locus-tag class description KU204_00005 PF00308 Bacterial dnaA protein KU204_00005 PF08299 Bacterial dnaA protein helix-turn-helix KU204_00005 PF11638 DnaA N-terminal domain KU204_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KU204_00010 PF02767 DNA polymerase III beta subunit, central domain KU204_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KU204_00015 PF02463 RecF/RecN/SMC N terminal domain KU204_00020 PF00204 DNA gyrase B KU204_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KU204_00020 PF18053 DNA gyrase B subunit insert domain KU204_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_00020 PF01751 Toprim domain KU204_00030 PF09335 SNARE associated Golgi protein KU204_00035 PF12848 ABC transporter KU204_00035 PF00005 ABC transporter KU204_00055 PF01521 Iron-sulphur cluster biosynthesis KU204_00060 PF00561 alpha/beta hydrolase fold KU204_00065 PF03702 Anhydro-N-acetylmuramic acid kinase KU204_00070 PF00579 tRNA synthetases class I (W and Y) KU204_00110 PF00209 Sodium:neurotransmitter symporter family KU204_00120 PF01189 16S rRNA methyltransferase RsmB/F KU204_00120 PF01029 NusB family KU204_00125 PF02911 Formyl transferase, C-terminal domain KU204_00125 PF00551 Formyl transferase KU204_00130 PF00920 Dehydratase family KU204_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_00145 PF03466 LysR substrate binding domain KU204_00150 PF00860 Permease family KU204_00155 PF00311 Phosphoenolpyruvate carboxylase KU204_00160 PF00440 Bacterial regulatory proteins, tetR family KU204_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region KU204_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_00170 PF00873 AcrB/AcrD/AcrF family KU204_00180 PF01556 DnaJ C terminal domain KU204_00180 PF00684 DnaJ central domain KU204_00180 PF00226 DnaJ domain KU204_00190 PF01113 Dihydrodipicolinate reductase, N-terminus KU204_00190 PF05173 Dihydrodipicolinate reductase, C-terminus KU204_00200 PF07690 Major Facilitator Superfamily KU204_00205 PF00248 Aldo/keto reductase family KU204_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_00210 PF03466 LysR substrate binding domain KU204_00225 PF00392 Bacterial regulatory proteins, gntR family KU204_00225 PF00155 Aminotransferase class I and II KU204_00230 PF00107 Zinc-binding dehydrogenase KU204_00230 PF08240 Alcohol dehydrogenase GroES-like domain KU204_00235 PF03352 Methyladenine glycosylase KU204_00250 PF10576 Iron-sulfur binding domain of endonuclease III KU204_00250 PF00633 Helix-hairpin-helix motif KU204_00250 PF14815 NUDIX domain KU204_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein KU204_00265 PF07043 Protein of unknown function (DUF1328) KU204_00270 PF03692 Putative zinc- or iron-chelating domain KU204_00275 PF07995 Glucose / Sorbosone dehydrogenase KU204_00280 PF00004 ATPase family associated with various cellular activities (AAA) KU204_00280 PF16193 AAA C-terminal domain KU204_00280 PF12002 MgsA AAA+ ATPase C terminal KU204_00285 PF01226 Formate/nitrite transporter KU204_00295 PF01259 SAICAR synthetase KU204_00305 PF00701 Dihydrodipicolinate synthetase family KU204_00310 PF00857 Isochorismatase family KU204_00315 PF01758 Sodium Bile acid symporter family KU204_00320 PF01554 MatE KU204_00325 PF04463 Protein of unknown function (DUF523) KU204_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU204_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU204_00345 PF02798 Glutathione S-transferase, N-terminal domain KU204_00345 PF14497 Glutathione S-transferase, C-terminal domain KU204_00355 PF00324 Amino acid permease KU204_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU204_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU204_00375 PF07702 UTRA domain KU204_00375 PF00392 Bacterial regulatory proteins, gntR family KU204_00380 PF05962 HutD KU204_00385 PF17392 Urocanase C-terminal domain KU204_00385 PF01175 Urocanase Rossmann-like domain KU204_00385 PF17391 Urocanase N-terminal domain KU204_00390 PF00221 Aromatic amino acid lyase KU204_00395 PF00324 Amino acid permease KU204_00400 PF01979 Amidohydrolase family KU204_00405 PF00491 Arginase family KU204_00420 PF01177 Asp/Glu/Hydantoin racemase KU204_00425 PF01380 SIS domain KU204_00430 PF14602 Hexapeptide repeat of succinyl-transferase KU204_00430 PF12804 MobA-like NTP transferase domain KU204_00430 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_00435 PF04608 Phosphatidylglycerophosphatase A KU204_00440 PF00586 AIR synthase related protein, N-terminal domain KU204_00440 PF02769 AIR synthase related protein, C-terminal domain KU204_00445 PF01029 NusB family KU204_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase KU204_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU204_00455 PF00925 GTP cyclohydrolase II KU204_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase KU204_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KU204_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU204_00490 PF00581 Rhodanese-like domain KU204_00495 PF02666 Phosphatidylserine decarboxylase KU204_00500 PF03069 Acetamidase/Formamidase family KU204_00520 PF11808 Phosphate regulon sensor protein PhoR KU204_00520 PF00989 PAS fold KU204_00520 PF00512 His Kinase A (phospho-acceptor) domain KU204_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_00525 PF00486 Transcriptional regulatory protein, C terminal KU204_00525 PF00072 Response regulator receiver domain KU204_00535 PF00106 short chain dehydrogenase KU204_00540 PF01554 MatE KU204_00545 PF00155 Aminotransferase class I and II KU204_00550 PF04286 Protein of unknown function (DUF445) KU204_00565 PF04262 Glutamate-cysteine ligase KU204_00570 PF02600 Disulfide bond formation protein DsbB KU204_00575 PF04717 Type VI secretion system, phage-baseplate injector KU204_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU204_00575 PF13296 Putative type VI secretion system Rhs element Vgr KU204_00580 PF01476 LysM domain KU204_00580 PF00877 NlpC/P60 family KU204_00595 PF05728 Uncharacterised protein family (UPF0227) KU204_00600 PF01751 Toprim domain KU204_00600 PF00986 DNA gyrase B subunit, carboxyl terminus KU204_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_00600 