locus-tag class description KJA61_00005 PF00308 Bacterial dnaA protein KJA61_00005 PF08299 Bacterial dnaA protein helix-turn-helix KJA61_00005 PF11638 DnaA N-terminal domain KJA61_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KJA61_00010 PF02767 DNA polymerase III beta subunit, central domain KJA61_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KJA61_00015 PF02463 RecF/RecN/SMC N terminal domain KJA61_00020 PF00204 DNA gyrase B KJA61_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KJA61_00020 PF18053 DNA gyrase B subunit insert domain KJA61_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_00020 PF01751 Toprim domain KJA61_00030 PF09335 SNARE associated Golgi protein KJA61_00035 PF00005 ABC transporter KJA61_00035 PF12848 ABC transporter KJA61_00055 PF01521 Iron-sulphur cluster biosynthesis KJA61_00060 PF00561 alpha/beta hydrolase fold KJA61_00065 PF03702 Anhydro-N-acetylmuramic acid kinase KJA61_00070 PF00579 tRNA synthetases class I (W and Y) KJA61_00110 PF00209 Sodium:neurotransmitter symporter family KJA61_00120 PF01189 16S rRNA methyltransferase RsmB/F KJA61_00120 PF01029 NusB family KJA61_00125 PF02911 Formyl transferase, C-terminal domain KJA61_00125 PF00551 Formyl transferase KJA61_00130 PF00920 Dehydratase family KJA61_00145 PF03466 LysR substrate binding domain KJA61_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_00150 PF00860 Permease family KJA61_00155 PF00311 Phosphoenolpyruvate carboxylase KJA61_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region KJA61_00160 PF00440 Bacterial regulatory proteins, tetR family KJA61_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_00170 PF00873 AcrB/AcrD/AcrF family KJA61_00180 PF00684 DnaJ central domain KJA61_00180 PF01556 DnaJ C terminal domain KJA61_00180 PF00226 DnaJ domain KJA61_00190 PF05173 Dihydrodipicolinate reductase, C-terminus KJA61_00190 PF01113 Dihydrodipicolinate reductase, N-terminus KJA61_00200 PF07690 Major Facilitator Superfamily KJA61_00205 PF00248 Aldo/keto reductase family KJA61_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_00210 PF03466 LysR substrate binding domain KJA61_00225 PF00392 Bacterial regulatory proteins, gntR family KJA61_00225 PF00155 Aminotransferase class I and II KJA61_00230 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_00230 PF00107 Zinc-binding dehydrogenase KJA61_00235 PF03352 Methyladenine glycosylase KJA61_00250 PF14815 NUDIX domain KJA61_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein KJA61_00250 PF00633 Helix-hairpin-helix motif KJA61_00250 PF10576 Iron-sulfur binding domain of endonuclease III KJA61_00265 PF07043 Protein of unknown function (DUF1328) KJA61_00270 PF03692 Putative zinc- or iron-chelating domain KJA61_00275 PF07995 Glucose / Sorbosone dehydrogenase KJA61_00280 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_00280 PF16193 AAA C-terminal domain KJA61_00280 PF12002 MgsA AAA+ ATPase C terminal KJA61_00285 PF01226 Formate/nitrite transporter KJA61_00295 PF01259 SAICAR synthetase KJA61_00305 PF00701 Dihydrodipicolinate synthetase family KJA61_00310 PF00857 Isochorismatase family KJA61_00315 PF01758 Sodium Bile acid symporter family KJA61_00320 PF01554 MatE KJA61_00325 PF04463 Protein of unknown function (DUF523) KJA61_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA61_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA61_00345 PF02798 Glutathione S-transferase, N-terminal domain KJA61_00345 PF14497 Glutathione S-transferase, C-terminal domain KJA61_00355 PF00324 Amino acid permease KJA61_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain KJA61_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain KJA61_00375 PF07702 UTRA domain KJA61_00375 PF00392 Bacterial regulatory proteins, gntR family KJA61_00380 PF05962 HutD KJA61_00385 PF17391 Urocanase N-terminal domain KJA61_00385 PF01175 Urocanase Rossmann-like domain KJA61_00385 PF17392 Urocanase C-terminal domain KJA61_00390 PF00221 Aromatic amino acid lyase KJA61_00395 PF00324 Amino acid permease KJA61_00400 PF01979 Amidohydrolase family KJA61_00405 PF00491 Arginase family KJA61_00420 PF01177 Asp/Glu/Hydantoin racemase KJA61_00425 PF01380 SIS domain KJA61_00430 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_00430 PF14602 Hexapeptide repeat of succinyl-transferase KJA61_00430 PF12804 MobA-like NTP transferase domain KJA61_00435 PF04608 Phosphatidylglycerophosphatase A KJA61_00440 PF02769 AIR synthase related protein, C-terminal domain KJA61_00440 PF00586 AIR synthase related protein, N-terminal domain KJA61_00445 PF01029 NusB family KJA61_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase KJA61_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KJA61_00455 PF00925 GTP cyclohydrolase II KJA61_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase KJA61_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KJA61_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KJA61_00490 PF00581 Rhodanese-like domain KJA61_00495 PF02666 Phosphatidylserine decarboxylase KJA61_00500 PF03069 Acetamidase/Formamidase family KJA61_00520 PF00512 His Kinase A (phospho-acceptor) domain KJA61_00520 PF00989 PAS fold KJA61_00520 PF11808 Phosphate regulon sensor protein PhoR KJA61_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_00525 PF00072 Response regulator receiver domain KJA61_00525 PF00486 Transcriptional regulatory protein, C terminal KJA61_00535 PF00106 short chain dehydrogenase KJA61_00540 PF01554 MatE KJA61_00545 PF00155 Aminotransferase class I and II KJA61_00550 PF04286 Protein of unknown function (DUF445) KJA61_00565 PF04262 Glutamate-cysteine ligase KJA61_00570 PF02600 Disulfide bond formation protein DsbB KJA61_00575 PF13296 Putative type VI secretion system Rhs element Vgr KJA61_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KJA61_00575 PF04717 Type VI secretion system, phage-baseplate injector KJA61_00580 PF00877 NlpC/P60 family KJA61_00580 PF01476 LysM domain KJA61_00595 PF05728 Uncharacterised protein family (UPF0227) KJA61_00600 PF01751 Toprim domain KJA61_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_00600 PF00986 DNA gyrase B subunit, carboxyl terminus KJA61_00600 PF00204 DNA gyrase B KJA61_00605 PF00106 short chain dehydrogenase KJA61_00610 PF04115 Ureidoglycolate lyase KJA61_00615 PF03561 Allantoicase repeat KJA61_00620 PF01494 FAD binding domain KJA61_00630 PF00860 Permease family KJA61_00635 PF00576 HIUase/Transthyretin family KJA61_00665 PF02683 Cytochrome C biogenesis protein transmembrane region KJA61_00665 PF11412 Disulphide bond corrector protein DsbC KJA61_00670 PF00990 Diguanylate cyclase, GGDEF domain KJA61_00670 PF07694 5TMR of 5TMR-LYT KJA61_00675 PF07859 alpha/beta hydrolase fold KJA61_00685 PF03960 ArsC family KJA61_00690 PF03372 Endonuclease/Exonuclease/phosphatase family KJA61_00695 PF00156 Phosphoribosyl transferase domain KJA61_00700 PF00593 TonB dependent receptor KJA61_00700 PF07715 TonB-dependent Receptor Plug Domain KJA61_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KJA61_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KJA61_00715 PF03033 Glycosyltransferase family 28 N-terminal domain KJA61_00715 PF04101 Glycosyltransferase family 28 C-terminal domain KJA61_00720 PF08245 Mur ligase middle domain KJA61_00720 PF02875 Mur ligase family, glutamate ligase domain KJA61_00720 PF01225 Mur ligase family, catalytic domain KJA61_00725 PF01820 D-ala D-ala ligase N-terminus KJA61_00725 PF07478 D-ala D-ala ligase C-terminus KJA61_00730 PF08478 POTRA domain, FtsQ-type KJA61_00730 PF03799 Cell division protein FtsQ KJA61_00735 PF02491 SHS2 domain inserted in FTSA KJA61_00740 PF00091 Tubulin/FtsZ family, GTPase domain KJA61_00740 PF12327 FtsZ family, C-terminal domain KJA61_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KJA61_00755 PF01551 Peptidase family M23 KJA61_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain KJA61_00760 PF00456 Transketolase, thiamine diphosphate binding domain KJA61_00765 PF02817 e3 binding domain KJA61_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA61_00765 PF00364 Biotin-requiring enzyme KJA61_00775 PF01169 Uncharacterized protein family UPF0016 KJA61_00785 PF13005 zinc-finger binding domain of transposase IS66 KJA61_00785 PF03050 Transposase IS66 family KJA61_00785 PF13817 IS66 C-terminal element KJA61_00785 PF13007 Transposase C of IS166 homeodomain KJA61_00805 PF01613 Flavin reductase like domain KJA61_00805 PF00258 Flavodoxin KJA61_00810 PF03692 Putative zinc- or iron-chelating domain KJA61_00815 PF00571 CBS domain KJA61_00815 PF00478 IMP dehydrogenase / GMP reductase domain KJA61_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA61_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA61_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA61_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA61_00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KJA61_00825 PF01243 Pyridoxamine 5'-phosphate oxidase KJA61_00830 PF02272 DHHA1 domain KJA61_00830 PF17768 RecJ OB domain KJA61_00830 PF01368 DHH family KJA61_00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KJA61_00860 PF04452 RNA methyltransferase KJA61_00865 PF00924 Mechanosensitive ion channel KJA61_00875 PF16177 Acetyl-coenzyme A synthetase N-terminus KJA61_00875 PF00501 AMP-binding enzyme KJA61_00875 PF13193 AMP-binding enzyme C-terminal domain KJA61_00880 PF00857 Isochorismatase family KJA61_00885 PF01037 Lrp/AsnC ligand binding domain KJA61_00890 PF00872 Transposase, Mutator family KJA61_00895 PF00296 Luciferase-like monooxygenase KJA61_00900 PF03358 NADPH-dependent FMN reductase KJA61_00905 PF00196 Bacterial regulatory proteins, luxR family KJA61_00905 PF00072 Response regulator receiver domain KJA61_00915 PF00672 HAMP domain KJA61_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_00915 PF01627 Hpt domain KJA61_00915 PF00072 Response regulator receiver domain KJA61_00915 PF00512 His Kinase A (phospho-acceptor) domain KJA61_00920 PF04341 Protein of unknown function, DUF485 KJA61_00925 PF00474 Sodium:solute symporter family KJA61_00940 PF00990 Diguanylate cyclase, GGDEF domain KJA61_00950 PF17760 UvrA interaction domain KJA61_00950 PF00005 ABC transporter KJA61_00950 PF17755 UvrA DNA-binding domain KJA61_00955 PF16925 Tetracyclin repressor-like, C-terminal domain KJA61_00955 PF00440 Bacterial regulatory proteins, tetR family KJA61_00960 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_00960 PF00107 Zinc-binding dehydrogenase KJA61_00970 PF06942 GlpM protein KJA61_00975 PF08543 Phosphomethylpyrimidine kinase KJA61_00975 PF03070 TENA/THI-4/PQQC family KJA61_00975 PF02581 Thiamine monophosphate synthase KJA61_00985 PF07690 Major Facilitator Superfamily KJA61_00990 PF00436 Single-strand binding protein family KJA61_01000 PF03591 AzlC protein KJA61_01010 PF00324 Amino acid permease KJA61_01015 PF00155 Aminotransferase class I and II KJA61_01015 PF00392 Bacterial regulatory proteins, gntR family KJA61_01020 PF00202 Aminotransferase class-III KJA61_01025 PF00171 Aldehyde dehydrogenase family KJA61_01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_01035 PF00857 Isochorismatase family KJA61_01040 PF02678 Pirin KJA61_01040 PF05726 Pirin C-terminal cupin domain KJA61_01060 PF10544 T5orf172 domain KJA61_01065 PF13614 AAA domain KJA61_01085 PF00905 Penicillin binding protein transpeptidase domain KJA61_01115 PF07690 Major Facilitator Superfamily KJA61_01120 PF03466 LysR substrate binding domain KJA61_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_01140 PF00248 Aldo/keto reductase family KJA61_01145 PF02311 AraC-like ligand binding domain KJA61_01145 PF12833 Helix-turn-helix domain KJA61_01175 PF01638 HxlR-like helix-turn-helix KJA61_01180 PF02525 Flavodoxin-like fold KJA61_01200 PF02705 K+ potassium transporter KJA61_01225 PF00230 Major intrinsic protein KJA61_01240 PF00977 Histidine biosynthesis protein KJA61_01245 PF01636 Phosphotransferase enzyme family KJA61_01260 PF03992 Antibiotic biosynthesis monooxygenase KJA61_01275 PF00977 Histidine biosynthesis protein KJA61_01290 PF00117 Glutamine amidotransferase class-I KJA61_01295 PF00475 Imidazoleglycerol-phosphate dehydratase KJA61_01315 PF00583 Acetyltransferase (GNAT) family KJA61_01320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KJA61_01320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KJA61_01330 PF00672 HAMP domain KJA61_01330 PF00512 His Kinase A (phospho-acceptor) domain KJA61_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_01335 PF00072 Response regulator receiver domain KJA61_01335 PF00486 Transcriptional regulatory protein, C terminal KJA61_01340 PF17674 HHH domain KJA61_01340 PF00575 S1 RNA binding domain KJA61_01340 PF09371 Tex-like protein N-terminal domain KJA61_01340 PF16921 Tex protein YqgF-like domain KJA61_01345 PF00916 Sulfate permease family KJA61_01345 PF01740 STAS domain KJA61_01350 PF00106 short chain dehydrogenase KJA61_01355 PF01053 Cys/Met metabolism PLP-dependent enzyme KJA61_01360 PF12848 ABC transporter KJA61_01360 PF00005 ABC transporter KJA61_01385 PF04191 Phospholipid methyltransferase KJA61_01405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_01405 PF00529 HlyD membrane-fusion protein of T1SS KJA61_01410 PF00873 AcrB/AcrD/AcrF family KJA61_01415 PF01545 Cation efflux family KJA61_01445 PF00324 Amino acid permease KJA61_01460 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA61_01475 PF01795 MraW methylase family KJA61_01485 PF03717 Penicillin-binding Protein dimerisation domain KJA61_01485 PF00905 Penicillin binding protein transpeptidase domain KJA61_01490 PF08245 Mur ligase middle domain KJA61_01490 PF02875 Mur ligase family, glutamate ligase domain KJA61_01490 PF01225 Mur ligase family, catalytic domain KJA61_01495 PF02875 Mur ligase family, glutamate ligase domain KJA61_01495 PF08245 Mur ligase middle domain KJA61_01495 PF01225 Mur ligase family, catalytic domain KJA61_01500 PF00953 Glycosyl transferase family 4 KJA61_01510 PF13847 Methyltransferase domain KJA61_01515 PF17092 Penicillin-binding protein OB-like domain KJA61_01515 PF00905 Penicillin binding protein transpeptidase domain KJA61_01515 PF00912 Transglycosylase KJA61_01520 PF11104 Type IV pilus assembly protein PilM; KJA61_01525 PF05137 Fimbrial assembly protein (PilN) KJA61_01530 PF04350 Pilus assembly protein, PilO KJA61_01540 PF07660 Secretin and TonB N terminus short domain KJA61_01540 PF03958 Bacterial type II/III secretion system short domain KJA61_01540 PF00263 Bacterial type II and III secretion system protein KJA61_01540 PF11741 AMIN domain KJA61_01545 PF01202 Shikimate kinase KJA61_01550 PF01761 3-dehydroquinate synthase KJA61_01560 PF01645 Conserved region in glutamate synthase KJA61_01560 PF04898 Glutamate synthase central domain KJA61_01560 PF01493 GXGXG motif KJA61_01560 PF00310 Glutamine amidotransferases class-II KJA61_01565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KJA61_01565 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_01575 PF04011 LemA family KJA61_01580 PF04536 TPM domain KJA61_01590 PF07963 Prokaryotic N-terminal methylation motif KJA61_01590 PF00114 Pilin (bacterial filament) KJA61_01600 PF11846 Virulence factor membrane-bound polymerase, C-terminal KJA61_01600 PF15864 Protein glycosylation ligase KJA61_01600 PF04932 O-Antigen ligase KJA61_01605 PF00210 Ferritin-like domain KJA61_01610 PF04324 BFD-like [2Fe-2S] binding domain KJA61_01615 PF01042 Endoribonuclease L-PSP KJA61_01620 PF02824 TGS domain KJA61_01620 PF04607 Region found in RelA / SpoT proteins KJA61_01620 PF13291 ACT domain KJA61_01630 PF01192 RNA polymerase Rpb6 KJA61_01635 PF00625 Guanylate kinase KJA61_01640 PF02401 LytB protein KJA61_01680 PF00886 Ribosomal protein S16 KJA61_01685 PF01782 RimM N-terminal domain KJA61_01685 PF05239 PRC-barrel domain KJA61_01690 PF01746 tRNA (Guanine-1)-methyltransferase KJA61_01695 PF01245 Ribosomal protein L19 KJA61_01700 PF00561 alpha/beta hydrolase fold KJA61_01705 PF03280 Proteobacterial lipase chaperone protein KJA61_01710 PF09157 Pseudouridine synthase II TruB, C-terminal KJA61_01710 PF16198 tRNA pseudouridylate synthase B C-terminal domain KJA61_01710 PF01509 TruB family pseudouridylate synthase (N terminal domain) KJA61_01715 PF01925 Sulfite exporter TauE/SafE KJA61_01725 PF00892 EamA-like transporter family KJA61_01730 PF00892 EamA-like transporter family KJA61_01735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA61_01735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA61_01740 PF01565 FAD binding domain KJA61_01740 PF02913 FAD linked oxidases, C-terminal domain KJA61_01750 PF03992 Antibiotic biosynthesis monooxygenase KJA61_01755 PF02525 Flavodoxin-like fold KJA61_01765 PF07690 Major Facilitator Superfamily KJA61_01770 PF12805 FUSC-like inner membrane protein yccS KJA61_01775 PF00080 Copper/zinc superoxide dismutase (SODC) KJA61_01780 PF01594 AI-2E family transporter KJA61_01785 PF13614 AAA domain KJA61_01815 PF00324 Amino acid permease KJA61_01820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KJA61_01820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KJA61_01825 PF00202 Aminotransferase class-III KJA61_01830 PF04958 Arginine N-succinyltransferase beta subunit KJA61_01835 PF00171 Aldehyde dehydrogenase family KJA61_01840 PF04996 Succinylarginine dihydrolase KJA61_01845 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KJA61_01860 PF05922 Peptidase inhibitor I9 KJA61_01860 PF00082 Subtilase family KJA61_01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_01875 PF03466 LysR substrate binding domain KJA61_01880 PF00892 EamA-like transporter family KJA61_01890 PF02092 Glycyl-tRNA synthetase beta subunit KJA61_01890 PF05746 DALR anticodon binding domain KJA61_01895 PF02091 Glycyl-tRNA synthetase alpha subunit KJA61_01920 PF00571 CBS domain KJA61_01925 PF04024 PspC domain KJA61_01935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_01935 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_01935 PF12806 Acetyl-CoA dehydrogenase C-terminal like KJA61_01935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_01945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KJA61_01945 PF08501 Shikimate dehydrogenase substrate binding domain KJA61_01945 PF01488 Shikimate / quinate 5-dehydrogenase KJA61_01950 PF01218 Coproporphyrinogen III oxidase KJA61_01955 PF00925 GTP cyclohydrolase II KJA61_01960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KJA61_01960 PF02779 Transketolase, pyrimidine binding domain KJA61_01960 PF02780 Transketolase, C-terminal domain KJA61_01965 PF00459 Inositol monophosphatase family KJA61_01970 PF03880 DbpA RNA binding domain KJA61_01970 PF00271 Helicase conserved C-terminal domain KJA61_01970 PF12343 Cold shock protein DEAD box A KJA61_01970 PF00270 DEAD/DEAH box helicase KJA61_01980 PF00005 ABC transporter KJA61_01985 PF02405 Permease MlaE KJA61_01995 PF05494 MlaC protein KJA61_02005 PF01544 CorA-like Mg2+ transporter protein KJA61_02010 PF03641 Possible lysine decarboxylase KJA61_02015 PF00293 NUDIX domain KJA61_02020 PF00156 Phosphoribosyl transferase domain KJA61_02025 PF17191 RecG wedge domain KJA61_02025 PF00270 DEAD/DEAH box helicase KJA61_02025 PF00271 Helicase conserved C-terminal domain KJA61_02040 PF01553 Acyltransferase KJA61_02050 PF00375 Sodium:dicarboxylate symporter family KJA61_02060 PF01926 50S ribosome-binding GTPase KJA61_02065 PF02082 Transcriptional regulator KJA61_02070 PF00175 Oxidoreductase NAD-binding domain KJA61_02070 PF00042 Globin KJA61_02070 PF00970 Oxidoreductase FAD-binding domain KJA61_02075 PF05872 Bacterial protein of unknown function (DUF853) KJA61_02080 PF01053 Cys/Met metabolism PLP-dependent enzyme KJA61_02085 PF00117 Glutamine amidotransferase class-I KJA61_02090 PF00338 Ribosomal protein S10p/S20e KJA61_02095 PF00297 Ribosomal protein L3 KJA61_02100 PF00573 Ribosomal protein L4/L1 family KJA61_02105 PF00276 Ribosomal protein L23 KJA61_02110 PF03947 Ribosomal Proteins L2, C-terminal domain KJA61_02110 PF00181 Ribosomal Proteins L2, RNA binding domain KJA61_02115 PF00203 Ribosomal protein S19 KJA61_02120 PF00237 Ribosomal protein L22p/L17e KJA61_02125 PF00189 Ribosomal protein S3, C-terminal domain KJA61_02125 PF07650 KH domain KJA61_02130 PF00252 Ribosomal protein L16p/L10e KJA61_02135 PF00831 Ribosomal L29 protein KJA61_02140 PF00366 Ribosomal protein S17 KJA61_02145 PF00238 Ribosomal protein L14p/L23e KJA61_02150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KJA61_02150 PF00467 KOW motif KJA61_02155 PF00281 Ribosomal protein L5 KJA61_02155 PF00673 ribosomal L5P family C-terminus KJA61_02160 PF00253 Ribosomal protein S14p/S29e KJA61_02165 PF00410 Ribosomal protein S8 KJA61_02170 PF00347 Ribosomal protein L6 KJA61_02175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KJA61_02180 PF00333 Ribosomal protein S5, N-terminal domain KJA61_02180 PF03719 Ribosomal protein S5, C-terminal domain KJA61_02185 PF00327 Ribosomal protein L30p/L7e KJA61_02190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KJA61_02195 PF00344 SecY translocase KJA61_02200 PF00444 Ribosomal protein L36 KJA61_02205 PF00416 Ribosomal protein S13/S18 KJA61_02210 PF00411 Ribosomal protein S11 KJA61_02215 PF01479 S4 domain KJA61_02215 PF00163 Ribosomal protein S4/S9 N-terminal domain KJA61_02220 PF01000 RNA polymerase Rpb3/RpoA insert domain KJA61_02220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KJA61_02220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KJA61_02225 PF01196 Ribosomal protein L17 KJA61_02230 PF00743 Flavin-binding monooxygenase-like KJA61_02235 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_02240 PF03937 Flavinator of succinate dehydrogenase KJA61_02270 PF09526 Probable metal-binding protein (DUF2387) KJA61_02275 PF01432 Peptidase family M3 KJA61_02280 PF08461 Ribonuclease R winged-helix domain KJA61_02280 