locus-tag class description KU053_00005 PF00308 Bacterial dnaA protein KU053_00005 PF08299 Bacterial dnaA protein helix-turn-helix KU053_00005 PF11638 DnaA N-terminal domain KU053_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KU053_00010 PF02767 DNA polymerase III beta subunit, central domain KU053_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KU053_00015 PF02463 RecF/RecN/SMC N terminal domain KU053_00020 PF00204 DNA gyrase B KU053_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KU053_00020 PF18053 DNA gyrase B subunit insert domain KU053_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_00020 PF01751 Toprim domain KU053_00030 PF09335 SNARE associated Golgi protein KU053_00035 PF00005 ABC transporter KU053_00035 PF12848 ABC transporter KU053_00055 PF01521 Iron-sulphur cluster biosynthesis KU053_00060 PF00561 alpha/beta hydrolase fold KU053_00065 PF03702 Anhydro-N-acetylmuramic acid kinase KU053_00070 PF00579 tRNA synthetases class I (W and Y) KU053_00110 PF00209 Sodium:neurotransmitter symporter family KU053_00120 PF01189 16S rRNA methyltransferase RsmB/F KU053_00120 PF01029 NusB family KU053_00125 PF02911 Formyl transferase, C-terminal domain KU053_00125 PF00551 Formyl transferase KU053_00130 PF00920 Dehydratase family KU053_00145 PF03466 LysR substrate binding domain KU053_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_00150 PF00860 Permease family KU053_00155 PF00311 Phosphoenolpyruvate carboxylase KU053_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region KU053_00160 PF00440 Bacterial regulatory proteins, tetR family KU053_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_00170 PF00873 AcrB/AcrD/AcrF family KU053_00180 PF00684 DnaJ central domain KU053_00180 PF01556 DnaJ C terminal domain KU053_00180 PF00226 DnaJ domain KU053_00190 PF05173 Dihydrodipicolinate reductase, C-terminus KU053_00190 PF01113 Dihydrodipicolinate reductase, N-terminus KU053_00200 PF07690 Major Facilitator Superfamily KU053_00205 PF00248 Aldo/keto reductase family KU053_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_00210 PF03466 LysR substrate binding domain KU053_00225 PF00392 Bacterial regulatory proteins, gntR family KU053_00225 PF00155 Aminotransferase class I and II KU053_00230 PF08240 Alcohol dehydrogenase GroES-like domain KU053_00230 PF00107 Zinc-binding dehydrogenase KU053_00235 PF03352 Methyladenine glycosylase KU053_00250 PF14815 NUDIX domain KU053_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein KU053_00250 PF00633 Helix-hairpin-helix motif KU053_00250 PF10576 Iron-sulfur binding domain of endonuclease III KU053_00265 PF07043 Protein of unknown function (DUF1328) KU053_00270 PF03692 Putative zinc- or iron-chelating domain KU053_00275 PF07995 Glucose / Sorbosone dehydrogenase KU053_00280 PF00004 ATPase family associated with various cellular activities (AAA) KU053_00280 PF16193 AAA C-terminal domain KU053_00280 PF12002 MgsA AAA+ ATPase C terminal KU053_00285 PF01226 Formate/nitrite transporter KU053_00295 PF01259 SAICAR synthetase KU053_00305 PF00701 Dihydrodipicolinate synthetase family KU053_00310 PF00857 Isochorismatase family KU053_00315 PF01758 Sodium Bile acid symporter family KU053_00320 PF01554 MatE KU053_00325 PF04463 Protein of unknown function (DUF523) KU053_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU053_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU053_00345 PF02798 Glutathione S-transferase, N-terminal domain KU053_00345 PF14497 Glutathione S-transferase, C-terminal domain KU053_00355 PF00324 Amino acid permease KU053_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU053_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU053_00375 PF07702 UTRA domain KU053_00375 PF00392 Bacterial regulatory proteins, gntR family KU053_00380 PF05962 HutD KU053_00385 PF17391 Urocanase N-terminal domain KU053_00385 PF01175 Urocanase Rossmann-like domain KU053_00385 PF17392 Urocanase C-terminal domain KU053_00390 PF00221 Aromatic amino acid lyase KU053_00395 PF00324 Amino acid permease KU053_00400 PF01979 Amidohydrolase family KU053_00405 PF00491 Arginase family KU053_00420 PF01177 Asp/Glu/Hydantoin racemase KU053_00425 PF01380 SIS domain KU053_00430 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_00430 PF14602 Hexapeptide repeat of succinyl-transferase KU053_00430 PF12804 MobA-like NTP transferase domain KU053_00435 PF04608 Phosphatidylglycerophosphatase A KU053_00440 PF02769 AIR synthase related protein, C-terminal domain KU053_00440 PF00586 AIR synthase related protein, N-terminal domain KU053_00445 PF01029 NusB family KU053_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase KU053_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU053_00455 PF00925 GTP cyclohydrolase II KU053_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase KU053_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KU053_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU053_00490 PF00581 Rhodanese-like domain KU053_00495 PF02666 Phosphatidylserine decarboxylase KU053_00500 PF03069 Acetamidase/Formamidase family KU053_00520 PF00512 His Kinase A (phospho-acceptor) domain KU053_00520 PF00989 PAS fold KU053_00520 PF11808 Phosphate regulon sensor protein PhoR KU053_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_00525 PF00072 Response regulator receiver domain KU053_00525 PF00486 Transcriptional regulatory protein, C terminal KU053_00535 PF00106 short chain dehydrogenase KU053_00540 PF01554 MatE KU053_00545 PF00155 Aminotransferase class I and II KU053_00550 PF04286 Protein of unknown function (DUF445) KU053_00565 PF04262 Glutamate-cysteine ligase KU053_00570 PF02600 Disulfide bond formation protein DsbB KU053_00575 PF13296 Putative type VI secretion system Rhs element Vgr KU053_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU053_00575 PF04717 Type VI secretion system, phage-baseplate injector KU053_00580 PF00877 NlpC/P60 family KU053_00580 PF01476 LysM domain KU053_00595 PF05728 Uncharacterised protein family (UPF0227) KU053_00600 PF01751 Toprim domain KU053_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_00600 PF00986 DNA gyrase B subunit, carboxyl terminus KU053_00600 PF00204 DNA gyrase B KU053_00605 PF00106 short chain dehydrogenase KU053_00610 PF04115 Ureidoglycolate lyase KU053_00615 PF03561 Allantoicase repeat KU053_00620 PF01494 FAD binding domain KU053_00630 PF00860 Permease family KU053_00635 PF00576 HIUase/Transthyretin family KU053_00665 PF02683 Cytochrome C biogenesis protein transmembrane region KU053_00665 PF11412 Disulphide bond corrector protein DsbC KU053_00670 PF00990 Diguanylate cyclase, GGDEF domain KU053_00670 PF07694 5TMR of 5TMR-LYT KU053_00675 PF07859 alpha/beta hydrolase fold KU053_00685 PF03960 ArsC family KU053_00690 PF03372 Endonuclease/Exonuclease/phosphatase family KU053_00695 PF00156 Phosphoribosyl transferase domain KU053_00700 PF00593 TonB dependent receptor KU053_00700 PF07715 TonB-dependent Receptor Plug Domain KU053_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KU053_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KU053_00715 PF03033 Glycosyltransferase family 28 N-terminal domain KU053_00715 PF04101 Glycosyltransferase family 28 C-terminal domain KU053_00720 PF08245 Mur ligase middle domain KU053_00720 PF02875 Mur ligase family, glutamate ligase domain KU053_00720 PF01225 Mur ligase family, catalytic domain KU053_00725 PF01820 D-ala D-ala ligase N-terminus KU053_00725 PF07478 D-ala D-ala ligase C-terminus KU053_00730 PF08478 POTRA domain, FtsQ-type KU053_00730 PF03799 Cell division protein FtsQ KU053_00735 PF02491 SHS2 domain inserted in FTSA KU053_00740 PF00091 Tubulin/FtsZ family, GTPase domain KU053_00740 PF12327 FtsZ family, C-terminal domain KU053_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KU053_00755 PF01551 Peptidase family M23 KU053_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain KU053_00760 PF00456 Transketolase, thiamine diphosphate binding domain KU053_00765 PF02817 e3 binding domain KU053_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU053_00765 PF00364 Biotin-requiring enzyme KU053_00775 PF01169 Uncharacterized protein family UPF0016 KU053_00785 PF13005 zinc-finger binding domain of transposase IS66 KU053_00785 PF03050 Transposase IS66 family KU053_00785 PF13817 IS66 C-terminal element KU053_00785 PF13007 Transposase C of IS166 homeodomain KU053_00805 PF01613 Flavin reductase like domain KU053_00805 PF00258 Flavodoxin KU053_00810 PF03692 Putative zinc- or iron-chelating domain KU053_00815 PF00571 CBS domain KU053_00815 PF00478 IMP dehydrogenase / GMP reductase domain KU053_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU053_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU053_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU053_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU053_00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KU053_00825 PF01243 Pyridoxamine 5'-phosphate oxidase KU053_00830 PF02272 DHHA1 domain KU053_00830 PF17768 RecJ OB domain KU053_00830 PF01368 DHH family KU053_00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KU053_00860 PF04452 RNA methyltransferase KU053_00865 PF00924 Mechanosensitive ion channel KU053_00875 PF16177 Acetyl-coenzyme A synthetase N-terminus KU053_00875 PF00501 AMP-binding enzyme KU053_00875 PF13193 AMP-binding enzyme C-terminal domain KU053_00880 PF00857 Isochorismatase family KU053_00885 PF01037 Lrp/AsnC ligand binding domain KU053_00890 PF00872 Transposase, Mutator family KU053_00895 PF00296 Luciferase-like monooxygenase KU053_00900 PF03358 NADPH-dependent FMN reductase KU053_00905 PF00196 Bacterial regulatory proteins, luxR family KU053_00905 PF00072 Response regulator receiver domain KU053_00915 PF00672 HAMP domain KU053_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_00915 PF00512 His Kinase A (phospho-acceptor) domain KU053_00915 PF01627 Hpt domain KU053_00915 PF00072 Response regulator receiver domain KU053_00920 PF04341 Protein of unknown function, DUF485 KU053_00925 PF00474 Sodium:solute symporter family KU053_00935 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_00945 PF00990 Diguanylate cyclase, GGDEF domain KU053_00955 PF17755 UvrA DNA-binding domain KU053_00955 PF00005 ABC transporter KU053_00955 PF17760 UvrA interaction domain KU053_00960 PF16925 Tetracyclin repressor-like, C-terminal domain KU053_00960 PF00440 Bacterial regulatory proteins, tetR family KU053_00965 PF00107 Zinc-binding dehydrogenase KU053_00965 PF08240 Alcohol dehydrogenase GroES-like domain KU053_00975 PF06942 GlpM protein KU053_00980 PF08543 Phosphomethylpyrimidine kinase KU053_00980 PF02581 Thiamine monophosphate synthase KU053_00980 PF03070 TENA/THI-4/PQQC family KU053_00990 PF07690 Major Facilitator Superfamily KU053_00995 PF00436 Single-strand binding protein family KU053_01005 PF03591 AzlC protein KU053_01015 PF00324 Amino acid permease KU053_01020 PF00392 Bacterial regulatory proteins, gntR family KU053_01020 PF00155 Aminotransferase class I and II KU053_01025 PF00202 Aminotransferase class-III KU053_01030 PF00171 Aldehyde dehydrogenase family KU053_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_01040 PF00857 Isochorismatase family KU053_01045 PF02678 Pirin KU053_01045 PF05726 Pirin C-terminal cupin domain KU053_01065 PF10544 T5orf172 domain KU053_01070 PF13614 AAA domain KU053_01090 PF00905 Penicillin binding protein transpeptidase domain KU053_01120 PF07690 Major Facilitator Superfamily KU053_01125 PF03466 LysR substrate binding domain KU053_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_01145 PF00248 Aldo/keto reductase family KU053_01180 PF01638 HxlR-like helix-turn-helix KU053_01185 PF02525 Flavodoxin-like fold KU053_01205 PF02705 K+ potassium transporter KU053_01230 PF00230 Major intrinsic protein KU053_01245 PF00977 Histidine biosynthesis protein KU053_01250 PF01636 Phosphotransferase enzyme family KU053_01265 PF03992 Antibiotic biosynthesis monooxygenase KU053_01280 PF00977 Histidine biosynthesis protein KU053_01295 PF00117 Glutamine amidotransferase class-I KU053_01300 PF00475 Imidazoleglycerol-phosphate dehydratase KU053_01320 PF00583 Acetyltransferase (GNAT) family KU053_01325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KU053_01325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KU053_01335 PF00672 HAMP domain KU053_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_01335 PF00512 His Kinase A (phospho-acceptor) domain KU053_01340 PF00072 Response regulator receiver domain KU053_01340 PF00486 Transcriptional regulatory protein, C terminal KU053_01345 PF17674 HHH domain KU053_01345 PF00575 S1 RNA binding domain KU053_01345 PF09371 Tex-like protein N-terminal domain KU053_01345 PF16921 Tex protein YqgF-like domain KU053_01350 PF01740 STAS domain KU053_01350 PF00916 Sulfate permease family KU053_01355 PF00106 short chain dehydrogenase KU053_01360 PF01053 Cys/Met metabolism PLP-dependent enzyme KU053_01365 PF12848 ABC transporter KU053_01365 PF00005 ABC transporter KU053_01390 PF04191 Phospholipid methyltransferase KU053_01410 PF00529 HlyD membrane-fusion protein of T1SS KU053_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_01415 PF00873 AcrB/AcrD/AcrF family KU053_01420 PF01545 Cation efflux family KU053_01450 PF00324 Amino acid permease KU053_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU053_01480 PF01795 MraW methylase family KU053_01490 PF03717 Penicillin-binding Protein dimerisation domain KU053_01490 PF00905 Penicillin binding protein transpeptidase domain KU053_01495 PF02875 Mur ligase family, glutamate ligase domain KU053_01495 PF01225 Mur ligase family, catalytic domain KU053_01495 PF08245 Mur ligase middle domain KU053_01500 PF01225 Mur ligase family, catalytic domain KU053_01500 PF02875 Mur ligase family, glutamate ligase domain KU053_01500 PF08245 Mur ligase middle domain KU053_01505 PF00953 Glycosyl transferase family 4 KU053_01515 PF13847 Methyltransferase domain KU053_01520 PF00905 Penicillin binding protein transpeptidase domain KU053_01520 PF17092 Penicillin-binding protein OB-like domain KU053_01520 PF00912 Transglycosylase KU053_01525 PF11104 Type IV pilus assembly protein PilM; KU053_01530 PF05137 Fimbrial assembly protein (PilN) KU053_01535 PF04350 Pilus assembly protein, PilO KU053_01545 PF07660 Secretin and TonB N terminus short domain KU053_01545 PF03958 Bacterial type II/III secretion system short domain KU053_01545 PF00263 Bacterial type II and III secretion system protein KU053_01545 PF11741 AMIN domain KU053_01550 PF01202 Shikimate kinase KU053_01555 PF01761 3-dehydroquinate synthase KU053_01565 PF01493 GXGXG motif KU053_01565 PF01645 Conserved region in glutamate synthase KU053_01565 PF04898 Glutamate synthase central domain KU053_01565 PF00310 Glutamine amidotransferases class-II KU053_01570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KU053_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_01580 PF04011 LemA family KU053_01585 PF04536 TPM domain KU053_01595 PF07963 Prokaryotic N-terminal methylation motif KU053_01595 PF00114 Pilin (bacterial filament) KU053_01605 PF11846 Virulence factor membrane-bound polymerase, C-terminal KU053_01605 PF04932 O-Antigen ligase KU053_01605 PF15864 Protein glycosylation ligase KU053_01610 PF00210 Ferritin-like domain KU053_01615 PF04324 BFD-like [2Fe-2S] binding domain KU053_01620 PF01042 Endoribonuclease L-PSP KU053_01625 PF02824 TGS domain KU053_01625 PF04607 Region found in RelA / SpoT proteins KU053_01625 PF13291 ACT domain KU053_01635 PF01192 RNA polymerase Rpb6 KU053_01640 PF00625 Guanylate kinase KU053_01645 PF02401 LytB protein KU053_01685 PF00886 Ribosomal protein S16 KU053_01690 PF01782 RimM N-terminal domain KU053_01690 PF05239 PRC-barrel domain KU053_01695 PF01746 tRNA (Guanine-1)-methyltransferase KU053_01700 PF01245 Ribosomal protein L19 KU053_01705 PF00561 alpha/beta hydrolase fold KU053_01710 PF03280 Proteobacterial lipase chaperone protein KU053_01715 PF09157 Pseudouridine synthase II TruB, C-terminal KU053_01715 PF16198 tRNA pseudouridylate synthase B C-terminal domain KU053_01715 PF01509 TruB family pseudouridylate synthase (N terminal domain) KU053_01720 PF01925 Sulfite exporter TauE/SafE KU053_01730 PF00892 EamA-like transporter family KU053_01735 PF00892 EamA-like transporter family KU053_01740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU053_01740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU053_01745 PF02913 FAD linked oxidases, C-terminal domain KU053_01745 PF01565 FAD binding domain KU053_01755 PF03992 Antibiotic biosynthesis monooxygenase KU053_01760 PF02525 Flavodoxin-like fold KU053_01770 PF07690 Major Facilitator Superfamily KU053_01775 PF12805 FUSC-like inner membrane protein yccS KU053_01780 PF00080 Copper/zinc superoxide dismutase (SODC) KU053_01785 PF01594 AI-2E family transporter KU053_01790 PF13614 AAA domain KU053_01820 PF00324 Amino acid permease KU053_01825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU053_01825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU053_01830 PF00202 Aminotransferase class-III KU053_01835 PF04958 Arginine N-succinyltransferase beta subunit KU053_01840 PF00171 Aldehyde dehydrogenase family KU053_01845 PF04996 Succinylarginine dihydrolase KU053_01850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KU053_01865 PF05922 Peptidase inhibitor I9 KU053_01865 PF00082 Subtilase family KU053_01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_01880 PF03466 LysR substrate binding domain KU053_01885 PF00892 EamA-like transporter family KU053_01895 PF02092 Glycyl-tRNA synthetase beta subunit KU053_01895 PF05746 DALR anticodon binding domain KU053_01900 PF02091 Glycyl-tRNA synthetase alpha subunit KU053_01925 PF00571 CBS domain KU053_01930 PF04024 PspC domain KU053_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_01940 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_01940 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU053_01940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_01950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KU053_01950 PF08501 Shikimate dehydrogenase substrate binding domain KU053_01950 PF01488 Shikimate / quinate 5-dehydrogenase KU053_01955 PF01218 Coproporphyrinogen III oxidase KU053_01960 PF00925 GTP cyclohydrolase II KU053_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KU053_01965 PF02779 Transketolase, pyrimidine binding domain KU053_01965 PF02780 Transketolase, C-terminal domain KU053_01970 PF00459 Inositol monophosphatase family KU053_01975 PF03880 DbpA RNA binding domain KU053_01975 PF00271 Helicase conserved C-terminal domain KU053_01975 PF12343 Cold shock protein DEAD box A KU053_01975 PF00270 DEAD/DEAH box helicase KU053_01985 PF00005 ABC transporter KU053_01990 PF02405 Permease MlaE KU053_02000 PF05494 MlaC protein KU053_02010 PF01544 CorA-like Mg2+ transporter protein KU053_02015 PF03641 Possible lysine decarboxylase KU053_02020 PF00293 NUDIX domain KU053_02025 PF00156 Phosphoribosyl transferase domain KU053_02030 PF17191 RecG wedge domain KU053_02030 PF00270 DEAD/DEAH box helicase KU053_02030 PF00271 Helicase conserved C-terminal domain KU053_02045 PF01553 Acyltransferase KU053_02055 PF00375 Sodium:dicarboxylate symporter family KU053_02065 PF01926 50S ribosome-binding GTPase KU053_02070 PF02082 Transcriptional regulator KU053_02075 PF00175 Oxidoreductase NAD-binding domain KU053_02075 PF00042 Globin KU053_02075 PF00970 Oxidoreductase FAD-binding domain KU053_02080 PF05872 Bacterial protein of unknown function (DUF853) KU053_02085 PF01053 Cys/Met metabolism PLP-dependent enzyme KU053_02090 PF00117 Glutamine amidotransferase class-I KU053_02095 PF00338 Ribosomal protein S10p/S20e KU053_02100 PF00297 Ribosomal protein L3 KU053_02105 PF00573 Ribosomal protein L4/L1 family KU053_02110 PF00276 Ribosomal protein L23 KU053_02115 PF03947 Ribosomal Proteins L2, C-terminal domain KU053_02115 PF00181 Ribosomal Proteins L2, RNA binding domain KU053_02120 PF00203 Ribosomal protein S19 KU053_02125 PF00237 Ribosomal protein L22p/L17e KU053_02130 PF00189 Ribosomal protein S3, C-terminal domain KU053_02130 PF07650 KH domain KU053_02135 PF00252 Ribosomal protein L16p/L10e KU053_02140 PF00831 Ribosomal L29 protein KU053_02145 PF00366 Ribosomal protein S17 KU053_02150 PF00238 Ribosomal protein L14p/L23e KU053_02155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KU053_02155 PF00467 KOW motif KU053_02160 PF00281 Ribosomal protein L5 KU053_02160 PF00673 ribosomal L5P family C-terminus KU053_02165 PF00253 Ribosomal protein S14p/S29e KU053_02170 PF00410 Ribosomal protein S8 KU053_02175 PF00347 Ribosomal protein L6 KU053_02180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KU053_02185 PF00333 Ribosomal protein S5, N-terminal domain KU053_02185 PF03719 Ribosomal protein S5, C-terminal domain KU053_02190 PF00327 Ribosomal protein L30p/L7e KU053_02195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KU053_02200 PF00344 SecY translocase KU053_02205 PF00444 Ribosomal protein L36 KU053_02210 PF00416 Ribosomal protein S13/S18 KU053_02215 PF00411 Ribosomal protein S11 KU053_02220 PF01479 S4 domain KU053_02220 PF00163 Ribosomal protein S4/S9 N-terminal domain KU053_02225 PF01000 RNA polymerase Rpb3/RpoA insert domain KU053_02225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KU053_02225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KU053_02230 PF01196 Ribosomal protein L17 KU053_02235 PF00743 Flavin-binding monooxygenase-like KU053_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_02240 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_02245 PF03937 Flavinator of succinate dehydrogenase KU053_02275 PF09526 Probable metal-binding protein (DUF2387) KU053_02280 PF01432 Peptidase family M3 KU053_02285 PF08461 Ribonuclease