locus-tag class description DLD53_00175 PF00589 Phage integrase family DLD53_00175 PF13356 Arm DNA-binding domain DLD53_00185 PF00854 POT family DLD53_00195 PF04345 Chorismate lyase DLD53_00200 PF01040 UbiA prenyltransferase family DLD53_00235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DLD53_00235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DLD53_00240 PF01784 NIF3 (NGG1p interacting factor 3) DLD53_00245 PF13180 PDZ domain DLD53_00250 PF01743 Poly A polymerase head domain DLD53_00250 PF12627 Probable RNA and SrmB- binding site of polymerase A DLD53_00255 PF01515 Phosphate acetyl/butaryl transferase DLD53_00255 PF03949 Malic enzyme, NAD binding domain DLD53_00255 PF00390 Malic enzyme, N-terminal domain DLD53_00260 PF00563 EAL domain DLD53_00260 PF00990 Diguanylate cyclase, GGDEF domain DLD53_00260 PF03707 Bacterial signalling protein N terminal repeat DLD53_00275 PF04452 RNA methyltransferase DLD53_00280 PF02219 Methylenetetrahydrofolate reductase DLD53_00285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DLD53_00285 PF05221 S-adenosyl-L-homocysteine hydrolase DLD53_00300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_00300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_00300 PF09317 Domain of unknown function (DUF1974) DLD53_00305 PF04055 Radical SAM superfamily DLD53_00310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLD53_00310 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_00320 PF07690 Major Facilitator Superfamily DLD53_00330 PF00557 Metallopeptidase family M24 DLD53_00335 PF00318 Ribosomal protein S2 DLD53_00340 PF00889 Elongation factor TS DLD53_00350 PF12833 Helix-turn-helix domain DLD53_00370 PF05036 Sporulation related domain DLD53_00370 PF03330 Lytic transglycolase DLD53_00375 PF13406 Transglycosylase SLT domain DLD53_00380 PF01098 Cell cycle protein DLD53_00390 PF14489 QueF-like protein DLD53_00390 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DLD53_00395 PF01061 ABC-2 type transporter DLD53_00400 PF00005 ABC transporter DLD53_00430 PF00464 Serine hydroxymethyltransferase DLD53_00435 PF02321 Outer membrane efflux protein DLD53_00440 PF00873 AcrB/AcrD/AcrF family DLD53_00445 PF13533 Biotin-lipoyl like DLD53_00450 PF03466 LysR substrate binding domain DLD53_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_00455 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLD53_00460 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_00465 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_00470 PF00005 ABC transporter DLD53_00475 PF00893 Small Multidrug Resistance protein DLD53_00480 PF00037 4Fe-4S binding domain DLD53_00490 PF00392 Bacterial regulatory proteins, gntR family DLD53_00490 PF00155 Aminotransferase class I and II DLD53_00495 PF02567 Phenazine biosynthesis-like protein DLD53_00500 PF00970 Oxidoreductase FAD-binding domain DLD53_00500 PF00175 Oxidoreductase NAD-binding domain DLD53_00505 PF01980 tRNA-methyltransferase O DLD53_00505 PF18389 TrmO C-terminal domain DLD53_00515 PF00437 Type II/IV secretion system protein DLD53_00525 PF00072 Response regulator receiver domain DLD53_00525 PF00486 Transcriptional regulatory protein, C terminal DLD53_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_00530 PF00512 His Kinase A (phospho-acceptor) domain DLD53_00530 PF08521 Two-component sensor kinase N-terminal DLD53_00540 PF00293 NUDIX domain DLD53_00550 PF00912 Transglycosylase DLD53_00550 PF14814 Bifunctional transglycosylase second domain DLD53_00550 PF00905 Penicillin binding protein transpeptidase domain DLD53_00555 PF01513 ATP-NAD kinase DLD53_00560 PF07023 Protein of unknown function (DUF1315) DLD53_00565 PF02885 Glycosyl transferase family, helical bundle domain DLD53_00565 PF00591 Glycosyl transferase family, a/b domain DLD53_00575 PF00375 Sodium:dicarboxylate symporter family DLD53_00580 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_00580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_00580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_00585 PF00756 Putative esterase DLD53_00590 PF01842 ACT domain DLD53_00590 PF01817 Chorismate mutase type II DLD53_00590 PF00800 Prephenate dehydratase DLD53_00595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DLD53_00605 PF07687 Peptidase dimerisation domain DLD53_00605 PF01546 Peptidase family M20/M25/M40 DLD53_00610 PF12706 Beta-lactamase superfamily domain DLD53_00620 PF03883 Peroxide stress protein YaaA DLD53_00630 PF05690 Thiazole biosynthesis protein ThiG DLD53_00640 PF04241 Protein of unknown function (DUF423) DLD53_00645 PF00140 Sigma-70 factor, region 1.2 DLD53_00645 PF04545 Sigma-70, region 4 DLD53_00645 PF04542 Sigma-70 region 2 DLD53_00655 PF00313 'Cold-shock' DNA-binding domain DLD53_00660 PF00270 DEAD/DEAH box helicase DLD53_00660 PF00271 Helicase conserved C-terminal domain DLD53_00670 PF00881 Nitroreductase family DLD53_00675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DLD53_00675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DLD53_00695 PF01180 Dihydroorotate dehydrogenase DLD53_00700 PF02674 Colicin V production protein DLD53_00705 PF00156 Phosphoribosyl transferase domain DLD53_00720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLD53_00720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLD53_00725 PF01435 Peptidase family M48 DLD53_00730 PF09424 Yqey-like protein DLD53_00735 PF01165 Ribosomal protein S21 DLD53_00740 PF00814 Glycoprotease family DLD53_00760 PF00069 Protein kinase domain DLD53_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_00785 PF03466 LysR substrate binding domain DLD53_00790 PF00202 Aminotransferase class-III DLD53_00795 PF00171 Aldehyde dehydrogenase family DLD53_00800 PF00324 Amino acid permease DLD53_00830 PF04076 Bacterial OB fold (BOF) protein DLD53_00865 PF00561 alpha/beta hydrolase fold DLD53_00870 PF03616 Sodium/glutamate symporter DLD53_00880 PF07729 FCD domain DLD53_00880 PF00392 Bacterial regulatory proteins, gntR family DLD53_00930 PF00083 Sugar (and other) transporter DLD53_00930 PF08946 Osmosensory transporter coiled coil DLD53_00955 PF00155 Aminotransferase class I and II DLD53_00960 PF02080 TrkA-C domain DLD53_00960 PF06826 Predicted Permease Membrane Region DLD53_00970 PF04403 Paraquat-inducible protein A DLD53_00975 PF02470 MlaD protein DLD53_00985 PF01177 Asp/Glu/Hydantoin racemase DLD53_00990 PF00892 EamA-like transporter family DLD53_00995 PF07995 Glucose / Sorbosone dehydrogenase DLD53_01015 PF00375 Sodium:dicarboxylate symporter family DLD53_01030 PF00753 Metallo-beta-lactamase superfamily DLD53_01030 PF16123 Hydroxyacylglutathione hydrolase C-terminus DLD53_01035 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_01040 PF09383 NIL domain DLD53_01040 PF00005 ABC transporter DLD53_01045 PF03180 NLPA lipoprotein DLD53_01050 PF02843 Phosphoribosylglycinamide synthetase, C domain DLD53_01050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DLD53_01050 PF02844 Phosphoribosylglycinamide synthetase, N domain DLD53_01055 PF01808 AICARFT/IMPCHase bienzyme DLD53_01055 PF02142 MGS-like domain DLD53_01060 PF02954 Bacterial regulatory protein, Fis family DLD53_01080 PF13932 GidA associated domain DLD53_01080 PF01134 Glucose inhibited division protein A DLD53_01090 PF14403 Circularly permuted ATP-grasp type 2 DLD53_01100 PF01841 Transglutaminase-like superfamily DLD53_01100 PF08379 Bacterial transglutaminase-like N-terminal region DLD53_01110 PF00842 Alanine racemase, C-terminal domain DLD53_01110 PF01168 Alanine racemase, N-terminal domain DLD53_01115 PF00772 DnaB-like helicase N terminal domain DLD53_01115 PF03796 DnaB-like helicase C terminal domain DLD53_01120 PF03948 Ribosomal protein L9, C-terminal domain DLD53_01120 PF01281 Ribosomal protein L9, N-terminal domain DLD53_01125 PF01084 Ribosomal protein S18 DLD53_01130 PF01250 Ribosomal protein S6 DLD53_01135 PF01040 UbiA prenyltransferase family DLD53_01140 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DLD53_01145 PF00510 Cytochrome c oxidase subunit III DLD53_01150 PF00115 Cytochrome C and Quinol oxidase polypeptide I DLD53_01155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DLD53_01155 PF06481 COX Aromatic Rich Motif DLD53_01165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DLD53_01165 PF02896 PEP-utilising enzyme, TIM barrel domain DLD53_01165 PF00391 PEP-utilising enzyme, mobile domain DLD53_01170 PF03618 Kinase/pyrophosphorylase DLD53_01180 PF14883 Hypothetical glycosyl hydrolase family 13 DLD53_01180 PF01522 Polysaccharide deacetylase DLD53_01195 PF00535 Glycosyl transferase family 2 DLD53_01200 PF13994 PgaD-like protein DLD53_01210 PF00296 Luciferase-like monooxygenase DLD53_01230 PF03466 LysR substrate binding domain DLD53_01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_01240 PF03462 PCRF domain DLD53_01240 PF00472 RF-1 domain DLD53_01245 PF13847 Methyltransferase domain DLD53_01245 PF17827 PrmC N-terminal domain DLD53_01250 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_01255 PF09084 NMT1/THI5 like DLD53_01260 PF12833 Helix-turn-helix domain DLD53_01265 PF00106 short chain dehydrogenase DLD53_01270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_01270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_01270 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_01275 PF13193 AMP-binding enzyme C-terminal domain DLD53_01275 PF00501 AMP-binding enzyme DLD53_01280 PF01613 Flavin reductase like domain DLD53_01285 PF00899 ThiF family DLD53_01290 PF03109 ABC1 family DLD53_01305 PF03814 Potassium-transporting ATPase A subunit DLD53_01315 PF02669 K+-transporting ATPase, c chain DLD53_01320 PF00512 His Kinase A (phospho-acceptor) domain DLD53_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_01320 PF13493 Domain of unknown function (DUF4118) DLD53_01320 PF02702 Osmosensitive K+ channel His kinase sensor domain DLD53_01325 PF00486 Transcriptional regulatory protein, C terminal DLD53_01325 PF00072 Response regulator receiver domain DLD53_01330 PF00120 Glutamine synthetase, catalytic domain DLD53_01340 PF03232 Ubiquinone biosynthesis protein COQ7 DLD53_01345 PF07690 Major Facilitator Superfamily DLD53_01350 PF01103 Surface antigen DLD53_01350 PF07244 Surface antigen variable number repeat DLD53_01350 PF17243 POTRA domain TamA domain 1 DLD53_01370 PF00330 Aconitase family (aconitate hydratase) DLD53_01370 PF11791 Aconitate B N-terminal domain DLD53_01370 PF06434 Aconitate hydratase 2 N-terminus DLD53_01380 PF00027 Cyclic nucleotide-binding domain DLD53_01380 PF00520 Ion transport protein DLD53_01385 PF07690 Major Facilitator Superfamily DLD53_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_01400 PF03466 LysR substrate binding domain DLD53_01405 PF04284 Protein of unknown function (DUF441) DLD53_01415 PF01479 S4 domain DLD53_01415 PF00849 RNA pseudouridylate synthase DLD53_01430 PF00849 RNA pseudouridylate synthase DLD53_01430 PF01479 S4 domain DLD53_01435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DLD53_01440 PF08676 MutL C terminal dimerisation domain DLD53_01440 PF01119 DNA mismatch repair protein, C-terminal domain DLD53_01450 PF17209 Hfq protein DLD53_01460 PF00881 Nitroreductase family DLD53_01470 PF00149 Calcineurin-like phosphoesterase DLD53_01475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DLD53_01480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DLD53_01480 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLD53_01485 PF00117 Glutamine amidotransferase class-I DLD53_01485 PF00958 GMP synthase C terminal domain DLD53_01485 PF02540 NAD synthase DLD53_01490 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DLD53_01495 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DLD53_01500 PF13520 Amino acid permease DLD53_01505 PF00171 Aldehyde dehydrogenase family DLD53_01520 PF00465 Iron-containing alcohol dehydrogenase DLD53_01525 PF05970 PIF1-like helicase DLD53_01525 PF14493 Helix-turn-helix domain DLD53_01535 PF06445 GyrI-like small molecule binding domain DLD53_01540 PF02110 Hydroxyethylthiazole kinase family DLD53_01555 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DLD53_01555 PF11940 Domain of unknown function (DUF3458) Ig-like fold DLD53_01555 PF01433 Peptidase family M1 domain DLD53_01565 PF00106 short chain dehydrogenase DLD53_01575 PF01817 Chorismate mutase type II DLD53_01580 PF01037 Lrp/AsnC ligand binding domain DLD53_01595 PF00440 Bacterial regulatory proteins, tetR family DLD53_01600 PF07715 TonB-dependent Receptor Plug Domain DLD53_01600 PF00593 TonB dependent receptor DLD53_01605 PF00924 Mechanosensitive ion channel DLD53_01635 PF07715 TonB-dependent Receptor Plug Domain DLD53_01635 PF00593 TonB dependent receptor DLD53_01655 PF12848 ABC transporter DLD53_01655 PF00005 ABC transporter DLD53_01660 PF00582 Universal stress protein family DLD53_01675 PF00689 Cation transporting ATPase, C-terminus DLD53_01675 PF00690 Cation transporter/ATPase, N-terminus DLD53_01680 PF02308 MgtC family DLD53_01685 PF03594 Benzoate membrane transport protein DLD53_01690 PF01037 Lrp/AsnC ligand binding domain DLD53_01695 PF01810 LysE type translocator DLD53_01705 PF03466 LysR substrate binding domain DLD53_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_01715 PF02803 Thiolase, C-terminal domain DLD53_01715 PF00108 Thiolase, N-terminal domain DLD53_01740 PF07690 Major Facilitator Superfamily DLD53_01745 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DLD53_01745 PF12169 DNA polymerase III subunits gamma and tau domain III DLD53_01745 PF12170 DNA polymerase III tau subunit V interacting with alpha DLD53_01755 PF03061 Thioesterase superfamily DLD53_01760 PF00465 Iron-containing alcohol dehydrogenase DLD53_01770 PF01451 Low molecular weight phosphotyrosine protein phosphatase DLD53_01775 PF01565 FAD binding domain DLD53_01775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DLD53_01790 PF01645 Conserved region in glutamate synthase DLD53_01865 PF02384 N-6 DNA Methylase DLD53_01865 PF12161 HsdM N-terminal domain DLD53_01910 PF01695 IstB-like ATP binding protein DLD53_02150 PF08019 Phosphoethanolamine transferase EptA/EptB DLD53_02150 PF00884 Sulfatase DLD53_02155 PF12832 MFS_1 like family DLD53_02165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLD53_02165 PF02785 Biotin carboxylase C-terminal domain DLD53_02165 PF00289 Biotin carboxylase, N-terminal domain DLD53_02170 PF00364 Biotin-requiring enzyme DLD53_02175 PF01220 Dehydroquinase class II DLD53_02180 PF11799 impB/mucB/samB family C-terminal domain DLD53_02180 PF13438 Domain of unknown function (DUF4113) DLD53_02180 PF00817 impB/mucB/samB family DLD53_02190 PF00005 ABC transporter DLD53_02195 PF00072 Response regulator receiver domain DLD53_02195 PF00486 Transcriptional regulatory protein, C terminal DLD53_02205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DLD53_02205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DLD53_02205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_02205 PF13806 Rieske-like [2Fe-2S] domain DLD53_02205 PF18267 Rubredoxin NAD+ reductase C-terminal domain DLD53_02205 PF04324 BFD-like [2Fe-2S] binding domain DLD53_02210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DLD53_02210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DLD53_02210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_02210 PF18267 Rubredoxin NAD+ reductase C-terminal domain DLD53_02210 PF04324 BFD-like [2Fe-2S] binding domain DLD53_02215 PF00384 Molybdopterin oxidoreductase DLD53_02215 PF04324 BFD-like [2Fe-2S] binding domain DLD53_02215 PF01568 Molydopterin dinucleotide binding domain DLD53_02215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLD53_02220 PF12804 MobA-like NTP transferase domain DLD53_02225 PF00384 Molybdopterin oxidoreductase DLD53_02225 PF01568 Molydopterin dinucleotide binding domain DLD53_02225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLD53_02230 PF06463 Molybdenum Cofactor Synthesis C DLD53_02230 PF04055 Radical SAM superfamily DLD53_02240 PF02391 MoaE protein DLD53_02245 PF00994 Probable molybdopterin binding domain DLD53_02245 PF01967 MoaC family DLD53_02250 PF00994 Probable molybdopterin binding domain DLD53_02250 PF03454 MoeA C-terminal region (domain IV) DLD53_02250 PF03453 MoeA N-terminal region (domain I and II) DLD53_02255 PF01638 HxlR-like helix-turn-helix DLD53_02260 PF00392 Bacterial regulatory proteins, gntR family DLD53_02260 PF00155 Aminotransferase class I and II DLD53_02265 PF00892 EamA-like transporter family DLD53_02285 PF02635 DsrE/DsrF-like family DLD53_02290 PF16363 GDP-mannose 4,6 dehydratase DLD53_02295 PF00206 Lyase DLD53_02295 PF10415 Fumarase C C-terminus DLD53_02325 PF01266 FAD dependent oxidoreductase DLD53_02335 PF02542 YgbB family DLD53_02345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DLD53_02345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DLD53_02350 PF00440 Bacterial regulatory proteins, tetR family DLD53_02355 PF02954 Bacterial regulatory protein, Fis family DLD53_02355 PF00072 Response regulator receiver domain DLD53_02355 PF00158 Sigma-54 interaction domain DLD53_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_02360 PF00989 PAS fold DLD53_02360 PF00512 His Kinase A (phospho-acceptor) domain DLD53_02365 PF00919 Uncharacterized protein family UPF0004 DLD53_02365 PF04055 Radical SAM superfamily DLD53_02365 PF18693 TRAM domain DLD53_02370 PF00696 Amino acid kinase family DLD53_02375 PF01765 Ribosome recycling factor DLD53_02380 PF01255 Putative undecaprenyl diphosphate synthase DLD53_02390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DLD53_02390 PF13288 DXP reductoisomerase C-terminal domain DLD53_02390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DLD53_02395 PF13180 PDZ domain DLD53_02395 PF17820 PDZ domain DLD53_02395 PF02163 Peptidase family M50 DLD53_02400 PF01103 Surface antigen DLD53_02400 PF07244 Surface antigen variable number repeat DLD53_02410 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_02410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DLD53_02415 PF07977 FabA-like domain DLD53_02420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DLD53_02420 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_02435 PF02631 RecX family DLD53_02440 PF00154 recA bacterial DNA recombination protein DLD53_02445 PF01479 S4 domain DLD53_02450 PF13419 Haloacid dehalogenase-like hydrolase DLD53_02475 PF01037 Lrp/AsnC ligand binding domain DLD53_02480 PF00266 Aminotransferase class-V DLD53_02485 PF00324 Amino acid permease DLD53_02495 PF13936 Helix-turn-helix domain DLD53_02495 PF00665 Integrase core domain DLD53_02500 PF00082 Subtilase family DLD53_02500 PF05922 Peptidase inhibitor I9 DLD53_02505 PF01740 STAS domain DLD53_02505 PF00916 Sulfate permease family DLD53_02510 PF02586 SOS response associated peptidase (SRAP) DLD53_02515 PF07995 Glucose / Sorbosone dehydrogenase DLD53_02525 PF00563 EAL domain DLD53_02525 PF00990 Diguanylate cyclase, GGDEF domain DLD53_02525 PF03707 Bacterial signalling protein N terminal repeat DLD53_02545 PF02378 Phosphotransferase system, EIIC DLD53_02545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DLD53_02550 PF00294 pfkB family carbohydrate kinase DLD53_02555 PF02896 PEP-utilising enzyme, TIM barrel domain DLD53_02555 PF00391 PEP-utilising enzyme, mobile domain DLD53_02555 PF05524 PEP-utilising enzyme, N-terminal DLD53_02555 PF00381 PTS HPr component phosphorylation site DLD53_02555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DLD53_02580 PF05525 Branched-chain amino acid transport protein DLD53_02585 PF00557 Metallopeptidase family M24 DLD53_02590 PF03466 LysR substrate binding domain DLD53_02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_02600 PF00462 Glutaredoxin DLD53_02605 PF00202 Aminotransferase class-III DLD53_02610 PF00571 CBS domain DLD53_02610 PF00478 IMP dehydrogenase / GMP reductase domain DLD53_02635 PF00448 SRP54-type protein, GTPase domain DLD53_02635 PF02881 SRP54-type protein, helical bundle domain DLD53_02645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DLD53_02660 PF08173 Membrane bound YbgT-like protein DLD53_02665 PF02322 Cytochrome bd terminal oxidase subunit II DLD53_02670 PF01654 Cytochrome bd terminal oxidase subunit I DLD53_02685 PF07290 Protein of unknown function (DUF1449) DLD53_02695 PF00294 pfkB family carbohydrate kinase DLD53_02700 PF07715 TonB-dependent Receptor Plug Domain DLD53_02700 PF00593 TonB dependent receptor DLD53_02705 PF00675 Insulinase (Peptidase family M16) DLD53_02705 PF08367 Peptidase M16C associated DLD53_02705 PF05193 Peptidase M16 inactive domain DLD53_02710 PF02253 Phospholipase A1 DLD53_02715 PF02386 Cation transport protein DLD53_02720 PF02254 TrkA-N domain DLD53_02720 PF02080 TrkA-C domain DLD53_02725 PF00585 C-terminal regulatory domain of Threonine dehydratase DLD53_02725 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_02730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DLD53_02745 PF01118 Semialdehyde dehydrogenase, NAD binding domain DLD53_02745 PF02774 Semialdehyde dehydrogenase, dimerisation domain DLD53_02755 PF02617 ATP-dependent Clp protease adaptor protein ClpS DLD53_02760 PF10431 C-terminal, D2-small domain, of ClpB protein DLD53_02760 PF17871 AAA lid domain DLD53_02760 PF07724 AAA domain (Cdc48 subfamily) DLD53_02760 PF02861 Clp amino terminal domain, pathogenicity island component DLD53_02760 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_02765 