PF08206 Ribonuclease B OB domain KJA61_02280 PF00773 RNB domain KJA61_02280 PF00575 S1 RNA binding domain KJA61_02280 PF17876 Cold shock domain KJA61_02325 PF01557 Fumarylacetoacetate (FAA) hydrolase family KJA61_02330 PF12833 Helix-turn-helix domain KJA61_02335 PF00892 EamA-like transporter family KJA61_02340 PF03631 Virulence factor BrkB KJA61_02345 PF03358 NADPH-dependent FMN reductase KJA61_02370 PF02130 Uncharacterized protein family UPF0054 KJA61_02375 PF02562 PhoH-like protein KJA61_02380 PF04055 Radical SAM superfamily KJA61_02380 PF01938 TRAM domain KJA61_02380 PF00919 Uncharacterized protein family UPF0004 KJA61_02385 PF01551 Peptidase family M23 KJA61_02385 PF10145 Phage-related minor tail protein KJA61_02385 PF01464 Transglycosylase SLT domain KJA61_02395 PF00056 lactate/malate dehydrogenase, NAD binding domain KJA61_02395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KJA61_02415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KJA61_02420 PF01066 CDP-alcohol phosphatidyltransferase KJA61_02465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_02465 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_02465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_02470 PF17932 Tetracyclin repressor-like, C-terminal domain KJA61_02470 PF00440 Bacterial regulatory proteins, tetR family KJA61_02485 PF01039 Carboxyl transferase domain KJA61_02490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_02490 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_02490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_02500 PF02785 Biotin carboxylase C-terminal domain KJA61_02500 PF00364 Biotin-requiring enzyme KJA61_02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_02500 PF00289 Biotin carboxylase, N-terminal domain KJA61_02510 PF04386 Stringent starvation protein B KJA61_02515 PF13417 Glutathione S-transferase, N-terminal domain KJA61_02515 PF00043 Glutathione S-transferase, C-terminal domain KJA61_02520 PF00380 Ribosomal protein S9/S16 KJA61_02525 PF00572 Ribosomal protein L13 KJA61_02530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KJA61_02535 PF00398 Ribosomal RNA adenine dimethylase KJA61_02540 PF00149 Calcineurin-like phosphoesterase KJA61_02560 PF01926 50S ribosome-binding GTPase KJA61_02560 PF16360 GTP-binding GTPase Middle Region KJA61_02560 PF13167 GTP-binding GTPase N-terminal KJA61_02570 PF13091 PLD-like domain KJA61_02575 PF10518 TAT (twin-arginine translocation) pathway signal sequence KJA61_02575 PF00149 Calcineurin-like phosphoesterase KJA61_02580 PF00691 OmpA family KJA61_02580 PF01389 OmpA-like transmembrane domain KJA61_02585 PF17152 Periplasmic sensor domain KJA61_02585 PF00990 Diguanylate cyclase, GGDEF domain KJA61_02620 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_02620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA61_02630 PF04273 Putative phosphatase (DUF442) KJA61_02630 PF00753 Metallo-beta-lactamase superfamily KJA61_02635 PF00561 alpha/beta hydrolase fold KJA61_02640 PF00085 Thioredoxin KJA61_02645 PF03061 Thioesterase superfamily KJA61_02655 PF04461 Protein of unknown function (DUF520) KJA61_02665 PF01266 FAD dependent oxidoreductase KJA61_02665 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KJA61_02675 PF03795 YCII-related domain KJA61_02680 PF04279 Intracellular septation protein A KJA61_02685 PF02811 PHP domain KJA61_02690 PF01062 Bestrophin, RFP-TM, chloride channel KJA61_02695 PF04002 RadC-like JAB domain KJA61_02700 PF04127 DNA / pantothenate metabolism flavoprotein KJA61_02700 PF02441 Flavoprotein KJA61_02705 PF07549 SecD/SecF GG Motif KJA61_02705 PF02355 Protein export membrane protein KJA61_02710 PF07549 SecD/SecF GG Motif KJA61_02710 PF13721 SecD export protein N-terminal TM region KJA61_02710 PF02355 Protein export membrane protein KJA61_02715 PF02699 Preprotein translocase subunit KJA61_02720 PF01702 Queuine tRNA-ribosyltransferase KJA61_02735 PF02547 Queuosine biosynthesis protein KJA61_02760 PF07689 KaiB domain KJA61_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_02760 PF00512 His Kinase A (phospho-acceptor) domain KJA61_02765 PF08335 GlnD PII-uridylyltransferase KJA61_02765 PF03710 Glutamate-ammonia ligase adenylyltransferase KJA61_02770 PF01063 Amino-transferase class IV KJA61_02785 PF01522 Polysaccharide deacetylase KJA61_02790 PF00535 Glycosyl transferase family 2 KJA61_02795 PF13439 Glycosyltransferase Family 4 KJA61_02795 PF00534 Glycosyl transferases group 1 KJA61_02820 PF17101 Stealth protein CR1, conserved region 1 KJA61_02820 PF11380 Stealth protein CR2, conserved region 2 KJA61_02820 PF17102 Stealth protein CR3, conserved region 3 KJA61_02825 PF02938 GAD domain KJA61_02825 PF00152 tRNA synthetases class II (D, K and N) KJA61_02825 PF01336 OB-fold nucleic acid binding domain KJA61_02835 PF00593 TonB dependent receptor KJA61_02835 PF07715 TonB-dependent Receptor Plug Domain KJA61_02855 PF06146 Phosphate-starvation-inducible E KJA61_02860 PF02798 Glutathione S-transferase, N-terminal domain KJA61_02860 PF00043 Glutathione S-transferase, C-terminal domain KJA61_02865 PF03466 LysR substrate binding domain KJA61_02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_02870 PF12806 Acetyl-CoA dehydrogenase C-terminal like KJA61_02870 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_02870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_02875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_02875 PF12806 Acetyl-CoA dehydrogenase C-terminal like KJA61_02875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_02875 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_02885 PF00672 HAMP domain KJA61_02885 PF00512 His Kinase A (phospho-acceptor) domain KJA61_02890 PF00072 Response regulator receiver domain KJA61_02890 PF00486 Transcriptional regulatory protein, C terminal KJA61_02895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KJA61_02915 PF01923 Cobalamin adenosyltransferase KJA61_02920 PF00593 TonB dependent receptor KJA61_02920 PF07715 TonB-dependent Receptor Plug Domain KJA61_02925 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KJA61_02930 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_02955 PF00290 Tryptophan synthase alpha chain KJA61_02960 PF01039 Carboxyl transferase domain KJA61_02965 PF02875 Mur ligase family, glutamate ligase domain KJA61_02965 PF08245 Mur ligase middle domain KJA61_02980 PF00753 Metallo-beta-lactamase superfamily KJA61_02985 PF10417 C-terminal domain of 1-Cys peroxiredoxin KJA61_02985 PF00578 AhpC/TSA family KJA61_02990 PF02810 SEC-C motif KJA61_02990 PF07517 SecA DEAD-like domain KJA61_02990 PF01043 SecA preprotein cross-linking domain KJA61_02990 PF07516 SecA Wing and Scaffold domain KJA61_03000 PF07690 Major Facilitator Superfamily KJA61_03000 PF00083 Sugar (and other) transporter KJA61_03005 PF03006 Haemolysin-III related KJA61_03030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA61_03030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA61_03030 PF00378 Enoyl-CoA hydratase/isomerase KJA61_03035 PF02803 Thiolase, C-terminal domain KJA61_03035 PF00108 Thiolase, N-terminal domain KJA61_03040 PF02311 AraC-like ligand binding domain KJA61_03040 PF12833 Helix-turn-helix domain KJA61_03045 PF02515 CoA-transferase family III KJA61_03050 PF04966 Carbohydrate-selective porin, OprB family KJA61_03055 PF01011 PQQ enzyme repeat KJA61_03060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KJA61_03060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KJA61_03070 PF00893 Small Multidrug Resistance protein KJA61_03080 PF00108 Thiolase, N-terminal domain KJA61_03080 PF02803 Thiolase, C-terminal domain KJA61_03090 PF00691 OmpA family KJA61_03090 PF13505 Outer membrane protein beta-barrel domain KJA61_03100 PF01139 tRNA-splicing ligase RtcB KJA61_03105 PF00324 Amino acid permease KJA61_03110 PF05175 Methyltransferase small domain KJA61_03110 PF08468 Methyltransferase small domain N-terminal KJA61_03115 PF00860 Permease family KJA61_03120 PF00679 Elongation factor G C-terminus KJA61_03120 PF00009 Elongation factor Tu GTP binding domain KJA61_03120 PF03144 Elongation factor Tu domain 2 KJA61_03125 PF01741 Large-conductance mechanosensitive channel, MscL KJA61_03140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KJA61_03140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KJA61_03140 PF06827 Zinc finger found in FPG and IleRS KJA61_03145 PF02245 Methylpurine-DNA glycosylase (MPG) KJA61_03150 PF00593 TonB dependent receptor KJA61_03150 PF07715 TonB-dependent Receptor Plug Domain KJA61_03165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_03180 PF13098 Thioredoxin-like domain KJA61_03180 PF10411 Disulfide bond isomerase protein N-terminus KJA61_03185 PF01571 Aminomethyltransferase folate-binding domain KJA61_03195 PF04343 Protein of unknown function, DUF488 KJA61_03200 PF03831 PhnA domain KJA61_03200 PF08274 PhnA Zinc-Ribbon KJA61_03205 PF07411 Domain of unknown function (DUF1508) KJA61_03210 PF03129 Anticodon binding domain KJA61_03210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA61_03210 PF04073 Aminoacyl-tRNA editing domain KJA61_03215 PF00873 AcrB/AcrD/AcrF family KJA61_03230 PF00072 Response regulator receiver domain KJA61_03235 PF00072 Response regulator receiver domain KJA61_03240 PF01584 CheW-like domain KJA61_03245 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KJA61_03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KJA61_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_03250 PF01584 CheW-like domain KJA61_03250 PF01627 Hpt domain KJA61_03250 PF00072 Response regulator receiver domain KJA61_03260 PF07687 Peptidase dimerisation domain KJA61_03260 PF01546 Peptidase family M20/M25/M40 KJA61_03265 PF08085 Entericidin EcnA/B family KJA61_03275 PF04304 Protein of unknown function (DUF454) KJA61_03280 PF03734 L,D-transpeptidase catalytic domain KJA61_03280 PF17969 L,D-transpeptidase C-terminal domain KJA61_03320 PF00175 Oxidoreductase NAD-binding domain KJA61_03320 PF00258 Flavodoxin KJA61_03320 PF00667 FAD binding domain KJA61_03330 PF12805 FUSC-like inner membrane protein yccS KJA61_03335 PF07690 Major Facilitator Superfamily KJA61_03340 PF00881 Nitroreductase family KJA61_03355 PF01235 Sodium:alanine symporter family KJA61_03360 PF01734 Patatin-like phospholipase KJA61_03365 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_03365 PF13291 ACT domain KJA61_03370 PF05992 SbmA/BacA-like family KJA61_03400 PF02934 GatB/GatE catalytic domain KJA61_03400 PF02637 GatB domain KJA61_03405 PF01425 Amidase KJA61_03410 PF02686 Glu-tRNAGln amidotransferase C subunit KJA61_03420 PF04085 rod shape-determining protein MreC KJA61_03425 PF04093 rod shape-determining protein MreD KJA61_03430 PF02545 Maf-like protein KJA61_03435 PF00575 S1 RNA binding domain KJA61_03435 PF10150 Ribonuclease E/G family KJA61_03445 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KJA61_03445 PF06974 Protein of unknown function (DUF1298) KJA61_03450 PF01507 Phosphoadenosine phosphosulfate reductase family KJA61_03465 PF02525 Flavodoxin-like fold KJA61_03485 PF02673 Bacitracin resistance protein BacA KJA61_03490 PF06719 AraC-type transcriptional regulator N-terminus KJA61_03490 PF12833 Helix-turn-helix domain KJA61_03495 PF14765 Polyketide synthase dehydratase KJA61_03495 PF00550 Phosphopantetheine attachment site KJA61_03495 PF08659 KR domain KJA61_03495 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_03495 PF16197 Ketoacyl-synthetase C-terminal extension KJA61_03495 PF08990 Erythronolide synthase docking KJA61_03495 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_03495 PF00698 Acyl transferase domain KJA61_03495 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_03495 PF09277 Erythronolide synthase, docking KJA61_03500 PF01965 DJ-1/PfpI family KJA61_03510 PF00324 Amino acid permease KJA61_03515 PF04303 PrpF protein KJA61_03520 PF00348 Polyprenyl synthetase KJA61_03525 PF04237 YjbR KJA61_03530 PF01145 SPFH domain / Band 7 family KJA61_03540 PF01734 Patatin-like phospholipase KJA61_03870 PF08019 Phosphoethanolamine transferase EptA/EptB KJA61_03870 PF00884 Sulfatase KJA61_03875 PF00072 Response regulator receiver domain KJA61_03875 PF00486 Transcriptional regulatory protein, C terminal KJA61_03880 PF08521 Two-component sensor kinase N-terminal KJA61_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_03880 PF00512 His Kinase A (phospho-acceptor) domain KJA61_03890 PF00909 Ammonium Transporter Family KJA61_03895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_03895 PF03466 LysR substrate binding domain KJA61_03915 PF00133 tRNA synthetases class I (I, L, M and V) KJA61_03915 PF08264 Anticodon-binding domain of tRNA KJA61_03915 PF10458 Valyl tRNA synthetase tRNA binding arm KJA61_03935 PF01906 Putative heavy-metal-binding KJA61_03940 PF01906 Putative heavy-metal-binding KJA61_03945 PF02321 Outer membrane efflux protein KJA61_03950 PF00873 AcrB/AcrD/AcrF family KJA61_03955 PF00529 HlyD membrane-fusion protein of T1SS KJA61_03955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_03960 PF01569 PAP2 superfamily KJA61_03970 PF00348 Polyprenyl synthetase KJA61_03980 PF00829 Ribosomal prokaryotic L21 protein KJA61_03985 PF01016 Ribosomal L27 protein KJA61_03990 PF03548 Outer membrane lipoprotein carrier protein LolA KJA61_04000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA61_04000 PF02403 Seryl-tRNA synthetase N-terminal domain KJA61_04005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJA61_04005 PF10414 Sirohaem synthase dimerisation region KJA61_04005 PF14824 Sirohaem biosynthesis protein central KJA61_04010 PF00588 SpoU rRNA Methylase family KJA61_04015 PF01638 HxlR-like helix-turn-helix KJA61_04020 PF03358 NADPH-dependent FMN reductase KJA61_04025 PF13520 Amino acid permease KJA61_04030 PF00465 Iron-containing alcohol dehydrogenase KJA61_04040 PF03099 Biotin/lipoate A/B protein ligase family KJA61_04045 PF04359 Protein of unknown function (DUF493) KJA61_04050 PF04546 Sigma-70, non-essential region KJA61_04050 PF03979 Sigma-70 factor, region 1.1 KJA61_04050 PF00140 Sigma-70 factor, region 1.2 KJA61_04050 PF04542 Sigma-70 region 2 KJA61_04050 PF04539 Sigma-70 region 3 KJA61_04050 PF04545 Sigma-70, region 4 KJA61_04070 PF17773 UPF0176 acylphosphatase like domain KJA61_04070 PF00581 Rhodanese-like domain KJA61_04080 PF00285 Citrate synthase, C-terminal domain KJA61_04085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KJA61_04090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KJA61_04095 PF00890 FAD binding domain KJA61_04095 PF02910 Fumarate reductase flavoprotein C-term KJA61_04100 PF13085 2Fe-2S iron-sulfur cluster binding domain KJA61_04115 PF16078 2-oxoglutarate dehydrogenase N-terminus KJA61_04115 PF00676 Dehydrogenase E1 component KJA61_04115 PF16870 2-oxoglutarate dehydrogenase C-terminal KJA61_04115 PF02779 Transketolase, pyrimidine binding domain KJA61_04120 PF00364 Biotin-requiring enzyme KJA61_04120 PF02817 e3 binding domain KJA61_04120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA61_04125 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_04125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA61_04130 PF08442 ATP-grasp domain KJA61_04130 PF00549 CoA-ligase KJA61_04135 PF00549 CoA-ligase KJA61_04135 PF02629 CoA binding domain KJA61_04140 PF00579 tRNA synthetases class I (W and Y) KJA61_04145 PF05661 Protein of unknown function (DUF808) KJA61_04150 PF04228 Putative neutral zinc metallopeptidase KJA61_04155 PF00999 Sodium/hydrogen exchanger family KJA61_04190 PF09587 Bacterial capsule synthesis protein PGA_cap KJA61_04200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJA61_04205 PF00582 Universal stress protein family KJA61_04210 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_04215 PF01272 Transcription elongation factor, GreA/GreB, C-term KJA61_04215 PF03449 Transcription elongation factor, N-terminal KJA61_04220 PF02142 MGS-like domain KJA61_04220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_04220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KJA61_04225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KJA61_04225 PF00117 Glutamine amidotransferase class-I KJA61_04240 PF01985 CRS1 / YhbY (CRM) domain KJA61_04245 PF01728 FtsJ-like methyltransferase KJA61_04250 PF17862 AAA+ lid domain KJA61_04250 PF06480 FtsH Extracellular KJA61_04250 PF01434 Peptidase family M41 KJA61_04250 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_04255 PF00809 Pterin binding enzyme KJA61_04275 PF09423 PhoD-like phosphatase KJA61_04275 PF16655 PhoD-like phosphatase, N-terminal domain KJA61_04290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KJA61_04290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KJA61_04305 PF00083 Sugar (and other) transporter KJA61_04310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KJA61_04310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KJA61_04315 PF01266 FAD dependent oxidoreductase KJA61_04315 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KJA61_04320 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KJA61_04320 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KJA61_04325 PF00781 Diacylglycerol kinase catalytic domain KJA61_04330 PF00149 Calcineurin-like phosphoesterase KJA61_04340 PF00166 Chaperonin 10 Kd subunit KJA61_04345 PF00118 TCP-1/cpn60 chaperonin family KJA61_04350 PF01219 Prokaryotic diacylglycerol kinase KJA61_04355 PF00753 Metallo-beta-lactamase superfamily KJA61_04360 PF03009 Glycerophosphoryl diester phosphodiesterase family KJA61_04365 PF00873 AcrB/AcrD/AcrF family KJA61_04375 PF01435 Peptidase family M48 KJA61_04380 PF01464 Transglycosylase SLT domain KJA61_04385 PF01171 PP-loop family KJA61_04395 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA61_04395 PF01464 Transglycosylase SLT domain KJA61_04400 PF01272 Transcription elongation factor, GreA/GreB, C-term KJA61_04400 PF03449 Transcription elongation factor, N-terminal KJA61_04415 PF00550 Phosphopantetheine attachment site KJA61_04415 PF13193 AMP-binding enzyme C-terminal domain KJA61_04415 PF00501 AMP-binding enzyme KJA61_04415 PF00975 Thioesterase domain KJA61_04415 PF00668 Condensation domain KJA61_04440 PF00881 Nitroreductase family KJA61_04455 PF02595 Glycerate kinase family KJA61_04460 PF00384 Molybdopterin oxidoreductase KJA61_04465 PF02634 FdhD/NarQ family KJA61_04470 PF06803 Protein of unknown function (DUF1232) KJA61_04475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA61_04475 PF11890 Domain of unknown function (DUF3410) KJA61_04475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA61_04480 PF00152 tRNA synthetases class II (D, K and N) KJA61_04490 PF18073 Rubredoxin metal binding domain KJA61_04495 PF00324 Amino acid permease KJA61_04505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KJA61_04505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KJA61_04510 PF01678 Diaminopimelate epimerase KJA61_04515 PF01810 LysE type translocator KJA61_04520 PF02899 Phage integrase, N-terminal SAM-like domain KJA61_04520 PF00589 Phage integrase family KJA61_04525 PF01012 Electron transfer flavoprotein domain KJA61_04530 PF01012 Electron transfer flavoprotein domain KJA61_04530 PF00766 Electron transfer flavoprotein FAD-binding domain KJA61_04535 PF00521 DNA gyrase/topoisomerase IV, subunit A KJA61_04535 PF03989 DNA gyrase C-terminal domain, beta-propeller KJA61_04550 PF00535 Glycosyl transferase family 2 KJA61_04570 PF13533 Biotin-lipoyl like KJA61_04580 PF00266 Aminotransferase class-V KJA61_04595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KJA61_04605 PF02687 FtsX-like permease family KJA61_04605 PF12704 MacB-like periplasmic core domain KJA61_04610 PF00005 ABC transporter KJA61_04615 PF13567 Domain of unknown function (DUF4131) KJA61_04615 PF00753 Metallo-beta-lactamase superfamily KJA61_04615 PF03772 Competence protein KJA61_04625 PF06965 Na+/H+ antiporter 1 KJA61_04625 PF01343 Peptidase family S49 KJA61_04630 PF12697 Alpha/beta hydrolase family KJA61_04635 PF00551 Formyl transferase KJA61_04640 PF00586 AIR synthase related protein, N-terminal domain KJA61_04640 PF02769 AIR synthase related protein, C-terminal domain KJA61_04645 PF01594 AI-2E family transporter KJA61_04650 PF00308 Bacterial dnaA protein KJA61_04650 PF08299 Bacterial dnaA protein helix-turn-helix KJA61_04650 PF11638 DnaA N-terminal domain KJA61_04680 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJA61_04680 PF00588 SpoU rRNA Methylase family KJA61_04685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KJA61_04695 PF00691 OmpA family KJA61_04700 PF07676 WD40-like Beta Propeller Repeat KJA61_04700 PF04052 TolB amino-terminal domain KJA61_04710 PF02472 Biopolymer transport protein ExbD/TolR KJA61_04715 PF01618 MotA/TolQ/ExbB proton channel family KJA61_04720 PF03061 Thioesterase superfamily KJA61_04725 PF01546 Peptidase family M20/M25/M40 KJA61_04725 PF07687 Peptidase dimerisation domain KJA61_04730 PF05496 Holliday junction DNA helicase RuvB P-loop domain KJA61_04730 PF05491 RuvB C-terminal winged helix domain KJA61_04730 PF17864 RuvB AAA lid domain KJA61_04735 PF01330 RuvA N terminal domain KJA61_04735 PF07499 RuvA, C-terminal domain KJA61_04740 PF01966 HD domain KJA61_04745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KJA61_04745 PF02769 AIR synthase related protein, C-terminal domain KJA61_04745 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KJA61_04750 PF07690 Major Facilitator Superfamily KJA61_04755 PF01784 NIF3 (NGG1p interacting factor 3) KJA61_04760 PF00378 Enoyl-CoA hydratase/isomerase KJA61_04765 PF01467 Cytidylyltransferase-like KJA61_04765 PF00293 NUDIX domain KJA61_04775 PF00578 AhpC/TSA family KJA61_04790 PF06508 Queuosine biosynthesis protein QueC KJA61_04800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KJA61_04800 PF14602 Hexapeptide repeat of