PF00204 DNA gyrase B KU204_00605 PF00106 short chain dehydrogenase KU204_00610 PF04115 Ureidoglycolate lyase KU204_00615 PF03561 Allantoicase repeat KU204_00620 PF01494 FAD binding domain KU204_00630 PF00860 Permease family KU204_00635 PF00576 HIUase/Transthyretin family KU204_00665 PF11412 Disulphide bond corrector protein DsbC KU204_00665 PF02683 Cytochrome C biogenesis protein transmembrane region KU204_00670 PF00990 Diguanylate cyclase, GGDEF domain KU204_00670 PF07694 5TMR of 5TMR-LYT KU204_00675 PF07859 alpha/beta hydrolase fold KU204_00685 PF03960 ArsC family KU204_00690 PF03372 Endonuclease/Exonuclease/phosphatase family KU204_00695 PF00156 Phosphoribosyl transferase domain KU204_00700 PF00593 TonB dependent receptor KU204_00700 PF07715 TonB-dependent Receptor Plug Domain KU204_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KU204_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KU204_00715 PF03033 Glycosyltransferase family 28 N-terminal domain KU204_00715 PF04101 Glycosyltransferase family 28 C-terminal domain KU204_00720 PF08245 Mur ligase middle domain KU204_00720 PF02875 Mur ligase family, glutamate ligase domain KU204_00720 PF01225 Mur ligase family, catalytic domain KU204_00725 PF01820 D-ala D-ala ligase N-terminus KU204_00725 PF07478 D-ala D-ala ligase C-terminus KU204_00730 PF08478 POTRA domain, FtsQ-type KU204_00730 PF03799 Cell division protein FtsQ KU204_00735 PF02491 SHS2 domain inserted in FTSA KU204_00740 PF12327 FtsZ family, C-terminal domain KU204_00740 PF00091 Tubulin/FtsZ family, GTPase domain KU204_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KU204_00755 PF01551 Peptidase family M23 KU204_00760 PF00456 Transketolase, thiamine diphosphate binding domain KU204_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain KU204_00765 PF02817 e3 binding domain KU204_00765 PF00364 Biotin-requiring enzyme KU204_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU204_00775 PF01169 Uncharacterized protein family UPF0016 KU204_00795 PF00258 Flavodoxin KU204_00795 PF01613 Flavin reductase like domain KU204_00800 PF03692 Putative zinc- or iron-chelating domain KU204_00805 PF00478 IMP dehydrogenase / GMP reductase domain KU204_00805 PF00571 CBS domain KU204_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU204_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU204_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU204_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU204_00815 PF01243 Pyridoxamine 5'-phosphate oxidase KU204_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KU204_00820 PF02272 DHHA1 domain KU204_00820 PF01368 DHH family KU204_00820 PF17768 RecJ OB domain KU204_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KU204_00850 PF04452 RNA methyltransferase KU204_00855 PF00924 Mechanosensitive ion channel KU204_00865 PF13193 AMP-binding enzyme C-terminal domain KU204_00865 PF00501 AMP-binding enzyme KU204_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus KU204_00870 PF00857 Isochorismatase family KU204_00875 PF01037 Lrp/AsnC ligand binding domain KU204_00880 PF00872 Transposase, Mutator family KU204_00885 PF00296 Luciferase-like monooxygenase KU204_00890 PF03358 NADPH-dependent FMN reductase KU204_00895 PF00196 Bacterial regulatory proteins, luxR family KU204_00895 PF00072 Response regulator receiver domain KU204_00905 PF01627 Hpt domain KU204_00905 PF00672 HAMP domain KU204_00905 PF00512 His Kinase A (phospho-acceptor) domain KU204_00905 PF00072 Response regulator receiver domain KU204_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_00910 PF04341 Protein of unknown function, DUF485 KU204_00915 PF00474 Sodium:solute symporter family KU204_00925 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_00935 PF00990 Diguanylate cyclase, GGDEF domain KU204_00945 PF00005 ABC transporter KU204_00945 PF17755 UvrA DNA-binding domain KU204_00945 PF17760 UvrA interaction domain KU204_00950 PF16925 Tetracyclin repressor-like, C-terminal domain KU204_00950 PF00440 Bacterial regulatory proteins, tetR family KU204_00955 PF08240 Alcohol dehydrogenase GroES-like domain KU204_00955 PF00107 Zinc-binding dehydrogenase KU204_00965 PF06942 GlpM protein KU204_00970 PF08543 Phosphomethylpyrimidine kinase KU204_00970 PF03070 TENA/THI-4/PQQC family KU204_00970 PF02581 Thiamine monophosphate synthase KU204_00980 PF07690 Major Facilitator Superfamily KU204_00985 PF00436 Single-strand binding protein family KU204_00995 PF03591 AzlC protein KU204_01005 PF00324 Amino acid permease KU204_01010 PF00155 Aminotransferase class I and II KU204_01010 PF00392 Bacterial regulatory proteins, gntR family KU204_01015 PF00202 Aminotransferase class-III KU204_01020 PF00171 Aldehyde dehydrogenase family KU204_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_01030 PF00857 Isochorismatase family KU204_01035 PF05726 Pirin C-terminal cupin domain KU204_01035 PF02678 Pirin KU204_01040 PF01593 Flavin containing amine oxidoreductase KU204_01060 PF07690 Major Facilitator Superfamily KU204_01065 PF03466 LysR substrate binding domain KU204_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_01085 PF00248 Aldo/keto reductase family KU204_01090 PF12833 Helix-turn-helix domain KU204_01090 PF02311 AraC-like ligand binding domain KU204_01120 PF01638 HxlR-like helix-turn-helix KU204_01125 PF02525 Flavodoxin-like fold KU204_01145 PF02705 K+ potassium transporter KU204_01170 PF00230 Major intrinsic protein KU204_01185 PF00977 Histidine biosynthesis protein KU204_01190 PF01636 Phosphotransferase enzyme family KU204_01205 PF03992 Antibiotic biosynthesis monooxygenase KU204_01220 PF00977 Histidine biosynthesis protein KU204_01235 PF00117 Glutamine amidotransferase class-I KU204_01240 PF00475 Imidazoleglycerol-phosphate dehydratase KU204_01260 PF00583 Acetyltransferase (GNAT) family KU204_01265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KU204_01265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KU204_01275 PF00512 His Kinase A (phospho-acceptor) domain KU204_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_01275 PF00672 HAMP domain KU204_01280 PF00486 Transcriptional regulatory