R winged-helix domain KU053_02285 PF08206 Ribonuclease B OB domain KU053_02285 PF00773 RNB domain KU053_02285 PF00575 S1 RNA binding domain KU053_02285 PF17876 Cold shock domain KU053_02330 PF01557 Fumarylacetoacetate (FAA) hydrolase family KU053_02335 PF12833 Helix-turn-helix domain KU053_02340 PF00892 EamA-like transporter family KU053_02345 PF03631 Virulence factor BrkB KU053_02350 PF03358 NADPH-dependent FMN reductase KU053_02375 PF02130 Uncharacterized protein family UPF0054 KU053_02380 PF02562 PhoH-like protein KU053_02385 PF04055 Radical SAM superfamily KU053_02385 PF01938 TRAM domain KU053_02385 PF00919 Uncharacterized protein family UPF0004 KU053_02390 PF01551 Peptidase family M23 KU053_02390 PF10145 Phage-related minor tail protein KU053_02390 PF01464 Transglycosylase SLT domain KU053_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain KU053_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KU053_02420 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KU053_02425 PF01066 CDP-alcohol phosphatidyltransferase KU053_02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_02470 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_02475 PF17932 Tetracyclin repressor-like, C-terminal domain KU053_02475 PF00440 Bacterial regulatory proteins, tetR family KU053_02490 PF01039 Carboxyl transferase domain KU053_02495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_02495 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_02495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_02505 PF02785 Biotin carboxylase C-terminal domain KU053_02505 PF00364 Biotin-requiring enzyme KU053_02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_02505 PF00289 Biotin carboxylase, N-terminal domain KU053_02515 PF04386 Stringent starvation protein B KU053_02520 PF13417 Glutathione S-transferase, N-terminal domain KU053_02520 PF00043 Glutathione S-transferase, C-terminal domain KU053_02525 PF00380 Ribosomal protein S9/S16 KU053_02530 PF00572 Ribosomal protein L13 KU053_02535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KU053_02540 PF00398 Ribosomal RNA adenine dimethylase KU053_02545 PF00149 Calcineurin-like phosphoesterase KU053_02565 PF01926 50S ribosome-binding GTPase KU053_02565 PF16360 GTP-binding GTPase Middle Region KU053_02565 PF13167 GTP-binding GTPase N-terminal KU053_02575 PF13091 PLD-like domain KU053_02580 PF10518 TAT (twin-arginine translocation) pathway signal sequence KU053_02580 PF00149 Calcineurin-like phosphoesterase KU053_02585 PF00691 OmpA family KU053_02585 PF01389 OmpA-like transmembrane domain KU053_02590 PF17152 Periplasmic sensor domain KU053_02590 PF00990 Diguanylate cyclase, GGDEF domain KU053_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_02625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU053_02635 PF04273 Putative phosphatase (DUF442) KU053_02635 PF00753 Metallo-beta-lactamase superfamily KU053_02640 PF00561 alpha/beta hydrolase fold KU053_02645 PF00085 Thioredoxin KU053_02650 PF03061 Thioesterase superfamily KU053_02660 PF04461 Protein of unknown function (DUF520) KU053_02670 PF01266 FAD dependent oxidoreductase KU053_02670 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU053_02680 PF03795 YCII-related domain KU053_02685 PF04279 Intracellular septation protein A KU053_02690 PF02811 PHP domain KU053_02695 PF01062 Bestrophin, RFP-TM, chloride channel KU053_02700 PF04002 RadC-like JAB domain KU053_02705 PF04127 DNA / pantothenate metabolism flavoprotein KU053_02705 PF02441 Flavoprotein KU053_02710 PF07549 SecD/SecF GG Motif KU053_02710 PF02355 Protein export membrane protein KU053_02715 PF07549 SecD/SecF GG Motif KU053_02715 PF13721 SecD export protein N-terminal TM region KU053_02715 PF02355 Protein export membrane protein KU053_02720 PF02699 Preprotein translocase subunit KU053_02725 PF01702 Queuine tRNA-ribosyltransferase KU053_02740 PF02547 Queuosine biosynthesis protein KU053_02765 PF07689 KaiB domain KU053_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_02765 PF00512 His Kinase A (phospho-acceptor) domain KU053_02770 PF08335 GlnD PII-uridylyltransferase KU053_02770 PF03710 Glutamate-ammonia ligase adenylyltransferase KU053_02775 PF01063 Amino-transferase class IV KU053_02790 PF01522 Polysaccharide deacetylase KU053_02795 PF00535 Glycosyl transferase family 2 KU053_02800 PF13439 Glycosyltransferase Family 4 KU053_02800 PF00534 Glycosyl transferases group 1 KU053_02835 PF17101 Stealth protein CR1, conserved region 1 KU053_02835 PF11380 Stealth protein CR2, conserved region 2 KU053_02835 PF17102 Stealth protein CR3, conserved region 3 KU053_02840 PF02938 GAD domain KU053_02840 PF00152 tRNA synthetases class II (D, K and N) KU053_02840 PF01336 OB-fold nucleic acid binding domain KU053_02850 PF00593 TonB dependent receptor KU053_02850 PF07715 TonB-dependent Receptor Plug Domain KU053_02870 PF06146 Phosphate-starvation-inducible E KU053_02875 PF02798 Glutathione S-transferase, N-terminal domain KU053_02875 PF00043 Glutathione S-transferase, C-terminal domain KU053_02880 PF03466 LysR substrate binding domain KU053_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_02885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_02885 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU053_02885 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_02885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_02890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_02890 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU053_02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_02890 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_02900 PF00672 HAMP domain KU053_02900 PF00512 His Kinase A (phospho-acceptor) domain KU053_02905 PF00072 Response regulator receiver domain KU053_02905 PF00486 Transcriptional regulatory protein, C terminal KU053_02910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KU053_02930 PF01923 Cobalamin adenosyltransferase KU053_02935 PF00593 TonB dependent receptor KU053_02935 PF07715 TonB-dependent Receptor Plug Domain KU053_02940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KU053_02945 PF00291 Pyridoxal-phosphate dependent enzyme KU053_02970 PF00290 Tryptophan synthase alpha chain KU053_02975 PF01039 Carboxyl transferase domain KU053_02980 PF02875 Mur ligase family, glutamate ligase domain KU053_02980 PF08245 Mur ligase middle domain KU053_02995 PF00753 Metallo-beta-lactamase superfamily KU053_03000 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU053_03000 PF00578 AhpC/TSA family KU053_03005 PF02810 SEC-C motif KU053_03005 PF07517 SecA DEAD-like domain KU053_03005 PF01043 SecA preprotein cross-linking domain KU053_03005 PF07516 SecA Wing and Scaffold domain KU053_03015 PF07690 Major Facilitator Superfamily KU053_03015 PF00083 Sugar (and other) transporter KU053_03020 PF03006 Haemolysin-III related KU053_03045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU053_03045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU053_03045 PF00378 Enoyl-CoA hydratase/isomerase KU053_03050 PF02803 Thiolase, C-terminal domain KU053_03050 PF00108 Thiolase, N-terminal domain KU053_03055 PF02311 AraC-like ligand binding domain KU053_03055 PF12833 Helix-turn-helix domain KU053_03060 PF02515 CoA-transferase family III KU053_03065 PF04966 Carbohydrate-selective porin, OprB family KU053_03070 PF01011 PQQ enzyme repeat KU053_03075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU053_03075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU053_03085 PF00893 Small Multidrug Resistance protein KU053_03095 PF00108 Thiolase, N-terminal domain KU053_03095 PF02803 Thiolase, C-terminal domain KU053_03105 PF00691 OmpA family KU053_03105 PF13505 Outer membrane protein beta-barrel domain KU053_03115 PF01139 tRNA-splicing ligase RtcB KU053_03120 PF00324 Amino acid permease KU053_03125 PF05175 Methyltransferase small domain KU053_03125 PF08468 Methyltransferase small domain N-terminal KU053_03130 PF00860 Permease family KU053_03135 PF00679 Elongation factor G C-terminus KU053_03135 PF00009 Elongation factor Tu GTP binding domain KU053_03135 PF03144 Elongation factor Tu domain 2 KU053_03140 PF01741 Large-conductance mechanosensitive channel, MscL KU053_03155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KU053_03155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KU053_03155 PF06827 Zinc finger found in FPG and IleRS KU053_03160 PF02245 Methylpurine-DNA glycosylase (MPG) KU053_03165 PF00593 TonB dependent receptor KU053_03165 PF07715 TonB-dependent Receptor Plug Domain KU053_03180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_03195 PF13098 Thioredoxin-like domain KU053_03195 PF10411 Disulfide bond isomerase protein N-terminus KU053_03200 PF01571 Aminomethyltransferase folate-binding domain KU053_03210 PF04343 Protein of unknown function, DUF488 KU053_03215 PF03831 PhnA domain KU053_03215 PF08274 PhnA Zinc-Ribbon KU053_03220 PF07411 Domain of unknown function (DUF1508) KU053_03225 PF03129 Anticodon binding domain KU053_03225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU053_03225 PF04073 Aminoacyl-tRNA editing domain KU053_03230 PF00873 AcrB/AcrD/AcrF family KU053_03245 PF00072 Response regulator receiver domain KU053_03250 PF00072 Response regulator receiver domain KU053_03255 PF01584 CheW-like domain KU053_03260 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KU053_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU053_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_03265 PF01584 CheW-like domain KU053_03265 PF01627 Hpt domain KU053_03265 PF00072 Response regulator receiver domain KU053_03275 PF07687 Peptidase dimerisation domain KU053_03275 PF01546 Peptidase family M20/M25/M40 KU053_03280 PF08085 Entericidin EcnA/B family KU053_03290 PF04304 Protein of unknown function (DUF454) KU053_03295 PF03734 L,D-transpeptidase catalytic domain KU053_03295 PF17969 L,D-transpeptidase C-terminal domain KU053_03335 PF00175 Oxidoreductase NAD-binding domain KU053_03335 PF00258 Flavodoxin KU053_03335 PF00667 FAD binding domain KU053_03345 PF12805 FUSC-like inner membrane protein yccS KU053_03350 PF07690 Major Facilitator Superfamily KU053_03355 PF00881 Nitroreductase family KU053_03370 PF01235 Sodium:alanine symporter family KU053_03375 PF01734 Patatin-like phospholipase KU053_03380 PF00291 Pyridoxal-phosphate dependent enzyme KU053_03380 PF13291 ACT domain KU053_03385 PF05992 SbmA/BacA-like family KU053_03415 PF02934 GatB/GatE catalytic domain KU053_03415 PF02637 GatB domain KU053_03420 PF01425 Amidase KU053_03425 PF02686 Glu-tRNAGln amidotransferase C subunit KU053_03435 PF04085 rod shape-determining protein MreC KU053_03440 PF04093 rod shape-determining protein MreD KU053_03445 PF02545 Maf-like protein KU053_03450 PF00575 S1 RNA binding domain KU053_03450 PF10150 Ribonuclease E/G family KU053_03460 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KU053_03460 PF06974 Protein of unknown function (DUF1298) KU053_03465 PF01507 Phosphoadenosine phosphosulfate reductase family KU053_03480 PF02525 Flavodoxin-like fold KU053_03500 PF02673 Bacitracin resistance protein BacA KU053_03505 PF06719 AraC-type transcriptional regulator N-terminus KU053_03505 PF12833 Helix-turn-helix domain KU053_03510 PF14765 Polyketide synthase dehydratase KU053_03510 PF00550 Phosphopantetheine attachment site KU053_03510 PF08659 KR domain KU053_03510 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_03510 PF16197 Ketoacyl-synthetase C-terminal extension KU053_03510 PF08990 Erythronolide synthase docking KU053_03510 PF08240 Alcohol dehydrogenase GroES-like domain KU053_03510 PF00698 Acyl transferase domain KU053_03510 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_03510 PF09277 Erythronolide synthase, docking KU053_03515 PF01965 DJ-1/PfpI family KU053_03525 PF00324 Amino acid permease KU053_03530 PF04303 PrpF protein KU053_03535 PF00348 Polyprenyl synthetase KU053_03540 PF04237 YjbR KU053_03545 PF01145 SPFH domain / Band 7 family KU053_03555 PF01734 Patatin-like phospholipase KU053_03885 PF08019 Phosphoethanolamine transferase EptA/EptB KU053_03885 PF00884 Sulfatase KU053_03890 PF00072 Response regulator receiver domain KU053_03890 PF00486 Transcriptional regulatory protein, C terminal KU053_03895 PF08521 Two-component sensor kinase N-terminal KU053_03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_03895 PF00512 His Kinase A (phospho-acceptor) domain KU053_03905 PF00909 Ammonium Transporter Family KU053_03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_03910 PF03466 LysR substrate binding domain KU053_03930 PF00133 tRNA synthetases class I (I, L, M and V) KU053_03930 PF08264 Anticodon-binding domain of tRNA KU053_03930 PF10458 Valyl tRNA synthetase tRNA binding arm KU053_03950 PF01906 Putative heavy-metal-binding KU053_03955 PF01906 Putative heavy-metal-binding KU053_03960 PF02321 Outer membrane efflux protein KU053_03965 PF00873 AcrB/AcrD/AcrF family KU053_03970 PF00529 HlyD membrane-fusion protein of T1SS KU053_03970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_03975 PF01569 PAP2 superfamily KU053_03985 PF00348 Polyprenyl synthetase KU053_03995 PF00829 Ribosomal prokaryotic L21 protein KU053_04000 PF01016 Ribosomal L27 protein KU053_04005 PF03548 Outer membrane lipoprotein carrier protein LolA KU053_04015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU053_04015 PF02403 Seryl-tRNA synthetase N-terminal domain KU053_04020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU053_04020 PF10414 Sirohaem synthase dimerisation region KU053_04020 PF14824 Sirohaem biosynthesis protein central KU053_04025 PF00588 SpoU rRNA Methylase family KU053_04030 PF01638 HxlR-like helix-turn-helix KU053_04035 PF03358 NADPH-dependent FMN reductase KU053_04040 PF13520 Amino acid permease KU053_04045 PF00465 Iron-containing alcohol dehydrogenase KU053_04055 PF03099 Biotin/lipoate A/B protein ligase family KU053_04060 PF04359 Protein of unknown function (DUF493) KU053_04065 PF04546 Sigma-70, non-essential region KU053_04065 PF03979 Sigma-70 factor, region 1.1 KU053_04065 PF00140 Sigma-70 factor, region 1.2 KU053_04065 PF04542 Sigma-70 region 2 KU053_04065 PF04539 Sigma-70 region 3 KU053_04065 PF04545 Sigma-70, region 4 KU053_04085 PF17773 UPF0176 acylphosphatase like domain KU053_04085 PF00581 Rhodanese-like domain KU053_04095 PF00285 Citrate synthase, C-terminal domain KU053_04100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU053_04105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU053_04110 PF00890 FAD binding domain KU053_04110 PF02910 Fumarate reductase flavoprotein C-term KU053_04115 PF13085 2Fe-2S iron-sulfur cluster binding domain KU053_04130 PF16078 2-oxoglutarate dehydrogenase N-terminus KU053_04130 PF00676 Dehydrogenase E1 component KU053_04130 PF16870 2-oxoglutarate dehydrogenase C-terminal KU053_04130 PF02779 Transketolase, pyrimidine binding domain KU053_04135 PF00364 Biotin-requiring enzyme KU053_04135 PF02817 e3 binding domain KU053_04135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU053_04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_04140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU053_04145 PF08442 ATP-grasp domain KU053_04145 PF00549 CoA-ligase KU053_04150 PF00549 CoA-ligase KU053_04150 PF02629 CoA binding domain KU053_04155 PF00579 tRNA synthetases class I (W and Y) KU053_04160 PF05661 Protein of unknown function (DUF808) KU053_04165 PF04228 Putative neutral zinc metallopeptidase KU053_04170 PF00999 Sodium/hydrogen exchanger family KU053_04200 PF09587 Bacterial capsule synthesis protein PGA_cap KU053_04210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU053_04215 PF00582 Universal stress protein family KU053_04220 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_04225 PF01272 Transcription elongation factor, GreA/GreB, C-term KU053_04225 PF03449 Transcription elongation factor, N-terminal KU053_04230 PF02142 MGS-like domain KU053_04230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_04230 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KU053_04235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KU053_04235 PF00117 Glutamine amidotransferase class-I KU053_04250 PF01985 CRS1 / YhbY (CRM) domain KU053_04255 PF01728 FtsJ-like methyltransferase KU053_04260 PF17862 AAA+ lid domain KU053_04260 PF06480 FtsH Extracellular KU053_04260 PF01434 Peptidase family M41 KU053_04260 PF00004 ATPase family associated with various cellular activities (AAA) KU053_04265 PF00809 Pterin binding enzyme KU053_04285 PF09423 PhoD-like phosphatase KU053_04285 PF16655 PhoD-like phosphatase, N-terminal domain KU053_04300 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KU053_04300 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KU053_04315 PF00083 Sugar (and other) transporter KU053_04320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KU053_04320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KU053_04325 PF01266 FAD dependent oxidoreductase KU053_04325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KU053_04330 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KU053_04330 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KU053_04335 PF00781 Diacylglycerol kinase catalytic domain KU053_04340 PF00149 Calcineurin-like phosphoesterase KU053_04350 PF00166 Chaperonin 10 Kd subunit KU053_04355 PF00118 TCP-1/cpn60 chaperonin family KU053_04360 PF01219 Prokaryotic diacylglycerol kinase KU053_04365 PF00753 Metallo-beta-lactamase superfamily KU053_04370 PF03009 Glycerophosphoryl diester phosphodiesterase family KU053_04375 PF00873 AcrB/AcrD/AcrF family KU053_04385 PF01435 Peptidase family M48 KU053_04390 PF01464 Transglycosylase SLT domain KU053_04395 PF01171 PP-loop family KU053_04405 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU053_04405 PF01464 Transglycosylase SLT domain KU053_04410 PF01272 Transcription elongation factor, GreA/GreB, C-term KU053_04410 PF03449 Transcription elongation factor, N-terminal KU053_04425 PF00550 Phosphopantetheine attachment site KU053_04425 PF13193 AMP-binding enzyme C-terminal domain KU053_04425 PF00501 AMP-binding enzyme KU053_04425 PF00975 Thioesterase domain KU053_04425 PF00668 Condensation domain KU053_04450 PF00881 Nitroreductase family KU053_04465 PF02595 Glycerate kinase family KU053_04470 PF00384 Molybdopterin oxidoreductase KU053_04475 PF02634 FdhD/NarQ family KU053_04480 PF06803 Protein of unknown function (DUF1232) KU053_04485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU053_04485 PF11890 Domain of unknown function (DUF3410) KU053_04485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU053_04490 PF00152 tRNA synthetases class II (D, K and N) KU053_04500 PF18073 Rubredoxin metal binding domain KU053_04505 PF00324 Amino acid permease KU053_04515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KU053_04515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU053_04520 PF01678 Diaminopimelate epimerase KU053_04525 PF01810 LysE type translocator KU053_04530 PF02899 Phage integrase, N-terminal SAM-like domain KU053_04530 PF00589 Phage integrase family KU053_04535 PF01012 Electron transfer flavoprotein domain KU053_04540 PF01012 Electron transfer flavoprotein domain KU053_04540 PF00766 Electron transfer flavoprotein FAD-binding domain KU053_04545 PF00521 DNA gyrase/topoisomerase IV, subunit A KU053_04545 PF03989 DNA gyrase C-terminal domain, beta-propeller KU053_04560 PF00535 Glycosyl transferase family 2 KU053_04580 PF13533 Biotin-lipoyl like KU053_04590 PF00266 Aminotransferase class-V KU053_04605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KU053_04615 PF02687 FtsX-like permease family KU053_04615 PF12704 MacB-like periplasmic core domain KU053_04620 PF00005 ABC transporter KU053_04625 PF13567 Domain of unknown function (DUF4131) KU053_04625 PF00753 Metallo-beta-lactamase superfamily KU053_04625 PF03772 Competence protein KU053_04635 PF06965 Na+/H+ antiporter 1 KU053_04635 PF01343 Peptidase family S49 KU053_04640 PF12697 Alpha/beta hydrolase family KU053_04645 PF00551 Formyl transferase KU053_04650 PF00586 AIR synthase related protein, N-terminal domain KU053_04650 PF02769 AIR synthase related protein, C-terminal domain KU053_04655 PF01594 AI-2E family transporter KU053_04660 PF00308 Bacterial dnaA protein KU053_04660 PF08299 Bacterial dnaA protein helix-turn-helix KU053_04660 PF11638 DnaA N-terminal domain KU053_04690 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU053_04690 PF00588 SpoU rRNA Methylase family KU053_04695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KU053_04705 PF00691 OmpA family KU053_04710 PF07676 WD40-like Beta Propeller Repeat KU053_04710 PF04052 TolB amino-terminal domain KU053_04720 PF02472 Biopolymer transport protein ExbD/TolR KU053_04725 PF01618 MotA/TolQ/ExbB proton channel family KU053_04730 PF03061 Thioesterase superfamily KU053_04735 PF01546 Peptidase family M20/M25/M40 KU053_04735 PF07687 Peptidase dimerisation domain KU053_04740 PF05496 Holliday junction DNA helicase RuvB P-loop domain KU053_04740 PF05491 RuvB C-terminal winged helix domain KU053_04740 PF17864 RuvB AAA lid domain KU053_04745 PF01330 RuvA N terminal domain KU053_04745 PF07499 RuvA, C-terminal domain KU053_04750 PF01966 HD domain KU053_04755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KU053_04755 PF02769 AIR synthase related protein, C-terminal domain KU053_04755 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KU053_04760 PF07690 Major Facilitator Superfamily KU053_04765 PF01784 NIF3 (NGG1p interacting factor 3) KU053_04770 PF00378 Enoyl-CoA hydratase/isomerase KU053_04775 PF01467 Cytidylyltransferase-like KU053_04775 PF00293 NUDIX domain KU053_04785 PF00578 AhpC/TSA family KU053_04800 PF06508 Queuosine biosynthesis protein QueC KU053_04810 