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DLD53_02770 PF00793 DAHP synthetase I family DLD53_02785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_02785 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_02815 PF00117 Glutamine amidotransferase class-I DLD53_02815 PF06418 CTP synthase N-terminus DLD53_02820 PF00793 DAHP synthetase I family DLD53_02825 PF00113 Enolase, C-terminal TIM barrel domain DLD53_02825 PF03952 Enolase, N-terminal domain DLD53_02830 PF04239 Protein of unknown function (DUF421) DLD53_02835 PF04977 Septum formation initiator DLD53_02840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DLD53_02845 PF01144 Coenzyme A transferase DLD53_02850 PF01144 Coenzyme A transferase DLD53_02855 PF02803 Thiolase, C-terminal domain DLD53_02855 PF00108 Thiolase, N-terminal domain DLD53_02860 PF10397 Adenylosuccinate lyase C-terminus DLD53_02860 PF00206 Lyase DLD53_02865 PF00561 alpha/beta hydrolase fold DLD53_02870 PF07690 Major Facilitator Superfamily DLD53_02875 PF02627 Carboxymuconolactone decarboxylase family DLD53_02880 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DLD53_02880 PF00775 Dioxygenase DLD53_02885 PF00775 Dioxygenase DLD53_02890 PF01487 Type I 3-dehydroquinase DLD53_02895 PF05048 Periplasmic copper-binding protein (NosD) DLD53_02900 PF04966 Carbohydrate-selective porin, OprB family DLD53_02905 PF13360 PQQ-like domain DLD53_02905 PF01011 PQQ enzyme repeat DLD53_02915 PF04143 Sulphur transport DLD53_02925 PF00753 Metallo-beta-lactamase superfamily DLD53_02930 PF09339 IclR helix-turn-helix domain DLD53_02930 PF01614 Bacterial transcriptional regulator DLD53_02935 PF03466 LysR substrate binding domain DLD53_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_02940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_02940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_02940 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_02955 PF00106 short chain dehydrogenase DLD53_02965 PF07690 Major Facilitator Superfamily DLD53_02975 PF01425 Amidase DLD53_02980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DLD53_02995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DLD53_02995 PF00355 Rieske [2Fe-2S] domain DLD53_03010 PF00175 Oxidoreductase NAD-binding domain DLD53_03010 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_03015 PF01613 Flavin reductase like domain DLD53_03020 PF02311 AraC-like ligand binding domain DLD53_03020 PF12833 Helix-turn-helix domain DLD53_03025 PF02727 Copper amine oxidase, N2 domain DLD53_03025 PF01179 Copper amine oxidase, enzyme domain DLD53_03025 PF02728 Copper amine oxidase, N3 domain DLD53_03025 PF07833 Copper amine oxidase N-terminal domain DLD53_03035 PF00171 Aldehyde dehydrogenase family DLD53_03040 PF01804 Penicillin amidase DLD53_03045 PF12146 Serine aminopeptidase, S33 DLD53_03050 PF02803 Thiolase, C-terminal domain DLD53_03050 PF00108 Thiolase, N-terminal domain DLD53_03055 PF01144 Coenzyme A transferase DLD53_03060 PF01144 Coenzyme A transferase DLD53_03065 PF04444 Catechol dioxygenase N terminus DLD53_03065 PF00775 Dioxygenase DLD53_03070 PF02426 Muconolactone delta-isomerase DLD53_03075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DLD53_03075 PF13378 Enolase C-terminal domain-like DLD53_03080 PF03466 LysR substrate binding domain DLD53_03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_03090 PF00392 Bacterial regulatory proteins, gntR family DLD53_03090 PF07729 FCD domain DLD53_03095 PF00920 Dehydratase family DLD53_03100 PF07690 Major Facilitator Superfamily DLD53_03110 PF00171 Aldehyde dehydrogenase family DLD53_03130 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_03130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_03130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_03140 PF00158 Sigma-54 interaction domain DLD53_03140 PF02954 Bacterial regulatory protein, Fis family DLD53_03140 PF06506 Propionate catabolism activator DLD53_03145 PF13193 AMP-binding enzyme C-terminal domain DLD53_03145 PF00501 AMP-binding enzyme DLD53_03150 PF04341 Protein of unknown function, DUF485 DLD53_03155 PF00474 Sodium:solute symporter family DLD53_03160 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_03160 PF00107 Zinc-binding dehydrogenase DLD53_03165 PF00171 Aldehyde dehydrogenase family DLD53_03175 PF00561 alpha/beta hydrolase fold DLD53_03180 PF00199 Catalase DLD53_03180 PF06628 Catalase-related immune-responsive DLD53_03200 PF07859 alpha/beta hydrolase fold DLD53_03205 PF01047 MarR family DLD53_03210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_03210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_03215 PF00106 short chain dehydrogenase DLD53_03220 PF01872 RibD C-terminal domain DLD53_03225 PF00376 MerR family regulatory protein DLD53_03225 PF09278 MerR, DNA binding DLD53_03235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_03245 PF12706 Beta-lactamase superfamily domain DLD53_03250 PF08359 YsiA-like protein, C-terminal region DLD53_03250 PF00440 Bacterial regulatory proteins, tetR family DLD53_03260 PF00857 Isochorismatase family DLD53_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_03265 PF03466 LysR substrate binding domain DLD53_03270 PF07995 Glucose / Sorbosone dehydrogenase DLD53_03275 PF00999 Sodium/hydrogen exchanger family DLD53_03275 PF02254 TrkA-N domain DLD53_03285 PF01546 Peptidase family M20/M25/M40 DLD53_03285 PF07687 Peptidase dimerisation domain DLD53_03300 PF08479 POTRA domain, ShlB-type DLD53_03300 PF17287 POTRA domain DLD53_03300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DLD53_03305 PF04829 Pre-toxin domain with VENN motif DLD53_03305 PF13018 Extended Signal Peptide of Type V secretion system DLD53_03305 PF13332 Hemagglutinin repeat DLD53_03305 PF05860 haemagglutination activity domain DLD53_03320 PF07690 Major Facilitator Superfamily DLD53_03325 PF04909 Amidohydrolase DLD53_03340 PF08450 SMP-30/Gluconolactonase/LRE-like region DLD53_03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_03350 PF03466 LysR substrate binding domain DLD53_03370 PF07690 Major Facilitator Superfamily DLD53_03375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLD53_03375 PF01842 ACT domain DLD53_03375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLD53_03380 PF03737 Aldolase/RraA DLD53_03405 PF13936 Helix-turn-helix domain DLD53_03405 PF00665 Integrase core domain DLD53_03425 PF00171 Aldehyde dehydrogenase family DLD53_03430 PF00920 Dehydratase family DLD53_03440 PF03466 LysR substrate binding domain DLD53_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_03445 PF01370 NAD dependent epimerase/dehydratase family DLD53_03450 PF07690 Major Facilitator Superfamily DLD53_03455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DLD53_03455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLD53_03460 PF12833 Helix-turn-helix domain DLD53_03460 PF06719 AraC-type transcriptional regulator N-terminus DLD53_03475 PF00107 Zinc-binding dehydrogenase DLD53_03475 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_03490 PF00005 ABC transporter DLD53_03510 PF14572 Phosphoribosyl synthetase-associated domain DLD53_03510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DLD53_03515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DLD53_03580 PF00665 Integrase core domain DLD53_03580 PF13936 Helix-turn-helix domain DLD53_03595 PF00196 Bacterial regulatory proteins, luxR family DLD53_03600 PF01425 Amidase DLD53_03605 PF13533 Biotin-lipoyl like DLD53_03610 PF07690 Major Facilitator Superfamily DLD53_03635 PF01975 Survival protein SurE DLD53_03645 PF02824 TGS domain DLD53_03645 PF04607 Region found in RelA / SpoT proteins DLD53_03645 PF13291 ACT domain DLD53_03700 PF12146 Serine aminopeptidase, S33 DLD53_03705 PF02311 AraC-like ligand binding domain DLD53_03705 PF12833 Helix-turn-helix domain DLD53_03715 PF00512 His Kinase A (phospho-acceptor) domain DLD53_03715 PF16527 Two-component sensor protein CpxA, periplasmic domain DLD53_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_03715 PF00672 HAMP domain DLD53_03720 PF00072 Response regulator receiver domain DLD53_03720 PF00486 Transcriptional regulatory protein, C terminal DLD53_03725 PF00529 HlyD membrane-fusion protein of T1SS DLD53_03725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_03730 PF00873 AcrB/AcrD/AcrF family DLD53_03735 PF02321 Outer membrane efflux protein DLD53_03740 PF12146 Serine aminopeptidase, S33 DLD53_03745 PF00743 Flavin-binding monooxygenase-like DLD53_03750 PF01593 Flavin containing amine oxidoreductase DLD53_03765 PF01266 FAD dependent oxidoreductase DLD53_03785 PF13953 PapC C-terminal domain DLD53_03785 PF13954 PapC N-terminal domain DLD53_03785 PF00577 Outer membrane usher protein DLD53_03790 PF00419 Fimbrial protein DLD53_03800 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_03800 PF00107 Zinc-binding dehydrogenase DLD53_03810 PF00199 Catalase DLD53_03825 PF13091 PLD-like domain DLD53_03845 PF01244 Membrane dipeptidase (Peptidase family M19) DLD53_03850 PF13186 Iron-sulfur cluster-binding domain DLD53_03850 PF04055 Radical SAM superfamily DLD53_03855 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DLD53_03860 PF03070 TENA/THI-4/PQQC family DLD53_03865 PF12706 Beta-lactamase superfamily domain DLD53_03870 PF08042 PqqA family DLD53_03875 PF13089 Polyphosphate kinase N-terminal domain DLD53_03875 PF17941 Polyphosphate kinase C-terminal domain 1 DLD53_03875 PF13090 Polyphosphate kinase C-terminal domain 2 DLD53_03875 PF02503 Polyphosphate kinase middle domain DLD53_03880 PF00149 Calcineurin-like phosphoesterase DLD53_03890 PF00550 Phosphopantetheine attachment site DLD53_03890 PF00857 Isochorismatase family DLD53_03895 PF00106 short chain dehydrogenase DLD53_03910 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_03920 PF03459 TOBE domain DLD53_03925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DLD53_03925 PF00355 Rieske [2Fe-2S] domain DLD53_03930 PF00866 Ring hydroxylating beta subunit DLD53_03935 PF00175 Oxidoreductase NAD-binding domain DLD53_03935 PF00970 Oxidoreductase FAD-binding domain DLD53_03935 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_03940 PF14525 AraC-binding-like domain DLD53_03940 PF12833 Helix-turn-helix domain DLD53_03950 PF01613 Flavin reductase like domain DLD53_03965 PF01738 Dienelactone hydrolase family DLD53_03970 PF07690 Major Facilitator Superfamily DLD53_03975 PF12833 Helix-turn-helix domain DLD53_03975 PF06719 AraC-type transcriptional regulator N-terminus DLD53_03995 PF03466 LysR substrate binding domain DLD53_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_04000 PF01144 Coenzyme A transferase DLD53_04005 PF01144 Coenzyme A transferase DLD53_04010 PF02667 Short chain fatty acid transporter DLD53_04015 PF02803 Thiolase, C-terminal domain DLD53_04015 PF00108 Thiolase, N-terminal domain DLD53_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_04020 PF03466 LysR substrate binding domain DLD53_04025 PF03466 LysR substrate binding domain DLD53_04025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_04040 PF00206 Lyase DLD53_04040 PF10415 Fumarase C C-terminus DLD53_04045 PF00593 TonB dependent receptor DLD53_04045 PF07715 TonB-dependent Receptor Plug Domain DLD53_04050 PF00083 Sugar (and other) transporter DLD53_04065 PF00005 ABC transporter DLD53_04070 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_04075 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DLD53_04100 PF02525 Flavodoxin-like fold DLD53_04105 PF01638 HxlR-like helix-turn-helix DLD53_04110 PF06445 GyrI-like small molecule binding domain DLD53_04110 PF12833 Helix-turn-helix domain DLD53_04125 PF01925 Sulfite exporter TauE/SafE DLD53_04130 PF00753 Metallo-beta-lactamase superfamily DLD53_04130 PF04273 Putative phosphatase (DUF442) DLD53_04135 PF04273 Putative phosphatase (DUF442) DLD53_04135 PF00753 Metallo-beta-lactamase superfamily DLD53_04140 PF00072 Response regulator receiver domain DLD53_04140 PF02954 Bacterial regulatory protein, Fis family DLD53_04140 PF00158 Sigma-54 interaction domain DLD53_04145 PF01062 Bestrophin, RFP-TM, chloride channel DLD53_04150 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_04150 PF00107 Zinc-binding dehydrogenase DLD53_04155 PF00106 short chain dehydrogenase DLD53_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_04160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLD53_04165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLD53_04165 PF00364 Biotin-requiring enzyme DLD53_04165 PF02817 e3 binding domain DLD53_04170 PF02779 Transketolase, pyrimidine binding domain DLD53_04170 PF02780 Transketolase, C-terminal domain DLD53_04175 PF00676 Dehydrogenase E1 component DLD53_04180 PF04055 Radical SAM superfamily DLD53_04195 PF08448 PAS fold DLD53_04195 PF00990 Diguanylate cyclase, GGDEF domain DLD53_04200 PF01264 Chorismate synthase DLD53_04205 PF05175 Methyltransferase small domain DLD53_04210 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_04220 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_04220 PF01434 Peptidase family M41 DLD53_04220 PF17862 AAA+ lid domain DLD53_04230 PF05166 YcgL domain DLD53_04250 PF00570 HRDC domain DLD53_04250 PF01612 3'-5' exonuclease DLD53_04255 PF13662 Toprim domain DLD53_04255 PF02132 RecR protein DLD53_04260 PF02575 YbaB/EbfC DNA-binding family DLD53_04270 PF01053 Cys/Met metabolism PLP-dependent enzyme DLD53_04275 PF00561 alpha/beta hydrolase fold DLD53_04280 PF08241 Methyltransferase domain DLD53_04310 PF01230 HIT domain DLD53_04345 PF00005 ABC transporter DLD53_04350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_04360 PF02684 Lipid-A-disaccharide synthetase DLD53_04365 PF00593 TonB dependent receptor DLD53_04365 PF07715 TonB-dependent Receptor Plug Domain DLD53_04385 PF01925 Sulfite exporter TauE/SafE DLD53_04390 PF00793 DAHP synthetase I family DLD53_04395 PF02654 Cobalamin-5-phosphate synthase DLD53_04410 PF02277 Phosphoribosyltransferase DLD53_04415 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DLD53_04455 PF00593 TonB dependent receptor DLD53_04455 PF07715 TonB-dependent Receptor Plug Domain DLD53_04470 PF04183 IucA / IucC family DLD53_04470 PF06276 Ferric iron reductase FhuF-like transporter DLD53_04475 PF06276 Ferric iron reductase FhuF-like transporter DLD53_04475 PF04183 IucA / IucC family DLD53_04480 PF07690 Major Facilitator Superfamily DLD53_04485 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DLD53_04490 PF04183 IucA / IucC family DLD53_04490 PF06276 Ferric iron reductase FhuF-like transporter DLD53_04495 PF04073 Aminoacyl-tRNA editing domain DLD53_04505 PF03109 ABC1 family DLD53_04510 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_04510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_04515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_04515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_04515 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_04520 PF00487 Fatty acid desaturase DLD53_04525 PF12833 Helix-turn-helix domain DLD53_04525 PF12852 Cupin DLD53_04530 PF00639 PPIC-type PPIASE domain DLD53_04530 PF09312 SurA N-terminal domain DLD53_04535 PF00216 Bacterial DNA-binding protein DLD53_04550 PF02082 Transcriptional regulator DLD53_04555 PF00266 Aminotransferase class-V DLD53_04560 PF01592 NifU-like N terminal domain DLD53_04565 PF01521 Iron-sulphur cluster biosynthesis DLD53_04570 PF07743 HSCB C-terminal oligomerisation domain DLD53_04570 PF00226 DnaJ domain DLD53_04575 PF00012 Hsp70 protein DLD53_04580 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_04585 PF00211 Adenylate and Guanylate cyclase catalytic domain DLD53_04595 PF03461 TRCF domain DLD53_04595 PF00271 Helicase conserved C-terminal domain DLD53_04595 PF00270 DEAD/DEAH box helicase DLD53_04595 PF02559 CarD-like/TRCF domain DLD53_04595 PF17757 UvrB interaction domain DLD53_04615 PF03737 Aldolase/RraA DLD53_04620 PF13460 NAD(P)H-binding DLD53_04625 PF01649 Ribosomal protein S20 DLD53_04635 PF00459 Inositol monophosphatase family DLD53_04650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLD53_04650 PF00005 ABC transporter DLD53_04655 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_04660 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_04665 PF01432 Peptidase family M3 DLD53_04685 PF00593 TonB dependent receptor DLD53_04685 PF07715 TonB-dependent Receptor Plug Domain DLD53_04695 PF01618 MotA/TolQ/ExbB proton channel family DLD53_04700 PF02472 Biopolymer transport protein ExbD/TolR DLD53_04705 PF02472 Biopolymer transport protein ExbD/TolR DLD53_04715 PF01274 Malate synthase DLD53_04720 PF03969 AFG1-like ATPase DLD53_04730 PF00743 Flavin-binding monooxygenase-like DLD53_04740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DLD53_04750 PF00216 Bacterial DNA-binding protein DLD53_04755 PF00575 S1 RNA binding domain DLD53_04760 PF02224 Cytidylate kinase DLD53_04770 PF14437 MafB19-like deaminase DLD53_04780 PF03167 Uracil DNA glycosylase superfamily DLD53_04790 PF03934 Type II secretion system (T2SS), protein K DLD53_04795 PF07963 Prokaryotic N-terminal methylation motif DLD53_04795 PF11612 Type II secretion system (T2SS), protein J DLD53_04800 PF07963 Prokaryotic N-terminal methylation motif DLD53_04800 PF02501 Type II secretion system (T2SS), protein I DLD53_04815 PF01026 TatD related DNase DLD53_04825 PF09115 DNA polymerase III, delta subunit, C terminal DLD53_04830 PF02348 Cytidylyltransferase DLD53_04835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DLD53_04840 PF00005 ABC transporter DLD53_04840 PF00664 ABC transporter transmembrane region DLD53_04850 PF01618 MotA/TolQ/ExbB proton channel family DLD53_04855 PF17762 HTH domain found in ParB protein DLD53_04855 PF02195 ParB-like nuclease domain DLD53_04860 PF13614 AAA domain DLD53_04865 PF02527 rRNA small subunit methyltransferase G DLD53_04870 PF00483 Nucleotidyl transferase DLD53_04875 PF01636 Phosphotransferase enzyme family DLD53_04880 PF04453 LPS transport system D DLD53_04880 PF03968 OstA-like protein DLD53_04885 PF00639 PPIC-type PPIASE domain DLD53_04885 PF09312 SurA N-terminal domain DLD53_04890 PF01116 Fructose-bisphosphate aldolase class-II DLD53_04900 PF00162 Phosphoglycerate kinase DLD53_04910 PF02545 Maf-like protein DLD53_04915 PF08007 Cupin superfamily protein DLD53_04930 PF00375 Sodium:dicarboxylate symporter family DLD53_04935 PF06912 Protein of unknown function (DUF1275) DLD53_04940 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DLD53_04945 PF00664 ABC transporter transmembrane region DLD53_04945 PF00005 ABC transporter DLD53_04955 PF12833 Helix-turn-helix domain DLD53_04955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DLD53_04960 PF01597 Glycine cleavage H-protein DLD53_04965 PF02146 Sir2 family DLD53_04970 PF00474 Sodium:solute symporter family DLD53_04975 PF01037 Lrp/AsnC ligand binding domain DLD53_04980 PF01619 Proline dehydrogenase DLD53_04980 PF00171 Aldehyde dehydrogenase family DLD53_04980 PF14850 DNA-binding domain of Proline dehydrogenase DLD53_04980 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DLD53_04985 PF04229 GrpB protein DLD53_04990 PF05958 tRNA (Uracil-5-)-methyltransferase DLD53_05000 PF09992 Phosphodiester glycosidase DLD53_05010 PF04264 YceI-like domain DLD53_05020 PF02780 Transketolase, C-terminal domain DLD53_05020 PF00456 Transketolase, thiamine diphosphate binding domain DLD53_05020 PF02779 Transketolase, pyrimidine binding domain DLD53_05025 PF02773 S-adenosylmethionine synthetase, C-terminal domain DLD53_05025 PF00438 S-adenosylmethionine synthetase, N-terminal domain DLD53_05025 PF02772 S-adenosylmethionine synthetase, central domain DLD53_05045 PF00905 Penicillin binding protein transpeptidase domain DLD53_05060 PF02075 Crossover junction endodeoxyribonuclease RuvC DLD53_05065 PF01256 Carbohydrate kinase DLD53_05065 PF03853 YjeF-related protein N-terminus DLD53_05070 PF08331 Domain of unknown function (DUF1730) DLD53_05075 PF06968 Biotin and Thiamin Synthesis associated domain DLD53_05075 PF04055 Radical SAM superfamily DLD53_05090 PF16970 Type-1 fimbrial protein, A DLD53_05095 PF02753 Pili assembly chaperone PapD, C-terminal domain DLD53_05095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DLD53_05100 PF13953 PapC C-terminal domain DLD53_05100 PF00577 Outer membrane usher protein DLD53_05100 PF13954 PapC N-terminal domain DLD53_05125 PF00892 EamA-like transporter family DLD53_05135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DLD53_05145 PF03466 LysR substrate binding domain DLD53_05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05165 PF00440 Bacterial regulatory proteins, tetR family DLD53_05175 PF01709 Transcriptional regulator DLD53_05180 PF01037 Lrp/AsnC ligand binding domain DLD53_05190 PF00005 ABC transporter DLD53_05195 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05200 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05225 PF00296 Luciferase-like monooxygenase DLD53_05230 PF03180 NLPA lipoprotein DLD53_05235 PF03180 NLPA lipoprotein DLD53_05240 PF09383 NIL domain DLD53_05240 PF00005 ABC transporter DLD53_05245 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05250 PF01926 50S ribosome-binding GTPase DLD53_05250 PF06071 Protein of unknown function (DUF933) DLD53_05275 PF03591 AzlC protein DLD53_05280 PF05437 Branched-chain amino acid transport protein (AzlD) DLD53_05290 PF02222 ATP-grasp domain DLD53_05295 PF08335 GlnD PII-uridylyltransferase DLD53_05295 PF01909 Nucleotidyltransferase domain DLD53_05295 PF01966 HD