succinyl-transferase KJA61_04800 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_04810 PF03466 LysR substrate binding domain KJA61_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_04815 PF12857 TOBE-like domain KJA61_04815 PF00005 ABC transporter KJA61_04820 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_04825 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_04840 PF01063 Amino-transferase class IV KJA61_04845 PF02618 YceG-like family KJA61_04850 PF02223 Thymidylate kinase KJA61_04860 PF02910 Fumarate reductase flavoprotein C-term KJA61_04860 PF00890 FAD binding domain KJA61_04865 PF13180 PDZ domain KJA61_04875 PF00679 Elongation factor G C-terminus KJA61_04875 PF06421 GTP-binding protein LepA C-terminus KJA61_04875 PF03144 Elongation factor Tu domain 2 KJA61_04875 PF00009 Elongation factor Tu GTP binding domain KJA61_04880 PF10502 Signal peptidase, peptidase S26 KJA61_04890 PF00035 Double-stranded RNA binding motif KJA61_04890 PF14622 Ribonuclease-III-like KJA61_04895 PF07650 KH domain KJA61_04895 PF01926 50S ribosome-binding GTPase KJA61_04905 PF11967 Recombination protein O N terminal KJA61_04905 PF02565 Recombination protein O C terminal KJA61_04910 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KJA61_04915 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KJA61_04920 PF00106 short chain dehydrogenase KJA61_04950 PF00155 Aminotransferase class I and II KJA61_04960 PF00990 Diguanylate cyclase, GGDEF domain KJA61_04960 PF17151 Periplasmic sensor domain KJA61_04970 PF12344 Ultra-violet resistance protein B KJA61_04970 PF00271 Helicase conserved C-terminal domain KJA61_04970 PF04851 Type III restriction enzyme, res subunit KJA61_04970 PF17757 UvrB interaction domain KJA61_04970 PF02151 UvrB/uvrC motif KJA61_04980 PF00892 EamA-like transporter family KJA61_04985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KJA61_04985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KJA61_05000 PF01018 GTP1/OBG KJA61_05000 PF01926 50S ribosome-binding GTPase KJA61_05005 PF01472 PUA domain KJA61_05005 PF00696 Amino acid kinase family KJA61_05015 PF07759 Protein of unknown function (DUF1615) KJA61_05350 PF00589 Phage integrase family KJA61_05355 PF01207 Dihydrouridine synthase (Dus) KJA61_05360 PF03060 Nitronate monooxygenase KJA61_05375 PF02350 UDP-N-acetylglucosamine 2-epimerase KJA61_05405 PF03441 FAD binding domain of DNA photolyase KJA61_05405 PF00875 DNA photolyase KJA61_05410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_05415 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_05420 PF00768 D-alanyl-D-alanine carboxypeptidase KJA61_05420 PF07943 Penicillin-binding protein 5, C-terminal domain KJA61_05430 PF03971 Monomeric isocitrate dehydrogenase KJA61_05435 PF00849 RNA pseudouridylate synthase KJA61_05440 PF00180 Isocitrate/isopropylmalate dehydrogenase KJA61_05460 PF06779 Uncharacterised MFS-type transporter YbfB KJA61_05465 PF03466 LysR substrate binding domain KJA61_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_05470 PF00375 Sodium:dicarboxylate symporter family KJA61_05475 PF02567 Phenazine biosynthesis-like protein KJA61_05480 PF05193 Peptidase M16 inactive domain KJA61_05480 PF00675 Insulinase (Peptidase family M16) KJA61_05505 PF02581 Thiamine monophosphate synthase KJA61_05510 PF00202 Aminotransferase class-III KJA61_05520 PF00849 RNA pseudouridylate synthase KJA61_05525 PF00176 SNF2 family N-terminal domain KJA61_05525 PF00271 Helicase conserved C-terminal domain KJA61_05525 PF12137 RNA polymerase recycling family C-terminal KJA61_05525 PF18337 RapA N-terminal Tudor like domain KJA61_05525 PF18339 RapA N-terminal Tudor like domain 1 KJA61_05535 PF00440 Bacterial regulatory proteins, tetR family KJA61_05540 PF00970 Oxidoreductase FAD-binding domain KJA61_05540 PF00175 Oxidoreductase NAD-binding domain KJA61_05540 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_05545 PF00487 Fatty acid desaturase KJA61_05555 PF00440 Bacterial regulatory proteins, tetR family KJA61_05555 PF17754 MftR C-terminal domain KJA61_05565 PF00202 Aminotransferase class-III KJA61_05570 PF00282 Pyridoxal-dependent decarboxylase conserved domain KJA61_05575 PF00171 Aldehyde dehydrogenase family KJA61_05580 PF01037 Lrp/AsnC ligand binding domain KJA61_05585 PF00205 Thiamine pyrophosphate enzyme, central domain KJA61_05585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJA61_05585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KJA61_05590 PF00324 Amino acid permease KJA61_05595 PF12849 PBP superfamily domain KJA61_05600 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_05605 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_05610 PF00005 ABC transporter KJA61_05615 PF01343 Peptidase family S49 KJA61_05615 PF08496 Peptidase family S49 N-terminal KJA61_05630 PF00206 Lyase KJA61_05630 PF08328 Adenylosuccinate lyase C-terminal KJA61_05635 PF04356 Protein of unknown function (DUF489) KJA61_05645 PF13344 Haloacid dehalogenase-like hydrolase KJA61_05645 PF00293 NUDIX domain KJA61_05650 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_05655 PF07943 Penicillin-binding protein 5, C-terminal domain KJA61_05655 PF00768 D-alanyl-D-alanine carboxypeptidase KJA61_05670 PF01975 Survival protein SurE KJA61_05675 PF01476 LysM domain KJA61_05675 PF01551 Peptidase family M23 KJA61_05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_05680 PF03466 LysR substrate binding domain KJA61_05685 PF13654 AAA domain KJA61_05685 PF05362 Lon protease (S16) C-terminal proteolytic domain KJA61_05690 PF07690 Major Facilitator Superfamily KJA61_05695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA61_05700 PF13593 SBF-like CPA transporter family (DUF4137) KJA61_05705 PF01197 Ribosomal protein L31 KJA61_05720 PF04055 Radical SAM superfamily KJA61_05725 PF08207 Elongation factor P (EF-P) KOW-like domain KJA61_05725 PF01132 Elongation factor P (EF-P) OB domain KJA61_05725 PF09285 Elongation factor P, C-terminal KJA61_05730 PF02554 Carbon starvation protein CstA KJA61_05730 PF13722 5TM C-terminal transporter carbon starvation CstA KJA61_05735 PF04328 Selenoprotein, putative KJA61_05765 PF06018 CodY GAF-like domain KJA61_05765 PF17853 GGDEF-like domain KJA61_05765 PF13556 PucR C-terminal helix-turn-helix domain KJA61_05780 PF00171 Aldehyde dehydrogenase family KJA61_05785 PF00324 Amino acid permease KJA61_05790 PF03466 LysR substrate binding domain KJA61_05790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_05795 PF02028 BCCT, betaine/carnitine/choline family transporter KJA61_05800 PF02028 BCCT, betaine/carnitine/choline family transporter KJA61_05805 PF00355 Rieske [2Fe-2S] domain KJA61_05805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KJA61_05810 PF00171 Aldehyde dehydrogenase family KJA61_05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_05815 PF18113 Rubredoxin binding C-terminal domain KJA61_05820 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KJA61_05820 PF01266 FAD dependent oxidoreductase KJA61_05840 PF00892 EamA-like transporter family KJA61_05850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KJA61_05855 PF00083 Sugar (and other) transporter KJA61_05860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA61_05860 PF13378 Enolase C-terminal domain-like KJA61_05865 PF16197 Ketoacyl-synthetase C-terminal extension KJA61_05865 PF00698 Acyl transferase domain KJA61_05865 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_05865 PF08990 Erythronolide synthase docking KJA61_05865 PF09277 Erythronolide synthase, docking KJA61_05865 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_05865 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_05865 PF08659 KR domain KJA61_05865 PF00550 Phosphopantetheine attachment site KJA61_05865 PF14765 Polyketide synthase dehydratase KJA61_05870 PF00440 Bacterial regulatory proteins, tetR family KJA61_05890 PF17954 Quercetinase C-terminal cupin domain KJA61_05890 PF02678 Pirin KJA61_05900 PF08348 YheO-like PAS domain KJA61_05900 PF13309 HTH domain KJA61_05910 PF00668 Condensation domain KJA61_05910 PF00550 Phosphopantetheine attachment site KJA61_05910 PF13193 AMP-binding enzyme C-terminal domain KJA61_05910 PF00501 AMP-binding enzyme KJA61_05915 PF00550 Phosphopantetheine attachment site KJA61_05915 PF00501 AMP-binding enzyme KJA61_05915 PF00975 Thioesterase domain KJA61_05915 PF13193 AMP-binding enzyme C-terminal domain KJA61_05915 PF00668 Condensation domain KJA61_05920 PF01032 FecCD transport family KJA61_05925 PF01032 FecCD transport family KJA61_05930 PF00005 ABC transporter KJA61_05935 PF01497 Periplasmic binding protein KJA61_05940 PF07715 TonB-dependent Receptor Plug Domain KJA61_05940 PF00593 TonB dependent receptor KJA61_05945 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KJA61_05950 PF00501 AMP-binding enzyme KJA61_05950 PF00668 Condensation domain KJA61_05950 PF00550 Phosphopantetheine attachment site KJA61_05955 PF00501 AMP-binding enzyme KJA61_05955 PF13193 AMP-binding enzyme C-terminal domain KJA61_05960 PF00550 Phosphopantetheine attachment site KJA61_05960 PF00857 Isochorismatase family KJA61_05965 PF00282 Pyridoxal-dependent decarboxylase conserved domain KJA61_05975 PF00005 ABC transporter KJA61_05980 PF00005 ABC transporter KJA61_05985 PF00975 Thioesterase domain KJA61_05995 PF00425 chorismate binding enzyme KJA61_06005 PF01208 Uroporphyrinogen decarboxylase (URO-D) KJA61_06010 PF05675 Protein of unknown function (DUF817) KJA61_06025 PF00144 Beta-lactamase KJA61_06035 PF01227 GTP cyclohydrolase I KJA61_06040 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_06040 PF01799 [2Fe-2S] binding domain KJA61_06045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KJA61_06045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KJA61_06060 PF00218 Indole-3-glycerol phosphate synthase KJA61_06065 PF00591 Glycosyl transferase family, a/b domain KJA61_06065 PF02885 Glycosyl transferase family, helical bundle domain KJA61_06070 PF07715 TonB-dependent Receptor Plug Domain KJA61_06070 PF00593 TonB dependent receptor KJA61_06075 PF11838 ERAP1-like C-terminal domain KJA61_06075 PF01433 Peptidase family M1 domain KJA61_06080 PF00117 Glutamine amidotransferase class-I KJA61_06090 PF00854 POT family KJA61_06095 PF00120 Glutamine synthetase, catalytic domain KJA61_06095 PF03951 Glutamine synthetase, beta-Grasp domain KJA61_06100 PF04345 Chorismate lyase KJA61_06105 PF01040 UbiA prenyltransferase family KJA61_06140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KJA61_06140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KJA61_06145 PF01784 NIF3 (NGG1p interacting factor 3) KJA61_06150 PF13180 PDZ domain KJA61_06155 PF12627 Probable RNA and SrmB- binding site of polymerase A KJA61_06155 PF01743 Poly A polymerase head domain KJA61_06160 PF00390 Malic enzyme, N-terminal domain KJA61_06160 PF03949 Malic enzyme, NAD binding domain KJA61_06160 PF01515 Phosphate acetyl/butaryl transferase KJA61_06165 PF03707 Bacterial signalling protein N terminal repeat KJA61_06165 PF00990 Diguanylate cyclase, GGDEF domain KJA61_06165 PF00563 EAL domain KJA61_06170 PF04452 RNA methyltransferase KJA61_06175 PF02219 Methylenetetrahydrofolate reductase KJA61_06180 PF05221 S-adenosyl-L-homocysteine hydrolase KJA61_06180 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KJA61_06195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_06195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_06195 PF09317 Domain of unknown function (DUF1974) KJA61_06200 PF04055 Radical SAM superfamily KJA61_06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_06205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA61_06215 PF07690 Major Facilitator Superfamily KJA61_06225 PF00557 Metallopeptidase family M24 KJA61_06230 PF00318 Ribosomal protein S2 KJA61_06235 PF00889 Elongation factor TS KJA61_06245 PF12833 Helix-turn-helix domain KJA61_06265 PF03330 Lytic transglycolase KJA61_06265 PF05036 Sporulation related domain KJA61_06270 PF13406 Transglycosylase SLT domain KJA61_06275 PF01098 Cell cycle protein KJA61_06285 PF14489 QueF-like protein KJA61_06285 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KJA61_06290 PF01061 ABC-2 type transporter KJA61_06295 PF00005 ABC transporter KJA61_06325 PF00464 Serine hydroxymethyltransferase KJA61_06330 PF02321 Outer membrane efflux protein KJA61_06335 PF00873 AcrB/AcrD/AcrF family KJA61_06340 PF13533 Biotin-lipoyl like KJA61_06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_06345 PF03466 LysR substrate binding domain KJA61_06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA61_06355 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_06360 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_06365 PF00005 ABC transporter KJA61_06370 PF00893 Small Multidrug Resistance protein KJA61_06375 PF00037 4Fe-4S binding domain KJA61_06380 PF01136 Peptidase family U32 KJA61_06380 PF16325 Peptidase family U32 C-terminal domain KJA61_06385 PF00392 Bacterial regulatory proteins, gntR family KJA61_06385 PF00155 Aminotransferase class I and II KJA61_06390 PF02567 Phenazine biosynthesis-like protein KJA61_06395 PF00970 Oxidoreductase FAD-binding domain KJA61_06395 PF00175 Oxidoreductase NAD-binding domain KJA61_06400 PF18389 TrmO C-terminal domain KJA61_06400 PF01980 tRNA-methyltransferase O KJA61_06410 PF00437 Type II/IV secretion system protein KJA61_06410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA61_06420 PF00072 Response regulator receiver domain KJA61_06420 PF00486 Transcriptional regulatory protein, C terminal KJA61_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_06425 PF00512 His Kinase A (phospho-acceptor) domain KJA61_06425 PF08521 Two-component sensor kinase N-terminal KJA61_06435 PF00293 NUDIX domain KJA61_06445 PF14814 Bifunctional transglycosylase second domain KJA61_06445 PF00905 Penicillin binding protein transpeptidase domain KJA61_06445 PF00912 Transglycosylase KJA61_06450 PF01513 ATP-NAD kinase KJA61_06455 PF07023 Protein of unknown function (DUF1315) KJA61_06460 PF00591 Glycosyl transferase family, a/b domain KJA61_06460 PF02885 Glycosyl transferase family, helical bundle domain KJA61_06465 PF00375 Sodium:dicarboxylate symporter family KJA61_06470 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_06470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_06470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_06475 PF00756 Putative esterase KJA61_06480 PF01842 ACT domain KJA61_06480 PF00800 Prephenate dehydratase KJA61_06480 PF01817 Chorismate mutase type II KJA61_06485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJA61_06495 PF07687 Peptidase dimerisation domain KJA61_06495 PF01546 Peptidase family M20/M25/M40 KJA61_06500 PF12706 Beta-lactamase superfamily domain KJA61_06510 PF03883 Peroxide stress protein YaaA KJA61_06520 PF05690 Thiazole biosynthesis protein ThiG KJA61_06530 PF04241 Protein of unknown function (DUF423) KJA61_06535 PF04545 Sigma-70, region 4 KJA61_06535 PF04542 Sigma-70 region 2 KJA61_06535 PF00140 Sigma-70 factor, region 1.2 KJA61_06545 PF00313 'Cold-shock' DNA-binding domain KJA61_06550 PF00270 DEAD/DEAH box helicase KJA61_06550 PF00271 Helicase conserved C-terminal domain KJA61_06560 PF00881 Nitroreductase family KJA61_06565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KJA61_06565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KJA61_06585 PF01180 Dihydroorotate dehydrogenase KJA61_06590 PF02674 Colicin V production protein KJA61_06595 PF00156 Phosphoribosyl transferase domain KJA61_06610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA61_06610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA61_06615 PF01435 Peptidase family M48 KJA61_06620 PF09424 Yqey-like protein KJA61_06625 PF01165 Ribosomal protein S21 KJA61_06630 PF00814 Glycoprotease family KJA61_06650 PF00069 Protein kinase domain KJA61_06675 PF03466 LysR substrate binding domain KJA61_06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_06680 PF00202 Aminotransferase class-III KJA61_06685 PF00171 Aldehyde dehydrogenase family KJA61_06690 PF00324 Amino acid permease KJA61_06720 PF04076 Bacterial OB fold (BOF) protein KJA61_06745 PF00561 alpha/beta hydrolase fold KJA61_06750 PF03616 Sodium/glutamate symporter KJA61_06760 PF07729 FCD domain KJA61_06760 PF00392 Bacterial regulatory proteins, gntR family KJA61_06810 PF00083 Sugar (and other) transporter KJA61_06810 PF08946 Osmosensory transporter coiled coil KJA61_06830 PF00155 Aminotransferase class I and II KJA61_06835 PF02080 TrkA-C domain KJA61_06835 PF06826 Predicted Permease Membrane Region KJA61_06845 PF04403 Paraquat-inducible protein A KJA61_06850 PF02470 MlaD protein KJA61_06860 PF01177 Asp/Glu/Hydantoin racemase KJA61_06865 PF00892 EamA-like transporter family KJA61_06870 PF07995 Glucose / Sorbosone dehydrogenase KJA61_06880 PF13610 DDE domain KJA61_06890 PF01636 Phosphotransferase enzyme family KJA61_06895 PF13610 DDE domain KJA61_06910 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_06915 PF13427 Domain of unknown function (DUF4111) KJA61_06915 PF01909 Nucleotidyltransferase domain KJA61_06920 PF00893 Small Multidrug Resistance protein KJA61_06925 PF00809 Pterin binding enzyme KJA61_06940 PF07091 Ribosomal RNA methyltransferase (FmrO) KJA61_06965 PF13610 DDE domain KJA61_06980 PF00375 Sodium:dicarboxylate symporter family KJA61_06990 PF16123 Hydroxyacylglutathione hydrolase C-terminus KJA61_06990 PF00753 Metallo-beta-lactamase superfamily KJA61_06995 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_07000 PF00005 ABC transporter KJA61_07000 PF09383 NIL domain KJA61_07005 PF03180 NLPA lipoprotein KJA61_07010 PF02844 Phosphoribosylglycinamide synthetase, N domain KJA61_07010 PF02843 Phosphoribosylglycinamide synthetase, C domain KJA61_07010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KJA61_07015 PF02142 MGS-like domain KJA61_07015 PF01808 AICARFT/IMPCHase bienzyme KJA61_07020 PF02954 Bacterial regulatory protein, Fis family KJA61_07040 PF13932 GidA associated domain KJA61_07040 PF01134 Glucose inhibited division protein A KJA61_07050 PF14403 Circularly permuted ATP-grasp type 2 KJA61_07060 PF08379 Bacterial transglutaminase-like N-terminal region KJA61_07060 PF01841 Transglutaminase-like superfamily KJA61_07070 PF00842 Alanine racemase, C-terminal domain KJA61_07070 PF01168 Alanine racemase, N-terminal domain KJA61_07075 PF00772 DnaB-like helicase N terminal domain KJA61_07075 PF03796 DnaB-like helicase C terminal domain KJA61_07080 PF03948 Ribosomal protein L9, C-terminal domain KJA61_07080 PF01281 Ribosomal protein L9, N-terminal domain KJA61_07085 PF01084 Ribosomal protein S18 KJA61_07090 PF01250 Ribosomal protein S6 KJA61_07095 PF01040 UbiA prenyltransferase family KJA61_07100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KJA61_07105 PF00510 Cytochrome c oxidase subunit III KJA61_07110 PF00115 Cytochrome C and Quinol oxidase polypeptide I KJA61_07115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KJA61_07115 PF06481 COX Aromatic Rich Motif KJA61_07125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KJA61_07125 PF02896 PEP-utilising enzyme, TIM barrel domain KJA61_07125 PF00391 PEP-utilising enzyme, mobile domain KJA61_07130 PF03618 Kinase/pyrophosphorylase KJA61_07140 PF14883 Hypothetical glycosyl hydrolase family 13 KJA61_07140 PF01522 Polysaccharide deacetylase KJA61_07145 PF00535 Glycosyl transferase family 2 KJA61_07150 PF13994 PgaD-like protein KJA61_07160 PF00296 Luciferase-like monooxygenase KJA61_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_07175 PF03466 LysR substrate binding domain KJA61_07185 PF03462 PCRF domain KJA61_07185 PF00472 RF-1 domain KJA61_07190 PF13847 Methyltransferase domain KJA61_07190 PF17827 PrmC N-terminal domain KJA61_07195 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_07200 PF09084 NMT1/THI5 like KJA61_07205 PF12833 Helix-turn-helix domain KJA61_07210 PF00106 short chain dehydrogenase KJA61_07215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_07215 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_07215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_07220 PF13193 AMP-binding enzyme C-terminal domain KJA61_07220 PF00501 AMP-binding enzyme KJA61_07225 PF01613 Flavin reductase like domain KJA61_07230 PF00899 ThiF family KJA61_07235 PF03109 ABC1 family KJA61_07250 PF03814 Potassium-transporting ATPase A subunit KJA61_07260 PF02669 K+-transporting ATPase, c chain KJA61_07265 PF02702 Osmosensitive K+ channel His kinase sensor domain KJA61_07265 PF13493 Domain of unknown function (DUF4118) KJA61_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_07265 PF00512 His Kinase A (phospho-acceptor) domain KJA61_07270 PF00486 Transcriptional regulatory protein, C terminal KJA61_07270 PF00072 Response regulator receiver domain KJA61_07275 PF00120 Glutamine synthetase, catalytic domain KJA61_07285 PF03232 Ubiquinone biosynthesis protein COQ7 KJA61_07290 PF07690 Major Facilitator Superfamily KJA61_07295 PF01103 Surface antigen KJA61_07295 PF07244 Surface antigen variable number repeat KJA61_07295 PF17243 POTRA domain TamA domain 1 KJA61_07310 PF00330 Aconitase family (aconitate hydratase) KJA61_07310 PF11791 Aconitate B N-terminal domain KJA61_07310 PF06434 Aconitate hydratase 2 N-terminus KJA61_07320 PF00027 Cyclic nucleotide-binding domain KJA61_07320 PF00520 Ion transport protein KJA61_07325 PF07690 Major Facilitator Superfamily KJA61_07340 PF03466 LysR substrate binding domain KJA61_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_07345 PF04284 Protein of unknown function (DUF441) KJA61_07355 PF00849 RNA pseudouridylate synthase KJA61_07355 PF01479 S4 domain KJA61_07370 PF00849 RNA pseudouridylate synthase KJA61_07370 PF01479 S4 domain KJA61_07375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KJA61_07380 PF01119 DNA mismatch