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KU053_04810 PF14602 Hexapeptide repeat of succinyl-transferase KU053_04810 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_04820 PF03466 LysR substrate binding domain KU053_04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_04825 PF12857 TOBE-like domain KU053_04825 PF00005 ABC transporter KU053_04830 PF00528 Binding-protein-dependent transport system inner membrane component KU053_04835 PF00528 Binding-protein-dependent transport system inner membrane component KU053_04850 PF01063 Amino-transferase class IV KU053_04855 PF02618 YceG-like family KU053_04860 PF02223 Thymidylate kinase KU053_04870 PF02910 Fumarate reductase flavoprotein C-term KU053_04870 PF00890 FAD binding domain KU053_04875 PF13180 PDZ domain KU053_04885 PF03144 Elongation factor Tu domain 2 KU053_04885 PF00009 Elongation factor Tu GTP binding domain KU053_04885 PF06421 GTP-binding protein LepA C-terminus KU053_04885 PF00679 Elongation factor G C-terminus KU053_04890 PF10502 Signal peptidase, peptidase S26 KU053_04900 PF14622 Ribonuclease-III-like KU053_04900 PF00035 Double-stranded RNA binding motif KU053_04905 PF01926 50S ribosome-binding GTPase KU053_04905 PF07650 KH domain KU053_04915 PF11967 Recombination protein O N terminal KU053_04915 PF02565 Recombination protein O C terminal KU053_04920 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KU053_04925 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KU053_04930 PF00106 short chain dehydrogenase KU053_04960 PF00155 Aminotransferase class I and II KU053_04970 PF00990 Diguanylate cyclase, GGDEF domain KU053_04970 PF17151 Periplasmic sensor domain KU053_04980 PF04851 Type III restriction enzyme, res subunit KU053_04980 PF00271 Helicase conserved C-terminal domain KU053_04980 PF02151 UvrB/uvrC motif KU053_04980 PF12344 Ultra-violet resistance protein B KU053_04980 PF17757 UvrB interaction domain KU053_04990 PF00892 EamA-like transporter family KU053_04995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU053_04995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU053_05010 PF01926 50S ribosome-binding GTPase KU053_05010 PF01018 GTP1/OBG KU053_05015 PF00696 Amino acid kinase family KU053_05015 PF01472 PUA domain KU053_05025 PF07759 Protein of unknown function (DUF1615) KU053_05030 PF01207 Dihydrouridine synthase (Dus) KU053_05035 PF03060 Nitronate monooxygenase KU053_05050 PF02350 UDP-N-acetylglucosamine 2-epimerase KU053_05080 PF03441 FAD binding domain of DNA photolyase KU053_05080 PF00875 DNA photolyase KU053_05085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_05095 PF00768 D-alanyl-D-alanine carboxypeptidase KU053_05095 PF07943 Penicillin-binding protein 5, C-terminal domain KU053_05105 PF03971 Monomeric isocitrate dehydrogenase KU053_05110 PF00849 RNA pseudouridylate synthase KU053_05115 PF00180 Isocitrate/isopropylmalate dehydrogenase KU053_05135 PF06779 Uncharacterised MFS-type transporter YbfB KU053_05140 PF03466 LysR substrate binding domain KU053_05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_05145 PF00375 Sodium:dicarboxylate symporter family KU053_05150 PF02567 Phenazine biosynthesis-like protein KU053_05155 PF05193 Peptidase M16 inactive domain KU053_05155 PF00675 Insulinase (Peptidase family M16) KU053_05180 PF02581 Thiamine monophosphate synthase KU053_05185 PF00202 Aminotransferase class-III KU053_05195 PF00849 RNA pseudouridylate synthase KU053_05200 PF18337 RapA N-terminal Tudor like domain KU053_05200 PF00176 SNF2 family N-terminal domain KU053_05200 PF18339 RapA N-terminal Tudor like domain 1 KU053_05200 PF12137 RNA polymerase recycling family C-terminal KU053_05200 PF00271 Helicase conserved C-terminal domain KU053_05210 PF00440 Bacterial regulatory proteins, tetR family KU053_05215 PF00175 Oxidoreductase NAD-binding domain KU053_05215 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_05215 PF00970 Oxidoreductase FAD-binding domain KU053_05220 PF00487 Fatty acid desaturase KU053_05230 PF00440 Bacterial regulatory proteins, tetR family KU053_05230 PF17754 MftR C-terminal domain KU053_05240 PF00202 Aminotransferase class-III KU053_05245 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU053_05250 PF00171 Aldehyde dehydrogenase family KU053_05255 PF01037 Lrp/AsnC ligand binding domain KU053_05260 PF00205 Thiamine pyrophosphate enzyme, central domain KU053_05260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU053_05260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU053_05265 PF00324 Amino acid permease KU053_05270 PF12849 PBP superfamily domain KU053_05275 PF00528 Binding-protein-dependent transport system inner membrane component KU053_05280 PF00528 Binding-protein-dependent transport system inner membrane component KU053_05285 PF00005 ABC transporter KU053_05290 PF08496 Peptidase family S49 N-terminal KU053_05290 PF01343 Peptidase family S49 KU053_05305 PF00206 Lyase KU053_05305 PF08328 Adenylosuccinate lyase C-terminal KU053_05310 PF04356 Protein of unknown function (DUF489) KU053_05320 PF13344 Haloacid dehalogenase-like hydrolase KU053_05320 PF00293 NUDIX domain KU053_05325 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_05330 PF00768 D-alanyl-D-alanine carboxypeptidase KU053_05330 PF07943 Penicillin-binding protein 5, C-terminal domain KU053_05345 PF01975 Survival protein SurE KU053_05350 PF01476 LysM domain KU053_05350 PF01551 Peptidase family M23 KU053_05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_05355 PF03466 LysR substrate binding domain KU053_05360 PF13654 AAA domain KU053_05360 PF05362 Lon protease (S16) C-terminal proteolytic domain KU053_05365 PF07690 Major Facilitator Superfamily KU053_05370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU053_05375 PF13593 SBF-like CPA transporter family (DUF4137) KU053_05380 PF01197 Ribosomal protein L31 KU053_05395 PF04055 Radical SAM superfamily KU053_05400 PF09285 Elongation factor P, C-terminal KU053_05400 PF08207 Elongation factor P (EF-P) KOW-like domain KU053_05400 PF01132 Elongation factor P (EF-P) OB domain KU053_05405 PF13722 5TM C-terminal transporter carbon starvation CstA KU053_05405 PF02554 Carbon starvation protein CstA KU053_05410 PF04328 Selenoprotein, putative KU053_05440 PF06018 CodY GAF-like domain KU053_05440 PF17853 GGDEF-like domain KU053_05440 PF13556 PucR C-terminal helix-turn-helix domain KU053_05455 PF00171 Aldehyde dehydrogenase family KU053_05460 PF00324 Amino acid permease KU053_05465 PF03466 LysR substrate binding domain KU053_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_05470 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_05475 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_05480 PF00355 Rieske [2Fe-2S] domain KU053_05480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU053_05485 PF00171 Aldehyde dehydrogenase family KU053_05490 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_05490 PF18113 Rubredoxin binding C-terminal domain KU053_05495 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU053_05495 PF01266 FAD dependent oxidoreductase KU053_05515 PF00892 EamA-like transporter family KU053_05525 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KU053_05530 PF00083 Sugar (and other) transporter KU053_05535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU053_05535 PF13378 Enolase C-terminal domain-like KU053_05540 PF16197 Ketoacyl-synthetase C-terminal extension KU053_05540 PF00698 Acyl transferase domain KU053_05540 PF08240 Alcohol dehydrogenase GroES-like domain KU053_05540 PF08990 Erythronolide synthase docking KU053_05540 PF09277 Erythronolide synthase, docking KU053_05540 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_05540 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_05540 PF08659 KR domain KU053_05540 PF00550 Phosphopantetheine attachment site KU053_05540 PF14765 Polyketide synthase dehydratase KU053_05545 PF00440 Bacterial regulatory proteins, tetR family KU053_05565 PF17954 Quercetinase C-terminal cupin domain KU053_05565 PF02678 Pirin KU053_05575 PF08348 YheO-like PAS domain KU053_05575 PF13309 HTH domain KU053_05585 PF00668 Condensation domain KU053_05585 PF00550 Phosphopantetheine attachment site KU053_05585 PF13193 AMP-binding enzyme C-terminal domain KU053_05585 PF00501 AMP-binding enzyme KU053_05590 PF00550 Phosphopantetheine attachment site KU053_05590 PF00501 AMP-binding enzyme KU053_05590 PF00975 Thioesterase domain KU053_05590 PF13193 AMP-binding enzyme C-terminal domain KU053_05590 PF00668 Condensation domain KU053_05595 PF01032 FecCD transport family KU053_05600 PF01032 FecCD transport family KU053_05605 PF00005 ABC transporter KU053_05610 PF01497 Periplasmic binding protein KU053_05615 PF07715 TonB-dependent Receptor Plug Domain KU053_05615 PF00593 TonB dependent receptor KU053_05620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU053_05625 PF00501 AMP-binding enzyme KU053_05625 PF00668 Condensation domain KU053_05625 PF00550 Phosphopantetheine attachment site KU053_05630 PF00501 AMP-binding enzyme KU053_05630 PF13193 AMP-binding enzyme C-terminal domain KU053_05635 PF00857 Isochorismatase family KU053_05635 PF00550 Phosphopantetheine attachment site KU053_05640 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU053_05650 PF00005 ABC transporter KU053_05655 PF00005 ABC transporter KU053_05660 PF00975 Thioesterase domain KU053_05670 PF00425 chorismate binding enzyme KU053_05680 PF01208 Uroporphyrinogen decarboxylase (URO-D) KU053_05685 PF05675 Protein of unknown function (DUF817) KU053_05700 PF00144 Beta-lactamase KU053_05710 PF01227 GTP cyclohydrolase I KU053_05715 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_05715 PF01799 [2Fe-2S] binding domain KU053_05720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KU053_05720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KU053_05735 PF00218 Indole-3-glycerol phosphate synthase KU053_05740 PF00591 Glycosyl transferase family, a/b domain KU053_05740 PF02885 Glycosyl transferase family, helical bundle domain KU053_05745 PF00593 TonB dependent receptor KU053_05745 PF07715 TonB-dependent Receptor Plug Domain KU053_05750 PF11838 ERAP1-like C-terminal domain KU053_05750 PF01433 Peptidase family M1 domain KU053_05755 PF00117 Glutamine amidotransferase class-I KU053_06115 PF13356 Arm DNA-binding domain KU053_06115 PF00589 Phage integrase family KU053_06125 PF00854 POT family KU053_06130 PF00120 Glutamine synthetase, catalytic domain KU053_06130 PF03951 Glutamine synthetase, beta-Grasp domain KU053_06135 PF04345 Chorismate lyase KU053_06140 PF01040 UbiA prenyltransferase family KU053_06175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KU053_06175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KU053_06180 PF01784 NIF3 (NGG1p interacting factor 3) KU053_06185 PF13180 PDZ domain KU053_06190 PF12627 Probable RNA and SrmB- binding site of polymerase A KU053_06190 PF01743 Poly A polymerase head domain KU053_06195 PF00390 Malic enzyme, N-terminal domain KU053_06195 PF03949 Malic enzyme, NAD binding domain KU053_06195 PF01515 Phosphate acetyl/butaryl transferase KU053_06200 PF00563 EAL domain KU053_06200 PF00990 Diguanylate cyclase, GGDEF domain KU053_06200 PF03707 Bacterial signalling protein N terminal repeat KU053_06205 PF04452 RNA methyltransferase KU053_06210 PF02219 Methylenetetrahydrofolate reductase KU053_06215 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KU053_06215 PF05221 S-adenosyl-L-homocysteine hydrolase KU053_06230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_06230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_06230 PF09317 Domain of unknown function (DUF1974) KU053_06235 PF04055 Radical SAM superfamily KU053_06240 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_06240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU053_06250 PF07690 Major Facilitator Superfamily KU053_06260 PF00557 Metallopeptidase family M24 KU053_06265 PF00318 Ribosomal protein S2 KU053_06270 PF00889 Elongation factor TS KU053_06280 PF12833 Helix-turn-helix domain KU053_06300 PF05036 Sporulation related domain KU053_06300 PF03330 Lytic transglycolase KU053_06305 PF13406 Transglycosylase SLT domain KU053_06310 PF01098 Cell cycle protein KU053_06320 PF14489 QueF-like protein KU053_06320 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KU053_06325 PF01061 ABC-2 type transporter KU053_06330 PF00005 ABC transporter KU053_06360 PF00464 Serine hydroxymethyltransferase KU053_06365 PF02321 Outer membrane efflux protein KU053_06370 PF00873 AcrB/AcrD/AcrF family KU053_06375 PF13533 Biotin-lipoyl like KU053_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_06380 PF03466 LysR substrate binding domain KU053_06385 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU053_06390 PF00528 Binding-protein-dependent transport system inner membrane component KU053_06395 PF00528 Binding-protein-dependent transport system inner membrane component KU053_06400 PF00005 ABC transporter KU053_06405 PF00893 Small Multidrug Resistance protein KU053_06410 PF00037 4Fe-4S binding domain KU053_06415 PF16325 Peptidase family U32 C-terminal domain KU053_06415 PF01136 Peptidase family U32 KU053_06420 PF00155 Aminotransferase class I and II KU053_06420 PF00392 Bacterial regulatory proteins, gntR family KU053_06425 PF02567 Phenazine biosynthesis-like protein KU053_06430 PF00970 Oxidoreductase FAD-binding domain KU053_06430 PF00175 Oxidoreductase NAD-binding domain KU053_06435 PF01980 tRNA-methyltransferase O KU053_06435 PF18389 TrmO C-terminal domain KU053_06445 PF00437 Type II/IV secretion system protein KU053_06445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU053_06455 PF00072 Response regulator receiver domain KU053_06455 PF00486 Transcriptional regulatory protein, C terminal KU053_06460 PF08521 Two-component sensor kinase N-terminal KU053_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_06460 PF00512 His Kinase A (phospho-acceptor) domain KU053_06470 PF00293 NUDIX domain KU053_06480 PF00905 Penicillin binding protein transpeptidase domain KU053_06480 PF14814 Bifunctional transglycosylase second domain KU053_06480 PF00912 Transglycosylase KU053_06485 PF01513 ATP-NAD kinase KU053_06490 PF07023 Protein of unknown function (DUF1315) KU053_06495 PF00591 Glycosyl transferase family, a/b domain KU053_06495 PF02885 Glycosyl transferase family, helical bundle domain KU053_06500 PF00375 Sodium:dicarboxylate symporter family KU053_06505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_06505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_06505 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_06510 PF00756 Putative esterase KU053_06515 PF01842 ACT domain KU053_06515 PF01817 Chorismate mutase type II KU053_06515 PF00800 Prephenate dehydratase KU053_06520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU053_06530 PF07687 Peptidase dimerisation domain KU053_06530 PF01546 Peptidase family M20/M25/M40 KU053_06535 PF12706 Beta-lactamase superfamily domain KU053_06545 PF03883 Peroxide stress protein YaaA KU053_06555 PF05690 Thiazole biosynthesis protein ThiG KU053_06565 PF04241 Protein of unknown function (DUF423) KU053_06570 PF00140 Sigma-70 factor, region 1.2 KU053_06570 PF04542 Sigma-70 region 2 KU053_06570 PF04545 Sigma-70, region 4 KU053_06580 PF00313 'Cold-shock' DNA-binding domain KU053_06585 PF00270 DEAD/DEAH box helicase KU053_06585 PF00271 Helicase conserved C-terminal domain KU053_06595 PF00881 Nitroreductase family KU053_06600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KU053_06600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KU053_06620 PF01180 Dihydroorotate dehydrogenase KU053_06625 PF02674 Colicin V production protein KU053_06630 PF00156 Phosphoribosyl transferase domain KU053_06645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU053_06645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU053_06650 PF01435 Peptidase family M48 KU053_06655 PF09424 Yqey-like protein KU053_06660 PF01165 Ribosomal protein S21 KU053_06665 PF00814 Glycoprotease family KU053_06685 PF00069 Protein kinase domain KU053_06710 PF03466 LysR substrate binding domain KU053_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_06715 PF00202 Aminotransferase class-III KU053_06720 PF00171 Aldehyde dehydrogenase family KU053_06725 PF00324 Amino acid permease KU053_06755 PF04076 Bacterial OB fold (BOF) protein KU053_06780 PF00561 alpha/beta hydrolase fold KU053_06785 PF03616 Sodium/glutamate symporter KU053_06795 PF07729 FCD domain KU053_06795 PF00392 Bacterial regulatory proteins, gntR family KU053_06845 PF08946 Osmosensory transporter coiled coil KU053_06845 PF00083 Sugar (and other) transporter KU053_06870 PF00155 Aminotransferase class I and II KU053_06875 PF02080 TrkA-C domain KU053_06875 PF06826 Predicted Permease Membrane Region KU053_06885 PF04403 Paraquat-inducible protein A KU053_06890 PF02470 MlaD protein KU053_06900 PF01177 Asp/Glu/Hydantoin racemase KU053_06905 PF00892 EamA-like transporter family KU053_06910 PF07995 Glucose / Sorbosone dehydrogenase KU053_06920 PF13610 DDE domain KU053_06930 PF01636 Phosphotransferase enzyme family KU053_06935 PF13610 DDE domain KU053_06950 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_06960 PF13610 DDE domain KU053_06975 PF00375 Sodium:dicarboxylate symporter family KU053_06985 PF16123 Hydroxyacylglutathione hydrolase C-terminus KU053_06985 PF00753 Metallo-beta-lactamase superfamily KU053_06990 PF00528 Binding-protein-dependent transport system inner membrane component KU053_06995 PF00005 ABC transporter KU053_06995 PF09383 NIL domain KU053_07000 PF03180 NLPA lipoprotein KU053_07005 PF02844 Phosphoribosylglycinamide synthetase, N domain KU053_07005 PF02843 Phosphoribosylglycinamide synthetase, C domain KU053_07005 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KU053_07010 PF01808 AICARFT/IMPCHase bienzyme KU053_07010 PF02142 MGS-like domain KU053_07015 PF02954 Bacterial regulatory protein, Fis family KU053_07035 PF01134 Glucose inhibited division protein A KU053_07035 PF13932 GidA associated domain KU053_07045 PF14403 Circularly permuted ATP-grasp type 2 KU053_07055 PF01841 Transglutaminase-like superfamily KU053_07055 PF08379 Bacterial transglutaminase-like N-terminal region KU053_07065 PF01168 Alanine racemase, N-terminal domain KU053_07065 PF00842 Alanine racemase, C-terminal domain KU053_07070 PF03796 DnaB-like helicase C terminal domain KU053_07070 PF00772 DnaB-like helicase N terminal domain KU053_07075 PF01281 Ribosomal protein L9, N-terminal domain KU053_07075 PF03948 Ribosomal protein L9, C-terminal domain KU053_07080 PF01084 Ribosomal protein S18 KU053_07085 PF01250 Ribosomal protein S6 KU053_07090 PF01040 UbiA prenyltransferase family KU053_07095 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KU053_07100 PF00510 Cytochrome c oxidase subunit III KU053_07105 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU053_07110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KU053_07110 PF06481 COX Aromatic Rich Motif KU053_07120 PF00391 PEP-utilising enzyme, mobile domain KU053_07120 PF02896 PEP-utilising enzyme, TIM barrel domain KU053_07120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KU053_07125 PF03618 Kinase/pyrophosphorylase KU053_07135 PF01522 Polysaccharide deacetylase KU053_07135 PF14883 Hypothetical glycosyl hydrolase family 13 KU053_07140 PF00535 Glycosyl transferase family 2 KU053_07145 PF13994 PgaD-like protein KU053_07155 PF00296 Luciferase-like monooxygenase KU053_07170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_07170 PF03466 LysR substrate binding domain KU053_07180 PF03462 PCRF domain KU053_07180 PF00472 RF-1 domain KU053_07185 PF13847 Methyltransferase domain KU053_07185 PF17827 PrmC N-terminal domain KU053_07190 PF00528 Binding-protein-dependent transport system inner membrane component KU053_07195 PF09084 NMT1/THI5 like KU053_07200 PF12833 Helix-turn-helix domain KU053_07205 PF00106 short chain dehydrogenase KU053_07210 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_07210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_07210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_07215 PF00501 AMP-binding enzyme KU053_07215 PF13193 AMP-binding enzyme C-terminal domain KU053_07220 PF01613 Flavin reductase like domain KU053_07225 PF00899 ThiF family KU053_07230 PF03109 ABC1 family KU053_07245 PF03814 Potassium-transporting ATPase A subunit KU053_07255 PF02669 K+-transporting ATPase, c chain KU053_07260 PF13493 Domain of unknown function (DUF4118) KU053_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_07260 PF00512 His Kinase A (phospho-acceptor) domain KU053_07260 PF02702 Osmosensitive K+ channel His kinase sensor domain KU053_07265 PF00486 Transcriptional regulatory protein, C terminal KU053_07265 PF00072 Response regulator receiver domain KU053_07270 PF00120 Glutamine synthetase, catalytic domain KU053_07280 PF03232 Ubiquinone biosynthesis protein COQ7 KU053_07285 PF07690 Major Facilitator Superfamily KU053_07290 PF07244 Surface antigen variable number repeat KU053_07290 PF17243 POTRA domain TamA domain 1 KU053_07290 PF01103 Surface antigen KU053_07305 PF00330 Aconitase family (aconitate hydratase) KU053_07305 PF06434 Aconitate hydratase 2 N-terminus KU053_07305 PF11791 Aconitate B N-terminal domain KU053_07315 PF00027 Cyclic nucleotide-binding domain KU053_07315 PF00520 Ion transport protein KU053_07320 PF07690 Major Facilitator Superfamily KU053_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_07335 PF03466 LysR substrate binding domain KU053_07340 PF04284 Protein of unknown function (DUF441) KU053_07350 PF01479 S4 domain KU053_07350 PF00849 RNA pseudouridylate synthase KU053_07365 PF01479 S4 domain KU053_07365 PF00849 RNA pseudouridylate synthase KU053_07370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KU053_07375 