domain DLD53_05300 PF00155 Aminotransferase class I and II DLD53_05310 PF12833 Helix-turn-helix domain DLD53_05310 PF12852 Cupin DLD53_05315 PF00255 Glutathione peroxidase DLD53_05320 PF01641 SelR domain DLD53_05325 PF00155 Aminotransferase class I and II DLD53_05330 PF00375 Sodium:dicarboxylate symporter family DLD53_05335 PF17763 Glutaminase/Asparaginase C-terminal domain DLD53_05335 PF00710 Asparaginase, N-terminal DLD53_05340 PF07733 Bacterial DNA polymerase III alpha NTPase domain DLD53_05340 PF02811 PHP domain DLD53_05340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DLD53_05340 PF01336 OB-fold nucleic acid binding domain DLD53_05340 PF14579 Helix-hairpin-helix motif DLD53_05345 PF00588 SpoU rRNA Methylase family DLD53_05350 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_05365 PF13192 Thioredoxin domain DLD53_05365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_05380 PF03466 LysR substrate binding domain DLD53_05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05385 PF01758 Sodium Bile acid symporter family DLD53_05390 PF01022 Bacterial regulatory protein, arsR family DLD53_05395 PF03960 ArsC family DLD53_05405 PF13382 Adenine deaminase C-terminal domain DLD53_05405 PF01979 Amidohydrolase family DLD53_05415 PF03466 LysR substrate binding domain DLD53_05415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DLD53_05430 PF01177 Asp/Glu/Hydantoin racemase DLD53_05435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DLD53_05440 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05445 PF00005 ABC transporter DLD53_05450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DLD53_05460 PF00083 Sugar (and other) transporter DLD53_05465 PF00296 Luciferase-like monooxygenase DLD53_05470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_05470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DLD53_05470 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_05485 PF01654 Cytochrome bd terminal oxidase subunit I DLD53_05490 PF02322 Cytochrome bd terminal oxidase subunit II DLD53_05500 PF00155 Aminotransferase class I and II DLD53_05500 PF00392 Bacterial regulatory proteins, gntR family DLD53_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05505 PF03466 LysR substrate binding domain DLD53_05520 PF00698 Acyl transferase domain DLD53_05525 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DLD53_05535 PF01039 Carboxyl transferase domain DLD53_05540 PF06857 Malonate decarboxylase delta subunit (MdcD) DLD53_05545 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DLD53_05550 PF16957 Malonate decarboxylase, alpha subunit, transporter DLD53_05555 PF07690 Major Facilitator Superfamily DLD53_05570 PF00392 Bacterial regulatory proteins, gntR family DLD53_05570 PF00155 Aminotransferase class I and II DLD53_05575 PF04172 LrgB-like family DLD53_05580 PF03788 LrgA family DLD53_05585 PF03466 LysR substrate binding domain DLD53_05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05590 PF14834 Glutathione S-transferase, C-terminal domain DLD53_05590 PF02798 Glutathione S-transferase, N-terminal domain DLD53_05595 PF02798 Glutathione S-transferase, N-terminal domain DLD53_05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05600 PF03466 LysR substrate binding domain DLD53_05615 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_05625 PF00266 Aminotransferase class-V DLD53_05635 PF01810 LysE type translocator DLD53_05640 PF03466 LysR substrate binding domain DLD53_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05650 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLD53_05655 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLD53_05660 PF00005 ABC transporter DLD53_05665 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05670 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05685 PF00072 Response regulator receiver domain DLD53_05690 PF00072 Response regulator receiver domain DLD53_05690 PF00512 His Kinase A (phospho-acceptor) domain DLD53_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_05690 PF09308 LuxQ, periplasmic DLD53_05700 PF01037 Lrp/AsnC ligand binding domain DLD53_05700 PF13404 AsnC-type helix-turn-helix domain DLD53_05710 PF00717 Peptidase S24-like DLD53_05735 PF06628 Catalase-related immune-responsive DLD53_05735 PF00199 Catalase DLD53_05735 PF18011 C-terminal domain found in long catalases DLD53_05745 PF00994 Probable molybdopterin binding domain DLD53_05745 PF02464 Competence-damaged protein DLD53_05745 PF18146 Damage-inducible protein CinA KH domain DLD53_05775 PF03466 LysR substrate binding domain DLD53_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05795 PF13193 AMP-binding enzyme C-terminal domain DLD53_05795 PF00501 AMP-binding enzyme DLD53_05800 PF00440 Bacterial regulatory proteins, tetR family DLD53_05805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_05805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_05805 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_05810 PF01039 Carboxyl transferase domain DLD53_05815 PF00378 Enoyl-CoA hydratase/isomerase DLD53_05820 PF02785 Biotin carboxylase C-terminal domain DLD53_05820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLD53_05820 PF00364 Biotin-requiring enzyme DLD53_05820 PF00289 Biotin carboxylase, N-terminal domain DLD53_05825 PF00682 HMGL-like DLD53_05830 PF03466 LysR substrate binding domain DLD53_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_05845 PF12806 Acetyl-CoA dehydrogenase C-terminal like DLD53_05845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_05845 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_05855 PF07690 Major Facilitator Superfamily DLD53_05865 PF01144 Coenzyme A transferase DLD53_05870 PF01144 Coenzyme A transferase DLD53_05875 PF07690 Major Facilitator Superfamily DLD53_05880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_05880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_05880 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_05895 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DLD53_05895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLD53_05895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLD53_05900 PF02803 Thiolase, C-terminal domain DLD53_05900 PF00108 Thiolase, N-terminal domain DLD53_05905 PF09339 IclR helix-turn-helix domain DLD53_05910 PF07690 Major Facilitator Superfamily DLD53_05915 PF03060 Nitronate monooxygenase DLD53_05920 PF00378 Enoyl-CoA hydratase/isomerase DLD53_05925 PF09339 IclR helix-turn-helix domain DLD53_05930 PF02515 CoA-transferase family III DLD53_05935 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_05935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_05935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_05940 PF07690 Major Facilitator Superfamily DLD53_05945 PF13419 Haloacid dehalogenase-like hydrolase DLD53_05950 PF00266 Aminotransferase class-V DLD53_05955 PF01266 FAD dependent oxidoreductase DLD53_05960 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_05965 PF08402 TOBE domain DLD53_05965 PF00005 ABC transporter DLD53_05975 PF00392 Bacterial regulatory proteins, gntR family DLD53_05975 PF07702 UTRA domain DLD53_05980 PF01494 FAD binding domain DLD53_05985 PF09339 IclR helix-turn-helix domain DLD53_05985 PF01614 Bacterial transcriptional regulator DLD53_05990 PF02525 Flavodoxin-like fold DLD53_05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_05995 PF03466 LysR substrate binding domain DLD53_06000 PF02627 Carboxymuconolactone decarboxylase family DLD53_06005 PF00171 Aldehyde dehydrogenase family DLD53_06015 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DLD53_06025 PF00171 Aldehyde dehydrogenase family DLD53_06030 PF00296 Luciferase-like monooxygenase DLD53_06035 PF01613 Flavin reductase like domain DLD53_06040 PF12697 Alpha/beta hydrolase family DLD53_06060 PF01292 Prokaryotic cytochrome b561 DLD53_06065 PF00199 Catalase DLD53_06100 PF00665 Integrase core domain DLD53_06100 PF13936 Helix-turn-helix domain DLD53_06115 PF03061 Thioesterase superfamily DLD53_06120 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_06125 PF07848 PaaX-like protein DLD53_06125 PF08223 PaaX-like protein C-terminal domain DLD53_06130 PF00501 AMP-binding enzyme DLD53_06130 PF14535 AMP-binding enzyme C-terminal domain DLD53_06135 PF00108 Thiolase, N-terminal domain DLD53_06135 PF02803 Thiolase, C-terminal domain DLD53_06140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLD53_06140 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DLD53_06140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLD53_06145 PF00378 Enoyl-CoA hydratase/isomerase DLD53_06150 PF00378 Enoyl-CoA hydratase/isomerase DLD53_06155 PF00175 Oxidoreductase NAD-binding domain DLD53_06155 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_06155 PF00970 Oxidoreductase FAD-binding domain DLD53_06160 PF01883 Iron-sulfur cluster assembly protein DLD53_06165 PF05138 Phenylacetic acid catabolic protein DLD53_06170 PF06243 Phenylacetic acid degradation B DLD53_06175 PF05138 Phenylacetic acid catabolic protein DLD53_06180 PF01575 MaoC like domain DLD53_06180 PF00171 Aldehyde dehydrogenase family DLD53_06185 PF03315 Serine dehydratase beta chain DLD53_06185 PF03313 Serine dehydratase alpha chain DLD53_06190 PF13520 Amino acid permease DLD53_06195 PF00171 Aldehyde dehydrogenase family DLD53_06200 PF00083 Sugar (and other) transporter DLD53_06210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_06210 PF04324 BFD-like [2Fe-2S] binding domain DLD53_06220 PF01266 FAD dependent oxidoreductase DLD53_06225 PF05544 Proline racemase DLD53_06230 PF00392 Bacterial regulatory proteins, gntR family DLD53_06240 PF00701 Dihydrodipicolinate synthetase family DLD53_06260 PF09278 MerR, DNA binding DLD53_06260 PF00376 MerR family regulatory protein DLD53_06270 PF02677 Epoxyqueuosine reductase QueH DLD53_06275 PF00665 Integrase core domain DLD53_06275 PF13936 Helix-turn-helix domain DLD53_06290 PF07690 Major Facilitator Superfamily DLD53_06295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLD53_06305 PF03466 LysR substrate binding domain DLD53_06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_06335 PF10431 C-terminal, D2-small domain, of ClpB protein DLD53_06335 PF07724 AAA domain (Cdc48 subfamily) DLD53_06335 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_06335 PF17871 AAA lid domain DLD53_06345 PF01389 OmpA-like transmembrane domain DLD53_06345 PF00691 OmpA family DLD53_06370 PF02522 Aminoglycoside 3-N-acetyltransferase DLD53_06380 PF13610 DDE domain DLD53_06385 PF00403 Heavy-metal-associated domain DLD53_06390 PF03203 MerC mercury resistance protein DLD53_06395 PF00403 Heavy-metal-associated domain DLD53_06395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLD53_06395 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_06400 PF13411 MerR HTH family regulatory protein DLD53_06405 PF05052 MerE protein DLD53_06415 PF00563 EAL domain DLD53_06415 PF11809 Domain of unknown function (DUF3330) DLD53_06435 PF13610 DDE domain DLD53_06455 PF00809 Pterin binding enzyme DLD53_06460 PF00893 Small Multidrug Resistance protein DLD53_06480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLD53_06480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLD53_06500 PF07690 Major Facilitator Superfamily DLD53_06510 PF03279 Bacterial lipid A biosynthesis acyltransferase DLD53_06515 PF00990 Diguanylate cyclase, GGDEF domain DLD53_06515 PF03707 Bacterial signalling protein N terminal repeat DLD53_06515 PF00563 EAL domain DLD53_06520 PF00892 EamA-like transporter family DLD53_06525 PF01037 Lrp/AsnC ligand binding domain DLD53_06530 PF05190 MutS family domain IV DLD53_06530 PF05192 MutS domain III DLD53_06530 PF05188 MutS domain II DLD53_06530 PF00488 MutS domain V DLD53_06530 PF01624 MutS domain I DLD53_06540 PF00037 4Fe-4S binding domain DLD53_06540 PF11953 Domain of unknown function (DUF3470) DLD53_06550 PF01596 O-methyltransferase DLD53_06560 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_06565 PF01205 Uncharacterized protein family UPF0029 DLD53_06575 PF00664 ABC transporter transmembrane region DLD53_06575 PF00005 ABC transporter DLD53_06575 PF03412 Peptidase C39 family DLD53_06580 PF02321 Outer membrane efflux protein DLD53_06585 PF12399 Branched-chain amino acid ATP-binding cassette transporter DLD53_06585 PF00005 ABC transporter DLD53_06590 PF03968 OstA-like protein DLD53_06605 PF00571 CBS domain DLD53_06605 PF01380 SIS domain DLD53_06610 PF01406 tRNA synthetases class I (C) catalytic domain DLD53_06610 PF09190 DALR domain DLD53_06640 PF01638 HxlR-like helix-turn-helix DLD53_06645 PF07690 Major Facilitator Superfamily DLD53_06675 PF14748 Pyrroline-5-carboxylate reductase dimerisation DLD53_06675 PF03807 NADP oxidoreductase coenzyme F420-dependent DLD53_06685 PF00313 'Cold-shock' DNA-binding domain DLD53_06690 PF01810 LysE type translocator DLD53_06725 PF13742 OB-fold nucleic acid binding domain DLD53_06725 PF02601 Exonuclease VII, large subunit DLD53_06765 PF09278 MerR, DNA binding DLD53_06765 PF00376 MerR family regulatory protein DLD53_06770 PF00403 Heavy-metal-associated domain DLD53_06780 PF02954 Bacterial regulatory protein, Fis family DLD53_06780 PF06505 Activator of aromatic catabolism DLD53_06780 PF00158 Sigma-54 interaction domain DLD53_06780 PF02830 V4R domain DLD53_06790 PF06099 Phenol hydroxylase subunit DLD53_06795 PF02332 Methane/Phenol/Toluene Hydroxylase DLD53_06800 PF02406 MmoB/DmpM family DLD53_06805 PF02332 Methane/Phenol/Toluene Hydroxylase DLD53_06805 PF04945 YHS domain DLD53_06815 PF00970 Oxidoreductase FAD-binding domain DLD53_06815 PF00175 Oxidoreductase NAD-binding domain DLD53_06815 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_06825 PF03466 LysR substrate binding domain DLD53_06830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DLD53_06830 PF00355 Rieske [2Fe-2S] domain DLD53_06835 PF00866 Ring hydroxylating beta subunit DLD53_06840 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_06840 PF00175 Oxidoreductase NAD-binding domain DLD53_06840 PF00970 Oxidoreductase FAD-binding domain DLD53_06845 PF00106 short chain dehydrogenase DLD53_06850 PF03594 Benzoate membrane transport protein DLD53_06860 PF00753 Metallo-beta-lactamase superfamily DLD53_06860 PF14863 Alkyl sulfatase dimerisation DLD53_06860 PF14864 Alkyl sulfatase C-terminal DLD53_06865 PF07690 Major Facilitator Superfamily DLD53_06875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DLD53_06875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DLD53_06880 PF04408 Helicase associated domain (HA2) DLD53_06880 PF11898 Domain of unknown function (DUF3418) DLD53_06880 PF00271 Helicase conserved C-terminal domain DLD53_06880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DLD53_06880 PF00270 DEAD/DEAH box helicase DLD53_06885 PF10417 C-terminal domain of 1-Cys peroxiredoxin DLD53_06885 PF00578 AhpC/TSA family DLD53_06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_06905 PF13192 Thioredoxin domain DLD53_06915 PF02798 Glutathione S-transferase, N-terminal domain DLD53_06915 PF00043 Glutathione S-transferase, C-terminal domain DLD53_06925 PF02390 Putative methyltransferase DLD53_06930 PF00043 Glutathione S-transferase, C-terminal domain DLD53_06930 PF13417 Glutathione S-transferase, N-terminal domain DLD53_06940 PF00691 OmpA family DLD53_06940 PF13488 Glycine zipper DLD53_06945 PF01979 Amidohydrolase family DLD53_06950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DLD53_06950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DLD53_06960 PF02926 THUMP domain DLD53_06960 PF01170 Putative RNA methylase family UPF0020 DLD53_06960 PF10672 S-adenosylmethionine-dependent methyltransferase DLD53_06975 PF10431 C-terminal, D2-small domain, of ClpB protein DLD53_06975 PF02861 Clp amino terminal domain, pathogenicity island component DLD53_06975 PF17871 AAA lid domain DLD53_06975 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_06975 PF07724 AAA domain (Cdc48 subfamily) DLD53_06990 PF02566 OsmC-like protein DLD53_06995 PF00027 Cyclic nucleotide-binding domain DLD53_06995 PF13545 Crp-like helix-turn-helix domain DLD53_07000 PF00248 Aldo/keto reductase family DLD53_07010 PF13936 Helix-turn-helix domain DLD53_07010 PF00665 Integrase core domain DLD53_07020 PF00709 Adenylosuccinate synthetase DLD53_07025 PF13393 Histidyl-tRNA synthetase DLD53_07030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLD53_07030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DLD53_07035 PF02272 DHHA1 domain DLD53_07035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLD53_07035 PF01411 tRNA synthetases class II (A) DLD53_07040 PF13840 ACT domain DLD53_07040 PF01842 ACT domain DLD53_07040 PF00696 Amino acid kinase family DLD53_07045 PF02599 Global regulator protein family DLD53_07050 PF01351 Ribonuclease HII DLD53_07060 PF01292 Prokaryotic cytochrome b561 DLD53_07065 PF00962 Adenosine/AMP deaminase DLD53_07070 PF00860 Permease family DLD53_07080 PF00743 Flavin-binding monooxygenase-like DLD53_07085 PF00106 short chain dehydrogenase DLD53_07095 PF17954 Quercetinase C-terminal cupin domain DLD53_07095 PF02678 Pirin DLD53_07100 PF00440 Bacterial regulatory proteins, tetR family DLD53_07100 PF17932 Tetracyclin repressor-like, C-terminal domain DLD53_07115 PF13610 DDE domain DLD53_07125 PF00324 Amino acid permease DLD53_07130 PF04958 Arginine N-succinyltransferase beta subunit DLD53_07135 PF00202 Aminotransferase class-III DLD53_07145 PF00171 Aldehyde dehydrogenase family DLD53_07155 PF07729 FCD domain DLD53_07155 PF00392 Bacterial regulatory proteins, gntR family DLD53_07165 PF00324 Amino acid permease DLD53_07170 PF01266 FAD dependent oxidoreductase DLD53_07175 PF00324 Amino acid permease DLD53_07220 PF05593 RHS Repeat DLD53_07220 PF03527 RHS protein DLD53_07225 PF04717 Type VI secretion system, phage-baseplate injector DLD53_07225 PF16671 Actin cross-linking domain DLD53_07240 PF03180 NLPA lipoprotein DLD53_07250 PF13936 Helix-turn-helix domain DLD53_07250 PF00665 Integrase core domain DLD53_07270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_07270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_07275 PF00764 Arginosuccinate synthase DLD53_07280 PF01590 GAF domain DLD53_07280 PF00360 Phytochrome region DLD53_07280 PF00990 Diguanylate cyclase, GGDEF domain DLD53_07280 PF00563 EAL domain DLD53_07285 PF01979 Amidohydrolase family DLD53_07290 PF00929 Exonuclease DLD53_07300 PF00593 TonB dependent receptor DLD53_07300 PF07715 TonB-dependent Receptor Plug Domain DLD53_07305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_07305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_07310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLD53_07310 PF00005 ABC transporter DLD53_07315 PF12911 N-terminal TM domain of oligopeptide transport permease C DLD53_07315 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_07320 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_07325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLD53_07330 PF01464 Transglycosylase SLT domain DLD53_07330 PF01476 LysM domain DLD53_07330 PF01464 Transglycosylase SLT domain DLD53_07330 PF01476 LysM domain DLD53_07335 PF00929 Exonuclease DLD53_07345 PF09297 NADH pyrophosphatase zinc ribbon domain DLD53_07345 PF00293 NUDIX domain DLD53_07355 PF04972 BON domain DLD53_07360 PF02021 Uncharacterised protein family UPF0102 DLD53_07365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DLD53_07375 PF03466 LysR substrate binding domain DLD53_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_07380 PF01810 LysE type translocator DLD53_07390 PF13411 MerR HTH family regulatory protein DLD53_07400 PF01494 FAD binding domain DLD53_07405 PF01494 FAD binding domain DLD53_07410 PF00557 Metallopeptidase family M24 DLD53_07410 PF05195 Aminopeptidase P, N-terminal domain DLD53_07445 PF08019 Phosphoethanolamine transferase EptA/EptB DLD53_07445 PF00884 Sulfatase DLD53_07805 PF01812 5-formyltetrahydrofolate cyclo-ligase family DLD53_07815 PF05658 Head domain of trimeric autotransporter adhesin DLD53_07815 PF03895 YadA-like membrane anchor domain DLD53_07815 PF05662 Coiled stalk of trimeric autotransporter adhesin DLD53_07815 PF13018 Extended Signal Peptide of Type V secretion system DLD53_07820 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_07820 PF05362 Lon protease (S16) C-terminal proteolytic domain DLD53_07820 PF02190 ATP-dependent protease La (LON) substrate-binding domain DLD53_07825 PF02590 Predicted SPOUT methyltransferase DLD53_07830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DLD53_07840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DLD53_07840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DLD53_07845 PF04060 Putative Fe-S cluster DLD53_07850 PF00730 HhH-GPD superfamily base excision DNA repair protein DLD53_07850 PF00633 Helix-hairpin-helix motif DLD53_07850 PF10576 Iron-sulfur binding domain of endonuclease III DLD53_07860 PF05191 Adenylate kinase, active site lid DLD53_07875 PF03717 Penicillin-binding Protein dimerisation domain DLD53_07875 PF00905 Penicillin binding protein transpeptidase domain DLD53_07890 PF02492 CobW/HypB/UreG, nucleotide-binding domain DLD53_07895 PF01730 UreF DLD53_07900 PF05194 UreE urease accessory protein, C-terminal domain DLD53_07900 PF02814 UreE urease accessory protein, N-terminal domain DLD53_07905 PF00449 Urease alpha-subunit, N-terminal domain DLD53_07905 PF01979 Amidohydrolase family DLD53_07910 PF00699 Urease