protein, C terminal KU204_01280 PF00072 Response regulator receiver domain KU204_01285 PF09371 Tex-like protein N-terminal domain KU204_01285 PF00575 S1 RNA binding domain KU204_01285 PF17674 HHH domain KU204_01285 PF16921 Tex protein YqgF-like domain KU204_01290 PF01740 STAS domain KU204_01290 PF00916 Sulfate permease family KU204_01295 PF00106 short chain dehydrogenase KU204_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme KU204_01305 PF12848 ABC transporter KU204_01305 PF00005 ABC transporter KU204_01330 PF04191 Phospholipid methyltransferase KU204_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_01350 PF00529 HlyD membrane-fusion protein of T1SS KU204_01355 PF00873 AcrB/AcrD/AcrF family KU204_01360 PF01545 Cation efflux family KU204_01390 PF00324 Amino acid permease KU204_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU204_01420 PF01795 MraW methylase family KU204_01430 PF03717 Penicillin-binding Protein dimerisation domain KU204_01430 PF00905 Penicillin binding protein transpeptidase domain KU204_01435 PF01225 Mur ligase family, catalytic domain KU204_01435 PF02875 Mur ligase family, glutamate ligase domain KU204_01435 PF08245 Mur ligase middle domain KU204_01440 PF01225 Mur ligase family, catalytic domain KU204_01440 PF02875 Mur ligase family, glutamate ligase domain KU204_01440 PF08245 Mur ligase middle domain KU204_01445 PF00953 Glycosyl transferase family 4 KU204_01455 PF13847 Methyltransferase domain KU204_01460 PF00912 Transglycosylase KU204_01460 PF00905 Penicillin binding protein transpeptidase domain KU204_01460 PF17092 Penicillin-binding protein OB-like domain KU204_01465 PF11104 Type IV pilus assembly protein PilM; KU204_01470 PF05137 Fimbrial assembly protein (PilN) KU204_01475 PF04350 Pilus assembly protein, PilO KU204_01485 PF07660 Secretin and TonB N terminus short domain KU204_01485 PF03958 Bacterial type II/III secretion system short domain KU204_01485 PF00263 Bacterial type II and III secretion system protein KU204_01485 PF11741 AMIN domain KU204_01490 PF01202 Shikimate kinase KU204_01495 PF01761 3-dehydroquinate synthase KU204_01505 PF00310 Glutamine amidotransferases class-II KU204_01505 PF01493 GXGXG motif KU204_01505 PF04898 Glutamate synthase central domain KU204_01505 PF01645 Conserved region in glutamate synthase KU204_01510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KU204_01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_01520 PF04011 LemA family KU204_01525 PF04536 TPM domain KU204_01545 PF15864 Protein glycosylation ligase KU204_01545 PF04932 O-Antigen ligase KU204_01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal KU204_01550 PF00210 Ferritin-like domain KU204_01555 PF04324 BFD-like [2Fe-2S] binding domain KU204_01560 PF01042 Endoribonuclease L-PSP KU204_01565 PF13291 ACT domain KU204_01565 PF04607 Region found in RelA / SpoT proteins KU204_01565 PF02824 TGS domain KU204_01575 PF01192 RNA polymerase Rpb6 KU204_01580 PF00625 Guanylate kinase KU204_01585 PF02401 LytB protein KU204_01625 PF00886 Ribosomal protein S16 KU204_01630 PF01782 RimM N-terminal domain KU204_01630 PF05239 PRC-barrel domain KU204_01635 PF01746 tRNA (Guanine-1)-methyltransferase KU204_01640 PF01245 Ribosomal protein L19 KU204_01645 PF00561 alpha/beta hydrolase fold KU204_01650 PF03280 Proteobacterial lipase chaperone protein KU204_01655 PF16198 tRNA pseudouridylate synthase B C-terminal domain KU204_01655 PF09157 Pseudouridine synthase II TruB, C-terminal KU204_01655 PF01509 TruB family pseudouridylate synthase (N terminal domain) KU204_01660 PF01925 Sulfite exporter TauE/SafE KU204_01670 PF00892 EamA-like transporter family KU204_01675 PF00892 EamA-like transporter family KU204_01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU204_01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU204_01685 PF01565 FAD binding domain KU204_01685 PF02913 FAD linked oxidases, C-terminal domain KU204_01695 PF03992 Antibiotic biosynthesis monooxygenase KU204_01700 PF02525 Flavodoxin-like fold KU204_01710 PF07690 Major Facilitator Superfamily KU204_01715 PF12805 FUSC-like inner membrane protein yccS KU204_01720 PF00080 Copper/zinc superoxide dismutase (SODC) KU204_01725 PF01594 AI-2E family transporter KU204_01730 PF13614 AAA domain KU204_01760 PF00324 Amino acid permease KU204_01765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU204_01765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU204_01770 PF00202 Aminotransferase class-III KU204_01775 PF04958 Arginine N-succinyltransferase beta subunit KU204_01780 PF00171 Aldehyde dehydrogenase family KU204_01785 PF04996 Succinylarginine dihydrolase KU204_01790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KU204_01805 PF05922 Peptidase inhibitor I9 KU204_01805 PF00082 Subtilase family KU204_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_01820 PF03466 LysR substrate binding domain KU204_01825 PF00892 EamA-like transporter family KU204_01835 PF05746 DALR anticodon binding domain KU204_01835 PF02092 Glycyl-tRNA synthetase beta subunit KU204_01840 PF02091 Glycyl-tRNA synthetase alpha subunit KU204_01865 PF00571 CBS domain KU204_01870 PF04024 PspC domain KU204_01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU204_01880 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_01890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KU204_01890 PF01488 Shikimate / quinate 5-dehydrogenase KU204_01890 PF08501 Shikimate dehydrogenase substrate binding domain KU204_01895 PF01218 Coproporphyrinogen III oxidase KU204_01900 PF00925 GTP cyclohydrolase II KU204_01905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KU204_01905 PF02779 Transketolase, pyrimidine binding domain KU204_01905 PF02780 Transketolase, C-terminal domain KU204_01910 PF00459 Inositol monophosphatase family KU204_01915 PF03880 DbpA RNA binding domain KU204_01915 PF00270 DEAD/DEAH box helicase KU204_01915 PF12343 Cold shock protein DEAD box A KU204_01915 PF00271 Helicase conserved C-terminal domain KU204_01925 PF00005 ABC transporter KU204_01930 PF02405 Permease MlaE KU204_01940 PF05494 MlaC protein KU204_01950 PF01544 CorA-like Mg2+ transporter protein KU204_01955 PF03641 