fd136ff35d8ee6b9f0e258 208 Gene3D G3DSA:3.30.70.1070 127 207 5.4E-16 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_01410 14c51d3d10fd136ff35d8ee6b9f0e258 208 Pfam PF05036 Sporulation related domain 133 206 1.5E-17 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 ABD1_01410 14c51d3d10fd136ff35d8ee6b9f0e258 208 SUPERFAMILY SSF110997 131 206 3.79E-16 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABD1_12090 b386242db91d632fd19b76669af8afd6 203 SUPERFAMILY SSF52833 1 84 1.45E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_12090 b386242db91d632fd19b76669af8afd6 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 189 4.0E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_12090 b386242db91d632fd19b76669af8afd6 203 Gene3D G3DSA:1.20.1050.10 83 189 1.9E-59 T 12-10-2018 ABD1_12090 b386242db91d632fd19b76669af8afd6 203 SUPERFAMILY SSF47616 81 199 1.09E-21 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_12090 b386242db91d632fd19b76669af8afd6 203 Gene3D G3DSA:3.40.30.10 3 195 1.9E-59 T 12-10-2018 ABD1_12090 b386242db91d632fd19b76669af8afd6 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 2.0E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 4.3E-87 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 SUPERFAMILY SSF89360 14 110 7.26E-20 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 Pfam PF01106 NifU-like domain 127 198 1.2E-20 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 Gene3D G3DSA:3.30.300.130 121 210 1.6E-20 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABD1_09330 74820baf2d9a22f1680531d728b77546 212 SUPERFAMILY SSF117916 111 204 1.53E-21 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABD1_09330 74820baf2d9a22f1680531d728b77546 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 5.5E-8 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 Gene3D G3DSA:2.60.300.12 16 113 5.0E-9 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 3.0E-29 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABD1_09330 74820baf2d9a22f1680531d728b77546 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.737 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 ABD1_29020 22eea217f25beaa490832ae002f5f89d 187 Pfam PF14066 Protein of unknown function (DUF4256) 15 187 9.3E-88 T 12-10-2018 IPR025352 Protein of unknown function DUF4256 ABD1_05360 704442849f82a7f7414e0874b63aab96 401 Pfam PF11726 Inovirus Gp2 199 360 1.0E-11 T 12-10-2018 ABD1_21820 cadd159cbf007c35443965186f4874e7 301 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 298 1.0E-88 T 12-10-2018 ABD1_21820 cadd159cbf007c35443965186f4874e7 301 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.973 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABD1_21820 cadd159cbf007c35443965186f4874e7 301 PIRSF PIRSF000401 1 299 7.5E-85 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABD1_21820 cadd159cbf007c35443965186f4874e7 301 SUPERFAMILY SSF53335 63 290 4.33E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_21820 cadd159cbf007c35443965186f4874e7 301 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 1.8E-85 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABD1_21820 cadd159cbf007c35443965186f4874e7 301 Gene3D G3DSA:3.40.50.150 102 301 1.2E-54 T 12-10-2018 ABD1_12350 a5f347178fdbc894bd061b78951157a9 420 Pfam PF02601 Exonuclease VII, large subunit 137 362 1.4E-45 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ABD1_12350 a5f347178fdbc894bd061b78951157a9 420 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 413 1.2E-69 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ABD1_12350 a5f347178fdbc894bd061b78951157a9 420 Pfam PF13742 OB-fold nucleic acid binding domain 6 113 1.0E-13 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ABD1_14840 4b5849770ddf31c33d3e5f656ca566d7 277 Pfam PF03180 NLPA lipoprotein 39 270 3.4E-65 T 12-10-2018 IPR004872 Lipoprotein NlpA family ABD1_14840 4b5849770ddf31c33d3e5f656ca566d7 277 SUPERFAMILY SSF53850 39 272 2.24E-61 T 12-10-2018 ABD1_14840 4b5849770ddf31c33d3e5f656ca566d7 277 Gene3D G3DSA:3.40.190.10 40 256 5.0E-65 T 12-10-2018 ABD1_14840 4b5849770ddf31c33d3e5f656ca566d7 277 Gene3D G3DSA:3.40.190.10 118 223 5.0E-65 T 12-10-2018 ABD1_27220 dfebbf038eab35885d6536df9cf5bdef 461 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 448 3.4E-156 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 ABD1_27220 dfebbf038eab35885d6536df9cf5bdef 461 Pfam PF06974 Protein of unknown function (DUF1298) 302 445 1.9E-41 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 ABD1_27220 dfebbf038eab35885d6536df9cf5bdef 461 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 263 8.1E-68 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 ABD1_33800 8a6809ae47be8200332dce3a9b254572 115 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 112 7.3E-39 T 12-10-2018 IPR007437 Protein of unknown function DUF486 ABD1_33800 8a6809ae47be8200332dce3a9b254572 115 PIRSF PIRSF021239 1 115 4.5E-47 T 12-10-2018 IPR007437 Protein of unknown function DUF486 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 Gene3D G3DSA:3.40.390.30 1 158 5.3E-48 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 Pfam PF02130 Uncharacterized protein family UPF0054 22 150 5.1E-37 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 23.452 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 150 8.7E-35 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 SUPERFAMILY SSF55486 17 156 1.03E-44 T 12-10-2018 ABD1_29150 ac21544145171a4d8d10a47365af727b 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 138 4.9E-34 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 Pfam PF03652 Holliday junction resolvase 8 138 4.0E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 Gene3D G3DSA:3.30.420.140 5 140 3.0E-35 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 SMART SM00732 7 107 1.4E-25 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 SUPERFAMILY SSF53098 7 139 7.44E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_02950 3cd93e60056dfac96e6e389b277eca82 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 21.179 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 Gene3D G3DSA:3.30.70.1060 1 94 9.9E-37 T 12-10-2018 ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.6E-41 T 12-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 SUPERFAMILY SSF54909 1 95 1.23E-39 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 2.0E-27 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 3.0E-49 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 ABD1_18680 6746d3b4eeb617776d26f4866fcad8d6 96 PIRSF PIRSF001486 1 94 1.3E-49 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 ABD1_17840 6427804af111c518289f766b1ff2ca0a 146 Pfam PF13328 HD domain 11 92 5.3E-9 T 12-10-2018 IPR003607 HD/PDEase domain ABD1_17840 6427804af111c518289f766b1ff2ca0a 146 Gene3D G3DSA:1.10.3210.10 2 146 3.4E-21 T 12-10-2018 ABD1_17840 6427804af111c518289f766b1ff2ca0a 146 SUPERFAMILY SSF109604 4 138 5.96E-22 T 12-10-2018 ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 SUPERFAMILY SSF81901 3 114 1.14E-25 T 12-10-2018 ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 Gene3D G3DSA:1.25.40.10 1 126 1.4E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 Pfam PF08238 Sel1 repeat 7 35 0.0093 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 Pfam PF08238 Sel1 repeat 41 73 8.3E-8 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 Pfam PF08238 Sel1 repeat 75 109 2.9E-6 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 SMART SM00671 2 38 20.0 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 SMART SM00671 39 74 3.3E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_13610 f222b67a0b8524c259b3bc320429b2a5 127 SMART SM00671 75 110 1.5E-5 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_08410 da6a16bc85fad3d0092cc24f6c78e9b0 145 Gene3D G3DSA:1.10.10.10 2 84 1.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_08410 da6a16bc85fad3d0092cc24f6c78e9b0 145 SUPERFAMILY SSF46785 6 134 1.7E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_08410 da6a16bc85fad3d0092cc24f6c78e9b0 145 Gene3D G3DSA:3.30.1490.190 85 141 7.9E-24 T 12-10-2018 ABD1_08410 da6a16bc85fad3d0092cc24f6c78e9b0 145 Pfam PF01475 Ferric uptake regulator family 10 130 1.9E-45 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABD1_32060 1fc492b3294461a55a15153bb696d707 326 SUPERFAMILY SSF82689 213 310 4.05E-26 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABD1_32060 1fc492b3294461a55a15153bb696d707 326 SUPERFAMILY SSF50182 143 205 2.84E-16 T 12-10-2018 IPR010920 LSM domain superfamily ABD1_32060 1fc492b3294461a55a15153bb696d707 326 Gene3D G3DSA:3.30.70.100 210 304 1.3E-22 T 12-10-2018 ABD1_32060 1fc492b3294461a55a15153bb696d707 326 SUPERFAMILY SSF82861 57 142 1.7E-8 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABD1_32060 1fc492b3294461a55a15153bb696d707 326 Pfam PF00924 Mechanosensitive ion channel 105 300 1.1E-44 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABD1_32060 1fc492b3294461a55a15153bb696d707 326 Gene3D G3DSA:2.30.30.60 159 207 9.5E-15 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABD1_33540 324c2d0763c4172a9ec5c3509f468de7 431 Pfam PF00860 Permease family 30 399 3.6E-96 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABD1_33540 324c2d0763c4172a9ec5c3509f468de7 431 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 5.9E-110 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABD1_33310 291b44eabac63cd9cad5c18cbfb6eea1 152 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 2.6E-9 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein ABD1_33310 291b44eabac63cd9cad5c18cbfb6eea1 152 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 152 37.341 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 ABD1_33310 291b44eabac63cd9cad5c18cbfb6eea1 152 PIRSF PIRSF006173 3 152 2.7E-65 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 ABD1_31910 733836d264ce1b1445150b6c57b4d69f 568 SMART SM00267 399 567 1.4E-41 T 12-10-2018 IPR000160 GGDEF domain ABD1_31910 733836d264ce1b1445150b6c57b4d69f 568 SUPERFAMILY SSF55073 415 566 4.94E-38 T 12-10-2018 IPR029787 Nucleotide cyclase ABD1_31910 733836d264ce1b1445150b6c57b4d69f 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 410 564 1.6E-39 T 12-10-2018 IPR000160 GGDEF domain ABD1_31910 733836d264ce1b1445150b6c57b4d69f 568 Gene3D G3DSA:3.30.70.270 397 567 2.6E-46 T 12-10-2018 ABD1_31910 733836d264ce1b1445150b6c57b4d69f 568 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 567 1.4E-43 T 12-10-2018 IPR000160 GGDEF domain ABD1_06720 c15d15cd73662944ead6c5f75acc2790 377 SUPERFAMILY SSF54862 24 75 7.95E-6 T 12-10-2018 ABD1_06720 c15d15cd73662944ead6c5f75acc2790 377 SUPERFAMILY SSF103501 158 368 2.88E-28 T 12-10-2018 IPR036197 NarG-like superfamily ABD1_06720 c15d15cd73662944ead6c5f75acc2790 377 TIGRFAM TIGR02484 CitB: CitB domain protein 15 375 1.3E-119 T 12-10-2018 IPR012830 Citrate utilization protein B ABD1_13450 c33e9aa6094b762de14905b4e720c7fa 312 Gene3D G3DSA:1.20.1260.10 2 310 1.2E-136 T 12-10-2018 IPR012347 Ferritin-like ABD1_13450 c33e9aa6094b762de14905b4e720c7fa 312 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 8 296 1.3E-157 T 12-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 ABD1_13450 c33e9aa6094b762de14905b4e720c7fa 312 SUPERFAMILY SSF47240 28 270 5.81E-85 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_13450 c33e9aa6094b762de14905b4e720c7fa 312 Pfam PF05138 Phenylacetic acid catabolic protein 18 292 2.3E-103 T 12-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ABD1_01260 7ea6f8d412460f74a215be1658b63b94 102 SUPERFAMILY SSF82657 2 88 2.75E-26 T 12-10-2018 IPR036065 BolA-like superfamily ABD1_01260 7ea6f8d412460f74a215be1658b63b94 102 Pfam PF01722 BolA-like protein 12 85 6.1E-25 T 12-10-2018 IPR002634 BolA protein ABD1_01260 7ea6f8d412460f74a215be1658b63b94 102 Gene3D G3DSA:3.30.300.90 2 90 2.3E-26 T 12-10-2018 ABD1_01260 7ea6f8d412460f74a215be1658b63b94 102 PIRSF PIRSF003113 1 98 3.2E-32 T 12-10-2018 IPR002634 BolA protein ABD1_17140 00df7c66806489fdf7888b9cad1c2841 279 Gene3D G3DSA:3.40.50.300 7 271 2.8E-65 T 12-10-2018 ABD1_17140 00df7c66806489fdf7888b9cad1c2841 279 SUPERFAMILY SSF52540 8 235 1.46E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_17140 00df7c66806489fdf7888b9cad1c2841 279 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_17140 00df7c66806489fdf7888b9cad1c2841 279 Pfam PF00005 ABC transporter 27 166 4.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_17140 00df7c66806489fdf7888b9cad1c2841 279 SMART SM00382 36 217 3.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_19870 3f51933ff2092013517ed5986e437c72 146 Gene3D G3DSA:3.10.290.10 5 112 2.5E-35 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_19870 3f51933ff2092013517ed5986e437c72 146 SUPERFAMILY SSF55174 12 108 9.42E-26 T 12-10-2018 ABD1_19870 3f51933ff2092013517ed5986e437c72 146 PIRSF PIRSF016821 10 135 2.2E-39 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 ABD1_19870 3f51933ff2092013517ed5986e437c72 146 SMART SM00363 13 77 1.7E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_19870 3f51933ff2092013517ed5986e437c72 146 Pfam PF01479 S4 domain 13 58 5.1E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 Gene3D G3DSA:1.10.10.60 91 146 7.2E-16 T 12-10-2018 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 SUPERFAMILY SSF46689 103 136 2.69E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 Gene3D G3DSA:1.10.10.60 147 190 1.4E-12 T 12-10-2018 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 SMART SM00342 103 185 6.8E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 169 185 1.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 154 169 1.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 SUPERFAMILY SSF46689 140 185 1.43E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 181 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABD1_14690 695b2088ea87336bafa807d737f6f3ba 190 Pfam PF12833 Helix-turn-helix domain 109 185 3.5E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_17590 177627c9f807fa36f74e529a46f4ee3a 195 Gene3D G3DSA:3.40.470.10 5 194 1.8E-20 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_17590 177627c9f807fa36f74e529a46f4ee3a 195 SUPERFAMILY SSF52141 9 190 4.84E-23 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABD1_33840 433ff43bf8a3e7fbb4fdccb9bb31fb82 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 313 1.0E-117 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ABD1_33840 433ff43bf8a3e7fbb4fdccb9bb31fb82 318 Pfam PF03741 Integral membrane protein TerC family 80 282 6.2E-52 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 SUPERFAMILY SSF54423 31 82 1.61E-12 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 Pfam PF13098 Thioredoxin-like domain 107 226 1.7E-29 T 12-10-2018 IPR012336 Thioredoxin-like fold ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 Gene3D G3DSA:3.10.450.70 20 82 5.8E-10 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 Gene3D G3DSA:3.40.30.10 99 230 1.6E-35 T 12-10-2018 ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 9.2E-15 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ABD1_33920 88433eeaa5c35f252a41d3bbdfc9e63e 232 SUPERFAMILY SSF52833 92 226 9.9E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_09840 3b0e3b81b714ecc1f751976a9302a835 258 PIRSF PIRSF006157 1 258 4.5E-82 T 12-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 ABD1_09840 3b0e3b81b714ecc1f751976a9302a835 258 Gene3D G3DSA:3.40.830.10 2 258 4.4E-84 T 12-10-2018 ABD1_09840 3b0e3b81b714ecc1f751976a9302a835 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 1.6E-41 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ABD1_09840 3b0e3b81b714ecc1f751976a9302a835 258 SUPERFAMILY SSF53213 6 258 1.07E-82 T 12-10-2018 ABD1_12910 321351860a186a54eab7afde12c89730 410 Pfam PF01566 Natural resistance-associated macrophage protein 44 376 1.0E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABD1_25110 b92d17a5956d08e06d9c878f6b8d65fc 151 Gene3D G3DSA:3.10.129.10 2 138 4.8E-33 T 12-10-2018 ABD1_25110 b92d17a5956d08e06d9c878f6b8d65fc 151 Pfam PF13279 Thioesterase-like superfamily 11 130 9.4E-11 T 12-10-2018 ABD1_25110 b92d17a5956d08e06d9c878f6b8d65fc 151 SUPERFAMILY SSF54637 3 134 3.34E-39 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_05640 9dfd0eec4dcb774a936697431dcd2968 381 Gene3D G3DSA:3.30.565.60 214 378 3.1E-46 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily ABD1_05640 9dfd0eec4dcb774a936697431dcd2968 381 Gene3D G3DSA:3.30.950.30 3 139 9.4E-30 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily ABD1_05640 9dfd0eec4dcb774a936697431dcd2968 381 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 290 371 1.8E-21 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain ABD1_05640 9dfd0eec4dcb774a936697431dcd2968 381 Pfam PF04326 Putative DNA-binding domain 15 129 1.8E-21 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 ABD1_08370 a120e0743f77bdbabd4cf4fcfc6d45d7 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 1.1E-8 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 ABD1_08370 a120e0743f77bdbabd4cf4fcfc6d45d7 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 4.8E-30 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 ABD1_08370 a120e0743f77bdbabd4cf4fcfc6d45d7 151 Gene3D G3DSA:1.20.120.50 1 127 6.2E-31 T 12-10-2018 IPR035938 Hemerythrin-like superfamily ABD1_08370 a120e0743f77bdbabd4cf4fcfc6d45d7 151 SUPERFAMILY SSF47188 2 124 1.44E-27 T 12-10-2018 IPR035938 Hemerythrin-like superfamily ABD1_28230 1cd0001ce16bebf07b706da20d2cc5d4 157 Gene3D G3DSA:2.40.128.270 45 156 4.5E-9 T 12-10-2018 IPR038670 HslJ-like superfamily ABD1_28230 1cd0001ce16bebf07b706da20d2cc5d4 157 Pfam PF03724 META domain 48 153 1.5E-14 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ABD1_30780 abcf55e515e0d6a652564a7cbfa9c59a 246 Pfam PF04350 Pilus assembly protein, PilO 73 220 8.5E-50 T 12-10-2018 IPR007445 Pilus assembly protein, PilO ABD1_30780 abcf55e515e0d6a652564a7cbfa9c59a 246 PIRSF PIRSF016482 9 237 1.4E-59 T 12-10-2018 IPR007445 Pilus assembly protein, PilO ABD1_30780 abcf55e515e0d6a652564a7cbfa9c59a 246 Gene3D G3DSA:3.30.70.60 118 230 2.5E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ABD1_11800 8f6eadb3cdadddcbd2b9da7167d58764 180 Gene3D G3DSA:1.20.141.10 2 180 2.7E-42 T 12-10-2018 ABD1_11800 8f6eadb3cdadddcbd2b9da7167d58764 180 SUPERFAMILY SSF53955 1 179 1.57E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_11800 8f6eadb3cdadddcbd2b9da7167d58764 180 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.1E-23 T 12-10-2018 IPR008565 Protein of unknown function DUF847 ABD1_11800 8f6eadb3cdadddcbd2b9da7167d58764 180 Pfam PF09374 Predicted Peptidoglycan domain 97 178 1.1E-16 T 12-10-2018 IPR018537 Peptidoglycan binding domain ABD1_30640 094ce16cbd2e7c7940d80330ca19acae 542 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 369 532 1.9E-13 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal ABD1_30640 094ce16cbd2e7c7940d80330ca19acae 542 Pfam PF04932 O-Antigen ligase 192 342 4.1E-16 T 12-10-2018 IPR007016 O-antigen ligase-related ABD1_30640 094ce16cbd2e7c7940d80330ca19acae 542 Pfam PF15864 Protein glycosylation ligase 153 178 2.2E-10 T 12-10-2018 IPR031726 Protein glycosylation ligase domain ABD1_17360 ed3ca9e38c4cb966b0bd75e8f1c6d0bd 176 SUPERFAMILY SSF50475 16 171 8.34E-47 T 12-10-2018 ABD1_17360 ed3ca9e38c4cb966b0bd75e8f1c6d0bd 176 Gene3D G3DSA:2.30.110.10 3 175 2.1E-46 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABD1_17360 ed3ca9e38c4cb966b0bd75e8f1c6d0bd 176 SMART SM00903 24 167 6.2E-58 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_17360 ed3ca9e38c4cb966b0bd75e8f1c6d0bd 176 Pfam PF01613 Flavin reductase like domain 25 166 9.2E-33 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABD1_28850 7be0174348a88400f46d936922512316 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 25 145 4.0E-27 T 12-10-2018 IPR019223 Domain of unknown function DUF2147 ABD1_28850 7be0174348a88400f46d936922512316 147 Gene3D G3DSA:2.40.128.520 20 147 3.0E-19 T 12-10-2018 ABD1_06590 07cffdbe524e747b71dab1492e2f2f1b 106 SUPERFAMILY SSF103481 6 104 8.63E-21 T 12-10-2018 ABD1_06590 07cffdbe524e747b71dab1492e2f2f1b 106 Gene3D G3DSA:1.10.3730.20 1 106 3.5E-32 T 12-10-2018 ABD1_06590 07cffdbe524e747b71dab1492e2f2f1b 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.9E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 SUPERFAMILY SSF52833 143 258 1.14E-11 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 SUPERFAMILY SSF52833 36 134 2.24E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 258 2.7E-10 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 113 1.3E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 Gene3D G3DSA:3.40.30.10 33 132 1.6E-14 T 12-10-2018 ABD1_16080 72376c996c317c276a9cbfe4fd01b7a6 259 Gene3D G3DSA:3.40.30.10 142 259 2.9E-17 T 12-10-2018 ABD1_00150 024928debca388fffc3e5b333b9b69ef 103 Gene3D G3DSA:1.25.40.20 10 103 4.2E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_00150 024928debca388fffc3e5b333b9b69ef 103 SUPERFAMILY SSF48403 21 101 5.29E-19 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_00150 024928debca388fffc3e5b333b9b69ef 103 Pfam PF12796 Ankyrin repeats (3 copies) 23 100 1.2E-13 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain ABD1_00150 024928debca388fffc3e5b333b9b69ef 103 SMART SM00248 49 78 5.9E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABD1_25140 7c1bea3577a978d037c3cd92500cb542 138 Pfam PF03061 Thioesterase superfamily 47 122 4.4E-10 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_25140 7c1bea3577a978d037c3cd92500cb542 138 SUPERFAMILY SSF54637 22 135 3.32E-23 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_25140 7c1bea3577a978d037c3cd92500cb542 138 Gene3D G3DSA:3.10.129.10 4 137 3.2E-50 T 12-10-2018 ABD1_18420 74ff1e3ca0296c3b0e8b0d1e832fb0cf 457 Gene3D G3DSA:2.40.160.60 32 457 1.3E-18 T 12-10-2018 ABD1_18420 74ff1e3ca0296c3b0e8b0d1e832fb0cf 457 SUPERFAMILY SSF56935 20 457 3.43E-38 T 12-10-2018 ABD1_33570 b5f18de6694a15006d6335bebabc483d 429 SUPERFAMILY SSF52833 241 422 8.27E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 8.1E-45 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 Pfam PF00210 Ferritin-like domain 8 143 2.0E-34 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 3 22 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 85 105 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 23 43 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 44 64 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 106 126 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 128 149 5.0E-41 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 PIRSF PIRSF002560 1 154 1.7E-58 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 Gene3D G3DSA:1.20.1260.10 1 154 6.3E-59 T 12-10-2018 IPR012347 Ferritin-like ABD1_07570 6cc8852d14123c849d71c6120fab7b3b 154 SUPERFAMILY SSF47240 1 154 1.21E-45 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_20720 96dd8fb23b065bd13ac256b444cece38 103 Gene3D G3DSA:2.60.120.380 3 103 4.1E-22 T 12-10-2018 ABD1_20550 33a7dc907b773b8963771eb41a673aff 419 SUPERFAMILY SSF56601 35 389 1.76E-69 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_20550 33a7dc907b773b8963771eb41a673aff 419 Pfam PF00144 Beta-lactamase 35 385 4.4E-54 T 12-10-2018 IPR001466 Beta-lactamase-related ABD1_20550 33a7dc907b773b8963771eb41a673aff 419 Gene3D G3DSA:3.40.710.30 14 407 1.6E-99 T 12-10-2018 ABD1_22810 e43473124a11bbdedad2582a388a40dc 302 Gene3D G3DSA:3.40.50.10330 29 290 1.0E-89 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABD1_22810 e43473124a11bbdedad2582a388a40dc 302 SUPERFAMILY SSF111331 10 293 7.33E-87 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABD1_22810 e43473124a11bbdedad2582a388a40dc 302 Hamap MF_00361 NAD kinase [nadK]. 