beta subunit DLD53_07915 PF00547 Urease, gamma subunit DLD53_07920 PF01774 UreD urease accessory protein DLD53_07935 PF00463 Isocitrate lyase family DLD53_07940 PF03466 LysR substrate binding domain DLD53_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_07945 PF00571 CBS domain DLD53_07945 PF01595 Cyclin M transmembrane N-terminal domain DLD53_07945 PF03471 Transporter associated domain DLD53_07955 PF03600 Citrate transporter DLD53_07970 PF00009 Elongation factor Tu GTP binding domain DLD53_07975 PF01507 Phosphoadenosine phosphosulfate reductase family DLD53_07985 PF14052 Capsule assembly protein Wzi DLD53_07990 PF01336 OB-fold nucleic acid binding domain DLD53_07990 PF00152 tRNA synthetases class II (D, K and N) DLD53_08010 PF00301 Rubredoxin DLD53_08015 PF18113 Rubredoxin binding C-terminal domain DLD53_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_08020 PF00561 alpha/beta hydrolase fold DLD53_08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_08025 PF03466 LysR substrate binding domain DLD53_08035 PF02503 Polyphosphate kinase middle domain DLD53_08035 PF17941 Polyphosphate kinase C-terminal domain 1 DLD53_08035 PF13090 Polyphosphate kinase C-terminal domain 2 DLD53_08035 PF13089 Polyphosphate kinase N-terminal domain DLD53_08040 PF00912 Transglycosylase DLD53_08045 PF01694 Rhomboid family DLD53_08055 PF00005 ABC transporter DLD53_08060 PF13472 GDSL-like Lipase/Acylhydrolase family DLD53_08065 PF00484 Carbonic anhydrase DLD53_08070 PF00561 alpha/beta hydrolase fold DLD53_08080 PF00593 TonB dependent receptor DLD53_08080 PF07715 TonB-dependent Receptor Plug Domain DLD53_08085 PF01521 Iron-sulphur cluster biosynthesis DLD53_08085 PF01106 NifU-like domain DLD53_08095 PF00884 Sulfatase DLD53_08100 PF03781 Sulfatase-modifying factor enzyme 1 DLD53_08115 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_08120 PF01384 Phosphate transporter family DLD53_08125 PF02574 Homocysteine S-methyltransferase DLD53_08125 PF00809 Pterin binding enzyme DLD53_08125 PF02607 B12 binding domain DLD53_08125 PF02310 B12 binding domain DLD53_08125 PF02965 Vitamin B12 dependent methionine synthase, activation domain DLD53_08130 PF02779 Transketolase, pyrimidine binding domain DLD53_08130 PF02780 Transketolase, C-terminal domain DLD53_08135 PF00456 Transketolase, thiamine diphosphate binding domain DLD53_08140 PF07690 Major Facilitator Superfamily DLD53_08150 PF03466 LysR substrate binding domain DLD53_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_08165 PF01263 Aldose 1-epimerase DLD53_08170 PF07690 Major Facilitator Superfamily DLD53_08175 PF12833 Helix-turn-helix domain DLD53_08175 PF02311 AraC-like ligand binding domain DLD53_08180 PF04960 Glutaminase DLD53_08185 PF01327 Polypeptide deformylase DLD53_08190 PF07690 Major Facilitator Superfamily DLD53_08200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLD53_08200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLD53_08200 PF00205 Thiamine pyrophosphate enzyme, central domain DLD53_08205 PF00171 Aldehyde dehydrogenase family DLD53_08210 PF01958 Domain of unknown function DUF108 DLD53_08210 PF03447 Homoserine dehydrogenase, NAD binding domain DLD53_08220 PF12697 Alpha/beta hydrolase family DLD53_08230 PF07690 Major Facilitator Superfamily DLD53_08235 PF14759 Reductase C-terminal DLD53_08235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_08240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DLD53_08250 PF00355 Rieske [2Fe-2S] domain DLD53_08260 PF00355 Rieske [2Fe-2S] domain DLD53_08265 PF01614 Bacterial transcriptional regulator DLD53_08265 PF09339 IclR helix-turn-helix domain DLD53_08280 PF00378 Enoyl-CoA hydratase/isomerase DLD53_08290 PF00535 Glycosyl transferase family 2 DLD53_08295 PF14883 Hypothetical glycosyl hydrolase family 13 DLD53_08295 PF01522 Polysaccharide deacetylase DLD53_08300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_08305 PF07152 YaeQ protein DLD53_08310 PF00375 Sodium:dicarboxylate symporter family DLD53_08315 PF02492 CobW/HypB/UreG, nucleotide-binding domain DLD53_08315 PF07683 Cobalamin synthesis protein cobW C-terminal domain DLD53_08325 PF03061 Thioesterase superfamily DLD53_08335 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_08340 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_08345 PF13977 BetI-type transcriptional repressor, C-terminal DLD53_08345 PF00440 Bacterial regulatory proteins, tetR family DLD53_08350 PF00171 Aldehyde dehydrogenase family DLD53_08355 PF00732 GMC oxidoreductase DLD53_08355 PF05199 GMC oxidoreductase DLD53_08360 PF06039 Malate:quinone oxidoreductase (Mqo) DLD53_08370 PF02574 Homocysteine S-methyltransferase DLD53_08375 PF13520 Amino acid permease DLD53_08400 PF00701 Dihydrodipicolinate synthetase family DLD53_08405 PF00083 Sugar (and other) transporter DLD53_08475 PF07690 Major Facilitator Superfamily DLD53_08480 PF13533 Biotin-lipoyl like DLD53_08485 PF03061 Thioesterase superfamily DLD53_08490 PF00490 Delta-aminolevulinic acid dehydratase DLD53_08495 PF01266 FAD dependent oxidoreductase DLD53_08500 PF01370 NAD dependent epimerase/dehydratase family DLD53_08500 PF08338 Domain of unknown function (DUF1731) DLD53_08520 PF00149 Calcineurin-like phosphoesterase DLD53_08520 PF12320 Type 5 capsule protein repressor C-terminal domain DLD53_08530 PF01168 Alanine racemase, N-terminal domain DLD53_08535 PF00437 Type II/IV secretion system protein DLD53_08540 PF00437 Type II/IV secretion system protein DLD53_08545 PF01475 Ferric uptake regulator family DLD53_08550 PF04355 SmpA / OmlA family DLD53_08555 PF03658 RnfH family Ubiquitin DLD53_08570 PF01814 Hemerythrin HHE cation binding domain DLD53_08575 PF13230 Glutamine amidotransferases class-II DLD53_08585 PF00696 Amino acid kinase family DLD53_08590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLD53_08590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLD53_08590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLD53_08590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLD53_08595 PF00692 dUTPase DLD53_08600 PF00580 UvrD/REP helicase N-terminal domain DLD53_08600 PF13361 UvrD-like helicase C-terminal domain DLD53_08605 PF00691 OmpA family DLD53_08605 PF13488 Glycine zipper DLD53_08610 PF01553 Acyltransferase DLD53_08620 PF03775 Septum formation inhibitor MinC, C-terminal domain DLD53_08625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DLD53_08630 PF03776 Septum formation topological specificity factor MinE DLD53_08645 PF01810 LysE type translocator DLD53_08650 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DLD53_08650 PF17854 FtsK alpha domain DLD53_08650 PF09397 Ftsk gamma domain DLD53_08650 PF01580 FtsK/SpoIIIE family DLD53_08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_08660 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DLD53_08665 PF04377 Arginine-tRNA-protein transferase, C terminus DLD53_08665 PF04376 Arginine-tRNA-protein transferase, N terminus DLD53_08670 PF00583 Acetyltransferase (GNAT) family DLD53_08685 PF00009 Elongation factor Tu GTP binding domain DLD53_08685 PF03144 Elongation factor Tu domain 2 DLD53_08685 PF03143 Elongation factor Tu C-terminal domain DLD53_08690 PF03144 Elongation factor Tu domain 2 DLD53_08690 PF00679 Elongation factor G C-terminus DLD53_08690 PF14492 Elongation Factor G, domain II DLD53_08690 PF03764 Elongation factor G, domain IV DLD53_08690 PF00009 Elongation factor Tu GTP binding domain DLD53_08695 PF00177 Ribosomal protein S7p/S5e DLD53_08700 PF00164 Ribosomal protein S12/S23 DLD53_08710 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_08710 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_08720 PF05726 Pirin C-terminal cupin domain DLD53_08720 PF02678 Pirin DLD53_08730 PF02540 NAD synthase DLD53_08730 PF00795 Carbon-nitrogen hydrolase DLD53_08745 PF00175 Oxidoreductase NAD-binding domain DLD53_08745 PF00970 Oxidoreductase FAD-binding domain DLD53_08745 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_08750 PF00171 Aldehyde dehydrogenase family DLD53_08755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DLD53_08755 PF00355 Rieske [2Fe-2S] domain DLD53_08760 PF07859 alpha/beta hydrolase fold DLD53_08765 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_08770 PF00180 Isocitrate/isopropylmalate dehydrogenase DLD53_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_08775 PF03466 LysR substrate binding domain DLD53_08795 PF00037 4Fe-4S binding domain DLD53_08800 PF01467 Cytidylyltransferase-like DLD53_08805 PF01668 SmpB protein DLD53_08810 PF03358 NADPH-dependent FMN reductase DLD53_08820 PF00849 RNA pseudouridylate synthase DLD53_08820 PF01479 S4 domain DLD53_08825 PF13525 Outer membrane lipoprotein DLD53_08830 PF10410 DnaB-helicase binding domain of primase DLD53_08830 PF08278 DNA primase DnaG DnaB-binding DLD53_08830 PF08275 DNA primase catalytic core, N-terminal domain DLD53_08830 PF01807 CHC2 zinc finger DLD53_08835 PF01488 Shikimate / quinate 5-dehydrogenase DLD53_08835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DLD53_08835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DLD53_08845 PF03550 Outer membrane lipoprotein LolB DLD53_08850 PF08544 GHMP kinases C terminal DLD53_08850 PF00288 GHMP kinases N terminal domain DLD53_08875 PF14572 Phosphoribosyl synthetase-associated domain DLD53_08875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DLD53_08880 PF01386 Ribosomal L25p family DLD53_08885 PF01195 Peptidyl-tRNA hydrolase DLD53_08890 PF02261 Aspartate decarboxylase DLD53_08905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DLD53_08915 PF08543 Phosphomethylpyrimidine kinase DLD53_08915 PF03070 TENA/THI-4/PQQC family DLD53_08915 PF02581 Thiamine monophosphate synthase DLD53_08920 PF01476 LysM domain DLD53_08920 PF04972 BON domain DLD53_08925 PF00550 Phosphopantetheine attachment site DLD53_08935 PF00698 Acyl transferase domain DLD53_08940 PF01783 Ribosomal L32p protein family DLD53_08945 PF02620 Large ribosomal RNA subunit accumulation protein YceD DLD53_08950 PF04315 Elongation factor P hydroxylase DLD53_08955 PF01300 Telomere recombination DLD53_08960 PF02616 Segregation and condensation protein ScpA DLD53_08965 PF04079 Segregation and condensation complex subunit ScpB DLD53_08970 PF00849 RNA pseudouridylate synthase DLD53_08970 PF01479 S4 domain DLD53_08985 PF00155 Aminotransferase class I and II DLD53_08990 PF06968 Biotin and Thiamin Synthesis associated domain DLD53_08990 PF00202 Aminotransferase class-III DLD53_08990 PF04055 Radical SAM superfamily DLD53_08995 PF08241 Methyltransferase domain DLD53_08995 PF12697 Alpha/beta hydrolase family DLD53_09000 PF02358 Trehalose-phosphatase DLD53_09005 PF00982 Glycosyltransferase family 20 DLD53_09010 PF07690 Major Facilitator Superfamily DLD53_09015 PF00210 Ferritin-like domain DLD53_09020 PF00533 BRCA1 C Terminus (BRCT) domain DLD53_09020 PF03120 NAD-dependent DNA ligase OB-fold domain DLD53_09020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DLD53_09020 PF12826 Helix-hairpin-helix motif DLD53_09020 PF01653 NAD-dependent DNA ligase adenylation domain DLD53_09030 PF06470 SMC proteins Flexible Hinge Domain DLD53_09030 PF02463 RecF/RecN/SMC N terminal domain DLD53_09040 PF01925 Sulfite exporter TauE/SafE DLD53_09050 PF03309 Type III pantothenate kinase DLD53_09055 PF02881 SRP54-type protein, helical bundle domain DLD53_09055 PF00448 SRP54-type protein, GTPase domain DLD53_09055 PF02978 Signal peptide binding domain DLD53_09065 PF01207 Dihydrouridine synthase (Dus) DLD53_09100 PF00692 dUTPase DLD53_09115 PF01048 Phosphorylase superfamily DLD53_09125 PF10609 NUBPL iron-transfer P-loop NTPase DLD53_09135 PF01588 Putative tRNA binding domain DLD53_09135 PF09334 tRNA synthetases class I (M) DLD53_09160 PF13533 Biotin-lipoyl like DLD53_09165 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_09180 PF05552 Conserved TM helix DLD53_09195 PF00175 Oxidoreductase NAD-binding domain DLD53_09195 PF00970 Oxidoreductase FAD-binding domain DLD53_09200 PF03466 LysR substrate binding domain DLD53_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_09205 PF00313 'Cold-shock' DNA-binding domain DLD53_09215 PF00361 Proton-conducting membrane transporter DLD53_09220 PF00361 Proton-conducting membrane transporter DLD53_09225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DLD53_09225 PF00361 Proton-conducting membrane transporter DLD53_09230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DLD53_09235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DLD53_09240 PF12838 4Fe-4S dicluster domain DLD53_09245 PF00146 NADH dehydrogenase DLD53_09250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DLD53_09250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLD53_09250 PF00384 Molybdopterin oxidoreductase DLD53_09255 PF10531 SLBB domain DLD53_09255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DLD53_09255 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DLD53_09265 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DLD53_09265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DLD53_09270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DLD53_09275 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DLD53_09280 PF17151 Periplasmic sensor domain DLD53_09280 PF00990 Diguanylate cyclase, GGDEF domain DLD53_09290 PF00672 HAMP domain DLD53_09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_09290 PF00512 His Kinase A (phospho-acceptor) domain DLD53_09295 PF00486 Transcriptional regulatory protein, C terminal DLD53_09295 PF00072 Response regulator receiver domain DLD53_09305 PF03477 ATP cone domain DLD53_09305 PF00317 Ribonucleotide reductase, all-alpha domain DLD53_09305 PF02867 Ribonucleotide reductase, barrel domain DLD53_09315 PF00268 Ribonucleotide reductase, small chain DLD53_09330 PF00665 Integrase core domain DLD53_09330 PF13936 Helix-turn-helix domain DLD53_09405 PF13936 Helix-turn-helix domain DLD53_09405 PF00665 Integrase core domain DLD53_09420 PF13360 PQQ-like domain DLD53_09420 PF01011 PQQ enzyme repeat DLD53_09440 PF02567 Phenazine biosynthesis-like protein DLD53_09460 PF00665 Integrase core domain DLD53_09460 PF13936 Helix-turn-helix domain DLD53_09480 PF01613 Flavin reductase like domain DLD53_09485 PF08267 Cobalamin-independent synthase, N-terminal domain DLD53_09485 PF01717 Cobalamin-independent synthase, Catalytic domain DLD53_09495 PF03466 LysR substrate binding domain DLD53_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_09500 PF01810 LysE type translocator DLD53_09510 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DLD53_09510 PF12833 Helix-turn-helix domain DLD53_09515 PF01546 Peptidase family M20/M25/M40 DLD53_09515 PF07687 Peptidase dimerisation domain DLD53_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_09525 PF03466 LysR substrate binding domain DLD53_09535 PF07690 Major Facilitator Superfamily DLD53_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_09545 PF03466 LysR substrate binding domain DLD53_09550 PF00890 FAD binding domain DLD53_09550 PF14537 Cytochrome c3 DLD53_09560 PF02515 CoA-transferase family III DLD53_09565 PF07690 Major Facilitator Superfamily DLD53_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_09575 PF03466 LysR substrate binding domain DLD53_09580 PF00107 Zinc-binding dehydrogenase DLD53_09580 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_09585 PF00962 Adenosine/AMP deaminase DLD53_09610 PF02445 Quinolinate synthetase A protein DLD53_09615 PF01960 ArgJ family DLD53_09620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DLD53_09620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DLD53_09625 PF00893 Small Multidrug Resistance protein DLD53_09635 PF05275 Copper resistance protein B precursor (CopB) DLD53_09640 PF07732 Multicopper oxidase DLD53_09640 PF07731 Multicopper oxidase DLD53_09640 PF00394 Multicopper oxidase DLD53_09655 PF00834 Ribulose-phosphate 3 epimerase family DLD53_09665 PF00756 Putative esterase DLD53_09675 PF04445 Putative SAM-dependent methyltransferase DLD53_09680 PF00814 Glycoprotease family DLD53_09685 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_09690 PF00293 NUDIX domain DLD53_09730 PF00425 chorismate binding enzyme DLD53_09730 PF04715 Anthranilate synthase component I, N terminal region DLD53_09735 PF00155 Aminotransferase class I and II DLD53_09740 PF00815 Histidinol dehydrogenase DLD53_09745 PF01634 ATP phosphoribosyltransferase DLD53_09750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DLD53_09755 PF01722 BolA-like protein DLD53_09760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DLD53_09765 PF00309 Sigma-54 factor, Activator interacting domain (AID) DLD53_09765 PF04552 Sigma-54, DNA binding domain DLD53_09765 PF04963 Sigma-54 factor, core binding domain DLD53_09810 PF00795 Carbon-nitrogen hydrolase DLD53_09820 PF01047 MarR family DLD53_09825 PF02566 OsmC-like protein DLD53_09830 PF00437 Type II/IV secretion system protein DLD53_09850 PF00476 DNA polymerase family A DLD53_09850 PF01612 3'-5' exonuclease DLD53_09850 PF01367 5'-3' exonuclease, C-terminal SAM fold DLD53_09850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DLD53_09855 PF02325 YGGT family DLD53_09860 PF14748 Pyrroline-5-carboxylate reductase dimerisation DLD53_09860 PF03807 NADP oxidoreductase coenzyme F420-dependent DLD53_09865 PF09179 TilS substrate binding domain DLD53_09865 PF01171 PP-loop family DLD53_09865 PF11734 TilS substrate C-terminal domain DLD53_09870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DLD53_09875 PF02541 Ppx/GppA phosphatase family DLD53_09880 PF00085 Thioredoxin DLD53_09885 PF07498 Rho termination factor, N-terminal domain DLD53_09885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLD53_09885 PF07497 Rho termination factor, RNA-binding domain DLD53_09900 PF00216 Bacterial DNA-binding protein DLD53_09905 PF01588 Putative tRNA binding domain DLD53_09905 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DLD53_09905 PF03483 B3/4 domain DLD53_09905 PF03147 Ferredoxin-fold anticodon binding domain DLD53_09905 PF03484 tRNA synthetase B5 domain DLD53_09910 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DLD53_09910 PF01409 tRNA synthetases class II core domain (F) DLD53_09930 PF00453 Ribosomal protein L20 DLD53_09935 PF01632 Ribosomal protein L35 DLD53_09940 PF07690 Major Facilitator Superfamily DLD53_09945 PF09335 SNARE associated Golgi protein DLD53_09950 PF02798 Glutathione S-transferase, N-terminal domain DLD53_09950 PF00043 Glutathione S-transferase, C-terminal domain DLD53_09960 PF05198 Translation initiation factor IF-3, N-terminal domain DLD53_09960 PF00707 Translation initiation factor IF-3, C-terminal domain DLD53_09965 PF03129 Anticodon binding domain DLD53_09965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLD53_09965 PF02824 TGS domain DLD53_09965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLD53_09970 PF13193 AMP-binding enzyme C-terminal domain DLD53_09970 PF00501 AMP-binding enzyme DLD53_09975 PF04751 Protein of unknown function (DUF615) DLD53_09980 PF00381 PTS HPr component phosphorylation site DLD53_09985 PF03668 P-loop ATPase protein family DLD53_09990 PF02569 Pantoate-beta-alanine ligase DLD53_09995 PF02548 Ketopantoate hydroxymethyltransferase DLD53_10000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DLD53_10005 PF12627 Probable RNA and SrmB- binding site of polymerase A DLD53_10005 PF12626 Polymerase A arginine-rich C-terminus DLD53_10005 PF01743 Poly A polymerase head domain DLD53_10015 PF03819 MazG nucleotide pyrophosphohydrolase domain DLD53_10025 PF02824 TGS domain DLD53_10025 PF13291 ACT domain DLD53_10025 PF04607 Region found in RelA / SpoT proteins DLD53_10030 PF05958 tRNA (Uracil-5-)-methyltransferase DLD53_10040 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_10045 PF01627 Hpt domain DLD53_10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_10045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DLD53_10045 PF00672 HAMP domain DLD53_10045 PF00512 His Kinase A (phospho-acceptor) domain DLD53_10045 PF00072 Response regulator receiver domain DLD53_10050 PF00378 Enoyl-CoA hydratase/isomerase DLD53_10055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLD53_10055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DLD53_10060 PF01261 Xylose isomerase-like TIM barrel DLD53_10070 PF00106 short chain dehydrogenase DLD53_10075 PF02233 NAD(P) transhydrogenase beta subunit DLD53_10080 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DLD53_10085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DLD53_10085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DLD53_10090 PF00892 EamA-like transporter family DLD53_10100 PF07690 Major Facilitator Superfamily DLD53_10105 PF01207 Dihydrouridine synthase (Dus) DLD53_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_10115 PF03466 LysR substrate binding domain DLD53_10125 PF00899 ThiF family DLD53_10135 PF00694 Aconitase C-terminal domain DLD53_10135 PF00330 Aconitase family (aconitate hydratase) DLD53_10140 PF01026 TatD related DNase DLD53_10155 PF16658 Class II release factor RF3, C-terminal domain DLD53_10155 PF03144 Elongation factor Tu domain 2 DLD53_10155 PF00009 Elongation factor Tu GTP binding domain DLD53_10185 PF03707 Bacterial signalling protein N terminal repeat DLD53_10185 PF00563 EAL domain DLD53_10185 PF00990 Diguanylate cyclase, GGDEF domain DLD53_10190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DLD53_10190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DLD53_10195 