PF01119 DNA mismatch repair protein, C-terminal domain KU053_07375 PF08676 MutL C terminal dimerisation domain KU053_07385 PF17209 Hfq protein KU053_07395 PF00881 Nitroreductase family KU053_07405 PF00149 Calcineurin-like phosphoesterase KU053_07410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU053_07415 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KU053_07415 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU053_07420 PF02540 NAD synthase KU053_07420 PF00117 Glutamine amidotransferase class-I KU053_07420 PF00958 GMP synthase C terminal domain KU053_07425 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KU053_07430 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KU053_07435 PF13520 Amino acid permease KU053_07440 PF00171 Aldehyde dehydrogenase family KU053_07455 PF00465 Iron-containing alcohol dehydrogenase KU053_07460 PF05970 PIF1-like helicase KU053_07460 PF14493 Helix-turn-helix domain KU053_07470 PF06445 GyrI-like small molecule binding domain KU053_07475 PF02110 Hydroxyethylthiazole kinase family KU053_07490 PF11940 Domain of unknown function (DUF3458) Ig-like fold KU053_07490 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KU053_07490 PF01433 Peptidase family M1 domain KU053_07500 PF00106 short chain dehydrogenase KU053_07510 PF01817 Chorismate mutase type II KU053_07515 PF01037 Lrp/AsnC ligand binding domain KU053_07525 PF00440 Bacterial regulatory proteins, tetR family KU053_07530 PF07715 TonB-dependent Receptor Plug Domain KU053_07530 PF00593 TonB dependent receptor KU053_07535 PF00924 Mechanosensitive ion channel KU053_07570 PF07715 TonB-dependent Receptor Plug Domain KU053_07570 PF00593 TonB dependent receptor KU053_07590 PF12848 ABC transporter KU053_07590 PF00005 ABC transporter KU053_07595 PF00582 Universal stress protein family KU053_07620 PF00689 Cation transporting ATPase, C-terminus KU053_07620 PF00690 Cation transporter/ATPase, N-terminus KU053_07625 PF02308 MgtC family KU053_07630 PF03594 Benzoate membrane transport protein KU053_07635 PF01037 Lrp/AsnC ligand binding domain KU053_07640 PF01810 LysE type translocator KU053_07645 PF00923 Transaldolase/Fructose-6-phosphate aldolase KU053_07650 PF03466 LysR substrate binding domain KU053_07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_07660 PF00108 Thiolase, N-terminal domain KU053_07660 PF02803 Thiolase, C-terminal domain KU053_07670 PF01575 MaoC like domain KU053_07675 PF00144 Beta-lactamase KU053_07685 PF07690 Major Facilitator Superfamily KU053_07690 PF12170 DNA polymerase III tau subunit V interacting with alpha KU053_07690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KU053_07690 PF12169 DNA polymerase III subunits gamma and tau domain III KU053_07695 PF05506 Domain of unknown function (DUF756) KU053_07695 PF04185 Phosphoesterase family KU053_07700 PF03061 Thioesterase superfamily KU053_07705 PF00465 Iron-containing alcohol dehydrogenase KU053_07715 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU053_07720 PF01565 FAD binding domain KU053_07720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KU053_07735 PF01645 Conserved region in glutamate synthase KU053_07755 PF12832 MFS_1 like family KU053_07765 PF02785 Biotin carboxylase C-terminal domain KU053_07765 PF00289 Biotin carboxylase, N-terminal domain KU053_07765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_07770 PF00364 Biotin-requiring enzyme KU053_07775 PF01220 Dehydroquinase class II KU053_07780 PF11799 impB/mucB/samB family C-terminal domain KU053_07780 PF13438 Domain of unknown function (DUF4113) KU053_07780 PF00817 impB/mucB/samB family KU053_07790 PF00005 ABC transporter KU053_07795 PF00486 Transcriptional regulatory protein, C terminal KU053_07795 PF00072 Response regulator receiver domain KU053_07805 PF04324 BFD-like [2Fe-2S] binding domain KU053_07805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU053_07805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU053_07805 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU053_07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_07805 PF13806 Rieske-like [2Fe-2S] domain KU053_07810 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU053_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_07810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU053_07810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU053_07810 PF04324 BFD-like [2Fe-2S] binding domain KU053_07815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU053_07815 PF00384 Molybdopterin oxidoreductase KU053_07815 PF01568 Molydopterin dinucleotide binding domain KU053_07815 PF04324 BFD-like [2Fe-2S] binding domain KU053_07820 PF12804 MobA-like NTP transferase domain KU053_07825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU053_07825 PF00384 Molybdopterin oxidoreductase KU053_07825 PF01568 Molydopterin dinucleotide binding domain KU053_07830 PF06463 Molybdenum Cofactor Synthesis C KU053_07830 PF04055 Radical SAM superfamily KU053_07840 PF02391 MoaE protein KU053_07845 PF00994 Probable molybdopterin binding domain KU053_07845 PF01967 MoaC family KU053_07850 PF03453 MoeA N-terminal region (domain I and II) KU053_07850 PF03454 MoeA C-terminal region (domain IV) KU053_07850 PF00994 Probable molybdopterin binding domain KU053_07855 PF01638 HxlR-like helix-turn-helix KU053_07860 PF00392 Bacterial regulatory proteins, gntR family KU053_07860 PF00155 Aminotransferase class I and II KU053_07865 PF00892 EamA-like transporter family KU053_07885 PF02635 DsrE/DsrF-like family KU053_07890 PF16363 GDP-mannose 4,6 dehydratase KU053_07895 PF10415 Fumarase C C-terminus KU053_07895 PF00206 Lyase KU053_07915 PF01266 FAD dependent oxidoreductase KU053_07925 PF02542 YgbB family KU053_07935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU053_07935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU053_07940 PF00440 Bacterial regulatory proteins, tetR family KU053_07945 PF00158 Sigma-54 interaction domain KU053_07945 PF00072 Response regulator receiver domain KU053_07945 PF02954 Bacterial regulatory protein, Fis family KU053_07950 PF00512 His Kinase A (phospho-acceptor) domain KU053_07950 PF00989 PAS fold KU053_07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_07955 PF04055 Radical SAM superfamily KU053_07955 PF00919 Uncharacterized protein family UPF0004 KU053_07955 PF18693 TRAM domain KU053_07960 PF00696 Amino acid kinase family KU053_07965 PF01765 Ribosome recycling factor KU053_07970 PF01255 Putative undecaprenyl diphosphate synthase KU053_07980 PF13288 DXP reductoisomerase C-terminal domain KU053_07980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KU053_07980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KU053_07985 PF17820 PDZ domain KU053_07985 PF13180 PDZ domain KU053_07985 PF02163 Peptidase family M50 KU053_07990 PF01103 Surface antigen KU053_07990 PF07244 Surface antigen variable number repeat KU053_08000 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_08000 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KU053_08005 PF07977 FabA-like domain KU053_08010 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_08010 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KU053_08025 PF02631 RecX family KU053_08030 PF00154 recA bacterial DNA recombination protein KU053_08035 PF01479 S4 domain KU053_08040 PF13419 Haloacid dehalogenase-like hydrolase KU053_08065 PF01037 Lrp/AsnC ligand binding domain KU053_08070 PF00266 Aminotransferase class-V KU053_08075 PF00324 Amino acid permease KU053_08085 PF05922 Peptidase inhibitor I9 KU053_08085 PF00082 Subtilase family KU053_08090 PF01740 STAS domain KU053_08090 PF00916 Sulfate permease family KU053_08095 PF02586 SOS response associated peptidase (SRAP) KU053_08100 PF07995 Glucose / Sorbosone dehydrogenase KU053_08110 PF00563 EAL domain KU053_08110 PF00990 Diguanylate cyclase, GGDEF domain KU053_08110 PF03707 Bacterial signalling protein N terminal repeat KU053_08130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KU053_08130 PF02378 Phosphotransferase system, EIIC KU053_08135 PF00294 pfkB family carbohydrate kinase KU053_08140 PF00391 PEP-utilising enzyme, mobile domain KU053_08140 PF05524 PEP-utilising enzyme, N-terminal KU053_08140 PF02896 PEP-utilising enzyme, TIM barrel domain KU053_08140 PF00381 PTS HPr component phosphorylation site KU053_08140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KU053_08165 PF05525 Branched-chain amino acid transport protein KU053_08170 PF00557 Metallopeptidase family M24 KU053_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_08175 PF03466 LysR substrate binding domain KU053_08185 PF00462 Glutaredoxin KU053_08190 PF00202 Aminotransferase class-III KU053_08195 PF00571 CBS domain KU053_08195 PF00478 IMP dehydrogenase / GMP reductase domain KU053_08220 PF02881 SRP54-type protein, helical bundle domain KU053_08220 PF00448 SRP54-type protein, GTPase domain KU053_08230 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KU053_08245 PF08173 Membrane bound YbgT-like protein KU053_08250 PF02322 Cytochrome bd terminal oxidase subunit II KU053_08255 PF01654 Cytochrome bd terminal oxidase subunit I KU053_08265 PF07290 Protein of unknown function (DUF1449) KU053_08275 PF00294 pfkB family carbohydrate kinase KU053_08280 PF00593 TonB dependent receptor KU053_08280 PF07715 TonB-dependent Receptor Plug Domain KU053_08285 PF05193 Peptidase M16 inactive domain KU053_08285 PF08367 Peptidase M16C associated KU053_08285 PF00675 Insulinase (Peptidase family M16) KU053_08290 PF02253 Phospholipase A1 KU053_08295 PF02386 Cation transport protein KU053_08300 PF02254 TrkA-N domain KU053_08300 PF02080 TrkA-C domain KU053_08305 PF00585 C-terminal regulatory domain of Threonine dehydratase KU053_08305 PF00291 Pyridoxal-phosphate dependent enzyme KU053_08310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KU053_08325 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU053_08325 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU053_08335 PF02617 ATP-dependent Clp protease adaptor protein ClpS KU053_08340 PF00004 ATPase family associated with various cellular activities (AAA) KU053_08340 PF07724 AAA domain (Cdc48 subfamily) KU053_08340 PF17871 AAA lid domain KU053_08340 PF02861 Clp amino terminal domain, pathogenicity island component KU053_08340 PF10431 C-terminal, D2-small domain, of ClpB protein KU053_08345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KU053_08350 PF00793 DAHP synthetase I family KU053_08365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_08365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_08395 PF00117 Glutamine amidotransferase class-I KU053_08395 PF06418 CTP synthase N-terminus KU053_08400 PF00793 DAHP synthetase I family KU053_08405 PF00113 Enolase, C-terminal TIM barrel domain KU053_08405 PF03952 Enolase, N-terminal domain KU053_08410 PF04239 Protein of unknown function (DUF421) KU053_08415 PF04977 Septum formation initiator KU053_08420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KU053_08425 PF01144 Coenzyme A transferase KU053_08430 PF01144 Coenzyme A transferase KU053_08435 PF02803 Thiolase, C-terminal domain KU053_08435 PF00108 Thiolase, N-terminal domain KU053_08440 PF00206 Lyase KU053_08440 PF10397 Adenylosuccinate lyase C-terminus KU053_08445 PF00561 alpha/beta hydrolase fold KU053_08450 PF07690 Major Facilitator Superfamily KU053_08455 PF02627 Carboxymuconolactone decarboxylase family KU053_08460 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KU053_08460 PF00775 Dioxygenase KU053_08465 PF00775 Dioxygenase KU053_08470 PF01487 Type I 3-dehydroquinase KU053_08475 PF05048 Periplasmic copper-binding protein (NosD) KU053_08480 PF04966 Carbohydrate-selective porin, OprB family KU053_08485 PF13360 PQQ-like domain KU053_08485 PF01011 PQQ enzyme repeat KU053_08495 PF04143 Sulphur transport KU053_08505 PF00753 Metallo-beta-lactamase superfamily KU053_08510 PF01614 Bacterial transcriptional regulator KU053_08510 PF09339 IclR helix-turn-helix domain KU053_08515 PF03466 LysR substrate binding domain KU053_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_08520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_08520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_08520 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_08535 PF00106 short chain dehydrogenase KU053_08545 PF07690 Major Facilitator Superfamily KU053_08555 PF01425 Amidase KU053_08560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU053_08575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU053_08575 PF00355 Rieske [2Fe-2S] domain KU053_08590 PF00175 Oxidoreductase NAD-binding domain KU053_08590 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_08595 PF01613 Flavin reductase like domain KU053_08600 PF02311 AraC-like ligand binding domain KU053_08600 PF12833 Helix-turn-helix domain KU053_08605 PF01179 Copper amine oxidase, enzyme domain KU053_08605 PF02727 Copper amine oxidase, N2 domain KU053_08605 PF02728 Copper amine oxidase, N3 domain KU053_08605 PF07833 Copper amine oxidase N-terminal domain KU053_08615 PF00171 Aldehyde dehydrogenase family KU053_08620 PF01804 Penicillin amidase KU053_08625 PF12146 Serine aminopeptidase, S33 KU053_08630 PF00108 Thiolase, N-terminal domain KU053_08630 PF02803 Thiolase, C-terminal domain KU053_08635 PF01144 Coenzyme A transferase KU053_08640 PF01144 Coenzyme A transferase KU053_08645 PF00775 Dioxygenase KU053_08645 PF04444 Catechol dioxygenase N terminus KU053_08650 PF02426 Muconolactone delta-isomerase KU053_08655 PF13378 Enolase C-terminal domain-like KU053_08655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU053_08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_08660 PF03466 LysR substrate binding domain KU053_08670 PF07729 FCD domain KU053_08670 PF00392 Bacterial regulatory proteins, gntR family KU053_08675 PF00920 Dehydratase family KU053_08680 PF07690 Major Facilitator Superfamily KU053_08690 PF00171 Aldehyde dehydrogenase family KU053_08710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_08710 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_08710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_08720 PF02954 Bacterial regulatory protein, Fis family KU053_08720 PF06506 Propionate catabolism activator KU053_08720 PF00158 Sigma-54 interaction domain KU053_08725 PF00501 AMP-binding enzyme KU053_08725 PF13193 AMP-binding enzyme C-terminal domain KU053_08730 PF04341 Protein of unknown function, DUF485 KU053_08735 PF00474 Sodium:solute symporter family KU053_08740 PF00107 Zinc-binding dehydrogenase KU053_08740 PF08240 Alcohol dehydrogenase GroES-like domain KU053_08745 PF00171 Aldehyde dehydrogenase family KU053_08755 PF00561 alpha/beta hydrolase fold KU053_08760 PF00199 Catalase KU053_08760 PF06628 Catalase-related immune-responsive KU053_08775 PF07859 alpha/beta hydrolase fold KU053_08780 PF01047 MarR family KU053_08785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_08790 PF00106 short chain dehydrogenase KU053_08795 PF01872 RibD C-terminal domain KU053_08800 PF00376 MerR family regulatory protein KU053_08800 PF09278 MerR, DNA binding KU053_08810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_08820 PF12706 Beta-lactamase superfamily domain KU053_08825 PF08359 YsiA-like protein, C-terminal region KU053_08825 PF00440 Bacterial regulatory proteins, tetR family KU053_08835 PF00857 Isochorismatase family KU053_08840 PF03466 LysR substrate binding domain KU053_08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_08845 PF07995 Glucose / Sorbosone dehydrogenase KU053_08850 PF00999 Sodium/hydrogen exchanger family KU053_08850 PF02254 TrkA-N domain KU053_08860 PF01546 Peptidase family M20/M25/M40 KU053_08860 PF07687 Peptidase dimerisation domain KU053_08870 PF17287 POTRA domain KU053_08870 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KU053_08870 PF08479 POTRA domain, ShlB-type KU053_08875 PF05860 haemagglutination activity domain KU053_08875 PF13332 Hemagglutinin repeat KU053_08875 PF13018 Extended Signal Peptide of Type V secretion system KU053_08875 PF04829 Pre-toxin domain with VENN motif KU053_08890 PF07690 Major Facilitator Superfamily KU053_08895 PF04909 Amidohydrolase KU053_08905 PF00392 Bacterial regulatory proteins, gntR family KU053_08905 PF07702 UTRA domain KU053_08910 PF08450 SMP-30/Gluconolactonase/LRE-like region KU053_08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_08920 PF03466 LysR substrate binding domain KU053_08940 PF07690 Major Facilitator Superfamily KU053_08945 PF01842 ACT domain KU053_08945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU053_08945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU053_08950 PF03737 Aldolase/RraA KU053_08970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_08970 PF00529 HlyD membrane-fusion protein of T1SS KU053_08985 PF00171 Aldehyde dehydrogenase family KU053_08990 PF00920 Dehydratase family KU053_09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_09000 PF03466 LysR substrate binding domain KU053_09005 PF01370 NAD dependent epimerase/dehydratase family KU053_09010 PF07690 Major Facilitator Superfamily KU053_09015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU053_09015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU053_09020 PF06719 AraC-type transcriptional regulator N-terminus KU053_09020 PF12833 Helix-turn-helix domain KU053_09035 PF08240 Alcohol dehydrogenase GroES-like domain KU053_09035 PF00107 Zinc-binding dehydrogenase KU053_09045 PF01032 FecCD transport family KU053_09050 PF00005 ABC transporter KU053_09070 PF14572 Phosphoribosyl synthetase-associated domain KU053_09070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU053_09075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU053_09145 PF00196 Bacterial regulatory proteins, luxR family KU053_09150 PF01425 Amidase KU053_09155 PF13533 Biotin-lipoyl like KU053_09160 PF07690 Major Facilitator Superfamily KU053_09185 PF01975 Survival protein SurE KU053_09195 PF13291 ACT domain KU053_09195 PF02824 TGS domain KU053_09195 PF04607 Region found in RelA / SpoT proteins KU053_09245 PF12146 Serine aminopeptidase, S33 KU053_09250 PF02311 AraC-like ligand binding domain KU053_09250 PF12833 Helix-turn-helix domain KU053_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_09260 PF00512 His Kinase A (phospho-acceptor) domain KU053_09260 PF00672 HAMP domain KU053_09260 PF16527 Two-component sensor protein CpxA, periplasmic domain KU053_09265 PF00486 Transcriptional regulatory protein, C terminal KU053_09265 PF00072 Response regulator receiver domain KU053_09270 PF00529 HlyD membrane-fusion protein of T1SS KU053_09270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_09275 PF00873 AcrB/AcrD/AcrF family KU053_09280 PF02321 Outer membrane efflux protein KU053_09285 PF12146 Serine aminopeptidase, S33 KU053_09290 PF00743 Flavin-binding monooxygenase-like KU053_09295 PF01593 Flavin containing amine oxidoreductase KU053_09310 PF01266 FAD dependent oxidoreductase KU053_09330 PF16970 Type-1 fimbrial protein, A KU053_09340 PF02753 Pili assembly chaperone PapD, C-terminal domain KU053_09340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU053_09345 PF13953 PapC C-terminal domain KU053_09345 PF13954 PapC N-terminal domain KU053_09345 PF00577 Outer membrane usher protein KU053_09350 PF00419 Fimbrial protein KU053_09360 PF08240 Alcohol dehydrogenase GroES-like domain KU053_09360 PF00107 Zinc-binding dehydrogenase KU053_09370 PF00199 Catalase KU053_09385 PF13091 PLD-like domain KU053_09400 PF01244 Membrane dipeptidase (Peptidase family M19) KU053_09405 PF04055 Radical SAM superfamily KU053_09405 PF13186 Iron-sulfur cluster-binding domain KU053_09410 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KU053_09415 PF03070 TENA/THI-4/PQQC family KU053_09420 PF12706 Beta-lactamase superfamily domain KU053_09425 PF08042 PqqA family KU053_09430 PF02503 Polyphosphate kinase middle domain KU053_09430 PF13090 Polyphosphate kinase C-terminal domain 2 KU053_09430 PF17941 Polyphosphate kinase C-terminal domain 1 KU053_09430 PF13089 Polyphosphate kinase N-terminal domain KU053_09435 PF00149 Calcineurin-like phosphoesterase KU053_09445 PF00550 Phosphopantetheine attachment site KU053_09445 PF00857 Isochorismatase family KU053_09450 PF00106 short chain dehydrogenase KU053_09455 PF03459 TOBE domain KU053_09455 PF00005 ABC transporter KU053_09460 PF00528 Binding-protein-dependent transport system inner membrane component KU053_09470 PF03459 TOBE domain KU053_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_09475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU053_09475 PF00355 Rieske [2Fe-2S] domain KU053_09480 PF00866 Ring hydroxylating beta subunit KU053_09485 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_09485 PF00175 Oxidoreductase NAD-binding domain KU053_09485 PF00970 Oxidoreductase FAD-binding domain KU053_09490 PF14525 AraC-binding-like domain KU053_09490 PF12833 Helix-turn-helix domain KU053_09500 PF01613 Flavin reductase like domain KU053_09515 PF01738 Dienelactone hydrolase family KU053_09520 PF07690 Major Facilitator Superfamily KU053_09525 PF12833 Helix-turn-helix domain KU053_09525 PF06719 AraC-type transcriptional regulator N-terminus KU053_09550 PF03466 LysR substrate binding domain KU053_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_09555 PF01144 Coenzyme A transferase KU053_09560 PF01144 Coenzyme A transferase KU053_09565 PF02667 Short chain fatty acid transporter KU053_09570 PF00108 Thiolase, N-terminal domain KU053_09570 PF02803 Thiolase, C-terminal domain KU053_09575 PF03466 LysR substrate binding domain KU053_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_09580 PF03466 LysR substrate binding domain KU053_09595 PF00206 Lyase KU053_09595 PF10415 Fumarase C C-terminus KU053_09600 PF07715 TonB-dependent Receptor Plug Domain