repair protein, C-terminal domain KJA61_07380 PF08676 MutL C terminal dimerisation domain KJA61_07390 PF17209 Hfq protein KJA61_07400 PF00881 Nitroreductase family KJA61_07410 PF00149 Calcineurin-like phosphoesterase KJA61_07415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KJA61_07420 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA61_07420 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KJA61_07425 PF02540 NAD synthase KJA61_07425 PF00117 Glutamine amidotransferase class-I KJA61_07425 PF00958 GMP synthase C terminal domain KJA61_07430 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KJA61_07435 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KJA61_07440 PF13520 Amino acid permease KJA61_07445 PF00171 Aldehyde dehydrogenase family KJA61_07460 PF00465 Iron-containing alcohol dehydrogenase KJA61_07465 PF14493 Helix-turn-helix domain KJA61_07465 PF05970 PIF1-like helicase KJA61_07475 PF06445 GyrI-like small molecule binding domain KJA61_07480 PF02110 Hydroxyethylthiazole kinase family KJA61_07495 PF11940 Domain of unknown function (DUF3458) Ig-like fold KJA61_07495 PF01433 Peptidase family M1 domain KJA61_07495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KJA61_07505 PF00106 short chain dehydrogenase KJA61_07515 PF01817 Chorismate mutase type II KJA61_07520 PF01037 Lrp/AsnC ligand binding domain KJA61_07530 PF00440 Bacterial regulatory proteins, tetR family KJA61_07535 PF07715 TonB-dependent Receptor Plug Domain KJA61_07535 PF00593 TonB dependent receptor KJA61_07540 PF00924 Mechanosensitive ion channel KJA61_07575 PF07715 TonB-dependent Receptor Plug Domain KJA61_07575 PF00593 TonB dependent receptor KJA61_07595 PF00005 ABC transporter KJA61_07595 PF12848 ABC transporter KJA61_07600 PF00582 Universal stress protein family KJA61_07625 PF00689 Cation transporting ATPase, C-terminus KJA61_07625 PF00690 Cation transporter/ATPase, N-terminus KJA61_07630 PF02308 MgtC family KJA61_07635 PF03594 Benzoate membrane transport protein KJA61_07640 PF01037 Lrp/AsnC ligand binding domain KJA61_07645 PF01810 LysE type translocator KJA61_07650 PF00923 Transaldolase/Fructose-6-phosphate aldolase KJA61_07655 PF03466 LysR substrate binding domain KJA61_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_07665 PF00108 Thiolase, N-terminal domain KJA61_07665 PF02803 Thiolase, C-terminal domain KJA61_07675 PF01575 MaoC like domain KJA61_07680 PF00144 Beta-lactamase KJA61_07690 PF07690 Major Facilitator Superfamily KJA61_07695 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KJA61_07695 PF12169 DNA polymerase III subunits gamma and tau domain III KJA61_07695 PF12170 DNA polymerase III tau subunit V interacting with alpha KJA61_07700 PF04185 Phosphoesterase family KJA61_07700 PF05506 Domain of unknown function (DUF756) KJA61_07705 PF03061 Thioesterase superfamily KJA61_07710 PF00465 Iron-containing alcohol dehydrogenase KJA61_07720 PF01451 Low molecular weight phosphotyrosine protein phosphatase KJA61_07725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KJA61_07725 PF01565 FAD binding domain KJA61_07740 PF01645 Conserved region in glutamate synthase KJA61_07760 PF12832 MFS_1 like family KJA61_07770 PF02785 Biotin carboxylase C-terminal domain KJA61_07770 PF00289 Biotin carboxylase, N-terminal domain KJA61_07770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_07775 PF00364 Biotin-requiring enzyme KJA61_07780 PF01220 Dehydroquinase class II KJA61_07785 PF00817 impB/mucB/samB family KJA61_07785 PF11799 impB/mucB/samB family C-terminal domain KJA61_07785 PF13438 Domain of unknown function (DUF4113) KJA61_07795 PF00005 ABC transporter KJA61_07800 PF00072 Response regulator receiver domain KJA61_07800 PF00486 Transcriptional regulatory protein, C terminal KJA61_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_07810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KJA61_07810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KJA61_07810 PF13806 Rieske-like [2Fe-2S] domain KJA61_07810 PF18267 Rubredoxin NAD+ reductase C-terminal domain KJA61_07810 PF04324 BFD-like [2Fe-2S] binding domain KJA61_07815 PF04324 BFD-like [2Fe-2S] binding domain KJA61_07815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KJA61_07815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KJA61_07815 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_07815 PF18267 Rubredoxin NAD+ reductase C-terminal domain KJA61_07820 PF01568 Molydopterin dinucleotide binding domain KJA61_07820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KJA61_07820 PF04324 BFD-like [2Fe-2S] binding domain KJA61_07820 PF00384 Molybdopterin oxidoreductase KJA61_07825 PF12804 MobA-like NTP transferase domain KJA61_07830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KJA61_07830 PF00384 Molybdopterin oxidoreductase KJA61_07830 PF01568 Molydopterin dinucleotide binding domain KJA61_07835 PF06463 Molybdenum Cofactor Synthesis C KJA61_07835 PF04055 Radical SAM superfamily KJA61_07845 PF02391 MoaE protein KJA61_07850 PF00994 Probable molybdopterin binding domain KJA61_07850 PF01967 MoaC family KJA61_07855 PF00994 Probable molybdopterin binding domain KJA61_07855 PF03453 MoeA N-terminal region (domain I and II) KJA61_07855 PF03454 MoeA C-terminal region (domain IV) KJA61_07860 PF01638 HxlR-like helix-turn-helix KJA61_07865 PF00155 Aminotransferase class I and II KJA61_07865 PF00392 Bacterial regulatory proteins, gntR family KJA61_07870 PF00892 EamA-like transporter family KJA61_07890 PF02635 DsrE/DsrF-like family KJA61_07895 PF16363 GDP-mannose 4,6 dehydratase KJA61_07900 PF00206 Lyase KJA61_07900 PF10415 Fumarase C C-terminus KJA61_07920 PF01266 FAD dependent oxidoreductase KJA61_07930 PF02542 YgbB family KJA61_07940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJA61_07940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJA61_07945 PF00440 Bacterial regulatory proteins, tetR family KJA61_07950 PF00072 Response regulator receiver domain KJA61_07950 PF02954 Bacterial regulatory protein, Fis family KJA61_07950 PF00158 Sigma-54 interaction domain KJA61_07955 PF00989 PAS fold KJA61_07955 PF00512 His Kinase A (phospho-acceptor) domain KJA61_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_07960 PF00919 Uncharacterized protein family UPF0004 KJA61_07960 PF18693 TRAM domain KJA61_07960 PF04055 Radical SAM superfamily KJA61_07965 PF00696 Amino acid kinase family KJA61_07970 PF01765 Ribosome recycling factor KJA61_07975 PF01255 Putative undecaprenyl diphosphate synthase KJA61_07985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KJA61_07985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KJA61_07985 PF13288 DXP reductoisomerase C-terminal domain KJA61_07990 PF13180 PDZ domain KJA61_07990 PF17820 PDZ domain KJA61_07990 PF02163 Peptidase family M50 KJA61_07995 PF01103 Surface antigen KJA61_07995 PF07244 Surface antigen variable number repeat KJA61_08005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KJA61_08005 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_08010 PF07977 FabA-like domain KJA61_08015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KJA61_08015 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_08030 PF02631 RecX family KJA61_08035 PF00154 recA bacterial DNA recombination protein KJA61_08040 PF01479 S4 domain KJA61_08045 PF13419 Haloacid dehalogenase-like hydrolase KJA61_08070 PF01037 Lrp/AsnC ligand binding domain KJA61_08075 PF00266 Aminotransferase class-V KJA61_08080 PF00324 Amino acid permease KJA61_08090 PF00082 Subtilase family KJA61_08090 PF05922 Peptidase inhibitor I9 KJA61_08095 PF01740 STAS domain KJA61_08095 PF00916 Sulfate permease family KJA61_08100 PF02586 SOS response associated peptidase (SRAP) KJA61_08105 PF07995 Glucose / Sorbosone dehydrogenase KJA61_08115 PF00563 EAL domain KJA61_08115 PF00990 Diguanylate cyclase, GGDEF domain KJA61_08115 PF03707 Bacterial signalling protein N terminal repeat KJA61_08135 PF02378 Phosphotransferase system, EIIC KJA61_08135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KJA61_08140 PF00294 pfkB family carbohydrate kinase KJA61_08145 PF02896 PEP-utilising enzyme, TIM barrel domain KJA61_08145 PF05524 PEP-utilising enzyme, N-terminal KJA61_08145 PF00381 PTS HPr component phosphorylation site KJA61_08145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KJA61_08145 PF00391 PEP-utilising enzyme, mobile domain KJA61_08170 PF05525 Branched-chain amino acid transport protein KJA61_08175 PF00557 Metallopeptidase family M24 KJA61_08180 PF03466 LysR substrate binding domain KJA61_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_08190 PF00462 Glutaredoxin KJA61_08195 PF00202 Aminotransferase class-III KJA61_08200 PF00571 CBS domain KJA61_08200 PF00478 IMP dehydrogenase / GMP reductase domain KJA61_08225 PF02881 SRP54-type protein, helical bundle domain KJA61_08225 PF00448 SRP54-type protein, GTPase domain KJA61_08235 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KJA61_08250 PF08173 Membrane bound YbgT-like protein KJA61_08255 PF02322 Cytochrome bd terminal oxidase subunit II KJA61_08260 PF01654 Cytochrome bd terminal oxidase subunit I KJA61_08270 PF07290 Protein of unknown function (DUF1449) KJA61_08280 PF00294 pfkB family carbohydrate kinase KJA61_08285 PF00593 TonB dependent receptor KJA61_08285 PF07715 TonB-dependent Receptor Plug Domain KJA61_08290 PF08367 Peptidase M16C associated KJA61_08290 PF00675 Insulinase (Peptidase family M16) KJA61_08290 PF05193 Peptidase M16 inactive domain KJA61_08295 PF02253 Phospholipase A1 KJA61_08300 PF02386 Cation transport protein KJA61_08305 PF02254 TrkA-N domain KJA61_08305 PF02080 TrkA-C domain KJA61_08310 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_08310 PF00585 C-terminal regulatory domain of Threonine dehydratase KJA61_08315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KJA61_08330 PF01118 Semialdehyde dehydrogenase, NAD binding domain KJA61_08330 PF02774 Semialdehyde dehydrogenase, dimerisation domain KJA61_08340 PF02617 ATP-dependent Clp protease adaptor protein ClpS KJA61_08345 PF10431 C-terminal, D2-small domain, of ClpB protein KJA61_08345 PF02861 Clp amino terminal domain, pathogenicity island component KJA61_08345 PF07724 AAA domain (Cdc48 subfamily) KJA61_08345 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_08345 PF17871 AAA lid domain KJA61_08350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KJA61_08355 PF00793 DAHP synthetase I family KJA61_08370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_08400 PF00117 Glutamine amidotransferase class-I KJA61_08400 PF06418 CTP synthase N-terminus KJA61_08405 PF00793 DAHP synthetase I family KJA61_08410 PF03952 Enolase, N-terminal domain KJA61_08410 PF00113 Enolase, C-terminal TIM barrel domain KJA61_08415 PF04239 Protein of unknown function (DUF421) KJA61_08420 PF04977 Septum formation initiator KJA61_08425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KJA61_08430 PF01144 Coenzyme A transferase KJA61_08435 PF01144 Coenzyme A transferase KJA61_08440 PF02803 Thiolase, C-terminal domain KJA61_08440 PF00108 Thiolase, N-terminal domain KJA61_08445 PF00206 Lyase KJA61_08445 PF10397 Adenylosuccinate lyase C-terminus KJA61_08450 PF00561 alpha/beta hydrolase fold KJA61_08455 PF07690 Major Facilitator Superfamily KJA61_08460 PF02627 Carboxymuconolactone decarboxylase family KJA61_08465 PF00775 Dioxygenase KJA61_08465 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KJA61_08470 PF00775 Dioxygenase KJA61_08475 PF01487 Type I 3-dehydroquinase KJA61_08480 PF05048 Periplasmic copper-binding protein (NosD) KJA61_08485 PF04966 Carbohydrate-selective porin, OprB family KJA61_08490 PF01011 PQQ enzyme repeat KJA61_08490 PF13360 PQQ-like domain KJA61_08500 PF04143 Sulphur transport KJA61_08510 PF00753 Metallo-beta-lactamase superfamily KJA61_08515 PF01614 Bacterial transcriptional regulator KJA61_08515 PF09339 IclR helix-turn-helix domain KJA61_08520 PF03466 LysR substrate binding domain KJA61_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_08525 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_08525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_08525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_08540 PF00106 short chain dehydrogenase KJA61_08550 PF07690 Major Facilitator Superfamily KJA61_08560 PF01425 Amidase KJA61_08565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA61_08580 PF00355 Rieske [2Fe-2S] domain KJA61_08580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KJA61_08595 PF00175 Oxidoreductase NAD-binding domain KJA61_08595 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_08600 PF01613 Flavin reductase like domain KJA61_08605 PF12833 Helix-turn-helix domain KJA61_08605 PF02311 AraC-like ligand binding domain KJA61_08610 PF01179 Copper amine oxidase, enzyme domain KJA61_08610 PF07833 Copper amine oxidase N-terminal domain KJA61_08610 PF02728 Copper amine oxidase, N3 domain KJA61_08610 PF02727 Copper amine oxidase, N2 domain KJA61_08620 PF00171 Aldehyde dehydrogenase family KJA61_08625 PF01804 Penicillin amidase KJA61_08630 PF12146 Serine aminopeptidase, S33 KJA61_08635 PF00108 Thiolase, N-terminal domain KJA61_08635 PF02803 Thiolase, C-terminal domain KJA61_08640 PF01144 Coenzyme A transferase KJA61_08645 PF01144 Coenzyme A transferase KJA61_08650 PF04444 Catechol dioxygenase N terminus KJA61_08650 PF00775 Dioxygenase KJA61_08655 PF02426 Muconolactone delta-isomerase KJA61_08660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJA61_08660 PF13378 Enolase C-terminal domain-like KJA61_08665 PF03466 LysR substrate binding domain KJA61_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_08675 PF07729 FCD domain KJA61_08675 PF00392 Bacterial regulatory proteins, gntR family KJA61_08680 PF00920 Dehydratase family KJA61_08685 PF07690 Major Facilitator Superfamily KJA61_08695 PF00171 Aldehyde dehydrogenase family KJA61_08715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_08715 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_08715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_08725 PF06506 Propionate catabolism activator KJA61_08725 PF00158 Sigma-54 interaction domain KJA61_08725 PF02954 Bacterial regulatory protein, Fis family KJA61_08730 PF00501 AMP-binding enzyme KJA61_08730 PF13193 AMP-binding enzyme C-terminal domain KJA61_08735 PF04341 Protein of unknown function, DUF485 KJA61_08740 PF00474 Sodium:solute symporter family KJA61_08745 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_08745 PF00107 Zinc-binding dehydrogenase KJA61_08750 PF00171 Aldehyde dehydrogenase family KJA61_08760 PF00561 alpha/beta hydrolase fold KJA61_08765 PF00199 Catalase KJA61_08765 PF06628 Catalase-related immune-responsive KJA61_08780 PF07859 alpha/beta hydrolase fold KJA61_08785 PF01047 MarR family KJA61_08790 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_08790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_08795 PF00106 short chain dehydrogenase KJA61_08800 PF01872 RibD C-terminal domain KJA61_08805 PF00376 MerR family regulatory protein KJA61_08805 PF09278 MerR, DNA binding KJA61_08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_08825 PF12706 Beta-lactamase superfamily domain KJA61_08830 PF08359 YsiA-like protein, C-terminal region KJA61_08830 PF00440 Bacterial regulatory proteins, tetR family KJA61_08840 PF00857 Isochorismatase family KJA61_08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_08845 PF03466 LysR substrate binding domain KJA61_08850 PF07995 Glucose / Sorbosone dehydrogenase KJA61_08865 PF07687 Peptidase dimerisation domain KJA61_08865 PF01546 Peptidase family M20/M25/M40 KJA61_08875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KJA61_08875 PF08479 POTRA domain, ShlB-type KJA61_08875 PF17287 POTRA domain KJA61_08880 PF13018 Extended Signal Peptide of Type V secretion system KJA61_08880 PF13332 Hemagglutinin repeat KJA61_08880 PF05860 haemagglutination activity domain KJA61_08880 PF04829 Pre-toxin domain with VENN motif KJA61_08895 PF07690 Major Facilitator Superfamily KJA61_08900 PF04909 Amidohydrolase KJA61_08910 PF00392 Bacterial regulatory proteins, gntR family KJA61_08910 PF07702 UTRA domain KJA61_08915 PF08450 SMP-30/Gluconolactonase/LRE-like region KJA61_08925 PF03466 LysR substrate binding domain KJA61_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_08945 PF07690 Major Facilitator Superfamily KJA61_08950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJA61_08950 PF01842 ACT domain KJA61_08950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJA61_08955 PF03737 Aldolase/RraA KJA61_08975 PF00529 HlyD membrane-fusion protein of T1SS KJA61_08975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_08990 PF00171 Aldehyde dehydrogenase family KJA61_08995 PF00920 Dehydratase family KJA61_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_09005 PF03466 LysR substrate binding domain KJA61_09010 PF01370 NAD dependent epimerase/dehydratase family KJA61_09015 PF07690 Major Facilitator Superfamily KJA61_09020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA61_09020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA61_09025 PF06719 AraC-type transcriptional regulator N-terminus KJA61_09025 PF12833 Helix-turn-helix domain KJA61_09040 PF00107 Zinc-binding dehydrogenase KJA61_09040 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_09050 PF01032 FecCD transport family KJA61_09055 PF00005 ABC transporter KJA61_09075 PF14572 Phosphoribosyl synthetase-associated domain KJA61_09075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KJA61_09080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KJA61_09150 PF00196 Bacterial regulatory proteins, luxR family KJA61_09155 PF01425 Amidase KJA61_09160 PF13533 Biotin-lipoyl like KJA61_09165 PF07690 Major Facilitator Superfamily KJA61_09190 PF01975 Survival protein SurE KJA61_09200 PF02824 TGS domain KJA61_09200 PF13291 ACT domain KJA61_09200 PF04607 Region found in RelA / SpoT proteins KJA61_09250 PF12146 Serine aminopeptidase, S33 KJA61_09255 PF02311 AraC-like ligand binding domain KJA61_09255 PF12833 Helix-turn-helix domain KJA61_09265 PF00672 HAMP domain KJA61_09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_09265 PF00512 His Kinase A (phospho-acceptor) domain KJA61_09265 PF16527 Two-component sensor protein CpxA, periplasmic domain KJA61_09270 PF00072 Response regulator receiver domain KJA61_09270 PF00486 Transcriptional regulatory protein, C terminal KJA61_09275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_09275 PF00529 HlyD membrane-fusion protein of T1SS KJA61_09280 PF00873 AcrB/AcrD/AcrF family KJA61_09285 PF02321 Outer membrane efflux protein KJA61_09290 PF12146 Serine aminopeptidase, S33 KJA61_09295 PF00743 Flavin-binding monooxygenase-like KJA61_09300 PF01593 Flavin containing amine oxidoreductase KJA61_09315 PF01266 FAD dependent oxidoreductase KJA61_09335 PF16970 Type-1 fimbrial protein, A KJA61_09345 PF02753 Pili assembly chaperone PapD, C-terminal domain KJA61_09345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KJA61_09350 PF13953 PapC C-terminal domain KJA61_09350 PF13954 PapC N-terminal domain KJA61_09350 PF00577 Outer membrane usher protein KJA61_09355 PF00419 Fimbrial protein KJA61_09365 PF00107 Zinc-binding dehydrogenase KJA61_09365 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_09375 PF00199 Catalase KJA61_09390 PF13091 PLD-like domain KJA61_09405 PF01244 Membrane dipeptidase (Peptidase family M19) KJA61_09410 PF04055 Radical SAM superfamily KJA61_09410 PF13186 Iron-sulfur cluster-binding domain KJA61_09415 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KJA61_09420 PF03070 TENA/THI-4/PQQC family KJA61_09425 PF12706 Beta-lactamase superfamily domain KJA61_09430 PF08042 PqqA family KJA61_09435 PF17941 Polyphosphate kinase C-terminal domain 1 KJA61_09435 PF13090 Polyphosphate kinase C-terminal domain 2 KJA61_09435 PF13089 Polyphosphate kinase N-terminal domain KJA61_09435 PF02503 Polyphosphate kinase middle domain KJA61_09440 PF00149 Calcineurin-like phosphoesterase KJA61_09450 PF00857 Isochorismatase family KJA61_09450 PF00550 Phosphopantetheine attachment site KJA61_09455 PF00106 short chain dehydrogenase KJA61_09460 PF00005 ABC transporter KJA61_09460 PF03459 TOBE domain KJA61_09465 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_09475 PF03459 TOBE domain KJA61_09480 PF00355 Rieske [2Fe-2S] domain KJA61_09480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KJA61_09485 PF00866 Ring hydroxylating beta subunit KJA61_09490 PF00175 Oxidoreductase NAD-binding domain KJA61_09490 PF00970 Oxidoreductase FAD-binding domain KJA61_09490 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_09495 PF12833 Helix-turn-helix domain KJA61_09495 PF14525 AraC-binding-like domain KJA61_09505 PF01613 Flavin reductase like domain KJA61_09520 PF01738 Dienelactone hydrolase family KJA61_09525 PF07690 Major Facilitator Superfamily KJA61_09530 PF06719 AraC-type transcriptional regulator N-terminus KJA61_09530 PF12833 Helix-turn-helix domain KJA61_09555 PF03466 LysR substrate binding domain KJA61_09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_09560 PF01144 Coenzyme A transferase KJA61_09565 PF01144 Coenzyme A transferase KJA61_09570 PF02667 Short chain fatty acid transporter KJA61_09575 PF02803 Thiolase, C-terminal domain KJA61_09575 PF00108 Thiolase, N-terminal domain KJA61_09580 PF03466 LysR substrate binding domain KJA61_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_09585 PF03466 LysR substrate binding domain KJA61_09600 PF10415 Fumarase C C-terminus KJA61_09600 PF00206 Lyase KJA61_09605 PF00593 TonB dependent receptor KJA61_09605 PF07715 TonB-dependent Receptor Plug Domain KJA61_09610 PF00083 Sugar (and other) transporter KJA61_09625 PF00005 ABC transporter KJA61_09630 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_09635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KJA61_09650 