PF10369 Small subunit of acetolactate synthase DLD53_10200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLD53_10200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLD53_10200 PF00205 Thiamine pyrophosphate enzyme, central domain DLD53_10210 PF09334 tRNA synthetases class I (M) DLD53_10210 PF08264 Anticodon-binding domain of tRNA DLD53_10210 PF00133 tRNA synthetases class I (I, L, M and V) DLD53_10210 PF13603 Leucyl-tRNA synthetase, Domain 2 DLD53_10225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_10230 PF00005 ABC transporter DLD53_10230 PF02687 FtsX-like permease family DLD53_10230 PF12704 MacB-like periplasmic core domain DLD53_10235 PF02321 Outer membrane efflux protein DLD53_10250 PF00929 Exonuclease DLD53_10255 PF03193 RsgA GTPase DLD53_10265 PF00462 Glutaredoxin DLD53_10270 PF02556 Preprotein translocase subunit SecB DLD53_10285 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_10285 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_10300 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_10300 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_10310 PF04820 Tryptophan halogenase DLD53_10330 PF00221 Aromatic amino acid lyase DLD53_10345 PF13193 AMP-binding enzyme C-terminal domain DLD53_10345 PF00501 AMP-binding enzyme DLD53_10355 PF00550 Phosphopantetheine attachment site DLD53_10360 PF00550 Phosphopantetheine attachment site DLD53_10375 PF01926 50S ribosome-binding GTPase DLD53_10375 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DLD53_10380 PF13360 PQQ-like domain DLD53_10390 PF13393 Histidyl-tRNA synthetase DLD53_10390 PF03129 Anticodon binding domain DLD53_10395 PF04551 GcpE protein DLD53_10400 PF13464 Domain of unknown function (DUF4115) DLD53_10410 PF04055 Radical SAM superfamily DLD53_10415 PF00334 Nucleoside diphosphate kinase DLD53_10420 PF04384 Iron-sulphur cluster assembly DLD53_10425 PF01569 PAP2 superfamily DLD53_10430 PF13439 Glycosyltransferase Family 4 DLD53_10430 PF00534 Glycosyl transferases group 1 DLD53_10435 PF00595 PDZ domain DLD53_10435 PF03572 Peptidase family S41 DLD53_10435 PF17804 Tail specific protease N-terminal domain DLD53_10435 PF11818 C-terminal domain of tail specific protease (DUF3340) DLD53_10440 PF00933 Glycosyl hydrolase family 3 N terminal domain DLD53_10450 PF00561 alpha/beta hydrolase fold DLD53_10455 PF00171 Aldehyde dehydrogenase family DLD53_10460 PF00171 Aldehyde dehydrogenase family DLD53_10465 PF01202 Shikimate kinase DLD53_10470 PF02447 GntP family permease DLD53_10475 PF01081 KDPG and KHG aldolase DLD53_10480 PF00920 Dehydratase family DLD53_10485 PF00871 Acetokinase family DLD53_10490 PF01515 Phosphate acetyl/butaryl transferase DLD53_10490 PF07085 DRTGG domain DLD53_10495 PF05683 Fumarase C-terminus DLD53_10495 PF05681 Fumarate hydratase (Fumerase) DLD53_10510 PF07724 AAA domain (Cdc48 subfamily) DLD53_10510 PF06689 ClpX C4-type zinc finger DLD53_10510 PF10431 C-terminal, D2-small domain, of ClpB protein DLD53_10515 PF00574 Clp protease DLD53_10520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_10520 PF05697 Bacterial trigger factor protein (TF) DLD53_10520 PF05698 Bacterial trigger factor protein (TF) C-terminus DLD53_10525 PF00593 TonB dependent receptor DLD53_10525 PF07715 TonB-dependent Receptor Plug Domain DLD53_10530 PF13640 2OG-Fe(II) oxygenase superfamily DLD53_10530 PF18331 PKHD-type hydroxylase C-terminal domain DLD53_10535 PF08502 LeuA allosteric (dimerisation) domain DLD53_10535 PF00682 HMGL-like DLD53_10540 PF00561 alpha/beta hydrolase fold DLD53_10545 PF00561 alpha/beta hydrolase fold DLD53_10545 PF07021 Methionine biosynthesis protein MetW DLD53_10555 PF01725 Ham1 family DLD53_10565 PF02416 mttA/Hcf106 family DLD53_10570 PF02416 mttA/Hcf106 family DLD53_10575 PF00902 Sec-independent protein translocase protein (TatC) DLD53_10595 PF01790 Prolipoprotein diacylglyceryl transferase DLD53_10610 PF00303 Thymidylate synthase DLD53_10615 PF00186 Dihydrofolate reductase DLD53_10625 PF01625 Peptide methionine sulfoxide reductase DLD53_10635 PF01618 MotA/TolQ/ExbB proton channel family DLD53_10645 PF00551 Formyl transferase DLD53_10645 PF01842 ACT domain DLD53_10655 PF00171 Aldehyde dehydrogenase family DLD53_10660 PF00830 Ribosomal L28 family DLD53_10665 PF00471 Ribosomal protein L33 DLD53_10670 PF00999 Sodium/hydrogen exchanger family DLD53_10670 PF02254 TrkA-N domain DLD53_10690 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DLD53_10695 PF00580 UvrD/REP helicase N-terminal domain DLD53_10695 PF13361 UvrD-like helicase C-terminal domain DLD53_10710 PF01751 Toprim domain DLD53_10710 PF01131 DNA topoisomerase DLD53_10710 PF01396 Topoisomerase DNA binding C4 zinc finger DLD53_10710 PF08272 Topoisomerase I zinc-ribbon-like DLD53_10720 PF01638 HxlR-like helix-turn-helix DLD53_10725 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_10725 PF00107 Zinc-binding dehydrogenase DLD53_10740 PF01810 LysE type translocator DLD53_10745 PF03279 Bacterial lipid A biosynthesis acyltransferase DLD53_10755 PF00375 Sodium:dicarboxylate symporter family DLD53_10765 PF02774 Semialdehyde dehydrogenase, dimerisation domain DLD53_10765 PF01118 Semialdehyde dehydrogenase, NAD binding domain DLD53_10785 PF01416 tRNA pseudouridine synthase DLD53_10795 PF01176 Translation initiation factor 1A / IF-1 DLD53_10810 PF00180 Isocitrate/isopropylmalate dehydrogenase DLD53_10820 PF00694 Aconitase C-terminal domain DLD53_10825 PF00330 Aconitase family (aconitate hydratase) DLD53_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_10835 PF03466 LysR substrate binding domain DLD53_10855 PF00293 NUDIX domain DLD53_10860 PF02896 PEP-utilising enzyme, TIM barrel domain DLD53_10860 PF00391 PEP-utilising enzyme, mobile domain DLD53_10860 PF05524 PEP-utilising enzyme, N-terminal DLD53_10860 PF01590 GAF domain DLD53_10865 PF00141 Peroxidase DLD53_10870 PF12706 Beta-lactamase superfamily domain DLD53_10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_10875 PF03466 LysR substrate binding domain DLD53_10885 PF02798 Glutathione S-transferase, N-terminal domain DLD53_10890 PF13280 WYL domain DLD53_10890 PF08279 HTH domain DLD53_10895 PF13419 Haloacid dehalogenase-like hydrolase DLD53_10900 PF01479 S4 domain DLD53_10900 PF00849 RNA pseudouridylate synthase DLD53_10910 PF00575 S1 RNA binding domain DLD53_10910 PF10150 Ribonuclease E/G family DLD53_10910 PF12111 Polyribonucleotide phosphorylase C terminal DLD53_10915 PF13193 AMP-binding enzyme C-terminal domain DLD53_10915 PF00501 AMP-binding enzyme DLD53_10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_10930 PF03466 LysR substrate binding domain DLD53_10935 PF00106 short chain dehydrogenase DLD53_10940 PF06969 HemN C-terminal domain DLD53_10940 PF04055 Radical SAM superfamily DLD53_10950 PF01554 MatE DLD53_10955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_10955 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_10955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DLD53_10960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_10960 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DLD53_10965 PF03109 ABC1 family DLD53_10970 PF01197 Ribosomal protein L31 DLD53_10985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DLD53_11005 PF03884 DNA gyrase inhibitor YacG DLD53_11010 PF00753 Metallo-beta-lactamase superfamily DLD53_11015 PF00762 Ferrochelatase DLD53_11025 PF01177 Asp/Glu/Hydantoin racemase DLD53_11040 PF01206 Sulfurtransferase TusA DLD53_11045 PF00571 CBS domain DLD53_11045 PF03471 Transporter associated domain DLD53_11050 PF00795 Carbon-nitrogen hydrolase DLD53_11055 PF01588 Putative tRNA binding domain DLD53_11065 PF08334 Type II secretion system (T2SS), protein G DLD53_11065 PF07963 Prokaryotic N-terminal methylation motif DLD53_11070 PF00482 Type II secretion system (T2SS), protein F DLD53_11075 PF18074 Primosomal protein N C-terminal domain DLD53_11075 PF17764 3′ DNA-binding domain (3′BD) DLD53_11075 PF00271 Helicase conserved C-terminal domain DLD53_11075 PF00270 DEAD/DEAH box helicase DLD53_11075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DLD53_11080 PF00999 Sodium/hydrogen exchanger family DLD53_11080 PF02254 TrkA-N domain DLD53_11085 PF01430 Hsp33 protein DLD53_11095 PF01556 DnaJ C terminal domain DLD53_11095 PF00226 DnaJ domain DLD53_11105 PF01544 CorA-like Mg2+ transporter protein DLD53_11110 PF00575 S1 RNA binding domain DLD53_11110 PF03725 3' exoribonuclease family, domain 2 DLD53_11110 PF01138 3' exoribonuclease family, domain 1 DLD53_11110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DLD53_11110 PF00013 KH domain DLD53_11115 PF00312 Ribosomal protein S15 DLD53_11125 PF13538 UvrD-like helicase C-terminal domain DLD53_11130 PF12705 PD-(D/E)XK nuclease superfamily DLD53_11130 PF00580 UvrD/REP helicase N-terminal domain DLD53_11130 PF13361 UvrD-like helicase C-terminal domain DLD53_11135 PF17946 RecC C-terminal domain DLD53_11145 PF03976 Polyphosphate kinase 2 (PPK2) DLD53_11155 PF01209 ubiE/COQ5 methyltransferase family DLD53_11165 PF03109 ABC1 family DLD53_11170 PF01494 FAD binding domain DLD53_11175 PF01502 Phosphoribosyl-AMP cyclohydrolase DLD53_11190 PF13244 Domain of unknown function (DUF4040) DLD53_11190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DLD53_11190 PF00361 Proton-conducting membrane transporter DLD53_11190 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DLD53_11195 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DLD53_11200 PF00361 Proton-conducting membrane transporter DLD53_11210 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DLD53_11220 PF02033 Ribosome-binding factor A DLD53_11225 PF08364 Bacterial translation initiation factor IF-2 associated region DLD53_11225 PF04760 Translation initiation factor IF-2, N-terminal region DLD53_11225 PF11987 Translation-initiation factor 2 DLD53_11225 PF00009 Elongation factor Tu GTP binding domain DLD53_11230 PF00575 S1 RNA binding domain DLD53_11230 PF13184 NusA-like KH domain DLD53_11230 PF08529 NusA N-terminal domain DLD53_11235 PF02576 RimP N-terminal domain DLD53_11235 PF17384 RimP C-terminal SH3 domain DLD53_11255 PF03840 Preprotein translocase SecG subunit DLD53_11260 PF00121 Triosephosphate isomerase DLD53_11265 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DLD53_11265 PF00437 Type II/IV secretion system protein DLD53_11270 PF00482 Type II secretion system (T2SS), protein F DLD53_11275 PF06750 Bacterial Peptidase A24 N-terminal domain DLD53_11275 PF01478 Type IV leader peptidase family DLD53_11280 PF01121 Dephospho-CoA kinase DLD53_11290 PF00588 SpoU rRNA Methylase family DLD53_11290 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLD53_11295 PF06865 Pyrimidine/purine nucleoside phosphorylase DLD53_11305 PF02463 RecF/RecN/SMC N terminal domain DLD53_11310 PF02622 Uncharacterized ACR, COG1678 DLD53_11315 PF03652 Holliday junction resolvase DLD53_11320 PF13533 Biotin-lipoyl like DLD53_11345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DLD53_11345 PF02805 Metal binding domain of Ada DLD53_11345 PF12833 Helix-turn-helix domain DLD53_11345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DLD53_11350 PF01066 CDP-alcohol phosphatidyltransferase DLD53_11360 PF08459 UvrC Helix-hairpin-helix N-terminal DLD53_11360 PF02151 UvrB/uvrC motif DLD53_11360 PF01541 GIY-YIG catalytic domain DLD53_11375 PF13936 Helix-turn-helix domain DLD53_11375 PF00665 Integrase core domain DLD53_11385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLD53_11385 PF00378 Enoyl-CoA hydratase/isomerase DLD53_11385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLD53_11390 PF02803 Thiolase, C-terminal domain DLD53_11390 PF00108 Thiolase, N-terminal domain DLD53_11410 PF09278 MerR, DNA binding DLD53_11410 PF00376 MerR family regulatory protein DLD53_11420 PF01323 DSBA-like thioredoxin domain DLD53_11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_11435 PF00183 Hsp90 protein DLD53_11450 PF03553 Na+/H+ antiporter family DLD53_11450 PF13726 Na+-H+ antiporter family DLD53_11455 PF00561 alpha/beta hydrolase fold DLD53_11475 PF04998 RNA polymerase Rpb1, domain 5 DLD53_11475 PF04997 RNA polymerase Rpb1, domain 1 DLD53_11475 PF00623 RNA polymerase Rpb1, domain 2 DLD53_11475 PF04983 RNA polymerase Rpb1, domain 3 DLD53_11475 PF05000 RNA polymerase Rpb1, domain 4 DLD53_11480 PF04563 RNA polymerase beta subunit DLD53_11480 PF04561 RNA polymerase Rpb2, domain 2 DLD53_11480 PF04565 RNA polymerase Rpb2, domain 3 DLD53_11480 PF00562 RNA polymerase Rpb2, domain 6 DLD53_11480 PF10385 RNA polymerase beta subunit external 1 domain DLD53_11480 PF04560 RNA polymerase Rpb2, domain 7 DLD53_11485 PF16320 Ribosomal protein L7/L12 dimerisation domain DLD53_11485 PF00542 Ribosomal protein L7/L12 C-terminal domain DLD53_11490 PF00466 Ribosomal protein L10 DLD53_11495 PF00687 Ribosomal protein L1p/L10e family DLD53_11500 PF03946 Ribosomal protein L11, N-terminal domain DLD53_11500 PF00298 Ribosomal protein L11, RNA binding domain DLD53_11505 PF02357 Transcription termination factor nusG DLD53_11505 PF00467 KOW motif DLD53_11510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DLD53_11520 PF03144 Elongation factor Tu domain 2 DLD53_11520 PF03143 Elongation factor Tu C-terminal domain DLD53_11520 PF00009 Elongation factor Tu GTP binding domain DLD53_11545 PF04715 Anthranilate synthase component I, N terminal region DLD53_11545 PF00425 chorismate binding enzyme DLD53_11550 PF13419 Haloacid dehalogenase-like hydrolase DLD53_11555 PF00498 FHA domain DLD53_11555 PF12401 Protein of unknown function (DUF2662) DLD53_11560 PF03958 Bacterial type II/III secretion system short domain DLD53_11560 PF00263 Bacterial type II and III secretion system protein DLD53_11575 PF00816 H-NS histone family DLD53_11600 PF03900 Porphobilinogen deaminase, C-terminal domain DLD53_11600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DLD53_11605 PF00072 Response regulator receiver domain DLD53_11605 PF04397 LytTr DNA-binding domain DLD53_11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_11610 PF07694 5TMR of 5TMR-LYT DLD53_11610 PF06580 Histidine kinase DLD53_11615 PF14698 Argininosuccinate lyase C-terminal DLD53_11615 PF00206 Lyase DLD53_11620 PF04362 Bacterial Fe(2+) trafficking DLD53_11625 PF01895 PhoU domain DLD53_11630 PF02321 Outer membrane efflux protein DLD53_11635 PF00892 EamA-like transporter family DLD53_11650 PF01964 Radical SAM ThiC family DLD53_11650 PF13667 ThiC-associated domain DLD53_11655 PF00293 NUDIX domain DLD53_11660 PF00149 Calcineurin-like phosphoesterase DLD53_11665 PF01258 Prokaryotic dksA/traR C4-type zinc finger DLD53_11670 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLD53_11675 PF01098 Cell cycle protein DLD53_11680 PF08245 Mur ligase middle domain DLD53_11680 PF02875 Mur ligase family, glutamate ligase domain DLD53_11690 PF02421 Ferrous iron transport protein B DLD53_11690 PF07670 Nucleoside recognition DLD53_11690 PF07664 Ferrous iron transport protein B C terminus DLD53_11700 PF02899 Phage integrase, N-terminal SAM-like domain DLD53_11700 PF00589 Phage integrase family DLD53_11705 PF13098 Thioredoxin-like domain DLD53_11705 PF10411 Disulfide bond isomerase protein N-terminus DLD53_11710 PF03447 Homoserine dehydrogenase, NAD binding domain DLD53_11710 PF01842 ACT domain DLD53_11710 PF00742 Homoserine dehydrogenase DLD53_11715 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_11720 PF00768 D-alanyl-D-alanine carboxypeptidase DLD53_11725 PF00072 Response regulator receiver domain DLD53_11725 PF00196 Bacterial regulatory proteins, luxR family DLD53_11730 PF00512 His Kinase A (phospho-acceptor) domain DLD53_11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_11735 PF00072 Response regulator receiver domain DLD53_11735 PF02954 Bacterial regulatory protein, Fis family DLD53_11735 PF00158 Sigma-54 interaction domain DLD53_11740 PF00595 PDZ domain DLD53_11740 PF03572 Peptidase family S41 DLD53_11745 PF01676 Metalloenzyme superfamily DLD53_11745 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DLD53_11750 PF03739 Lipopolysaccharide export system permease LptF/LptG DLD53_11760 PF00883 Cytosol aminopeptidase family, catalytic domain DLD53_11760 PF02789 Cytosol aminopeptidase family, N-terminal domain DLD53_11780 PF00677 Lumazine binding domain DLD53_11790 PF01872 RibD C-terminal domain DLD53_11790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLD53_11795 PF03477 ATP cone domain DLD53_11800 PF00909 Ammonium Transporter Family DLD53_11805 PF00543 Nitrogen regulatory protein P-II DLD53_11815 PF13335 Magnesium chelatase, subunit ChlI C-terminal DLD53_11815 PF01078 Magnesium chelatase, subunit ChlI DLD53_11825 PF01636 Phosphotransferase enzyme family DLD53_11830 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DLD53_11855 PF02909 Tetracyclin repressor-like, C-terminal domain DLD53_11855 PF00440 Bacterial regulatory proteins, tetR family DLD53_11860 PF07690 Major Facilitator Superfamily DLD53_11870 PF01740 STAS domain DLD53_11870 PF00916 Sulfate permease family DLD53_11875 PF00582 Universal stress protein family DLD53_11895 PF00665 Integrase core domain DLD53_11905 PF01078 Magnesium chelatase, subunit ChlI DLD53_11905 PF13335 Magnesium chelatase, subunit ChlI C-terminal DLD53_11910 PF00392 Bacterial regulatory proteins, gntR family DLD53_11910 PF00155 Aminotransferase class I and II DLD53_11920 PF00701 Dihydrodipicolinate synthetase family DLD53_11930 PF03573 outer membrane porin, OprD family DLD53_11935 PF00719 Inorganic pyrophosphatase DLD53_11950 PF00501 AMP-binding enzyme DLD53_11950 PF13193 AMP-binding enzyme C-terminal domain DLD53_11955 PF03989 DNA gyrase C-terminal domain, beta-propeller DLD53_11955 PF00521 DNA gyrase/topoisomerase IV, subunit A DLD53_11960 PF07690 Major Facilitator Superfamily DLD53_11965 PF03458 UPF0126 domain DLD53_11970 PF02810 SEC-C motif DLD53_11975 PF03471 Transporter associated domain DLD53_11975 PF03741 Integral membrane protein TerC family DLD53_11980 PF03641 Possible lysine decarboxylase DLD53_11985 PF07690 Major Facilitator Superfamily DLD53_11995 PF00817 impB/mucB/samB family DLD53_11995 PF11799 impB/mucB/samB family C-terminal domain DLD53_11995 PF11798 IMS family HHH motif DLD53_12010 PF08497 Radical SAM N-terminal DLD53_12010 PF11842 Domain of unknown function (DUF3362) DLD53_12010 PF04055 Radical SAM superfamily DLD53_12030 PF03358 NADPH-dependent FMN reductase DLD53_12040 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_12075 PF00440 Bacterial regulatory proteins, tetR family DLD53_12100 PF01327 Polypeptide deformylase DLD53_12110 PF17782 DprA winged helix domain DLD53_12110 PF02481 DNA recombination-mediator protein A DLD53_12115 PF01300 Telomere recombination DLD53_12120 PF00892 EamA-like transporter family DLD53_12125 PF00440 Bacterial regulatory proteins, tetR family DLD53_12130 PF07690 Major Facilitator Superfamily DLD53_12140 PF00255 Glutathione peroxidase DLD53_12150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DLD53_12155 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLD53_12155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLD53_12160 PF00231 ATP synthase DLD53_12165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLD53_12165 PF00306 ATP synthase alpha/beta chain, C terminal domain DLD53_12165 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLD53_12170 PF00213 ATP synthase delta (OSCP) subunit DLD53_12175 PF00430 ATP synthase B/B' CF(0) DLD53_12180 PF00137 ATP synthase subunit C DLD53_12185 PF00119 ATP synthase A chain DLD53_12205 PF00005 ABC transporter DLD53_12210 PF00950 ABC 3 transport family DLD53_12215 PF01810 LysE type translocator DLD53_12220 PF04261 Dyp-type peroxidase family DLD53_12230 PF03949 Malic enzyme, NAD binding domain DLD53_12230 PF00390 Malic enzyme, N-terminal domain DLD53_12235 PF03485 Arginyl tRNA synthetase N terminal domain DLD53_12235 PF00750 tRNA synthetases class I (R) DLD53_12235 PF05746 DALR anticodon binding domain DLD53_12255 PF05726 Pirin C-terminal cupin domain DLD53_12255 PF02678 Pirin DLD53_12265 PF03551 Transcriptional regulator PadR-like family DLD53_12270 PF01909 Nucleotidyltransferase domain DLD53_12270 PF13427 Domain of unknown function (DUF4111) DLD53_12275 PF00958 GMP synthase C terminal domain DLD53_12275 PF00117 Glutamine amidotransferase class-I DLD53_12275 PF02540 NAD synthase DLD53_12280 PF04286 Protein of unknown function (DUF445) DLD53_12285 PF07681 DoxX DLD53_12290 PF09335 SNARE associated Golgi protein DLD53_12305 PF13614 AAA domain DLD53_12315 PF01722 BolA-like protein DLD53_12330 PF01648 4'-phosphopantetheinyl transferase superfamily DLD53_12335 PF12697 Alpha/beta hydrolase family DLD53_12350 PF00550 Phosphopantetheine attachment site DLD53_12350 PF00975 Thioesterase domain DLD53_12350 PF00668 Condensation domain DLD53_12350 PF00501 AMP-binding enzyme DLD53_12350 PF13193 AMP-binding enzyme C-terminal domain DLD53_12355 PF14765 Polyketide synthase dehydratase DLD53_12355 PF00975 Thioesterase domain DLD53_12355 PF08242 Methyltransferase domain DLD53_12355 PF16197 Ketoacyl-synthetase C-terminal extension DLD53_12355 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_12355 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_12355 PF00550 Phosphopantetheine attachment site DLD53_12360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_12360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_12360 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_12365 