KU053_09600 PF00593 TonB dependent receptor KU053_09605 PF00083 Sugar (and other) transporter KU053_09620 PF00005 ABC transporter KU053_09625 PF00528 Binding-protein-dependent transport system inner membrane component KU053_09630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU053_09645 PF07702 UTRA domain KU053_09645 PF00392 Bacterial regulatory proteins, gntR family KU053_09655 PF02525 Flavodoxin-like fold KU053_09660 PF01638 HxlR-like helix-turn-helix KU053_09665 PF12833 Helix-turn-helix domain KU053_09665 PF06445 GyrI-like small molecule binding domain KU053_09680 PF01925 Sulfite exporter TauE/SafE KU053_09685 PF04273 Putative phosphatase (DUF442) KU053_09685 PF00753 Metallo-beta-lactamase superfamily KU053_09690 PF04273 Putative phosphatase (DUF442) KU053_09690 PF00753 Metallo-beta-lactamase superfamily KU053_09695 PF02954 Bacterial regulatory protein, Fis family KU053_09695 PF00072 Response regulator receiver domain KU053_09695 PF00158 Sigma-54 interaction domain KU053_09700 PF01062 Bestrophin, RFP-TM, chloride channel KU053_09705 PF08240 Alcohol dehydrogenase GroES-like domain KU053_09705 PF00107 Zinc-binding dehydrogenase KU053_09710 PF00106 short chain dehydrogenase KU053_09715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_09715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU053_09720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU053_09720 PF00364 Biotin-requiring enzyme KU053_09720 PF02817 e3 binding domain KU053_09725 PF02779 Transketolase, pyrimidine binding domain KU053_09725 PF02780 Transketolase, C-terminal domain KU053_09730 PF00676 Dehydrogenase E1 component KU053_09735 PF04055 Radical SAM superfamily KU053_09750 PF08448 PAS fold KU053_09750 PF00990 Diguanylate cyclase, GGDEF domain KU053_09755 PF01264 Chorismate synthase KU053_09760 PF05175 Methyltransferase small domain KU053_09765 PF00291 Pyridoxal-phosphate dependent enzyme KU053_09775 PF01434 Peptidase family M41 KU053_09775 PF00004 ATPase family associated with various cellular activities (AAA) KU053_09775 PF17862 AAA+ lid domain KU053_09785 PF05166 YcgL domain KU053_09805 PF00570 HRDC domain KU053_09805 PF01612 3'-5' exonuclease KU053_09810 PF02132 RecR protein KU053_09810 PF13662 Toprim domain KU053_09815 PF02575 YbaB/EbfC DNA-binding family KU053_09825 PF01053 Cys/Met metabolism PLP-dependent enzyme KU053_09830 PF00561 alpha/beta hydrolase fold KU053_09835 PF08241 Methyltransferase domain KU053_09865 PF01230 HIT domain KU053_09900 PF00005 ABC transporter KU053_09905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_09915 PF02684 Lipid-A-disaccharide synthetase KU053_09920 PF00593 TonB dependent receptor KU053_09920 PF07715 TonB-dependent Receptor Plug Domain KU053_09940 PF01925 Sulfite exporter TauE/SafE KU053_09945 PF00793 DAHP synthetase I family KU053_09950 PF02654 Cobalamin-5-phosphate synthase KU053_09965 PF02277 Phosphoribosyltransferase KU053_09970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KU053_09980 PF13419 Haloacid dehalogenase-like hydrolase KU053_10005 PF07715 TonB-dependent Receptor Plug Domain KU053_10005 PF00593 TonB dependent receptor KU053_10020 PF06276 Ferric iron reductase FhuF-like transporter KU053_10020 PF04183 IucA / IucC family KU053_10025 PF06276 Ferric iron reductase FhuF-like transporter KU053_10025 PF04183 IucA / IucC family KU053_10030 PF07690 Major Facilitator Superfamily KU053_10035 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU053_10040 PF06276 Ferric iron reductase FhuF-like transporter KU053_10040 PF04183 IucA / IucC family KU053_10045 PF04073 Aminoacyl-tRNA editing domain KU053_10055 PF03109 ABC1 family KU053_10060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_10060 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_10060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_10065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_10065 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_10065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_10070 PF00487 Fatty acid desaturase KU053_10075 PF12833 Helix-turn-helix domain KU053_10075 PF12852 Cupin KU053_10080 PF09312 SurA N-terminal domain KU053_10080 PF00639 PPIC-type PPIASE domain KU053_10085 PF00216 Bacterial DNA-binding protein KU053_10100 PF02082 Transcriptional regulator KU053_10105 PF00266 Aminotransferase class-V KU053_10110 PF01592 NifU-like N terminal domain KU053_10115 PF01521 Iron-sulphur cluster biosynthesis KU053_10120 PF07743 HSCB C-terminal oligomerisation domain KU053_10120 PF00226 DnaJ domain KU053_10125 PF00012 Hsp70 protein KU053_10130 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_10135 PF00211 Adenylate and Guanylate cyclase catalytic domain KU053_10145 PF02559 CarD-like/TRCF domain KU053_10145 PF17757 UvrB interaction domain KU053_10145 PF03461 TRCF domain KU053_10145 PF00271 Helicase conserved C-terminal domain KU053_10145 PF00270 DEAD/DEAH box helicase KU053_10165 PF03737 Aldolase/RraA KU053_10170 PF13460 NAD(P)H-binding KU053_10175 PF01649 Ribosomal protein S20 KU053_10185 PF00459 Inositol monophosphatase family KU053_10200 PF00005 ABC transporter KU053_10200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU053_10205 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10210 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10215 PF01432 Peptidase family M3 KU053_10235 PF07715 TonB-dependent Receptor Plug Domain KU053_10235 PF00593 TonB dependent receptor KU053_10245 PF01618 MotA/TolQ/ExbB proton channel family KU053_10250 PF02472 Biopolymer transport protein ExbD/TolR KU053_10255 PF02472 Biopolymer transport protein ExbD/TolR KU053_10265 PF01274 Malate synthase KU053_10270 PF03969 AFG1-like ATPase KU053_10280 PF00743 Flavin-binding monooxygenase-like KU053_10290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KU053_10300 PF00216 Bacterial DNA-binding protein KU053_10305 PF00575 S1 RNA binding domain KU053_10310 PF02224 Cytidylate kinase KU053_10320 PF14437 MafB19-like deaminase KU053_10330 PF03167 Uracil DNA glycosylase superfamily KU053_10340 PF03934 Type II secretion system (T2SS), protein K KU053_10345 PF07963 Prokaryotic N-terminal methylation motif KU053_10345 PF11612 Type II secretion system (T2SS), protein J KU053_10350 PF02501 Type II secretion system (T2SS), protein I KU053_10350 PF07963 Prokaryotic N-terminal methylation motif KU053_10365 PF01026 TatD related DNase KU053_10375 PF09115 DNA polymerase III, delta subunit, C terminal KU053_10380 PF02348 Cytidylyltransferase KU053_10385 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KU053_10390 PF00664 ABC transporter transmembrane region KU053_10390 PF00005 ABC transporter KU053_10400 PF01618 MotA/TolQ/ExbB proton channel family KU053_10405 PF02195 ParB-like nuclease domain KU053_10405 PF17762 HTH domain found in ParB protein KU053_10410 PF13614 AAA domain KU053_10415 PF02527 rRNA small subunit methyltransferase G KU053_10420 PF00483 Nucleotidyl transferase KU053_10425 PF01636 Phosphotransferase enzyme family KU053_10430 PF04453 LPS transport system D KU053_10430 PF03968 OstA-like protein KU053_10435 PF00639 PPIC-type PPIASE domain KU053_10435 PF09312 SurA N-terminal domain KU053_10440 PF01116 Fructose-bisphosphate aldolase class-II KU053_10450 PF00162 Phosphoglycerate kinase KU053_10460 PF02545 Maf-like protein KU053_10465 PF08007 Cupin superfamily protein KU053_10480 PF00375 Sodium:dicarboxylate symporter family KU053_10485 PF06912 Protein of unknown function (DUF1275) KU053_10490 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KU053_10495 PF00005 ABC transporter KU053_10495 PF00664 ABC transporter transmembrane region KU053_10505 PF12833 Helix-turn-helix domain KU053_10505 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU053_10510 PF01597 Glycine cleavage H-protein KU053_10515 PF02146 Sir2 family KU053_10520 PF00474 Sodium:solute symporter family KU053_10525 PF01037 Lrp/AsnC ligand binding domain KU053_10530 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KU053_10530 PF14850 DNA-binding domain of Proline dehydrogenase KU053_10530 PF01619 Proline dehydrogenase KU053_10530 PF00171 Aldehyde dehydrogenase family KU053_10535 PF04229 GrpB protein KU053_10540 PF05958 tRNA (Uracil-5-)-methyltransferase KU053_10550 PF09992 Phosphodiester glycosidase KU053_10560 PF04264 YceI-like domain KU053_10575 PF02779 Transketolase, pyrimidine binding domain KU053_10575 PF02780 Transketolase, C-terminal domain KU053_10575 PF00456 Transketolase, thiamine diphosphate binding domain KU053_10580 PF02772 S-adenosylmethionine synthetase, central domain KU053_10580 PF00438 S-adenosylmethionine synthetase, N-terminal domain KU053_10580 PF02773 S-adenosylmethionine synthetase, C-terminal domain KU053_10600 PF00905 Penicillin binding protein transpeptidase domain KU053_10615 PF02075 Crossover junction endodeoxyribonuclease RuvC KU053_10620 PF01256 Carbohydrate kinase KU053_10620 PF03853 YjeF-related protein N-terminus KU053_10625 PF08331 Domain of unknown function (DUF1730) KU053_10630 PF06968 Biotin and Thiamin Synthesis associated domain KU053_10630 PF04055 Radical SAM superfamily KU053_10645 PF16970 Type-1 fimbrial protein, A KU053_10650 PF02753 Pili assembly chaperone PapD, C-terminal domain KU053_10650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU053_10655 PF13954 PapC N-terminal domain KU053_10655 PF00577 Outer membrane usher protein KU053_10655 PF13953 PapC C-terminal domain KU053_10675 PF00892 EamA-like transporter family KU053_10685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU053_10695 PF03466 LysR substrate binding domain KU053_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_10715 PF00440 Bacterial regulatory proteins, tetR family KU053_10725 PF01709 Transcriptional regulator KU053_10730 PF01037 Lrp/AsnC ligand binding domain KU053_10740 PF00005 ABC transporter KU053_10745 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10750 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_10765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU053_10775 PF00296 Luciferase-like monooxygenase KU053_10780 PF03180 NLPA lipoprotein KU053_10785 PF03180 NLPA lipoprotein KU053_10790 PF09383 NIL domain KU053_10790 PF00005 ABC transporter KU053_10795 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10800 PF01926 50S ribosome-binding GTPase KU053_10800 PF06071 Protein of unknown function (DUF933) KU053_10825 PF03591 AzlC protein KU053_10830 PF05437 Branched-chain amino acid transport protein (AzlD) KU053_10840 PF02222 ATP-grasp domain KU053_10845 PF01909 Nucleotidyltransferase domain KU053_10845 PF01966 HD domain KU053_10845 PF08335 GlnD PII-uridylyltransferase KU053_10850 PF00155 Aminotransferase class I and II KU053_10860 PF12852 Cupin KU053_10860 PF12833 Helix-turn-helix domain KU053_10865 PF00255 Glutathione peroxidase KU053_10870 PF01641 SelR domain KU053_10875 PF00155 Aminotransferase class I and II KU053_10880 PF00375 Sodium:dicarboxylate symporter family KU053_10885 PF00710 Asparaginase, N-terminal KU053_10885 PF17763 Glutaminase/Asparaginase C-terminal domain KU053_10890 PF02811 PHP domain KU053_10890 PF01336 OB-fold nucleic acid binding domain KU053_10890 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU053_10890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU053_10890 PF14579 Helix-hairpin-helix motif KU053_10895 PF00588 SpoU rRNA Methylase family KU053_10900 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_10915 PF13192 Thioredoxin domain KU053_10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_10930 PF03466 LysR substrate binding domain KU053_10935 PF01758 Sodium Bile acid symporter family KU053_10940 PF01022 Bacterial regulatory protein, arsR family KU053_10945 PF03960 ArsC family KU053_10955 PF01979 Amidohydrolase family KU053_10955 PF13382 Adenine deaminase C-terminal domain KU053_10965 PF03466 LysR substrate binding domain KU053_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_10975 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU053_10980 PF01177 Asp/Glu/Hydantoin racemase KU053_10985 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KU053_10990 PF00528 Binding-protein-dependent transport system inner membrane component KU053_10995 PF00005 ABC transporter KU053_11000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU053_11010 PF00083 Sugar (and other) transporter KU053_11015 PF00296 Luciferase-like monooxygenase KU053_11020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU053_11020 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_11020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_11030 PF01654 Cytochrome bd terminal oxidase subunit I KU053_11035 PF02322 Cytochrome bd terminal oxidase subunit II KU053_11045 PF00392 Bacterial regulatory proteins, gntR family KU053_11045 PF00155 Aminotransferase class I and II KU053_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11050 PF03466 LysR substrate binding domain KU053_11065 PF00698 Acyl transferase domain KU053_11070 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KU053_11080 PF01039 Carboxyl transferase domain KU053_11085 PF06857 Malonate decarboxylase delta subunit (MdcD) KU053_11090 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KU053_11095 PF16957 Malonate decarboxylase, alpha subunit, transporter KU053_11100 PF07690 Major Facilitator Superfamily KU053_11115 PF00155 Aminotransferase class I and II KU053_11115 PF00392 Bacterial regulatory proteins, gntR family KU053_11120 PF04172 LrgB-like family KU053_11125 PF03788 LrgA family KU053_11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11130 PF03466 LysR substrate binding domain KU053_11135 PF14834 Glutathione S-transferase, C-terminal domain KU053_11135 PF02798 Glutathione S-transferase, N-terminal domain KU053_11140 PF02798 Glutathione S-transferase, N-terminal domain KU053_11145 PF03466 LysR substrate binding domain KU053_11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11155 PF00581 Rhodanese-like domain KU053_11160 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_11170 PF00266 Aminotransferase class-V KU053_11180 PF01810 LysE type translocator KU053_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11185 PF03466 LysR substrate binding domain KU053_11195 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU053_11200 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU053_11205 PF00005 ABC transporter KU053_11210 PF00528 Binding-protein-dependent transport system inner membrane component KU053_11215 PF00528 Binding-protein-dependent transport system inner membrane component KU053_11230 PF00072 Response regulator receiver domain KU053_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_11235 PF00072 Response regulator receiver domain KU053_11235 PF09308 LuxQ, periplasmic KU053_11235 PF00512 His Kinase A (phospho-acceptor) domain KU053_11245 PF13404 AsnC-type helix-turn-helix domain KU053_11245 PF01037 Lrp/AsnC ligand binding domain KU053_11255 PF00717 Peptidase S24-like KU053_11280 PF00199 Catalase KU053_11280 PF06628 Catalase-related immune-responsive KU053_11280 PF18011 C-terminal domain found in long catalases KU053_11290 PF00994 Probable molybdopterin binding domain KU053_11290 PF02464 Competence-damaged protein KU053_11290 PF18146 Damage-inducible protein CinA KH domain KU053_11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11325 PF03466 LysR substrate binding domain KU053_11345 PF13193 AMP-binding enzyme C-terminal domain KU053_11345 PF00501 AMP-binding enzyme KU053_11350 PF00440 Bacterial regulatory proteins, tetR family KU053_11355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_11355 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_11355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_11360 PF01039 Carboxyl transferase domain KU053_11365 PF00378 Enoyl-CoA hydratase/isomerase KU053_11370 PF00289 Biotin carboxylase, N-terminal domain KU053_11370 PF02785 Biotin carboxylase C-terminal domain KU053_11370 PF00364 Biotin-requiring enzyme KU053_11370 PF18140 Propionyl-coenzyme A carboxylase BT domain KU053_11370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_11375 PF00682 HMGL-like KU053_11380 PF03466 LysR substrate binding domain KU053_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_11395 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_11395 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU053_11395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_11405 PF07690 Major Facilitator Superfamily KU053_11415 PF01144 Coenzyme A transferase KU053_11420 PF01144 Coenzyme A transferase KU053_11425 PF07690 Major Facilitator Superfamily KU053_11430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_11430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_11430 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_11435 PF00378 Enoyl-CoA hydratase/isomerase KU053_11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU053_11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU053_11445 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU053_11450 PF02803 Thiolase, C-terminal domain KU053_11450 PF00108 Thiolase, N-terminal domain KU053_11455 PF09339 IclR helix-turn-helix domain KU053_11460 PF07690 Major Facilitator Superfamily KU053_11465 PF03060 Nitronate monooxygenase KU053_11470 PF00378 Enoyl-CoA hydratase/isomerase KU053_11475 PF09339 IclR helix-turn-helix domain KU053_11480 PF02515 CoA-transferase family III KU053_11485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_11485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_11485 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_11490 PF07690 Major Facilitator Superfamily KU053_11495 PF13419 Haloacid dehalogenase-like hydrolase KU053_11500 PF00266 Aminotransferase class-V KU053_11505 PF01266 FAD dependent oxidoreductase KU053_11510 PF00528 Binding-protein-dependent transport system inner membrane component KU053_11515 PF00005 ABC transporter KU053_11515 PF08402 TOBE domain KU053_11525 PF00392 Bacterial regulatory proteins, gntR family KU053_11525 PF07702 UTRA domain KU053_11530 PF01494 FAD binding domain KU053_11535 PF01614 Bacterial transcriptional regulator KU053_11535 PF09339 IclR helix-turn-helix domain KU053_11540 PF02525 Flavodoxin-like fold KU053_11545 PF03466 LysR substrate binding domain KU053_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11550 PF02627 Carboxymuconolactone decarboxylase family KU053_11555 PF00171 Aldehyde dehydrogenase family KU053_11565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU053_11575 PF00171 Aldehyde dehydrogenase family KU053_11580 PF00296 Luciferase-like monooxygenase KU053_11585 PF01613 Flavin reductase like domain KU053_11590 PF12697 Alpha/beta hydrolase family KU053_11610 PF01292 Prokaryotic cytochrome b561 KU053_11615 PF00199 Catalase KU053_11650 PF03061 Thioesterase superfamily KU053_11655 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_11660 PF07848 PaaX-like protein KU053_11660 PF08223 PaaX-like protein C-terminal domain KU053_11665 PF00501 AMP-binding enzyme KU053_11665 PF14535 AMP-binding enzyme C-terminal domain KU053_11670 PF02803 Thiolase, C-terminal domain KU053_11670 PF00108 Thiolase, N-terminal domain KU053_11675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU053_11675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU053_11675 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU053_11680 PF00378 Enoyl-CoA hydratase/isomerase KU053_11685 PF00378 Enoyl-CoA hydratase/isomerase KU053_11690 PF00970 Oxidoreductase FAD-binding domain KU053_11690 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_11690 PF00175 Oxidoreductase NAD-binding domain KU053_11695 PF01883 Iron-sulfur cluster assembly protein KU053_11700 PF05138 Phenylacetic acid catabolic protein KU053_11705 PF06243 Phenylacetic acid degradation B KU053_11710 PF05138 Phenylacetic acid catabolic protein KU053_11715 PF00171 Aldehyde dehydrogenase family KU053_11715 PF01575 MaoC like domain KU053_11720 PF03313 Serine dehydratase alpha chain KU053_11720 PF03315 Serine dehydratase beta chain KU053_11725 PF13520 Amino acid permease KU053_11730 PF00171 Aldehyde dehydrogenase family KU053_11735 PF00083 Sugar (and other) transporter KU053_11745 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_11745 PF04324 BFD-like [2Fe-2S] binding domain KU053_11755 PF01266 FAD dependent oxidoreductase KU053_11760 PF05544 Proline racemase KU053_11765 PF00392 Bacterial regulatory proteins, gntR family KU053_11775 PF00701 Dihydrodipicolinate synthetase family KU053_11785 PF00376 MerR family regulatory protein KU053_11785 PF09278 MerR, DNA binding KU053_11800 PF02677 Epoxyqueuosine reductase QueH KU053_11815 PF07690 Major Facilitator Superfamily KU053_11820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU053_11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_11830 PF03466 LysR substrate binding domain KU053_11850 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KU053_11855 PF06812 ImpA, N-terminal, type VI secretion system KU053_11860 PF00004 ATPase family associated with various cellular activities (AAA) KU053_11860 PF07724 AAA domain (Cdc48 subfamily) KU053_11860 PF17871 AAA lid domain KU053_11860 PF10431 C-terminal, D2-small domain, of ClpB protein KU053_11870 PF01389 OmpA-like transmembrane domain KU053_11870 PF00691 OmpA family KU053_11880 PF06761 Intracellular multiplication and human macrophage-killing KU053_11880 PF06744 Type VI secretion protein IcmF C-terminal KU053_11880 PF14331 ImcF-related N-terminal domain KU053_11895 PF05947 Type VI secretion system, TssF KU053_11910 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU053_11935 PF00005 ABC transporter KU053_11940 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU053_11945 PF01425 Amidase KU053_11950 PF08753 NikR C terminal nickel binding domain KU053_11950 PF01402 