Possible lysine decarboxylase KU204_01960 PF00293 NUDIX domain KU204_01965 PF00156 Phosphoribosyl transferase domain KU204_01970 PF00270 DEAD/DEAH box helicase KU204_01970 PF00271 Helicase conserved C-terminal domain KU204_01970 PF17191 RecG wedge domain KU204_01985 PF01553 Acyltransferase KU204_01995 PF00375 Sodium:dicarboxylate symporter family KU204_02005 PF01926 50S ribosome-binding GTPase KU204_02010 PF02082 Transcriptional regulator KU204_02015 PF00042 Globin KU204_02015 PF00175 Oxidoreductase NAD-binding domain KU204_02015 PF00970 Oxidoreductase FAD-binding domain KU204_02020 PF05872 Bacterial protein of unknown function (DUF853) KU204_02025 PF01053 Cys/Met metabolism PLP-dependent enzyme KU204_02030 PF00117 Glutamine amidotransferase class-I KU204_02035 PF00338 Ribosomal protein S10p/S20e KU204_02040 PF00297 Ribosomal protein L3 KU204_02045 PF00573 Ribosomal protein L4/L1 family KU204_02050 PF00276 Ribosomal protein L23 KU204_02055 PF00181 Ribosomal Proteins L2, RNA binding domain KU204_02055 PF03947 Ribosomal Proteins L2, C-terminal domain KU204_02060 PF00203 Ribosomal protein S19 KU204_02065 PF00237 Ribosomal protein L22p/L17e KU204_02070 PF07650 KH domain KU204_02070 PF00189 Ribosomal protein S3, C-terminal domain KU204_02075 PF00252 Ribosomal protein L16p/L10e KU204_02080 PF00831 Ribosomal L29 protein KU204_02085 PF00366 Ribosomal protein S17 KU204_02090 PF00238 Ribosomal protein L14p/L23e KU204_02095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KU204_02095 PF00467 KOW motif KU204_02100 PF00281 Ribosomal protein L5 KU204_02100 PF00673 ribosomal L5P family C-terminus KU204_02105 PF00253 Ribosomal protein S14p/S29e KU204_02110 PF00410 Ribosomal protein S8 KU204_02115 PF00347 Ribosomal protein L6 KU204_02120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KU204_02125 PF03719 Ribosomal protein S5, C-terminal domain KU204_02125 PF00333 Ribosomal protein S5, N-terminal domain KU204_02130 PF00327 Ribosomal protein L30p/L7e KU204_02135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KU204_02140 PF00344 SecY translocase KU204_02145 PF00444 Ribosomal protein L36 KU204_02150 PF00416 Ribosomal protein S13/S18 KU204_02155 PF00411 Ribosomal protein S11 KU204_02160 PF01479 S4 domain KU204_02160 PF00163 Ribosomal protein S4/S9 N-terminal domain KU204_02165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KU204_02165 PF01000 RNA polymerase Rpb3/RpoA insert domain KU204_02165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KU204_02170 PF01196 Ribosomal protein L17 KU204_02175 PF00743 Flavin-binding monooxygenase-like KU204_02180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_02180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_02180 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_02185 PF03937 Flavinator of succinate dehydrogenase KU204_02215 PF09526 Probable metal-binding protein (DUF2387) KU204_02220 PF01432 Peptidase family M3 KU204_02225 PF00773 RNB domain KU204_02225 PF08206 Ribonuclease B OB domain KU204_02225 PF08461 Ribonuclease R winged-helix domain KU204_02225 PF00575 S1 RNA binding domain KU204_02225 PF17876 Cold shock domain KU204_02270 PF01557 Fumarylacetoacetate (FAA) hydrolase family KU204_02275 PF12833 Helix-turn-helix domain KU204_02280 PF00892 EamA-like transporter family KU204_02285 PF03631 Virulence factor BrkB KU204_02290 PF03358 NADPH-dependent FMN reductase KU204_02315 PF02130 Uncharacterized protein family UPF0054 KU204_02320 PF02562 PhoH-like protein KU204_02325 PF01938 TRAM domain KU204_02325 PF04055 Radical SAM superfamily KU204_02325 PF00919 Uncharacterized protein family UPF0004 KU204_02330 PF10145 Phage-related minor tail protein KU204_02330 PF01464 Transglycosylase SLT domain KU204_02330 PF01551 Peptidase family M23 KU204_02340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KU204_02340 PF00056 lactate/malate dehydrogenase, NAD binding domain KU204_02360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KU204_02365 PF01066 CDP-alcohol phosphatidyltransferase KU204_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_02410 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_02415 PF17932 Tetracyclin repressor-like, C-terminal domain KU204_02415 PF00440 Bacterial regulatory proteins, tetR family KU204_02430 PF01039 Carboxyl transferase domain KU204_02435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_02435 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_02435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_02445 PF02785 Biotin carboxylase C-terminal domain KU204_02445 PF00289 Biotin carboxylase, N-terminal domain KU204_02445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_02445 PF00364 Biotin-requiring enzyme KU204_02455 PF04386 Stringent starvation protein B KU204_02460 PF13417 Glutathione S-transferase, N-terminal domain KU204_02460 PF00043 Glutathione S-transferase, C-terminal domain KU204_02465 PF00380 Ribosomal protein S9/S16 KU204_02470 PF00572 Ribosomal protein L13 KU204_02475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KU204_02480 PF00398 Ribosomal RNA adenine dimethylase KU204_02485 PF00149 Calcineurin-like phosphoesterase KU204_02505 PF16360 GTP-binding GTPase Middle Region KU204_02505 PF13167 GTP-binding GTPase N-terminal KU204_02505 PF01926 50S ribosome-binding GTPase KU204_02515 PF13091 PLD-like domain KU204_02520 PF00149 Calcineurin-like phosphoesterase KU204_02520 PF10518 TAT (twin-arginine translocation) pathway signal sequence KU204_02525 PF00691 OmpA family KU204_02525 PF01389 OmpA-like transmembrane domain KU204_02530 PF17152 Periplasmic sensor domain KU204_02530 PF00990 Diguanylate cyclase, GGDEF domain KU204_02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU204_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_02575 PF04273 Putative phosphatase (DUF442) KU204_02575 PF00753 Metallo-beta-lactamase superfamily KU204_02580 PF00561 alpha/beta hydrolase fold KU204_02585 PF00085 Thioredoxin KU204_02590 PF03061 Thioesterase superfamily KU204_02600 PF04461 Protein of unknown function (DUF520) KU204_02610 PF01266 FAD dependent oxidoreductase KU204_02610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU204_02620 