PF00501 AMP-binding enzyme DLD53_12370 PF00196 Bacterial regulatory proteins, luxR family DLD53_12370 PF03472 Autoinducer binding domain DLD53_12380 PF00765 Autoinducer synthase DLD53_12385 PF00083 Sugar (and other) transporter DLD53_12385 PF07690 Major Facilitator Superfamily DLD53_12390 PF00378 Enoyl-CoA hydratase/isomerase DLD53_12395 PF00378 Enoyl-CoA hydratase/isomerase DLD53_12400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_12400 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_12400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_12405 PF13193 AMP-binding enzyme C-terminal domain DLD53_12405 PF00501 AMP-binding enzyme DLD53_12410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLD53_12410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DLD53_12415 PF00171 Aldehyde dehydrogenase family DLD53_12425 PF00324 Amino acid permease DLD53_12430 PF00324 Amino acid permease DLD53_12435 PF01042 Endoribonuclease L-PSP DLD53_12440 PF00842 Alanine racemase, C-terminal domain DLD53_12440 PF01168 Alanine racemase, N-terminal domain DLD53_12445 PF01266 FAD dependent oxidoreductase DLD53_12450 PF01037 Lrp/AsnC ligand binding domain DLD53_12460 PF00593 TonB dependent receptor DLD53_12460 PF07715 TonB-dependent Receptor Plug Domain DLD53_12475 PF00849 RNA pseudouridylate synthase DLD53_12490 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_12490 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_12505 PF00293 NUDIX domain DLD53_12525 PF00330 Aconitase family (aconitate hydratase) DLD53_12525 PF00694 Aconitase C-terminal domain DLD53_12530 PF00285 Citrate synthase, C-terminal domain DLD53_12540 PF07729 FCD domain DLD53_12540 PF00392 Bacterial regulatory proteins, gntR family DLD53_12550 PF00155 Aminotransferase class I and II DLD53_12555 PF09330 D-lactate dehydrogenase, membrane binding DLD53_12555 PF01565 FAD binding domain DLD53_12560 PF01070 FMN-dependent dehydrogenase DLD53_12565 PF07729 FCD domain DLD53_12565 PF00392 Bacterial regulatory proteins, gntR family DLD53_12570 PF02652 L-lactate permease DLD53_12575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLD53_12575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLD53_12575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLD53_12575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLD53_12580 PF16363 GDP-mannose 4,6 dehydratase DLD53_12585 PF00342 Phosphoglucose isomerase DLD53_12590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DLD53_12590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DLD53_12590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DLD53_12595 PF00483 Nucleotidyl transferase DLD53_12600 PF02397 Bacterial sugar transferase DLD53_12605 PF00953 Glycosyl transferase family 4 DLD53_12610 PF01370 NAD dependent epimerase/dehydratase family DLD53_12615 PF13579 Glycosyl transferase 4-like domain DLD53_12620 PF02350 UDP-N-acetylglucosamine 2-epimerase DLD53_12625 PF01370 NAD dependent epimerase/dehydratase family DLD53_12630 PF08485 Polysaccharide biosynthesis protein C-terminal DLD53_12630 PF02719 Polysaccharide biosynthesis protein DLD53_12655 PF01370 NAD dependent epimerase/dehydratase family DLD53_12660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DLD53_12660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DLD53_12660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DLD53_12665 PF10531 SLBB domain DLD53_12665 PF02563 Polysaccharide biosynthesis/export protein DLD53_12665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DLD53_12670 PF01451 Low molecular weight phosphotyrosine protein phosphatase DLD53_12675 PF13807 G-rich domain on putative tyrosine kinase DLD53_12675 PF13614 AAA domain DLD53_12675 PF02706 Chain length determinant protein DLD53_12680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DLD53_12680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_12685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DLD53_12685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_12690 PF03023 Lipid II flippase MurJ DLD53_12695 PF01510 N-acetylmuramoyl-L-alanine amidase DLD53_12700 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DLD53_12700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DLD53_12710 PF04185 Phosphoesterase family DLD53_12710 PF05506 Domain of unknown function (DUF756) DLD53_12720 PF03725 3' exoribonuclease family, domain 2 DLD53_12720 PF01138 3' exoribonuclease family, domain 1 DLD53_12725 PF00487 Fatty acid desaturase DLD53_12730 PF00175 Oxidoreductase NAD-binding domain DLD53_12730 PF00970 Oxidoreductase FAD-binding domain DLD53_12730 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_12735 PF00440 Bacterial regulatory proteins, tetR family DLD53_12740 PF00440 Bacterial regulatory proteins, tetR family DLD53_12740 PF08360 QacR-like protein, C-terminal region DLD53_12745 PF01323 DSBA-like thioredoxin domain DLD53_12755 PF13419 Haloacid dehalogenase-like hydrolase DLD53_12760 PF00106 short chain dehydrogenase DLD53_12775 PF00696 Amino acid kinase family DLD53_12775 PF00583 Acetyltransferase (GNAT) family DLD53_12780 PF09084 NMT1/THI5 like DLD53_12785 PF09084 NMT1/THI5 like DLD53_12790 PF00296 Luciferase-like monooxygenase DLD53_12795 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_12800 PF00005 ABC transporter DLD53_12805 PF08362 YcdC-like protein, C-terminal region DLD53_12805 PF00440 Bacterial regulatory proteins, tetR family DLD53_12810 PF01048 Phosphorylase superfamily DLD53_12820 PF01687 Riboflavin kinase DLD53_12820 PF06574 FAD synthetase DLD53_12825 PF06827 Zinc finger found in FPG and IleRS DLD53_12825 PF00133 tRNA synthetases class I (I, L, M and V) DLD53_12825 PF08264 Anticodon-binding domain of tRNA DLD53_12830 PF01252 Signal peptidase (SPase) II DLD53_12835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_12880 PF00579 tRNA synthetases class I (W and Y) DLD53_12885 PF03702 Anhydro-N-acetylmuramic acid kinase DLD53_12890 PF00561 alpha/beta hydrolase fold DLD53_12895 PF01521 Iron-sulphur cluster biosynthesis DLD53_12915 PF00005 ABC transporter DLD53_12915 PF12848 ABC transporter DLD53_12920 PF09335 SNARE associated Golgi protein DLD53_12930 PF18053 DNA gyrase B subunit insert domain DLD53_12930 PF00204 DNA gyrase B DLD53_12930 PF00986 DNA gyrase B subunit, carboxyl terminus DLD53_12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_12930 PF01751 Toprim domain DLD53_12935 PF02463 RecF/RecN/SMC N terminal domain DLD53_12940 PF00712 DNA polymerase III beta subunit, N-terminal domain DLD53_12940 PF02767 DNA polymerase III beta subunit, central domain DLD53_12940 PF02768 DNA polymerase III beta subunit, C-terminal domain DLD53_12945 PF11638 DnaA N-terminal domain DLD53_12945 PF08299 Bacterial dnaA protein helix-turn-helix DLD53_12945 PF00308 Bacterial dnaA protein DLD53_12950 PF00468 Ribosomal protein L34 DLD53_12955 PF00825 Ribonuclease P DLD53_12960 PF01809 Putative membrane protein insertion efficiency factor DLD53_12965 PF14849 YidC periplasmic domain DLD53_12965 PF02096 60Kd inner membrane protein DLD53_12970 PF10396 GTP-binding protein TrmE N-terminus DLD53_12970 PF01926 50S ribosome-binding GTPase DLD53_12970 PF12631 MnmE helical domain DLD53_12975 PF02583 Metal-sensitive transcriptional repressor DLD53_12980 PF01545 Cation efflux family DLD53_12980 PF16916 Dimerisation domain of Zinc Transporter DLD53_12985 PF10411 Disulfide bond isomerase protein N-terminus DLD53_12985 PF13098 Thioredoxin-like domain DLD53_12995 PF00156 Phosphoribosyl transferase domain DLD53_13000 PF01979 Amidohydrolase family DLD53_13005 PF00355 Rieske [2Fe-2S] domain DLD53_13010 PF03738 Glutathionylspermidine synthase preATP-grasp DLD53_13025 PF03741 Integral membrane protein TerC family DLD53_13030 PF01569 PAP2 superfamily DLD53_13040 PF01225 Mur ligase family, catalytic domain DLD53_13040 PF02875 Mur ligase family, glutamate ligase domain DLD53_13040 PF08245 Mur ligase middle domain DLD53_13055 PF00731 AIR carboxylase DLD53_13060 PF02222 ATP-grasp domain DLD53_13060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DLD53_13065 PF13406 Transglycosylase SLT domain DLD53_13085 PF00012 Hsp70 protein DLD53_13090 PF01025 GrpE DLD53_13115 PF07859 alpha/beta hydrolase fold DLD53_13120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DLD53_13180 PF01189 16S rRNA methyltransferase RsmB/F DLD53_13180 PF01029 NusB family DLD53_13185 PF00551 Formyl transferase DLD53_13185 PF02911 Formyl transferase, C-terminal domain DLD53_13190 PF00920 Dehydratase family DLD53_13205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_13205 PF03466 LysR substrate binding domain DLD53_13210 PF00860 Permease family DLD53_13215 PF00311 Phosphoenolpyruvate carboxylase DLD53_13220 PF00440 Bacterial regulatory proteins, tetR family DLD53_13220 PF08361 MAATS-type transcriptional repressor, C-terminal region DLD53_13225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_13230 PF00873 AcrB/AcrD/AcrF family DLD53_13240 PF01556 DnaJ C terminal domain DLD53_13240 PF00684 DnaJ central domain DLD53_13240 PF00226 DnaJ domain DLD53_13250 PF05173 Dihydrodipicolinate reductase, C-terminus DLD53_13250 PF01113 Dihydrodipicolinate reductase, N-terminus DLD53_13260 PF07690 Major Facilitator Superfamily DLD53_13265 PF00248 Aldo/keto reductase family DLD53_13270 PF03466 LysR substrate binding domain DLD53_13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_13285 PF00155 Aminotransferase class I and II DLD53_13285 PF00392 Bacterial regulatory proteins, gntR family DLD53_13290 PF00107 Zinc-binding dehydrogenase DLD53_13290 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_13295 PF03352 Methyladenine glycosylase DLD53_13310 PF10576 Iron-sulfur binding domain of endonuclease III DLD53_13310 PF14815 NUDIX domain DLD53_13310 PF00730 HhH-GPD superfamily base excision DNA repair protein DLD53_13310 PF00633 Helix-hairpin-helix motif DLD53_13325 PF07043 Protein of unknown function (DUF1328) DLD53_13330 PF03692 Putative zinc- or iron-chelating domain DLD53_13335 PF07995 Glucose / Sorbosone dehydrogenase DLD53_13340 PF16193 AAA C-terminal domain DLD53_13340 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_13340 PF12002 MgsA AAA+ ATPase C terminal DLD53_13345 PF01226 Formate/nitrite transporter DLD53_13360 PF01259 SAICAR synthetase DLD53_13370 PF00701 Dihydrodipicolinate synthetase family DLD53_13375 PF00857 Isochorismatase family DLD53_13380 PF01758 Sodium Bile acid symporter family DLD53_13385 PF01554 MatE DLD53_13390 PF04463 Protein of unknown function (DUF523) DLD53_13395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DLD53_13405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DLD53_13410 PF14497 Glutathione S-transferase, C-terminal domain DLD53_13410 PF02798 Glutathione S-transferase, N-terminal domain DLD53_13420 PF00324 Amino acid permease DLD53_13430 PF07683 Cobalamin synthesis protein cobW C-terminal domain DLD53_13430 PF02492 CobW/HypB/UreG, nucleotide-binding domain DLD53_13440 PF07702 UTRA domain DLD53_13440 PF00392 Bacterial regulatory proteins, gntR family DLD53_13445 PF05962 HutD DLD53_13450 PF01175 Urocanase Rossmann-like domain DLD53_13450 PF17391 Urocanase N-terminal domain DLD53_13450 PF17392 Urocanase C-terminal domain DLD53_13455 PF00221 Aromatic amino acid lyase DLD53_13460 PF00324 Amino acid permease DLD53_13465 PF01979 Amidohydrolase family DLD53_13470 PF00491 Arginase family DLD53_13480 PF13419 Haloacid dehalogenase-like hydrolase DLD53_13485 PF01177 Asp/Glu/Hydantoin racemase DLD53_13490 PF01380 SIS domain DLD53_13495 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_13495 PF14602 Hexapeptide repeat of succinyl-transferase DLD53_13495 PF12804 MobA-like NTP transferase domain DLD53_13500 PF04608 Phosphatidylglycerophosphatase A DLD53_13505 PF00586 AIR synthase related protein, N-terminal domain DLD53_13505 PF02769 AIR synthase related protein, C-terminal domain DLD53_13510 PF01029 NusB family DLD53_13515 PF00885 6,7-dimethyl-8-ribityllumazine synthase DLD53_13520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DLD53_13520 PF00925 GTP cyclohydrolase II DLD53_13550 PF02580 D-Tyr-tRNA(Tyr) deacylase DLD53_13555 PF06628 Catalase-related immune-responsive DLD53_13555 PF00199 Catalase DLD53_13565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DLD53_13565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DLD53_13570 PF00581 Rhodanese-like domain DLD53_13575 PF02666 Phosphatidylserine decarboxylase DLD53_13580 PF03069 Acetamidase/Formamidase family DLD53_13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_13595 PF00512 His Kinase A (phospho-acceptor) domain DLD53_13595 PF00989 PAS fold DLD53_13595 PF11808 Phosphate regulon sensor protein PhoR DLD53_13600 PF00072 Response regulator receiver domain DLD53_13600 PF00486 Transcriptional regulatory protein, C terminal DLD53_13610 PF00106 short chain dehydrogenase DLD53_13615 PF01554 MatE DLD53_13620 PF00155 Aminotransferase class I and II DLD53_13625 PF04286 Protein of unknown function (DUF445) DLD53_13640 PF04262 Glutamate-cysteine ligase DLD53_13645 PF02600 Disulfide bond formation protein DsbB DLD53_13650 PF04717 Type VI secretion system, phage-baseplate injector DLD53_13655 PF00182 Chitinase class I DLD53_13680 PF05728 Uncharacterised protein family (UPF0227) DLD53_13685 PF01751 Toprim domain DLD53_13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_13685 PF00986 DNA gyrase B subunit, carboxyl terminus DLD53_13685 PF00204 DNA gyrase B DLD53_13690 PF04115 Ureidoglycolate lyase DLD53_13695 PF03561 Allantoicase repeat DLD53_13700 PF01494 FAD binding domain DLD53_13710 PF00860 Permease family DLD53_13715 PF00576 HIUase/Transthyretin family DLD53_13745 PF11412 Disulphide bond corrector protein DsbC DLD53_13745 PF02683 Cytochrome C biogenesis protein transmembrane region DLD53_13755 PF07859 alpha/beta hydrolase fold DLD53_13765 PF03960 ArsC family DLD53_13770 PF03372 Endonuclease/Exonuclease/phosphatase family DLD53_13775 PF00156 Phosphoribosyl transferase domain DLD53_13780 PF07715 TonB-dependent Receptor Plug Domain DLD53_13780 PF00593 TonB dependent receptor DLD53_13790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DLD53_13790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DLD53_13795 PF04101 Glycosyltransferase family 28 C-terminal domain DLD53_13795 PF03033 Glycosyltransferase family 28 N-terminal domain DLD53_13800 PF08245 Mur ligase middle domain DLD53_13800 PF02875 Mur ligase family, glutamate ligase domain DLD53_13800 PF01225 Mur ligase family, catalytic domain DLD53_13805 PF01820 D-ala D-ala ligase N-terminus DLD53_13805 PF07478 D-ala D-ala ligase C-terminus DLD53_13810 PF03799 Cell division protein FtsQ DLD53_13810 PF08478 POTRA domain, FtsQ-type DLD53_13815 PF02491 SHS2 domain inserted in FTSA DLD53_13820 PF12327 FtsZ family, C-terminal domain DLD53_13820 PF00091 Tubulin/FtsZ family, GTPase domain DLD53_13825 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DLD53_13835 PF01551 Peptidase family M23 DLD53_13840 PF00456 Transketolase, thiamine diphosphate binding domain DLD53_13840 PF17831 Pyruvate dehydrogenase E1 component middle domain DLD53_13845 PF00364 Biotin-requiring enzyme DLD53_13845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLD53_13845 PF02817 e3 binding domain DLD53_13855 PF01169 Uncharacterized protein family UPF0016 DLD53_13865 PF13936 Helix-turn-helix domain DLD53_13865 PF00665 Integrase core domain DLD53_13875 PF01613 Flavin reductase like domain DLD53_13875 PF00258 Flavodoxin DLD53_13880 PF03692 Putative zinc- or iron-chelating domain DLD53_13885 PF00478 IMP dehydrogenase / GMP reductase domain DLD53_13885 PF00571 CBS domain DLD53_13890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLD53_13890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLD53_13890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLD53_13890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLD53_13895 PF01243 Pyridoxamine 5'-phosphate oxidase DLD53_13895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DLD53_13900 PF02272 DHHA1 domain DLD53_13900 PF17768 RecJ OB domain DLD53_13900 PF01368 DHH family DLD53_13920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_13925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DLD53_13930 PF04452 RNA methyltransferase DLD53_13935 PF00924 Mechanosensitive ion channel DLD53_13945 PF16177 Acetyl-coenzyme A synthetase N-terminus DLD53_13945 PF13193 AMP-binding enzyme C-terminal domain DLD53_13945 PF00501 AMP-binding enzyme DLD53_13950 PF00857 Isochorismatase family DLD53_13955 PF01037 Lrp/AsnC ligand binding domain DLD53_13960 PF00296 Luciferase-like monooxygenase DLD53_13965 PF03358 NADPH-dependent FMN reductase DLD53_13970 PF00072 Response regulator receiver domain DLD53_13970 PF00196 Bacterial regulatory proteins, luxR family DLD53_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_13980 PF00512 His Kinase A (phospho-acceptor) domain DLD53_13980 PF01627 Hpt domain DLD53_13980 PF00672 HAMP domain DLD53_13980 PF00072 Response regulator receiver domain DLD53_13985 PF04341 Protein of unknown function, DUF485 DLD53_13990 PF00474 Sodium:solute symporter family DLD53_14000 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_14010 PF00990 Diguanylate cyclase, GGDEF domain DLD53_14010 PF17158 Membrane-associated sensor, integral membrane domain DLD53_14015 PF17760 UvrA interaction domain DLD53_14015 PF17755 UvrA DNA-binding domain DLD53_14015 PF00005 ABC transporter DLD53_14020 PF00440 Bacterial regulatory proteins, tetR family DLD53_14020 PF16925 Tetracyclin repressor-like, C-terminal domain DLD53_14025 PF00107 Zinc-binding dehydrogenase DLD53_14025 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_14035 PF06942 GlpM protein DLD53_14040 PF08543 Phosphomethylpyrimidine kinase DLD53_14040 PF03070 TENA/THI-4/PQQC family DLD53_14040 PF02581 Thiamine monophosphate synthase DLD53_14050 PF07690 Major Facilitator Superfamily DLD53_14055 PF00436 Single-strand binding protein family DLD53_14065 PF03591 AzlC protein DLD53_14075 PF00324 Amino acid permease DLD53_14080 PF00155 Aminotransferase class I and II DLD53_14080 PF00392 Bacterial regulatory proteins, gntR family DLD53_14085 PF00202 Aminotransferase class-III DLD53_14090 PF00171 Aldehyde dehydrogenase family DLD53_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_14100 PF00857 Isochorismatase family DLD53_14105 PF05726 Pirin C-terminal cupin domain DLD53_14105 PF02678 Pirin DLD53_14110 PF01593 Flavin containing amine oxidoreductase DLD53_14130 PF07690 Major Facilitator Superfamily DLD53_14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_14135 PF03466 LysR substrate binding domain DLD53_14160 PF00248 Aldo/keto reductase family DLD53_14165 PF02311 AraC-like ligand binding domain DLD53_14165 PF12833 Helix-turn-helix domain DLD53_14185 PF01638 HxlR-like helix-turn-helix DLD53_14200 PF01638 HxlR-like helix-turn-helix DLD53_14210 PF02525 Flavodoxin-like fold DLD53_14230 PF12833 Helix-turn-helix domain DLD53_14240 PF02705 K+ potassium transporter DLD53_14265 PF00230 Major intrinsic protein DLD53_14280 PF00977 Histidine biosynthesis protein DLD53_14285 PF01636 Phosphotransferase enzyme family DLD53_14310 PF00977 Histidine biosynthesis protein DLD53_14325 PF00117 Glutamine amidotransferase class-I DLD53_14330 PF00475 Imidazoleglycerol-phosphate dehydratase DLD53_14350 PF00583 Acetyltransferase (GNAT) family DLD53_14355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DLD53_14355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DLD53_14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_14365 PF00672 HAMP domain DLD53_14365 PF00512 His Kinase A (phospho-acceptor) domain DLD53_14370 PF00072 Response regulator receiver domain DLD53_14370 PF00486 Transcriptional regulatory protein, C terminal DLD53_14375 PF00575 S1 RNA binding domain DLD53_14375 PF09371 Tex-like protein N-terminal domain DLD53_14375 PF16921 Tex protein YqgF-like domain DLD53_14375 PF17674 HHH domain DLD53_14380 PF01740 STAS domain DLD53_14380 PF00916 Sulfate permease family DLD53_14385 PF00106 short chain dehydrogenase DLD53_14390 PF01053 Cys/Met metabolism PLP-dependent enzyme DLD53_14395 PF00005 ABC transporter DLD53_14395 PF12848 ABC transporter DLD53_14420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_14420 PF00529 HlyD membrane-fusion protein of T1SS DLD53_14425 PF00873 AcrB/AcrD/AcrF family DLD53_14430 PF01545 Cation efflux family DLD53_14460 PF00324 Amino acid permease DLD53_14475 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLD53_14490 PF01795 MraW methylase family DLD53_14500 PF00905 Penicillin binding protein transpeptidase domain DLD53_14500 PF03717 Penicillin-binding Protein dimerisation domain DLD53_14505 PF08245 Mur ligase middle domain DLD53_14505 PF02875 Mur ligase family, glutamate ligase domain DLD53_14505 PF01225 Mur ligase family, catalytic domain DLD53_14510 PF01225 Mur ligase family, catalytic domain DLD53_14510 PF02875 Mur ligase family, glutamate ligase domain DLD53_14510 PF08245 Mur ligase middle domain DLD53_14515 PF00953 Glycosyl transferase family 4 DLD53_14525 PF13847 Methyltransferase domain DLD53_14530 PF00905 Penicillin binding protein transpeptidase domain DLD53_14530 PF00912 Transglycosylase DLD53_14530 PF17092 Penicillin-binding protein OB-like domain DLD53_14555 PF00263 Bacterial type II and III secretion system protein DLD53_14555 PF11741 AMIN domain DLD53_14555 PF07660 Secretin and TonB N terminus