PF00392 Bacterial regulatory proteins, gntR family KJA61_09650 PF07702 UTRA domain KJA61_09660 PF02525 Flavodoxin-like fold KJA61_09665 PF01638 HxlR-like helix-turn-helix KJA61_09670 PF12833 Helix-turn-helix domain KJA61_09670 PF06445 GyrI-like small molecule binding domain KJA61_09685 PF01925 Sulfite exporter TauE/SafE KJA61_09690 PF00753 Metallo-beta-lactamase superfamily KJA61_09690 PF04273 Putative phosphatase (DUF442) KJA61_09695 PF04273 Putative phosphatase (DUF442) KJA61_09695 PF00753 Metallo-beta-lactamase superfamily KJA61_09700 PF02954 Bacterial regulatory protein, Fis family KJA61_09700 PF00072 Response regulator receiver domain KJA61_09700 PF00158 Sigma-54 interaction domain KJA61_09705 PF01062 Bestrophin, RFP-TM, chloride channel KJA61_09710 PF00107 Zinc-binding dehydrogenase KJA61_09710 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_09715 PF00106 short chain dehydrogenase KJA61_09720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJA61_09720 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_09725 PF02817 e3 binding domain KJA61_09725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KJA61_09725 PF00364 Biotin-requiring enzyme KJA61_09730 PF02779 Transketolase, pyrimidine binding domain KJA61_09730 PF02780 Transketolase, C-terminal domain KJA61_09735 PF00676 Dehydrogenase E1 component KJA61_09740 PF04055 Radical SAM superfamily KJA61_09755 PF08448 PAS fold KJA61_09755 PF00990 Diguanylate cyclase, GGDEF domain KJA61_09760 PF01264 Chorismate synthase KJA61_09765 PF05175 Methyltransferase small domain KJA61_09770 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_09780 PF01434 Peptidase family M41 KJA61_09780 PF17862 AAA+ lid domain KJA61_09780 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_09790 PF05166 YcgL domain KJA61_09810 PF00570 HRDC domain KJA61_09810 PF01612 3'-5' exonuclease KJA61_09815 PF02132 RecR protein KJA61_09815 PF13662 Toprim domain KJA61_09820 PF02575 YbaB/EbfC DNA-binding family KJA61_09830 PF01053 Cys/Met metabolism PLP-dependent enzyme KJA61_09835 PF00561 alpha/beta hydrolase fold KJA61_09840 PF08241 Methyltransferase domain KJA61_09870 PF01230 HIT domain KJA61_09905 PF00005 ABC transporter KJA61_09910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_09920 PF02684 Lipid-A-disaccharide synthetase KJA61_09925 PF00593 TonB dependent receptor KJA61_09925 PF07715 TonB-dependent Receptor Plug Domain KJA61_09945 PF01925 Sulfite exporter TauE/SafE KJA61_09950 PF00793 DAHP synthetase I family KJA61_09955 PF02654 Cobalamin-5-phosphate synthase KJA61_09970 PF02277 Phosphoribosyltransferase KJA61_09975 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KJA61_09985 PF13419 Haloacid dehalogenase-like hydrolase KJA61_10010 PF07715 TonB-dependent Receptor Plug Domain KJA61_10010 PF00593 TonB dependent receptor KJA61_10025 PF06276 Ferric iron reductase FhuF-like transporter KJA61_10025 PF04183 IucA / IucC family KJA61_10030 PF06276 Ferric iron reductase FhuF-like transporter KJA61_10030 PF04183 IucA / IucC family KJA61_10035 PF07690 Major Facilitator Superfamily KJA61_10040 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KJA61_10045 PF04183 IucA / IucC family KJA61_10045 PF06276 Ferric iron reductase FhuF-like transporter KJA61_10050 PF04073 Aminoacyl-tRNA editing domain KJA61_10060 PF03109 ABC1 family KJA61_10065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_10065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_10065 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_10070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_10070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_10070 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_10075 PF00487 Fatty acid desaturase KJA61_10080 PF12833 Helix-turn-helix domain KJA61_10080 PF12852 Cupin KJA61_10085 PF00639 PPIC-type PPIASE domain KJA61_10085 PF09312 SurA N-terminal domain KJA61_10090 PF00216 Bacterial DNA-binding protein KJA61_10105 PF02082 Transcriptional regulator KJA61_10110 PF00266 Aminotransferase class-V KJA61_10115 PF01592 NifU-like N terminal domain KJA61_10120 PF01521 Iron-sulphur cluster biosynthesis KJA61_10125 PF00226 DnaJ domain KJA61_10125 PF07743 HSCB C-terminal oligomerisation domain KJA61_10130 PF00012 Hsp70 protein KJA61_10135 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_10140 PF00211 Adenylate and Guanylate cyclase catalytic domain KJA61_10150 PF17757 UvrB interaction domain KJA61_10150 PF00271 Helicase conserved C-terminal domain KJA61_10150 PF00270 DEAD/DEAH box helicase KJA61_10150 PF02559 CarD-like/TRCF domain KJA61_10150 PF03461 TRCF domain KJA61_10170 PF03737 Aldolase/RraA KJA61_10175 PF13460 NAD(P)H-binding KJA61_10180 PF01649 Ribosomal protein S20 KJA61_10190 PF00459 Inositol monophosphatase family KJA61_10205 PF00005 ABC transporter KJA61_10205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJA61_10210 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_10215 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_10220 PF01432 Peptidase family M3 KJA61_10240 PF07715 TonB-dependent Receptor Plug Domain KJA61_10240 PF00593 TonB dependent receptor KJA61_10250 PF01618 MotA/TolQ/ExbB proton channel family KJA61_10255 PF02472 Biopolymer transport protein ExbD/TolR KJA61_10260 PF02472 Biopolymer transport protein ExbD/TolR KJA61_10270 PF01274 Malate synthase KJA61_10275 PF03969 AFG1-like ATPase KJA61_10285 PF00743 Flavin-binding monooxygenase-like KJA61_10295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KJA61_10305 PF00216 Bacterial DNA-binding protein KJA61_10310 PF00575 S1 RNA binding domain KJA61_10315 PF02224 Cytidylate kinase KJA61_10325 PF14437 MafB19-like deaminase KJA61_10335 PF03167 Uracil DNA glycosylase superfamily KJA61_10345 PF03934 Type II secretion system (T2SS), protein K KJA61_10350 PF11612 Type II secretion system (T2SS), protein J KJA61_10350 PF07963 Prokaryotic N-terminal methylation motif KJA61_10355 PF07963 Prokaryotic N-terminal methylation motif KJA61_10355 PF02501 Type II secretion system (T2SS), protein I KJA61_10370 PF01026 TatD related DNase KJA61_10380 PF09115 DNA polymerase III, delta subunit, C terminal KJA61_10385 PF02348 Cytidylyltransferase KJA61_10390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KJA61_10395 PF00005 ABC transporter KJA61_10395 PF00664 ABC transporter transmembrane region KJA61_10405 PF01618 MotA/TolQ/ExbB proton channel family KJA61_10410 PF02195 ParB-like nuclease domain KJA61_10410 PF17762 HTH domain found in ParB protein KJA61_10415 PF13614 AAA domain KJA61_10420 PF02527 rRNA small subunit methyltransferase G KJA61_10425 PF00483 Nucleotidyl transferase KJA61_10430 PF01636 Phosphotransferase enzyme family KJA61_10435 PF04453 LPS transport system D KJA61_10435 PF03968 OstA-like protein KJA61_10440 PF00639 PPIC-type PPIASE domain KJA61_10440 PF09312 SurA N-terminal domain KJA61_10445 PF01116 Fructose-bisphosphate aldolase class-II KJA61_10455 PF00162 Phosphoglycerate kinase KJA61_10465 PF02545 Maf-like protein KJA61_10470 PF08007 Cupin superfamily protein KJA61_10485 PF00375 Sodium:dicarboxylate symporter family KJA61_10490 PF06912 Protein of unknown function (DUF1275) KJA61_10495 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KJA61_10500 PF00664 ABC transporter transmembrane region KJA61_10500 PF00005 ABC transporter KJA61_10510 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KJA61_10510 PF12833 Helix-turn-helix domain KJA61_10515 PF01597 Glycine cleavage H-protein KJA61_10520 PF02146 Sir2 family KJA61_10525 PF00474 Sodium:solute symporter family KJA61_10530 PF01037 Lrp/AsnC ligand binding domain KJA61_10535 PF00171 Aldehyde dehydrogenase family KJA61_10535 PF01619 Proline dehydrogenase KJA61_10535 PF14850 DNA-binding domain of Proline dehydrogenase KJA61_10535 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KJA61_10540 PF04229 GrpB protein KJA61_10545 PF05958 tRNA (Uracil-5-)-methyltransferase KJA61_10555 PF09992 Phosphodiester glycosidase KJA61_10565 PF04264 YceI-like domain KJA61_10575 PF00456 Transketolase, thiamine diphosphate binding domain KJA61_10575 PF02779 Transketolase, pyrimidine binding domain KJA61_10575 PF02780 Transketolase, C-terminal domain KJA61_10580 PF02773 S-adenosylmethionine synthetase, C-terminal domain KJA61_10580 PF02772 S-adenosylmethionine synthetase, central domain KJA61_10580 PF00438 S-adenosylmethionine synthetase, N-terminal domain KJA61_10600 PF00905 Penicillin binding protein transpeptidase domain KJA61_10615 PF02075 Crossover junction endodeoxyribonuclease RuvC KJA61_10620 PF01256 Carbohydrate kinase KJA61_10620 PF03853 YjeF-related protein N-terminus KJA61_10625 PF08331 Domain of unknown function (DUF1730) KJA61_10630 PF06968 Biotin and Thiamin Synthesis associated domain KJA61_10630 PF04055 Radical SAM superfamily KJA61_10645 PF16970 Type-1 fimbrial protein, A KJA61_10650 PF02753 Pili assembly chaperone PapD, C-terminal domain KJA61_10650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KJA61_10655 PF13954 PapC N-terminal domain KJA61_10655 PF13953 PapC C-terminal domain KJA61_10655 PF00577 Outer membrane usher protein KJA61_10675 PF00892 EamA-like transporter family KJA61_10685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KJA61_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_10695 PF03466 LysR substrate binding domain KJA61_10725 PF00440 Bacterial regulatory proteins, tetR family KJA61_10735 PF01709 Transcriptional regulator KJA61_10740 PF01037 Lrp/AsnC ligand binding domain KJA61_10750 PF00005 ABC transporter KJA61_10755 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_10760 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_10775 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA61_10775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_10785 PF00296 Luciferase-like monooxygenase KJA61_10790 PF03180 NLPA lipoprotein KJA61_10795 PF03180 NLPA lipoprotein KJA61_10800 PF09383 NIL domain KJA61_10800 PF00005 ABC transporter KJA61_10805 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_10810 PF06071 Protein of unknown function (DUF933) KJA61_10810 PF01926 50S ribosome-binding GTPase KJA61_10835 PF03591 AzlC protein KJA61_10840 PF05437 Branched-chain amino acid transport protein (AzlD) KJA61_10850 PF02222 ATP-grasp domain KJA61_10855 PF08335 GlnD PII-uridylyltransferase KJA61_10855 PF01966 HD domain KJA61_10855 PF01909 Nucleotidyltransferase domain KJA61_10860 PF00155 Aminotransferase class I and II KJA61_10870 PF12833 Helix-turn-helix domain KJA61_10870 PF12852 Cupin KJA61_10875 PF00255 Glutathione peroxidase KJA61_10880 PF01641 SelR domain KJA61_10885 PF00155 Aminotransferase class I and II KJA61_10890 PF00375 Sodium:dicarboxylate symporter family KJA61_10895 PF00710 Asparaginase, N-terminal KJA61_10895 PF17763 Glutaminase/Asparaginase C-terminal domain KJA61_10900 PF02811 PHP domain KJA61_10900 PF01336 OB-fold nucleic acid binding domain KJA61_10900 PF14579 Helix-hairpin-helix motif KJA61_10900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJA61_10900 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJA61_10905 PF00588 SpoU rRNA Methylase family KJA61_10910 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_10925 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_10925 PF13192 Thioredoxin domain KJA61_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_10940 PF03466 LysR substrate binding domain KJA61_10945 PF01758 Sodium Bile acid symporter family KJA61_10950 PF01022 Bacterial regulatory protein, arsR family KJA61_10955 PF03960 ArsC family KJA61_10965 PF13382 Adenine deaminase C-terminal domain KJA61_10965 PF01979 Amidohydrolase family KJA61_10975 PF03466 LysR substrate binding domain KJA61_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_10985 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KJA61_10990 PF01177 Asp/Glu/Hydantoin racemase KJA61_10995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KJA61_11000 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_11005 PF00005 ABC transporter KJA61_11010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KJA61_11020 PF00083 Sugar (and other) transporter KJA61_11025 PF00296 Luciferase-like monooxygenase KJA61_11030 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA61_11030 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_11030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_11045 PF01654 Cytochrome bd terminal oxidase subunit I KJA61_11050 PF02322 Cytochrome bd terminal oxidase subunit II KJA61_11060 PF00392 Bacterial regulatory proteins, gntR family KJA61_11060 PF00155 Aminotransferase class I and II KJA61_11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11065 PF03466 LysR substrate binding domain KJA61_11080 PF00698 Acyl transferase domain KJA61_11085 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KJA61_11095 PF01039 Carboxyl transferase domain KJA61_11100 PF06857 Malonate decarboxylase delta subunit (MdcD) KJA61_11105 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KJA61_11110 PF16957 Malonate decarboxylase, alpha subunit, transporter KJA61_11115 PF07690 Major Facilitator Superfamily KJA61_11130 PF00392 Bacterial regulatory proteins, gntR family KJA61_11130 PF00155 Aminotransferase class I and II KJA61_11135 PF04172 LrgB-like family KJA61_11140 PF03788 LrgA family KJA61_11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11145 PF03466 LysR substrate binding domain KJA61_11150 PF14834 Glutathione S-transferase, C-terminal domain KJA61_11150 PF02798 Glutathione S-transferase, N-terminal domain KJA61_11155 PF02798 Glutathione S-transferase, N-terminal domain KJA61_11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11160 PF03466 LysR substrate binding domain KJA61_11170 PF00581 Rhodanese-like domain KJA61_11175 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_11185 PF00266 Aminotransferase class-V KJA61_11195 PF01810 LysE type translocator KJA61_11200 PF03466 LysR substrate binding domain KJA61_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA61_11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA61_11220 PF00005 ABC transporter KJA61_11225 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_11230 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_11245 PF00072 Response regulator receiver domain KJA61_11250 PF00072 Response regulator receiver domain KJA61_11250 PF09308 LuxQ, periplasmic KJA61_11250 PF00512 His Kinase A (phospho-acceptor) domain KJA61_11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_11260 PF01037 Lrp/AsnC ligand binding domain KJA61_11260 PF13404 AsnC-type helix-turn-helix domain KJA61_11270 PF00717 Peptidase S24-like KJA61_11295 PF00199 Catalase KJA61_11295 PF06628 Catalase-related immune-responsive KJA61_11295 PF18011 C-terminal domain found in long catalases KJA61_11305 PF02464 Competence-damaged protein KJA61_11305 PF18146 Damage-inducible protein CinA KH domain KJA61_11305 PF00994 Probable molybdopterin binding domain KJA61_11340 PF03466 LysR substrate binding domain KJA61_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11360 PF00501 AMP-binding enzyme KJA61_11360 PF13193 AMP-binding enzyme C-terminal domain KJA61_11365 PF00440 Bacterial regulatory proteins, tetR family KJA61_11370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_11370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_11370 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_11375 PF01039 Carboxyl transferase domain KJA61_11380 PF00378 Enoyl-CoA hydratase/isomerase KJA61_11385 PF02785 Biotin carboxylase C-terminal domain KJA61_11385 PF00289 Biotin carboxylase, N-terminal domain KJA61_11385 PF00364 Biotin-requiring enzyme KJA61_11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_11385 PF18140 Propionyl-coenzyme A carboxylase BT domain KJA61_11390 PF00682 HMGL-like KJA61_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11395 PF03466 LysR substrate binding domain KJA61_11410 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_11410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_11410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_11410 PF12806 Acetyl-CoA dehydrogenase C-terminal like KJA61_11420 PF07690 Major Facilitator Superfamily KJA61_11430 PF01144 Coenzyme A transferase KJA61_11435 PF01144 Coenzyme A transferase KJA61_11440 PF07690 Major Facilitator Superfamily KJA61_11445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_11445 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_11445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_11450 PF00378 Enoyl-CoA hydratase/isomerase KJA61_11460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA61_11460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA61_11460 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KJA61_11465 PF02803 Thiolase, C-terminal domain KJA61_11465 PF00108 Thiolase, N-terminal domain KJA61_11470 PF09339 IclR helix-turn-helix domain KJA61_11475 PF07690 Major Facilitator Superfamily KJA61_11480 PF03060 Nitronate monooxygenase KJA61_11485 PF00378 Enoyl-CoA hydratase/isomerase KJA61_11490 PF09339 IclR helix-turn-helix domain KJA61_11495 PF02515 CoA-transferase family III KJA61_11500 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_11500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_11500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_11505 PF07690 Major Facilitator Superfamily KJA61_11510 PF13419 Haloacid dehalogenase-like hydrolase KJA61_11515 PF00266 Aminotransferase class-V KJA61_11520 PF01266 FAD dependent oxidoreductase KJA61_11525 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_11530 PF00005 ABC transporter KJA61_11530 PF08402 TOBE domain KJA61_11540 PF00392 Bacterial regulatory proteins, gntR family KJA61_11540 PF07702 UTRA domain KJA61_11545 PF01494 FAD binding domain KJA61_11550 PF09339 IclR helix-turn-helix domain KJA61_11550 PF01614 Bacterial transcriptional regulator KJA61_11555 PF02525 Flavodoxin-like fold KJA61_11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11560 PF03466 LysR substrate binding domain KJA61_11565 PF02627 Carboxymuconolactone decarboxylase family KJA61_11570 PF00171 Aldehyde dehydrogenase family KJA61_11580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KJA61_11590 PF00171 Aldehyde dehydrogenase family KJA61_11595 PF00296 Luciferase-like monooxygenase KJA61_11600 PF01613 Flavin reductase like domain KJA61_11605 PF12697 Alpha/beta hydrolase family KJA61_11625 PF01292 Prokaryotic cytochrome b561 KJA61_11630 PF00199 Catalase KJA61_11665 PF03061 Thioesterase superfamily KJA61_11670 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_11675 PF07848 PaaX-like protein KJA61_11675 PF08223 PaaX-like protein C-terminal domain KJA61_11680 PF00501 AMP-binding enzyme KJA61_11680 PF14535 AMP-binding enzyme C-terminal domain KJA61_11685 PF02803 Thiolase, C-terminal domain KJA61_11685 PF00108 Thiolase, N-terminal domain KJA61_11690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA61_11690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA61_11690 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KJA61_11695 PF00378 Enoyl-CoA hydratase/isomerase KJA61_11700 PF00378 Enoyl-CoA hydratase/isomerase KJA61_11705 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_11705 PF00970 Oxidoreductase FAD-binding domain KJA61_11705 PF00175 Oxidoreductase NAD-binding domain KJA61_11710 PF01883 Iron-sulfur cluster assembly protein KJA61_11715 PF05138 Phenylacetic acid catabolic protein KJA61_11720 PF06243 Phenylacetic acid degradation B KJA61_11725 PF05138 Phenylacetic acid catabolic protein KJA61_11730 PF00171 Aldehyde dehydrogenase family KJA61_11730 PF01575 MaoC like domain KJA61_11735 PF03313 Serine dehydratase alpha chain KJA61_11735 PF03315 Serine dehydratase beta chain KJA61_11740 PF13520 Amino acid permease KJA61_11745 PF00171 Aldehyde dehydrogenase family KJA61_11750 PF00083 Sugar (and other) transporter KJA61_11760 PF04324 BFD-like [2Fe-2S] binding domain KJA61_11760 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_11770 PF01266 FAD dependent oxidoreductase KJA61_11775 PF05544 Proline racemase KJA61_11780 PF00392 Bacterial regulatory proteins, gntR family KJA61_11790 PF00701 Dihydrodipicolinate synthetase family KJA61_11800 PF09278 MerR, DNA binding KJA61_11800 PF00376 MerR family regulatory protein KJA61_11815 PF02677 Epoxyqueuosine reductase QueH KJA61_11830 PF07690 Major Facilitator Superfamily KJA61_11835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KJA61_11845 PF03466 LysR substrate binding domain KJA61_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_11865 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KJA61_11870 PF06812 ImpA, N-terminal, type VI secretion system KJA61_11875 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_11875 PF17871 AAA lid domain KJA61_11875 PF10431 C-terminal, D2-small domain, of ClpB protein KJA61_11875 PF07724 AAA domain (Cdc48 subfamily) KJA61_11885 PF00691 OmpA family KJA61_11885 PF01389 OmpA-like transmembrane domain KJA61_11895 PF14331 ImcF-related N-terminal domain KJA61_11895 PF06761 Intracellular multiplication and human macrophage-killing KJA61_11895 PF06744 Type VI secretion protein IcmF C-terminal KJA61_11910 PF05947 Type VI secretion system, TssF KJA61_11925 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KJA61_11950 PF00005 ABC transporter KJA61_11955 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJA61_11960 PF01425 Amidase KJA61_11965 PF01402 Ribbon-helix-helix protein, copG family KJA61_11965 PF08753 NikR C terminal nickel binding domain KJA61_11985 PF02525 Flavodoxin-like fold KJA61_11990 PF02785 Biotin carboxylase C-terminal domain KJA61_11990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_11990 PF00289 Biotin carboxylase, N-terminal domain KJA61_12005 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_12005 