Ribbon-helix-helix protein, copG family KU053_11970 PF02525 Flavodoxin-like fold KU053_11975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_11975 PF00289 Biotin carboxylase, N-terminal domain KU053_11975 PF02785 Biotin carboxylase C-terminal domain KU053_11990 PF08240 Alcohol dehydrogenase GroES-like domain KU053_11990 PF13823 Alcohol dehydrogenase GroES-associated KU053_11990 PF00107 Zinc-binding dehydrogenase KU053_12000 PF00440 Bacterial regulatory proteins, tetR family KU053_12020 PF00654 Voltage gated chloride channel KU053_12025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU053_12025 PF00364 Biotin-requiring enzyme KU053_12025 PF00289 Biotin carboxylase, N-terminal domain KU053_12025 PF02785 Biotin carboxylase C-terminal domain KU053_12035 PF07286 Protein of unknown function (DUF1445) KU053_12040 PF03746 LamB/YcsF family KU053_12045 PF01566 Natural resistance-associated macrophage protein KU053_12050 PF03466 LysR substrate binding domain KU053_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_12065 PF03527 RHS protein KU053_12065 PF05593 RHS Repeat KU053_12070 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU053_12070 PF13296 Putative type VI secretion system Rhs element Vgr KU053_12070 PF04717 Type VI secretion system, phage-baseplate injector KU053_12080 PF13419 Haloacid dehalogenase-like hydrolase KU053_12100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU053_12100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU053_12120 PF07690 Major Facilitator Superfamily KU053_12130 PF03279 Bacterial lipid A biosynthesis acyltransferase KU053_12135 PF00563 EAL domain KU053_12135 PF00990 Diguanylate cyclase, GGDEF domain KU053_12135 PF03707 Bacterial signalling protein N terminal repeat KU053_12140 PF00892 EamA-like transporter family KU053_12145 PF01037 Lrp/AsnC ligand binding domain KU053_12150 PF01624 MutS domain I KU053_12150 PF05188 MutS domain II KU053_12150 PF05192 MutS domain III KU053_12150 PF05190 MutS family domain IV KU053_12150 PF00488 MutS domain V KU053_12160 PF00037 4Fe-4S binding domain KU053_12160 PF11953 Domain of unknown function (DUF3470) KU053_12170 PF01596 O-methyltransferase KU053_12180 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_12185 PF01205 Uncharacterized protein family UPF0029 KU053_12195 PF00664 ABC transporter transmembrane region KU053_12195 PF00005 ABC transporter KU053_12195 PF03412 Peptidase C39 family KU053_12200 PF02321 Outer membrane efflux protein KU053_12205 PF00005 ABC transporter KU053_12205 PF12399 Branched-chain amino acid ATP-binding cassette transporter KU053_12210 PF03968 OstA-like protein KU053_12225 PF01380 SIS domain KU053_12225 PF00571 CBS domain KU053_12230 PF01406 tRNA synthetases class I (C) catalytic domain KU053_12230 PF09190 DALR domain KU053_12255 PF01638 HxlR-like helix-turn-helix KU053_12260 PF07690 Major Facilitator Superfamily KU053_12285 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU053_12285 PF03807 NADP oxidoreductase coenzyme F420-dependent KU053_12295 PF00313 'Cold-shock' DNA-binding domain KU053_12300 PF01810 LysE type translocator KU053_12330 PF02601 Exonuclease VII, large subunit KU053_12330 PF13742 OB-fold nucleic acid binding domain KU053_12365 PF09278 MerR, DNA binding KU053_12365 PF00376 MerR family regulatory protein KU053_12370 PF00403 Heavy-metal-associated domain KU053_12375 PF00403 Heavy-metal-associated domain KU053_12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_12380 PF03466 LysR substrate binding domain KU053_12385 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU053_12385 PF00355 Rieske [2Fe-2S] domain KU053_12405 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_12405 PF00175 Oxidoreductase NAD-binding domain KU053_12405 PF00970 Oxidoreductase FAD-binding domain KU053_12410 PF00106 short chain dehydrogenase KU053_12415 PF03594 Benzoate membrane transport protein KU053_12420 PF07690 Major Facilitator Superfamily KU053_12430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KU053_12430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KU053_12435 PF00271 Helicase conserved C-terminal domain KU053_12435 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KU053_12435 PF11898 Domain of unknown function (DUF3418) KU053_12435 PF00270 DEAD/DEAH box helicase KU053_12435 PF04408 Helicase associated domain (HA2) KU053_12440 PF00578 AhpC/TSA family KU053_12440 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU053_12460 PF13192 Thioredoxin domain KU053_12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_12470 PF02798 Glutathione S-transferase, N-terminal domain KU053_12470 PF00043 Glutathione S-transferase, C-terminal domain KU053_12480 PF02390 Putative methyltransferase KU053_12485 PF00043 Glutathione S-transferase, C-terminal domain KU053_12485 PF13417 Glutathione S-transferase, N-terminal domain KU053_12495 PF13488 Glycine zipper KU053_12495 PF00691 OmpA family KU053_12500 PF01979 Amidohydrolase family KU053_12505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU053_12505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU053_12515 PF01170 Putative RNA methylase family UPF0020 KU053_12515 PF02926 THUMP domain KU053_12515 PF10672 S-adenosylmethionine-dependent methyltransferase KU053_12530 PF10431 C-terminal, D2-small domain, of ClpB protein KU053_12530 PF00004 ATPase family associated with various cellular activities (AAA) KU053_12530 PF07724 AAA domain (Cdc48 subfamily) KU053_12530 PF17871 AAA lid domain KU053_12530 PF02861 Clp amino terminal domain, pathogenicity island component KU053_12545 PF02566 OsmC-like protein KU053_12555 PF00027 Cyclic nucleotide-binding domain KU053_12555 PF13545 Crp-like helix-turn-helix domain KU053_12565 PF00248 Aldo/keto reductase family KU053_12580 PF00709 Adenylosuccinate synthetase KU053_12585 PF13393 Histidyl-tRNA synthetase KU053_12590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU053_12590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU053_12595 PF02272 DHHA1 domain KU053_12595 PF01411 tRNA synthetases class II (A) KU053_12595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU053_12600 PF00696 Amino acid kinase family KU053_12600 PF01842 ACT domain KU053_12600 PF13840 ACT domain KU053_12605 PF02599 Global regulator protein family KU053_12610 PF01351 Ribonuclease HII KU053_12620 PF01292 Prokaryotic cytochrome b561 KU053_12625 PF00962 Adenosine/AMP deaminase KU053_12630 PF00860 Permease family KU053_12640 PF00743 Flavin-binding monooxygenase-like KU053_12645 PF00106 short chain dehydrogenase KU053_12655 PF02678 Pirin KU053_12655 PF17954 Quercetinase C-terminal cupin domain KU053_12660 PF17932 Tetracyclin repressor-like, C-terminal domain KU053_12660 PF00440 Bacterial regulatory proteins, tetR family KU053_12670 PF00106 short chain dehydrogenase KU053_12680 PF13610 DDE domain KU053_12690 PF13610 DDE domain KU053_12705 PF00809 Pterin binding enzyme KU053_12710 PF00893 Small Multidrug Resistance protein KU053_12715 PF13427 Domain of unknown function (DUF4111) KU053_12715 PF01909 Nucleotidyltransferase domain KU053_12730 PF00583 Acetyltransferase (GNAT) family KU053_12735 PF13495 Phage integrase, N-terminal SAM-like domain KU053_12735 PF00589 Phage integrase family KU053_12740 PF11809 Domain of unknown function (DUF3330) KU053_12740 PF00563 EAL domain KU053_12750 PF13610 DDE domain KU053_12755 PF01636 Phosphotransferase enzyme family KU053_12770 PF13610 DDE domain KU053_12775 PF02796 Helix-turn-helix domain of resolvase KU053_12775 PF00239 Resolvase, N terminal domain KU053_12785 PF13610 DDE domain KU053_12795 PF02796 Helix-turn-helix domain of resolvase KU053_12795 PF00239 Resolvase, N terminal domain KU053_12800 PF13610 DDE domain KU053_12805 PF00324 Amino acid permease KU053_12810 PF04958 Arginine N-succinyltransferase beta subunit KU053_12815 PF00202 Aminotransferase class-III KU053_12825 PF00171 Aldehyde dehydrogenase family KU053_12835 PF07729 FCD domain KU053_12835 PF00392 Bacterial regulatory proteins, gntR family KU053_12845 PF00324 Amino acid permease KU053_12850 PF01266 FAD dependent oxidoreductase KU053_12855 PF00324 Amino acid permease KU053_12895 PF05593 RHS Repeat KU053_12895 PF03527 RHS protein KU053_12900 PF04717 Type VI secretion system, phage-baseplate injector KU053_12900 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU053_12900 PF13296 Putative type VI secretion system Rhs element Vgr KU053_12920 PF03180 NLPA lipoprotein KU053_12925 PF05987 Bacterial protein of unknown function (DUF898) KU053_12940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_12945 PF00764 Arginosuccinate synthase KU053_12950 PF00360 Phytochrome region KU053_12950 PF00990 Diguanylate cyclase, GGDEF domain KU053_12950 PF00563 EAL domain KU053_12950 PF01590 GAF domain KU053_12955 PF01979 Amidohydrolase family KU053_12960 PF00929 Exonuclease KU053_12970 PF07715 TonB-dependent Receptor Plug Domain KU053_12970 PF00593 TonB dependent receptor KU053_12975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_12975 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_12980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU053_12980 PF00005 ABC transporter KU053_12985 PF00528 Binding-protein-dependent transport system inner membrane component KU053_12985 PF12911 N-terminal TM domain of oligopeptide transport permease C KU053_12990 PF00528 Binding-protein-dependent transport system inner membrane component KU053_12995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KU053_13000 PF01476 LysM domain KU053_13000 PF01464 Transglycosylase SLT domain KU053_13000 PF01464 Transglycosylase SLT domain KU053_13000 PF01476 LysM domain KU053_13005 PF00929 Exonuclease KU053_13015 PF00293 NUDIX domain KU053_13015 PF09297 NADH pyrophosphatase zinc ribbon domain KU053_13025 PF04972 BON domain KU053_13030 PF02021 Uncharacterised protein family UPF0102 KU053_13035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU053_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_13045 PF03466 LysR substrate binding domain KU053_13050 PF01810 LysE type translocator KU053_13060 PF13411 MerR HTH family regulatory protein KU053_13070 PF01494 FAD binding domain KU053_13075 PF01494 FAD binding domain KU053_13080 PF00557 Metallopeptidase family M24 KU053_13080 PF05195 Aminopeptidase P, N-terminal domain KU053_13120 PF00884 Sulfatase KU053_13120 PF08019 Phosphoethanolamine transferase EptA/EptB KU053_13165 PF01551 Peptidase family M23 KU053_13165 PF08525 Opacity-associated protein A N-terminal motif KU053_13165 PF01476 LysM domain KU053_13490 PF01812 5-formyltetrahydrofolate cyclo-ligase family KU053_13500 PF05362 Lon protease (S16) C-terminal proteolytic domain KU053_13500 PF02190 ATP-dependent protease La (LON) substrate-binding domain KU053_13500 PF00004 ATPase family associated with various cellular activities (AAA) KU053_13505 PF02590 Predicted SPOUT methyltransferase KU053_13510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KU053_13520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU053_13520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU053_13525 PF04060 Putative Fe-S cluster KU053_13530 PF10576 Iron-sulfur binding domain of endonuclease III KU053_13530 PF00633 Helix-hairpin-helix motif KU053_13530 PF00730 HhH-GPD superfamily base excision DNA repair protein KU053_13540 PF05191 Adenylate kinase, active site lid KU053_13555 PF00905 Penicillin binding protein transpeptidase domain KU053_13555 PF03717 Penicillin-binding Protein dimerisation domain KU053_13570 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU053_13575 PF01730 UreF KU053_13580 PF05194 UreE urease accessory protein, C-terminal domain KU053_13580 PF02814 UreE urease accessory protein, N-terminal domain KU053_13590 PF00547 Urease, gamma subunit KU053_13595 PF01774 UreD urease accessory protein KU053_13610 PF00463 Isocitrate lyase family KU053_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_13615 PF03466 LysR substrate binding domain KU053_13620 PF01595 Cyclin M transmembrane N-terminal domain KU053_13620 PF03471 Transporter associated domain KU053_13620 PF00571 CBS domain KU053_13625 PF03600 Citrate transporter KU053_13640 PF00009 Elongation factor Tu GTP binding domain KU053_13645 PF01507 Phosphoadenosine phosphosulfate reductase family KU053_13655 PF14052 Capsule assembly protein Wzi KU053_13660 PF01336 OB-fold nucleic acid binding domain KU053_13660 PF00152 tRNA synthetases class II (D, K and N) KU053_13675 PF00301 Rubredoxin KU053_13680 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_13680 PF18113 Rubredoxin binding C-terminal domain KU053_13685 PF00561 alpha/beta hydrolase fold KU053_13690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_13690 PF03466 LysR substrate binding domain KU053_13700 PF13089 Polyphosphate kinase N-terminal domain KU053_13700 PF17941 Polyphosphate kinase C-terminal domain 1 KU053_13700 PF13090 Polyphosphate kinase C-terminal domain 2 KU053_13700 PF02503 Polyphosphate kinase middle domain KU053_13705 PF00912 Transglycosylase KU053_13710 PF01694 Rhomboid family KU053_13720 PF00005 ABC transporter KU053_13725 PF13472 GDSL-like Lipase/Acylhydrolase family KU053_13730 PF00484 Carbonic anhydrase KU053_13735 PF00561 alpha/beta hydrolase fold KU053_13745 PF07715 TonB-dependent Receptor Plug Domain KU053_13745 PF00593 TonB dependent receptor KU053_13750 PF01106 NifU-like domain KU053_13750 PF01521 Iron-sulphur cluster biosynthesis KU053_13760 PF00884 Sulfatase KU053_13765 PF03781 Sulfatase-modifying factor enzyme 1 KU053_13780 PF00291 Pyridoxal-phosphate dependent enzyme KU053_13785 PF01384 Phosphate transporter family KU053_13790 PF02310 B12 binding domain KU053_13790 PF02607 B12 binding domain KU053_13790 PF02965 Vitamin B12 dependent methionine synthase, activation domain KU053_13790 PF00809 Pterin binding enzyme KU053_13790 PF02574 Homocysteine S-methyltransferase KU053_13795 PF02779 Transketolase, pyrimidine binding domain KU053_13795 PF02780 Transketolase, C-terminal domain KU053_13800 PF00456 Transketolase, thiamine diphosphate binding domain KU053_13805 PF07690 Major Facilitator Superfamily KU053_13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_13815 PF03466 LysR substrate binding domain KU053_13825 PF01263 Aldose 1-epimerase KU053_13830 PF07690 Major Facilitator Superfamily KU053_13835 PF12833 Helix-turn-helix domain KU053_13835 PF02311 AraC-like ligand binding domain KU053_13840 PF04960 Glutaminase KU053_13845 PF01327 Polypeptide deformylase KU053_13850 PF07690 Major Facilitator Superfamily KU053_13860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU053_13860 PF00205 Thiamine pyrophosphate enzyme, central domain KU053_13860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU053_13865 PF00171 Aldehyde dehydrogenase family KU053_13870 PF01958 Domain of unknown function DUF108 KU053_13870 PF03447 Homoserine dehydrogenase, NAD binding domain KU053_13880 PF12697 Alpha/beta hydrolase family KU053_13890 PF07690 Major Facilitator Superfamily KU053_13895 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_13895 PF14759 Reductase C-terminal KU053_13900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU053_13910 PF00355 Rieske [2Fe-2S] domain KU053_13920 PF00355 Rieske [2Fe-2S] domain KU053_13925 PF09339 IclR helix-turn-helix domain KU053_13925 PF01614 Bacterial transcriptional regulator KU053_13940 PF00378 Enoyl-CoA hydratase/isomerase KU053_13950 PF00535 Glycosyl transferase family 2 KU053_13955 PF01522 Polysaccharide deacetylase KU053_13955 PF14883 Hypothetical glycosyl hydrolase family 13 KU053_13960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_13965 PF07152 YaeQ protein KU053_13970 PF00375 Sodium:dicarboxylate symporter family KU053_13975 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU053_13975 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU053_13985 PF03061 Thioesterase superfamily KU053_13995 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_14000 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_14005 PF00440 Bacterial regulatory proteins, tetR family KU053_14005 PF13977 BetI-type transcriptional repressor, C-terminal KU053_14010 PF00171 Aldehyde dehydrogenase family KU053_14015 PF05199 GMC oxidoreductase KU053_14015 PF00732 GMC oxidoreductase KU053_14020 PF06039 Malate:quinone oxidoreductase (Mqo) KU053_14030 PF02574 Homocysteine S-methyltransferase KU053_14035 PF13520 Amino acid permease KU053_14060 PF00701 Dihydrodipicolinate synthetase family KU053_14065 PF00083 Sugar (and other) transporter KU053_14180 PF02768 DNA polymerase III beta subunit, C-terminal domain KU053_14180 PF02767 DNA polymerase III beta subunit, central domain KU053_14180 PF00712 DNA polymerase III beta subunit, N-terminal domain KU053_14220 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KU053_14370 PF07007 Lysozyme inhibitor LprI KU053_14415 PF01695 IstB-like ATP binding protein KU053_14425 PF00145 C-5 cytosine-specific DNA methylase KU053_14470 PF00717 Peptidase S24-like KU053_14470 PF01381 Helix-turn-helix KU053_14505 PF00929 Exonuclease KU053_14580 PF07690 Major Facilitator Superfamily KU053_14585 PF13533 Biotin-lipoyl like KU053_14590 PF03061 Thioesterase superfamily KU053_14595 PF00490 Delta-aminolevulinic acid dehydratase KU053_14600 PF01266 FAD dependent oxidoreductase KU053_14605 PF08338 Domain of unknown function (DUF1731) KU053_14605 PF01370 NAD dependent epimerase/dehydratase family KU053_14625 PF12320 Type 5 capsule protein repressor C-terminal domain KU053_14625 PF00149 Calcineurin-like phosphoesterase KU053_14635 PF01168 Alanine racemase, N-terminal domain KU053_14640 PF00437 Type II/IV secretion system protein KU053_14645 PF00437 Type II/IV secretion system protein KU053_14650 PF01475 Ferric uptake regulator family KU053_14655 PF04355 SmpA / OmlA family KU053_14660 PF03658 RnfH family Ubiquitin KU053_14670 PF01814 Hemerythrin HHE cation binding domain KU053_14675 PF13230 Glutamine amidotransferases class-II KU053_14685 PF00696 Amino acid kinase family KU053_14690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU053_14690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU053_14690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU053_14690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU053_14695 PF00692 dUTPase KU053_14700 PF00580 UvrD/REP helicase N-terminal domain KU053_14700 PF13361 UvrD-like helicase C-terminal domain KU053_14705 PF13488 Glycine zipper KU053_14705 PF00691 OmpA family KU053_14710 PF01553 Acyltransferase KU053_14720 PF03775 Septum formation inhibitor MinC, C-terminal domain KU053_14725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KU053_14730 PF03776 Septum formation topological specificity factor MinE KU053_14750 PF01810 LysE type translocator KU053_14755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KU053_14755 PF17854 FtsK alpha domain KU053_14755 PF09397 Ftsk gamma domain KU053_14755 PF01580 FtsK/SpoIIIE family KU053_14760 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU053_14765 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KU053_14770 PF04377 Arginine-tRNA-protein transferase, C terminus KU053_14770 PF04376 Arginine-tRNA-protein transferase, N terminus KU053_14775 PF00583 Acetyltransferase (GNAT) family KU053_14790 PF03144 Elongation factor Tu domain 2 KU053_14790 PF00009 Elongation factor Tu GTP binding domain KU053_14790 PF03143 Elongation factor Tu C-terminal domain KU053_14795 PF00679 Elongation factor G C-terminus KU053_14795 PF14492 Elongation Factor G, domain II KU053_14795 PF03764 Elongation factor G, domain IV KU053_14795 PF00009 Elongation factor Tu GTP binding domain KU053_14795 PF03144 Elongation factor Tu domain 2 KU053_14800 PF00177 Ribosomal protein S7p/S5e KU053_14805 PF00164 Ribosomal protein S12/S23 KU053_14815 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_14815 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_14820 PF03653 Uncharacterised protein family (UPF0093) KU053_14825 PF02678 Pirin KU053_14825 PF05726 Pirin C-terminal cupin domain KU053_14835 PF02540 NAD synthase KU053_14835 PF00795 Carbon-nitrogen hydrolase KU053_14850 PF00970 Oxidoreductase FAD-binding domain KU053_14850 PF00175 Oxidoreductase NAD-binding domain KU053_14850 PF00111 2Fe-2S iron-sulfur cluster binding domain KU053_14855 PF00171 Aldehyde dehydrogenase family KU053_14860 PF00355 Rieske [2Fe-2S] domain KU053_14860 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU053_14865 PF07859 alpha/beta hydrolase fold KU053_14870 PF02028 BCCT, betaine/carnitine/choline family transporter KU053_14875 PF00180 Isocitrate/isopropylmalate dehydrogenase KU053_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_14880 PF03466 LysR substrate binding domain KU053_14900 PF00037 4Fe-4S binding domain KU053_14905 PF01467 Cytidylyltransferase-like KU053_14910 PF01668 SmpB protein KU053_14915 PF03358 NADPH-dependent FMN reductase KU053_14920 PF02578 Multi-copper polyphenol oxidoreductase laccase KU053_14925 PF00849 RNA pseudouridylate synthase KU053_14925 PF01479 S4 domain KU053_14930 PF13525 Outer membrane lipoprotein KU053_14935 PF10410 DnaB-helicase binding domain of primase KU053_14935 PF08278 DNA primase DnaG DnaB-binding KU053_14935 PF08275 DNA primase catalytic core, N-terminal domain KU053_14935 PF01807 CHC2 zinc finger KU053_14940 PF01488 Shikimate / quinate 5-dehydrogenase KU053_14940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KU053_14940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KU053_14950 PF03550 Outer membrane lipoprotein LolB KU053_14955 PF00288 GHMP kinases N terminal domain KU053_14955 PF08544 GHMP kinases C terminal KU053_14980 PF14572 Phosphoribosyl synthetase-associated domain KU053_14980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU053_14985 PF01386 Ribosomal L25p family KU053_14990 PF01195 