short domain DLD53_14555 PF03958 Bacterial type II/III secretion system short domain DLD53_14560 PF01202 Shikimate kinase DLD53_14565 PF01761 3-dehydroquinate synthase DLD53_14575 PF00310 Glutamine amidotransferases class-II DLD53_14575 PF04898 Glutamate synthase central domain DLD53_14575 PF01645 Conserved region in glutamate synthase DLD53_14575 PF01493 GXGXG motif DLD53_14580 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DLD53_14580 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_14590 PF04011 LemA family DLD53_14595 PF04536 TPM domain DLD53_14605 PF07963 Prokaryotic N-terminal methylation motif DLD53_14605 PF00114 Pilin (bacterial filament) DLD53_14615 PF15864 Protein glycosylation ligase DLD53_14615 PF04932 O-Antigen ligase DLD53_14615 PF11846 Virulence factor membrane-bound polymerase, C-terminal DLD53_14620 PF00210 Ferritin-like domain DLD53_14625 PF04324 BFD-like [2Fe-2S] binding domain DLD53_14630 PF01042 Endoribonuclease L-PSP DLD53_14635 PF04607 Region found in RelA / SpoT proteins DLD53_14635 PF13291 ACT domain DLD53_14635 PF02824 TGS domain DLD53_14645 PF01192 RNA polymerase Rpb6 DLD53_14650 PF00625 Guanylate kinase DLD53_14655 PF02401 LytB protein DLD53_14700 PF00886 Ribosomal protein S16 DLD53_14705 PF05239 PRC-barrel domain DLD53_14705 PF01782 RimM N-terminal domain DLD53_14710 PF01746 tRNA (Guanine-1)-methyltransferase DLD53_14715 PF01245 Ribosomal protein L19 DLD53_14720 PF00561 alpha/beta hydrolase fold DLD53_14725 PF03280 Proteobacterial lipase chaperone protein DLD53_14730 PF09157 Pseudouridine synthase II TruB, C-terminal DLD53_14730 PF16198 tRNA pseudouridylate synthase B C-terminal domain DLD53_14730 PF01509 TruB family pseudouridylate synthase (N terminal domain) DLD53_14735 PF01925 Sulfite exporter TauE/SafE DLD53_14745 PF00892 EamA-like transporter family DLD53_14750 PF00892 EamA-like transporter family DLD53_14755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLD53_14755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLD53_14760 PF02913 FAD linked oxidases, C-terminal domain DLD53_14760 PF01565 FAD binding domain DLD53_14770 PF03992 Antibiotic biosynthesis monooxygenase DLD53_14775 PF02525 Flavodoxin-like fold DLD53_14785 PF07690 Major Facilitator Superfamily DLD53_14790 PF12805 FUSC-like inner membrane protein yccS DLD53_14795 PF00080 Copper/zinc superoxide dismutase (SODC) DLD53_14800 PF01594 AI-2E family transporter DLD53_14805 PF13614 AAA domain DLD53_14835 PF00324 Amino acid permease DLD53_14840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DLD53_14840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DLD53_14845 PF00202 Aminotransferase class-III DLD53_14850 PF04958 Arginine N-succinyltransferase beta subunit DLD53_14855 PF00171 Aldehyde dehydrogenase family DLD53_14860 PF04996 Succinylarginine dihydrolase DLD53_14865 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DLD53_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_14895 PF03466 LysR substrate binding domain DLD53_14900 PF00892 EamA-like transporter family DLD53_14910 PF02092 Glycyl-tRNA synthetase beta subunit DLD53_14910 PF05746 DALR anticodon binding domain DLD53_14915 PF02091 Glycyl-tRNA synthetase alpha subunit DLD53_14940 PF00571 CBS domain DLD53_14945 PF04024 PspC domain DLD53_14955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_14955 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_14955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_14955 PF12806 Acetyl-CoA dehydrogenase C-terminal like DLD53_14965 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DLD53_14965 PF01488 Shikimate / quinate 5-dehydrogenase DLD53_14965 PF08501 Shikimate dehydrogenase substrate binding domain DLD53_14970 PF01218 Coproporphyrinogen III oxidase DLD53_14975 PF00925 GTP cyclohydrolase II DLD53_14980 PF02779 Transketolase, pyrimidine binding domain DLD53_14980 PF02780 Transketolase, C-terminal domain DLD53_14980 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DLD53_14985 PF00459 Inositol monophosphatase family DLD53_14990 PF00271 Helicase conserved C-terminal domain DLD53_14990 PF00270 DEAD/DEAH box helicase DLD53_14990 PF03880 DbpA RNA binding domain DLD53_14990 PF12343 Cold shock protein DEAD box A DLD53_14995 PF00005 ABC transporter DLD53_15000 PF02405 Permease MlaE DLD53_15010 PF05494 MlaC protein DLD53_15020 PF01544 CorA-like Mg2+ transporter protein DLD53_15025 PF03641 Possible lysine decarboxylase DLD53_15030 PF00293 NUDIX domain DLD53_15035 PF00156 Phosphoribosyl transferase domain DLD53_15040 PF00270 DEAD/DEAH box helicase DLD53_15040 PF17191 RecG wedge domain DLD53_15040 PF00271 Helicase conserved C-terminal domain DLD53_15055 PF01553 Acyltransferase DLD53_15065 PF00375 Sodium:dicarboxylate symporter family DLD53_15075 PF01926 50S ribosome-binding GTPase DLD53_15080 PF02082 Transcriptional regulator DLD53_15085 PF00042 Globin DLD53_15085 PF00175 Oxidoreductase NAD-binding domain DLD53_15085 PF00970 Oxidoreductase FAD-binding domain DLD53_15090 PF05872 Bacterial protein of unknown function (DUF853) DLD53_15095 PF01053 Cys/Met metabolism PLP-dependent enzyme DLD53_15100 PF00117 Glutamine amidotransferase class-I DLD53_15105 PF00338 Ribosomal protein S10p/S20e DLD53_15110 PF00297 Ribosomal protein L3 DLD53_15115 PF00573 Ribosomal protein L4/L1 family DLD53_15120 PF00276 Ribosomal protein L23 DLD53_15125 PF03947 Ribosomal Proteins L2, C-terminal domain DLD53_15125 PF00181 Ribosomal Proteins L2, RNA binding domain DLD53_15130 PF00203 Ribosomal protein S19 DLD53_15135 PF00237 Ribosomal protein L22p/L17e DLD53_15140 PF00189 Ribosomal protein S3, C-terminal domain DLD53_15140 PF07650 KH domain DLD53_15145 PF00252 Ribosomal protein L16p/L10e DLD53_15150 PF00831 Ribosomal L29 protein DLD53_15155 PF00366 Ribosomal protein S17 DLD53_15160 PF00238 Ribosomal protein L14p/L23e DLD53_15165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DLD53_15165 PF00467 KOW motif DLD53_15170 PF00673 ribosomal L5P family C-terminus DLD53_15170 PF00281 Ribosomal protein L5 DLD53_15175 PF00253 Ribosomal protein S14p/S29e DLD53_15180 PF00410 Ribosomal protein S8 DLD53_15185 PF00347 Ribosomal protein L6 DLD53_15190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DLD53_15195 PF03719 Ribosomal protein S5, C-terminal domain DLD53_15195 PF00333 Ribosomal protein S5, N-terminal domain DLD53_15200 PF00327 Ribosomal protein L30p/L7e DLD53_15205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DLD53_15210 PF00344 SecY translocase DLD53_15215 PF00444 Ribosomal protein L36 DLD53_15220 PF00416 Ribosomal protein S13/S18 DLD53_15225 PF00411 Ribosomal protein S11 DLD53_15230 PF01479 S4 domain DLD53_15230 PF00163 Ribosomal protein S4/S9 N-terminal domain DLD53_15235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DLD53_15235 PF01000 RNA polymerase Rpb3/RpoA insert domain DLD53_15235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DLD53_15240 PF01196 Ribosomal protein L17 DLD53_15245 PF00743 Flavin-binding monooxygenase-like DLD53_15250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_15250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_15250 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_15255 PF03937 Flavinator of succinate dehydrogenase DLD53_15285 PF09526 Probable metal-binding protein (DUF2387) DLD53_15290 PF01432 Peptidase family M3 DLD53_15295 PF08461 Ribonuclease R winged-helix domain DLD53_15295 PF08206 Ribonuclease B OB domain DLD53_15295 PF00773 RNB domain DLD53_15295 PF17876 Cold shock domain DLD53_15295 PF00575 S1 RNA binding domain DLD53_15335 PF01557 Fumarylacetoacetate (FAA) hydrolase family DLD53_15340 PF12833 Helix-turn-helix domain DLD53_15345 PF00892 EamA-like transporter family DLD53_15350 PF03631 Virulence factor BrkB DLD53_15355 PF03358 NADPH-dependent FMN reductase DLD53_15380 PF02130 Uncharacterized protein family UPF0054 DLD53_15385 PF02562 PhoH-like protein DLD53_15390 PF00919 Uncharacterized protein family UPF0004 DLD53_15390 PF01938 TRAM domain DLD53_15390 PF04055 Radical SAM superfamily DLD53_15395 PF01551 Peptidase family M23 DLD53_15395 PF10145 Phage-related minor tail protein DLD53_15395 PF01464 Transglycosylase SLT domain DLD53_15405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DLD53_15405 PF00056 lactate/malate dehydrogenase, NAD binding domain DLD53_15425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DLD53_15430 PF01066 CDP-alcohol phosphatidyltransferase DLD53_15475 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_15475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_15475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_15480 PF00440 Bacterial regulatory proteins, tetR family DLD53_15480 PF17932 Tetracyclin repressor-like, C-terminal domain DLD53_15495 PF01039 Carboxyl transferase domain DLD53_15500 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_15500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_15500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_15510 PF02785 Biotin carboxylase C-terminal domain DLD53_15510 PF00364 Biotin-requiring enzyme DLD53_15510 PF00289 Biotin carboxylase, N-terminal domain DLD53_15510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLD53_15520 PF04386 Stringent starvation protein B DLD53_15525 PF13417 Glutathione S-transferase, N-terminal domain DLD53_15525 PF00043 Glutathione S-transferase, C-terminal domain DLD53_15530 PF00380 Ribosomal protein S9/S16 DLD53_15535 PF00572 Ribosomal protein L13 DLD53_15540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DLD53_15545 PF00398 Ribosomal RNA adenine dimethylase DLD53_15550 PF00149 Calcineurin-like phosphoesterase DLD53_15570 PF16360 GTP-binding GTPase Middle Region DLD53_15570 PF01926 50S ribosome-binding GTPase DLD53_15570 PF13167 GTP-binding GTPase N-terminal DLD53_15580 PF13091 PLD-like domain DLD53_15585 PF10518 TAT (twin-arginine translocation) pathway signal sequence DLD53_15585 PF00149 Calcineurin-like phosphoesterase DLD53_15590 PF00691 OmpA family DLD53_15590 PF01389 OmpA-like transmembrane domain DLD53_15595 PF00990 Diguanylate cyclase, GGDEF domain DLD53_15595 PF17152 Periplasmic sensor domain DLD53_15605 PF00665 Integrase core domain DLD53_15605 PF13936 Helix-turn-helix domain DLD53_15635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_15635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLD53_15645 PF00753 Metallo-beta-lactamase superfamily DLD53_15645 PF04273 Putative phosphatase (DUF442) DLD53_15650 PF00561 alpha/beta hydrolase fold DLD53_15655 PF00085 Thioredoxin DLD53_15660 PF03061 Thioesterase superfamily DLD53_15670 PF04461 Protein of unknown function (DUF520) DLD53_15680 PF01266 FAD dependent oxidoreductase DLD53_15680 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DLD53_15690 PF03795 YCII-related domain DLD53_15695 PF04279 Intracellular septation protein A DLD53_15700 PF02811 PHP domain DLD53_15705 PF01062 Bestrophin, RFP-TM, chloride channel DLD53_15710 PF04002 RadC-like JAB domain DLD53_15715 PF02441 Flavoprotein DLD53_15715 PF04127 DNA / pantothenate metabolism flavoprotein DLD53_15720 PF07549 SecD/SecF GG Motif DLD53_15720 PF02355 Protein export membrane protein DLD53_15725 PF13721 SecD export protein N-terminal TM region DLD53_15725 PF07549 SecD/SecF GG Motif DLD53_15725 PF02355 Protein export membrane protein DLD53_15730 PF02699 Preprotein translocase subunit DLD53_15735 PF01702 Queuine tRNA-ribosyltransferase DLD53_15750 PF02547 Queuosine biosynthesis protein DLD53_15760 PF13936 Helix-turn-helix domain DLD53_15760 PF00665 Integrase core domain DLD53_15780 PF00512 His Kinase A (phospho-acceptor) domain DLD53_15780 PF07689 KaiB domain DLD53_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_15785 PF08335 GlnD PII-uridylyltransferase DLD53_15785 PF03710 Glutamate-ammonia ligase adenylyltransferase DLD53_15790 PF01063 Amino-transferase class IV DLD53_15805 PF01522 Polysaccharide deacetylase DLD53_15810 PF00535 Glycosyl transferase family 2 DLD53_15815 PF13439 Glycosyltransferase Family 4 DLD53_15815 PF00534 Glycosyl transferases group 1 DLD53_15850 PF17101 Stealth protein CR1, conserved region 1 DLD53_15850 PF17102 Stealth protein CR3, conserved region 3 DLD53_15850 PF11380 Stealth protein CR2, conserved region 2 DLD53_15855 PF00152 tRNA synthetases class II (D, K and N) DLD53_15855 PF01336 OB-fold nucleic acid binding domain DLD53_15855 PF02938 GAD domain DLD53_15865 PF00593 TonB dependent receptor DLD53_15865 PF07715 TonB-dependent Receptor Plug Domain DLD53_15885 PF06146 Phosphate-starvation-inducible E DLD53_15890 PF02798 Glutathione S-transferase, N-terminal domain DLD53_15890 PF00043 Glutathione S-transferase, C-terminal domain DLD53_15895 PF03466 LysR substrate binding domain DLD53_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_15900 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_15900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_15900 PF12806 Acetyl-CoA dehydrogenase C-terminal like DLD53_15900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_15905 PF02770 Acyl-CoA dehydrogenase, middle domain DLD53_15905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLD53_15905 PF12806 Acetyl-CoA dehydrogenase C-terminal like DLD53_15905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLD53_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_15915 PF00512 His Kinase A (phospho-acceptor) domain DLD53_15915 PF00672 HAMP domain DLD53_15920 PF00072 Response regulator receiver domain DLD53_15920 PF00486 Transcriptional regulatory protein, C terminal DLD53_15925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DLD53_15945 PF01923 Cobalamin adenosyltransferase DLD53_15950 PF07715 TonB-dependent Receptor Plug Domain DLD53_15950 PF00593 TonB dependent receptor DLD53_15955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DLD53_15960 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_15985 PF00290 Tryptophan synthase alpha chain DLD53_15990 PF01039 Carboxyl transferase domain DLD53_15995 PF08245 Mur ligase middle domain DLD53_15995 PF02875 Mur ligase family, glutamate ligase domain DLD53_16010 PF00753 Metallo-beta-lactamase superfamily DLD53_16015 PF00578 AhpC/TSA family DLD53_16015 PF10417 C-terminal domain of 1-Cys peroxiredoxin DLD53_16020 PF07517 SecA DEAD-like domain DLD53_16020 PF01043 SecA preprotein cross-linking domain DLD53_16020 PF07516 SecA Wing and Scaffold domain DLD53_16020 PF02810 SEC-C motif DLD53_16030 PF00083 Sugar (and other) transporter DLD53_16030 PF07690 Major Facilitator Superfamily DLD53_16035 PF03006 Haemolysin-III related DLD53_16060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLD53_16060 PF00378 Enoyl-CoA hydratase/isomerase DLD53_16060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLD53_16065 PF00108 Thiolase, N-terminal domain DLD53_16065 PF02803 Thiolase, C-terminal domain DLD53_16070 PF12833 Helix-turn-helix domain DLD53_16070 PF02311 AraC-like ligand binding domain DLD53_16075 PF02515 CoA-transferase family III DLD53_16080 PF04966 Carbohydrate-selective porin, OprB family DLD53_16085 PF01011 PQQ enzyme repeat DLD53_16090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DLD53_16090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DLD53_16100 PF00893 Small Multidrug Resistance protein DLD53_16110 PF00108 Thiolase, N-terminal domain DLD53_16110 PF02803 Thiolase, C-terminal domain DLD53_16120 PF00691 OmpA family DLD53_16120 PF13505 Outer membrane protein beta-barrel domain DLD53_16130 PF01139 tRNA-splicing ligase RtcB DLD53_16135 PF00324 Amino acid permease DLD53_16140 PF08468 Methyltransferase small domain N-terminal DLD53_16140 PF05175 Methyltransferase small domain DLD53_16155 PF01741 Large-conductance mechanosensitive channel, MscL DLD53_16170 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DLD53_16170 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DLD53_16170 PF06827 Zinc finger found in FPG and IleRS DLD53_16175 PF02245 Methylpurine-DNA glycosylase (MPG) DLD53_16180 PF07715 TonB-dependent Receptor Plug Domain DLD53_16180 PF00593 TonB dependent receptor DLD53_16185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DLD53_16190 PF03547 Membrane transport protein DLD53_16200 PF13098 Thioredoxin-like domain DLD53_16200 PF10411 Disulfide bond isomerase protein N-terminus DLD53_16205 PF01571 Aminomethyltransferase folate-binding domain DLD53_16215 PF04343 Protein of unknown function, DUF488 DLD53_16220 PF08274 PhnA Zinc-Ribbon DLD53_16220 PF03831 PhnA domain DLD53_16225 PF07411 Domain of unknown function (DUF1508) DLD53_16230 PF04073 Aminoacyl-tRNA editing domain DLD53_16230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLD53_16230 PF03129 Anticodon binding domain DLD53_16235 PF00873 AcrB/AcrD/AcrF family DLD53_16250 PF00072 Response regulator receiver domain DLD53_16255 PF00072 Response regulator receiver domain DLD53_16260 PF01584 CheW-like domain DLD53_16265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DLD53_16265 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DLD53_16270 PF00072 Response regulator receiver domain DLD53_16270 PF01627 Hpt domain DLD53_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_16270 PF01584 CheW-like domain DLD53_16280 PF07687 Peptidase dimerisation domain DLD53_16280 PF01546 Peptidase family M20/M25/M40 DLD53_16285 PF08085 Entericidin EcnA/B family DLD53_16295 PF04304 Protein of unknown function (DUF454) DLD53_16300 PF03734 L,D-transpeptidase catalytic domain DLD53_16300 PF17969 L,D-transpeptidase C-terminal domain DLD53_16340 PF00667 FAD binding domain DLD53_16340 PF00175 Oxidoreductase NAD-binding domain DLD53_16340 PF00258 Flavodoxin DLD53_16350 PF12805 FUSC-like inner membrane protein yccS DLD53_16355 PF07690 Major Facilitator Superfamily DLD53_16360 PF00881 Nitroreductase family DLD53_16375 PF01235 Sodium:alanine symporter family DLD53_16380 PF01734 Patatin-like phospholipase DLD53_16385 PF00291 Pyridoxal-phosphate dependent enzyme DLD53_16385 PF13291 ACT domain DLD53_16390 PF05992 SbmA/BacA-like family DLD53_16420 PF02934 GatB/GatE catalytic domain DLD53_16420 PF02637 GatB domain DLD53_16425 PF01425 Amidase DLD53_16430 PF02686 Glu-tRNAGln amidotransferase C subunit DLD53_16440 PF04085 rod shape-determining protein MreC DLD53_16445 PF04093 rod shape-determining protein MreD DLD53_16450 PF02545 Maf-like protein DLD53_16455 PF10150 Ribonuclease E/G family DLD53_16455 PF00575 S1 RNA binding domain DLD53_16465 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DLD53_16465 PF06974 Protein of unknown function (DUF1298) DLD53_16470 PF01507 Phosphoadenosine phosphosulfate reductase family DLD53_16485 PF02525 Flavodoxin-like fold DLD53_16505 PF02673 Bacitracin resistance protein BacA DLD53_16510 PF06719 AraC-type transcriptional regulator N-terminus DLD53_16510 PF12833 Helix-turn-helix domain DLD53_16515 PF00698 Acyl transferase domain DLD53_16515 PF09277 Erythronolide synthase, docking DLD53_16515 PF14765 Polyketide synthase dehydratase DLD53_16515 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_16515 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_16515 PF00550 Phosphopantetheine attachment site DLD53_16515 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_16515 PF08659 KR domain DLD53_16515 PF16197 Ketoacyl-synthetase C-terminal extension DLD53_16515 PF08990 Erythronolide synthase docking DLD53_16520 PF01965 DJ-1/PfpI family DLD53_16590 PF12161 HsdM N-terminal domain DLD53_16590 PF02384 N-6 DNA Methylase DLD53_16625 PF14528 LAGLIDADG-like domain DLD53_16625 PF03796 DnaB-like helicase C terminal domain DLD53_16625 PF00772 DnaB-like helicase N terminal domain DLD53_16680 PF00149 Calcineurin-like phosphoesterase DLD53_16935 PF13356 Arm DNA-binding domain DLD53_16935 PF00589 Phage integrase family DLD53_16945 PF00324 Amino acid permease DLD53_16950 PF04303 PrpF protein DLD53_16955 PF00348 Polyprenyl synthetase DLD53_16960 PF04237 YjbR DLD53_16965 PF01145 SPFH domain / Band 7 family DLD53_16975 PF01734 Patatin-like phospholipase DLD53_16995 PF08019 Phosphoethanolamine transferase EptA/EptB DLD53_16995 PF00884 Sulfatase DLD53_17000 PF00486 Transcriptional regulatory protein, C terminal DLD53_17000 PF00072 Response regulator receiver domain DLD53_17005 PF08521 Two-component sensor kinase N-terminal DLD53_17005 PF00512 His Kinase A (phospho-acceptor) domain DLD53_17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLD53_17015 PF00909 Ammonium Transporter Family DLD53_17025 PF03466 LysR substrate binding domain DLD53_17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_17045 PF08264 Anticodon-binding domain of tRNA DLD53_17045 PF00133 tRNA synthetases class I (I, L, M and V) DLD53_17045 PF10458 Valyl tRNA synthetase tRNA binding arm DLD53_17065 PF01906 Putative heavy-metal-binding DLD53_17070 PF01906 Putative heavy-metal-binding DLD53_17075 PF02321 Outer membrane efflux protein DLD53_17080 PF00873 AcrB/AcrD/AcrF family DLD53_17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLD53_17085 PF00529 HlyD membrane-fusion protein of T1SS DLD53_17090 PF01569 PAP2 superfamily DLD53_17100 PF00348 Polyprenyl synthetase DLD53_17110 PF00829 Ribosomal prokaryotic L21 protein DLD53_17115 PF01016 Ribosomal L27 protein DLD53_17120 PF03548 Outer membrane lipoprotein carrier protein LolA DLD53_17130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLD53_17130 PF02403 Seryl-tRNA synthetase N-terminal domain DLD53_17135 PF14824 Sirohaem biosynthesis protein central DLD53_17135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DLD53_17135 