PF03795 YCII-related domain KU204_02625 PF04279 Intracellular septation protein A KU204_02630 PF02811 PHP domain KU204_02635 PF01062 Bestrophin, RFP-TM, chloride channel KU204_02640 PF04002 RadC-like JAB domain KU204_02645 PF04127 DNA / pantothenate metabolism flavoprotein KU204_02645 PF02441 Flavoprotein KU204_02650 PF07549 SecD/SecF GG Motif KU204_02650 PF02355 Protein export membrane protein KU204_02655 PF07549 SecD/SecF GG Motif KU204_02655 PF13721 SecD export protein N-terminal TM region KU204_02655 PF02355 Protein export membrane protein KU204_02660 PF02699 Preprotein translocase subunit KU204_02665 PF01702 Queuine tRNA-ribosyltransferase KU204_02680 PF02547 Queuosine biosynthesis protein KU204_02690 PF07689 KaiB domain KU204_02690 PF00512 His Kinase A (phospho-acceptor) domain KU204_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_02695 PF03710 Glutamate-ammonia ligase adenylyltransferase KU204_02695 PF08335 GlnD PII-uridylyltransferase KU204_02700 PF01063 Amino-transferase class IV KU204_02715 PF01522 Polysaccharide deacetylase KU204_02720 PF00535 Glycosyl transferase family 2 KU204_02725 PF13439 Glycosyltransferase Family 4 KU204_02725 PF00534 Glycosyl transferases group 1 KU204_02750 PF11380 Stealth protein CR2, conserved region 2 KU204_02750 PF17102 Stealth protein CR3, conserved region 3 KU204_02750 PF17101 Stealth protein CR1, conserved region 1 KU204_02755 PF01336 OB-fold nucleic acid binding domain KU204_02755 PF00152 tRNA synthetases class II (D, K and N) KU204_02755 PF02938 GAD domain KU204_02765 PF00593 TonB dependent receptor KU204_02765 PF07715 TonB-dependent Receptor Plug Domain KU204_02785 PF06146 Phosphate-starvation-inducible E KU204_02790 PF00043 Glutathione S-transferase, C-terminal domain KU204_02790 PF02798 Glutathione S-transferase, N-terminal domain KU204_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_02795 PF03466 LysR substrate binding domain KU204_02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU204_02800 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_02805 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU204_02815 PF00672 HAMP domain KU204_02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_02815 PF00512 His Kinase A (phospho-acceptor) domain KU204_02820 PF00072 Response regulator receiver domain KU204_02820 PF00486 Transcriptional regulatory protein, C terminal KU204_02825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KU204_02845 PF01923 Cobalamin adenosyltransferase KU204_02850 PF07715 TonB-dependent Receptor Plug Domain KU204_02850 PF00593 TonB dependent receptor KU204_02855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KU204_02860 PF00291 Pyridoxal-phosphate dependent enzyme KU204_02885 PF00290 Tryptophan synthase alpha chain KU204_02890 PF01039 Carboxyl transferase domain KU204_02895 PF02875 Mur ligase family, glutamate ligase domain KU204_02895 PF08245 Mur ligase middle domain KU204_02910 PF00753 Metallo-beta-lactamase superfamily KU204_02915 PF00578 AhpC/TSA family KU204_02915 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU204_02920 PF07516 SecA Wing and Scaffold domain KU204_02920 PF01043 SecA preprotein cross-linking domain KU204_02920 PF07517 SecA DEAD-like domain KU204_02920 PF02810 SEC-C motif KU204_02930 PF00083 Sugar (and other) transporter KU204_02930 PF07690 Major Facilitator Superfamily KU204_02935 PF03006 Haemolysin-III related KU204_02960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU204_02960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU204_02960 PF00378 Enoyl-CoA hydratase/isomerase KU204_02965 PF02803 Thiolase, C-terminal domain KU204_02965 PF00108 Thiolase, N-terminal domain KU204_02970 PF02311 AraC-like ligand binding domain KU204_02970 PF12833 Helix-turn-helix domain KU204_02975 PF02515 CoA-transferase family III KU204_02980 PF04966 Carbohydrate-selective porin, OprB family KU204_02985 PF01011 PQQ enzyme repeat KU204_02990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU204_02990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU204_03000 PF00893 Small Multidrug Resistance protein KU204_03010 PF02803 Thiolase, C-terminal domain KU204_03010 PF00108 Thiolase, N-terminal domain KU204_03020 PF13505 Outer membrane protein beta-barrel domain KU204_03020 PF00691 OmpA family KU204_03030 PF01139 tRNA-splicing ligase RtcB KU204_03035 PF00324 Amino acid permease KU204_03040 PF08468 Methyltransferase small domain N-terminal KU204_03040 PF05175 Methyltransferase small domain KU204_03045 PF00860 Permease family KU204_03050 PF00679 Elongation factor G C-terminus KU204_03050 PF03144 Elongation factor Tu domain 2 KU204_03050 PF00009 Elongation factor Tu GTP binding domain KU204_03055 PF01741 Large-conductance mechanosensitive channel, MscL KU204_03070 PF06827 Zinc finger found in FPG and IleRS KU204_03070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KU204_03070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KU204_03075 PF02245 Methylpurine-DNA glycosylase (MPG) KU204_03080 PF00593 TonB dependent receptor KU204_03080 PF07715 TonB-dependent Receptor Plug Domain KU204_03095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_03110 PF13098 Thioredoxin-like domain KU204_03110 PF10411 Disulfide bond isomerase protein N-terminus KU204_03115 PF01571 Aminomethyltransferase folate-binding domain KU204_03125 PF04343 Protein of unknown function, DUF488 KU204_03130 PF03831 PhnA domain KU204_03130 PF08274 PhnA Zinc-Ribbon KU204_03135 PF07411 Domain of unknown function (DUF1508) KU204_03140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU204_03140 PF04073 Aminoacyl-tRNA editing domain KU204_03140 PF03129 Anticodon binding domain KU204_03145 PF00873 AcrB/AcrD/AcrF family KU204_03160 PF00072 Response regulator receiver domain KU204_03165 PF00072 Response regulator receiver domain KU204_03170 PF01584 CheW-like domain KU204_03175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KU204_03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU204_03180 PF01584 CheW-like domain KU204_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_03180 PF01627 Hpt domain KU204_03180 PF00072 Response regulator