9 290 32.393 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABD1_22810 e43473124a11bbdedad2582a388a40dc 302 Gene3D G3DSA:2.60.200.30 131 267 1.0E-89 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABD1_22810 e43473124a11bbdedad2582a388a40dc 302 Pfam PF01513 ATP-NAD kinase 55 273 3.8E-63 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABD1_18210 5af122eb208134e905abd70561e3e6bc 594 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 128 138 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_18210 5af122eb208134e905abd70561e3e6bc 594 Gene3D G3DSA:3.50.30.80 382 546 4.3E-34 T 12-10-2018 ABD1_18210 5af122eb208134e905abd70561e3e6bc 594 Pfam PF00920 Dehydratase family 45 571 5.9E-158 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_18210 5af122eb208134e905abd70561e3e6bc 594 SUPERFAMILY SSF52016 382 578 4.39E-46 T 12-10-2018 ABD1_18210 5af122eb208134e905abd70561e3e6bc 594 SUPERFAMILY SSF143975 9 379 2.35E-116 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 SUPERFAMILY SSF64158 82 310 4.05E-81 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 Gene3D G3DSA:3.40.720.10 10 509 1.4E-209 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 Pfam PF01676 Metalloenzyme superfamily 11 499 6.1E-78 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 SUPERFAMILY SSF53649 11 511 9.68E-71 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 Gene3D G3DSA:3.40.1450.10 82 312 1.4E-209 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 49.02 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 PIRSF PIRSF001492 4 514 2.7E-198 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 2.3E-77 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_02160 997f821d2521ba885175fc1710784d3b 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 1.7E-220 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABD1_22700 4235ac36de99f1275ce32307fdbd9459 96 Gene3D G3DSA:1.20.1260.50 1 94 1.8E-28 T 12-10-2018 ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 SUPERFAMILY SSF56935 23 704 4.19E-128 T 12-10-2018 ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 Gene3D G3DSA:2.40.170.20 167 704 7.3E-119 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 156 9.4E-22 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 Pfam PF00593 TonB dependent receptor 230 703 6.7E-59 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 Gene3D G3DSA:2.170.130.10 45 166 2.1E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_19430 59d368f3a8d7992b9db4af816bcf9971 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 704 9.9E-104 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 347 33.883 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 Gene3D G3DSA:1.10.1610.10 22 345 4.7E-123 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 Gene3D G3DSA:3.40.50.10210 54 328 4.7E-123 T 12-10-2018 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 5.2E-126 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 SUPERFAMILY SSF52733 2 346 1.96E-111 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABD1_16460 12b47de036033d5494480b6e6af6e695 351 Pfam PF02277 Phosphoribosyltransferase 8 345 3.0E-124 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 SUPERFAMILY SSF52768 2 337 2.4E-82 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 Pfam PF00850 Histone deacetylase domain 28 335 3.4E-63 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 PRINTS PR01270 Histone deacetylase superfamily signature 154 177 6.5E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 PRINTS PR01270 Histone deacetylase superfamily signature 186 201 6.5E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 PRINTS PR01270 Histone deacetylase superfamily signature 272 282 6.5E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABD1_05500 27ca1b37a1b111ff23535b3baec5286b 354 Gene3D G3DSA:3.40.800.20 1 342 3.2E-114 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABD1_32000 3ad042ccecca03c72d71f6c4f61c76f4 245 Gene3D G3DSA:3.40.50.360 4 183 1.1E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_32000 3ad042ccecca03c72d71f6c4f61c76f4 245 Pfam PF03358 NADPH-dependent FMN reductase 11 155 1.8E-31 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABD1_32000 3ad042ccecca03c72d71f6c4f61c76f4 245 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 11 183 1.2E-71 T 12-10-2018 IPR019912 FMN reductase, MsuE-like ABD1_32000 3ad042ccecca03c72d71f6c4f61c76f4 245 SUPERFAMILY SSF52218 6 181 5.12E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 Gene3D G3DSA:1.20.1530.20 1 377 2.2E-85 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 SUPERFAMILY SSF51735 398 527 8.0E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 279 9.1E-79 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 Pfam PF02254 TrkA-N domain 400 512 1.6E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 Pfam PF00999 Sodium/hydrogen exchanger family 9 369 1.6E-68 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABD1_03390 190d38d061b797c27392c31cbc25d97b 613 Gene3D G3DSA:3.40.50.720 395 559 8.0E-35 T 12-10-2018 ABD1_27390 b22c818d500c0934cb8564254112c3a8 323 Gene3D G3DSA:3.40.1090.20 53 146 3.2E-17 T 12-10-2018 ABD1_27390 b22c818d500c0934cb8564254112c3a8 323 Gene3D G3DSA:3.40.1090.10 147 280 8.5E-19 T 12-10-2018 ABD1_27390 b22c818d500c0934cb8564254112c3a8 323 Pfam PF01734 Patatin-like phospholipase 57 214 1.1E-27 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABD1_27390 b22c818d500c0934cb8564254112c3a8 323 SUPERFAMILY SSF52151 24 304 6.28E-54 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 Gene3D G3DSA:1.25.40.10 25 271 2.2E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 SUPERFAMILY SSF81901 32 251 4.53E-25 T 12-10-2018 ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 SMART SM00671 60 95 7.9E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 SMART SM00671 96 132 7.9E-5 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 SMART SM00671 207 242 0.063 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 Pfam PF08238 Sel1 repeat 60 95 1.9E-5 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 Pfam PF08238 Sel1 repeat 209 241 8.0 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_27710 be2ba44a6c5945d3a7cfab8fadbf0db8 274 Pfam PF08238 Sel1 repeat 97 132 1.5 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_04670 2d0a3fa4d3bbcab13284c992758c528e 183 SUPERFAMILY SSF48317 9 175 9.81E-38 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABD1_04670 2d0a3fa4d3bbcab13284c992758c528e 183 Gene3D G3DSA:1.20.144.10 62 173 1.2E-20 T 12-10-2018 ABD1_04670 2d0a3fa4d3bbcab13284c992758c528e 183 SMART SM00014 63 173 4.4E-16 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_04670 2d0a3fa4d3bbcab13284c992758c528e 183 Pfam PF01569 PAP2 superfamily 67 175 4.5E-22 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_15080 224457c4d1eb88c18fbba9a6d3cd1a76 331 Gene3D G3DSA:1.10.10.60 224 331 2.1E-22 T 12-10-2018 ABD1_15080 224457c4d1eb88c18fbba9a6d3cd1a76 331 SUPERFAMILY SSF46689 279 328 4.93E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_15080 224457c4d1eb88c18fbba9a6d3cd1a76 331 Pfam PF12833 Helix-turn-helix domain 250 328 4.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_15080 224457c4d1eb88c18fbba9a6d3cd1a76 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 198 3.4E-29 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_15080 224457c4d1eb88c18fbba9a6d3cd1a76 331 SMART SM00342 244 326 8.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_10560 6bb7ba8e163eae9f9fdfc64a7c964503 210 Gene3D G3DSA:1.20.120.740 2 175 1.0E-39 T 12-10-2018 ABD1_10560 6bb7ba8e163eae9f9fdfc64a7c964503 210 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 166 2.2E-10 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 ABD1_10560 6bb7ba8e163eae9f9fdfc64a7c964503 210 SUPERFAMILY SSF101327 7 167 1.15E-35 T 12-10-2018 IPR036255 YgfB-like superfamily ABD1_10560 6bb7ba8e163eae9f9fdfc64a7c964503 210 Pfam PF03695 Uncharacterised protein family (UPF0149) 21 164 4.0E-23 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 ABD1_25780 5bb6d5de3a25892a823b9f67a70e193e 548 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 62 221 6.7E-21 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like ABD1_13270 bc33cdd0f95b505d77099b28f1b77dfd 385 Pfam PF06224 Winged helix DNA-binding domain 32 367 4.4E-70 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 ABD1_16840 64fa048cf51d8a95f6ee44869a2b1528 395 Pfam PF05762 VWA domain containing CoxE-like protein 190 277 7.5E-8 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 PIRSF PIRSF002181 1 142 1.4E-50 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.566 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 Gene3D G3DSA:3.90.1180.10 1 142 3.1E-62 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 Pfam PF00572 Ribosomal protein L13 15 138 1.4E-56 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 SUPERFAMILY SSF52161 1 140 2.35E-58 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABD1_28890 3bfd4900fe253994c29a57aaba17db0e 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 4.9E-63 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_04910 35f218019a2f257fc806d33fd92d23b3 181 Pfam PF11659 Protein of unknown function (DUF3261) 40 170 1.4E-22 T 12-10-2018 IPR021675 Protein of unknown function DUF3261 ABD1_09020 cb49eb6fc1757a46227fa6c51800bd92 309 SUPERFAMILY SSF54593 1 281 1.21E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_09020 cb49eb6fc1757a46227fa6c51800bd92 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 266 7.1E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_09020 cb49eb6fc1757a46227fa6c51800bd92 309 Gene3D G3DSA:3.10.180.10 147 291 3.0E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_17250 ff18f29ead034b49ba50b728573f3f84 469 Pfam PF02667 Short chain fatty acid transporter 9 455 6.4E-87 T 12-10-2018 IPR006160 Short chain fatty acid transporter AtoE ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 SMART SM00363 98 162 4.3E-17 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 9.9E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.198 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:3.10.290.10 97 193 7.8E-79 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 SMART SM01390 3 97 2.1E-47 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:1.10.1050.10 6 208 7.8E-79 T 12-10-2018 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.3E-80 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABD1_29420 ec7013bc7af99935b03480892bc47b5e 208 SUPERFAMILY SSF55174 2 208 8.24E-68 T 12-10-2018 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 Gene3D G3DSA:2.60.300.12 1 106 1.4E-37 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 2.4E-52 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 9.4E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 SUPERFAMILY SSF89360 1 95 7.85E-33 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_16170 3a5d820f1a826a18a6cc686095dbf625 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 1.6E-22 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Pfam PF08245 Mur ligase middle domain 110 282 2.7E-26 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Gene3D G3DSA:3.40.1190.10 94 302 1.0E-63 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 SUPERFAMILY SSF51984 10 94 6.02E-18 T 12-10-2018 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 SUPERFAMILY SSF53623 96 300 5.49E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 33.567 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Gene3D G3DSA:3.40.50.720 8 93 4.2E-22 T 12-10-2018 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 383 4.0E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 SUPERFAMILY SSF53244 302 447 3.36E-42 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 7.9E-120 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABD1_02290 71d7281f76ddbe7aa0e936261d02a6e4 448 Gene3D G3DSA:3.90.190.20 303 443 5.9E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABD1_26960 8c98274ddaeae885f4f41ad9f8f822b4 199 SUPERFAMILY SSF48317 13 190 1.63E-11 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABD1_26960 8c98274ddaeae885f4f41ad9f8f822b4 199 Pfam PF01569 PAP2 superfamily 66 182 2.4E-8 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABD1_04580 1eae928ea4374ed9894b62922c68a316 452 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 452 3.0E-148 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABD1_04580 1eae928ea4374ed9894b62922c68a316 452 Pfam PF02447 GntP family permease 8 450 3.5E-159 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABD1_04580 1eae928ea4374ed9894b62922c68a316 452 PIRSF PIRSF002746 4 452 1.2E-157 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABD1_25710 981f453b810730e16cf69a52f09b051b 474 SUPERFAMILY SSF56954 2 457 2.09E-57 T 12-10-2018 ABD1_25710 981f453b810730e16cf69a52f09b051b 474 Pfam PF02321 Outer membrane efflux protein 19 258 3.3E-16 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_25710 981f453b810730e16cf69a52f09b051b 474 Pfam PF02321 Outer membrane efflux protein 289 453 6.7E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_28900 3579afc6a353333caf8033bee1297eeb 128 SUPERFAMILY SSF54211 4 128 1.18E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABD1_28900 3579afc6a353333caf8033bee1297eeb 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ABD1_28900 3579afc6a353333caf8033bee1297eeb 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 31.08 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid ABD1_28900 3579afc6a353333caf8033bee1297eeb 128 Gene3D G3DSA:3.30.230.10 2 128 3.4E-50 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABD1_28900 3579afc6a353333caf8033bee1297eeb 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 3.5E-44 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ABD1_30770 3050aafa6a9ca926cd325930d97e83d9 176 Pfam PF04351 Pilus assembly protein, PilP 28 171 3.8E-43 T 12-10-2018 IPR007446 Pilus assembly protein PilP ABD1_30770 3050aafa6a9ca926cd325930d97e83d9 176 PIRSF PIRSF016481 2 173 9.8E-37 T 12-10-2018 IPR007446 Pilus assembly protein PilP ABD1_30770 3050aafa6a9ca926cd325930d97e83d9 176 Gene3D G3DSA:2.30.30.830 78 172 3.5E-29 T 12-10-2018 ABD1_32480 6b9b7192e2a572f698dcf0ddc9dc282e 167 SUPERFAMILY SSF158694 3 163 5.62E-40 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABD1_32480 6b9b7192e2a572f698dcf0ddc9dc282e 167 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 164 1.4E-54 T 12-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 ABD1_32480 6b9b7192e2a572f698dcf0ddc9dc282e 167 Pfam PF09349 OHCU decarboxylase 7 161 1.6E-33 T 12-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABD1_32480 6b9b7192e2a572f698dcf0ddc9dc282e 167 Gene3D G3DSA:1.10.3330.10 1 166 1.6E-45 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABD1_18930 eb8b4da73a9fa76616b51f6a3434b68f 373 Gene3D G3DSA:3.90.1200.10 122 354 2.0E-62 T 12-10-2018 ABD1_18930 eb8b4da73a9fa76616b51f6a3434b68f 373 Gene3D G3DSA:3.30.200.20 15 116 7.6E-27 T 12-10-2018 ABD1_18930 eb8b4da73a9fa76616b51f6a3434b68f 373 SUPERFAMILY SSF56112 15 342 8.24E-59 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_18930 eb8b4da73a9fa76616b51f6a3434b68f 373 Pfam PF01636 Phosphotransferase enzyme family 38 265 1.5E-40 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase ABD1_12730 b8a0580974685e0ce26c4c66f81c0166 191 Gene3D G3DSA:3.40.630.30 42 175 1.3E-15 T 12-10-2018 ABD1_12730 b8a0580974685e0ce26c4c66f81c0166 191 SUPERFAMILY SSF55729 52 177 1.17E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_12730 b8a0580974685e0ce26c4c66f81c0166 191 Pfam PF13673 Acetyltransferase (GNAT) domain 73 170 2.4E-11 T 12-10-2018 IPR000182 GNAT domain ABD1_06630 c9d16471470afa63bfcd7d63b5ba756d 331 Pfam PF00962 Adenosine/AMP deaminase 6 328 7.7E-91 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ABD1_06630 c9d16471470afa63bfcd7d63b5ba756d 331 Gene3D G3DSA:3.20.20.140 1 331 1.9E-95 T 12-10-2018 ABD1_06630 c9d16471470afa63bfcd7d63b5ba756d 331 SUPERFAMILY SSF51556 3 325 2.08E-73 T 12-10-2018 IPR032466 Metal-dependent hydrolase ABD1_06630 c9d16471470afa63bfcd7d63b5ba756d 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 1.5E-108 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 ABD1_06630 c9d16471470afa63bfcd7d63b5ba756d 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 51.535 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 ABD1_10890 26541e32cc0e16c0852d47bc2b701d53 183 SUPERFAMILY SSF46689 8 74 2.82E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_10890 26541e32cc0e16c0852d47bc2b701d53 183 Gene3D G3DSA:1.10.357.10 2 182 6.4E-19 T 12-10-2018 ABD1_10890 26541e32cc0e16c0852d47bc2b701d53 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_10890 26541e32cc0e16c0852d47bc2b701d53 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_10890 26541e32cc0e16c0852d47bc2b701d53 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 4.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_11690 fa0e24285b2629a75662bfb1aceec0aa 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 126 1.4E-46 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system ABD1_11690 fa0e24285b2629a75662bfb1aceec0aa 134 SUPERFAMILY SSF143100 1 63 1.83E-20 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like ABD1_11690 fa0e24285b2629a75662bfb1aceec0aa 134 Gene3D G3DSA:3.30.160.250 1 85 1.1E-26 T 12-10-2018 ABD1_01280 d0730140f608c88f6536de3fc743611c 280 Gene3D G3DSA:3.40.50.300 2 280 5.8E-60 T 12-10-2018 ABD1_01280 d0730140f608c88f6536de3fc743611c 280 Pfam PF13614 AAA domain 6 206 2.3E-37 T 12-10-2018 IPR025669 AAA domain ABD1_01280 d0730140f608c88f6536de3fc743611c 280 SUPERFAMILY SSF52540 3 278 3.78E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_26950 af40e7fab6ce20660a7498c0ffa39df8 395 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ABD1_26950 af40e7fab6ce20660a7498c0ffa39df8 395 Pfam PF00909 Ammonium Transporter Family 8 386 2.3E-84 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ABD1_26950 af40e7fab6ce20660a7498c0ffa39df8 395 Gene3D G3DSA:1.10.3430.10 1 394 2.9E-97 T 12-10-2018 IPR029020 Ammonium/urea transporter ABD1_26950 af40e7fab6ce20660a7498c0ffa39df8 395 SUPERFAMILY SSF111352 2 370 2.09E-94 T 12-10-2018 ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 161 2.7E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 696 5.7E-89 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 Gene3D G3DSA:2.40.170.20 178 699 1.4E-124 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 Gene3D G3DSA:2.170.130.10 45 177 1.5E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 Pfam PF00593 TonB dependent receptor 245 698 5.4E-38 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABD1_16540 0823f77a1e8b27a7ded5020d506f6f1a 699 SUPERFAMILY SSF56935 25 699 4.86E-109 T 12-10-2018 ABD1_10150 7b655098dfc87e88b0a620faff1215bf 121 Gene3D G3DSA:3.40.960.10 7 112 1.4E-5 T 12-10-2018 ABD1_28680 48699c59348a86ac820badffa9576db8 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 2.7E-62 T 12-10-2018 IPR007551 Protein of unknown function DUF520 ABD1_28680 48699c59348a86ac820badffa9576db8 162 Gene3D G3DSA:3.30.70.860 96 162 9.8E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal ABD1_28680 48699c59348a86ac820badffa9576db8 162 SUPERFAMILY SSF89963 2 87 1.88E-28 T 12-10-2018 IPR036183 YajQ-like superfamily ABD1_28680 48699c59348a86ac820badffa9576db8 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.752 T 12-10-2018 IPR007551 Protein of unknown function DUF520 ABD1_28680 48699c59348a86ac820badffa9576db8 162 SUPERFAMILY SSF89963 90 162 1.2E-27 T 12-10-2018 IPR036183 YajQ-like superfamily ABD1_28680 48699c59348a86ac820badffa9576db8 162 Gene3D G3DSA:3.30.70.990 9 95 1.9E-28 T 12-10-2018 IPR035570 UPF0234, N-terminal ABD1_04340 80b8cc850ee2cc592f21f77f88715e05 730 SUPERFAMILY SSF63829 484 686 1.9E-5 T 12-10-2018 ABD1_04340 80b8cc850ee2cc592f21f77f88715e05 730 Pfam PF05787 Bacterial protein of unknown function (DUF839) 83 686 8.2E-142 T 12-10-2018 IPR008557 Protein of unknown function DUF839 ABD1_15780 fb1adc75b94b2ba222c8e4e9808423c1 158 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 143 41.028 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ABD1_15780 fb1adc75b94b2ba222c8e4e9808423c1 158 Pfam PF14437 MafB19-like deaminase 1 143 4.2E-30 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ABD1_15780 fb1adc75b94b2ba222c8e4e9808423c1 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 84 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABD1_15780 fb1adc75b94b2ba222c8e4e9808423c1 158 SUPERFAMILY SSF53927 1 147 2.22E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABD1_15780 fb1adc75b94b2ba222c8e4e9808423c1 158 Gene3D G3DSA:3.40.140.10 1 158 1.9E-54 T 12-10-2018 ABD1_29340 4bd12ba7aea8918a5adcd62773892d92 188 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 29 177 3.0E-46 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria ABD1_29340 4bd12ba7aea8918a5adcd62773892d92 188 Gene3D G3DSA:1.20.1540.10 6 181 1.0E-15 T 12-10-2018 IPR035952 Rhomboid-like superfamily ABD1_29340 4bd12ba7aea8918a5adcd62773892d92 188 Pfam PF01694 Rhomboid family 39 181 3.3E-13 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABD1_29340 4bd12ba7aea8918a5adcd62773892d92 188 SUPERFAMILY SSF144091 11 186 1.31E-23 T 12-10-2018 ABD1_22140 1f765199c76adf450c5d2c389480c056 182 Pfam PF05229 Spore Coat Protein U domain 27 179 1.0E-10 T 12-10-2018 IPR007893 Spore coat protein U ABD1_33280 aa3448f3a02ca16050208e3ad48c1bca 279 Pfam PF01226 Formate/nitrite transporter 34 270 2.3E-40 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 ABD1_33280 aa3448f3a02ca16050208e3ad48c1bca 279 Gene3D G3DSA:1.20.1080.10 32 278 4.5E-35 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ABD1_05600 a5ae2f33910ca5c99c26b7f24b179519 348 Pfam PF06067 Domain of unknown function (DUF932) 77 328 1.4E-78 T 12-10-2018 IPR026325 Protein of unknown function DUF932 ABD1_05600 a5ae2f33910ca5c99c26b7f24b179519 348 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 344 5.7E-118 T 12-10-2018 IPR017686 Phage/plasmid-like protein ABD1_02510 bc74124a3265c2d9e1d399316af6bf24 247 Pfam PF01203 Type II secretion system (T2SS), protein N 41 211 4.9E-15 T 12-10-2018 IPR022792 Type II secretion system, protein N ABD1_32010 87a3bdf99b6f0d7bf3ad436f2aa2eba1 370 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 1.4E-184 T 12-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 ABD1_32010 87a3bdf99b6f0d7bf3ad436f2aa2eba1 370 Pfam PF00296 Luciferase-like monooxygenase 9 328 8.9E-71 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABD1_32010 87a3bdf99b6f0d7bf3ad436f2aa2eba1 370 Gene3D G3DSA:3.20.20.30 4 359 2.3E-106 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_32010 87a3bdf99b6f0d7bf3ad436f2aa2eba1 370 SUPERFAMILY SSF51679 5 357 5.63E-88 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABD1_21490 5e3403e98f3b987b02459849d4b376df 342 SMART SM00342 251 334 1.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_21490 5e3403e98f3b987b02459849d4b376df 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 207 2.5E-35 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_21490 5e3403e98f3b987b02459849d4b376df 342 Pfam PF12833 Helix-turn-helix domain 258 335 3.8E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_21490 5e3403e98f3b987b02459849d4b376df 342 Gene3D G3DSA:1.10.10.60 234 341 7.5E-25 T 12-10-2018 ABD1_21490 5e3403e98f3b987b02459849d4b376df 342 SUPERFAMILY SSF46689 287 336 3.36E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_21760 362716462171d053add4ed4876e5e515 259 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 2.3E-10 T 12-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal ABD1_21760 362716462171d053add4ed4876e5e515 259 Gene3D G3DSA:3.10.620.30 67 250 1.7E-46 T 12-10-2018 ABD1_21760 362716462171d053add4ed4876e5e515 259 SMART SM00460 153 215 1.2E-16 T 12-10-2018 IPR002931 Transglutaminase-like ABD1_21760 362716462171d053add4ed4876e5e515 259 Pfam PF01841 Transglutaminase-like superfamily 125 212 3.6E-22 T 12-10-2018 IPR002931 Transglutaminase-like ABD1_21760 362716462171d053add4ed4876e5e515 259 SUPERFAMILY SSF54001 101 240 8.93E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.194 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 1.4E-26 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 Gene3D G3DSA:3.100.10.10 73 146 3.5E-13 T 12-10-2018 ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 SUPERFAMILY SSF52080 6 145 3.66E-41 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29470 0e86c0aaa49f0b327a38dec1caf24227 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 9.3E-45 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_09490 53310e0eefa439f1d854119a9fcbba9a 145 Gene3D G3DSA:3.30.530.20 2 145 1.4E-19 T 12-10-2018 IPR023393 START-like domain superfamily ABD1_09490 53310e0eefa439f1d854119a9fcbba9a 145 SUPERFAMILY SSF55961 2 139 1.35E-21 T 12-10-2018 ABD1_09490 53310e0eefa439f1d854119a9fcbba9a 145 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 120 5.3E-10 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ABD1_20590 8dcd7ed5f242b7466c7f0b3fa1d86511 126 Pfam PF05232 Chlorhexidine efflux transporter 52 113 4.2E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter ABD1_20590 8dcd7ed5f242b7466c7f0b3fa1d86511 126 Pfam PF05232 Chlorhexidine efflux transporter 1 46 3.3E-8 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter ABD1_12880 7c4258b6311a5744beabe8199ff3d4f7 394 SUPERFAMILY SSF56601 115 371 6.28E-23 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABD1_12880 7c4258b6311a5744beabe8199ff3d4f7 394 Pfam PF13354 Beta-lactamase enzyme family 139 236 4.6E-17 T 12-10-2018 ABD1_12880 7c4258b6311a5744beabe8199ff3d4f7 394 Gene3D G3DSA:1.10.8.620 245 298 1.1E-45 T 12-10-2018 ABD1_12880 7c4258b6311a5744beabe8199ff3d4f7 394 Gene3D G3DSA:3.40.710.10 138 362 1.1E-45 T 12-10-2018 ABD1_17170 7ec65063efdd9d58cecc2cf9119e30da 428 Pfam PF07690 Major Facilitator Superfamily 261 421 8.9E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_17170 7ec65063efdd9d58cecc2cf9119e30da 428 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_17170 7ec65063efdd9d58cecc2cf9119e30da 428 Gene3D G3DSA:1.20.1250.20 11 425 2.9E-69 T 12-10-2018 ABD1_17170 7ec65063efdd9d58cecc2cf9119e30da 428 Pfam PF00083 Sugar (and other) transporter 18 222 5.0E-26 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABD1_17170 7ec65063efdd9d58cecc2cf9119e30da 428 SUPERFAMILY SSF103473 8 421 6.02E-69 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_26100 5eec93ba7c0dda394f6010a7c3d923f6 287 Pfam PF01464 Transglycosylase SLT domain 93 198 6.0E-31 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 ABD1_26100 5eec93ba7c0dda394f6010a7c3d923f6 287 Gene3D G3DSA:1.10.530.10 50 216 1.2E-51 T 12-10-2018 ABD1_26100 5eec93ba7c0dda394f6010a7c3d923f6 287 SUPERFAMILY SSF53955 86 211 8.44E-50 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_19630 e8b90401430b5c63702a1f74b79d95a3 433 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 2.0E-140 