PF10414 Sirohaem synthase dimerisation region DLD53_17140 PF00588 SpoU rRNA Methylase family DLD53_17145 PF01638 HxlR-like helix-turn-helix DLD53_17150 PF03358 NADPH-dependent FMN reductase DLD53_17155 PF13520 Amino acid permease DLD53_17160 PF00465 Iron-containing alcohol dehydrogenase DLD53_17170 PF03099 Biotin/lipoate A/B protein ligase family DLD53_17175 PF04359 Protein of unknown function (DUF493) DLD53_17180 PF04539 Sigma-70 region 3 DLD53_17180 PF04546 Sigma-70, non-essential region DLD53_17180 PF03979 Sigma-70 factor, region 1.1 DLD53_17180 PF00140 Sigma-70 factor, region 1.2 DLD53_17180 PF04545 Sigma-70, region 4 DLD53_17180 PF04542 Sigma-70 region 2 DLD53_17210 PF00285 Citrate synthase, C-terminal domain DLD53_17215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DLD53_17220 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DLD53_17225 PF00890 FAD binding domain DLD53_17225 PF02910 Fumarate reductase flavoprotein C-term DLD53_17230 PF13085 2Fe-2S iron-sulfur cluster binding domain DLD53_17245 PF16078 2-oxoglutarate dehydrogenase N-terminus DLD53_17245 PF00676 Dehydrogenase E1 component DLD53_17245 PF02779 Transketolase, pyrimidine binding domain DLD53_17245 PF16870 2-oxoglutarate dehydrogenase C-terminal DLD53_17250 PF02817 e3 binding domain DLD53_17250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLD53_17250 PF00364 Biotin-requiring enzyme DLD53_17255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLD53_17255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_17260 PF00549 CoA-ligase DLD53_17260 PF08442 ATP-grasp domain DLD53_17265 PF02629 CoA binding domain DLD53_17265 PF00549 CoA-ligase DLD53_17270 PF00579 tRNA synthetases class I (W and Y) DLD53_17275 PF05661 Protein of unknown function (DUF808) DLD53_17280 PF04228 Putative neutral zinc metallopeptidase DLD53_17285 PF00999 Sodium/hydrogen exchanger family DLD53_17330 PF09587 Bacterial capsule synthesis protein PGA_cap DLD53_17340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DLD53_17345 PF00582 Universal stress protein family DLD53_17350 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_17355 PF01272 Transcription elongation factor, GreA/GreB, C-term DLD53_17355 PF03449 Transcription elongation factor, N-terminal DLD53_17360 PF02142 MGS-like domain DLD53_17360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DLD53_17360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLD53_17365 PF00117 Glutamine amidotransferase class-I DLD53_17365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DLD53_17380 PF01985 CRS1 / YhbY (CRM) domain DLD53_17385 PF01728 FtsJ-like methyltransferase DLD53_17390 PF06480 FtsH Extracellular DLD53_17390 PF01434 Peptidase family M41 DLD53_17390 PF00004 ATPase family associated with various cellular activities (AAA) DLD53_17390 PF17862 AAA+ lid domain DLD53_17395 PF00809 Pterin binding enzyme DLD53_17415 PF16655 PhoD-like phosphatase, N-terminal domain DLD53_17415 PF09423 PhoD-like phosphatase DLD53_17430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DLD53_17430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DLD53_17445 PF00083 Sugar (and other) transporter DLD53_17450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLD53_17450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLD53_17455 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DLD53_17455 PF01266 FAD dependent oxidoreductase DLD53_17460 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DLD53_17460 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DLD53_17465 PF00781 Diacylglycerol kinase catalytic domain DLD53_17470 PF00149 Calcineurin-like phosphoesterase DLD53_17480 PF00166 Chaperonin 10 Kd subunit DLD53_17485 PF00118 TCP-1/cpn60 chaperonin family DLD53_17490 PF01219 Prokaryotic diacylglycerol kinase DLD53_17495 PF00753 Metallo-beta-lactamase superfamily DLD53_17500 PF03009 Glycerophosphoryl diester phosphodiesterase family DLD53_17515 PF01435 Peptidase family M48 DLD53_17520 PF01464 Transglycosylase SLT domain DLD53_17530 PF01171 PP-loop family DLD53_17540 PF01464 Transglycosylase SLT domain DLD53_17540 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLD53_17545 PF03449 Transcription elongation factor, N-terminal DLD53_17545 PF01272 Transcription elongation factor, GreA/GreB, C-term DLD53_17560 PF00501 AMP-binding enzyme DLD53_17560 PF00550 Phosphopantetheine attachment site DLD53_17560 PF00975 Thioesterase domain DLD53_17560 PF00668 Condensation domain DLD53_17560 PF13193 AMP-binding enzyme C-terminal domain DLD53_17590 PF00881 Nitroreductase family DLD53_17605 PF02595 Glycerate kinase family DLD53_17610 PF00384 Molybdopterin oxidoreductase DLD53_17615 PF02634 FdhD/NarQ family DLD53_17620 PF06803 Protein of unknown function (DUF1232) DLD53_17625 PF11890 Domain of unknown function (DUF3410) DLD53_17625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLD53_17625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLD53_17630 PF00152 tRNA synthetases class II (D, K and N) DLD53_17640 PF18073 Rubredoxin metal binding domain DLD53_17645 PF00324 Amino acid permease DLD53_17655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DLD53_17655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DLD53_17660 PF01678 Diaminopimelate epimerase DLD53_17665 PF01810 LysE type translocator DLD53_17670 PF02899 Phage integrase, N-terminal SAM-like domain DLD53_17670 PF00589 Phage integrase family DLD53_17675 PF01012 Electron transfer flavoprotein domain DLD53_17680 PF01012 Electron transfer flavoprotein domain DLD53_17680 PF00766 Electron transfer flavoprotein FAD-binding domain DLD53_17685 PF00521 DNA gyrase/topoisomerase IV, subunit A DLD53_17685 PF03989 DNA gyrase C-terminal domain, beta-propeller DLD53_17700 PF00535 Glycosyl transferase family 2 DLD53_17720 PF13533 Biotin-lipoyl like DLD53_17730 PF00266 Aminotransferase class-V DLD53_17740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DLD53_17750 PF12704 MacB-like periplasmic core domain DLD53_17750 PF02687 FtsX-like permease family DLD53_17755 PF00005 ABC transporter DLD53_17760 PF03772 Competence protein DLD53_17760 PF00753 Metallo-beta-lactamase superfamily DLD53_17760 PF13567 Domain of unknown function (DUF4131) DLD53_17770 PF01343 Peptidase family S49 DLD53_17770 PF06965 Na+/H+ antiporter 1 DLD53_17775 PF12697 Alpha/beta hydrolase family DLD53_17780 PF00551 Formyl transferase DLD53_17785 PF02769 AIR synthase related protein, C-terminal domain DLD53_17785 PF00586 AIR synthase related protein, N-terminal domain DLD53_17790 PF01594 AI-2E family transporter DLD53_17795 PF00308 Bacterial dnaA protein DLD53_17795 PF08299 Bacterial dnaA protein helix-turn-helix DLD53_17795 PF11638 DnaA N-terminal domain DLD53_17825 PF00588 SpoU rRNA Methylase family DLD53_17825 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLD53_17830 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DLD53_17840 PF00691 OmpA family DLD53_17845 PF04052 TolB amino-terminal domain DLD53_17845 PF07676 WD40-like Beta Propeller Repeat DLD53_17855 PF02472 Biopolymer transport protein ExbD/TolR DLD53_17860 PF01618 MotA/TolQ/ExbB proton channel family DLD53_17865 PF03061 Thioesterase superfamily DLD53_17870 PF07687 Peptidase dimerisation domain DLD53_17870 PF01546 Peptidase family M20/M25/M40 DLD53_17875 PF05496 Holliday junction DNA helicase RuvB P-loop domain DLD53_17875 PF05491 RuvB C-terminal winged helix domain DLD53_17875 PF17864 RuvB AAA lid domain DLD53_17880 PF01330 RuvA N terminal domain DLD53_17880 PF07499 RuvA, C-terminal domain DLD53_17885 PF01966 HD domain DLD53_17890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DLD53_17890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DLD53_17890 PF02769 AIR synthase related protein, C-terminal domain DLD53_17895 PF07690 Major Facilitator Superfamily DLD53_17900 PF01784 NIF3 (NGG1p interacting factor 3) DLD53_17905 PF00378 Enoyl-CoA hydratase/isomerase DLD53_17910 PF00293 NUDIX domain DLD53_17910 PF01467 Cytidylyltransferase-like DLD53_17920 PF00578 AhpC/TSA family DLD53_17935 PF06508 Queuosine biosynthesis protein QueC DLD53_17945 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_17945 PF14602 Hexapeptide repeat of succinyl-transferase DLD53_17945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DLD53_17955 PF03466 LysR substrate binding domain DLD53_17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_17960 PF12857 TOBE-like domain DLD53_17960 PF00005 ABC transporter DLD53_17965 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_17970 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_17985 PF01063 Amino-transferase class IV DLD53_17990 PF02618 YceG-like family DLD53_17995 PF02223 Thymidylate kinase DLD53_18005 PF00890 FAD binding domain DLD53_18005 PF02910 Fumarate reductase flavoprotein C-term DLD53_18010 PF13180 PDZ domain DLD53_18020 PF06421 GTP-binding protein LepA C-terminus DLD53_18020 PF00679 Elongation factor G C-terminus DLD53_18020 PF00009 Elongation factor Tu GTP binding domain DLD53_18020 PF03144 Elongation factor Tu domain 2 DLD53_18025 PF10502 Signal peptidase, peptidase S26 DLD53_18035 PF00035 Double-stranded RNA binding motif DLD53_18035 PF14622 Ribonuclease-III-like DLD53_18040 PF01926 50S ribosome-binding GTPase DLD53_18040 PF07650 KH domain DLD53_18050 PF02565 Recombination protein O C terminal DLD53_18050 PF11967 Recombination protein O N terminal DLD53_18055 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DLD53_18060 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DLD53_18065 PF00106 short chain dehydrogenase DLD53_18105 PF17151 Periplasmic sensor domain DLD53_18105 PF00990 Diguanylate cyclase, GGDEF domain DLD53_18115 PF17757 UvrB interaction domain DLD53_18115 PF02151 UvrB/uvrC motif DLD53_18115 PF12344 Ultra-violet resistance protein B DLD53_18115 PF00271 Helicase conserved C-terminal domain DLD53_18115 PF04851 Type III restriction enzyme, res subunit DLD53_18125 PF00892 EamA-like transporter family DLD53_18130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLD53_18130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DLD53_18145 PF01018 GTP1/OBG DLD53_18145 PF01926 50S ribosome-binding GTPase DLD53_18150 PF01472 PUA domain DLD53_18150 PF00696 Amino acid kinase family DLD53_18160 PF07759 Protein of unknown function (DUF1615) DLD53_18165 PF01207 Dihydrouridine synthase (Dus) DLD53_18170 PF03060 Nitronate monooxygenase DLD53_18185 PF02350 UDP-N-acetylglucosamine 2-epimerase DLD53_18215 PF00875 DNA photolyase DLD53_18215 PF03441 FAD binding domain of DNA photolyase DLD53_18220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLD53_18225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_18230 PF07943 Penicillin-binding protein 5, C-terminal domain DLD53_18230 PF00768 D-alanyl-D-alanine carboxypeptidase DLD53_18240 PF03971 Monomeric isocitrate dehydrogenase DLD53_18245 PF00849 RNA pseudouridylate synthase DLD53_18250 PF00180 Isocitrate/isopropylmalate dehydrogenase DLD53_18270 PF06779 Uncharacterised MFS-type transporter YbfB DLD53_18275 PF03466 LysR substrate binding domain DLD53_18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_18285 PF02567 Phenazine biosynthesis-like protein DLD53_18290 PF00675 Insulinase (Peptidase family M16) DLD53_18290 PF05193 Peptidase M16 inactive domain DLD53_18315 PF02581 Thiamine monophosphate synthase DLD53_18320 PF00202 Aminotransferase class-III DLD53_18330 PF00849 RNA pseudouridylate synthase DLD53_18335 PF18337 RapA N-terminal Tudor like domain DLD53_18335 PF12137 RNA polymerase recycling family C-terminal DLD53_18335 PF00271 Helicase conserved C-terminal domain DLD53_18335 PF00176 SNF2 family N-terminal domain DLD53_18335 PF18339 RapA N-terminal Tudor like domain 1 DLD53_18345 PF00440 Bacterial regulatory proteins, tetR family DLD53_18350 PF00970 Oxidoreductase FAD-binding domain DLD53_18350 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_18350 PF00175 Oxidoreductase NAD-binding domain DLD53_18355 PF00487 Fatty acid desaturase DLD53_18365 PF00440 Bacterial regulatory proteins, tetR family DLD53_18365 PF17754 MftR C-terminal domain DLD53_18375 PF00202 Aminotransferase class-III DLD53_18380 PF00282 Pyridoxal-dependent decarboxylase conserved domain DLD53_18385 PF00171 Aldehyde dehydrogenase family DLD53_18390 PF01037 Lrp/AsnC ligand binding domain DLD53_18395 PF00205 Thiamine pyrophosphate enzyme, central domain DLD53_18395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLD53_18395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLD53_18400 PF00324 Amino acid permease DLD53_18405 PF12849 PBP superfamily domain DLD53_18410 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_18415 PF00528 Binding-protein-dependent transport system inner membrane component DLD53_18420 PF00005 ABC transporter DLD53_18425 PF01343 Peptidase family S49 DLD53_18425 PF08496 Peptidase family S49 N-terminal DLD53_18440 PF08328 Adenylosuccinate lyase C-terminal DLD53_18440 PF00206 Lyase DLD53_18445 PF04356 Protein of unknown function (DUF489) DLD53_18455 PF13344 Haloacid dehalogenase-like hydrolase DLD53_18455 PF00293 NUDIX domain DLD53_18460 PF00132 Bacterial transferase hexapeptide (six repeats) DLD53_18465 PF07943 Penicillin-binding protein 5, C-terminal domain DLD53_18465 PF00768 D-alanyl-D-alanine carboxypeptidase DLD53_18480 PF01975 Survival protein SurE DLD53_18485 PF01476 LysM domain DLD53_18485 PF01551 Peptidase family M23 DLD53_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLD53_18490 PF03466 LysR substrate binding domain DLD53_18495 PF13654 AAA domain DLD53_18495 PF05362 Lon protease (S16) C-terminal proteolytic domain DLD53_18500 PF07690 Major Facilitator Superfamily DLD53_18505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DLD53_18510 PF13593 SBF-like CPA transporter family (DUF4137) DLD53_18515 PF01197 Ribosomal protein L31 DLD53_18530 PF04055 Radical SAM superfamily DLD53_18535 PF09285 Elongation factor P, C-terminal DLD53_18535 PF08207 Elongation factor P (EF-P) KOW-like domain DLD53_18535 PF01132 Elongation factor P (EF-P) OB domain DLD53_18540 PF02554 Carbon starvation protein CstA DLD53_18540 PF13722 5TM C-terminal transporter carbon starvation CstA DLD53_18545 PF04328 Selenoprotein, putative DLD53_18660 PF14528 LAGLIDADG-like domain DLD53_18660 PF00772 DnaB-like helicase N terminal domain DLD53_18660 PF03796 DnaB-like helicase C terminal domain DLD53_18915 PF00817 impB/mucB/samB family DLD53_18915 PF11798 IMS family HHH motif DLD53_18915 PF13438 Domain of unknown function (DUF4113) DLD53_18915 PF11799 impB/mucB/samB family C-terminal domain DLD53_18945 PF06018 CodY GAF-like domain DLD53_18945 PF17853 GGDEF-like domain DLD53_18945 PF13556 PucR C-terminal helix-turn-helix domain DLD53_18960 PF00171 Aldehyde dehydrogenase family DLD53_18965 PF00324 Amino acid permease DLD53_18985 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_18990 PF02028 BCCT, betaine/carnitine/choline family transporter DLD53_18995 PF00355 Rieske [2Fe-2S] domain DLD53_18995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DLD53_19005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLD53_19005 PF18113 Rubredoxin binding C-terminal domain DLD53_19010 PF01266 FAD dependent oxidoreductase DLD53_19010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DLD53_19035 PF13936 Helix-turn-helix domain DLD53_19035 PF00665 Integrase core domain DLD53_19050 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DLD53_19055 PF00083 Sugar (and other) transporter DLD53_19060 PF13378 Enolase C-terminal domain-like DLD53_19060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DLD53_19065 PF00698 Acyl transferase domain DLD53_19065 PF08240 Alcohol dehydrogenase GroES-like domain DLD53_19065 PF08990 Erythronolide synthase docking DLD53_19065 PF09277 Erythronolide synthase, docking DLD53_19065 PF16197 Ketoacyl-synthetase C-terminal extension DLD53_19065 PF02801 Beta-ketoacyl synthase, C-terminal domain DLD53_19065 PF08659 KR domain DLD53_19065 PF00550 Phosphopantetheine attachment site DLD53_19065 PF00109 Beta-ketoacyl synthase, N-terminal domain DLD53_19065 PF14765 Polyketide synthase dehydratase DLD53_19070 PF00440 Bacterial regulatory proteins, tetR family DLD53_19090 PF17954 Quercetinase C-terminal cupin domain DLD53_19090 PF02678 Pirin DLD53_19100 PF13309 HTH domain DLD53_19100 PF08348 YheO-like PAS domain DLD53_19110 PF13193 AMP-binding enzyme C-terminal domain DLD53_19110 PF00501 AMP-binding enzyme DLD53_19110 PF00668 Condensation domain DLD53_19110 PF00550 Phosphopantetheine attachment site DLD53_19115 PF13193 AMP-binding enzyme C-terminal domain DLD53_19115 PF00501 AMP-binding enzyme DLD53_19115 PF00668 Condensation domain DLD53_19115 PF00975 Thioesterase domain DLD53_19115 PF00550 Phosphopantetheine attachment site DLD53_19120 PF01032 FecCD transport family DLD53_19125 PF01032 FecCD transport family DLD53_19130 PF00005 ABC transporter DLD53_19135 PF01497 Periplasmic binding protein DLD53_19140 PF07715 TonB-dependent Receptor Plug Domain DLD53_19140 PF00593 TonB dependent receptor DLD53_19145 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DLD53_19150 PF00501 AMP-binding enzyme DLD53_19150 PF00550 Phosphopantetheine attachment site DLD53_19150 PF00668 Condensation domain DLD53_19155 PF00501 AMP-binding enzyme DLD53_19155 PF13193 AMP-binding enzyme C-terminal domain DLD53_19160 PF00857 Isochorismatase family DLD53_19160 PF00550 Phosphopantetheine attachment site DLD53_19165 PF00282 Pyridoxal-dependent decarboxylase conserved domain DLD53_19175 PF00005 ABC transporter DLD53_19175 PF00664 ABC transporter transmembrane region DLD53_19180 PF00005 ABC transporter DLD53_19180 PF00664 ABC transporter transmembrane region DLD53_19185 PF00975 Thioesterase domain DLD53_19195 PF00425 chorismate binding enzyme DLD53_19205 PF01208 Uroporphyrinogen decarboxylase (URO-D) DLD53_19210 PF05675 Protein of unknown function (DUF817) DLD53_19225 PF00144 Beta-lactamase DLD53_19240 PF01799 [2Fe-2S] binding domain DLD53_19240 PF00111 2Fe-2S iron-sulfur cluster binding domain DLD53_19245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DLD53_19245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DLD53_19260 PF00218 Indole-3-glycerol phosphate synthase DLD53_19265 PF00591 Glycosyl transferase family, a/b domain DLD53_19265 PF02885 Glycosyl transferase family, helical bundle domain DLD53_19270 PF00593 TonB dependent receptor DLD53_19270 PF07715 TonB-dependent Receptor Plug Domain DLD53_19275 PF11838 ERAP1-like C-terminal domain DLD53_19275 PF01433 Peptidase family M1 domain DLD53_19280 PF00117 Glutamine amidotransferase class-I DLD53_19360 PF01381 Helix-turn-helix DLD53_19525 PF01807 CHC2 zinc finger DLD53_19525 PF08275 DNA primase catalytic core, N-terminal domain DLD53_19525 PF10410 DnaB-helicase binding domain of primase DLD53_19565 PF00625 Guanylate kinase DLD53_19590 PF02899 Phage integrase, N-terminal SAM-like domain DLD53_19590 PF00589 Phage integrase family DLD53_19625 PF07733 Bacterial DNA polymerase III alpha NTPase domain DLD53_19625 PF14579 Helix-hairpin-helix motif DLD53_19625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DLD53_19625 PF02811 PHP domain DLD53_19645 PF00154 recA bacterial DNA recombination protein DLD53_19690 PF13476 AAA domain DLD53_19720 PF03477 ATP cone domain DLD53_19720 PF00317 Ribonucleotide reductase, all-alpha domain DLD53_19720 PF02867 Ribonucleotide reductase, barrel domain DLD53_19725 PF00268 Ribonucleotide reductase, small chain DLD53_19750 PF00692 dUTPase DLD53_19850 PF00929 Exonuclease DLD53_19995 PF02195 ParB-like nuclease domain DLD53_20000 PF09383 NIL domain DLD53_20000 PF00005 ABC transporter DLD53_20110 PF00877 NlpC/P60 family DLD53_20170 PF00565 Staphylococcal nuclease homologue DLD53_20175 PF00816 H-NS histone family DLD53_20230 PF13614 AAA domain DLD53_20235 PF17762 HTH domain found in ParB protein DLD53_20235 PF02195 ParB-like nuclease domain DLD53_20255 PF05816 Toxic anion resistance protein (TelA) DLD53_20270 PF13936 Helix-turn-helix domain DLD53_20270 PF00665 Integrase core domain DLD53_20275 PF01636 Phosphotransferase enzyme family DLD53_20280 PF00665 Integrase core domain DLD53_20280 PF13936 Helix-turn-helix domain DLD53_20365 PF00684 DnaJ central domain DLD53_20365 PF01556 DnaJ C terminal domain DLD53_20365 PF00226 DnaJ domain DLD53_20400 PF18272 single-stranded DNA binding TraI N-terminal subdomain DLD53_20400 PF07057 DNA helicase TraI DLD53_20400 PF18340 DNA relaxase TraI 2B/2B-like domain DLD53_20400 PF08751 TrwC relaxase DLD53_20420 PF13936 Helix-turn-helix domain DLD53_20420 PF00665 Integrase core domain DLD53_20445 PF02796 Helix-turn-helix domain of resolvase DLD53_20445 PF00239 Resolvase, N terminal domain DLD53_20460 PF01464 Transglycosylase SLT domain DLD53_20495 PF13098 Thioredoxin-like domain DLD53_20495 PF10411 Disulfide bond isomerase protein N-terminus DLD53_20530 PF06834 TraU protein DLD53_20540 PF06986 Type-1V conjugative transfer system mating pair stabilisation DLD53_20555 PF06122 Conjugative relaxosome accessory transposon protein DLD53_20575 PF11799 impB/mucB/samB family C-terminal domain DLD53_20575 PF00817 impB/mucB/samB family DLD53_20575 PF13438 Domain of unknown function (DUF4113) DLD53_20575 PF11798 IMS family HHH motif DLD53_20640 PF03389 MobA/MobL family DLD53_20670 PF07715 TonB-dependent Receptor Plug Domain DLD53_20670 PF00593 TonB dependent receptor DLD53_20695 PF01051 Initiator Replication protein