Peptidyl-tRNA hydrolase KU053_14995 PF02261 Aspartate decarboxylase KU053_15010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU053_15020 PF08543 Phosphomethylpyrimidine kinase KU053_15020 PF02581 Thiamine monophosphate synthase KU053_15020 PF03070 TENA/THI-4/PQQC family KU053_15025 PF04972 BON domain KU053_15025 PF01476 LysM domain KU053_15030 PF00550 Phosphopantetheine attachment site KU053_15040 PF00698 Acyl transferase domain KU053_15045 PF01783 Ribosomal L32p protein family KU053_15050 PF02620 Large ribosomal RNA subunit accumulation protein YceD KU053_15055 PF04315 Elongation factor P hydroxylase KU053_15060 PF01300 Telomere recombination KU053_15065 PF02616 Segregation and condensation protein ScpA KU053_15070 PF04079 Segregation and condensation complex subunit ScpB KU053_15075 PF01479 S4 domain KU053_15075 PF00849 RNA pseudouridylate synthase KU053_15090 PF00155 Aminotransferase class I and II KU053_15095 PF00202 Aminotransferase class-III KU053_15095 PF06968 Biotin and Thiamin Synthesis associated domain KU053_15095 PF04055 Radical SAM superfamily KU053_15100 PF12697 Alpha/beta hydrolase family KU053_15100 PF08241 Methyltransferase domain KU053_15105 PF02358 Trehalose-phosphatase KU053_15110 PF00982 Glycosyltransferase family 20 KU053_15115 PF07690 Major Facilitator Superfamily KU053_15120 PF00210 Ferritin-like domain KU053_15125 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KU053_15125 PF12826 Helix-hairpin-helix motif KU053_15125 PF00533 BRCA1 C Terminus (BRCT) domain KU053_15125 PF03120 NAD-dependent DNA ligase OB-fold domain KU053_15125 PF01653 NAD-dependent DNA ligase adenylation domain KU053_15135 PF06470 SMC proteins Flexible Hinge Domain KU053_15135 PF02463 RecF/RecN/SMC N terminal domain KU053_15145 PF01925 Sulfite exporter TauE/SafE KU053_15155 PF03309 Type III pantothenate kinase KU053_15160 PF00448 SRP54-type protein, GTPase domain KU053_15160 PF02881 SRP54-type protein, helical bundle domain KU053_15160 PF02978 Signal peptide binding domain KU053_15170 PF01207 Dihydrouridine synthase (Dus) KU053_15200 PF00692 dUTPase KU053_15215 PF01048 Phosphorylase superfamily KU053_15220 PF10609 NUBPL iron-transfer P-loop NTPase KU053_15230 PF09334 tRNA synthetases class I (M) KU053_15230 PF01588 Putative tRNA binding domain KU053_15255 PF13533 Biotin-lipoyl like KU053_15260 PF00291 Pyridoxal-phosphate dependent enzyme KU053_15275 PF05552 Conserved TM helix KU053_15290 PF00970 Oxidoreductase FAD-binding domain KU053_15290 PF00175 Oxidoreductase NAD-binding domain KU053_15295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_15295 PF03466 LysR substrate binding domain KU053_15300 PF00313 'Cold-shock' DNA-binding domain KU053_15310 PF00361 Proton-conducting membrane transporter KU053_15315 PF00361 Proton-conducting membrane transporter KU053_15320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU053_15320 PF00361 Proton-conducting membrane transporter KU053_15325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU053_15330 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KU053_15335 PF12838 4Fe-4S dicluster domain KU053_15340 PF00146 NADH dehydrogenase KU053_15345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU053_15345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KU053_15345 PF00384 Molybdopterin oxidoreductase KU053_15350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KU053_15350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KU053_15350 PF10531 SLBB domain KU053_15360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KU053_15360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KU053_15365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KU053_15370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KU053_15375 PF17151 Periplasmic sensor domain KU053_15375 PF00990 Diguanylate cyclase, GGDEF domain KU053_15385 PF00672 HAMP domain KU053_15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_15385 PF00512 His Kinase A (phospho-acceptor) domain KU053_15390 PF00072 Response regulator receiver domain KU053_15390 PF00486 Transcriptional regulatory protein, C terminal KU053_15400 PF03477 ATP cone domain KU053_15400 PF02867 Ribonucleotide reductase, barrel domain KU053_15400 PF00317 Ribonucleotide reductase, all-alpha domain KU053_15410 PF00268 Ribonucleotide reductase, small chain KU053_15420 PF00672 HAMP domain KU053_15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_15420 PF00512 His Kinase A (phospho-acceptor) domain KU053_15420 PF13756 Stimulus-sensing domain KU053_15420 PF13755 Sensor N-terminal transmembrane domain KU053_15500 PF13360 PQQ-like domain KU053_15500 PF01011 PQQ enzyme repeat KU053_15525 PF02567 Phenazine biosynthesis-like protein KU053_15545 PF01613 Flavin reductase like domain KU053_15550 PF08267 Cobalamin-independent synthase, N-terminal domain KU053_15550 PF01717 Cobalamin-independent synthase, Catalytic domain KU053_15560 PF03466 LysR substrate binding domain KU053_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_15565 PF01810 LysE type translocator KU053_15575 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU053_15575 PF12833 Helix-turn-helix domain KU053_15580 PF07687 Peptidase dimerisation domain KU053_15580 PF01546 Peptidase family M20/M25/M40 KU053_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_15590 PF03466 LysR substrate binding domain KU053_15595 PF07690 Major Facilitator Superfamily KU053_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_15605 PF03466 LysR substrate binding domain KU053_15610 PF14537 Cytochrome c3 KU053_15610 PF00890 FAD binding domain KU053_15620 PF02515 CoA-transferase family III KU053_15625 PF07690 Major Facilitator Superfamily KU053_15630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_15630 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_15630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_15635 PF03466 LysR substrate binding domain KU053_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_15640 PF08240 Alcohol dehydrogenase GroES-like domain KU053_15640 PF00107 Zinc-binding dehydrogenase KU053_15645 PF00962 Adenosine/AMP deaminase KU053_15670 PF02445 Quinolinate synthetase A protein KU053_15675 PF01960 ArgJ family KU053_15680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU053_15680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU053_15685 PF00893 Small Multidrug Resistance protein KU053_15695 PF05275 Copper resistance protein B precursor (CopB) KU053_15700 PF00394 Multicopper oxidase KU053_15700 PF07731 Multicopper oxidase KU053_15700 PF07732 Multicopper oxidase KU053_15715 PF00834 Ribulose-phosphate 3 epimerase family KU053_15725 PF00756 Putative esterase KU053_15735 PF04445 Putative SAM-dependent methyltransferase KU053_15740 PF00814 Glycoprotease family KU053_15745 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_15750 PF00293 NUDIX domain KU053_15790 PF04715 Anthranilate synthase component I, N terminal region KU053_15790 PF00425 chorismate binding enzyme KU053_15795 PF00155 Aminotransferase class I and II KU053_15800 PF00815 Histidinol dehydrogenase KU053_15805 PF01634 ATP phosphoribosyltransferase KU053_15810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU053_15815 PF01722 BolA-like protein KU053_15820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KU053_15825 PF00309 Sigma-54 factor, Activator interacting domain (AID) KU053_15825 PF04963 Sigma-54 factor, core binding domain KU053_15825 PF04552 Sigma-54, DNA binding domain KU053_15870 PF00795 Carbon-nitrogen hydrolase KU053_15880 PF01047 MarR family KU053_15885 PF02566 OsmC-like protein KU053_15890 PF00437 Type II/IV secretion system protein KU053_15910 PF01367 5'-3' exonuclease, C-terminal SAM fold KU053_15910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU053_15910 PF01612 3'-5' exonuclease KU053_15910 PF00476 DNA polymerase family A KU053_15915 PF02325 YGGT family KU053_15920 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU053_15920 PF03807 NADP oxidoreductase coenzyme F420-dependent KU053_15925 PF01171 PP-loop family KU053_15925 PF09179 TilS substrate binding domain KU053_15925 PF11734 TilS substrate C-terminal domain KU053_15930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KU053_15935 PF02541 Ppx/GppA phosphatase family KU053_15940 PF00085 Thioredoxin KU053_15945 PF07498 Rho termination factor, N-terminal domain KU053_15945 PF07497 Rho termination factor, RNA-binding domain KU053_15945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU053_15960 PF00216 Bacterial DNA-binding protein KU053_15965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KU053_15965 PF01588 Putative tRNA binding domain KU053_15965 PF03147 Ferredoxin-fold anticodon binding domain KU053_15965 PF03484 tRNA synthetase B5 domain KU053_15965 PF03483 B3/4 domain KU053_15970 PF01409 tRNA synthetases class II core domain (F) KU053_15970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KU053_15990 PF00453 Ribosomal protein L20 KU053_15995 PF01632 Ribosomal protein L35 KU053_16000 PF07690 Major Facilitator Superfamily KU053_16005 PF09335 SNARE associated Golgi protein KU053_16010 PF00043 Glutathione S-transferase, C-terminal domain KU053_16010 PF02798 Glutathione S-transferase, N-terminal domain KU053_16015 PF00707 Translation initiation factor IF-3, C-terminal domain KU053_16015 PF05198 Translation initiation factor IF-3, N-terminal domain KU053_16020 PF03129 Anticodon binding domain KU053_16020 PF02824 TGS domain KU053_16020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU053_16020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU053_16025 PF00501 AMP-binding enzyme KU053_16025 PF13193 AMP-binding enzyme C-terminal domain KU053_16030 PF04751 Protein of unknown function (DUF615) KU053_16035 PF00381 PTS HPr component phosphorylation site KU053_16040 PF03668 P-loop ATPase protein family KU053_16045 PF02569 Pantoate-beta-alanine ligase KU053_16050 PF02548 Ketopantoate hydroxymethyltransferase KU053_16055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KU053_16060 PF12626 Polymerase A arginine-rich C-terminus KU053_16060 PF12627 Probable RNA and SrmB- binding site of polymerase A KU053_16060 PF01743 Poly A polymerase head domain KU053_16070 PF03819 MazG nucleotide pyrophosphohydrolase domain KU053_16080 PF13291 ACT domain KU053_16080 PF04607 Region found in RelA / SpoT proteins KU053_16080 PF02824 TGS domain KU053_16085 PF05958 tRNA (Uracil-5-)-methyltransferase KU053_16095 PF00291 Pyridoxal-phosphate dependent enzyme KU053_16100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KU053_16100 PF01627 Hpt domain KU053_16100 PF00512 His Kinase A (phospho-acceptor) domain KU053_16100 PF00072 Response regulator receiver domain KU053_16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_16100 PF00672 HAMP domain KU053_16105 PF00378 Enoyl-CoA hydratase/isomerase KU053_16110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU053_16110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU053_16115 PF01261 Xylose isomerase-like TIM barrel KU053_16125 PF00106 short chain dehydrogenase KU053_16130 PF02233 NAD(P) transhydrogenase beta subunit KU053_16135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KU053_16140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KU053_16140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KU053_16145 PF00892 EamA-like transporter family KU053_16155 PF07690 Major Facilitator Superfamily KU053_16160 PF01207 Dihydrouridine synthase (Dus) KU053_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_16170 PF03466 LysR substrate binding domain KU053_16180 PF00899 ThiF family KU053_16190 PF00694 Aconitase C-terminal domain KU053_16190 PF00330 Aconitase family (aconitate hydratase) KU053_16195 PF01026 TatD related DNase KU053_16210 PF00009 Elongation factor Tu GTP binding domain KU053_16210 PF16658 Class II release factor RF3, C-terminal domain KU053_16210 PF03144 Elongation factor Tu domain 2 KU053_16230 PF03707 Bacterial signalling protein N terminal repeat KU053_16230 PF00990 Diguanylate cyclase, GGDEF domain KU053_16230 PF00563 EAL domain KU053_16235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KU053_16235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KU053_16240 PF10369 Small subunit of acetolactate synthase KU053_16245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU053_16245 PF00205 Thiamine pyrophosphate enzyme, central domain KU053_16245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU053_16255 PF08264 Anticodon-binding domain of tRNA KU053_16255 PF00133 tRNA synthetases class I (I, L, M and V) KU053_16255 PF13603 Leucyl-tRNA synthetase, Domain 2 KU053_16255 PF09334 tRNA synthetases class I (M) KU053_16270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU053_16275 PF00005 ABC transporter KU053_16275 PF02687 FtsX-like permease family KU053_16275 PF12704 MacB-like periplasmic core domain KU053_16280 PF02321 Outer membrane efflux protein KU053_16295 PF00929 Exonuclease KU053_16300 PF03193 RsgA GTPase KU053_16310 PF00462 Glutaredoxin KU053_16315 PF02556 Preprotein translocase subunit SecB KU053_16330 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_16330 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_16345 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_16345 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_16355 PF04820 Tryptophan halogenase KU053_16375 PF00221 Aromatic amino acid lyase KU053_16390 PF00501 AMP-binding enzyme KU053_16390 PF13193 AMP-binding enzyme C-terminal domain KU053_16400 PF00550 Phosphopantetheine attachment site KU053_16405 PF00550 Phosphopantetheine attachment site KU053_16420 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KU053_16420 PF01926 50S ribosome-binding GTPase KU053_16425 PF13360 PQQ-like domain KU053_16435 PF03129 Anticodon binding domain KU053_16435 PF13393 Histidyl-tRNA synthetase KU053_16440 PF04551 GcpE protein KU053_16445 PF13464 Domain of unknown function (DUF4115) KU053_16455 PF04055 Radical SAM superfamily KU053_16460 PF00334 Nucleoside diphosphate kinase KU053_16465 PF04384 Iron-sulphur cluster assembly KU053_16470 PF01569 PAP2 superfamily KU053_16475 PF13439 Glycosyltransferase Family 4 KU053_16475 PF00534 Glycosyl transferases group 1 KU053_16480 PF11818 C-terminal domain of tail specific protease (DUF3340) KU053_16480 PF00595 PDZ domain KU053_16480 PF03572 Peptidase family S41 KU053_16480 PF17804 Tail specific protease N-terminal domain KU053_16485 PF00933 Glycosyl hydrolase family 3 N terminal domain KU053_16495 PF00561 alpha/beta hydrolase fold KU053_16500 PF00171 Aldehyde dehydrogenase family KU053_16505 PF00171 Aldehyde dehydrogenase family KU053_16510 PF01202 Shikimate kinase KU053_16515 PF02447 GntP family permease KU053_16520 PF01081 KDPG and KHG aldolase KU053_16525 PF00920 Dehydratase family KU053_16530 PF00871 Acetokinase family KU053_16535 PF07085 DRTGG domain KU053_16535 PF01515 Phosphate acetyl/butaryl transferase KU053_16540 PF05681 Fumarate hydratase (Fumerase) KU053_16540 PF05683 Fumarase C-terminus KU053_16555 PF06689 ClpX C4-type zinc finger KU053_16555 PF10431 C-terminal, D2-small domain, of ClpB protein KU053_16555 PF07724 AAA domain (Cdc48 subfamily) KU053_16560 PF00574 Clp protease KU053_16565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_16565 PF05697 Bacterial trigger factor protein (TF) KU053_16565 PF05698 Bacterial trigger factor protein (TF) C-terminus KU053_16570 PF07715 TonB-dependent Receptor Plug Domain KU053_16570 PF00593 TonB dependent receptor KU053_16575 PF13640 2OG-Fe(II) oxygenase superfamily KU053_16575 PF18331 PKHD-type hydroxylase C-terminal domain KU053_16580 PF08502 LeuA allosteric (dimerisation) domain KU053_16580 PF00682 HMGL-like KU053_16585 PF00561 alpha/beta hydrolase fold KU053_16590 PF00561 alpha/beta hydrolase fold KU053_16590 PF07021 Methionine biosynthesis protein MetW KU053_16600 PF01725 Ham1 family KU053_16610 PF02416 mttA/Hcf106 family KU053_16615 PF02416 mttA/Hcf106 family KU053_16620 PF00902 Sec-independent protein translocase protein (TatC) KU053_16640 PF01790 Prolipoprotein diacylglyceryl transferase KU053_16655 PF00303 Thymidylate synthase KU053_16660 PF00186 Dihydrofolate reductase KU053_16670 PF01625 Peptide methionine sulfoxide reductase KU053_16680 PF01618 MotA/TolQ/ExbB proton channel family KU053_16690 PF01842 ACT domain KU053_16690 PF00551 Formyl transferase KU053_16700 PF00171 Aldehyde dehydrogenase family KU053_16705 PF00830 Ribosomal L28 family KU053_16710 PF00471 Ribosomal protein L33 KU053_16715 PF02254 TrkA-N domain KU053_16715 PF00999 Sodium/hydrogen exchanger family KU053_16735 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KU053_16740 PF00580 UvrD/REP helicase N-terminal domain KU053_16740 PF13361 UvrD-like helicase C-terminal domain KU053_16755 PF08272 Topoisomerase I zinc-ribbon-like KU053_16755 PF01131 DNA topoisomerase KU053_16755 PF01751 Toprim domain KU053_16755 PF01396 Topoisomerase DNA binding C4 zinc finger KU053_16765 PF01638 HxlR-like helix-turn-helix KU053_16770 PF00107 Zinc-binding dehydrogenase KU053_16770 PF08240 Alcohol dehydrogenase GroES-like domain KU053_16775 PF04102 SlyX KU053_16780 PF00005 ABC transporter KU053_16780 PF16326 ABC transporter C-terminal domain KU053_16780 PF12848 ABC transporter KU053_16785 PF01810 LysE type translocator KU053_16790 PF03279 Bacterial lipid A biosynthesis acyltransferase KU053_16800 PF00375 Sodium:dicarboxylate symporter family KU053_16810 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU053_16810 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU053_16830 PF01416 tRNA pseudouridine synthase KU053_16840 PF01176 Translation initiation factor 1A / IF-1 KU053_16855 PF00180 Isocitrate/isopropylmalate dehydrogenase KU053_16865 PF00694 Aconitase C-terminal domain KU053_16870 PF00330 Aconitase family (aconitate hydratase) KU053_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_16880 PF03466 LysR substrate binding domain KU053_16900 PF00293 NUDIX domain KU053_16905 PF01590 GAF domain KU053_16905 PF05524 PEP-utilising enzyme, N-terminal KU053_16905 PF00391 PEP-utilising enzyme, mobile domain KU053_16905 PF02896 PEP-utilising enzyme, TIM barrel domain KU053_16910 PF00141 Peroxidase KU053_16915 PF12706 Beta-lactamase superfamily domain KU053_16920 PF03466 LysR substrate binding domain KU053_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_16930 PF02798 Glutathione S-transferase, N-terminal domain KU053_16935 PF13280 WYL domain KU053_16935 PF08279 HTH domain KU053_16940 PF13419 Haloacid dehalogenase-like hydrolase KU053_16945 PF00849 RNA pseudouridylate synthase KU053_16945 PF01479 S4 domain KU053_16950 PF00575 S1 RNA binding domain KU053_16950 PF12111 Polyribonucleotide phosphorylase C terminal KU053_16950 PF10150 Ribonuclease E/G family KU053_16955 PF00501 AMP-binding enzyme KU053_16955 PF13193 AMP-binding enzyme C-terminal domain KU053_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU053_16970 PF03466 LysR substrate binding domain KU053_16975 PF00106 short chain dehydrogenase KU053_16980 PF06969 HemN C-terminal domain KU053_16980 PF04055 Radical SAM superfamily KU053_16990 PF01554 MatE KU053_16995 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_16995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_16995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU053_17000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_17000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU053_17005 PF03109 ABC1 family KU053_17010 PF01197 Ribosomal protein L31 KU053_17025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KU053_17045 PF03884 DNA gyrase inhibitor YacG KU053_17050 PF00753 Metallo-beta-lactamase superfamily KU053_17055 PF00762 Ferrochelatase KU053_17065 PF01177 Asp/Glu/Hydantoin racemase KU053_17080 PF01206 Sulfurtransferase TusA KU053_17085 PF00571 CBS domain KU053_17085 PF03471 Transporter associated domain KU053_17090 PF00795 Carbon-nitrogen hydrolase KU053_17095 PF01588 Putative tRNA binding domain KU053_17105 PF07963 Prokaryotic N-terminal methylation motif KU053_17105 PF08334 Type II secretion system (T2SS), protein G KU053_17110 PF00482 Type II secretion system (T2SS), protein F KU053_17115 PF17764 3′ DNA-binding domain (3′BD) KU053_17115 PF00271 Helicase conserved C-terminal domain KU053_17115 PF00270 DEAD/DEAH box helicase KU053_17115 PF18074 Primosomal protein N C-terminal domain KU053_17115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KU053_17120 PF00999 Sodium/hydrogen exchanger family KU053_17120 PF02254 TrkA-N domain KU053_17125 PF01430 Hsp33 protein KU053_17135 PF00226 DnaJ domain KU053_17135 PF01556 DnaJ C terminal domain KU053_17145 PF01544 CorA-like Mg2+ transporter protein KU053_17150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KU053_17150 PF01138 3' exoribonuclease family, domain 1 KU053_17150 PF00575 S1 RNA binding domain KU053_17150 PF00013 KH domain KU053_17150 PF03725 3' exoribonuclease family, domain 2 KU053_17155 PF00312 Ribosomal protein S15 KU053_17160 PF00144 Beta-lactamase KU053_17165 PF13538 UvrD-like helicase C-terminal domain KU053_17170 PF12705 PD-(D/E)XK nuclease superfamily KU053_17170 PF00580 UvrD/REP helicase N-terminal domain KU053_17170 PF13361 UvrD-like helicase C-terminal domain KU053_17175 PF17946 RecC C-terminal domain KU053_17185 PF03976 Polyphosphate kinase 2 (PPK2) KU053_17195 PF01209 ubiE/COQ5 methyltransferase family KU053_17205 PF03109 ABC1 family KU053_17210 PF01494 FAD binding domain KU053_17215 PF01502 Phosphoribosyl-AMP cyclohydrolase KU053_17230 PF13244 Domain of unknown function (DUF4040) KU053_17230 PF00361 Proton-conducting membrane transporter KU053_17230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU053_17230 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KU053_17235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU053_17240 