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABD1_19630 e8b90401430b5c63702a1f74b79d95a3 433 Pfam PF05525 Branched-chain amino acid transport protein 8 428 6.3E-142 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABD1_09040 05d5195c3e168866addaf571ca0e4943 407 Gene3D G3DSA:1.20.1250.20 217 406 9.3E-32 T 12-10-2018 ABD1_09040 05d5195c3e168866addaf571ca0e4943 407 Pfam PF07690 Major Facilitator Superfamily 18 369 4.8E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_09040 05d5195c3e168866addaf571ca0e4943 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 282 299 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_09040 05d5195c3e168866addaf571ca0e4943 407 SUPERFAMILY SSF103473 5 406 4.19E-69 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_09040 05d5195c3e168866addaf571ca0e4943 407 Gene3D G3DSA:1.20.1250.20 8 200 4.1E-34 T 12-10-2018 ABD1_22190 6cc1401e320905ae329e32f64ca9e2d4 300 Pfam PF05673 Protein of unknown function (DUF815) 37 290 3.9E-92 T 12-10-2018 IPR008533 Domain of unknown function DUF815 ABD1_22190 6cc1401e320905ae329e32f64ca9e2d4 300 Gene3D G3DSA:3.40.50.300 57 196 4.7E-8 T 12-10-2018 ABD1_22190 6cc1401e320905ae329e32f64ca9e2d4 300 SUPERFAMILY SSF52540 61 261 1.99E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_30420 7d46c65a3eac0a174b7c93cb9df77ad3 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 2.2E-37 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_06850 93119cfd80f8829f0fa420aa98b734c1 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_06850 93119cfd80f8829f0fa420aa98b734c1 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_06850 93119cfd80f8829f0fa420aa98b734c1 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.5E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_06850 93119cfd80f8829f0fa420aa98b734c1 184 Gene3D G3DSA:1.10.357.10 3 182 7.9E-20 T 12-10-2018 ABD1_06850 93119cfd80f8829f0fa420aa98b734c1 184 SUPERFAMILY SSF46689 9 67 7.7E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_04750 de20833289bc7bf29977503b0826b3c3 232 SUPERFAMILY SSF48452 93 192 3.8E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_04750 de20833289bc7bf29977503b0826b3c3 232 Gene3D G3DSA:1.25.40.10 46 198 4.4E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_04750 de20833289bc7bf29977503b0826b3c3 232 PIRSF PIRSF006170 1 217 5.8E-64 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 ABD1_04750 de20833289bc7bf29977503b0826b3c3 232 Pfam PF09976 Tetratricopeptide repeat-like domain 13 212 5.4E-44 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 ABD1_04510 4f0c66f7457444c898a5588ad67a9c7d 238 Pfam PF11008 Protein of unknown function (DUF2846) 55 163 6.4E-25 T 12-10-2018 IPR022548 Domain of unknown function DUF2846 ABD1_21520 494042ec8ab7f0269d9d7988f303a53a 280 Gene3D G3DSA:3.40.50.880 6 280 3.7E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_21520 494042ec8ab7f0269d9d7988f303a53a 280 Pfam PF17124 ThiJ/PfpI family-like 46 181 1.7E-13 T 12-10-2018 IPR032633 ThiJ/PfpI family-like ABD1_21520 494042ec8ab7f0269d9d7988f303a53a 280 SUPERFAMILY SSF52317 25 279 3.85E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 SMART SM00880 228 480 2.1E-55 T 12-10-2018 IPR007899 CHAD domain ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 Pfam PF05235 CHAD domain 231 445 1.2E-35 T 12-10-2018 IPR007899 CHAD domain ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 SMART SM01118 1 202 1.0E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 Gene3D G3DSA:1.40.20.10 208 486 4.2E-47 T 12-10-2018 IPR038186 CHAD domain superfamily ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 Gene3D G3DSA:2.40.320.10 1 197 4.2E-34 T 12-10-2018 ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 Pfam PF01928 CYTH domain 1 194 4.4E-20 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ABD1_24550 586c03600d56c6f41be5a4e8478732c5 487 SUPERFAMILY SSF55154 1 211 6.05E-37 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ABD1_27540 324351dc1509f6863fd6e44d951c6865 293 SUPERFAMILY SSF53474 6 286 8.53E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_27540 324351dc1509f6863fd6e44d951c6865 293 Pfam PF00561 alpha/beta hydrolase fold 36 138 2.8E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_27540 324351dc1509f6863fd6e44d951c6865 293 Gene3D G3DSA:3.40.50.1820 2 291 1.5E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23100 52ea21df380c46c558afca9a763d9ce3 228 SUPERFAMILY SSF53098 3 200 1.33E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily ABD1_23100 52ea21df380c46c558afca9a763d9ce3 228 Gene3D G3DSA:3.30.420.10 3 184 8.4E-20 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABD1_23100 52ea21df380c46c558afca9a763d9ce3 228 SMART SM00479 2 170 0.0014 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABD1_23100 52ea21df380c46c558afca9a763d9ce3 228 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 186 213 2.0E-5 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 SMART SM00926 8 62 3.9E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 7.7E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Gene3D G3DSA:3.40.228.10 141 334 7.3E-88 T 12-10-2018 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Pfam PF01568 Molydopterin dinucleotide binding domain 637 750 4.2E-17 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Gene3D G3DSA:2.20.25.90 2 67 5.1E-14 T 12-10-2018 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 SUPERFAMILY SSF50692 633 756 1.58E-24 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Gene3D G3DSA:2.40.40.20 615 757 5.2E-20 T 12-10-2018 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Gene3D G3DSA:3.40.50.740 72 483 7.3E-88 T 12-10-2018 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 SUPERFAMILY SSF53706 10 597 4.45E-115 T 12-10-2018 ABD1_20270 36c280658792adee04c07e7b52e40bbb 757 Pfam PF00384 Molybdopterin oxidoreductase 65 445 6.9E-45 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_04820 b0517084194aa117e58b61e38d336bf6 176 Pfam PF04279 Intracellular septation protein A 5 169 6.9E-7 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Gene3D G3DSA:1.25.40.10 23 105 1.5E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Gene3D G3DSA:1.25.40.10 106 230 7.3E-49 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SUPERFAMILY SSF81901 31 225 4.1E-56 T 12-10-2018 ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Pfam PF08238 Sel1 repeat 186 219 7.1E-11 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Pfam PF08238 Sel1 repeat 149 182 8.7E-8 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Pfam PF08238 Sel1 repeat 112 147 1.9E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Pfam PF08238 Sel1 repeat 78 111 5.9E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 Pfam PF08238 Sel1 repeat 40 74 4.1E-6 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SMART SM00671 76 111 7.6E-11 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SMART SM00671 184 219 1.2E-10 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SMART SM00671 39 75 2.6E-7 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SMART SM00671 148 183 3.6E-9 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_00830 4eea91cef03919fa8f711a7c270baff9 230 SMART SM00671 112 147 6.3E-13 T 12-10-2018 IPR006597 Sel1-like repeat ABD1_17750 2a23070ea5ed7ae11d2d1ca0427201d3 304 Gene3D G3DSA:3.40.50.1820 17 281 1.7E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_17750 2a23070ea5ed7ae11d2d1ca0427201d3 304 SUPERFAMILY SSF53474 14 300 1.17E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_17750 2a23070ea5ed7ae11d2d1ca0427201d3 304 Gene3D G3DSA:1.10.10.800 147 230 1.7E-52 T 12-10-2018 ABD1_17750 2a23070ea5ed7ae11d2d1ca0427201d3 304 Pfam PF12146 Serine aminopeptidase, S33 38 276 2.9E-14 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 PRINTS PR00412 Epoxide hydrolase signature 276 298 9.6E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 PRINTS PR00412 Epoxide hydrolase signature 53 68 9.6E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 PRINTS PR00412 Epoxide hydrolase signature 103 116 9.6E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 PRINTS PR00412 Epoxide hydrolase signature 33 51 9.6E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 SUPERFAMILY SSF53474 3 301 6.21E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 Pfam PF12697 Alpha/beta hydrolase family 29 292 2.5E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_23960 0c3d70f2a4511cea0a952a0438a6913a 306 Gene3D G3DSA:3.40.50.1820 3 297 3.2E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 6.8E-67 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 Gene3D G3DSA:3.10.180.10 1 132 4.0E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-24 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ABD1_24150 e9e0cec8f0fd8e4c904592f27d46cbb5 133 SUPERFAMILY SSF54593 1 126 1.88E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_11750 a68bacd8820d9a8e38a8b737d1e0428e 168 Pfam PF08875 Domain of unknown function (DUF1833) 19 142 7.5E-8 T 12-10-2018 IPR014974 Domain of unknown function DUF1833 ABD1_10450 a68bacd8820d9a8e38a8b737d1e0428e 168 Pfam PF08875 Domain of unknown function (DUF1833) 19 142 7.5E-8 T 12-10-2018 IPR014974 Domain of unknown function DUF1833 ABD1_17800 6a5f599bca6dc3110fdd1eb72f1dc627 340 SUPERFAMILY SSF56281 1 297 7.73E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_17800 6a5f599bca6dc3110fdd1eb72f1dc627 340 Pfam PF16661 Metallo-beta-lactamase superfamily domain 17 75 1.2E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_25070 6818fb25c76da6e571749a63aac34544 124 Pfam PF16137 Domain of unknown function (DUF4845) 30 112 2.2E-15 T 12-10-2018 IPR032314 Protein of unknown function DUF4845 ABD1_10040 7bfe04eeee5f7a5d1ddac7a8ff081ee0 118 SUPERFAMILY SSF47413 9 89 2.61E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_18080 01bdabd4127c416a05e4935ba9a045c8 270 Pfam PF01925 Sulfite exporter TauE/SafE 6 265 2.8E-35 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_22360 e0cb855e154d438d334d3e918a21bc3a 224 Pfam PF00069 Protein kinase domain 66 213 1.4E-14 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABD1_22360 e0cb855e154d438d334d3e918a21bc3a 224 Gene3D G3DSA:1.10.510.10 65 223 7.4E-21 T 12-10-2018 ABD1_22360 e0cb855e154d438d334d3e918a21bc3a 224 SUPERFAMILY SSF56112 6 219 1.52E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_02330 caa821a3608db78cb3c07dee1a91d11c 270 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 207 256 1.0E-9 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 ABD1_02330 caa821a3608db78cb3c07dee1a91d11c 270 Gene3D G3DSA:3.60.21.10 2 267 1.5E-63 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_02330 caa821a3608db78cb3c07dee1a91d11c 270 SUPERFAMILY SSF56300 15 265 3.11E-55 T 12-10-2018 ABD1_02330 caa821a3608db78cb3c07dee1a91d11c 270 Pfam PF00149 Calcineurin-like phosphoesterase 14 202 9.0E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_02330 caa821a3608db78cb3c07dee1a91d11c 270 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 256 37.573 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 1.8E-18 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 Gene3D G3DSA:2.60.300.12 6 111 9.7E-33 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 SUPERFAMILY SSF89360 3 97 2.75E-30 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 33.22 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 ABD1_00110 21976ca6c407689c4cfb22c30d37a956 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 110 1.8E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ABD1_21830 ab052b66a5aee8ee33c5dd6f2e46ea8a 280 Pfam PF11906 Protein of unknown function (DUF3426) 138 277 2.5E-15 T 12-10-2018 IPR021834 Protein of unknown function DUF3426 ABD1_21830 ab052b66a5aee8ee33c5dd6f2e46ea8a 280 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 2.4E-8 T 12-10-2018 IPR011723 Zinc finger/thioredoxin putative ABD1_31120 cd622d2b4ec34ac637d87d72dde48e32 143 Pfam PF00583 Acetyltransferase (GNAT) family 15 124 6.2E-20 T 12-10-2018 IPR000182 GNAT domain ABD1_31120 cd622d2b4ec34ac637d87d72dde48e32 143 Gene3D G3DSA:3.40.630.30 3 143 1.3E-40 T 12-10-2018 ABD1_31120 cd622d2b4ec34ac637d87d72dde48e32 143 SUPERFAMILY SSF55729 1 129 9.81E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_25440 42561ba5e16dbedcbf854eb88ad898d4 150 TIGRFAM TIGR02801 tolR: protein TolR 17 147 5.3E-44 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 ABD1_25440 42561ba5e16dbedcbf854eb88ad898d4 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 147 27.502 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 ABD1_25440 42561ba5e16dbedcbf854eb88ad898d4 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 148 1.9E-29 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABD1_25440 42561ba5e16dbedcbf854eb88ad898d4 150 Gene3D G3DSA:3.30.420.270 65 144 1.4E-12 T 12-10-2018 ABD1_06290 eb836d8c4772a4ad22a90c3024669a90 299 Pfam PF04333 MlaA lipoprotein 76 266 1.4E-62 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABD1_06290 eb836d8c4772a4ad22a90c3024669a90 299 PRINTS PR01805 VacJ lipoprotein signature 180 197 2.3E-18 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABD1_06290 eb836d8c4772a4ad22a90c3024669a90 299 PRINTS PR01805 VacJ lipoprotein signature 94 110 2.3E-18 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABD1_06290 eb836d8c4772a4ad22a90c3024669a90 299 PRINTS PR01805 VacJ lipoprotein signature 77 90 2.3E-18 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABD1_06290 eb836d8c4772a4ad22a90c3024669a90 299 PRINTS PR01805 VacJ lipoprotein signature 145 162 2.3E-18 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABD1_20330 9df5d82bd8ce0ae65a95a48589037c98 336 Pfam PF13379 NMT1-like family 3 248 2.4E-53 T 12-10-2018 ABD1_20330 9df5d82bd8ce0ae65a95a48589037c98 336 Gene3D G3DSA:3.40.190.10 95 210 1.8E-76 T 12-10-2018 ABD1_20330 9df5d82bd8ce0ae65a95a48589037c98 336 Gene3D G3DSA:3.40.190.10 11 334 1.8E-76 T 12-10-2018 ABD1_20330 9df5d82bd8ce0ae65a95a48589037c98 336 SUPERFAMILY SSF53850 8 262 3.8E-15 T 12-10-2018 ABD1_31430 42f9fc0a212089a27f7c97707f180a4a 104 SUPERFAMILY SSF46785 4 96 2.35E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_31430 42f9fc0a212089a27f7c97707f180a4a 104 Gene3D G3DSA:1.10.10.10 2 104 8.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_31430 42f9fc0a212089a27f7c97707f180a4a 104 Pfam PF01638 HxlR-like helix-turn-helix 16 98 1.1E-30 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 SUPERFAMILY SSF56042 176 342 8.07E-63 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 2.6E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 Gene3D G3DSA:3.30.1330.10 11 175 7.5E-67 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.75 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 Gene3D G3DSA:3.90.650.10 176 347 2.8E-69 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 2.0E-145 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 SUPERFAMILY SSF55326 12 175 9.87E-52 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABD1_25580 4dd0a2175073fc9dc015bc27983bc37e 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 8.4E-38 T 12-10-2018 IPR010918 PurM-like, C-terminal domain ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:2.20.28.60 2 52 6.9E-24 T 12-10-2018 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 167 180 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 360 376 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 244 272 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 297 317 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 380 394 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 222 237 3.3E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:1.10.580.10 59 411 1.4E-145 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 SUPERFAMILY SSF48256 6 422 5.89E-165 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 2.4E-242 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 PIRSF PIRSF001369 40 424 2.0E-170 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 2.3E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 ABD1_26580 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:1.10.230.10 271 377 1.4E-145 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABD1_17880 bb49908974be2089d2c675af7e24f23a 442 Pfam PF02321 Outer membrane efflux protein 243 419 9.2E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_17880 bb49908974be2089d2c675af7e24f23a 442 Pfam PF02321 Outer membrane efflux protein 33 223 9.0E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABD1_17880 bb49908974be2089d2c675af7e24f23a 442 Gene3D G3DSA:1.20.1600.10 31 440 5.0E-72 T 12-10-2018 ABD1_17880 bb49908974be2089d2c675af7e24f23a 442 SUPERFAMILY SSF56954 5 427 4.05E-76 T 12-10-2018 ABD1_06540 328552a334173eac236ac2039b6313de 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 1.4E-50 T 12-10-2018 ABD1_06540 328552a334173eac236ac2039b6313de 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 2.6E-51 T 12-10-2018 IPR000150 Cof family GO:0016787 ABD1_06540 328552a334173eac236ac2039b6313de 273 SUPERFAMILY SSF56784 1 263 1.72E-57 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_06540 328552a334173eac236ac2039b6313de 273 Gene3D G3DSA:3.40.50.1000 7 262 4.1E-69 T 12-10-2018 IPR023214 HAD superfamily ABD1_06540 328552a334173eac236ac2039b6313de 273 Gene3D G3DSA:3.30.1240.10 83 192 4.1E-69 T 12-10-2018 ABD1_06540 328552a334173eac236ac2039b6313de 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 5.1E-17 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABD1_01950 bf0e3e50c6d75f7e1bb0f9d3141df278 132 Pfam PF01124 MAPEG family 7 129 1.2E-23 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ABD1_01950 bf0e3e50c6d75f7e1bb0f9d3141df278 132 SUPERFAMILY SSF161084 7 129 5.49E-28 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ABD1_01950 bf0e3e50c6d75f7e1bb0f9d3141df278 132 Gene3D G3DSA:1.20.120.550 4 131 2.9E-17 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ABD1_31560 729e85b3a67465b5c843d74a20d80f6f 299 SUPERFAMILY SSF103481 45 152 1.7E-7 T 12-10-2018 ABD1_31560 729e85b3a67465b5c843d74a20d80f6f 299 Pfam PF00892 EamA-like transporter family 157 289 6.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_31560 729e85b3a67465b5c843d74a20d80f6f 299 Pfam PF00892 EamA-like transporter family 6 149 1.4E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_31560 729e85b3a67465b5c843d74a20d80f6f 299 SUPERFAMILY SSF103481 193 294 1.2E-15 T 12-10-2018 ABD1_32620 b2667bdf8d7886ac0888d4aebb0aefde 241 Gene3D G3DSA:2.30.30.40 28 91 1.1E-6 T 12-10-2018 ABD1_09320 548d09adc02c7d4b17cc80121a404842 205 Gene3D G3DSA:1.20.1540.10 3 193 2.4E-26 T 12-10-2018 IPR035952 Rhomboid-like superfamily ABD1_09320 548d09adc02c7d4b17cc80121a404842 205 Pfam PF01694 Rhomboid family 41 189 4.5E-24 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABD1_09320 548d09adc02c7d4b17cc80121a404842 205 SUPERFAMILY SSF144091 7 191 3.4E-34 T 12-10-2018 ABD1_32510 7c786b67de9a0f7ecad2946d560e7c2a 241 Gene3D G3DSA:2.40.230.20 17 235 3.4E-23 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 ABD1_32510 7c786b67de9a0f7ecad2946d560e7c2a 241 SUPERFAMILY SSF111364 25 241 4.32E-63 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 ABD1_32510 7c786b67de9a0f7ecad2946d560e7c2a 241 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 48 191 2.3E-10 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 ABD1_29160 25970bc3d1aa4d8e9a6582ca312ee2b3 253 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 166 243 2.5E-13 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 ABD1_29160 25970bc3d1aa4d8e9a6582ca312ee2b3 253 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 168 244 2.7E-13 T 12-10-2018 IPR006260 TonB/TolA, C-terminal ABD1_29160 25970bc3d1aa4d8e9a6582ca312ee2b3 253 SUPERFAMILY SSF74653 147 246 4.58E-17 T 12-10-2018 ABD1_30300 7eaf69446f4fbb01d6864a8d6226501b 191 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 190 4.7E-32 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABD1_30300 7eaf69446f4fbb01d6864a8d6226501b 191 SUPERFAMILY SSF49329 46 191 6.41E-45 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABD1_30300 7eaf69446f4fbb01d6864a8d6226501b 191 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 179 190 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABD1_30300 7eaf69446f4fbb01d6864a8d6226501b 191 Gene3D G3DSA:2.60.40.200 40 191 3.0E-49 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABD1_30300 7eaf69446f4fbb01d6864a8d6226501b 191 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 85 95 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABD1_05720 4b7f0c0028ca82d1833c1edd5b1cc32c 308 Gene3D G3DSA:1.10.3730.20 223 308 3.3E-5 T 12-10-2018 ABD1_05720 4b7f0c0028ca82d1833c1edd5b1cc32c 308 Pfam PF00892 EamA-like transporter family 10 147 7.6E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_05720 4b7f0c0028ca82d1833c1edd5b1cc32c 308 Pfam PF00892 EamA-like transporter family 162 300 1.5E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_05720 4b7f0c0028ca82d1833c1edd5b1cc32c 308 SUPERFAMILY SSF103481 220 305 9.29E-14 T 12-10-2018 ABD1_05720 4b7f0c0028ca82d1833c1edd5b1cc32c 308 SUPERFAMILY SSF103481 47 151 2.48E-14 T 12-10-2018 ABD1_23440 603b28b80188e6e55d1333c57e0e68cb 147 Gene3D G3DSA:3.40.960.10 41 146 2.7E-9 T 12-10-2018 ABD1_23440 603b28b80188e6e55d1333c57e0e68cb 147 Pfam PF10881 Protein of unknown function (DUF2726) 38 146 5.4E-17 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 ABD1_01180 2058f0896d6cb879ccb9509a08b82c0e 629 Gene3D G3DSA:3.30.300.30 455 584 7.5E-33 T 12-10-2018 ABD1_01180 2058f0896d6cb879ccb9509a08b82c0e 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 12-10-2018 IPR020845 AMP-binding, conserved site ABD1_01180 2058f0896d6cb879ccb9509a08b82c0e 629 Gene3D G3DSA:3.40.50.12780 1 454 5.2E-136 T 12-10-2018 ABD1_01180 2058f0896d6cb879ccb9509a08b82c0e 629 Pfam PF00501 AMP-binding enzyme 14 461 2.8E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABD1_01180 2058f0896d6cb879ccb9509a08b82c0e 629 SUPERFAMILY SSF56801 8 563 3.79E-108 T 12-10-2018 ABD1_07900 d103af67daf4d13c38bd12443a4f8063 385 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 252 35.631 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD ABD1_07900 d103af67daf4d13c38bd12443a4f8063 385 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 254 1.4E-76 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD ABD1_07900 d103af67daf4d13c38bd12443a4f8063 385 SUPERFAMILY SSF48452 43 122 1.94E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07900 d103af67daf4d13c38bd12443a4f8063 385 Gene3D G3DSA:1.25.40.10 40 261 5.9E-52 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07900 d103af67daf4d13c38bd12443a4f8063 385 Pfam PF13525 Outer membrane lipoprotein 39 243 5.7E-61 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like ABD1_23880 c5a28b217ebcb58e61c1dee1f70cf08d 322 Gene3D G3DSA:3.40.50.1100 17 312 9.0E-121 T 12-10-2018 ABD1_23880 c5a28b217ebcb58e61c1dee1f70cf08d 322 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABD1_23880 c5a28b217ebcb58e61c1dee1f70cf08d 322 SUPERFAMILY SSF53686 8 316 2.62E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_23880 c5a28b217ebcb58e61c1dee1f70cf08d 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 308 7.2E-79 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_23880 c5a28b217ebcb58e61c1dee1f70cf08d 322 Gene3D G3DSA:3.40.50.1100 55 151 9.0E-121 T 12-10-2018 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 Gene3D G3DSA:3.40.50.20 1 101 3.0E-27 T 12-10-2018 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.213 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 1.2E-113 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 SUPERFAMILY SSF56059 97 295 4.07E-63 T 12-10-2018 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 Gene3D G3DSA:3.30.1490.20 102 176 1.2E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 SUPERFAMILY SSF51246 299 363 5.96E-16 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 Pfam PF02222 ATP-grasp domain 106 275 1.5E-56 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 SUPERFAMILY SSF52440 3 96 1.14E-16 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABD1_33780 acf028d8b972ccfa05c998b9dffc4ed9 373 Gene3D G3DSA:3.30.470.20 177 366 8.0E-70 T 12-10-2018 ABD1_08350 068e7e95a1c49af6b34da7f4838c41d1 260 Gene3D G3DSA:3.40.630.30 32 194 3.0E-16 T 12-10-2018 ABD1_08350 068e7e95a1c49af6b34da7f4838c41d1 260 Pfam PF13444 Acetyltransferase (GNAT) domain 45 140 2.4E-16 T 12-10-2018 ABD1_08350 068e7e95a1c49af6b34da7f4838c41d1 260 SUPERFAMILY SSF55729 25 229 1.11E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_23820 fbe676fbc71f573d31a02f81ade27327 315 Gene3D G3DSA:1.10.3470.10 2 314 1.9E-39 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_23820 fbe676fbc71f573d31a02f81ade27327 315 SUPERFAMILY SSF81345 3 310 2.09E-43 T 12-10-2018 IPR037294 ABC transporter, BtuC-like ABD1_23820 fbe676fbc71f573d31a02f81ade27327 315 Pfam PF01032 FecCD transport family 29 310 3.6E-36 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABD1_09590 cfa16ef0a1e00f081d102d3729860c30 445 TIGRFAM TIGR00784 citMHS: citrate transporter 1 439 1.9E-171 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 ABD1_09590 cfa16ef0a1e00f081d102d3729860c30 445 Pfam PF03600 Citrate transporter 13 387 2.6E-50 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABD1_12140 7271032e79940c6c55d7ad388d9d6694 71 Pfam PF13619 KTSC domain 6 56 5.0E-8 T 12-10-2018 IPR025309 KTSC domain ABD1_15900 f3caf10b5b1195b13396ad5ebc006f9f 137 Gene3D G3DSA:3.30.420.270 64 133 3.5E-8 T 12-10-2018 ABD1_15900 f3caf10b5b1195b13396ad5ebc006f9f 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 3.5E-23 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABD1_18880 78556e1536441e9880347098a19f32db 155 Gene3D G3DSA:1.10.10.10 3 152 1.