PF13823 Alcohol dehydrogenase GroES-associated KJA61_12005 PF00107 Zinc-binding dehydrogenase KJA61_12015 PF00440 Bacterial regulatory proteins, tetR family KJA61_12035 PF00654 Voltage gated chloride channel KJA61_12040 PF00289 Biotin carboxylase, N-terminal domain KJA61_12040 PF00364 Biotin-requiring enzyme KJA61_12040 PF02785 Biotin carboxylase C-terminal domain KJA61_12040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJA61_12050 PF07286 Protein of unknown function (DUF1445) KJA61_12055 PF03746 LamB/YcsF family KJA61_12060 PF01566 Natural resistance-associated macrophage protein KJA61_12065 PF03466 LysR substrate binding domain KJA61_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_12080 PF03527 RHS protein KJA61_12080 PF05593 RHS Repeat KJA61_12085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KJA61_12085 PF04717 Type VI secretion system, phage-baseplate injector KJA61_12085 PF13296 Putative type VI secretion system Rhs element Vgr KJA61_12095 PF13419 Haloacid dehalogenase-like hydrolase KJA61_12115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA61_12115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA61_12135 PF07690 Major Facilitator Superfamily KJA61_12145 PF03279 Bacterial lipid A biosynthesis acyltransferase KJA61_12150 PF00990 Diguanylate cyclase, GGDEF domain KJA61_12150 PF03707 Bacterial signalling protein N terminal repeat KJA61_12150 PF00563 EAL domain KJA61_12155 PF00892 EamA-like transporter family KJA61_12160 PF01037 Lrp/AsnC ligand binding domain KJA61_12165 PF01624 MutS domain I KJA61_12165 PF05188 MutS domain II KJA61_12165 PF05192 MutS domain III KJA61_12165 PF05190 MutS family domain IV KJA61_12165 PF00488 MutS domain V KJA61_12175 PF00037 4Fe-4S binding domain KJA61_12175 PF11953 Domain of unknown function (DUF3470) KJA61_12185 PF01596 O-methyltransferase KJA61_12195 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_12200 PF01205 Uncharacterized protein family UPF0029 KJA61_12220 PF00005 ABC transporter KJA61_12220 PF00664 ABC transporter transmembrane region KJA61_12220 PF03412 Peptidase C39 family KJA61_12225 PF02321 Outer membrane efflux protein KJA61_12230 PF00005 ABC transporter KJA61_12230 PF12399 Branched-chain amino acid ATP-binding cassette transporter KJA61_12235 PF03968 OstA-like protein KJA61_12250 PF01380 SIS domain KJA61_12250 PF00571 CBS domain KJA61_12255 PF09190 DALR domain KJA61_12255 PF01406 tRNA synthetases class I (C) catalytic domain KJA61_12280 PF01638 HxlR-like helix-turn-helix KJA61_12285 PF07690 Major Facilitator Superfamily KJA61_12310 PF03807 NADP oxidoreductase coenzyme F420-dependent KJA61_12310 PF14748 Pyrroline-5-carboxylate reductase dimerisation KJA61_12320 PF00313 'Cold-shock' DNA-binding domain KJA61_12325 PF01810 LysE type translocator KJA61_12355 PF02601 Exonuclease VII, large subunit KJA61_12355 PF13742 OB-fold nucleic acid binding domain KJA61_12390 PF00376 MerR family regulatory protein KJA61_12390 PF09278 MerR, DNA binding KJA61_12395 PF00403 Heavy-metal-associated domain KJA61_12400 PF00403 Heavy-metal-associated domain KJA61_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_12405 PF03466 LysR substrate binding domain KJA61_12410 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KJA61_12410 PF00355 Rieske [2Fe-2S] domain KJA61_12415 PF00866 Ring hydroxylating beta subunit KJA61_12420 PF00175 Oxidoreductase NAD-binding domain KJA61_12420 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_12420 PF00970 Oxidoreductase FAD-binding domain KJA61_12425 PF00106 short chain dehydrogenase KJA61_12430 PF03594 Benzoate membrane transport protein KJA61_12435 PF07690 Major Facilitator Superfamily KJA61_12445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KJA61_12445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJA61_12450 PF11898 Domain of unknown function (DUF3418) KJA61_12450 PF00270 DEAD/DEAH box helicase KJA61_12450 PF00271 Helicase conserved C-terminal domain KJA61_12450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KJA61_12450 PF04408 Helicase associated domain (HA2) KJA61_12455 PF00578 AhpC/TSA family KJA61_12455 PF10417 C-terminal domain of 1-Cys peroxiredoxin KJA61_12475 PF13192 Thioredoxin domain KJA61_12475 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_12485 PF02798 Glutathione S-transferase, N-terminal domain KJA61_12485 PF00043 Glutathione S-transferase, C-terminal domain KJA61_12495 PF02390 Putative methyltransferase KJA61_12500 PF13417 Glutathione S-transferase, N-terminal domain KJA61_12500 PF00043 Glutathione S-transferase, C-terminal domain KJA61_12510 PF13488 Glycine zipper KJA61_12510 PF00691 OmpA family KJA61_12515 PF01979 Amidohydrolase family KJA61_12520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJA61_12520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJA61_12530 PF01170 Putative RNA methylase family UPF0020 KJA61_12530 PF02926 THUMP domain KJA61_12530 PF10672 S-adenosylmethionine-dependent methyltransferase KJA61_12545 PF10431 C-terminal, D2-small domain, of ClpB protein KJA61_12545 PF02861 Clp amino terminal domain, pathogenicity island component KJA61_12545 PF17871 AAA lid domain KJA61_12545 PF07724 AAA domain (Cdc48 subfamily) KJA61_12545 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_12560 PF02566 OsmC-like protein KJA61_12570 PF00027 Cyclic nucleotide-binding domain KJA61_12570 PF13545 Crp-like helix-turn-helix domain KJA61_12580 PF00248 Aldo/keto reductase family KJA61_12595 PF00709 Adenylosuccinate synthetase KJA61_12600 PF13393 Histidyl-tRNA synthetase KJA61_12605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KJA61_12605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KJA61_12610 PF01411 tRNA synthetases class II (A) KJA61_12610 PF02272 DHHA1 domain KJA61_12610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJA61_12615 PF00696 Amino acid kinase family KJA61_12615 PF01842 ACT domain KJA61_12615 PF13840 ACT domain KJA61_12620 PF02599 Global regulator protein family KJA61_12625 PF01351 Ribonuclease HII KJA61_12635 PF01292 Prokaryotic cytochrome b561 KJA61_12640 PF00962 Adenosine/AMP deaminase KJA61_12645 PF00860 Permease family KJA61_12655 PF00743 Flavin-binding monooxygenase-like KJA61_12660 PF00106 short chain dehydrogenase KJA61_12670 PF02678 Pirin KJA61_12670 PF17954 Quercetinase C-terminal cupin domain KJA61_12675 PF00440 Bacterial regulatory proteins, tetR family KJA61_12675 PF17932 Tetracyclin repressor-like, C-terminal domain KJA61_12685 PF00106 short chain dehydrogenase KJA61_12695 PF13610 DDE domain KJA61_12705 PF13610 DDE domain KJA61_12720 PF00809 Pterin binding enzyme KJA61_12725 PF00893 Small Multidrug Resistance protein KJA61_12730 PF13427 Domain of unknown function (DUF4111) KJA61_12730 PF01909 Nucleotidyltransferase domain KJA61_12750 PF00583 Acetyltransferase (GNAT) family KJA61_12755 PF13495 Phage integrase, N-terminal SAM-like domain KJA61_12755 PF00589 Phage integrase family KJA61_12760 PF11809 Domain of unknown function (DUF3330) KJA61_12760 PF00563 EAL domain KJA61_12770 PF13610 DDE domain KJA61_12775 PF01636 Phosphotransferase enzyme family KJA61_12790 PF13610 DDE domain KJA61_12795 PF02796 Helix-turn-helix domain of resolvase KJA61_12795 PF00239 Resolvase, N terminal domain KJA61_12805 PF13610 DDE domain KJA61_12815 PF02796 Helix-turn-helix domain of resolvase KJA61_12815 PF00239 Resolvase, N terminal domain KJA61_12820 PF13610 DDE domain KJA61_12825 PF00324 Amino acid permease KJA61_12830 PF04958 Arginine N-succinyltransferase beta subunit KJA61_12835 PF00202 Aminotransferase class-III KJA61_12845 PF00171 Aldehyde dehydrogenase family KJA61_12855 PF00392 Bacterial regulatory proteins, gntR family KJA61_12855 PF07729 FCD domain KJA61_12865 PF00324 Amino acid permease KJA61_12870 PF01266 FAD dependent oxidoreductase KJA61_12875 PF00324 Amino acid permease KJA61_12915 PF03527 RHS protein KJA61_12915 PF05593 RHS Repeat KJA61_12920 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KJA61_12920 PF04717 Type VI secretion system, phage-baseplate injector KJA61_12920 PF13296 Putative type VI secretion system Rhs element Vgr KJA61_12940 PF03180 NLPA lipoprotein KJA61_12945 PF05987 Bacterial protein of unknown function (DUF898) KJA61_12960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_12960 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_12965 PF00764 Arginosuccinate synthase KJA61_12970 PF00360 Phytochrome region KJA61_12970 PF00990 Diguanylate cyclase, GGDEF domain KJA61_12970 PF01590 GAF domain KJA61_12970 PF00563 EAL domain KJA61_12975 PF01979 Amidohydrolase family KJA61_12980 PF00929 Exonuclease KJA61_12990 PF07715 TonB-dependent Receptor Plug Domain KJA61_12990 PF00593 TonB dependent receptor KJA61_12995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_12995 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_13000 PF00005 ABC transporter KJA61_13000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJA61_13005 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_13005 PF12911 N-terminal TM domain of oligopeptide transport permease C KJA61_13010 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_13015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJA61_13020 PF01464 Transglycosylase SLT domain KJA61_13020 PF01476 LysM domain KJA61_13020 PF01476 LysM domain KJA61_13020 PF01464 Transglycosylase SLT domain KJA61_13025 PF00929 Exonuclease KJA61_13035 PF09297 NADH pyrophosphatase zinc ribbon domain KJA61_13035 PF00293 NUDIX domain KJA61_13045 PF04972 BON domain KJA61_13050 PF02021 Uncharacterised protein family UPF0102 KJA61_13055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJA61_13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_13065 PF03466 LysR substrate binding domain KJA61_13070 PF01810 LysE type translocator KJA61_13080 PF13411 MerR HTH family regulatory protein KJA61_13090 PF01494 FAD binding domain KJA61_13095 PF01494 FAD binding domain KJA61_13100 PF05195 Aminopeptidase P, N-terminal domain KJA61_13100 PF00557 Metallopeptidase family M24 KJA61_13140 PF08019 Phosphoethanolamine transferase EptA/EptB KJA61_13140 PF00884 Sulfatase KJA61_13185 PF01551 Peptidase family M23 KJA61_13185 PF08525 Opacity-associated protein A N-terminal motif KJA61_13185 PF01476 LysM domain KJA61_13510 PF01812 5-formyltetrahydrofolate cyclo-ligase family KJA61_13515 PF00691 OmpA family KJA61_13515 PF04355 SmpA / OmlA family KJA61_13520 PF13018 Extended Signal Peptide of Type V secretion system KJA61_13520 PF03895 YadA-like membrane anchor domain KJA61_13520 PF05662 Coiled stalk of trimeric autotransporter adhesin KJA61_13520 PF05658 Head domain of trimeric autotransporter adhesin KJA61_13525 PF00004 ATPase family associated with various cellular activities (AAA) KJA61_13525 PF05362 Lon protease (S16) C-terminal proteolytic domain KJA61_13525 PF02190 ATP-dependent protease La (LON) substrate-binding domain KJA61_13530 PF02590 Predicted SPOUT methyltransferase KJA61_13535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KJA61_13545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KJA61_13545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KJA61_13550 PF04060 Putative Fe-S cluster KJA61_13555 PF10576 Iron-sulfur binding domain of endonuclease III KJA61_13555 PF00730 HhH-GPD superfamily base excision DNA repair protein KJA61_13555 PF00633 Helix-hairpin-helix motif KJA61_13565 PF05191 Adenylate kinase, active site lid KJA61_13580 PF00905 Penicillin binding protein transpeptidase domain KJA61_13580 PF03717 Penicillin-binding Protein dimerisation domain KJA61_13595 PF02492 CobW/HypB/UreG, nucleotide-binding domain KJA61_13600 PF01730 UreF KJA61_13605 PF05194 UreE urease accessory protein, C-terminal domain KJA61_13605 PF02814 UreE urease accessory protein, N-terminal domain KJA61_13615 PF00547 Urease, gamma subunit KJA61_13620 PF01774 UreD urease accessory protein KJA61_13635 PF00463 Isocitrate lyase family KJA61_13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_13640 PF03466 LysR substrate binding domain KJA61_13645 PF00571 CBS domain KJA61_13645 PF03471 Transporter associated domain KJA61_13645 PF01595 Cyclin M transmembrane N-terminal domain KJA61_13650 PF03600 Citrate transporter KJA61_13665 PF00009 Elongation factor Tu GTP binding domain KJA61_13670 PF01507 Phosphoadenosine phosphosulfate reductase family KJA61_13680 PF14052 Capsule assembly protein Wzi KJA61_13685 PF00152 tRNA synthetases class II (D, K and N) KJA61_13685 PF01336 OB-fold nucleic acid binding domain KJA61_13700 PF00301 Rubredoxin KJA61_13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_13705 PF18113 Rubredoxin binding C-terminal domain KJA61_13710 PF00561 alpha/beta hydrolase fold KJA61_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_13715 PF03466 LysR substrate binding domain KJA61_13725 PF02503 Polyphosphate kinase middle domain KJA61_13725 PF13090 Polyphosphate kinase C-terminal domain 2 KJA61_13725 PF17941 Polyphosphate kinase C-terminal domain 1 KJA61_13725 PF13089 Polyphosphate kinase N-terminal domain KJA61_13730 PF00912 Transglycosylase KJA61_13735 PF01694 Rhomboid family KJA61_13745 PF00005 ABC transporter KJA61_13750 PF13472 GDSL-like Lipase/Acylhydrolase family KJA61_13755 PF00484 Carbonic anhydrase KJA61_13760 PF00561 alpha/beta hydrolase fold KJA61_13770 PF07715 TonB-dependent Receptor Plug Domain KJA61_13770 PF00593 TonB dependent receptor KJA61_13775 PF01521 Iron-sulphur cluster biosynthesis KJA61_13775 PF01106 NifU-like domain KJA61_13785 PF00884 Sulfatase KJA61_13790 PF03781 Sulfatase-modifying factor enzyme 1 KJA61_13805 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_13810 PF01384 Phosphate transporter family KJA61_13815 PF02965 Vitamin B12 dependent methionine synthase, activation domain KJA61_13815 PF00809 Pterin binding enzyme KJA61_13815 PF02574 Homocysteine S-methyltransferase KJA61_13815 PF02607 B12 binding domain KJA61_13815 PF02310 B12 binding domain KJA61_13820 PF02779 Transketolase, pyrimidine binding domain KJA61_13820 PF02780 Transketolase, C-terminal domain KJA61_13825 PF00456 Transketolase, thiamine diphosphate binding domain KJA61_13830 PF07690 Major Facilitator Superfamily KJA61_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_13840 PF03466 LysR substrate binding domain KJA61_13850 PF01263 Aldose 1-epimerase KJA61_13855 PF07690 Major Facilitator Superfamily KJA61_13860 PF12833 Helix-turn-helix domain KJA61_13860 PF02311 AraC-like ligand binding domain KJA61_13865 PF04960 Glutaminase KJA61_13870 PF01327 Polypeptide deformylase KJA61_13875 PF07690 Major Facilitator Superfamily KJA61_13885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KJA61_13885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJA61_13885 PF00205 Thiamine pyrophosphate enzyme, central domain KJA61_13890 PF00171 Aldehyde dehydrogenase family KJA61_13895 PF01958 Domain of unknown function DUF108 KJA61_13895 PF03447 Homoserine dehydrogenase, NAD binding domain KJA61_13905 PF12697 Alpha/beta hydrolase family KJA61_13915 PF07690 Major Facilitator Superfamily KJA61_13920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_13920 PF14759 Reductase C-terminal KJA61_13925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KJA61_13935 PF00355 Rieske [2Fe-2S] domain KJA61_13945 PF00355 Rieske [2Fe-2S] domain KJA61_13950 PF09339 IclR helix-turn-helix domain KJA61_13950 PF01614 Bacterial transcriptional regulator KJA61_13965 PF00378 Enoyl-CoA hydratase/isomerase KJA61_13975 PF00535 Glycosyl transferase family 2 KJA61_13980 PF01522 Polysaccharide deacetylase KJA61_13980 PF14883 Hypothetical glycosyl hydrolase family 13 KJA61_13985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_13990 PF07152 YaeQ protein KJA61_13995 PF00375 Sodium:dicarboxylate symporter family KJA61_14000 PF02492 CobW/HypB/UreG, nucleotide-binding domain KJA61_14000 PF07683 Cobalamin synthesis protein cobW C-terminal domain KJA61_14010 PF03061 Thioesterase superfamily KJA61_14020 PF02028 BCCT, betaine/carnitine/choline family transporter KJA61_14025 PF02028 BCCT, betaine/carnitine/choline family transporter KJA61_14030 PF13977 BetI-type transcriptional repressor, C-terminal KJA61_14030 PF00440 Bacterial regulatory proteins, tetR family KJA61_14035 PF00171 Aldehyde dehydrogenase family KJA61_14040 PF05199 GMC oxidoreductase KJA61_14040 PF00732 GMC oxidoreductase KJA61_14045 PF06039 Malate:quinone oxidoreductase (Mqo) KJA61_14055 PF02574 Homocysteine S-methyltransferase KJA61_14060 PF13520 Amino acid permease KJA61_14085 PF00701 Dihydrodipicolinate synthetase family KJA61_14090 PF00083 Sugar (and other) transporter KJA61_14135 PF00717 Peptidase S24-like KJA61_14140 PF13438 Domain of unknown function (DUF4113) KJA61_14140 PF00817 impB/mucB/samB family KJA61_14140 PF11799 impB/mucB/samB family C-terminal domain KJA61_14140 PF11798 IMS family HHH motif KJA61_14225 PF00712 DNA polymerase III beta subunit, N-terminal domain KJA61_14225 PF02767 DNA polymerase III beta subunit, central domain KJA61_14225 PF02768 DNA polymerase III beta subunit, C-terminal domain KJA61_14265 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KJA61_14455 PF00929 Exonuclease KJA61_14495 PF07690 Major Facilitator Superfamily KJA61_14500 PF13533 Biotin-lipoyl like KJA61_14505 PF03061 Thioesterase superfamily KJA61_14510 PF00490 Delta-aminolevulinic acid dehydratase KJA61_14515 PF01266 FAD dependent oxidoreductase KJA61_14520 PF08338 Domain of unknown function (DUF1731) KJA61_14520 PF01370 NAD dependent epimerase/dehydratase family KJA61_14540 PF00149 Calcineurin-like phosphoesterase KJA61_14540 PF12320 Type 5 capsule protein repressor C-terminal domain KJA61_14550 PF01168 Alanine racemase, N-terminal domain KJA61_14555 PF00437 Type II/IV secretion system protein KJA61_14560 PF00437 Type II/IV secretion system protein KJA61_14565 PF01475 Ferric uptake regulator family KJA61_14570 PF04355 SmpA / OmlA family KJA61_14575 PF03658 RnfH family Ubiquitin KJA61_14585 PF01814 Hemerythrin HHE cation binding domain KJA61_14590 PF13230 Glutamine amidotransferases class-II KJA61_14600 PF00696 Amino acid kinase family KJA61_14605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA61_14605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA61_14605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA61_14605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA61_14610 PF00692 dUTPase KJA61_14615 PF13361 UvrD-like helicase C-terminal domain KJA61_14615 PF00580 UvrD/REP helicase N-terminal domain KJA61_14620 PF13488 Glycine zipper KJA61_14620 PF00691 OmpA family KJA61_14625 PF01553 Acyltransferase KJA61_14635 PF03775 Septum formation inhibitor MinC, C-terminal domain KJA61_14640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KJA61_14645 PF03776 Septum formation topological specificity factor MinE KJA61_14665 PF01810 LysE type translocator KJA61_14670 PF17854 FtsK alpha domain KJA61_14670 PF09397 Ftsk gamma domain KJA61_14670 PF01580 FtsK/SpoIIIE family KJA61_14670 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KJA61_14675 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJA61_14680 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KJA61_14685 PF04376 Arginine-tRNA-protein transferase, N terminus KJA61_14685 PF04377 Arginine-tRNA-protein transferase, C terminus KJA61_14690 PF00583 Acetyltransferase (GNAT) family KJA61_14705 PF00009 Elongation factor Tu GTP binding domain KJA61_14705 PF03143 Elongation factor Tu C-terminal domain KJA61_14705 PF03144 Elongation factor Tu domain 2 KJA61_14710 PF00679 Elongation factor G C-terminus KJA61_14710 PF14492 Elongation Factor G, domain II KJA61_14710 PF03764 Elongation factor G, domain IV KJA61_14710 PF00009 Elongation factor Tu GTP binding domain KJA61_14710 PF03144 Elongation factor Tu domain 2 KJA61_14715 PF00177 Ribosomal protein S7p/S5e KJA61_14720 PF00164 Ribosomal protein S12/S23 KJA61_14730 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_14730 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_14735 PF03653 Uncharacterised protein family (UPF0093) KJA61_14740 PF02678 Pirin KJA61_14740 PF05726 Pirin C-terminal cupin domain KJA61_14750 PF02540 NAD synthase KJA61_14750 PF00795 Carbon-nitrogen hydrolase KJA61_14765 PF00175 Oxidoreductase NAD-binding domain KJA61_14765 PF00111 2Fe-2S iron-sulfur cluster binding domain KJA61_14765 PF00970 Oxidoreductase FAD-binding domain KJA61_14770 PF00171 Aldehyde dehydrogenase family KJA61_14775 PF00355 Rieske [2Fe-2S] domain KJA61_14775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KJA61_14780 PF07859 alpha/beta hydrolase fold KJA61_14785 PF02028 BCCT, betaine/carnitine/choline family transporter KJA61_14790 PF00180 Isocitrate/isopropylmalate dehydrogenase KJA61_14795 PF03466 LysR substrate binding domain KJA61_14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_14815 PF00037 4Fe-4S binding domain KJA61_14820 PF01467 Cytidylyltransferase-like KJA61_14825 PF01668 SmpB protein KJA61_14830 PF03358 NADPH-dependent FMN reductase KJA61_14835 PF02578 Multi-copper polyphenol oxidoreductase laccase KJA61_14840 PF01479 S4 domain KJA61_14840 PF00849 RNA pseudouridylate synthase KJA61_14845 PF13525 Outer membrane lipoprotein KJA61_14850 PF10410 DnaB-helicase binding domain of primase KJA61_14850 PF08278 DNA primase DnaG DnaB-binding KJA61_14850 PF08275 DNA primase catalytic core, N-terminal domain KJA61_14850 PF01807 CHC2 zinc finger KJA61_14855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KJA61_14855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KJA61_14855 PF01488 Shikimate / quinate 5-dehydrogenase KJA61_14865 PF03550 Outer membrane lipoprotein LolB KJA61_14870 PF08544 GHMP kinases C terminal KJA61_14870 PF00288 GHMP kinases N terminal domain KJA61_14895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KJA61_14895 PF14572 Phosphoribosyl synthetase-associated domain