receiver domain KU204_03190 PF01546 Peptidase family M20/M25/M40 KU204_03190 PF07687 Peptidase dimerisation domain KU204_03195 PF08085 Entericidin EcnA/B family KU204_03205 PF04304 Protein of unknown function (DUF454) KU204_03210 PF03734 L,D-transpeptidase catalytic domain KU204_03210 PF17969 L,D-transpeptidase C-terminal domain KU204_03250 PF00175 Oxidoreductase NAD-binding domain KU204_03250 PF00258 Flavodoxin KU204_03250 PF00667 FAD binding domain KU204_03260 PF12805 FUSC-like inner membrane protein yccS KU204_03265 PF07690 Major Facilitator Superfamily KU204_03270 PF00881 Nitroreductase family KU204_03285 PF01235 Sodium:alanine symporter family KU204_03290 PF01734 Patatin-like phospholipase KU204_03295 PF13291 ACT domain KU204_03295 PF00291 Pyridoxal-phosphate dependent enzyme KU204_03300 PF05992 SbmA/BacA-like family KU204_03340 PF02637 GatB domain KU204_03340 PF02934 GatB/GatE catalytic domain KU204_03345 PF01425 Amidase KU204_03350 PF02686 Glu-tRNAGln amidotransferase C subunit KU204_03360 PF04085 rod shape-determining protein MreC KU204_03365 PF04093 rod shape-determining protein MreD KU204_03370 PF02545 Maf-like protein KU204_03375 PF00575 S1 RNA binding domain KU204_03375 PF10150 Ribonuclease E/G family KU204_03385 PF06974 Protein of unknown function (DUF1298) KU204_03385 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KU204_03390 PF01507 Phosphoadenosine phosphosulfate reductase family KU204_03405 PF02525 Flavodoxin-like fold KU204_03425 PF02673 Bacitracin resistance protein BacA KU204_03430 PF12833 Helix-turn-helix domain KU204_03430 PF06719 AraC-type transcriptional regulator N-terminus KU204_03435 PF08240 Alcohol dehydrogenase GroES-like domain KU204_03435 PF08990 Erythronolide synthase docking KU204_03435 PF00550 Phosphopantetheine attachment site KU204_03435 PF08659 KR domain KU204_03435 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_03435 PF14765 Polyketide synthase dehydratase KU204_03435 PF16197 Ketoacyl-synthetase C-terminal extension KU204_03435 PF09277 Erythronolide synthase, docking KU204_03435 PF00698 Acyl transferase domain KU204_03435 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_03440 PF01965 DJ-1/PfpI family KU204_03450 PF00324 Amino acid permease KU204_03455 PF04303 PrpF protein KU204_03460 PF00348 Polyprenyl synthetase KU204_03465 PF04237 YjbR KU204_03470 PF01145 SPFH domain / Band 7 family KU204_03480 PF01734 Patatin-like phospholipase KU204_03500 PF08019 Phosphoethanolamine transferase EptA/EptB KU204_03500 PF00884 Sulfatase KU204_03505 PF00072 Response regulator receiver domain KU204_03505 PF00486 Transcriptional regulatory protein, C terminal KU204_03510 PF00512 His Kinase A (phospho-acceptor) domain KU204_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_03510 PF08521 Two-component sensor kinase N-terminal KU204_03520 PF00909 Ammonium Transporter Family KU204_03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_03525 PF03466 LysR substrate binding domain KU204_03545 PF08264 Anticodon-binding domain of tRNA KU204_03545 PF10458 Valyl tRNA synthetase tRNA binding arm KU204_03545 PF00133 tRNA synthetases class I (I, L, M and V) KU204_03565 PF01906 Putative heavy-metal-binding KU204_03570 PF01906 Putative heavy-metal-binding KU204_03575 PF02321 Outer membrane efflux protein KU204_03580 PF00873 AcrB/AcrD/AcrF family KU204_03585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_03585 PF00529 HlyD membrane-fusion protein of T1SS KU204_03590 PF01569 PAP2 superfamily KU204_03600 PF00348 Polyprenyl synthetase KU204_03610 PF00829 Ribosomal prokaryotic L21 protein KU204_03615 PF01016 Ribosomal L27 protein KU204_03620 PF03548 Outer membrane lipoprotein carrier protein LolA KU204_03630 PF02403 Seryl-tRNA synthetase N-terminal domain KU204_03630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU204_03635 PF10414 Sirohaem synthase dimerisation region KU204_03635 PF14824 Sirohaem biosynthesis protein central KU204_03635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU204_03640 PF00588 SpoU rRNA Methylase family KU204_03645 PF01638 HxlR-like helix-turn-helix KU204_03650 PF03358 NADPH-dependent FMN reductase KU204_03655 PF13520 Amino acid permease KU204_03660 PF00465 Iron-containing alcohol dehydrogenase KU204_03670 PF03099 Biotin/lipoate A/B protein ligase family KU204_03675 PF04359 Protein of unknown function (DUF493) KU204_03680 PF04545 Sigma-70, region 4 KU204_03680 PF04539 Sigma-70 region 3 KU204_03680 PF04542 Sigma-70 region 2 KU204_03680 PF00140 Sigma-70 factor, region 1.2 KU204_03680 PF03979 Sigma-70 factor, region 1.1 KU204_03680 PF04546 Sigma-70, non-essential region KU204_03700 PF17773 UPF0176 acylphosphatase like domain KU204_03700 PF00581 Rhodanese-like domain KU204_03710 PF00285 Citrate synthase, C-terminal domain KU204_03715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU204_03720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU204_03725 PF02910 Fumarate reductase flavoprotein C-term KU204_03725 PF00890 FAD binding domain KU204_03730 PF13085 2Fe-2S iron-sulfur cluster binding domain KU204_03745 PF16078 2-oxoglutarate dehydrogenase N-terminus KU204_03745 PF00676 Dehydrogenase E1 component KU204_03745 PF16870 2-oxoglutarate dehydrogenase C-terminal KU204_03745 PF02779 Transketolase, pyrimidine binding domain KU204_03750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU204_03750 PF00364 Biotin-requiring enzyme KU204_03750 PF02817 e3 binding domain KU204_03755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_03755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU204_03760 PF08442 ATP-grasp domain KU204_03760 PF00549 CoA-ligase KU204_03765 PF02629 CoA binding domain KU204_03765 PF00549 CoA-ligase KU204_03770 PF00579 tRNA synthetases class I (W and Y) KU204_03775 PF05661 Protein of unknown function (DUF808) KU204_03780 PF04228 Putative neutral zinc metallopeptidase KU204_03785 PF00999 Sodium/hydrogen exchanger family KU204_03820 PF09587 Bacterial capsule synthesis protein PGA_cap KU204_03830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU204_03835 PF00582 Universal stress protein family KU204_03840 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_03845 