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_18880 78556e1536441e9880347098a19f32db 155 SMART SM00347 38 138 1.8E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_18880 78556e1536441e9880347098a19f32db 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 3.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_18880 78556e1536441e9880347098a19f32db 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 3.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_18880 78556e1536441e9880347098a19f32db 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 3.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_18880 78556e1536441e9880347098a19f32db 155 SUPERFAMILY SSF46785 17 152 1.03E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_18880 78556e1536441e9880347098a19f32db 155 Pfam PF01047 MarR family 58 102 1.4E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 SUPERFAMILY SSF52317 290 542 7.74E-84 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 Pfam PF00117 Glutamine amidotransferase class-I 302 536 3.0E-59 T 12-10-2018 IPR017926 Glutamine amidotransferase ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 1.0E-242 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 Gene3D G3DSA:3.40.50.300 1 285 1.2E-122 T 12-10-2018 ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 Pfam PF06418 CTP synthase N-terminus 4 264 1.5E-118 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 Hamap MF_01227 CTP synthase [pyrG]. 2 541 49.359 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 SUPERFAMILY SSF52540 1 267 2.13E-114 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_19190 01bf61b840e0d3fcdadcae30b7fd12b1 545 Gene3D G3DSA:3.40.50.880 287 545 5.4E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_18530 04f37ce62deaa58df9a50e5fed366851 230 Pfam PF01965 DJ-1/PfpI family 28 226 1.2E-15 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABD1_18530 04f37ce62deaa58df9a50e5fed366851 230 Gene3D G3DSA:3.40.50.880 2 228 9.3E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_18530 04f37ce62deaa58df9a50e5fed366851 230 SUPERFAMILY SSF52317 1 227 1.7E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_01440 f0d4931514dc2fa242757c1ec0fd759d 306 Pfam PF04261 Dyp-type peroxidase family 27 298 6.1E-70 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABD1_01440 f0d4931514dc2fa242757c1ec0fd759d 306 SUPERFAMILY SSF54909 3 303 1.97E-88 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_01440 f0d4931514dc2fa242757c1ec0fd759d 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 297 6.1E-66 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABD1_31200 e737ea54c16e48b510702ae6935b8527 300 SUPERFAMILY SSF103481 46 144 1.22E-12 T 12-10-2018 ABD1_31200 e737ea54c16e48b510702ae6935b8527 300 Pfam PF00892 EamA-like transporter family 14 141 3.2E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_31200 e737ea54c16e48b510702ae6935b8527 300 Pfam PF00892 EamA-like transporter family 152 283 1.3E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_31200 e737ea54c16e48b510702ae6935b8527 300 SUPERFAMILY SSF103481 187 284 7.06E-10 T 12-10-2018 ABD1_10700 148cfa6ac0089a668f364a3d65c00487 287 SUPERFAMILY SSF53474 29 283 8.04E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_10700 148cfa6ac0089a668f364a3d65c00487 287 Pfam PF07859 alpha/beta hydrolase fold 71 151 7.6E-15 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABD1_10700 148cfa6ac0089a668f364a3d65c00487 287 Gene3D G3DSA:3.40.50.1820 12 274 3.1E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_12480 7e8718575989f945762ddf8adf6434ae 404 Gene3D G3DSA:1.20.1250.20 18 401 3.0E-36 T 12-10-2018 ABD1_12480 7e8718575989f945762ddf8adf6434ae 404 SUPERFAMILY SSF103473 17 402 4.84E-47 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_12480 7e8718575989f945762ddf8adf6434ae 404 Pfam PF07690 Major Facilitator Superfamily 31 250 3.2E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_29810 a34b577e13e911c9eb6ed31e2af2b4ea 211 SUPERFAMILY SSF53271 51 205 1.08E-22 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like ABD1_29810 a34b577e13e911c9eb6ed31e2af2b4ea 211 Gene3D G3DSA:3.40.50.2020 59 210 1.3E-16 T 12-10-2018 ABD1_29810 a34b577e13e911c9eb6ed31e2af2b4ea 211 Pfam PF00156 Phosphoribosyl transferase domain 161 208 9.5E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABD1_22880 7f12834b29c9d93b7d8482eb4ec8b8b5 119 Pfam PF04076 Bacterial OB fold (BOF) protein 31 118 1.5E-23 T 12-10-2018 IPR005220 Bacterial OB-fold ABD1_22880 7f12834b29c9d93b7d8482eb4ec8b8b5 119 SUPERFAMILY SSF101756 31 118 1.03E-25 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily ABD1_22880 7f12834b29c9d93b7d8482eb4ec8b8b5 119 Gene3D G3DSA:2.40.50.200 16 119 3.6E-28 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily ABD1_04810 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Gene3D G3DSA:1.10.1200.10 1 82 8.0E-18 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_04810 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.553 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABD1_04810 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 SUPERFAMILY SSF47336 3 79 2.36E-17 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_04810 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Pfam PF00550 Phosphopantetheine attachment site 10 74 5.2E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_09400 da13a1d9acb717eea2caa24a85fc909f 819 PRINTS PR00173 Glutamate-aspartate symporter signature 304 324 2.4E-5 T 12-10-2018 ABD1_09400 da13a1d9acb717eea2caa24a85fc909f 819 PRINTS PR00173 Glutamate-aspartate symporter signature 401 426 2.4E-5 T 12-10-2018 ABD1_09400 da13a1d9acb717eea2caa24a85fc909f 819 PRINTS PR00173 Glutamate-aspartate symporter signature 687 706 2.4E-5 T 12-10-2018 ABD1_09400 da13a1d9acb717eea2caa24a85fc909f 819 Pfam PF02687 FtsX-like permease family 721 806 6.4E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABD1_33610 db07e7f0d65b03c31b152d658d241f2c 47 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 35 2.5E-11 T 12-10-2018 IPR031596 Putative methionine and alanine importer, small subunit ABD1_07160 1866f1f8f1acc4ac3050cdb956b1e921 498 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 478 1.2E-122 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABD1_07160 1866f1f8f1acc4ac3050cdb956b1e921 498 Pfam PF00361 Proton-conducting membrane transporter 127 423 3.8E-72 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07160 1866f1f8f1acc4ac3050cdb956b1e921 498 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.414 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABD1_27720 4a2342ca894c61150dcf29fa4215471b 307 Pfam PF03547 Membrane transport protein 152 297 5.0E-11 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABD1_27720 4a2342ca894c61150dcf29fa4215471b 307 Pfam PF03547 Membrane transport protein 2 145 4.1E-14 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABD1_18330 40e3a511eeac0257add1e178213372dc 446 Pfam PF07690 Major Facilitator Superfamily 26 394 4.8E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_18330 40e3a511eeac0257add1e178213372dc 446 SUPERFAMILY SSF103473 8 434 4.19E-75 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18330 40e3a511eeac0257add1e178213372dc 446 Gene3D G3DSA:1.20.1250.20 4 439 2.1E-65 T 12-10-2018 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 SUPERFAMILY SSF46785 2 97 8.01E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 Gene3D G3DSA:1.10.10.10 1 92 4.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 6.4E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 SMART SM00418 6 88 7.2E-27 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 6.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 6.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 6.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_14540 46c25c88a9abc02844a676237f3fc8a7 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 6.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABD1_03350 e9b26f6540681737f7c15c77738acd1f 109 Pfam PF13591 MerR HTH family regulatory protein 28 107 4.4E-17 T 12-10-2018 ABD1_03350 e9b26f6540681737f7c15c77738acd1f 109 Gene3D G3DSA:1.10.1660.10 19 109 1.7E-23 T 12-10-2018 ABD1_16520 76f199890be6c1431c070550da122678 510 Pfam PF03929 PepSY-associated TM region 2 350 2.5E-56 T 12-10-2018 IPR005625 PepSY-associated TM protein ABD1_07340 ed99f54e6ddbce7af55577d53bc8a7f3 166 Gene3D G3DSA:1.20.120.20 2 160 1.6E-9 T 12-10-2018 ABD1_07340 ed99f54e6ddbce7af55577d53bc8a7f3 166 SUPERFAMILY SSF58113 4 160 1.31E-7 T 12-10-2018 ABD1_33340 a161ecb8612166e211af0153adb259d7 120 SUPERFAMILY SSF54197 3 116 2.01E-28 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_33340 a161ecb8612166e211af0153adb259d7 120 Pfam PF01230 HIT domain 16 105 3.3E-12 T 12-10-2018 IPR001310 Histidine triad (HIT) protein ABD1_33340 a161ecb8612166e211af0153adb259d7 120 Gene3D G3DSA:3.30.428.10 1 119 1.2E-26 T 12-10-2018 IPR036265 HIT-like superfamily ABD1_31800 5db1bed0a862e0da5cf6fa2bb4b113cb 231 Pfam PF03591 AzlC protein 30 165 2.2E-28 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease ABD1_21780 4705f5bf10a555d1865de8401ebcb1b7 516 Gene3D G3DSA:3.30.1490.270 385 445 1.3E-25 T 12-10-2018 ABD1_21780 4705f5bf10a555d1865de8401ebcb1b7 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 115 489 2.4E-147 T 12-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 ABD1_21780 4705f5bf10a555d1865de8401ebcb1b7 516 PIRSF PIRSF005522 35 516 1.1E-214 T 12-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 ABD1_21780 4705f5bf10a555d1865de8401ebcb1b7 516 Gene3D G3DSA:3.40.50.11290 250 348 4.8E-39 T 12-10-2018 ABD1_21780 4705f5bf10a555d1865de8401ebcb1b7 516 SUPERFAMILY SSF56059 66 504 8.71E-54 T 12-10-2018 ABD1_16040 190e88f70085ab22563b4d218191a92f 244 Gene3D G3DSA:3.40.50.1240 26 225 5.6E-11 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_16040 190e88f70085ab22563b4d218191a92f 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 27 96 4.4E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABD1_16040 190e88f70085ab22563b4d218191a92f 244 SUPERFAMILY SSF53254 27 196 1.13E-14 T 12-10-2018 IPR029033 Histidine phosphatase superfamily ABD1_11140 e77e4f2efc4da99de1400d8f49fd8f36 185 Pfam PF01292 Prokaryotic cytochrome b561 9 181 1.7E-26 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABD1_11140 e77e4f2efc4da99de1400d8f49fd8f36 185 SUPERFAMILY SSF81342 4 181 2.04E-33 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABD1_29700 9bef6c036067945818d6d9fa84b7269a 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 12 514 1.8E-232 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal ABD1_29700 9bef6c036067945818d6d9fa84b7269a 515 SUPERFAMILY SSF52540 3 384 5.95E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_29700 9bef6c036067945818d6d9fa84b7269a 515 Gene3D G3DSA:3.40.50.300 3 173 5.1E-10 T 12-10-2018 ABD1_29700 9bef6c036067945818d6d9fa84b7269a 515 Gene3D G3DSA:3.40.50.300 203 379 2.0E-21 T 12-10-2018 ABD1_15920 86e884af60b81e8d7096191fd54e49fd 293 Pfam PF01618 MotA/TolQ/ExbB proton channel family 164 266 1.5E-34 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABD1_02140 e732e7b5ca83404ac5ac20423919d43f 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 2.0E-94 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 ABD1_02140 e732e7b5ca83404ac5ac20423919d43f 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 348 1.2E-76 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ABD1_20670 9d772300e73764a24c505eb4ed2462c0 147 Pfam PF06271 RDD family 7 140 4.3E-29 T 12-10-2018 IPR010432 RDD ABD1_11900 c76c1fdd1969ae4eb23ab45f1df5f075 261 Pfam PF01435 Peptidase family M48 77 248 4.1E-33 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABD1_30280 5d8cf08e3a355b070b10c455368282b2 198 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 2 143 2.6E-8 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ABD1_30280 5d8cf08e3a355b070b10c455368282b2 198 SUPERFAMILY SSF52540 2 189 1.91E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_30280 5d8cf08e3a355b070b10c455368282b2 198 PIRSF PIRSF009320 2 192 7.1E-21 T 12-10-2018 ABD1_30280 5d8cf08e3a355b070b10c455368282b2 198 Gene3D G3DSA:3.40.50.300 1 192 5.6E-32 T 12-10-2018 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 11 191 9.5E-29 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 Pfam PF12833 Helix-turn-helix domain 244 321 4.2E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 SMART SM00342 238 320 1.3E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 Gene3D G3DSA:1.10.10.60 220 327 5.8E-25 T 12-10-2018 ABD1_23930 4a8142ca2aa68fb85470d80513bd470e 327 SUPERFAMILY SSF46689 273 321 1.3E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_23650 a3be27ba1a69819399278d822e6e708f 264 Pfam PF05675 Protein of unknown function (DUF817) 9 245 1.2E-81 T 12-10-2018 IPR008535 Protein of unknown function DUF817 ABD1_23650 a3be27ba1a69819399278d822e6e708f 264 PIRSF PIRSF009141 2 260 1.4E-73 T 12-10-2018 IPR008535 Protein of unknown function DUF817 ABD1_06460 1d64b927fa31f6b1f28628c392038b0d 205 SUPERFAMILY SSF55811 24 177 5.69E-29 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABD1_06460 1d64b927fa31f6b1f28628c392038b0d 205 Pfam PF00293 NUDIX domain 24 138 7.4E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABD1_06460 1d64b927fa31f6b1f28628c392038b0d 205 Gene3D G3DSA:3.90.79.10 2 181 1.2E-44 T 12-10-2018 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 SUPERFAMILY SSF51735 2 160 3.94E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 SUPERFAMILY SSF48179 162 288 5.67E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 Gene3D G3DSA:1.10.1040.10 162 289 4.1E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 1.0E-46 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 6.2E-29 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 Gene3D G3DSA:3.40.50.720 1 161 4.6E-48 T 12-10-2018 ABD1_18160 f69c3f770824f4aacb2d6afb0c25d7d1 290 PIRSF PIRSF000103 1 290 1.2E-72 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:3.40.50.12160 5 125 1.7E-28 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 SUPERFAMILY SSF102114 121 367 8.24E-53 T 12-10-2018 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Pfam PF04055 Radical SAM superfamily 143 320 9.5E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 SMART SM00729 137 362 3.7E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 61.309 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 4.2E-104 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 95 9.7E-21 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:2.40.50.140 377 446 1.9E-19 T 12-10-2018 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 8.9E-181 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ABD1_20020 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:3.80.30.20 135 376 4.9E-72 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABD1_33910 9a58ceb378ce6f912967aa51eaa3ffdc 83 Pfam PF04226 Transglycosylase associated protein 34 81 5.7E-13 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 ABD1_06190 e4cebe7da8932952ad9d1f359335ecb5 927 Pfam PF10101 Predicted membrane protein (DUF2339) 180 914 1.5E-96 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane ABD1_28310 fa484bd6304e4fc34c5bd4eb5ed8e4e8 128 PIRSF PIRSF029598 2 108 1.2E-30 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 ABD1_28310 fa484bd6304e4fc34c5bd4eb5ed8e4e8 128 Pfam PF06146 Phosphate-starvation-inducible E 22 90 2.1E-17 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like ABD1_07610 f865e3298b504335a7c6264efd223826 244 SUPERFAMILY SSF53474 7 238 5.35E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_07610 f865e3298b504335a7c6264efd223826 244 Gene3D G3DSA:3.40.50.1820 46 238 5.5E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_06270 9ef5c83bcf1595b50b7e9d034499bb08 173 Pfam PF01740 STAS domain 12 102 4.1E-5 T 12-10-2018 IPR002645 STAS domain ABD1_06270 9ef5c83bcf1595b50b7e9d034499bb08 173 Gene3D G3DSA:3.30.750.24 4 108 4.8E-12 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_06270 9ef5c83bcf1595b50b7e9d034499bb08 173 SUPERFAMILY SSF52091 8 105 5.1E-13 T 12-10-2018 IPR036513 STAS domain superfamily ABD1_14520 0318fe6cc58a17b83069d855c063ab59 53 TIGRFAM TIGR03510 XapX: XapX domain 4 49 6.5E-20 T 12-10-2018 IPR020017 XapX domain ABD1_14520 0318fe6cc58a17b83069d855c063ab59 53 Pfam PF07235 Protein of unknown function (DUF1427) 2 51 1.4E-23 T 12-10-2018 IPR009872 Protein of unknown function DUF1427 ABD1_28410 e0401060be403b443ff5da420cc6ded7 271 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 6 186 4.2E-22 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 ABD1_20450 54308753679090c83ad2606207747e63 376 Pfam PF02698 DUF218 domain 212 359 3.3E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 ABD1_31820 af60a220c89c3a5b707b763ef9428954 193 SUPERFAMILY SSF50249 2 193 8.57E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABD1_31820 af60a220c89c3a5b707b763ef9428954 193 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 34.897 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABD1_31820 af60a220c89c3a5b707b763ef9428954 193 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 193 2.0E-50 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABD1_31820 af60a220c89c3a5b707b763ef9428954 193 Gene3D G3DSA:2.40.50.140 1 122 2.2E-43 T 12-10-2018 ABD1_31820 af60a220c89c3a5b707b763ef9428954 193 Pfam PF00436 Single-strand binding protein family 4 108 2.7E-38 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ABD1_30290 6f0fed2b501707d09a97c8f37035255f 372 Pfam PF01594 AI-2E family transporter 12 344 1.2E-44 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like ABD1_24330 4fc85a8497a2c355125a31180582a6ed 465 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 462 6.0E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_24330 4fc85a8497a2c355125a31180582a6ed 465 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 222 462 4.1E-64 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ABD1_24330 4fc85a8497a2c355125a31180582a6ed 465 SUPERFAMILY SSF161098 240 451 1.57E-35 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_24330 4fc85a8497a2c355125a31180582a6ed 465 Pfam PF11812 Domain of unknown function (DUF3333) 32 196 2.2E-43 T 12-10-2018 IPR024573 Domain of unknown function DUF3333 ABD1_24330 4fc85a8497a2c355125a31180582a6ed 465 Gene3D G3DSA:1.10.3720.10 237 463 4.8E-34 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_00570 3626f118758697f356dfb79be52514b8 381 SUPERFAMILY SSF53756 7 374 2.77E-40 T 12-10-2018 ABD1_00570 3626f118758697f356dfb79be52514b8 381 Pfam PF00534 Glycosyl transferases group 1 190 351 2.0E-19 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 ABD1_00570 3626f118758697f356dfb79be52514b8 381 Gene3D G3DSA:3.40.50.2000 175 355 1.3E-28 T 12-10-2018 ABD1_09110 b57b0a27ce4ce72c25442b24aacc4c1a 398 SUPERFAMILY SSF56935 38 369 1.6E-8 T 12-10-2018 ABD1_11120 6a7b4955962e3c85bac54e639f7c2e35 439 Pfam PF00860 Permease family 27 398 6.6E-56 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABD1_11120 6a7b4955962e3c85bac54e639f7c2e35 439 PIRSF PIRSF005353 1 438 7.9E-185 T 12-10-2018 IPR026033 Purine permease PbuG-like ABD1_10950 c97f603ed9eab47e235ee908f4cb5837 431 Gene3D G3DSA:1.20.1740.10 1 430 1.1E-58 T 12-10-2018 ABD1_10950 c97f603ed9eab47e235ee908f4cb5837 431 ProSitePatterns PS00218 Amino acid permeases signature. 20 50 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABD1_10950 c97f603ed9eab47e235ee908f4cb5837 431 Pfam PF00324 Amino acid permease 1 399 2.0E-109 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_10950 c97f603ed9eab47e235ee908f4cb5837 431 PIRSF PIRSF006060 1 431 3.0E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_28150 2b9bca16384834d3953488b3a561c676 291 Pfam PF10118 Predicted metal-dependent hydrolase 15 260 1.3E-73 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_28150 2b9bca16384834d3953488b3a561c676 291 SUPERFAMILY SSF47240 5 195 4.96E-8 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_28150 2b9bca16384834d3953488b3a561c676 291 PIRSF PIRSF007580 2 278 9.4E-66 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Gene3D G3DSA:3.40.50.10490 247 611 4.7E-144 T 12-10-2018 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Pfam PF01380 SIS domain 288 420 1.1E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Pfam PF01380 SIS domain 466 594 7.1E-29 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 SUPERFAMILY SSF56235 2 222 1.89E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.313 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 SUPERFAMILY SSF53697 244 612 2.5E-108 T 12-10-2018 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 2.0E-253 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Pfam PF13522 Glutamine amidotransferase domain 62 180 6.8E-22 T 12-10-2018 ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Gene3D G3DSA:3.60.20.10 2 238 9.3E-77 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABD1_32970 f830a99aede3f5a2abdf3e11f8f2900d 612 Gene3D G3DSA:3.40.50.10490 450 597 4.7E-144 T 12-10-2018 ABD1_04890 955228c0d2598007b6bf64245bcc435e 760 SUPERFAMILY SSF82866 171 388 2.62E-17 T 12-10-2018 ABD1_04890 955228c0d2598007b6bf64245bcc435e 760 SUPERFAMILY SSF82866 603 748 3.4E-22 T 12-10-2018 ABD1_00210 02eb3d0833bfc87cb1f6058628a466d4 351 Gene3D G3DSA:1.50.10.150 1 340 2.0E-14 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily ABD1_00210 02eb3d0833bfc87cb1f6058628a466d4 351 Pfam PF03595 Voltage-dependent anion channel 1 329 7.6E-73 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 113 1.5E-25 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 Pfam PF03061 Thioesterase superfamily 19 101 2.6E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 PIRSF PIRSF003230 1 135 1.4E-51 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 Gene3D G3DSA:3.10.129.10 1 130 1.5E-39 T 12-10-2018 ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 SUPERFAMILY SSF54637 2 129 1.94E-37 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_25420 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 2.0E-45 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 ABD1_28840 0a49036f1da3a0c96ed4f1585b290037 224 Pfam PF04172 LrgB-like family 11 218 5.7E-51 T 12-10-2018 IPR007300 CidB/LrgB family ABD1_22150 1a8440be75a8f5a225081717ec3916ab 178 Pfam PF05229 Spore Coat Protein U domain 26 175 3.0E-23 T 12-10-2018 IPR007893 Spore coat protein U ABD1_22150 1a8440be75a8f5a225081717ec3916ab 178 SMART SM00972 117 175 6.6E-14 T 12-10-2018 IPR007893 Spore coat protein U ABD1_18400 93ab67f40a6e048a407750e1db2db3ab 300 Gene3D G3DSA:1.20.1530.20 2 288 2.0E-73 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_18400 93ab67f40a6e048a407750e1db2db3ab 300 Pfam PF01758 Sodium Bile acid symporter family 11 194 1.6E-32 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABD1_16640 f747430a74b3543b3da535472fb34ce4 368 Gene3D G3DSA:2.40.160.10 8 368 2.2E-50 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_16640 f747430a74b3543b3da535472fb34ce4 368 Pfam PF13609 Gram-negative porin 7 349 2.4E-30 T 12-10-2018 ABD1_16640 f747430a74b3543b3da535472fb34ce4 368 SUPERFAMILY SSF56935 19 368 1.42E-44 T 12-10-2018 ABD1_28190 d98e369f5e659de6a69abee90f4f5766 219 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 9 216 40.257 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABD1_28190 d98e369f5e659de6a69abee90f4f5766 219 SUPERFAMILY SSF51366 10 213 3.3E-62 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABD1_28190 d98e369f5e659de6a69abee90f4f5766 219 Gene3D G3DSA:3.20.20.70 7 218 1.1E-67 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_28190 d98e369f5e659de6a69abee90f4f5766 219 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 1.1E-60 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABD1_03740 5fa86d3ab5343dcf44abc2899df106ca 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.7E-34 T 12-10-2018 ABD1_03740 5fa86d3ab5343dcf44abc2899df106ca 224 Gene3D G3DSA:1.10.150.240 20 83 1.2E-49 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABD1_03740 5fa86d3ab5343dcf44abc2899df106ca 224 Gene3D G3DSA:3.40.50.1000 8 204 1.2E-49 T 12-10-2018 IPR023214 HAD superfamily ABD1_03740 5fa86d3ab5343dcf44abc2899df106ca 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 76 177 3.6E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABD1_03740 5fa86d3ab5343dcf44abc2899df106ca 224 SUPERFAMILY SSF56784 4 215 5.19E-56 T 12-10-2018 IPR036412 HAD-like superfamily ABD1_25740 999563d410a408fba300ead4e610dbde 363 Pfam PF12698 ABC-2 family transporter protein 19 355 1.9E-36 T 12-10-2018 ABD1_18130 a48854c46e039a5c34df361837343177 339 Gene3D G3DSA:3.40.50.1980 20 339 7.4E-60 T 12-10-2018 ABD1_18130 a48854c46e039a5c34df361837343177 339 SUPERFAMILY SSF53807 38 313 3.92E-47 T 12-10-2018 ABD1_18130 a48854c46e039a5c34df361837343177 339 Pfam PF01497 Periplasmic binding protein 53 285 2.3E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain ABD1_25990 6ee7b22fef9098f2f1638806142a62d4 178 SUPERFAMILY SSF46689 2 53 2.57E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_25990 6ee7b22fef9098f2f1638806142a62d4 178 Gene3D G3DSA:1.10.357.10 1 170 6.2E-16 T 12-10-2018 ABD1_25990 6ee7b22fef9098f2f1638806142a62d4 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 38 1.