KJA61_14900 PF01386 Ribosomal L25p family KJA61_14905 PF01195 Peptidyl-tRNA hydrolase KJA61_14910 PF02261 Aspartate decarboxylase KJA61_14925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KJA61_14935 PF03070 TENA/THI-4/PQQC family KJA61_14935 PF08543 Phosphomethylpyrimidine kinase KJA61_14935 PF02581 Thiamine monophosphate synthase KJA61_14940 PF04972 BON domain KJA61_14940 PF01476 LysM domain KJA61_14945 PF00550 Phosphopantetheine attachment site KJA61_14955 PF00698 Acyl transferase domain KJA61_14960 PF01783 Ribosomal L32p protein family KJA61_14965 PF02620 Large ribosomal RNA subunit accumulation protein YceD KJA61_14970 PF04315 Elongation factor P hydroxylase KJA61_14975 PF01300 Telomere recombination KJA61_14980 PF02616 Segregation and condensation protein ScpA KJA61_14985 PF04079 Segregation and condensation complex subunit ScpB KJA61_14990 PF00849 RNA pseudouridylate synthase KJA61_14990 PF01479 S4 domain KJA61_15005 PF00155 Aminotransferase class I and II KJA61_15010 PF04055 Radical SAM superfamily KJA61_15010 PF00202 Aminotransferase class-III KJA61_15010 PF06968 Biotin and Thiamin Synthesis associated domain KJA61_15015 PF12697 Alpha/beta hydrolase family KJA61_15015 PF08241 Methyltransferase domain KJA61_15020 PF02358 Trehalose-phosphatase KJA61_15025 PF00982 Glycosyltransferase family 20 KJA61_15030 PF07690 Major Facilitator Superfamily KJA61_15035 PF00210 Ferritin-like domain KJA61_15040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KJA61_15040 PF12826 Helix-hairpin-helix motif KJA61_15040 PF01653 NAD-dependent DNA ligase adenylation domain KJA61_15040 PF00533 BRCA1 C Terminus (BRCT) domain KJA61_15040 PF03120 NAD-dependent DNA ligase OB-fold domain KJA61_15050 PF02463 RecF/RecN/SMC N terminal domain KJA61_15050 PF06470 SMC proteins Flexible Hinge Domain KJA61_15060 PF01925 Sulfite exporter TauE/SafE KJA61_15070 PF03309 Type III pantothenate kinase KJA61_15075 PF00448 SRP54-type protein, GTPase domain KJA61_15075 PF02881 SRP54-type protein, helical bundle domain KJA61_15075 PF02978 Signal peptide binding domain KJA61_15085 PF01207 Dihydrouridine synthase (Dus) KJA61_15115 PF00692 dUTPase KJA61_15130 PF01048 Phosphorylase superfamily KJA61_15135 PF10609 NUBPL iron-transfer P-loop NTPase KJA61_15145 PF09334 tRNA synthetases class I (M) KJA61_15145 PF01588 Putative tRNA binding domain KJA61_15170 PF13533 Biotin-lipoyl like KJA61_15175 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_15190 PF05552 Conserved TM helix KJA61_15205 PF00175 Oxidoreductase NAD-binding domain KJA61_15205 PF00970 Oxidoreductase FAD-binding domain KJA61_15210 PF03466 LysR substrate binding domain KJA61_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_15215 PF00313 'Cold-shock' DNA-binding domain KJA61_15225 PF00361 Proton-conducting membrane transporter KJA61_15230 PF00361 Proton-conducting membrane transporter KJA61_15235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJA61_15235 PF00361 Proton-conducting membrane transporter KJA61_15240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KJA61_15245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KJA61_15250 PF12838 4Fe-4S dicluster domain KJA61_15255 PF00146 NADH dehydrogenase KJA61_15260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KJA61_15260 PF00384 Molybdopterin oxidoreductase KJA61_15260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KJA61_15265 PF10531 SLBB domain KJA61_15265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KJA61_15265 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KJA61_15275 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KJA61_15275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KJA61_15280 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KJA61_15285 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KJA61_15290 PF17151 Periplasmic sensor domain KJA61_15290 PF00990 Diguanylate cyclase, GGDEF domain KJA61_15300 PF00672 HAMP domain KJA61_15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_15300 PF00512 His Kinase A (phospho-acceptor) domain KJA61_15305 PF00072 Response regulator receiver domain KJA61_15305 PF00486 Transcriptional regulatory protein, C terminal KJA61_15315 PF03477 ATP cone domain KJA61_15315 PF02867 Ribonucleotide reductase, barrel domain KJA61_15315 PF00317 Ribonucleotide reductase, all-alpha domain KJA61_15325 PF00268 Ribonucleotide reductase, small chain KJA61_15335 PF00672 HAMP domain KJA61_15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_15335 PF13756 Stimulus-sensing domain KJA61_15335 PF13755 Sensor N-terminal transmembrane domain KJA61_15335 PF00512 His Kinase A (phospho-acceptor) domain KJA61_15405 PF13360 PQQ-like domain KJA61_15405 PF01011 PQQ enzyme repeat KJA61_15430 PF02567 Phenazine biosynthesis-like protein KJA61_15450 PF01613 Flavin reductase like domain KJA61_15455 PF01717 Cobalamin-independent synthase, Catalytic domain KJA61_15455 PF08267 Cobalamin-independent synthase, N-terminal domain KJA61_15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_15465 PF03466 LysR substrate binding domain KJA61_15470 PF01810 LysE type translocator KJA61_15480 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KJA61_15480 PF12833 Helix-turn-helix domain KJA61_15485 PF07687 Peptidase dimerisation domain KJA61_15485 PF01546 Peptidase family M20/M25/M40 KJA61_15495 PF03466 LysR substrate binding domain KJA61_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_15500 PF07690 Major Facilitator Superfamily KJA61_15510 PF03466 LysR substrate binding domain KJA61_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_15515 PF14537 Cytochrome c3 KJA61_15515 PF00890 FAD binding domain KJA61_15525 PF02515 CoA-transferase family III KJA61_15530 PF07690 Major Facilitator Superfamily KJA61_15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_15535 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_15540 PF03466 LysR substrate binding domain KJA61_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_15545 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_15545 PF00107 Zinc-binding dehydrogenase KJA61_15550 PF00962 Adenosine/AMP deaminase KJA61_15575 PF02445 Quinolinate synthetase A protein KJA61_15580 PF01960 ArgJ family KJA61_15585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJA61_15585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KJA61_15590 PF00893 Small Multidrug Resistance protein KJA61_15600 PF05275 Copper resistance protein B precursor (CopB) KJA61_15605 PF07732 Multicopper oxidase KJA61_15605 PF00394 Multicopper oxidase KJA61_15605 PF07731 Multicopper oxidase KJA61_15620 PF00834 Ribulose-phosphate 3 epimerase family KJA61_15630 PF00756 Putative esterase KJA61_15640 PF04445 Putative SAM-dependent methyltransferase KJA61_15645 PF00814 Glycoprotease family KJA61_15650 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_15655 PF00293 NUDIX domain KJA61_15695 PF00425 chorismate binding enzyme KJA61_15695 PF04715 Anthranilate synthase component I, N terminal region KJA61_15700 PF00155 Aminotransferase class I and II KJA61_15705 PF00815 Histidinol dehydrogenase KJA61_15710 PF01634 ATP phosphoribosyltransferase KJA61_15715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJA61_15720 PF01722 BolA-like protein KJA61_15725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KJA61_15730 PF04963 Sigma-54 factor, core binding domain KJA61_15730 PF00309 Sigma-54 factor, Activator interacting domain (AID) KJA61_15730 PF04552 Sigma-54, DNA binding domain KJA61_15775 PF00795 Carbon-nitrogen hydrolase KJA61_15785 PF01047 MarR family KJA61_15790 PF02566 OsmC-like protein KJA61_15795 PF00437 Type II/IV secretion system protein KJA61_15815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KJA61_15815 PF01612 3'-5' exonuclease KJA61_15815 PF01367 5'-3' exonuclease, C-terminal SAM fold KJA61_15815 PF00476 DNA polymerase family A KJA61_15820 PF02325 YGGT family KJA61_15825 PF03807 NADP oxidoreductase coenzyme F420-dependent KJA61_15825 PF14748 Pyrroline-5-carboxylate reductase dimerisation KJA61_15830 PF01171 PP-loop family KJA61_15830 PF09179 TilS substrate binding domain KJA61_15830 PF11734 TilS substrate C-terminal domain KJA61_15835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KJA61_15840 PF02541 Ppx/GppA phosphatase family KJA61_15845 PF00085 Thioredoxin KJA61_15850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA61_15850 PF07498 Rho termination factor, N-terminal domain KJA61_15850 PF07497 Rho termination factor, RNA-binding domain KJA61_15865 PF00216 Bacterial DNA-binding protein KJA61_15870 PF01588 Putative tRNA binding domain KJA61_15870 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KJA61_15870 PF03484 tRNA synthetase B5 domain KJA61_15870 PF03147 Ferredoxin-fold anticodon binding domain KJA61_15870 PF03483 B3/4 domain KJA61_15875 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KJA61_15875 PF01409 tRNA synthetases class II core domain (F) KJA61_15895 PF00453 Ribosomal protein L20 KJA61_15900 PF01632 Ribosomal protein L35 KJA61_15905 PF07690 Major Facilitator Superfamily KJA61_15910 PF09335 SNARE associated Golgi protein KJA61_15915 PF00043 Glutathione S-transferase, C-terminal domain KJA61_15915 PF02798 Glutathione S-transferase, N-terminal domain KJA61_15920 PF00707 Translation initiation factor IF-3, C-terminal domain KJA61_15920 PF05198 Translation initiation factor IF-3, N-terminal domain KJA61_15925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJA61_15925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJA61_15925 PF03129 Anticodon binding domain KJA61_15925 PF02824 TGS domain KJA61_15930 PF00501 AMP-binding enzyme KJA61_15930 PF13193 AMP-binding enzyme C-terminal domain KJA61_15935 PF04751 Protein of unknown function (DUF615) KJA61_15940 PF00381 PTS HPr component phosphorylation site KJA61_15945 PF03668 P-loop ATPase protein family KJA61_15950 PF02569 Pantoate-beta-alanine ligase KJA61_15955 PF02548 Ketopantoate hydroxymethyltransferase KJA61_15960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KJA61_15965 PF12627 Probable RNA and SrmB- binding site of polymerase A KJA61_15965 PF12626 Polymerase A arginine-rich C-terminus KJA61_15965 PF01743 Poly A polymerase head domain KJA61_15975 PF03819 MazG nucleotide pyrophosphohydrolase domain KJA61_15985 PF13291 ACT domain KJA61_15985 PF04607 Region found in RelA / SpoT proteins KJA61_15985 PF02824 TGS domain KJA61_15990 PF05958 tRNA (Uracil-5-)-methyltransferase KJA61_16000 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_16005 PF01627 Hpt domain KJA61_16005 PF00672 HAMP domain KJA61_16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_16005 PF00512 His Kinase A (phospho-acceptor) domain KJA61_16005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KJA61_16005 PF00072 Response regulator receiver domain KJA61_16010 PF00378 Enoyl-CoA hydratase/isomerase KJA61_16015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA61_16015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA61_16020 PF01261 Xylose isomerase-like TIM barrel KJA61_16030 PF00106 short chain dehydrogenase KJA61_16035 PF02233 NAD(P) transhydrogenase beta subunit KJA61_16040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KJA61_16045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJA61_16045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJA61_16050 PF00892 EamA-like transporter family KJA61_16060 PF07690 Major Facilitator Superfamily KJA61_16065 PF01207 Dihydrouridine synthase (Dus) KJA61_16075 PF03466 LysR substrate binding domain KJA61_16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_16085 PF00899 ThiF family KJA61_16095 PF00694 Aconitase C-terminal domain KJA61_16095 PF00330 Aconitase family (aconitate hydratase) KJA61_16100 PF01026 TatD related DNase KJA61_16115 PF16658 Class II release factor RF3, C-terminal domain KJA61_16115 PF03144 Elongation factor Tu domain 2 KJA61_16115 PF00009 Elongation factor Tu GTP binding domain KJA61_16135 PF00990 Diguanylate cyclase, GGDEF domain KJA61_16135 PF03707 Bacterial signalling protein N terminal repeat KJA61_16135 PF00563 EAL domain KJA61_16140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KJA61_16140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KJA61_16145 PF10369 Small subunit of acetolactate synthase KJA61_16150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KJA61_16150 PF00205 Thiamine pyrophosphate enzyme, central domain KJA61_16150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJA61_16160 PF08264 Anticodon-binding domain of tRNA KJA61_16160 PF00133 tRNA synthetases class I (I, L, M and V) KJA61_16160 PF13603 Leucyl-tRNA synthetase, Domain 2 KJA61_16160 PF09334 tRNA synthetases class I (M) KJA61_16175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KJA61_16180 PF00005 ABC transporter KJA61_16180 PF02687 FtsX-like permease family KJA61_16180 PF12704 MacB-like periplasmic core domain KJA61_16185 PF02321 Outer membrane efflux protein KJA61_16200 PF00929 Exonuclease KJA61_16205 PF03193 RsgA GTPase KJA61_16215 PF00462 Glutaredoxin KJA61_16220 PF02556 Preprotein translocase subunit SecB KJA61_16235 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_16235 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_16250 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_16250 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_16260 PF04820 Tryptophan halogenase KJA61_16280 PF00221 Aromatic amino acid lyase KJA61_16295 PF00501 AMP-binding enzyme KJA61_16295 PF13193 AMP-binding enzyme C-terminal domain KJA61_16305 PF00550 Phosphopantetheine attachment site KJA61_16310 PF00550 Phosphopantetheine attachment site KJA61_16325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KJA61_16325 PF01926 50S ribosome-binding GTPase KJA61_16330 PF13360 PQQ-like domain KJA61_16340 PF03129 Anticodon binding domain KJA61_16340 PF13393 Histidyl-tRNA synthetase KJA61_16345 PF04551 GcpE protein KJA61_16350 PF13464 Domain of unknown function (DUF4115) KJA61_16360 PF04055 Radical SAM superfamily KJA61_16365 PF00334 Nucleoside diphosphate kinase KJA61_16370 PF04384 Iron-sulphur cluster assembly KJA61_16375 PF01569 PAP2 superfamily KJA61_16380 PF13439 Glycosyltransferase Family 4 KJA61_16380 PF00534 Glycosyl transferases group 1 KJA61_16385 PF17804 Tail specific protease N-terminal domain KJA61_16385 PF03572 Peptidase family S41 KJA61_16385 PF00595 PDZ domain KJA61_16385 PF11818 C-terminal domain of tail specific protease (DUF3340) KJA61_16390 PF00933 Glycosyl hydrolase family 3 N terminal domain KJA61_16400 PF00561 alpha/beta hydrolase fold KJA61_16405 PF00171 Aldehyde dehydrogenase family KJA61_16410 PF00171 Aldehyde dehydrogenase family KJA61_16415 PF01202 Shikimate kinase KJA61_16420 PF02447 GntP family permease KJA61_16425 PF01081 KDPG and KHG aldolase KJA61_16430 PF00920 Dehydratase family KJA61_16435 PF00871 Acetokinase family KJA61_16440 PF01515 Phosphate acetyl/butaryl transferase KJA61_16440 PF07085 DRTGG domain KJA61_16445 PF05683 Fumarase C-terminus KJA61_16445 PF05681 Fumarate hydratase (Fumerase) KJA61_16460 PF06689 ClpX C4-type zinc finger KJA61_16460 PF10431 C-terminal, D2-small domain, of ClpB protein KJA61_16460 PF07724 AAA domain (Cdc48 subfamily) KJA61_16465 PF00574 Clp protease KJA61_16470 PF05697 Bacterial trigger factor protein (TF) KJA61_16470 PF05698 Bacterial trigger factor protein (TF) C-terminus KJA61_16470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_16475 PF00593 TonB dependent receptor KJA61_16475 PF07715 TonB-dependent Receptor Plug Domain KJA61_16480 PF13640 2OG-Fe(II) oxygenase superfamily KJA61_16480 PF18331 PKHD-type hydroxylase C-terminal domain KJA61_16485 PF00682 HMGL-like KJA61_16485 PF08502 LeuA allosteric (dimerisation) domain KJA61_16490 PF00561 alpha/beta hydrolase fold KJA61_16495 PF00561 alpha/beta hydrolase fold KJA61_16495 PF07021 Methionine biosynthesis protein MetW KJA61_16505 PF01725 Ham1 family KJA61_16515 PF02416 mttA/Hcf106 family KJA61_16520 PF02416 mttA/Hcf106 family KJA61_16525 PF00902 Sec-independent protein translocase protein (TatC) KJA61_16545 PF01790 Prolipoprotein diacylglyceryl transferase KJA61_16560 PF00303 Thymidylate synthase KJA61_16565 PF00186 Dihydrofolate reductase KJA61_16575 PF01625 Peptide methionine sulfoxide reductase KJA61_16585 PF01618 MotA/TolQ/ExbB proton channel family KJA61_16595 PF00551 Formyl transferase KJA61_16595 PF01842 ACT domain KJA61_16605 PF00171 Aldehyde dehydrogenase family KJA61_16610 PF00830 Ribosomal L28 family KJA61_16615 PF00471 Ribosomal protein L33 KJA61_16620 PF00999 Sodium/hydrogen exchanger family KJA61_16620 PF02254 TrkA-N domain KJA61_16640 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KJA61_16645 PF00580 UvrD/REP helicase N-terminal domain KJA61_16645 PF13361 UvrD-like helicase C-terminal domain KJA61_16660 PF01131 DNA topoisomerase KJA61_16660 PF01396 Topoisomerase DNA binding C4 zinc finger KJA61_16660 PF08272 Topoisomerase I zinc-ribbon-like KJA61_16660 PF01751 Toprim domain KJA61_16670 PF01638 HxlR-like helix-turn-helix KJA61_16675 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_16675 PF00107 Zinc-binding dehydrogenase KJA61_16680 PF04102 SlyX KJA61_16685 PF00005 ABC transporter KJA61_16685 PF16326 ABC transporter C-terminal domain KJA61_16685 PF12848 ABC transporter KJA61_16690 PF01810 LysE type translocator KJA61_16695 PF03279 Bacterial lipid A biosynthesis acyltransferase KJA61_16705 PF00375 Sodium:dicarboxylate symporter family KJA61_16715 PF01118 Semialdehyde dehydrogenase, NAD binding domain KJA61_16715 PF02774 Semialdehyde dehydrogenase, dimerisation domain KJA61_16735 PF01416 tRNA pseudouridine synthase KJA61_16745 PF01176 Translation initiation factor 1A / IF-1 KJA61_16760 PF00180 Isocitrate/isopropylmalate dehydrogenase KJA61_16770 PF00694 Aconitase C-terminal domain KJA61_16775 PF00330 Aconitase family (aconitate hydratase) KJA61_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_16785 PF03466 LysR substrate binding domain KJA61_16805 PF00293 NUDIX domain KJA61_16810 PF01590 GAF domain KJA61_16810 PF05524 PEP-utilising enzyme, N-terminal KJA61_16810 PF00391 PEP-utilising enzyme, mobile domain KJA61_16810 PF02896 PEP-utilising enzyme, TIM barrel domain KJA61_16815 PF00141 Peroxidase KJA61_16820 PF12706 Beta-lactamase superfamily domain KJA61_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_16825 PF03466 LysR substrate binding domain KJA61_16835 PF02798 Glutathione S-transferase, N-terminal domain KJA61_16840 PF08279 HTH domain KJA61_16840 PF13280 WYL domain KJA61_16845 PF13419 Haloacid dehalogenase-like hydrolase KJA61_16850 PF00849 RNA pseudouridylate synthase KJA61_16850 PF01479 S4 domain KJA61_16855 PF10150 Ribonuclease E/G family KJA61_16855 PF12111 Polyribonucleotide phosphorylase C terminal KJA61_16855 PF00575 S1 RNA binding domain KJA61_16860 PF13193 AMP-binding enzyme C-terminal domain KJA61_16860 PF00501 AMP-binding enzyme KJA61_16875 PF03466 LysR substrate binding domain KJA61_16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJA61_16880 PF00106 short chain dehydrogenase KJA61_16885 PF06969 HemN C-terminal domain KJA61_16885 PF04055 Radical SAM superfamily KJA61_16895 PF01554 MatE KJA61_16900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_16900 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_16900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA61_16905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KJA61_16905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_16910 PF03109 ABC1 family KJA61_16915 PF01197 Ribosomal protein L31 KJA61_16930 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KJA61_16950 PF03884 DNA gyrase inhibitor YacG KJA61_16955 PF00753 Metallo-beta-lactamase superfamily KJA61_16960 PF00762 Ferrochelatase KJA61_16970 PF01177 Asp/Glu/Hydantoin racemase KJA61_16985 PF01206 Sulfurtransferase TusA KJA61_16990 PF00571 CBS domain KJA61_16990 PF03471 Transporter associated domain KJA61_16995 PF00795 Carbon-nitrogen hydrolase KJA61_17000 PF01588 Putative tRNA binding domain KJA61_17010 PF07963 Prokaryotic N-terminal methylation motif KJA61_17010 PF08334 Type II secretion system (T2SS), protein G KJA61_17015 PF00482 Type II secretion system (T2SS), protein F KJA61_17020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KJA61_17020 PF17764 3′ DNA-binding domain (3′BD) KJA61_17020 PF00270 DEAD/DEAH box helicase KJA61_17020 PF00271 Helicase conserved C-terminal domain KJA61_17020 PF18074 Primosomal protein N C-terminal domain KJA61_17025 PF00999 Sodium/hydrogen exchanger family KJA61_17025 PF02254 TrkA-N domain KJA61_17030 PF01430 Hsp33 protein KJA61_17040 PF00226 DnaJ domain KJA61_17040 PF01556 DnaJ C terminal domain KJA61_17050 PF01544 CorA-like Mg2+ transporter protein KJA61_17055 PF01138 3' exoribonuclease family, domain 1 KJA61_17055 PF00013 KH domain KJA61_17055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KJA61_17055 PF03725 3' exoribonuclease family, domain 2 KJA61_17055 PF00575 S1 RNA binding domain KJA61_17060 PF00312 Ribosomal protein S15 KJA61_17065 PF00144 Beta-lactamase KJA61_17070 PF13538 UvrD-like helicase C-terminal domain KJA61_17075 PF12705 PD-(D/E)XK nuclease superfamily KJA61_17075 PF00580 UvrD/REP helicase N-terminal domain KJA61_17075 PF13361 UvrD-like helicase C-terminal domain KJA61_17080 PF17946 RecC C-terminal domain KJA61_17090 PF03976 Polyphosphate kinase 2 (PPK2) KJA61_17100 PF01209 ubiE/COQ5 methyltransferase family KJA61_17110 PF03109 ABC1 family KJA61_17115 PF01494 FAD binding domain KJA61_17120 PF01502 Phosphoribosyl-AMP cyclohydrolase KJA61_17135 PF13244 Domain of unknown function (DUF4040) KJA61_17135 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KJA61_17135 PF00361 Proton-conducting membrane transporter KJA61_17135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJA61_17140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KJA61_17145 