PF01272 Transcription elongation factor, GreA/GreB, C-term KU204_03845 PF03449 Transcription elongation factor, N-terminal KU204_03850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_03850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KU204_03850 PF02142 MGS-like domain KU204_03855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KU204_03855 PF00117 Glutamine amidotransferase class-I KU204_03870 PF01985 CRS1 / YhbY (CRM) domain KU204_03875 PF01728 FtsJ-like methyltransferase KU204_03880 PF00004 ATPase family associated with various cellular activities (AAA) KU204_03880 PF17862 AAA+ lid domain KU204_03880 PF06480 FtsH Extracellular KU204_03880 PF01434 Peptidase family M41 KU204_03885 PF00809 Pterin binding enzyme KU204_03905 PF09423 PhoD-like phosphatase KU204_03905 PF16655 PhoD-like phosphatase, N-terminal domain KU204_03920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KU204_03920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KU204_03935 PF00083 Sugar (and other) transporter KU204_03940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KU204_03940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KU204_03945 PF01266 FAD dependent oxidoreductase KU204_03945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KU204_03950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KU204_03950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KU204_03955 PF00781 Diacylglycerol kinase catalytic domain KU204_03960 PF00149 Calcineurin-like phosphoesterase KU204_03970 PF00166 Chaperonin 10 Kd subunit KU204_03975 PF00118 TCP-1/cpn60 chaperonin family KU204_03980 PF01219 Prokaryotic diacylglycerol kinase KU204_03990 PF03009 Glycerophosphoryl diester phosphodiesterase family KU204_03995 PF00873 AcrB/AcrD/AcrF family KU204_04005 PF01435 Peptidase family M48 KU204_04010 PF01464 Transglycosylase SLT domain KU204_04015 PF01171 PP-loop family KU204_04025 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU204_04025 PF01464 Transglycosylase SLT domain KU204_04030 PF03449 Transcription elongation factor, N-terminal KU204_04030 PF01272 Transcription elongation factor, GreA/GreB, C-term KU204_04045 PF13193 AMP-binding enzyme C-terminal domain KU204_04045 PF00668 Condensation domain KU204_04045 PF00550 Phosphopantetheine attachment site KU204_04045 PF00501 AMP-binding enzyme KU204_04045 PF00975 Thioesterase domain KU204_04070 PF00881 Nitroreductase family KU204_04085 PF02595 Glycerate kinase family KU204_04090 PF00384 Molybdopterin oxidoreductase KU204_04095 PF02634 FdhD/NarQ family KU204_04100 PF06803 Protein of unknown function (DUF1232) KU204_04105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU204_04105 PF11890 Domain of unknown function (DUF3410) KU204_04105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU204_04110 PF00152 tRNA synthetases class II (D, K and N) KU204_04120 PF18073 Rubredoxin metal binding domain KU204_04125 PF00324 Amino acid permease KU204_04135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU204_04135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KU204_04140 PF01678 Diaminopimelate epimerase KU204_04145 PF01810 LysE type translocator KU204_04150 PF02899 Phage integrase, N-terminal SAM-like domain KU204_04150 PF00589 Phage integrase family KU204_04155 PF01012 Electron transfer flavoprotein domain KU204_04160 PF00766 Electron transfer flavoprotein FAD-binding domain KU204_04160 PF01012 Electron transfer flavoprotein domain KU204_04165 PF00521 DNA gyrase/topoisomerase IV, subunit A KU204_04165 PF03989 DNA gyrase C-terminal domain, beta-propeller KU204_04180 PF00535 Glycosyl transferase family 2 KU204_04200 PF13533 Biotin-lipoyl like KU204_04210 PF00266 Aminotransferase class-V KU204_04225 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KU204_04235 PF02687 FtsX-like permease family KU204_04235 PF12704 MacB-like periplasmic core domain KU204_04240 PF00005 ABC transporter KU204_04245 PF03772 Competence protein KU204_04245 PF13567 Domain of unknown function (DUF4131) KU204_04245 PF00753 Metallo-beta-lactamase superfamily KU204_04255 PF06965 Na+/H+ antiporter 1 KU204_04255 PF01343 Peptidase family S49 KU204_04260 PF12697 Alpha/beta hydrolase family KU204_04265 PF00551 Formyl transferase KU204_04270 PF00586 AIR synthase related protein, N-terminal domain KU204_04270 PF02769 AIR synthase related protein, C-terminal domain KU204_04275 PF01594 AI-2E family transporter KU204_04280 PF00308 Bacterial dnaA protein KU204_04280 PF08299 Bacterial dnaA protein helix-turn-helix KU204_04280 PF11638 DnaA N-terminal domain KU204_04310 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU204_04310 PF00588 SpoU rRNA Methylase family KU204_04315 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KU204_04325 PF00691 OmpA family KU204_04330 PF04052 TolB amino-terminal domain KU204_04330 PF07676 WD40-like Beta Propeller Repeat KU204_04340 PF02472 Biopolymer transport protein ExbD/TolR KU204_04345 PF01618 MotA/TolQ/ExbB proton channel family KU204_04350 PF03061 Thioesterase superfamily KU204_04355 PF07687 Peptidase dimerisation domain KU204_04355 PF01546 Peptidase family M20/M25/M40 KU204_04360 PF17864 RuvB AAA lid domain KU204_04360 PF05491 RuvB C-terminal winged helix domain KU204_04360 PF05496 Holliday junction DNA helicase RuvB P-loop domain KU204_04365 PF07499 RuvA, C-terminal domain KU204_04365 PF01330 RuvA N terminal domain KU204_04370 PF01966 HD domain KU204_04375 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KU204_04375 PF02769 AIR synthase related protein, C-terminal domain KU204_04375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KU204_04380 PF07690 Major Facilitator Superfamily KU204_04385 PF01784 NIF3 (NGG1p interacting factor 3) KU204_04390 PF00378 Enoyl-CoA hydratase/isomerase KU204_04395 PF01467 Cytidylyltransferase-like KU204_04395 PF00293 NUDIX domain KU204_04405 PF00578 AhpC/TSA family KU204_04420 PF06508 Queuosine biosynthesis protein QueC KU204_04430 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_04430 PF14602 Hexapeptide repeat of succinyl-transferase KU204_04430 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KU204_04440 PF03466 LysR