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_25990 6ee7b22fef9098f2f1638806142a62d4 178 ProSitePatterns PS01081 TetR-type HTH domain signature. 4 34 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_25190 b4c2b456773be9e99d0a8cad4b37ce8c 202 Gene3D G3DSA:3.40.50.1820 1 181 5.2E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_25190 b4c2b456773be9e99d0a8cad4b37ce8c 202 SUPERFAMILY SSF53474 3 179 2.84E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_25190 b4c2b456773be9e99d0a8cad4b37ce8c 202 Pfam PF06821 Serine hydrolase 4 177 2.5E-52 T 12-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 ABD1_24070 40488ee1db4c7f523bbb8a7a25e020b1 100 Pfam PF04328 Selenoprotein, putative 36 100 3.3E-23 T 12-10-2018 IPR007423 Selenoprotein, putative ABD1_01470 17160e10ddeb84abab4bbbce5067c829 259 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABD1_01470 17160e10ddeb84abab4bbbce5067c829 259 Gene3D G3DSA:3.40.50.300 4 238 1.9E-56 T 12-10-2018 ABD1_01470 17160e10ddeb84abab4bbbce5067c829 259 Pfam PF00005 ABC transporter 26 153 2.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_01470 17160e10ddeb84abab4bbbce5067c829 259 SMART SM00382 35 210 9.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_01470 17160e10ddeb84abab4bbbce5067c829 259 SUPERFAMILY SSF52540 6 222 1.56E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_09220 5e7035de1aa05c12e9af0c5c4d4dac9c 433 Pfam PF07690 Major Facilitator Superfamily 29 389 7.5E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_09220 5e7035de1aa05c12e9af0c5c4d4dac9c 433 SUPERFAMILY SSF103473 8 427 1.83E-81 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_09220 5e7035de1aa05c12e9af0c5c4d4dac9c 433 Gene3D G3DSA:1.20.1250.20 6 430 2.0E-81 T 12-10-2018 ABD1_29110 ac464e078948f08421eb7cf43f65f399 220 Pfam PF00445 Ribonuclease T2 family 42 197 4.2E-5 T 12-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 ABD1_29110 ac464e078948f08421eb7cf43f65f399 220 Gene3D G3DSA:3.90.730.10 28 219 2.6E-10 T 12-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 ABD1_29110 ac464e078948f08421eb7cf43f65f399 220 SUPERFAMILY SSF55895 36 216 3.27E-17 T 12-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 ABD1_29780 4db1eb0ff2b5abd718f88007f692dd3d 306 SUPERFAMILY SSF53850 22 227 6.75E-9 T 12-10-2018 ABD1_29780 4db1eb0ff2b5abd718f88007f692dd3d 306 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 174 1.7E-4 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 ABD1_29780 4db1eb0ff2b5abd718f88007f692dd3d 306 Gene3D G3DSA:3.40.190.170 25 246 1.7E-15 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABD1_01730 797993c38f92936a3060016c31b656b9 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.7E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_01730 797993c38f92936a3060016c31b656b9 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABD1_01730 797993c38f92936a3060016c31b656b9 198 SUPERFAMILY SSF46689 2 82 2.64E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_01730 797993c38f92936a3060016c31b656b9 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_01730 797993c38f92936a3060016c31b656b9 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_01730 797993c38f92936a3060016c31b656b9 198 Gene3D G3DSA:1.10.357.10 13 198 5.5E-24 T 12-10-2018 ABD1_10490 fad83ead6f702f5c824504a0a04a34ef 181 SUPERFAMILY SSF53955 1 179 2.81E-46 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily ABD1_10490 fad83ead6f702f5c824504a0a04a34ef 181 Gene3D G3DSA:1.20.141.10 2 180 2.2E-42 T 12-10-2018 ABD1_10490 fad83ead6f702f5c824504a0a04a34ef 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.6E-23 T 12-10-2018 IPR008565 Protein of unknown function DUF847 ABD1_10490 fad83ead6f702f5c824504a0a04a34ef 181 Pfam PF09374 Predicted Peptidoglycan domain 97 179 1.7E-16 T 12-10-2018 IPR018537 Peptidoglycan binding domain ABD1_10030 e1c0b735dea240fbf2fa6eab694b0663 66 Gene3D G3DSA:1.10.260.40 2 62 1.3E-6 T 12-10-2018 ABD1_10030 e1c0b735dea240fbf2fa6eab694b0663 66 Pfam PF01381 Helix-turn-helix 11 52 1.1E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABD1_10030 e1c0b735dea240fbf2fa6eab694b0663 66 SUPERFAMILY SSF47413 10 41 2.82E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 SUPERFAMILY SSF109604 337 489 1.57E-15 T 12-10-2018 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.815 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 8.4E-233 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 Pfam PF05746 DALR anticodon binding domain 582 679 7.2E-8 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 2.2E-202 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.2E-33 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 5.2E-33 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.2E-33 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 5.2E-33 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_30060 dd537bf19a155a698e260bf84f0a000d 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 5.2E-33 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 Gene3D G3DSA:3.40.30.10 1 103 1.8E-15 T 12-10-2018 ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 SUPERFAMILY SSF47616 134 207 3.62E-8 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 8.2E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 Pfam PF14497 Glutathione S-transferase, C-terminal domain 138 204 8.7E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 Gene3D G3DSA:1.20.1050.10 116 214 2.6E-7 T 12-10-2018 ABD1_14890 99406f0fe1612b931a2cd4cb56448f96 254 SUPERFAMILY SSF52833 2 99 3.52E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily ABD1_24830 ee4c5353cf69dd89d68a1e792fdb1f5b 402 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 21 396 4.0E-161 T 12-10-2018 IPR011673 Protein of unknown function DUF1615 ABD1_24830 ee4c5353cf69dd89d68a1e792fdb1f5b 402 Pfam PF07759 Protein of unknown function (DUF1615) 52 396 1.5E-118 T 12-10-2018 IPR011673 Protein of unknown function DUF1615 ABD1_28020 79230980183ba72b9998c8f6f92cbf1c 403 Pfam PF13679 Methyltransferase domain 160 295 2.2E-32 T 12-10-2018 IPR025714 Methyltransferase domain ABD1_28020 79230980183ba72b9998c8f6f92cbf1c 403 SUPERFAMILY SSF53335 181 311 6.66E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_28020 79230980183ba72b9998c8f6f92cbf1c 403 Gene3D G3DSA:3.40.50.150 153 277 2.6E-9 T 12-10-2018 ABD1_30610 c1cddbd708d2c4e96c8ebffb38157d55 127 SUPERFAMILY SSF55298 1 126 1.73E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_30610 c1cddbd708d2c4e96c8ebffb38157d55 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 7.5E-48 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 ABD1_30610 c1cddbd708d2c4e96c8ebffb38157d55 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.6E-37 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABD1_30610 c1cddbd708d2c4e96c8ebffb38157d55 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 ABD1_30610 c1cddbd708d2c4e96c8ebffb38157d55 127 Gene3D G3DSA:3.30.1330.40 3 126 1.9E-50 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABD1_26430 0168a9dec207f8abc3f4f1e0586fd51a 225 SUPERFAMILY SSF55486 138 223 1.88E-6 T 12-10-2018 ABD1_03160 d743e61e95cdc57218fb8da39608624d 122 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 107 2.4E-25 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABD1_03750 ccd109ad8597bfce307eef1709294e50 231 SUPERFAMILY SSF46785 2 61 9.29E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_03750 ccd109ad8597bfce307eef1709294e50 231 Pfam PF13280 WYL domain 136 226 2.2E-13 T 12-10-2018 IPR026881 WYL domain ABD1_03750 ccd109ad8597bfce307eef1709294e50 231 Pfam PF08279 HTH domain 6 60 7.2E-17 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 ABD1_03750 ccd109ad8597bfce307eef1709294e50 231 Gene3D G3DSA:1.10.10.10 1 63 3.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_15070 08c8f3e3eacc7a7dec9924588773af70 208 Pfam PF04116 Fatty acid hydroxylase superfamily 5 147 2.6E-7 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ABD1_17330 6251962fd87d2d3bbbe5e22d2ec24416 416 Pfam PF01738 Dienelactone hydrolase family 16 232 1.2E-47 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ABD1_17330 6251962fd87d2d3bbbe5e22d2ec24416 416 Gene3D G3DSA:3.40.50.1820 2 233 1.1E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_17330 6251962fd87d2d3bbbe5e22d2ec24416 416 SUPERFAMILY SSF54427 239 383 5.7E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily ABD1_17330 6251962fd87d2d3bbbe5e22d2ec24416 416 Gene3D G3DSA:3.10.450.50 240 378 2.7E-21 T 12-10-2018 ABD1_17330 6251962fd87d2d3bbbe5e22d2ec24416 416 SUPERFAMILY SSF53474 2 233 9.1E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_31860 a7d59bc30c2921c827f9e30a55548ece 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 108 8.0E-35 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC ABD1_31860 a7d59bc30c2921c827f9e30a55548ece 113 Pfam PF06942 GlpM protein 6 111 2.5E-45 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC ABD1_31290 3ce2f5c5f869f2216ed947b7bd68aff4 199 Pfam PF01810 LysE type translocator 11 196 4.0E-22 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_06570 039c39b60732c07dc8761f21f6904368 251 Pfam PF05275 Copper resistance protein B precursor (CopB) 43 251 1.2E-46 T 12-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 ABD1_28620 691320959d20127a5268722f4873ca11 283 Pfam PF02811 PHP domain 5 124 6.7E-12 T 12-10-2018 IPR004013 PHP domain GO:0003824 ABD1_28620 691320959d20127a5268722f4873ca11 283 Gene3D G3DSA:3.20.20.140 4 256 3.8E-68 T 12-10-2018 ABD1_28620 691320959d20127a5268722f4873ca11 283 SUPERFAMILY SSF89550 4 270 3.01E-43 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABD1_28620 691320959d20127a5268722f4873ca11 283 Gene3D G3DSA:1.10.150.650 102 175 3.8E-68 T 12-10-2018 ABD1_28620 691320959d20127a5268722f4873ca11 283 SMART SM00481 4 69 7.3E-16 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABD1_15310 e7eab865b423e456f356fcf8d5ce69f5 196 Pfam PF04264 YceI-like domain 26 188 3.9E-41 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABD1_15310 e7eab865b423e456f356fcf8d5ce69f5 196 Gene3D G3DSA:2.40.128.110 24 190 5.5E-50 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABD1_15310 e7eab865b423e456f356fcf8d5ce69f5 196 SMART SM00867 25 189 2.2E-66 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABD1_15310 e7eab865b423e456f356fcf8d5ce69f5 196 SUPERFAMILY SSF101874 23 189 3.14E-51 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABD1_18030 fc091de108c14916d42bb7bb6e7dd65b 75 SUPERFAMILY SSF48498 5 69 6.12E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_18030 fc091de108c14916d42bb7bb6e7dd65b 75 Gene3D G3DSA:1.10.357.10 1 72 3.2E-15 T 12-10-2018 ABD1_24080 e92ff120a1341c556b3e308e1d0d6e3e 698 Pfam PF02554 Carbon starvation protein CstA 38 414 1.3E-169 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ABD1_24080 e92ff120a1341c556b3e308e1d0d6e3e 698 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 4.0E-32 T 12-10-2018 IPR025299 CstA, C-terminal domain ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 Gene3D G3DSA:3.30.860.10 1 91 3.6E-39 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 SUPERFAMILY SSF54570 3 84 5.23E-34 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.7E-43 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 Pfam PF00203 Ribosomal protein S19 3 83 3.9E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 PIRSF PIRSF002144 1 91 3.9E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_29620 63fb7b18fb813bfae2b4fba41d688e3a 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABD1_23910 bd5c0775145d9e467c209d6baef1ad43 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 3.8E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_23910 bd5c0775145d9e467c209d6baef1ad43 187 Gene3D G3DSA:1.10.357.10 7 183 2.4E-19 T 12-10-2018 ABD1_23910 bd5c0775145d9e467c209d6baef1ad43 187 SUPERFAMILY SSF46689 13 69 2.41E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_23910 bd5c0775145d9e467c209d6baef1ad43 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_23910 bd5c0775145d9e467c209d6baef1ad43 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_08470 04d18b295d265a5e3d6d989333dab994 177 Gene3D G3DSA:3.30.300.20 17 171 2.7E-46 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_08470 04d18b295d265a5e3d6d989333dab994 177 Pfam PF02566 OsmC-like protein 73 164 2.6E-11 T 12-10-2018 IPR003718 OsmC/Ohr family ABD1_08470 04d18b295d265a5e3d6d989333dab994 177 SUPERFAMILY SSF82784 24 170 1.96E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily ABD1_02220 4e904235025eebc7976a6d2afb266450 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 3.8E-91 T 12-10-2018 IPR004450 Threonine synthase-like ABD1_02220 4e904235025eebc7976a6d2afb266450 379 Gene3D G3DSA:3.40.50.1100 65 161 1.2E-115 T 12-10-2018 ABD1_02220 4e904235025eebc7976a6d2afb266450 379 PIRSF PIRSF038945 1 375 5.9E-151 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 ABD1_02220 4e904235025eebc7976a6d2afb266450 379 Gene3D G3DSA:3.40.50.1100 17 350 1.2E-115 T 12-10-2018 ABD1_02220 4e904235025eebc7976a6d2afb266450 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABD1_02220 4e904235025eebc7976a6d2afb266450 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 1.1E-64 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABD1_02220 4e904235025eebc7976a6d2afb266450 379 SUPERFAMILY SSF53686 11 376 3.14E-101 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 1.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 Pfam PF00361 Proton-conducting membrane transporter 134 412 1.0E-83 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 621 9.8E-201 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.5E-21 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.6E-51 T 12-10-2018 ABD1_07140 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.6E-51 T 12-10-2018 ABD1_01980 9b485f5b89b91f817e773672831d5561 273 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 273 6.2E-35 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ABD1_01980 9b485f5b89b91f817e773672831d5561 273 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 31 273 7.6E-31 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ABD1_29860 db5187bdfd029709a4460c05b65845d2 213 Pfam PF05494 MlaC protein 36 190 1.0E-36 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ABD1_29860 db5187bdfd029709a4460c05b65845d2 213 Gene3D G3DSA:3.10.450.710 27 207 4.4E-46 T 12-10-2018 ABD1_29860 db5187bdfd029709a4460c05b65845d2 213 PIRSF PIRSF004649 1 213 2.8E-54 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ABD1_31700 b251f3977ffd38e9af8ead0caf13b083 275 Pfam PF13489 Methyltransferase domain 46 215 1.2E-9 T 12-10-2018 ABD1_31700 b251f3977ffd38e9af8ead0caf13b083 275 Gene3D G3DSA:3.40.50.150 33 275 1.0E-25 T 12-10-2018 ABD1_31700 b251f3977ffd38e9af8ead0caf13b083 275 SUPERFAMILY SSF53335 29 273 3.88E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.2E-21 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.0E-36 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.0E-36 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.0E-36 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.0E-36 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_03070 1fb12965cceb24b5f329f40d520a3168 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 6.9E-26 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:2.40.110.10 161 281 3.9E-94 T 12-10-2018 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 1.2E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.20.140.10 282 451 3.9E-94 T 12-10-2018 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF56645 38 279 2.36E-57 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.10.540.10 44 160 3.9E-94 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 9.4E-7 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF47203 288 474 7.73E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 583 3.0E-24 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 3.4E-17 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABD1_28300 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.1E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABD1_19310 c4172463c366b69c2e10b1767f90f843 137 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 48 131 27.569 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ABD1_19310 c4172463c366b69c2e10b1767f90f843 137 SUPERFAMILY SSF54736 51 135 6.28E-31 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABD1_19310 c4172463c366b69c2e10b1767f90f843 137 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 53 131 1.9E-32 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 ABD1_19310 c4172463c366b69c2e10b1767f90f843 137 Gene3D G3DSA:3.30.1390.10 31 137 4.0E-40 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABD1_03660 934d64c3fbc1a7409569cd664dde4233 132 Pfam PF04657 Putative inner membrane exporter, YdcZ 1 128 3.0E-42 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ ABD1_24960 025209f618c3181e8d008d5f142aa135 410 Pfam PF00155 Aminotransferase class I and II 32 385 1.5E-73 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABD1_24960 025209f618c3181e8d008d5f142aa135 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABD1_24960 025209f618c3181e8d008d5f142aa135 410 SUPERFAMILY SSF53383 4 392 9.11E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABD1_24960 025209f618c3181e8d008d5f142aa135 410 Gene3D G3DSA:3.90.1150.10 27 387 1.0E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABD1_24960 025209f618c3181e8d008d5f142aa135 410 Gene3D G3DSA:3.40.640.10 64 286 1.0E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABD1_23280 0d7c260fa4adcf3c3303153f80476a04 390 Gene3D G3DSA:1.20.1250.20 1 386 8.9E-49 T 12-10-2018 ABD1_23280 0d7c260fa4adcf3c3303153f80476a04 390 SUPERFAMILY SSF103473 2 382 5.1E-58 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_23280 0d7c260fa4adcf3c3303153f80476a04 390 Pfam PF07690 Major Facilitator Superfamily 8 308 2.5E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_19980 636760399432843518d57a8bae2c675e 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 ABD1_19980 636760399432843518d57a8bae2c675e 274 Pfam PF01148 Cytidylyltransferase family 3 265 1.1E-59 T 12-10-2018 ABD1_15240 2e0c6513e9e5420b3e6861c397e9dc79 186 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 1.3E-22 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 ABD1_01480 4ebf2924d84a5a0048f65f59c9d328d5 161 Gene3D G3DSA:1.10.10.10 12 101 5.5E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_01480 4ebf2924d84a5a0048f65f59c9d328d5 161 SUPERFAMILY SSF46785 23 155 7.72E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_01480 4ebf2924d84a5a0048f65f59c9d328d5 161 Gene3D G3DSA:3.30.1490.190 102 160 4.0E-13 T 12-10-2018 ABD1_01480 4ebf2924d84a5a0048f65f59c9d328d5 161 Pfam PF01475 Ferric uptake regulator family 32 148 4.3E-10 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABD1_08950 ddf4f3d505b4be2ede8effd1305da8a8 170 Pfam PF04973 Nicotinamide mononucleotide transporter 1 158 2.0E-39 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ABD1_08950 ddf4f3d505b4be2ede8effd1305da8a8 170 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 162 3.8E-23 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ABD1_12830 eb8dd13ef178829336268308ad9a3057 245 Pfam PF08856 Protein of unknown function (DUF1826) 39 165 1.5E-5 T 12-10-2018 IPR014955 Protein of unknown function DUF1826 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SUPERFAMILY SSF48371 12 325 4.16E-36 T 12-10-2018 IPR016024 Armadillo-type fold ABD1_17150 d611d7832e22428019577b6a84644abf 332 Gene3D G3DSA:1.25.10.10 8 194 2.5E-23 T 12-10-2018 IPR011989 Armadillo-like helical ABD1_17150 d611d7832e22428019577b6a84644abf 332 Gene3D G3DSA:1.25.10.110 267 331 4.0E-7 T 12-10-2018 ABD1_17150 d611d7832e22428019577b6a84644abf 332 Gene3D G3DSA:1.25.10.110 195 266 1.3E-9 T 12-10-2018 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 59 88 1.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 279 308 0.15 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 90 119 43.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 217 246 85.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 248 277 0.88 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 27 56 560.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 SMART SM00567 E-Z type HEAT repeats 152 181 0.0017 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABD1_17150 d611d7832e22428019577b6a84644abf 332 Pfam PF13646 HEAT repeats 112 194 5.2E-12 T 12-10-2018 ABD1_17150 d611d7832e22428019577b6a84644abf 332 Pfam PF13646 HEAT repeats 18 100 8.9E-13 T 12-10-2018 ABD1_17150 d611d7832e22428019577b6a84644abf 332 Pfam PF13646 HEAT repeats 237 320 8.1E-14 T 12-10-2018 ABD1_33120 8aa9136919a0422a7a2a7aad49f44042 411 Gene3D G3DSA:3.40.50.300 22 249 3.1E-73 T 12-10-2018 ABD1_33120 8aa9136919a0422a7a2a7aad49f44042 411 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 276 391 3.6E-30 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABD1_33120 8aa9136919a0422a7a2a7aad49f44042 411 SMART SM00833 276 391 2.6E-51 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABD1_33120 8aa9136919a0422a7a2a7aad49f44042 411 SUPERFAMILY SSF52540 15 338 2.44E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_33120 8aa9136919a0422a7a2a7aad49f44042 411 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 25 229 8.6E-60 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABD1_28320 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Gene3D G3DSA:3.10.450.160 59 126 2.4E-16 T 12-10-2018 ABD1_28320 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Pfam PF11776 Nickel/cobalt transporter regulator 76 120 8.4E-19 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_28320 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 72 117 8.0E-12 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 Pfam PF07690 Major Facilitator Superfamily 8 221 6.5E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 217 234 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 274 295 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 14 30 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 299 319 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 159 179 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 334 357 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 364 383 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 43 62 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 74 98 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 101 122 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 246 266 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 PRINTS PR01035 Tetracycline resistance protein signature 131 153 5.8E-88 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 Gene3D G3DSA:1.20.1250.20 1 384 1.1E-66 T 12-10-2018 ABD1_30040 4c13818e14880b5d3fd4c3018c42a1a0 394 SUPERFAMILY SSF103473 2 385 5.49E-63 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_06580 6ce03b8e185816b00c82d45ba93693ed 313 Pfam PF01545 Cation efflux family 141 308 1.2E-11 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_06580 6ce03b8e185816b00c82d45ba93693ed 313 SUPERFAMILY SSF55008 45 107 1.57E-6 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABD1_06580 6ce03b8e185816b00c82d45ba93693ed 313 Gene3D G3DSA:1.20.1510.10 133 311 1.2E-7 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_06580 6ce03b8e185816b00c82d45ba93693ed 313 SUPERFAMILY SSF161111 134 308 3.14E-29 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_12770 347164448c9d8122fc885d31fa307fc8 395 Pfam PF00563 EAL domain 144 377 4.1E-68 T 12-10-2018 IPR001633 EAL domain ABD1_12770 347164448c9d8122fc885d31fa307fc8 395 Gene3D G3DSA:3.20.20.450 139 393 1.1E-88 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_12770 347164448c9d8122fc885d31fa307fc8 395 SUPERFAMILY SSF141868 142 387 1.57E-81 T 12-10-2018 IPR035919 EAL domain superfamily ABD1_12770 347164448c9d8122fc885d31fa307fc8 395 SMART SM00052 137 383 3.3E-96 T 12-10-2018 IPR001633 EAL domain ABD1_12700 c744edcbe255a181b172ea5c6b99b645 222 Gene3D G3DSA:3.40.50.150 1 222 5.7E-64 T 12-10-2018 ABD1_12700 c744edcbe255a181b172ea5c6b99b645 222 Pfam PF01596 O-methyltransferase 29 185 5.4E-39 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ABD1_12700 c744edcbe255a181b172ea5c6b99b645 222 SUPERFAMILY SSF53335 4 221 1.6E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_15300 e8e989d9f78516c65cc890568e9541ad 135 Pfam PF02566 OsmC-like protein 36 132 1.2E-21 T 12-10-2018 IPR003718 OsmC/Ohr family ABD1_15300 e8e989d9f78516c65cc890568e9541ad 135 SUPERFAMILY SSF82784 4 134 9.55E-36 T 12-10-2018 IPR036102 OsmC/Ohr superfamily ABD1_15300 e8e989d9f78516c65cc890568e9541ad 135 Gene3D G3DSA:3.30.300.20 1 135 5.8E-37 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_02500 4c4b6c797db79801fa8da57b0a033552 108 SUPERFAMILY SSF81273 66 108 4.71E-12 T 12-10-2018 ABD1_02500 4c4b6c797db79801fa8da57b0a033552 108 SMART SM00528 63 108 1.0E-15 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ABD1_02500 4c4b6c797db79801fa8da57b0a033552 108 Gene3D G3DSA:4.10.430.10 58 108 9.2E-19 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 ABD1_02500 4c4b6c797db79801fa8da57b0a033552 108 Pfam PF00816 H-NS histone family 12 101 4.0E-22 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ABD1_33990 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_33990 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_33990 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_33990 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABD1_33990 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABD1_15320 b551e3b3ad431db95697872c67885466 215 Pfam PF04970 Lecithin retinol acyltransferase 9 107 1.9E-15 T 12-10-2018 IPR007053 LRAT-like domain ABD1_28880 c7d776464fb253dceabaa01bd170b517 324 SUPERFAMILY SSF53659 5 322 3.73E-100 T 12-10-2018 ABD1_28880 c7d776464fb253dceabaa01bd170b517 324 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 321 1.1E-118 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABD1_28880 c7d776464fb253dceabaa01bd170b517 324 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 9.6E-102 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABD1_28880 c7d776464fb253dceabaa01bd170b517 324 Gene3D G3DSA:3.40.718.10 3 324 1.7E-115 T 12-10-2018 ABD1_28880 c7d776464fb253dceabaa01bd170b517 324 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 324 32.902 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 ABD1_14300 32a3919427ae78e43bcd38fefcabe6ee 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 4 61 1.5E-24 T 12-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal ABD1_14300 32a3919427ae78e43bcd38fefcabe6ee 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 2.1E-126 T 12-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 ABD1_05090 408b539d66d6995f5d47ab2588f64915 169 Gene3D G3DSA:3.30.160.150 28 169 1.0E-41 T 12-10-2018 ABD1_05090 408b539d66d6995f5d47ab2588f64915 169 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 21.455 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ABD1_22270 b918a30e8bd31fe0bf72e8a8efc86d81 214 Gene3D G3DSA:3.90.550.10 1 199 7.7E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_22270 b918a30e8bd31fe0bf72e8a8efc86d81 214 SUPERFAMILY SSF53448 1 202 2.16E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_22270 b918a30e8bd31fe0bf72e8a8efc86d81 214 Pfam PF00535 Glycosyl transferase family 2 5 106 3.3E-14 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABD1_26010 5238dab1c6dec220bab9a5440ec73e3d 226 Gene3D G3DSA:1.10.357.10 33 212 4.0E-19 T 12-10-2018 ABD1_26010 5238dab1c6dec220bab9a5440ec73e3d 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 60 2.