PF00361 Proton-conducting membrane transporter KU053_17245 PF01899 Na+/H+ ion antiporter subunit KU053_17250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KU053_17255 PF03334 Na+/H+ antiporter subunit KU053_17260 PF02033 Ribosome-binding factor A KU053_17265 PF08364 Bacterial translation initiation factor IF-2 associated region KU053_17265 PF00009 Elongation factor Tu GTP binding domain KU053_17265 PF04760 Translation initiation factor IF-2, N-terminal region KU053_17265 PF11987 Translation-initiation factor 2 KU053_17270 PF00575 S1 RNA binding domain KU053_17270 PF08529 NusA N-terminal domain KU053_17270 PF13184 NusA-like KH domain KU053_17275 PF02576 RimP N-terminal domain KU053_17275 PF17384 RimP C-terminal SH3 domain KU053_17295 PF03840 Preprotein translocase SecG subunit KU053_17300 PF00121 Triosephosphate isomerase KU053_17305 PF00437 Type II/IV secretion system protein KU053_17305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU053_17310 PF00482 Type II secretion system (T2SS), protein F KU053_17315 PF01478 Type IV leader peptidase family KU053_17315 PF06750 Bacterial Peptidase A24 N-terminal domain KU053_17320 PF01121 Dephospho-CoA kinase KU053_17330 PF00588 SpoU rRNA Methylase family KU053_17330 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU053_17335 PF06865 Pyrimidine/purine nucleoside phosphorylase KU053_17345 PF02463 RecF/RecN/SMC N terminal domain KU053_17350 PF02622 Uncharacterized ACR, COG1678 KU053_17355 PF03652 Holliday junction resolvase KU053_17360 PF13533 Biotin-lipoyl like KU053_17385 PF02805 Metal binding domain of Ada KU053_17385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU053_17385 PF12833 Helix-turn-helix domain KU053_17385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU053_17390 PF01066 CDP-alcohol phosphatidyltransferase KU053_17400 PF01541 GIY-YIG catalytic domain KU053_17400 PF02151 UvrB/uvrC motif KU053_17400 PF08459 UvrC Helix-hairpin-helix N-terminal KU053_17420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU053_17420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU053_17420 PF00378 Enoyl-CoA hydratase/isomerase KU053_17425 PF02803 Thiolase, C-terminal domain KU053_17425 PF00108 Thiolase, N-terminal domain KU053_17445 PF00376 MerR family regulatory protein KU053_17445 PF09278 MerR, DNA binding KU053_17455 PF01323 DSBA-like thioredoxin domain KU053_17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_17470 PF00183 Hsp90 protein KU053_17485 PF13726 Na+-H+ antiporter family KU053_17485 PF03553 Na+/H+ antiporter family KU053_17490 PF00561 alpha/beta hydrolase fold KU053_17510 PF04998 RNA polymerase Rpb1, domain 5 KU053_17510 PF05000 RNA polymerase Rpb1, domain 4 KU053_17510 PF00623 RNA polymerase Rpb1, domain 2 KU053_17510 PF04983 RNA polymerase Rpb1, domain 3 KU053_17510 PF04997 RNA polymerase Rpb1, domain 1 KU053_17515 PF04561 RNA polymerase Rpb2, domain 2 KU053_17515 PF04563 RNA polymerase beta subunit KU053_17515 PF04565 RNA polymerase Rpb2, domain 3 KU053_17515 PF10385 RNA polymerase beta subunit external 1 domain KU053_17515 PF00562 RNA polymerase Rpb2, domain 6 KU053_17515 PF04560 RNA polymerase Rpb2, domain 7 KU053_17520 PF16320 Ribosomal protein L7/L12 dimerisation domain KU053_17520 PF00542 Ribosomal protein L7/L12 C-terminal domain KU053_17525 PF00466 Ribosomal protein L10 KU053_17530 PF00687 Ribosomal protein L1p/L10e family KU053_17535 PF00298 Ribosomal protein L11, RNA binding domain KU053_17535 PF03946 Ribosomal protein L11, N-terminal domain KU053_17540 PF00467 KOW motif KU053_17540 PF02357 Transcription termination factor nusG KU053_17545 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KU053_17555 PF00009 Elongation factor Tu GTP binding domain KU053_17555 PF03143 Elongation factor Tu C-terminal domain KU053_17555 PF03144 Elongation factor Tu domain 2 KU053_17580 PF04715 Anthranilate synthase component I, N terminal region KU053_17580 PF00425 chorismate binding enzyme KU053_17585 PF13419 Haloacid dehalogenase-like hydrolase KU053_17590 PF00498 FHA domain KU053_17590 PF12401 Protein of unknown function (DUF2662) KU053_17595 PF00263 Bacterial type II and III secretion system protein KU053_17595 PF03958 Bacterial type II/III secretion system short domain KU053_17610 PF00816 H-NS histone family KU053_17635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KU053_17635 PF03900 Porphobilinogen deaminase, C-terminal domain KU053_17640 PF04397 LytTr DNA-binding domain KU053_17640 PF00072 Response regulator receiver domain KU053_17645 PF06580 Histidine kinase KU053_17645 PF07694 5TMR of 5TMR-LYT KU053_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_17650 PF14698 Argininosuccinate lyase C-terminal KU053_17650 PF00206 Lyase KU053_17655 PF04362 Bacterial Fe(2+) trafficking KU053_17660 PF01895 PhoU domain KU053_17665 PF02321 Outer membrane efflux protein KU053_17670 PF00892 EamA-like transporter family KU053_17685 PF13667 ThiC-associated domain KU053_17685 PF01964 Radical SAM ThiC family KU053_17690 PF00293 NUDIX domain KU053_17695 PF00149 Calcineurin-like phosphoesterase KU053_17700 PF01258 Prokaryotic dksA/traR C4-type zinc finger KU053_17705 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU053_17710 PF01098 Cell cycle protein KU053_17715 PF08245 Mur ligase middle domain KU053_17715 PF02875 Mur ligase family, glutamate ligase domain KU053_17725 PF07670 Nucleoside recognition KU053_17725 PF02421 Ferrous iron transport protein B KU053_17725 PF07664 Ferrous iron transport protein B C terminus KU053_17735 PF00589 Phage integrase family KU053_17735 PF02899 Phage integrase, N-terminal SAM-like domain KU053_17740 PF13098 Thioredoxin-like domain KU053_17740 PF10411 Disulfide bond isomerase protein N-terminus KU053_17745 PF01842 ACT domain KU053_17745 PF00742 Homoserine dehydrogenase KU053_17745 PF03447 Homoserine dehydrogenase, NAD binding domain KU053_17750 PF00291 Pyridoxal-phosphate dependent enzyme KU053_17755 PF00768 D-alanyl-D-alanine carboxypeptidase KU053_17760 PF00196 Bacterial regulatory proteins, luxR family KU053_17760 PF00072 Response regulator receiver domain KU053_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU053_17765 PF00512 His Kinase A (phospho-acceptor) domain KU053_17770 PF00072 Response regulator receiver domain KU053_17770 PF02954 Bacterial regulatory protein, Fis family KU053_17770 PF00158 Sigma-54 interaction domain KU053_17775 PF00595 PDZ domain KU053_17775 PF03572 Peptidase family S41 KU053_17780 PF01676 Metalloenzyme superfamily KU053_17780 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KU053_17785 PF03739 Lipopolysaccharide export system permease LptF/LptG KU053_17795 PF00883 Cytosol aminopeptidase family, catalytic domain KU053_17795 PF02789 Cytosol aminopeptidase family, N-terminal domain KU053_17815 PF00677 Lumazine binding domain KU053_17825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU053_17825 PF01872 RibD C-terminal domain KU053_17830 PF03477 ATP cone domain KU053_17835 PF00909 Ammonium Transporter Family KU053_17840 PF00543 Nitrogen regulatory protein P-II KU053_17850 PF01078 Magnesium chelatase, subunit ChlI KU053_17850 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU053_17860 PF01636 Phosphotransferase enzyme family KU053_17865 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KU053_17885 PF02909 Tetracyclin repressor-like, C-terminal domain KU053_17885 PF00440 Bacterial regulatory proteins, tetR family KU053_17890 PF07690 Major Facilitator Superfamily KU053_17900 PF00916 Sulfate permease family KU053_17900 PF01740 STAS domain KU053_17905 PF00582 Universal stress protein family KU053_17935 PF00665 Integrase core domain KU053_17945 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU053_17945 PF01078 Magnesium chelatase, subunit ChlI KU053_17950 PF00155 Aminotransferase class I and II KU053_17950 PF00392 Bacterial regulatory proteins, gntR family KU053_17960 PF00701 Dihydrodipicolinate synthetase family KU053_17970 PF03573 outer membrane porin, OprD family KU053_17975 PF00719 Inorganic pyrophosphatase KU053_17990 PF00501 AMP-binding enzyme KU053_17990 PF13193 AMP-binding enzyme C-terminal domain KU053_17995 PF03989 DNA gyrase C-terminal domain, beta-propeller KU053_17995 PF00521 DNA gyrase/topoisomerase IV, subunit A KU053_18000 PF07690 Major Facilitator Superfamily KU053_18005 PF03458 UPF0126 domain KU053_18010 PF02810 SEC-C motif KU053_18015 PF03471 Transporter associated domain KU053_18015 PF03741 Integral membrane protein TerC family KU053_18020 PF03641 Possible lysine decarboxylase KU053_18025 PF07690 Major Facilitator Superfamily KU053_18035 PF00817 impB/mucB/samB family KU053_18035 PF11799 impB/mucB/samB family C-terminal domain KU053_18035 PF11798 IMS family HHH motif KU053_18050 PF11842 Domain of unknown function (DUF3362) KU053_18050 PF04055 Radical SAM superfamily KU053_18050 PF08497 Radical SAM N-terminal KU053_18070 PF03358 NADPH-dependent FMN reductase KU053_18080 PF00291 Pyridoxal-phosphate dependent enzyme KU053_18115 PF00440 Bacterial regulatory proteins, tetR family KU053_18140 PF01327 Polypeptide deformylase KU053_18150 PF17782 DprA winged helix domain KU053_18150 PF02481 DNA recombination-mediator protein A KU053_18155 PF01300 Telomere recombination KU053_18160 PF00892 EamA-like transporter family KU053_18165 PF00440 Bacterial regulatory proteins, tetR family KU053_18170 PF07690 Major Facilitator Superfamily KU053_18180 PF00255 Glutathione peroxidase KU053_18190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KU053_18195 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU053_18195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU053_18200 PF00231 ATP synthase KU053_18205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU053_18205 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU053_18205 PF00306 ATP synthase alpha/beta chain, C terminal domain KU053_18210 PF00213 ATP synthase delta (OSCP) subunit KU053_18215 PF00430 ATP synthase B/B' CF(0) KU053_18220 PF00137 ATP synthase subunit C KU053_18225 PF00119 ATP synthase A chain KU053_18245 PF00005 ABC transporter KU053_18250 PF00950 ABC 3 transport family KU053_18255 PF01810 LysE type translocator KU053_18260 PF04261 Dyp-type peroxidase family KU053_18270 PF00390 Malic enzyme, N-terminal domain KU053_18270 PF03949 Malic enzyme, NAD binding domain KU053_18275 PF03485 Arginyl tRNA synthetase N terminal domain KU053_18275 PF05746 DALR anticodon binding domain KU053_18275 PF00750 tRNA synthetases class I (R) KU053_18295 PF02678 Pirin KU053_18295 PF05726 Pirin C-terminal cupin domain KU053_18305 PF03551 Transcriptional regulator PadR-like family KU053_18310 PF13427 Domain of unknown function (DUF4111) KU053_18310 PF01909 Nucleotidyltransferase domain KU053_18315 PF00117 Glutamine amidotransferase class-I KU053_18315 PF00958 GMP synthase C terminal domain KU053_18315 PF02540 NAD synthase KU053_18320 PF04286 Protein of unknown function (DUF445) KU053_18325 PF07681 DoxX KU053_18330 PF09335 SNARE associated Golgi protein KU053_18345 PF13614 AAA domain KU053_18355 PF01722 BolA-like protein KU053_18370 PF01648 4'-phosphopantetheinyl transferase superfamily KU053_18375 PF12697 Alpha/beta hydrolase family KU053_18395 PF16197 Ketoacyl-synthetase C-terminal extension KU053_18395 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_18395 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_18395 PF00550 Phosphopantetheine attachment site KU053_18395 PF08242 Methyltransferase domain KU053_18395 PF00975 Thioesterase domain KU053_18395 PF14765 Polyketide synthase dehydratase KU053_18400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_18400 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_18400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_18405 PF00501 AMP-binding enzyme KU053_18410 PF03472 Autoinducer binding domain KU053_18410 PF00196 Bacterial regulatory proteins, luxR family KU053_18420 PF00765 Autoinducer synthase KU053_18425 PF00083 Sugar (and other) transporter KU053_18425 PF07690 Major Facilitator Superfamily KU053_18430 PF00378 Enoyl-CoA hydratase/isomerase KU053_18435 PF00378 Enoyl-CoA hydratase/isomerase KU053_18440 PF02770 Acyl-CoA dehydrogenase, middle domain KU053_18440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU053_18440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU053_18445 PF00501 AMP-binding enzyme KU053_18445 PF13193 AMP-binding enzyme C-terminal domain KU053_18450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU053_18450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU053_18455 PF00171 Aldehyde dehydrogenase family KU053_18465 PF00324 Amino acid permease KU053_18470 PF00324 Amino acid permease KU053_18475 PF01042 Endoribonuclease L-PSP KU053_18480 PF00842 Alanine racemase, C-terminal domain KU053_18480 PF01168 Alanine racemase, N-terminal domain KU053_18485 PF01266 FAD dependent oxidoreductase KU053_18490 PF01037 Lrp/AsnC ligand binding domain KU053_18500 PF00593 TonB dependent receptor KU053_18500 PF07715 TonB-dependent Receptor Plug Domain KU053_18515 PF00849 RNA pseudouridylate synthase KU053_18530 PF00440 Bacterial regulatory proteins, tetR family KU053_18530 PF08361 MAATS-type transcriptional repressor, C-terminal region KU053_18540 PF00109 Beta-ketoacyl synthase, N-terminal domain KU053_18540 PF02801 Beta-ketoacyl synthase, C-terminal domain KU053_18575 PF00694 Aconitase C-terminal domain KU053_18575 PF00330 Aconitase family (aconitate hydratase) KU053_18580 PF00285 Citrate synthase, C-terminal domain KU053_18590 PF00392 Bacterial regulatory proteins, gntR family KU053_18590 PF07729 FCD domain KU053_18600 PF00155 Aminotransferase class I and II KU053_18605 PF09330 D-lactate dehydrogenase, membrane binding KU053_18605 PF01565 FAD binding domain KU053_18610 PF01070 FMN-dependent dehydrogenase KU053_18615 PF07729 FCD domain KU053_18615 PF00392 Bacterial regulatory proteins, gntR family KU053_18620 PF02652 L-lactate permease KU053_18625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU053_18625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU053_18625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU053_18625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU053_18635 PF16363 GDP-mannose 4,6 dehydratase KU053_18640 PF00342 Phosphoglucose isomerase KU053_18645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU053_18645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU053_18645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU053_18650 PF00483 Nucleotidyl transferase KU053_18655 PF02397 Bacterial sugar transferase KU053_18660 PF00535 Glycosyl transferase family 2 KU053_18665 PF00534 Glycosyl transferases group 1 KU053_18675 PF00535 Glycosyl transferase family 2 KU053_18685 PF00534 Glycosyl transferases group 1 KU053_18685 PF13439 Glycosyltransferase Family 4 KU053_18695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU053_18700 PF00132 Bacterial transferase hexapeptide (six repeats) KU053_18705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KU053_18705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KU053_18710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU053_18710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU053_18710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU053_18715 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KU053_18715 PF10531 SLBB domain KU053_18715 PF02563 Polysaccharide biosynthesis/export protein KU053_18720 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU053_18725 PF02706 Chain length determinant protein KU053_18725 PF13807 G-rich domain on putative tyrosine kinase KU053_18725 PF13614 AAA domain KU053_18730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_18730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU053_18735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_18735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU053_18740 PF03023 Lipid II flippase MurJ KU053_18745 PF01510 N-acetylmuramoyl-L-alanine amidase KU053_18750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KU053_18750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KU053_18760 PF04185 Phosphoesterase family KU053_18760 PF05506 Domain of unknown function (DUF756) KU053_18765 PF03725 3' exoribonuclease family, domain 2 KU053_18765 PF01138 3' exoribonuclease family, domain 1 KU053_18770 PF00487 Fatty acid desaturase KU053_18775 PF00175 Oxidoreductase NAD-binding domain KU053_18780 PF00440 Bacterial regulatory proteins, tetR family KU053_18785 PF08360 QacR-like protein, C-terminal region KU053_18785 PF00440 Bacterial regulatory proteins, tetR family KU053_18790 PF01323 DSBA-like thioredoxin domain KU053_18800 PF13419 Haloacid dehalogenase-like hydrolase KU053_18805 PF00106 short chain dehydrogenase KU053_18820 PF00583 Acetyltransferase (GNAT) family KU053_18820 PF00696 Amino acid kinase family KU053_18825 PF09084 NMT1/THI5 like KU053_18830 PF09084 NMT1/THI5 like KU053_18835 PF00296 Luciferase-like monooxygenase KU053_18840 PF00528 Binding-protein-dependent transport system inner membrane component KU053_18845 PF00005 ABC transporter KU053_18850 PF08362 YcdC-like protein, C-terminal region KU053_18850 PF00440 Bacterial regulatory proteins, tetR family KU053_18855 PF01048 Phosphorylase superfamily KU053_18865 PF01687 Riboflavin kinase KU053_18865 PF06574 FAD synthetase KU053_18870 PF06827 Zinc finger found in FPG and IleRS KU053_18870 PF00133 tRNA synthetases class I (I, L, M and V) KU053_18870 PF08264 Anticodon-binding domain of tRNA KU053_18875 PF01252 Signal peptidase (SPase) II KU053_18880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU053_18920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU053_18925 PF07859 alpha/beta hydrolase fold KU053_18950 PF01025 GrpE KU053_18955 PF00012 Hsp70 protein KU053_18975 PF13406 Transglycosylase SLT domain KU053_18980 PF02222 ATP-grasp domain KU053_18980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KU053_18985 PF00731 AIR carboxylase KU053_18995 PF01225 Mur ligase family, catalytic domain KU053_18995 PF08245 Mur ligase middle domain KU053_18995 PF02875 Mur ligase family, glutamate ligase domain KU053_19005 PF01569 PAP2 superfamily KU053_19010 PF03741 Integral membrane protein TerC family KU053_19020 PF03738 Glutathionylspermidine synthase preATP-grasp KU053_19025 PF00355 Rieske [2Fe-2S] domain KU053_19030 PF01979 Amidohydrolase family KU053_19035 PF00156 Phosphoribosyl transferase domain KU053_19045 PF10411 Disulfide bond isomerase protein N-terminus KU053_19045 PF13098 Thioredoxin-like domain KU053_19050 PF01545 Cation efflux family KU053_19050 PF16916 Dimerisation domain of Zinc Transporter KU053_19055 PF02583 Metal-sensitive transcriptional repressor KU053_19060 PF10396 GTP-binding protein TrmE N-terminus KU053_19060 PF01926 50S ribosome-binding GTPase KU053_19060 PF12631 MnmE helical domain KU053_19065 PF14849 YidC periplasmic domain KU053_19065 PF02096 60Kd inner membrane protein KU053_19070 PF01809 Putative membrane protein insertion efficiency factor KU053_19075 PF00825 Ribonuclease P KU053_19080 PF00468 Ribosomal protein L34 KU053_19210 PF00005 ABC transporter KU053_19210 PF09383 NIL domain KU053_19230 PF02559 CarD-like/TRCF domain KU053_19230 PF00271 Helicase conserved C-terminal domain KU053_19230 PF00270 DEAD/DEAH box helicase KU053_19230 PF17757 UvrB interaction domain KU053_19230 PF03461 TRCF domain KU053_19245 PF04650 YSIRK type signal peptide KU053_19245 PF02216 B domain KU053_19245 PF00746 LPXTG cell wall anchor motif KU053_19245 PF01476 LysM domain KU053_19245 PF03373 Octapeptide repeat KU053_19310 PF00107 Zinc-binding dehydrogenase KU053_19310 PF08240 Alcohol dehydrogenase GroES-like domain KU053_19310 PF13823 Alcohol dehydrogenase GroES-associated KU053_19325 PF02583 Metal-sensitive transcriptional repressor KU053_19330 PF08240 Alcohol dehydrogenase GroES-like domain KU053_19330 PF00107 Zinc-binding dehydrogenase KU053_19335 PF00756 Putative esterase KU053_19345 PF00465 Iron-containing alcohol dehydrogenase KU053_19355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU053_19365 PF00440 Bacterial regulatory proteins, tetR family KU053_19365 PF16925 Tetracyclin repressor-like, C-terminal domain KU053_19375 PF00107 Zinc-binding dehydrogenase KU053_19375 PF16884 N-terminal domain of oxidoreductase KU053_19380 PF13737 Transposase DDE domain KU053_19415 PF00929 Exonuclease KU053_19455 PF00268 Ribonucleotide reductase, small chain KU053_19460 PF03477 ATP cone domain KU053_19460 PF02867 Ribonucleotide reductase, barrel domain KU053_19460 PF00317 Ribonucleotide reductase, all-alpha domain KU053_19480 PF02463 RecF/RecN/SMC N terminal domain KU053_19480 PF06470 SMC proteins Flexible Hinge Domain KU053_19505 PF00154 recA bacterial DNA recombination protein KU053_19505 PF03161 LAGLIDADG DNA endonuclease family KU053_19510 PF01367 5'-3' exonuclease, C-terminal SAM fold KU053_19510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU053_19510 PF00476 DNA polymerase family A KU053_19510 PF01612 3'-5' exonuclease KU053_19525 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU053_19525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU053_19525 PF14579 Helix-hairpin-helix motif KU053_19525 PF02811 PHP domain KU053_19535 PF02811 PHP domain KU053_19535 PF14579 Helix-hairpin-helix motif KU053_19535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU053_19535 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU053_19570 PF02899 Phage integrase, N-terminal SAM-like domain KU053_19570 PF00589 Phage integrase family KU053_19580 PF07015 VirC1 protein KU053_19595 PF00625 Guanylate kinase KU053_19625 PF10410 DnaB-helicase binding domain of primase KU053_19625 PF08275 DNA primase catalytic core, N-terminal domain KU053_19625 PF01807 CHC2 zinc finger