PF00361 Proton-conducting membrane transporter KJA61_17150 PF01899 Na+/H+ ion antiporter subunit KJA61_17155 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KJA61_17160 PF03334 Na+/H+ antiporter subunit KJA61_17165 PF02033 Ribosome-binding factor A KJA61_17170 PF00009 Elongation factor Tu GTP binding domain KJA61_17170 PF11987 Translation-initiation factor 2 KJA61_17170 PF08364 Bacterial translation initiation factor IF-2 associated region KJA61_17170 PF04760 Translation initiation factor IF-2, N-terminal region KJA61_17175 PF00575 S1 RNA binding domain KJA61_17175 PF13184 NusA-like KH domain KJA61_17175 PF08529 NusA N-terminal domain KJA61_17180 PF17384 RimP C-terminal SH3 domain KJA61_17180 PF02576 RimP N-terminal domain KJA61_17200 PF03840 Preprotein translocase SecG subunit KJA61_17205 PF00121 Triosephosphate isomerase KJA61_17210 PF00437 Type II/IV secretion system protein KJA61_17210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJA61_17215 PF00482 Type II secretion system (T2SS), protein F KJA61_17220 PF06750 Bacterial Peptidase A24 N-terminal domain KJA61_17220 PF01478 Type IV leader peptidase family KJA61_17225 PF01121 Dephospho-CoA kinase KJA61_17235 PF00588 SpoU rRNA Methylase family KJA61_17235 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJA61_17240 PF06865 Pyrimidine/purine nucleoside phosphorylase KJA61_17250 PF02463 RecF/RecN/SMC N terminal domain KJA61_17255 PF02622 Uncharacterized ACR, COG1678 KJA61_17260 PF03652 Holliday junction resolvase KJA61_17265 PF13533 Biotin-lipoyl like KJA61_17290 PF02805 Metal binding domain of Ada KJA61_17290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJA61_17290 PF12833 Helix-turn-helix domain KJA61_17290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KJA61_17295 PF01066 CDP-alcohol phosphatidyltransferase KJA61_17305 PF02151 UvrB/uvrC motif KJA61_17305 PF01541 GIY-YIG catalytic domain KJA61_17305 PF08459 UvrC Helix-hairpin-helix N-terminal KJA61_17325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJA61_17325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJA61_17325 PF00378 Enoyl-CoA hydratase/isomerase KJA61_17330 PF02803 Thiolase, C-terminal domain KJA61_17330 PF00108 Thiolase, N-terminal domain KJA61_17350 PF09278 MerR, DNA binding KJA61_17350 PF00376 MerR family regulatory protein KJA61_17360 PF01323 DSBA-like thioredoxin domain KJA61_17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_17375 PF00183 Hsp90 protein KJA61_17390 PF13726 Na+-H+ antiporter family KJA61_17390 PF03553 Na+/H+ antiporter family KJA61_17395 PF00561 alpha/beta hydrolase fold KJA61_17415 PF00623 RNA polymerase Rpb1, domain 2 KJA61_17415 PF04983 RNA polymerase Rpb1, domain 3 KJA61_17415 PF04998 RNA polymerase Rpb1, domain 5 KJA61_17415 PF04997 RNA polymerase Rpb1, domain 1 KJA61_17415 PF05000 RNA polymerase Rpb1, domain 4 KJA61_17420 PF04561 RNA polymerase Rpb2, domain 2 KJA61_17420 PF04565 RNA polymerase Rpb2, domain 3 KJA61_17420 PF10385 RNA polymerase beta subunit external 1 domain KJA61_17420 PF04563 RNA polymerase beta subunit KJA61_17420 PF04560 RNA polymerase Rpb2, domain 7 KJA61_17420 PF00562 RNA polymerase Rpb2, domain 6 KJA61_17425 PF16320 Ribosomal protein L7/L12 dimerisation domain KJA61_17425 PF00542 Ribosomal protein L7/L12 C-terminal domain KJA61_17430 PF00466 Ribosomal protein L10 KJA61_17435 PF00687 Ribosomal protein L1p/L10e family KJA61_17440 PF00298 Ribosomal protein L11, RNA binding domain KJA61_17440 PF03946 Ribosomal protein L11, N-terminal domain KJA61_17445 PF00467 KOW motif KJA61_17445 PF02357 Transcription termination factor nusG KJA61_17450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KJA61_17460 PF03143 Elongation factor Tu C-terminal domain KJA61_17460 PF03144 Elongation factor Tu domain 2 KJA61_17460 PF00009 Elongation factor Tu GTP binding domain KJA61_17485 PF04715 Anthranilate synthase component I, N terminal region KJA61_17485 PF00425 chorismate binding enzyme KJA61_17490 PF13419 Haloacid dehalogenase-like hydrolase KJA61_17495 PF12401 Protein of unknown function (DUF2662) KJA61_17495 PF00498 FHA domain KJA61_17500 PF00263 Bacterial type II and III secretion system protein KJA61_17500 PF03958 Bacterial type II/III secretion system short domain KJA61_17515 PF00816 H-NS histone family KJA61_17540 PF03900 Porphobilinogen deaminase, C-terminal domain KJA61_17540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KJA61_17545 PF00072 Response regulator receiver domain KJA61_17545 PF04397 LytTr DNA-binding domain KJA61_17550 PF07694 5TMR of 5TMR-LYT KJA61_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_17550 PF06580 Histidine kinase KJA61_17555 PF14698 Argininosuccinate lyase C-terminal KJA61_17555 PF00206 Lyase KJA61_17560 PF04362 Bacterial Fe(2+) trafficking KJA61_17565 PF01895 PhoU domain KJA61_17570 PF02321 Outer membrane efflux protein KJA61_17575 PF00892 EamA-like transporter family KJA61_17590 PF13667 ThiC-associated domain KJA61_17590 PF01964 Radical SAM ThiC family KJA61_17595 PF00293 NUDIX domain KJA61_17600 PF00149 Calcineurin-like phosphoesterase KJA61_17605 PF01258 Prokaryotic dksA/traR C4-type zinc finger KJA61_17610 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJA61_17615 PF01098 Cell cycle protein KJA61_17620 PF08245 Mur ligase middle domain KJA61_17620 PF02875 Mur ligase family, glutamate ligase domain KJA61_17630 PF02421 Ferrous iron transport protein B KJA61_17630 PF07664 Ferrous iron transport protein B C terminus KJA61_17630 PF07670 Nucleoside recognition KJA61_17640 PF02899 Phage integrase, N-terminal SAM-like domain KJA61_17640 PF00589 Phage integrase family KJA61_17645 PF10411 Disulfide bond isomerase protein N-terminus KJA61_17645 PF13098 Thioredoxin-like domain KJA61_17650 PF01842 ACT domain KJA61_17650 PF03447 Homoserine dehydrogenase, NAD binding domain KJA61_17650 PF00742 Homoserine dehydrogenase KJA61_17655 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_17660 PF00768 D-alanyl-D-alanine carboxypeptidase KJA61_17665 PF00196 Bacterial regulatory proteins, luxR family KJA61_17665 PF00072 Response regulator receiver domain KJA61_17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJA61_17670 PF00512 His Kinase A (phospho-acceptor) domain KJA61_17675 PF00072 Response regulator receiver domain KJA61_17675 PF02954 Bacterial regulatory protein, Fis family KJA61_17675 PF00158 Sigma-54 interaction domain KJA61_17680 PF03572 Peptidase family S41 KJA61_17680 PF00595 PDZ domain KJA61_17685 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KJA61_17685 PF01676 Metalloenzyme superfamily KJA61_17690 PF03739 Lipopolysaccharide export system permease LptF/LptG KJA61_17700 PF00883 Cytosol aminopeptidase family, catalytic domain KJA61_17700 PF02789 Cytosol aminopeptidase family, N-terminal domain KJA61_17720 PF00677 Lumazine binding domain KJA61_17730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KJA61_17730 PF01872 RibD C-terminal domain KJA61_17735 PF03477 ATP cone domain KJA61_17740 PF00909 Ammonium Transporter Family KJA61_17745 PF00543 Nitrogen regulatory protein P-II KJA61_17755 PF01078 Magnesium chelatase, subunit ChlI KJA61_17755 PF13335 Magnesium chelatase, subunit ChlI C-terminal KJA61_17765 PF01636 Phosphotransferase enzyme family KJA61_17770 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KJA61_17790 PF02909 Tetracyclin repressor-like, C-terminal domain KJA61_17790 PF00440 Bacterial regulatory proteins, tetR family KJA61_17795 PF07690 Major Facilitator Superfamily KJA61_17805 PF01740 STAS domain KJA61_17805 PF00916 Sulfate permease family KJA61_17810 PF00582 Universal stress protein family KJA61_17840 PF00665 Integrase core domain KJA61_17850 PF13335 Magnesium chelatase, subunit ChlI C-terminal KJA61_17850 PF01078 Magnesium chelatase, subunit ChlI KJA61_17855 PF00392 Bacterial regulatory proteins, gntR family KJA61_17855 PF00155 Aminotransferase class I and II KJA61_17865 PF00701 Dihydrodipicolinate synthetase family KJA61_17875 PF03573 outer membrane porin, OprD family KJA61_17880 PF00719 Inorganic pyrophosphatase KJA61_17895 PF00501 AMP-binding enzyme KJA61_17895 PF13193 AMP-binding enzyme C-terminal domain KJA61_17900 PF03989 DNA gyrase C-terminal domain, beta-propeller KJA61_17900 PF00521 DNA gyrase/topoisomerase IV, subunit A KJA61_17905 PF07690 Major Facilitator Superfamily KJA61_17910 PF03458 UPF0126 domain KJA61_17915 PF02810 SEC-C motif KJA61_17920 PF03471 Transporter associated domain KJA61_17920 PF03741 Integral membrane protein TerC family KJA61_17925 PF03641 Possible lysine decarboxylase KJA61_17930 PF07690 Major Facilitator Superfamily KJA61_17940 PF00817 impB/mucB/samB family KJA61_17940 PF11798 IMS family HHH motif KJA61_17940 PF11799 impB/mucB/samB family C-terminal domain KJA61_17955 PF04055 Radical SAM superfamily KJA61_17955 PF08497 Radical SAM N-terminal KJA61_17955 PF11842 Domain of unknown function (DUF3362) KJA61_17975 PF03358 NADPH-dependent FMN reductase KJA61_17985 PF00291 Pyridoxal-phosphate dependent enzyme KJA61_18020 PF00440 Bacterial regulatory proteins, tetR family KJA61_18045 PF01327 Polypeptide deformylase KJA61_18055 PF17782 DprA winged helix domain KJA61_18055 PF02481 DNA recombination-mediator protein A KJA61_18060 PF01300 Telomere recombination KJA61_18065 PF00892 EamA-like transporter family KJA61_18070 PF00440 Bacterial regulatory proteins, tetR family KJA61_18075 PF07690 Major Facilitator Superfamily KJA61_18085 PF00255 Glutathione peroxidase KJA61_18095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KJA61_18100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA61_18100 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJA61_18105 PF00231 ATP synthase KJA61_18110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJA61_18110 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJA61_18110 PF00306 ATP synthase alpha/beta chain, C terminal domain KJA61_18115 PF00213 ATP synthase delta (OSCP) subunit KJA61_18120 PF00430 ATP synthase B/B' CF(0) KJA61_18125 PF00137 ATP synthase subunit C KJA61_18130 PF00119 ATP synthase A chain KJA61_18150 PF00005 ABC transporter KJA61_18155 PF00950 ABC 3 transport family KJA61_18160 PF01810 LysE type translocator KJA61_18165 PF04261 Dyp-type peroxidase family KJA61_18175 PF00390 Malic enzyme, N-terminal domain KJA61_18175 PF03949 Malic enzyme, NAD binding domain KJA61_18180 PF03485 Arginyl tRNA synthetase N terminal domain KJA61_18180 PF05746 DALR anticodon binding domain KJA61_18180 PF00750 tRNA synthetases class I (R) KJA61_18200 PF02678 Pirin KJA61_18200 PF05726 Pirin C-terminal cupin domain KJA61_18210 PF03551 Transcriptional regulator PadR-like family KJA61_18215 PF13427 Domain of unknown function (DUF4111) KJA61_18215 PF01909 Nucleotidyltransferase domain KJA61_18220 PF00117 Glutamine amidotransferase class-I KJA61_18220 PF00958 GMP synthase C terminal domain KJA61_18220 PF02540 NAD synthase KJA61_18225 PF04286 Protein of unknown function (DUF445) KJA61_18230 PF07681 DoxX KJA61_18235 PF09335 SNARE associated Golgi protein KJA61_18250 PF13614 AAA domain KJA61_18260 PF01722 BolA-like protein KJA61_18275 PF01648 4'-phosphopantetheinyl transferase superfamily KJA61_18280 PF12697 Alpha/beta hydrolase family KJA61_18300 PF16197 Ketoacyl-synthetase C-terminal extension KJA61_18300 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_18300 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_18300 PF00550 Phosphopantetheine attachment site KJA61_18300 PF08242 Methyltransferase domain KJA61_18300 PF00975 Thioesterase domain KJA61_18300 PF14765 Polyketide synthase dehydratase KJA61_18305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_18305 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_18305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_18310 PF00501 AMP-binding enzyme KJA61_18315 PF00196 Bacterial regulatory proteins, luxR family KJA61_18315 PF03472 Autoinducer binding domain KJA61_18325 PF00765 Autoinducer synthase KJA61_18330 PF00083 Sugar (and other) transporter KJA61_18330 PF07690 Major Facilitator Superfamily KJA61_18335 PF00378 Enoyl-CoA hydratase/isomerase KJA61_18340 PF00378 Enoyl-CoA hydratase/isomerase KJA61_18345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJA61_18345 PF02770 Acyl-CoA dehydrogenase, middle domain KJA61_18345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJA61_18350 PF13193 AMP-binding enzyme C-terminal domain KJA61_18350 PF00501 AMP-binding enzyme KJA61_18355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KJA61_18355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KJA61_18360 PF00171 Aldehyde dehydrogenase family KJA61_18370 PF00324 Amino acid permease KJA61_18375 PF00324 Amino acid permease KJA61_18380 PF01042 Endoribonuclease L-PSP KJA61_18385 PF01168 Alanine racemase, N-terminal domain KJA61_18385 PF00842 Alanine racemase, C-terminal domain KJA61_18390 PF01266 FAD dependent oxidoreductase KJA61_18395 PF01037 Lrp/AsnC ligand binding domain KJA61_18405 PF00593 TonB dependent receptor KJA61_18405 PF07715 TonB-dependent Receptor Plug Domain KJA61_18420 PF00849 RNA pseudouridylate synthase KJA61_18435 PF00440 Bacterial regulatory proteins, tetR family KJA61_18435 PF08361 MAATS-type transcriptional repressor, C-terminal region KJA61_18445 PF00109 Beta-ketoacyl synthase, N-terminal domain KJA61_18445 PF02801 Beta-ketoacyl synthase, C-terminal domain KJA61_18480 PF00694 Aconitase C-terminal domain KJA61_18480 PF00330 Aconitase family (aconitate hydratase) KJA61_18485 PF00285 Citrate synthase, C-terminal domain KJA61_18495 PF00392 Bacterial regulatory proteins, gntR family KJA61_18495 PF07729 FCD domain KJA61_18505 PF00155 Aminotransferase class I and II KJA61_18510 PF09330 D-lactate dehydrogenase, membrane binding KJA61_18510 PF01565 FAD binding domain KJA61_18515 PF01070 FMN-dependent dehydrogenase KJA61_18520 PF07729 FCD domain KJA61_18520 PF00392 Bacterial regulatory proteins, gntR family KJA61_18525 PF02652 L-lactate permease KJA61_18530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJA61_18530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJA61_18530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJA61_18530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJA61_18540 PF16363 GDP-mannose 4,6 dehydratase KJA61_18545 PF00342 Phosphoglucose isomerase KJA61_18550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KJA61_18550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KJA61_18550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KJA61_18555 PF00483 Nucleotidyl transferase KJA61_18560 PF02397 Bacterial sugar transferase KJA61_18565 PF00535 Glycosyl transferase family 2 KJA61_18570 PF00534 Glycosyl transferases group 1 KJA61_18580 PF00535 Glycosyl transferase family 2 KJA61_18590 PF13439 Glycosyltransferase Family 4 KJA61_18590 PF00534 Glycosyl transferases group 1 KJA61_18600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KJA61_18605 PF00132 Bacterial transferase hexapeptide (six repeats) KJA61_18610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KJA61_18610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KJA61_18615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KJA61_18615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KJA61_18615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KJA61_18620 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KJA61_18620 PF10531 SLBB domain KJA61_18620 PF02563 Polysaccharide biosynthesis/export protein KJA61_18625 PF01451 Low molecular weight phosphotyrosine protein phosphatase KJA61_18630 PF02706 Chain length determinant protein KJA61_18630 PF13614 AAA domain KJA61_18630 PF13807 G-rich domain on putative tyrosine kinase KJA61_18635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KJA61_18635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_18640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KJA61_18640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_18645 PF03023 Lipid II flippase MurJ KJA61_18650 PF01510 N-acetylmuramoyl-L-alanine amidase KJA61_18655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KJA61_18655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KJA61_18665 PF04185 Phosphoesterase family KJA61_18665 PF05506 Domain of unknown function (DUF756) KJA61_18670 PF03725 3' exoribonuclease family, domain 2 KJA61_18670 PF01138 3' exoribonuclease family, domain 1 KJA61_18675 PF00487 Fatty acid desaturase KJA61_18680 PF00175 Oxidoreductase NAD-binding domain KJA61_18685 PF00440 Bacterial regulatory proteins, tetR family KJA61_18690 PF08360 QacR-like protein, C-terminal region KJA61_18690 PF00440 Bacterial regulatory proteins, tetR family KJA61_18695 PF01323 DSBA-like thioredoxin domain KJA61_18705 PF13419 Haloacid dehalogenase-like hydrolase KJA61_18710 PF00106 short chain dehydrogenase KJA61_18725 PF00583 Acetyltransferase (GNAT) family KJA61_18725 PF00696 Amino acid kinase family KJA61_18730 PF09084 NMT1/THI5 like KJA61_18735 PF09084 NMT1/THI5 like KJA61_18740 PF00296 Luciferase-like monooxygenase KJA61_18745 PF00528 Binding-protein-dependent transport system inner membrane component KJA61_18750 PF00005 ABC transporter KJA61_18755 PF08362 YcdC-like protein, C-terminal region KJA61_18755 PF00440 Bacterial regulatory proteins, tetR family KJA61_18760 PF01048 Phosphorylase superfamily KJA61_18770 PF06574 FAD synthetase KJA61_18770 PF01687 Riboflavin kinase KJA61_18775 PF06827 Zinc finger found in FPG and IleRS KJA61_18775 PF08264 Anticodon-binding domain of tRNA KJA61_18775 PF00133 tRNA synthetases class I (I, L, M and V) KJA61_18780 PF01252 Signal peptidase (SPase) II KJA61_18785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJA61_18825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KJA61_18830 PF07859 alpha/beta hydrolase fold KJA61_18855 PF01025 GrpE KJA61_18860 PF00012 Hsp70 protein KJA61_18880 PF13406 Transglycosylase SLT domain KJA61_18885 PF02222 ATP-grasp domain KJA61_18885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KJA61_18890 PF00731 AIR carboxylase KJA61_18900 PF02875 Mur ligase family, glutamate ligase domain KJA61_18900 PF08245 Mur ligase middle domain KJA61_18900 PF01225 Mur ligase family, catalytic domain KJA61_18910 PF01569 PAP2 superfamily KJA61_18915 PF03741 Integral membrane protein TerC family KJA61_18925 PF03738 Glutathionylspermidine synthase preATP-grasp KJA61_18930 PF00355 Rieske [2Fe-2S] domain KJA61_18935 PF01979 Amidohydrolase family KJA61_18940 PF00156 Phosphoribosyl transferase domain KJA61_18950 PF10411 Disulfide bond isomerase protein N-terminus KJA61_18950 PF13098 Thioredoxin-like domain KJA61_18955 PF16916 Dimerisation domain of Zinc Transporter KJA61_18955 PF01545 Cation efflux family KJA61_18960 PF02583 Metal-sensitive transcriptional repressor KJA61_18965 PF12631 MnmE helical domain KJA61_18965 PF10396 GTP-binding protein TrmE N-terminus KJA61_18965 PF01926 50S ribosome-binding GTPase KJA61_18970 PF02096 60Kd inner membrane protein KJA61_18970 PF14849 YidC periplasmic domain KJA61_18975 PF01809 Putative membrane protein insertion efficiency factor KJA61_18980 PF00825 Ribonuclease P KJA61_18985 PF00468 Ribosomal protein L34 KJA61_18995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KJA61_19005 PF00465 Iron-containing alcohol dehydrogenase KJA61_19015 PF00756 Putative esterase KJA61_19020 PF00107 Zinc-binding dehydrogenase KJA61_19020 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_19025 PF02583 Metal-sensitive transcriptional repressor KJA61_19040 PF00107 Zinc-binding dehydrogenase KJA61_19040 PF08240 Alcohol dehydrogenase GroES-like domain KJA61_19040 PF13823 Alcohol dehydrogenase GroES-associated KJA61_19105 PF02216 B domain KJA61_19105 PF00746 LPXTG cell wall anchor motif KJA61_19105 PF01476 LysM domain KJA61_19105 PF03373 Octapeptide repeat KJA61_19105 PF04650 YSIRK type signal peptide KJA61_19120 PF00271 Helicase conserved C-terminal domain KJA61_19120 PF17757 UvrB interaction domain KJA61_19120 PF03461 TRCF domain KJA61_19120 PF02559 CarD-like/TRCF domain KJA61_19120 PF00270 DEAD/DEAH box helicase KJA61_19140 PF00005 ABC transporter KJA61_19140 PF09383 NIL domain KJA61_19320 PF08275 DNA primase catalytic core, N-terminal domain KJA61_19320 PF10410 DnaB-helicase binding domain of primase KJA61_19320 PF01807 CHC2 zinc finger KJA61_19350 PF00625 Guanylate kinase KJA61_19365 PF07015 VirC1 protein KJA61_19375 PF02899 Phage integrase, N-terminal SAM-like domain KJA61_19375 PF00589 Phage integrase family KJA61_19410 PF02811 PHP domain KJA61_19410 PF14579 Helix-hairpin-helix motif KJA61_19410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJA61_19410 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJA61_19420 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJA61_19420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJA61_19420 PF14579 Helix-hairpin-helix motif KJA61_19420 PF02811 PHP domain KJA61_19435 PF00476 DNA polymerase family A KJA61_19435 PF01367 5'-3' exonuclease, C-terminal SAM fold KJA61_19435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KJA61_19435 PF01612 3'-5' exonuclease KJA61_19440 PF03161 LAGLIDADG DNA endonuclease family KJA61_19440 PF00154 recA bacterial DNA recombination protein KJA61_19465 PF06470 SMC proteins Flexible Hinge Domain KJA61_19465 PF02463 RecF/RecN/SMC N terminal domain KJA61_19485 PF02867 Ribonucleotide reductase, barrel domain KJA61_19485 PF03477 ATP cone domain KJA61_19485 PF00317 Ribonucleotide reductase, all-alpha domain KJA61_19490 PF00268 Ribonucleotide reductase, small chain KJA61_19530 PF00929 Exonuclease KJA61_19565 PF13737 Transposase DDE domain KJA61_19570 PF00107 Zinc-binding dehydrogenase KJA61_19570 PF16884 N-terminal domain of oxidoreductase KJA61_19580 PF00440 Bacterial regulatory proteins, tetR family KJA61_19580 PF16925 Tetracyclin repressor-like, C-terminal domain