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_26010 5238dab1c6dec220bab9a5440ec73e3d 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 68 91 2.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_26010 5238dab1c6dec220bab9a5440ec73e3d 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 91 3.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_26010 5238dab1c6dec220bab9a5440ec73e3d 226 SUPERFAMILY SSF46689 47 103 1.95E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_30390 59d8890037feaf2f0ee7e49ef5ad235e 294 Pfam PF00892 EamA-like transporter family 146 276 5.0E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_30390 59d8890037feaf2f0ee7e49ef5ad235e 294 SUPERFAMILY SSF103481 181 279 1.7E-9 T 12-10-2018 ABD1_21770 93df1b050eb992d6624e8e938c949643 198 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 7 151 3.1E-8 T 12-10-2018 IPR007296 Domain of unknown function DUF403 ABD1_26930 0fa6b16d47118dab32e913fd1ab9bc05 301 Pfam PF03547 Membrane transport protein 153 296 8.1E-12 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABD1_26930 0fa6b16d47118dab32e913fd1ab9bc05 301 Gene3D G3DSA:1.20.1530.20 156 301 1.3E-7 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_18980 a80a5e0b8073e5dc12bb984864cafe9b 137 Pfam PF04143 Sulphur transport 33 130 5.1E-9 T 12-10-2018 IPR007272 Sulphur transport domain ABD1_10770 c9f4b2fafacafdd2af59f3043ec1841e 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 7.4E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_10770 c9f4b2fafacafdd2af59f3043ec1841e 336 SUPERFAMILY SSF161098 132 319 9.81E-21 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_10770 c9f4b2fafacafdd2af59f3043ec1841e 336 Gene3D G3DSA:1.10.3720.10 125 331 8.0E-17 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_05900 0ef59c68ebc84f7af133b6a903576747 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 2.2E-40 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_05900 0ef59c68ebc84f7af133b6a903576747 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 2.9E-35 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_05900 0ef59c68ebc84f7af133b6a903576747 160 SUPERFAMILY SSF55083 4 147 6.93E-47 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_05900 0ef59c68ebc84f7af133b6a903576747 160 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_05900 0ef59c68ebc84f7af133b6a903576747 160 Gene3D G3DSA:3.30.70.560 2 153 1.2E-49 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABD1_29220 21bb4eaf0a0bc7e97b36683e5845c103 304 SUPERFAMILY SSF103481 200 299 4.84E-12 T 12-10-2018 ABD1_29220 21bb4eaf0a0bc7e97b36683e5845c103 304 SUPERFAMILY SSF103481 45 145 4.58E-11 T 12-10-2018 ABD1_29220 21bb4eaf0a0bc7e97b36683e5845c103 304 Pfam PF00892 EamA-like transporter family 13 143 8.5E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_29220 21bb4eaf0a0bc7e97b36683e5845c103 304 Pfam PF00892 EamA-like transporter family 160 295 5.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_28360 049ec310db681adeda99fe380e0a59d5 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 212 9.8E-43 T 12-10-2018 IPR025238 Protein of unknown function DUF4184 ABD1_19900 2dfb48de14adb0f019497e07555046f3 294 SUPERFAMILY SSF48452 176 290 1.52E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_19900 2dfb48de14adb0f019497e07555046f3 294 Pfam PF16331 TolA binding protein trimerisation 50 103 1.1E-10 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 ABD1_19900 2dfb48de14adb0f019497e07555046f3 294 Gene3D G3DSA:1.25.40.10 175 293 6.4E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_19900 2dfb48de14adb0f019497e07555046f3 294 Pfam PF13174 Tetratricopeptide repeat 181 209 0.023 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_19900 2dfb48de14adb0f019497e07555046f3 294 Pfam PF13174 Tetratricopeptide repeat 215 248 0.039 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABD1_32720 b2f4ef5974b5322389ef5a42df67df6b 436 Pfam PF04286 Protein of unknown function (DUF445) 55 429 4.3E-72 T 12-10-2018 IPR007383 Protein of unknown function DUF445 ABD1_20620 e6d64af91f0e676d6c63a8df811f5810 188 Pfam PF01810 LysE type translocator 6 186 1.8E-34 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_20620 e6d64af91f0e676d6c63a8df811f5810 188 PIRSF PIRSF006324 1 188 1.0E-40 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_28010 db32bdc282fdac3fe5b5be7c0a91bc4c 139 SUPERFAMILY SSF55729 2 138 3.21E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_28010 db32bdc282fdac3fe5b5be7c0a91bc4c 139 Pfam PF13673 Acetyltransferase (GNAT) domain 22 137 3.3E-21 T 12-10-2018 IPR000182 GNAT domain ABD1_28010 db32bdc282fdac3fe5b5be7c0a91bc4c 139 Gene3D G3DSA:3.40.630.30 10 138 8.7E-38 T 12-10-2018 ABD1_00250 08ee58d65cf4635a6f9e4003495aaf3e 265 Gene3D G3DSA:1.10.3720.10 56 258 5.9E-28 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_00250 08ee58d65cf4635a6f9e4003495aaf3e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 254 7.6E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_00250 08ee58d65cf4635a6f9e4003495aaf3e 265 SUPERFAMILY SSF161098 63 245 5.63E-35 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_28080 fa6f4b55f21115ad15e196a4d96329b8 234 SUPERFAMILY SSF56281 20 176 2.88E-20 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_28080 fa6f4b55f21115ad15e196a4d96329b8 234 Pfam PF00753 Metallo-beta-lactamase superfamily 48 158 9.8E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_28080 fa6f4b55f21115ad15e196a4d96329b8 234 Gene3D G3DSA:3.60.15.10 18 194 3.5E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_24030 d78557ced7fe1805cf92e1d47787aadb 339 Pfam PF00487 Fatty acid desaturase 54 305 3.3E-35 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_07710 cf43e9a820c266f3cf6b37e9d858684c 186 Pfam PF02620 Uncharacterized ACR, COG1399 64 181 3.5E-18 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD ABD1_28690 e9a8531853c10324b87decaf94c8b05d 164 Pfam PF14539 Domain of unknown function (DUF4442) 24 156 2.1E-33 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 ABD1_28690 e9a8531853c10324b87decaf94c8b05d 164 Gene3D G3DSA:3.10.129.10 10 159 7.1E-36 T 12-10-2018 ABD1_28690 e9a8531853c10324b87decaf94c8b05d 164 SUPERFAMILY SSF54637 25 163 2.27E-21 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_31550 21326c0ed56688fa8db10bc6035a59cb 247 SUPERFAMILY SSF48452 27 110 6.13E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_25540 bd23330c7aa9f130ce2c71681114d997 814 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 28 52 3.7E-10 T 12-10-2018 IPR026457 CSLREA domain ABD1_25540 bd23330c7aa9f130ce2c71681114d997 814 SUPERFAMILY SSF51126 20 332 8.08E-16 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor ABD1_28440 87a5abc7ff8571f5c2e3463bb77ea66f 255 Pfam PF00535 Glycosyl transferase family 2 7 153 2.2E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABD1_28440 87a5abc7ff8571f5c2e3463bb77ea66f 255 Gene3D G3DSA:3.90.550.10 6 229 3.7E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_28440 87a5abc7ff8571f5c2e3463bb77ea66f 255 SUPERFAMILY SSF53448 2 118 1.72E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_30000 b453963cc61dfd905ae1394f2b6ba8a9 84 Pfam PF04024 PspC domain 6 63 8.9E-21 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ABD1_16360 0bc35a8b6ef5814bbb60a716261192d4 636 Gene3D G3DSA:1.10.510.40 414 625 7.7E-8 T 12-10-2018 ABD1_16360 0bc35a8b6ef5814bbb60a716261192d4 636 Pfam PF04183 IucA / IucC family 171 421 5.8E-46 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ABD1_16360 0bc35a8b6ef5814bbb60a716261192d4 636 Pfam PF06276 Ferric iron reductase FhuF-like transporter 465 611 1.2E-14 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain ABD1_17120 53a27516e3b1b133ab6a78396153d0ef 476 SUPERFAMILY SSF160387 383 472 7.32E-10 T 12-10-2018 ABD1_17120 53a27516e3b1b133ab6a78396153d0ef 476 Gene3D G3DSA:3.40.190.10 132 232 2.3E-41 T 12-10-2018 ABD1_17120 53a27516e3b1b133ab6a78396153d0ef 476 Pfam PF13379 NMT1-like family 70 276 2.3E-12 T 12-10-2018 ABD1_17120 53a27516e3b1b133ab6a78396153d0ef 476 Gene3D G3DSA:3.40.190.10 73 291 2.3E-41 T 12-10-2018 ABD1_17120 53a27516e3b1b133ab6a78396153d0ef 476 SUPERFAMILY SSF53850 57 336 4.53E-39 T 12-10-2018 ABD1_23200 e658d54206c22cb6561d210f9f84730d 195 Pfam PF03591 AzlC protein 2 122 1.9E-27 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease ABD1_11060 ed7a611605f3ca3aeacc305cd2e887d3 468 Gene3D G3DSA:1.20.1740.10 7 466 1.5E-63 T 12-10-2018 ABD1_11060 ed7a611605f3ca3aeacc305cd2e887d3 468 PIRSF PIRSF006060 1 466 6.6E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABD1_11060 ed7a611605f3ca3aeacc305cd2e887d3 468 Pfam PF00324 Amino acid permease 17 454 2.2E-103 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.4E-12 T 12-10-2018 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 SUPERFAMILY SSF46785 5 60 2.34E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 SMART SM00344 5 107 3.2E-17 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.5E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.5E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.5E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 Gene3D G3DSA:3.30.70.920 56 137 1.4E-7 T 12-10-2018 ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 Gene3D G3DSA:1.10.10.10 2 55 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_32020 1a4e0033c72fef0eda663e2e7c421cc0 137 SUPERFAMILY SSF54909 65 131 2.01E-5 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_08290 c97c6f255a6d482e41538d716d0360ec 308 SUPERFAMILY SSF69593 88 306 2.62E-29 T 12-10-2018 ABD1_08290 c97c6f255a6d482e41538d716d0360ec 308 Pfam PF01553 Acyltransferase 91 235 4.7E-10 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_08290 c97c6f255a6d482e41538d716d0360ec 308 SMART SM00563 94 236 4.0E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABD1_02380 b0988b7f7c6b1ed5dc9013b2f2316a4a 301 SUPERFAMILY SSF103481 64 148 1.07E-5 T 12-10-2018 ABD1_02380 b0988b7f7c6b1ed5dc9013b2f2316a4a 301 SUPERFAMILY SSF103481 202 299 6.15E-12 T 12-10-2018 ABD1_02380 b0988b7f7c6b1ed5dc9013b2f2316a4a 301 Pfam PF00892 EamA-like transporter family 12 144 6.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_02380 b0988b7f7c6b1ed5dc9013b2f2316a4a 301 Pfam PF00892 EamA-like transporter family 162 296 7.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_01310 e94c15c652e153bc995e2b5926f3a011 213 Pfam PF09335 SNARE associated Golgi protein 45 171 5.5E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein ABD1_03130 6ea99ec11b9a3fdff14d0c89e3d128a5 66 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 9 59 1.0E-17 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ABD1_12490 8c461aa080745a54d3dc3c7e5c9bb874 148 SUPERFAMILY SSF46785 8 144 3.67E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABD1_12490 8c461aa080745a54d3dc3c7e5c9bb874 148 Gene3D G3DSA:1.10.10.10 4 148 6.4E-41 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABD1_12490 8c461aa080745a54d3dc3c7e5c9bb874 148 Pfam PF01638 HxlR-like helix-turn-helix 20 105 9.9E-21 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type ABD1_27110 74dde79f7d7ac43392a2fbdc4e80e959 291 Gene3D G3DSA:3.40.50.880 4 291 4.9E-77 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_27110 74dde79f7d7ac43392a2fbdc4e80e959 291 SUPERFAMILY SSF52317 8 288 8.97E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like ABD1_27110 74dde79f7d7ac43392a2fbdc4e80e959 291 Pfam PF01965 DJ-1/PfpI family 77 198 7.9E-9 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABD1_27110 74dde79f7d7ac43392a2fbdc4e80e959 291 PIRSF PIRSF037798 1 291 1.5E-161 T 12-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 ABD1_27260 147196f2addadb426f7bbed3fa1e411c 119 Pfam PF04093 rod shape-determining protein MreD 2 111 1.6E-8 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ABD1_27260 147196f2addadb426f7bbed3fa1e411c 119 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 1 114 6.6E-18 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ABD1_15450 c1cc203bbbdd42088e68a82bef1052ad 226 Pfam PF06912 Protein of unknown function (DUF1275) 14 208 2.4E-31 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 ABD1_10070 36720d9ccaeb0b2d8c6ae7b09538e782 316 Pfam PF07120 Protein of unknown function (DUF1376) 2 88 7.5E-28 T 12-10-2018 IPR010781 Protein of unknown function DUF1376 ABD1_17080 378aceb433d0039bad43114cfaf6f23d 449 PIRSF PIRSF004810 1 449 3.3E-131 T 12-10-2018 IPR014047 Chromate transporter, long chain ABD1_17080 378aceb433d0039bad43114cfaf6f23d 449 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 443 5.0E-74 T 12-10-2018 IPR014047 Chromate transporter, long chain ABD1_17080 378aceb433d0039bad43114cfaf6f23d 449 Pfam PF02417 Chromate transporter 259 443 8.6E-33 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ABD1_17080 378aceb433d0039bad43114cfaf6f23d 449 Pfam PF02417 Chromate transporter 19 183 3.2E-37 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ABD1_29060 cf2c91c8de722719d4f151d8424c181b 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.693 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ABD1_29060 cf2c91c8de722719d4f151d8424c181b 285 SUPERFAMILY SSF53335 8 276 1.39E-83 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_29060 cf2c91c8de722719d4f151d8424c181b 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 8.7E-72 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ABD1_29060 cf2c91c8de722719d4f151d8424c181b 285 Gene3D G3DSA:3.40.50.150 1 285 1.8E-100 T 12-10-2018 ABD1_08420 2e98ce26a9dfaa82b42b82c207842252 372 Gene3D G3DSA:3.40.50.300 102 355 1.9E-84 T 12-10-2018 ABD1_08420 2e98ce26a9dfaa82b42b82c207842252 372 Pfam PF00437 Type II/IV secretion system protein 29 269 6.2E-35 T 12-10-2018 IPR001482 Type II/IV secretion system protein ABD1_08420 2e98ce26a9dfaa82b42b82c207842252 372 SUPERFAMILY SSF52540 4 338 4.42E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_08420 2e98ce26a9dfaa82b42b82c207842252 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 3.2E-128 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 ABD1_08420 2e98ce26a9dfaa82b42b82c207842252 372 Gene3D G3DSA:3.30.450.90 1 100 2.8E-25 T 12-10-2018 ABD1_11380 967c9f7167a4e4b584857ba0a49400f3 135 Gene3D G3DSA:3.30.40.60 1 106 1.2E-11 T 12-10-2018 ABD1_11380 967c9f7167a4e4b584857ba0a49400f3 135 SMART SM00507 6 75 4.1E-4 T 12-10-2018 IPR003615 HNH nuclease ABD1_02150 7306547694818703ba914b5188843bd2 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 354 3.3E-66 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ABD1_02150 7306547694818703ba914b5188843bd2 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 354 1.5E-105 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 ABD1_28790 552949231975989b758e6d9c6d108199 242 Gene3D G3DSA:3.60.21.10 20 219 1.2E-20 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like ABD1_28790 552949231975989b758e6d9c6d108199 242 SUPERFAMILY SSF56300 22 241 7.74E-32 T 12-10-2018 ABD1_28790 552949231975989b758e6d9c6d108199 242 Pfam PF00149 Calcineurin-like phosphoesterase 22 213 4.3E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABD1_21100 2e4b27134d902326a9044dd55ee67d5f 217 Pfam PF00881 Nitroreductase family 8 193 1.0E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABD1_21100 2e4b27134d902326a9044dd55ee67d5f 217 Gene3D G3DSA:3.40.109.10 1 216 1.6E-58 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_21100 2e4b27134d902326a9044dd55ee67d5f 217 SUPERFAMILY SSF55469 1 215 2.88E-63 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABD1_31810 5e1372d9e57b1ee63b109d9fe81ed3a0 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 5.5E-12 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD ABD1_07590 33dfa4835d16b27d0c3632c83a577ee9 476 SUPERFAMILY SSF53756 3 454 5.53E-122 T 12-10-2018 ABD1_07590 33dfa4835d16b27d0c3632c83a577ee9 476 Gene3D G3DSA:3.40.50.2000 231 438 2.2E-144 T 12-10-2018 ABD1_07590 33dfa4835d16b27d0c3632c83a577ee9 476 Pfam PF00982 Glycosyltransferase family 20 17 453 4.2E-117 T 12-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 ABD1_07590 33dfa4835d16b27d0c3632c83a577ee9 476 Gene3D G3DSA:3.40.50.2000 21 450 2.2E-144 T 12-10-2018 ABD1_02490 b0df67b2b0bd36c3d4f99473d9e3735d 146 Pfam PF13279 Thioesterase-like superfamily 15 131 1.2E-18 T 12-10-2018 ABD1_02490 b0df67b2b0bd36c3d4f99473d9e3735d 146 SUPERFAMILY SSF54637 7 134 3.96E-33 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_02490 b0df67b2b0bd36c3d4f99473d9e3735d 146 Gene3D G3DSA:3.10.129.10 1 138 1.1E-39 T 12-10-2018 ABD1_20250 fd87139f037da76605e37be1903d1638 84 Gene3D G3DSA:3.10.20.30 1 84 3.0E-7 T 12-10-2018 IPR012675 Beta-grasp domain superfamily ABD1_20250 fd87139f037da76605e37be1903d1638 84 Pfam PF02597 ThiS family 22 84 3.3E-6 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABD1_20250 fd87139f037da76605e37be1903d1638 84 SUPERFAMILY SSF54285 7 84 1.59E-8 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABD1_13260 d0739ff9c8a8cdb39591db9c0182e947 392 Gene3D G3DSA:1.20.1250.20 205 389 7.8E-20 T 12-10-2018 ABD1_13260 d0739ff9c8a8cdb39591db9c0182e947 392 Gene3D G3DSA:1.20.1250.20 10 204 4.9E-13 T 12-10-2018 ABD1_13260 d0739ff9c8a8cdb39591db9c0182e947 392 Pfam PF07690 Major Facilitator Superfamily 28 347 2.9E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_13260 d0739ff9c8a8cdb39591db9c0182e947 392 SUPERFAMILY SSF103473 10 388 2.62E-47 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_21610 f512d9a7764c16818398e38fb8f5c90d 800 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 7 800 9.7E-136 T 12-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 ABD1_21610 f512d9a7764c16818398e38fb8f5c90d 800 SUPERFAMILY SSF48452 306 448 8.68E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_21610 f512d9a7764c16818398e38fb8f5c90d 800 Gene3D G3DSA:1.25.40.10 232 499 1.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_21610 f512d9a7764c16818398e38fb8f5c90d 800 SUPERFAMILY SSF48452 9 200 5.26E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_32170 9636ac4a220af27a6aac079838e6d2ae 121 Pfam PF03692 Putative zinc- or iron-chelating domain 10 89 9.0E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein ABD1_32450 f36d48b41d1e0e2b7d5b064e24a0545c 183 SUPERFAMILY SSF48403 8 141 3.07E-10 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_32450 f36d48b41d1e0e2b7d5b064e24a0545c 183 Gene3D G3DSA:1.25.40.20 2 182 6.5E-16 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_05190 b0354f5fe1368cb971c40d391a0443cb 290 Gene3D G3DSA:3.30.565.40 52 163 1.6E-8 T 12-10-2018 ABD1_01740 8e5c07c5e1ecc8c3ebf30f950de6dacd 105 Gene3D G3DSA:3.40.630.30 9 105 9.5E-24 T 12-10-2018 ABD1_01740 8e5c07c5e1ecc8c3ebf30f950de6dacd 105 SUPERFAMILY SSF55729 10 105 4.4E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_30350 5feeae9292138b266ad60ffa00d08498 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 1.5E-21 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABD1_30350 5feeae9292138b266ad60ffa00d08498 104 SUPERFAMILY SSF54909 1 99 2.19E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_30350 5feeae9292138b266ad60ffa00d08498 104 Gene3D G3DSA:3.30.70.100 1 104 1.2E-30 T 12-10-2018 ABD1_16070 01b634651f0468fe76cd53995b4d80fc 168 Gene3D G3DSA:3.50.30.40 4 168 7.0E-63 T 12-10-2018 ABD1_16070 01b634651f0468fe76cd53995b4d80fc 168 SUPERFAMILY SSF89562 26 167 7.33E-46 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABD1_16070 01b634651f0468fe76cd53995b4d80fc 168 Pfam PF03737 Aldolase/RraA 8 162 2.9E-46 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABD1_16070 01b634651f0468fe76cd53995b4d80fc 168 TIGRFAM TIGR01935 NOT-MenG: RraA family 9 162 1.3E-61 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 ABD1_30080 08fa5747794906d4459c0ce0490ac3fa 94 Pfam PF03795 YCII-related domain 1 74 6.2E-11 T 12-10-2018 IPR005545 YCII-related ABD1_30080 08fa5747794906d4459c0ce0490ac3fa 94 SUPERFAMILY SSF54909 3 81 2.63E-13 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_32950 4090af55db28789cc93ee0b9f960b1da 103 Pfam PF04608 Phosphatidylglycerophosphatase A 2 99 8.5E-37 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ABD1_32950 4090af55db28789cc93ee0b9f960b1da 103 SUPERFAMILY SSF101307 3 100 2.09E-33 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 ABD1_08630 cf406ba59606827f29ec521cd59bcecc 305 Pfam PF14267 Domain of unknown function (DUF4357) 242 288 2.0E-16 T 12-10-2018 IPR025579 Domain of unknown function DUF4357 ABD1_26920 f302be0ea5ff3194265c4d18ed4e0124 338 SUPERFAMILY SSF46565 188 227 3.53E-5 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_26920 f302be0ea5ff3194265c4d18ed4e0124 338 Gene3D G3DSA:1.10.287.110 185 236 2.2E-5 T 12-10-2018 IPR036869 Chaperone J-domain superfamily ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 SUPERFAMILY SSF53474 9 288 5.79E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 PRINTS PR00412 Epoxide hydrolase signature 230 246 6.1E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 PRINTS PR00412 Epoxide hydrolase signature 33 51 6.1E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 PRINTS PR00412 Epoxide hydrolase signature 99 112 6.1E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 PRINTS PR00412 Epoxide hydrolase signature 263 285 6.1E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 Gene3D G3DSA:3.40.50.1820 5 290 1.5E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_02690 70fc7ce9dc39e7be7d2686261d6a4472 290 Pfam PF00561 alpha/beta hydrolase fold 28 137 4.7E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_16500 a627b5775d31910f7d1e11436907ea23 369 Pfam PF00793 DAHP synthetase I family 59 354 3.4E-95 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABD1_16500 a627b5775d31910f7d1e11436907ea23 369 SUPERFAMILY SSF51569 22 363 2.93E-133 T 12-10-2018 ABD1_16500 a627b5775d31910f7d1e11436907ea23 369 PIRSF PIRSF001361 8 369 6.0E-159 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABD1_16500 a627b5775d31910f7d1e11436907ea23 369 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 21 364 8.6E-153 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABD1_16500 a627b5775d31910f7d1e11436907ea23 369 Gene3D G3DSA:3.20.20.70 17 365 2.1E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABD1_19020 a307522c9ccd31708b83d26e5a047128 439 Gene3D G3DSA:2.40.160.180 26 439 6.9E-121 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily ABD1_19020 a307522c9ccd31708b83d26e5a047128 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 71 439 1.2E-92 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 PRINTS PR01438 Universal stress protein signature 123 145 2.6E-22 T 12-10-2018 IPR006015 Universal stress protein A ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 PRINTS PR01438 Universal stress protein signature 3 21 2.6E-22 T 12-10-2018 IPR006015 Universal stress protein A ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 PRINTS PR01438 Universal stress protein signature 105 117 2.6E-22 T 12-10-2018 IPR006015 Universal stress protein A ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 Pfam PF00582 Universal stress protein family 3 145 1.6E-30 T 12-10-2018 IPR006016 UspA ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 SUPERFAMILY SSF52402 3 145 1.0E-38 T 12-10-2018 ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 Gene3D G3DSA:3.40.50.620 1 145 1.0E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_26410 a1b62aa1d6fe642bcf3f07fd41eb0871 145 PIRSF PIRSF006276 1 145 1.1E-19 T 12-10-2018 IPR006015 Universal stress protein A ABD1_27060 42e9681a7cea011832af10d84cb81271 122 SUPERFAMILY SSF142906 10 119 7.85E-36 T 12-10-2018 IPR038056 YjbR-like superfamily ABD1_27060 42e9681a7cea011832af10d84cb81271 122 Pfam PF04237 YjbR 17 106 3.6E-22 T 12-10-2018 IPR007351 Uncharacterised protein YjbR ABD1_27060 42e9681a7cea011832af10d84cb81271 122 Gene3D G3DSA:3.90.1150.30 2 122 5.6E-38 T 12-10-2018 IPR038056 YjbR-like superfamily ABD1_29050 b6c98292501d5fa1c8f42398568733de 280 Gene3D G3DSA:1.20.120.1760 35 188 1.3E-12 T 12-10-2018 ABD1_29050 b6c98292501d5fa1c8f42398568733de 280 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 52 216 6.3E-39 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ABD1_29050 b6c98292501d5fa1c8f42398568733de 280 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 86 108 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABD1_29050 b6c98292501d5fa1c8f42398568733de 280 Pfam PF01066 CDP-alcohol phosphatidyltransferase 45 108 4.7E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABD1_14270 c5cf0ac6b688fc5d177cc056efb9770a 200 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 198 5.7E-49 T 12-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 ABD1_14270 c5cf0ac6b688fc5d177cc056efb9770a 200 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 197 2.4E-47 T 12-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 ABD1_33870 24e716b3c9128cd748246eaef429c840 351 Pfam PF00355 Rieske [2Fe-2S] domain 29 113 6.2E-21 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_33870 24e716b3c9128cd748246eaef429c840 351 SUPERFAMILY SSF50022 18 136 4.06E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_33870 24e716b3c9128cd748246eaef429c840 351 SUPERFAMILY SSF55961 146 345 6.59E-27 T 12-10-2018 ABD1_33870 24e716b3c9128cd748246eaef429c840 351 Gene3D G3DSA:2.102.10.10 26 158 2.8E-35 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_33870 24e716b3c9128cd748246eaef429c840 351 Gene3D G3DSA:3.30.530.90 175 348 9.3E-8 T 12-10-2018 ABD1_29890 10d04d8d130390863723d56acd49ea46 276 Pfam PF00005 ABC transporter 32 181 2.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABD1_29890 10d04d8d130390863723d56acd49ea46 276 Gene3D G3DSA:3.40.50.300 14 268 6.2E-68 T 12-10-2018 ABD1_29890 10d04d8d130390863723d56acd49ea46 276 SMART SM00382 41 238 6.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain ABD1_29890 10d04d8d130390863723d56acd49ea46 276 SUPERFAMILY SSF52540 16 242 2.03E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABD1_16260 36596aa8d2b0e7bd587a1c3a82b83b74 407 Pfam PF00487 Fatty acid desaturase 131 339 1.9E-27 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_01820 a32769a0a376c4dc1c5e9727aba51099 166 Pfam PF10881 Protein of unknown function (DUF2726) 34 140 2.7E-11 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 ABD1_05780 b6f6f925cd2a9f011ab7749629a8b867 264 SUPERFAMILY SSF51658 1 258 5.8E-69 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily ABD1_05780 b6f6f925cd2a9f011ab7749629a8b867 264 Gene3D G3DSA:3.20.20.150 1 262 5.4E-67 T 12-10-2018 ABD1_05780 b6f6f925cd2a9f011ab7749629a8b867 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 5.5E-27 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABD1_05780 b6f6f925cd2a9f011ab7749629a8b867 264 PIRSF PIRSF006241 1 261 1.1E-93 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like ABD1_25010 0b23edf651f02277e2ae47fcb4497896 214 SUPERFAMILY SSF47240 10 213 1.33E-71 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_25010 0b23edf651f02277e2ae47fcb4497896 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 2.3E-16 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 ABD1_25010 0b23edf651f02277e2ae47fcb4497896 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 62 210 4.1E-48 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 ABD1_25010 0b23edf651f02277e2ae47fcb4497896 214 Gene3D G3DSA:1.20.1260.10 6 214 2.3E-73 T 12-10-2018 IPR012347 Ferritin-like ABD1_25010 0b23edf651f02277e2ae47fcb4497896 214 PIRSF PIRSF020736 1 214 3.3E-87 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 ABD1_31840 eb8a52571a2160cd83c382a09a207f27 327 Pfam PF04332 Protein of unknown function (DUF475) 20 322 7.4E-115 T 12-10-2018 IPR007427 Protein of unknown function DUF475 ABD1_15220 cf0075f2a3395c59f93b8f59512e8f07 181 Gene3D G3DSA:3.40.630.30 2 181 7.3E-54 T 12-10-2018 ABD1_15220 cf0075f2a3395c59f93b8f59512e8f07 181 Pfam PF13420 Acetyltransferase (GNAT) domain 21 165 6.8E-20 T 12-10-2018 ABD1_15220 cf0075f2a3395c59f93b8f59512e8f07 181 SUPERFAMILY SSF55729 17 173 2.33E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABD1_15980 3696e4c12ea09e9d128cfd0d6055dc60 312 SUPERFAMILY SSF161098 90 296 3.79E-15 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_15980 3696e4c12ea09e9d128cfd0d6055dc60 312 Gene3D G3DSA:1.10.3720.10 84 306 3.2E-20 T 12-10-2018 IPR035906 MetI-like superfamily ABD1_15980 3696e4c12ea09e9d128cfd0d6055dc60 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 309 4.9E-36 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABD1_00640 2ed8bc510c241cf9ee5e24ecc99d75bc 206 Pfam PF02397 Bacterial sugar transferase 3 177 2.3E-64 T 12-10-2018 IPR003362 Bacterial sugar transferase ABD1_26150 74f5fbfb135ed68a5311041fae9f3482 305 SMART SM00849 71 279 4.0E-27 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_26150 74f5fbfb135ed68a5311041fae9f3482 305 SUPERFAMILY SSF56281 13 291 5.63E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_26150 74f5fbfb135ed68a5311041fae9f3482 305 Gene3D G3DSA:3.60.15.10 15 304 9.3E-104 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABD1_26150 74f5fbfb135ed68a5311041fae9f3482 305 Pfam PF00753 Metallo-beta-lactamase superfamily 70 265 9.0E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase ABD1_18310 ed84886c42a3a1b906ac74880ecca4ee 429 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 4 147 1.8E-33 T 12-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal ABD1_24570 63288209cfa36afd4b91171708eba5a2 127 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 5.4E-31 T 12-10-2018 IPR021490 Protein of unknown function DUF3144 ABD1_14600 2b18b29b13858123a26f390a6c124bdc 313 SUPERFAMILY SSF48452 192 291 2.39E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_14600 2b18b29b13858123a26f390a6c124bdc 313 Gene3D G3DSA:1.25.40.10 159 308 5.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABD1_07700 04291c34ce68347d2af8cd37e5a6636c 220 Pfam PF04315 Elongation factor P hydroxylase 53 214 4.0E-61 T 12-10-2018 IPR007411 Elongation factor P hydroxylase ABD1_08170 1019f127ada96150e32de6ea61bf4cd0 293 PIRSF PIRSF007580 5 292 4.0E-72 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_08170 1019f127ada96150e32de6ea61bf4cd0 293 Pfam PF10118 Predicted metal-dependent hydrolase 19 279 3.6E-77 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_28640 d54d57fef301c99d2774bb8068ffaf98 100 SUPERFAMILY SSF54909 1 96 6.17E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel ABD1_28640 d54d57fef301c99d2774bb8068ffaf98 100 Gene3D G3DSA:3.30.70.1060 1 97 1.0E-30 T 12-10-2018 ABD1_28640 d54d57fef301c99d2774bb8068ffaf98 100 Pfam PF03795 YCII-related domain 3 94 6.6E-20 T 12-10-2018 IPR005545 YCII-related ABD1_10990 2cda4171148d7a356c60646a1e762ef7 235 Gene3D G3DSA:3.30.450.20 3 180 5.3E-21 T 12-10-2018 ABD1_10990 2cda4171148d7a356c60646a1e762ef7 235 Pfam PF02743 Cache domain 7 207 3.0E-15 T 12-10-2018 IPR033479 Double Cache domain 1 ABD1_33000 901d911473a7dbd44972b470b03c8534 207 PIRSF PIRSF006324 1 207 3.0E-52 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_33000 901d911473a7dbd44972b470b03c8534 207 Pfam PF01810 LysE type translocator 16 203 4.8E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_19470 aebefb6917d9806386166cd194404c08 491 PIRSF PIRSF006446 1 292 4.4E-101 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABD1_19470 aebefb6917d9806386166cd194404c08 491 PIRSF PIRSF006446 315 489 7.2E-31 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABD1_19470 aebefb6917d9806386166cd194404c08 491 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 1 466 5.0E-156 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABD1_21990 1a28b90d5b4756a336adf12e11693462 214 SUPERFAMILY SSF159594 17 199 2.88E-22 T 12-10-2018 ABD1_21990 1a28b90d5b4756a336adf12e11693462 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 20 192 1.0E-25 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component ABD1_25770 fdd95779230a94e96fabb83b5cbc2fef 100 Pfam PF04138 GtrA-like protein 2 98 3.1E-12 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 ABD1_09560 cb6286eced4dd527fb285920eb1384fb 182 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 174 3.8E-54 T 12-10-2018 IPR018715 Protein of unknown function DUF2239 ABD1_10320 83da5b8f8fa165d18c156fa4d6956d72 132 Pfam PF13554 Bacteriophage related domain of unknown function 9 97 1.3E-8 T 12-10-2018 IPR025395 Protein of unknown function DUF4128 ABD1_02930 747331f17f13c8b589ee0c394c9ca312 699 Pfam PF04632 Fusaric acid resistance protein family 15 678 1.1E-146 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 ABD1_26140 42551f1026da6815f32f2a4ddf462d13 306 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 283 1.7E-41 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABD1_26140 42551f1026da6815f32f2a4ddf462d13 306 SUPERFAMILY SSF51695 35 294 5.76E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABD1_26140 42551f1026da6815f32f2a4ddf462d13 306 Gene3D G3DSA:3.20.20.190 36 304 3.4E-93 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABD1_07390 fd7f9a0eda120a62896ef3c3c0cca162 197 Pfam PF01810 LysE type translocator 12 181 2.2E-12 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_02670 f49487169a0014168d33546f96f09186 118 Pfam PF13441 YMGG-like Gly-zipper 74 115 4.0E-7 T 12-10-2018 IPR027367 YMGG-like Gly-zipper ABD1_04800 18f31f80341b3a75414a9c787c54aab6 86 Gene3D G3DSA:1.10.1200.10 3 86 1.0E-19 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_04800 18f31f80341b3a75414a9c787c54aab6 86 Pfam PF00550 Phosphopantetheine attachment site 6 80 1.0E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABD1_04800 18f31f80341b3a75414a9c787c54aab6 86 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 80 0.004 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABD1_04800 18f31f80341b3a75414a9c787c54aab6 86 SUPERFAMILY SSF47336 2 83 1.18E-12 T 12-10-2018 IPR036736 ACP-like superfamily ABD1_15680 94c43ebf898f0083d155299c554c9b45 113 Pfam PF07238 PilZ domain 11 75 4.0E-6 T 12-10-2018 IPR009875 PilZ domain GO:0035438 ABD1_15680 94c43ebf898f0083d155299c554c9b45 113 Gene3D G3DSA:2.40.10.220 2 113 2.2E-33 T 12-10-2018 ABD1_06170 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 11 79 2.4E-5 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 ABD1_06170 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 108 177 8.1E-16 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 ABD1_21160 adef2e43062d4d8335f6ffe7397993da 302 Pfam PF00849 RNA pseudouridylate synthase 100 248 3.4E-21 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_21160 adef2e43062d4d8335f6ffe7397993da 302 SUPERFAMILY SSF55120 85 298 1.58E-49 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_21160 adef2e43062d4d8335f6ffe7397993da 302 Gene3D G3DSA:3.30.2350.10 85 299 3.7E-44 T 12-10-2018 ABD1_21160 adef2e43062d4d8335f6ffe7397993da 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABD1_01250 5b31dabc6f12ddcfd829ebf3cbc23dfe 254 Gene3D G3DSA:3.90.470.20 25 231 7.8E-43 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_01250 5b31dabc6f12ddcfd829ebf3cbc23dfe 254 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 111 206 2.3E-14 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_01250 5b31dabc6f12ddcfd829ebf3cbc23dfe 254 SUPERFAMILY SSF56214 110 226 6.1E-19 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_01250 5b31dabc6f12ddcfd829ebf3cbc23dfe 254 SUPERFAMILY SSF56214 7 102 1.15E-18 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_01250 5b31dabc6f12ddcfd829ebf3cbc23dfe 254 Gene3D G3DSA:3.90.470.20 111 221 7.8E-43 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABD1_17350 6860c5781221edff547074c349a6a3af 412 Gene3D G3DSA:3.50.50.60 4 322 2.2E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_17350 6860c5781221edff547074c349a6a3af 412 Gene3D G3DSA:3.30.9.40 65 271 2.2E-127 T 12-10-2018 ABD1_17350 6860c5781221edff547074c349a6a3af 412 SUPERFAMILY SSF51905 2 355 1.49E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_33930 50d23e80c980c11a7c67c564eb4d0ad4 331 Gene3D G3DSA:1.20.1510.10 25 244 5.5E-32 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_33930 50d23e80c980c11a7c67c564eb4d0ad4 331 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 319 6.6E-66 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_33930 50d23e80c980c11a7c67c564eb4d0ad4 331 Pfam PF01545 Cation efflux family 31 244 4.1E-39 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABD1_33930 50d23e80c980c11a7c67c564eb4d0ad4 331 SUPERFAMILY SSF161111 24 245 4.32E-48 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABD1_22850 c3c9d2ed44b85e24fba8822dbd5ec158 56 Gene3D G3DSA:2.10.70.10 19 56 8.6E-18 T 12-10-2018 ABD1_22850 c3c9d2ed44b85e24fba8822dbd5ec158 56 Pfam PF10636 Hemin uptake protein hemP 21 56 1.4E-16 T 12-10-2018 IPR019600 Hemin uptake protein HemP ABD1_08710 81941b3478fe42e3604416fefb19e608 235 Pfam PF06912 Protein of unknown function (DUF1275) 21 216 5.9E-31 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 ABD1_17020 3813b7c41bd5d3c331426ad7bd9154b6 263 Pfam PF01925 Sulfite exporter TauE/SafE 8 253 9.5E-39 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_13290 2ccd1dc07cdb629cb9ec089a592995ad 189 Pfam PF02677 Uncharacterized BCR, COG1636 2 161 1.4E-53 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 ABD1_04880 dcc06579e637fc2e114732b86a390444 209 SUPERFAMILY SSF89392 30 194 9.81E-16 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABD1_04880 dcc06579e637fc2e114732b86a390444 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 195 8.9E-13 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ABD1_04880 dcc06579e637fc2e114732b86a390444 209 Gene3D G3DSA:2.50.20.10 27 205 5.9E-22 T 12-10-2018 ABD1_00800 785dc0aabb9d51bb9994161cbeb3bcd2 191 Pfam PF13548 Domain of unknown function (DUF4126) 7 179 1.1E-48 T 12-10-2018 IPR025196 Domain of unknown function DUF4126 ABD1_10920 a96e7ff89a45c3c36a28d0f528cececd 122 Pfam PF16068 Domain of unknown function (DUF4810) 24 109 2.3E-29 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats ABD1_10920 a96e7ff89a45c3c36a28d0f528cececd 122 PIRSF PIRSF020555 2 119 2.0E-28 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats ABD1_24980 6cd80cc380f8f91e86f1c01c66793933 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 29 141 3.5E-20 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABD1_24980 6cd80cc380f8f91e86f1c01c66793933 145 Pfam PF03061 Thioesterase superfamily 57 133 7.7E-9 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABD1_24980 6cd80cc380f8f91e86f1c01c66793933 145 Gene3D G3DSA:3.10.129.10 5 145 8.9E-37 T 12-10-2018 ABD1_24980 6cd80cc380f8f91e86f1c01c66793933 145 SUPERFAMILY SSF54637 5 141 1.5E-35 T 12-10-2018 IPR029069 HotDog domain superfamily ABD1_16370 df03b8888ee3249fa35fa2f2a512c88e 256 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 221 243 5.5E-6 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 ABD1_14220 9dd371cd18f715d7ffa93a18e44197cb 559 Gene3D G3DSA:3.40.1080.10 39 247 1.6E-16 T 12-10-2018 ABD1_14220 9dd371cd18f715d7ffa93a18e44197cb 559 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 12 559 1.9E-291 T 12-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 ABD1_14220 9dd371cd18f715d7ffa93a18e44197cb 559 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 12 559 5.2E-302 T 12-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 ABD1_14220 9dd371cd18f715d7ffa93a18e44197cb 559 SUPERFAMILY SSF100950 43 283 8.37E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_14220 9dd371cd18f715d7ffa93a18e44197cb 559 SUPERFAMILY SSF100950 231 497 2.81E-20 T 12-10-2018 IPR037171 NagB/RpiA transferase-like ABD1_27910 91b80fb70ba7287a71b643c1720c8c21 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 155 7.8E-31 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 ABD1_27910 91b80fb70ba7287a71b643c1720c8c21 161 PIRSF PIRSF030820 3 160 5.7E-32 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 ABD1_27370 d430e10471efc346025f399d6230786d 397 SUPERFAMILY SSF90123 98 392 1.47E-8 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABD1_27370 d430e10471efc346025f399d6230786d 397 Pfam PF05992 SbmA/BacA-like family 84 396 3.9E-156 T 12-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 ABD1_33220 2747f5540cc8841b1b6fe1b5cf89997a 312 Gene3D G3DSA:1.20.1530.20 1 309 6.7E-120 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily ABD1_33220 2747f5540cc8841b1b6fe1b5cf89997a 312 Pfam PF01758 Sodium Bile acid symporter family 43 219 2.5E-46 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABD1_15830 f941795c3f7c3839c7dbc8e13ae521f0 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 2.7E-16 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 ABD1_13000 4c9d7e8e131f1f8ec85a19f119e8f665 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_13000 4c9d7e8e131f1f8ec85a19f119e8f665 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_13000 4c9d7e8e131f1f8ec85a19f119e8f665 186 Gene3D G3DSA:1.10.357.10 3 185 4.8E-25 T 12-10-2018 ABD1_13000 4c9d7e8e131f1f8ec85a19f119e8f665 186 SUPERFAMILY SSF46689 6 74 2.92E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_13000 4c9d7e8e131f1f8ec85a19f119e8f665 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.7E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_23700 058202aac9f2b4199179b597dfbfa375 244 SUPERFAMILY SSF53474 5 230 8.18E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_23700 058202aac9f2b4199179b597dfbfa375 244 Pfam PF00975 Thioesterase domain 8 234 1.8E-30 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 ABD1_23700 058202aac9f2b4199179b597dfbfa375 244 Gene3D G3DSA:3.40.50.1820 5 243 5.3E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 PIRSF PIRSF001467 1 169 1.8E-28 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 Gene3D G3DSA:2.40.100.10 3 167 1.7E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 SUPERFAMILY SSF50891 6 167 4.97E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 4.8E-50 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 2.1E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 2.1E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_21080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 2.1E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABD1_20820 46da3a33411205bf6921372e0789d868 184 Gene3D G3DSA:1.10.357.10 4 179 1.1E-23 T 12-10-2018 ABD1_20820 46da3a33411205bf6921372e0789d868 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20820 46da3a33411205bf6921372e0789d868 184 SUPERFAMILY SSF46689 6 73 2.36E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABD1_20820 46da3a33411205bf6921372e0789d868 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_20820 46da3a33411205bf6921372e0789d868 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABD1_08840 b08c483471bcd853a4ab7db30eb42558 204 Pfam PF01914 MarC family integral membrane protein 5 200 4.3E-17 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ABD1_03600 3321134cf75eac158ea2db9404126155 110 Gene3D G3DSA:3.20.160.10 1 110 1.7E-45 T 12-10-2018 IPR038604 Type III effector HopJ superfamily ABD1_03600 3321134cf75eac158ea2db9404126155 110 Pfam PF08888 HopJ type III effector protein 3 107 8.1E-43 T 12-10-2018 IPR014984 HopJ type III effector protein ABD1_18240 869c9284defb875a00a06e5bf809fddd 525 SUPERFAMILY SSF103473 11 506 4.71E-30 T 12-10-2018 IPR036259 MFS transporter superfamily ABD1_18240 869c9284defb875a00a06e5bf809fddd 525 Pfam PF07690 Major Facilitator Superfamily 13 408 1.9E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABD1_22210 b867e9971b60abde50aa3c37dbfc782d 382 Pfam PF00561 alpha/beta hydrolase fold 95 360 2.1E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_22210 b867e9971b60abde50aa3c37dbfc782d 382 SUPERFAMILY SSF53474 64 379 5.64E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_04630 3f13a1377cb38b2f344a9e290c99dda8 256 Gene3D G3DSA:3.40.50.150 6 244 3.3E-20 T 12-10-2018 ABD1_04630 3f13a1377cb38b2f344a9e290c99dda8 256 SUPERFAMILY SSF53335 30 247 4.54E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABD1_04630 3f13a1377cb38b2f344a9e290c99dda8 256 Pfam PF04072 Leucine carboxyl methyltransferase 34 157 5.8E-11 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 ABD1_32050 d3a93693ef2dc9647c7d3f4ded83e3af 191 Pfam PF05656 Protein of unknown function (DUF805) 20 138 1.9E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 ABD1_05680 608db00350c924b2c1dc548bb280a151 223 Pfam PF14103 Domain of unknown function (DUF4276) 8 219 2.4E-44 T 12-10-2018 IPR025455 Protein of unknown function DUF4276 ABD1_33110 a60e030d39f2233c36621e39c3dae55f 355 Pfam PF01757 Acyltransferase family 23 334 2.2E-24 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ABD1_27670 1937ce439bf814c72e1e330bfc3f7940 118 Pfam PF04343 Protein of unknown function, DUF488 4 112 5.7E-34 T 12-10-2018 IPR007438 Protein of unknown function DUF488 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 Gene3D G3DSA:1.10.287.70 27 249 1.9E-57 T 12-10-2018 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 SUPERFAMILY SSF81324 27 246 3.78E-47 T 12-10-2018 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 159 182 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 21 49 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 63 86 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 219 245 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 130 156 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 190 212 9.2E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ABD1_21260 89ba07837a92031771cbb038fa3fb5b0 327 Pfam PF00520 Ion transport protein 28 246 4.4E-29 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 ABD1_01370 547a4d3dca2683004a41c1b14c67fea6 101 Gene3D G3DSA:1.10.225.20 1 95 1.2E-32 T 12-10-2018 ABD1_01370 547a4d3dca2683004a41c1b14c67fea6 101 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 94 3.2E-35 T 12-10-2018 IPR024476 Protein of unknown function DUF3861 ABD1_06320 220f67591973bb220904eb68c37c3581 83 Gene3D G3DSA:3.30.300.90 1 82 4.0E-25 T 12-10-2018 ABD1_06320 220f67591973bb220904eb68c37c3581 83 PIRSF PIRSF003113 1 82 7.7E-21 T 12-10-2018 IPR002634 BolA protein ABD1_06320 220f67591973bb220904eb68c37c3581 83 Pfam PF01722 BolA-like protein 22 74 1.8E-12 T 12-10-2018 IPR002634 BolA protein ABD1_06320 220f67591973bb220904eb68c37c3581 83 SUPERFAMILY SSF82657 2 78 4.58E-23 T 12-10-2018 IPR036065 BolA-like superfamily ABD1_23340 ec2ad25baed4e11aaf9afe3037db2cbb 178 Pfam PF03412 Peptidase C39 family 13 66 1.8E-8 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ABD1_14700 606811dd0ec968c3bf827ce75b19d0a3 210 Pfam PF01810 LysE type translocator 14 208 2.2E-18 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_06280 4460f8a47409c448fb5756145b54cba5 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 313 1.6E-23 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABD1_06280 4460f8a47409c448fb5756145b54cba5 322 SMART SM00331 126 320 1.3E-11 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABD1_06280 4460f8a47409c448fb5756145b54cba5 322 SUPERFAMILY SSF81606 141 304 7.19E-5 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABD1_06280 4460f8a47409c448fb5756145b54cba5 322 Gene3D G3DSA:3.60.40.10 94 320 2.3E-42 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABD1_10860 574cb20a446ef85c09e4b7b9c7f85253 292 Pfam PF03180 NLPA lipoprotein 46 281 2.7E-63 T 12-10-2018 IPR004872 Lipoprotein NlpA family ABD1_10860 574cb20a446ef85c09e4b7b9c7f85253 292 Gene3D G3DSA:3.40.190.10 46 273 3.0E-73 T 12-10-2018 ABD1_10860 574cb20a446ef85c09e4b7b9c7f85253 292 SUPERFAMILY SSF53850 41 282 3.34E-64 T 12-10-2018 ABD1_10860 574cb20a446ef85c09e4b7b9c7f85253 292 Gene3D G3DSA:3.40.190.10 121 232 3.0E-73 T 12-10-2018 ABD1_08660 e6e0b6f6efe0126b70e25d64f0e540e6 448 Pfam PF03573 outer membrane porin, OprD family 30 447 1.0E-22 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 ABD1_08660 e6e0b6f6efe0126b70e25d64f0e540e6 448 Gene3D G3DSA:2.40.160.10 20 448 1.8E-45 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_27340 2e936dd8e3fb09a982a01918f27e2c23 355 Pfam PF06674 Protein of unknown function (DUF1176) 26 348 1.9E-95 T 12-10-2018 IPR009560 Protein of unknown function DUF1176 ABD1_26120 ca0ebae34e244f65020344dbbf85a314 191 Pfam PF13430 Domain of unknown function (DUF4112) 19 118 1.9E-21 T 12-10-2018 IPR025187 Protein of unknown function DUF4112 ABD1_03520 a746a0f044393423f16435da0a36ffbc 334 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 4.6E-12 T 12-10-2018 IPR025139 Domain of unknown function DUF4062 ABD1_27520 eadeae76186b9e3a484d1171c3976b0a 47 Pfam PF08085 Entericidin EcnA/B family 20 40 6.3E-10 T 12-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 ABD1_03010 465ef2961d0219b602a234574ce82375 304 Pfam PF00892 EamA-like transporter family 151 282 1.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_03010 465ef2961d0219b602a234574ce82375 304 Pfam PF00892 EamA-like transporter family 7 138 7.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABD1_03010 465ef2961d0219b602a234574ce82375 304 SUPERFAMILY SSF103481 41 138 2.35E-10 T 12-10-2018 ABD1_11480 477ec0020238a5dd3f3278e5ff9c2736 480 Pfam PF13264 Domain of unknown function (DUF4055) 262 400 8.9E-37 T 12-10-2018 IPR025129 Domain of unknown function DUF4055 ABD1_20280 d0efdf4c11ca5fa7ffe9bc2b99bc64b5 189 Gene3D G3DSA:3.90.550.10 1 185 3.8E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_20280 d0efdf4c11ca5fa7ffe9bc2b99bc64b5 189 Pfam PF12804 MobA-like NTP transferase domain 1 135 1.1E-15 T 12-10-2018 IPR025877 MobA-like NTP transferase ABD1_20280 d0efdf4c11ca5fa7ffe9bc2b99bc64b5 189 SUPERFAMILY SSF53448 1 175 6.44E-15 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABD1_23190 b5d36e19931aa385390f9aaaf3e7333b 150 Pfam PF06127 Protein of unknown function (DUF962) 1 135 1.3E-21 T 12-10-2018 IPR009305 Protein of unknown function DUF962 ABD1_30410 c32f689b3e30baab9b89a33ed5a3d8e7 147 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 7.6E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 ABD1_18900 d961681c6a3db41a73ae7b78ce239440 429 Gene3D G3DSA:2.40.160.10 28 418 1.8E-140 T 12-10-2018 IPR023614 Porin domain superfamily ABD1_18900 d961681c6a3db41a73ae7b78ce239440 429 Pfam PF03573 outer membrane porin, OprD family 36 417 4.8E-73 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 ABD1_08480 ec945eedec83c1674ca10b5ede314179 125 Gene3D G3DSA:3.10.180.10 3 121 1.2E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_08480 ec945eedec83c1674ca10b5ede314179 125 SUPERFAMILY SSF54593 3 121 8.53E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABD1_11710 4f15d9285365ebc0b5fade68f2168cb3 1632 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 138 211 1.2E-25 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal ABD1_10640 7b99a44102cd86df7d23832de380289b 202 Pfam PF01810 LysE type translocator 19 202 1.9E-37 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_26360 a15c335180986b318e8aab5a56d69c51 195 SUPERFAMILY SSF58113 70 191 8.5E-7 T 12-10-2018 ABD1_26360 a15c335180986b318e8aab5a56d69c51 195 Gene3D G3DSA:1.20.120.20 2 128 4.3E-12 T 12-10-2018 ABD1_22000 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 181 241 1.4E-7 T 12-10-2018 IPR003399 Mce/MlaD ABD1_22000 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 66 156 2.4E-10 T 12-10-2018 IPR003399 Mce/MlaD ABD1_22000 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 311 406 3.0E-15 T 12-10-2018 IPR003399 Mce/MlaD ABD1_26460 39de3d738c2dc926d196dcc39a8bd979 299 Pfam PF04228 Putative neutral zinc metallopeptidase 1 295 4.4E-112 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative ABD1_17830 9acd38306e5df06ef0b8a8e3a3cdf53b 443 Pfam PF07804 HipA-like C-terminal domain 167 365 2.7E-28 T 12-10-2018 IPR012893 HipA-like, C-terminal ABD1_17830 9acd38306e5df06ef0b8a8e3a3cdf53b 443 PIRSF PIRSF028135 1 443 2.2E-158 T 12-10-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like ABD1_19400 80d433c75316fad1362f6867966186d5 399 Pfam PF02386 Cation transport protein 2 382 4.0E-56 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ABD1_19500 3f471c77266e022196a1b8b208114487 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 217 3.6E-30 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 ABD1_22310 82c1069434920973722f3b1f795e8b97 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 9 70 1.9E-23 T 12-10-2018 IPR018684 Protein of unknown function DUF2171 ABD1_23640 f8f4336acf6fffc394d86b57a9c8b945 156 Pfam PF11220 Protein of unknown function (DUF3015) 19 155 3.6E-40 T 12-10-2018 IPR021383 Protein of unknown function DUF3015 ABD1_13940 70e6e18c165b66cf5d2cd89721bfa534 538 Gene3D G3DSA:1.10.4160.10 17 479 1.7E-15 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily ABD1_03220 bbb3f8689591d38ab7209aedff27eb37 539 Pfam PF03109 ABC1 family 114 231 4.7E-33 T 12-10-2018 IPR004147 UbiB domain ABD1_03220 bbb3f8689591d38ab7209aedff27eb37 539 SUPERFAMILY SSF56112 95 435 9.08E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily ABD1_19450 092ba071f8a363d17196d6028c745b28 102 Pfam PF00355 Rieske [2Fe-2S] domain 2 83 5.8E-14 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABD1_19450 092ba071f8a363d17196d6028c745b28 102 Gene3D G3DSA:2.102.10.10 1 102 3.4E-17 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_19450 092ba071f8a363d17196d6028c745b28 102 SUPERFAMILY SSF50022 3 100 2.88E-22 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABD1_23870 4cd7f030c5110b7352e69a922df69b08 207 Pfam PF08348 YheO-like PAS domain 9 119 8.2E-35 T 12-10-2018 IPR013559 YheO-like ABD1_23870 4cd7f030c5110b7352e69a922df69b08 207 Pfam PF13309 HTH domain 144 204 3.6E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain ABD1_23870 4cd7f030c5110b7352e69a922df69b08 207 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 5 130 4.0E-70 T 12-10-2018 IPR013559 YheO-like ABD1_07810 aca12d8d38caea1f43f6d4bcb8443f30 186 Pfam PF14345 GDYXXLXY protein 14 162 8.0E-18 T 12-10-2018 IPR025833 GDYXXLXY protein ABD1_11610 956829b4af5e8524cb85ef7699318baa 132 Pfam PF13554 Bacteriophage related domain of unknown function 9 97 1.6E-7 T 12-10-2018 IPR025395 Protein of unknown function DUF4128 ABD1_01390 8adcde359c183a13000c40dd191e9c84 135 SUPERFAMILY SSF82784 16 132 7.33E-24 T 12-10-2018 IPR036102 OsmC/Ohr superfamily ABD1_01390 8adcde359c183a13000c40dd191e9c84 135 Gene3D G3DSA:3.30.300.20 4 135 3.6E-25 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta ABD1_01390 8adcde359c183a13000c40dd191e9c84 135 Pfam PF02566 OsmC-like protein 38 129 3.1E-14 T 12-10-2018 IPR003718 OsmC/Ohr family ABD1_15480 61caa63455da34fc81b534222673d2aa 152 Gene3D G3DSA:1.10.357.10 1 149 2.9E-23 T 12-10-2018 ABD1_15480 61caa63455da34fc81b534222673d2aa 152 SUPERFAMILY SSF48498 40 145 1.74E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABD1_27160 4521174afc0c675725a28632e3b44b5d 330 Pfam PF00487 Fatty acid desaturase 57 305 2.6E-36 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_04520 31e1a3526dee957b5140376977d2cd05 184 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 104 156 3.6E-9 T 12-10-2018 IPR018637 Domain of unknown function DUF2059 ABD1_14750 2bdbd0ada3ce18a0ce83d87f4cfcde02 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 2.0E-9 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD ABD1_21330 b4ae8a653822b681228a245fadd1016f 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 2.3E-41 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 ABD1_21330 b4ae8a653822b681228a245fadd1016f 211 SUPERFAMILY SSF47240 55 180 8.67E-16 T 12-10-2018 IPR009078 Ferritin-like superfamily ABD1_21330 b4ae8a653822b681228a245fadd1016f 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 29.325 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 ABD1_04270 a216c8b098c9eea72b4dc04eb9012f74 351 Pfam PF13387 Domain of unknown function (DUF4105) 137 289 1.1E-44 T 12-10-2018 IPR025178 Domain of unknown function DUF4105 ABD1_17370 eafb257e564f4a6e4df0b6e84a9a26eb 315 Pfam PF13557 Putative MetA-pathway of phenol degradation 60 311 5.4E-62 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative ABD1_16720 ae87cb04c3fcd68fb5268682d9d3016a 361 SUPERFAMILY SSF53474 49 354 2.86E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_16720 ae87cb04c3fcd68fb5268682d9d3016a 361 Pfam PF00561 alpha/beta hydrolase fold 74 336 1.4E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABD1_16720 ae87cb04c3fcd68fb5268682d9d3016a 361 Gene3D G3DSA:3.40.50.1820 41 360 3.5E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold ABD1_28160 23ca91ec2d52ec98cd05be2810a5cf9a 331 Pfam PF10974 Protein of unknown function (DUF2804) 7 330 4.8E-64 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 ABD1_31160 2b37eafe3307d262305f90715fdeff60 182 Pfam PF05656 Protein of unknown function (DUF805) 16 128 4.0E-21 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 ABD1_10240 ffac33a7849f3bbe6b177b5f0764a38d 104 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 19 99 4.0E-18 T 12-10-2018 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family ABD1_03370 13661e2bd3110c72970cc6b79f025bc3 203 Pfam PF01810 LysE type translocator 14 200 2.9E-26 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABD1_21580 3fe735d81627529aa01946090c03088a 154 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 28 149 9.7E-23 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 ABD1_21580 3fe735d81627529aa01946090c03088a 154 Pfam PF13994 PgaD-like protein 26 148 6.0E-22 T 12-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 ABD1_02860 d0c733718a1483be3e68484bfd5a28ce 176 Gene3D G3DSA:3.90.1720.10 58 174 2.0E-30 T 12-10-2018 ABD1_09730 5e1cf481a0afd0dd1cad7f7b5c33b05e 189 Pfam PF04955 HupE / UreJ protein 12 185 3.6E-26 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein ABD1_09730 5e1cf481a0afd0dd1cad7f7b5c33b05e 189 PIRSF PIRSF016919 3 189 3.7E-26 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein ABD1_25320 ac70844874320e38155c725a653c8df6 176 Gene3D G3DSA:3.40.50.620 1 167 1.4E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABD1_25320 ac70844874320e38155c725a653c8df6 176 SUPERFAMILY SSF52374 2 148 1.07E-13 T 12-10-2018 ABD1_01900 32efb943c3f746edeb0bda59850251ae 214 Pfam PF03458 UPF0126 domain 5 79 6.1E-20 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 ABD1_01900 32efb943c3f746edeb0bda59850251ae 214 Pfam PF03458 UPF0126 domain 91 163 8.8E-20 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 ABD1_09260 286528579e8553915323dd8605144d3c 511 Pfam PF01384 Phosphate transporter family 51 500 2.8E-84 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ABD1_33200 9792b30bf96bce8855fa4005e748b2dc 156 Pfam PF04463 Protein of unknown function (DUF523) 3 146 3.3E-40 T 12-10-2018 IPR007553 Domain of unknown function DUF523 ABD1_16510 bf7be980b3eb5b2a4f571dd21bc69900 308 Pfam PF01925 Sulfite exporter TauE/SafE 7 264 2.9E-48 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_12470 9d8345e307d6fc81aa547b04b37963d4 368 Pfam PF04233 Phage Mu protein F like protein 153 264 1.2E-10 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_12470 9d8345e307d6fc81aa547b04b37963d4 368 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 155 268 1.6E-17 T 12-10-2018 IPR006528 Phage head morphogenesis domain ABD1_21680 f659c677cf974c12fb95763dc98fb530 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 6.1E-38 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 ABD1_21680 f659c677cf974c12fb95763dc98fb530 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 5.2E-17 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ABD1_22010 5f7183ab26eae454861c3ab74f2b558b 268 Pfam PF04403 Paraquat-inducible protein A 72 232 9.1E-52 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like ABD1_09660 64f1e0644ada741d7a8a965648650f11 245 Hamap MF_01384 Urease accessory protein UreD [ureD]. 3 229 21.034 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 ABD1_09660 64f1e0644ada741d7a8a965648650f11 245 Pfam PF01774 UreD urease accessory protein 13 217 4.3E-45 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 ABD1_00820 8445a07e86fcd8c5d44e8fea0f2771e5 159 Gene3D G3DSA:1.20.1480.40 19 159 3.2E-60 T 12-10-2018 ABD1_00820 8445a07e86fcd8c5d44e8fea0f2771e5 159 Pfam PF16133 Domain of unknown function (DUF4844) 36 147 2.5E-19 T 12-10-2018 IPR032301 Protein of unknown function DUF4844 ABD1_03960 8231bea602f5b8355217cd318d7d7b8d 419 Gene3D G3DSA:1.20.58.2200 356 418 2.8E-7 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily ABD1_15020 275a03471fb8776e75c0cee1795da11a 145 Pfam PF05232 Chlorhexidine efflux transporter 3 65 2.9E-19 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter ABD1_15020 275a03471fb8776e75c0cee1795da11a 145 Pfam PF05232 Chlorhexidine efflux transporter 71 133 4.1E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter ABD1_06000 5179e61b3e983b123e87f1fff8e711f6 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 4 113 6.0E-7 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 ABD1_06000 5179e61b3e983b123e87f1fff8e711f6 142 Pfam PF09335 SNARE associated Golgi protein 36 133 1.9E-13 T 12-10-2018 IPR032816 SNARE associated Golgi protein ABD1_17660 bbcfc8a7ee976869a15b35d1168dfd24 317 Pfam PF16223 Domain of unknown function (DUF4882) 49 315 5.3E-136 T 12-10-2018 IPR032620 Protein of unknown function DUF4882 ABD1_05030 28d973050975d47a64e240ffca298af3 243 Pfam PF12811 Bax inhibitor 1 like 5 240 3.4E-62 T 12-10-2018 IPR010539 Protein of unknown function UCP009160 ABD1_05030 28d973050975d47a64e240ffca298af3 243 PIRSF PIRSF009160 1 243 1.6E-78 T 12-10-2018 IPR010539 Protein of unknown function UCP009160 ABD1_10190 d42694cfc4ae5cfaa7dff6cdf08693dc 480 Pfam PF13264 Domain of unknown function (DUF4055) 262 401 1.5E-34 T 12-10-2018 IPR025129 Domain of unknown function DUF4055 ABD1_17290 2986dd14b52dc88676c092ea55b01272 473 Pfam PF02447 GntP family permease 65 466 1.2E-5 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABD1_31510 097e45cff5e76a23bc024269b34eff51 165 Pfam PF13503 Domain of unknown function (DUF4123) 21 141 3.1E-16 T 12-10-2018 IPR025391 Domain of unknown function DUF4123 ABD1_14450 ed3bc85e98b30d8e8fa98542ebec5101 293 SUPERFAMILY SSF51197 9 282 1.47E-90 T 12-10-2018 ABD1_14450 ed3bc85e98b30d8e8fa98542ebec5101 293 Gene3D G3DSA:3.60.130.10 5 285 1.5E-91 T 12-10-2018 ABD1_14450 ed3bc85e98b30d8e8fa98542ebec5101 293 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 274 2.0E-65 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 ABD1_11400 84f86557d1d836d5fb226bc0b5887217 100 Pfam PF06356 Protein of unknown function (DUF1064) 2 80 1.7E-15 T 12-10-2018 IPR009414 Protein of unknown function DUF1064 ABD1_25340 86026dfb35af0ff3f5779bec6094e597 105 SUPERFAMILY SSF102705 2 100 2.39E-23 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ABD1_25340 86026dfb35af0ff3f5779bec6094e597 105 Gene3D G3DSA:3.30.70.120 1 103 4.2E-41 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABD1_02460 0d05ea7d20b60d9d87c6ac926954fa93 255 Gene3D G3DSA:3.40.50.10090 5 227 9.0E-42 T 12-10-2018 ABD1_02460 0d05ea7d20b60d9d87c6ac926954fa93 255 SUPERFAMILY SSF69618 5 230 1.7E-41 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_02460 0d05ea7d20b60d9d87c6ac926954fa93 255 Gene3D G3DSA:3.40.50.10090 32 166 9.0E-42 T 12-10-2018 ABD1_02460 0d05ea7d20b60d9d87c6ac926954fa93 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 226 1.5E-29 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABD1_05350 664ca1206e9209197b1200f5246fc8e2 365 Pfam PF14281 PD-(D/E)XK nuclease superfamily 28 193 7.6E-22 T 12-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 ABD1_20800 2c0f44d792312be0ada287aca32a5385 411 SUPERFAMILY SSF50182 186 252 4.25E-12 T 12-10-2018 IPR010920 LSM domain superfamily ABD1_20800 2c0f44d792312be0ada287aca32a5385 411 Pfam PF00924 Mechanosensitive ion channel 142 395 1.9E-49 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABD1_04110 0cfe908ba60c2b9454df310d971d86d0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 80 148 1.5E-8 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane ABD1_04110 0cfe908ba60c2b9454df310d971d86d0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 22 91 2.2E-10 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane ABD1_04240 7a7dd46fa87a67841b4c201b10778245 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 57 172 1.4E-32 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABD1_14160 1f2bbb89a725df8e7f4c9f092f2523da 143 Pfam PF03788 LrgA family 29 121 3.8E-23 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 ABD1_05740 fbba1f8f18f03c8ec7c9d88a38f389eb 104 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 99 6.0E-35 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ABD1_07680 ea3b080276623ec7615600eb34b067b4 263 Pfam PF02616 Segregation and condensation protein ScpA 53 142 1.2E-13 T 12-10-2018 IPR003768 Segregation and condensation protein A ABD1_27460 d6ebb56ee456ef845661e280a96f0a73 191 Pfam PF14317 YcxB-like protein 108 182 1.4E-20 T 12-10-2018 IPR025588 YcxB-like protein ABD1_p00040 5257f462b80872f175af374fa4717b10 118 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 105 1.7E-24 T 12-10-2018 IPR009241 Toxin HigB-like ABD1_18650 21f408052e6776463c792b3700055385 264 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 264 3.2E-39 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ABD1_18650 21f408052e6776463c792b3700055385 264 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 7 264 1.2E-39 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ABD1_26670 14cc7e4108a7e9cd2b3cd1368d06c8f4 149 Gene3D G3DSA:3.30.1050.10 2 106 4.1E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ABD1_26670 14cc7e4108a7e9cd2b3cd1368d06c8f4 149 SUPERFAMILY SSF55718 22 103 1.68E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ABD1_01320 8fc06c145a2fb2b14a0446f8c880e179 145 Pfam PF07681 DoxX 23 100 4.2E-17 T 12-10-2018 IPR032808 DoxX family ABD1_00390 a3694bcd60af605c3791c3589ffbd052 382 Pfam PF00487 Fatty acid desaturase 75 341 3.8E-32 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABD1_29180 989430d65a8bd3efdfd27e0829b3dec7 237 Pfam PF11306 Protein of unknown function (DUF3108) 26 232 2.2E-23 T 12-10-2018 IPR021457 Protein of unknown function DUF3108 ABD1_10690 d4a9032aeadaa3b63006caf8010ff778 235 Pfam PF04972 BON domain 124 186 0.0067 T 12-10-2018 IPR007055 BON domain ABD1_10690 d4a9032aeadaa3b63006caf8010ff778 235 Pfam PF04972 BON domain 60 113 4.6E-11 T 12-10-2018 IPR007055 BON domain ABD1_29740 0f219defe7f4c3230ebf8ee7a11180eb 315 Pfam PF10118 Predicted metal-dependent hydrolase 22 291 6.2E-66 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_29740 0f219defe7f4c3230ebf8ee7a11180eb 315 PIRSF PIRSF007580 8 311 1.8E-80 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 ABD1_28990 f700c7cc288ee1cb3c0c589edb87149e 601 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 14 354 2.7E-123 T 12-10-2018 IPR010839 Acyclic terpene utilisation ABD1_06410 724e7eae2b67f30e0fc5b78743288fb1 249 Pfam PF13557 Putative MetA-pathway of phenol degradation 22 236 2.0E-5 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative ABD1_18990 1c2821bdf6788ba809b11fc33b708666 137 Pfam PF04143 Sulphur transport 8 127 5.0E-9 T 12-10-2018 IPR007272 Sulphur transport domain ABD1_20910 120f84d77cfc3e632a040d4ea0fc8063 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 4.0E-18 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ABD1_20910 120f84d77cfc3e632a040d4ea0fc8063 234 SUPERFAMILY SSF49354 18 141 1.16E-22 T 12-10-2018 IPR008962 PapD-like superfamily ABD1_20910 120f84d77cfc3e632a040d4ea0fc8063 234 Gene3D G3DSA:2.60.40.10 29 144 2.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold ABD1_07520 6d7f33531af17a78103fafee781987ad 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 4.2E-53 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABD1_08380 67c5ddc303c3d9f8a807a11361a2d8f2 347 SUPERFAMILY SSF161070 27 343 5.36E-10 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 ABD1_11810 5085ebf841584099f73a02b163e6be70 181 Pfam PF09851 Short C-terminal domain 152 178 9.1E-8 T 12-10-2018 IPR018649 SHOCT domain ABD1_17110 831cb3e086da3cb3979469e2574aeefc 81 Gene3D G3DSA:3.30.70.20 15 76 1.4E-16 T 12-10-2018 ABD1_17110 831cb3e086da3cb3979469e2574aeefc 81 Pfam PF13187 4Fe-4S dicluster domain 28 71 3.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABD1_17110 831cb3e086da3cb3979469e2574aeefc 81 SUPERFAMILY SSF54862 7 74 3.72E-14 T 12-10-2018 ABD1_19460 ecfc076675b13a1257dddc3881873341 181 Pfam PF07290 Protein of unknown function (DUF1449) 11 143 4.1E-5 T 12-10-2018 IPR010840 Protein of unknown function DUF1449 ABD1_25920 247020956372614aa6cbe62fc728dff5 130 Pfam PF06803 Protein of unknown function (DUF1232) 35 69 6.2E-13 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 ABD1_30790 f3467e8cc713c02e1bc9c0cf1cda8f7d 213 Pfam PF05137 Fimbrial assembly protein (PilN) 100 187 1.9E-17 T 12-10-2018 IPR007813 Fimbrial assembly PilN ABD1_13630 ab8b332a3445fe12a7cd8e8f081de265 313 SUPERFAMILY SSF48403 129 311 4.2E-18 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABD1_10170 5de70431d6bdeef8e53bd5651d46efa8 156 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 100 5.9E-38 T 12-10-2018 IPR018738 Protein of unknown function DUF2280 ABD1_29870 95c8576b0c77f6fb0095106655ae5065 226 Pfam PF02470 MlaD protein 38 164 4.9E-33 T 12-10-2018 IPR003399 Mce/MlaD ABD1_25530 897728edeae2efb4fc7b2f4a53cf1858 129 Pfam PF11304 Protein of unknown function (DUF3106) 39 89 1.3E-7 T 12-10-2018 IPR021455 Protein of unknown function DUF3106 ABD1_21340 9ce121ddbb8627bf2758983236a6fd88 182 Pfam PF10973 Protein of unknown function (DUF2799) 28 110 1.3E-18 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 ABD1_12340 1f984e7e66df3310d512e63dc3bce5dd 64 Pfam PF02609 Exonuclease VII small subunit 15 59 3.1E-5 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABD1_00950 01418d762e08a87cc69f4498a1a46f01 381 Pfam PF07786 Protein of unknown function (DUF1624) 9 224 3.7E-20 T 12-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 ABD1_21570 8e8e3a73fb8b58a4f7dfe759500b4f0b 187 SUPERFAMILY SSF51905 20 186 4.96E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABD1_01500 f105addd31577ace0146878d81408702 132 Pfam PF03899 ATP synthase I chain 16 112 2.4E-20 T 12-10-2018 IPR005598 ATP synthase protein I ABD1_33820 4f497edaefa048f9ac227404c516e634 416 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 49 382 4.4E-86 T 12-10-2018 IPR010640 Low temperature requirement A ABD1_06920 945203dfd7319fbf7f06a075cb04476d 38 ProDom PD888784 DARCYNIN HOMOLOG 1 29 1.0E-4 T 12-10-2018 ABD1_24480 3d4c1139c9838f6180928642c235d559 338 Pfam PF01594 AI-2E family transporter 15 329 1.0E-12 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like ABD1_26350 95043bb8aa8df3cd1c2331ce20b02474 178 Gene3D G3DSA:2.60.40.1190 25 176 1.9E-5 T 12-10-2018 ABD1_05260 285de42a9b52080722d07c41d862fa4f 169 Gene3D G3DSA:3.90.1720.10 52 168 8.0E-30 T 12-10-2018 ABD1_22130 539199ad90edf0e28b6ffcb5694c1050 172 Pfam PF05229 Spore Coat Protein U domain 26 168 1.9E-27 T 12-10-2018 IPR007893 Spore coat protein U ABD1_02030 22b446501b8514c8244b5309de6a5794 75 Pfam PF04380 Membrane fusogenic activity 5 69 6.9E-13 T 12-10-2018 IPR007475 Membrane fusogenic activity ABD1_22600 98d7899bdda727ef333311c8906adf77 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 1.8E-26 T 12-10-2018 IPR006696 Protein of unknown function DUF423 ABD1_23220 e2a5028c717bbfe20388d8a76280dd1c 104 Pfam PF11948 Protein of unknown function (DUF3465) 46 95 1.3E-12 T 12-10-2018 IPR021856 Protein of unknown function DUF3465 ABD1_32440 3e2bdf4d487a110c1730d28430518328 255 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 254 7.7E-20 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative ABD1_03860 7db6cccac2d1087cde4e239135f6ebeb 84 Pfam PF09834 Predicted membrane protein (DUF2061) 18 68 1.1E-17 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane ABD1_17730 a61e37929719525e7a4ff23588cb2a42 331 Gene3D G3DSA:3.40.190.170 55 243 5.8E-10 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABD1_27350 de9b00627ce15b16fc023e5aa674bede 249 Pfam PF16142 Domain of unknown function (DUF4850) 59 243 2.8E-69 T 12-10-2018 IPR032322 Protein of unknown function DUF4850 ABD1_32340 040fd91a06623f18be2b250bd5f3dcf2 70 Pfam PF08410 Domain of unknown function (DUF1737) 1 50 3.7E-22 T 12-10-2018 IPR013619 Domain of unknown function DUF1737 ABD1_04850 a1775f3a91c681ce636aaa13502d670f 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 110 306 6.9E-15 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABD1_11440 5f677f597a664a7e42b1ae4a2495818f 144 Gene3D G3DSA:3.40.960.10 30 135 4.5E-5 T 12-10-2018 ABD1_07480 5e5f37067b7fc9e1f21363b8dd4227ff 242 Pfam PF01578 Cytochrome C assembly protein 16 239 1.8E-24 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ABD1_01330 12a074a44e2e5f9d44e39444b4e5772c 409 Pfam PF04286 Protein of unknown function (DUF445) 223 342 6.0E-10 T 12-10-2018 IPR007383 Protein of unknown function DUF445 ABD1_07190 767004d4ab4ef619ead05d3396d30f6b 115 Pfam PF05901 Excalibur calcium-binding domain 76 109 1.6E-9 T 12-10-2018 IPR008613 Excalibur calcium-binding domain ABD1_31960 33c9d3536a9b53e3478b597d8548c1f2 110 Pfam PF04341 Protein of unknown function, DUF485 11 96 2.4E-30 T 12-10-2018 IPR007436 Protein of unknown function DUF485 ABD1_28610 e258b0c4336090856907380c4ebba6ec 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 7.0E-62 T 12-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 ABD1_22800 07a4a39525c03ea30c5d88eeb29ef605 90 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 7.6E-32 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 ABD1_14800 1f8f75b68fb72b87194ace9f7efc1938 173 Pfam PF06127 Protein of unknown function (DUF962) 1 147 3.8E-25 T 12-10-2018 IPR009305 Protein of unknown function DUF962 ABD1_24800 167d5da8424df18897a54c45e0738970 233 Pfam PF01988 VIT family 18 225 3.1E-54 T 12-10-2018 IPR008217 Ccc1 family