substrate binding domain KU204_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_04445 PF12857 TOBE-like domain KU204_04445 PF00005 ABC transporter KU204_04450 PF00528 Binding-protein-dependent transport system inner membrane component KU204_04455 PF00528 Binding-protein-dependent transport system inner membrane component KU204_04470 PF01063 Amino-transferase class IV KU204_04475 PF02618 YceG-like family KU204_04480 PF02223 Thymidylate kinase KU204_04490 PF02910 Fumarate reductase flavoprotein C-term KU204_04490 PF00890 FAD binding domain KU204_04495 PF13180 PDZ domain KU204_04505 PF00679 Elongation factor G C-terminus KU204_04505 PF00009 Elongation factor Tu GTP binding domain KU204_04505 PF06421 GTP-binding protein LepA C-terminus KU204_04505 PF03144 Elongation factor Tu domain 2 KU204_04510 PF10502 Signal peptidase, peptidase S26 KU204_04520 PF00035 Double-stranded RNA binding motif KU204_04520 PF14622 Ribonuclease-III-like KU204_04525 PF07650 KH domain KU204_04525 PF01926 50S ribosome-binding GTPase KU204_04535 PF02565 Recombination protein O C terminal KU204_04535 PF11967 Recombination protein O N terminal KU204_04540 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KU204_04545 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KU204_04550 PF00106 short chain dehydrogenase KU204_04580 PF00155 Aminotransferase class I and II KU204_04590 PF00990 Diguanylate cyclase, GGDEF domain KU204_04590 PF17151 Periplasmic sensor domain KU204_04600 PF00271 Helicase conserved C-terminal domain KU204_04600 PF04851 Type III restriction enzyme, res subunit KU204_04600 PF12344 Ultra-violet resistance protein B KU204_04600 PF17757 UvrB interaction domain KU204_04600 PF02151 UvrB/uvrC motif KU204_04610 PF00892 EamA-like transporter family KU204_04615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU204_04615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU204_04630 PF01018 GTP1/OBG KU204_04630 PF01926 50S ribosome-binding GTPase KU204_04635 PF00696 Amino acid kinase family KU204_04635 PF01472 PUA domain KU204_04645 PF07759 Protein of unknown function (DUF1615) KU204_04650 PF01207 Dihydrouridine synthase (Dus) KU204_04655 PF03060 Nitronate monooxygenase KU204_04670 PF02350 UDP-N-acetylglucosamine 2-epimerase KU204_04700 PF00875 DNA photolyase KU204_04700 PF03441 FAD binding domain of DNA photolyase KU204_04705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_04710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_04715 PF00768 D-alanyl-D-alanine carboxypeptidase KU204_04715 PF07943 Penicillin-binding protein 5, C-terminal domain KU204_04725 PF03971 Monomeric isocitrate dehydrogenase KU204_04730 PF00849 RNA pseudouridylate synthase KU204_04735 PF00180 Isocitrate/isopropylmalate dehydrogenase KU204_04755 PF06779 Uncharacterised MFS-type transporter YbfB KU204_04760 PF03466 LysR substrate binding domain KU204_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_04765 PF00375 Sodium:dicarboxylate symporter family KU204_04770 PF02567 Phenazine biosynthesis-like protein KU204_04775 PF05193 Peptidase M16 inactive domain KU204_04775 PF00675 Insulinase (Peptidase family M16) KU204_04800 PF02581 Thiamine monophosphate synthase KU204_04805 PF00202 Aminotransferase class-III KU204_04815 PF00849 RNA pseudouridylate synthase KU204_04820 PF12137 RNA polymerase recycling family C-terminal KU204_04820 PF00176 SNF2 family N-terminal domain KU204_04820 PF18337 RapA N-terminal Tudor like domain KU204_04820 PF00271 Helicase conserved C-terminal domain KU204_04820 PF18339 RapA N-terminal Tudor like domain 1 KU204_04830 PF00440 Bacterial regulatory proteins, tetR family KU204_04835 PF00970 Oxidoreductase FAD-binding domain KU204_04835 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_04835 PF00175 Oxidoreductase NAD-binding domain KU204_04840 PF00487 Fatty acid desaturase KU204_04850 PF17754 MftR C-terminal domain KU204_04850 PF00440 Bacterial regulatory proteins, tetR family KU204_04860 PF00202 Aminotransferase class-III KU204_04865 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU204_04870 PF00171 Aldehyde dehydrogenase family KU204_04875 PF01037 Lrp/AsnC ligand binding domain KU204_04880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU204_04880 PF00205 Thiamine pyrophosphate enzyme, central domain KU204_04880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU204_04885 PF00324 Amino acid permease KU204_04890 PF12849 PBP superfamily domain KU204_04895 PF00528 Binding-protein-dependent transport system inner membrane component KU204_04900 PF00528 Binding-protein-dependent transport system inner membrane component KU204_04905 PF00005 ABC transporter KU204_04910 PF08496 Peptidase family S49 N-terminal KU204_04910 PF01343 Peptidase family S49 KU204_04920 PF00872 Transposase, Mutator family KU204_04930 PF00206 Lyase KU204_04930 PF08328 Adenylosuccinate lyase C-terminal KU204_04935 PF04356 Protein of unknown function (DUF489) KU204_04945 PF00293 NUDIX domain KU204_04945 PF13344 Haloacid dehalogenase-like hydrolase KU204_04950 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_04955 PF07943 Penicillin-binding protein 5, C-terminal domain KU204_04955 PF00768 D-alanyl-D-alanine carboxypeptidase KU204_04970 PF01975 Survival protein SurE KU204_04975 PF01476 LysM domain KU204_04975 PF01551 Peptidase family M23 KU204_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_04980 PF03466 LysR substrate binding domain KU204_04985 PF13654 AAA domain KU204_04985 PF05362 Lon protease (S16) C-terminal proteolytic domain KU204_04990 PF07690 Major Facilitator Superfamily KU204_04995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU204_05000 PF13593 SBF-like CPA transporter family (DUF4137) KU204_05005 PF01197 Ribosomal protein L31 KU204_05020 PF04055 Radical SAM superfamily KU204_05025 PF01132 Elongation factor P (EF-P) OB domain KU204_05025 PF08207 Elongation factor P (EF-P) KOW-like domain KU204_05025 PF09285 Elongation factor P, C-terminal KU204_05030 PF02554 Carbon starvation protein CstA KU204_05030 PF13722 5TM C-terminal transporter carbon starvation CstA KU204_05035 PF04328 Selenoprotein, putative KU204_05065 PF13556 PucR C-terminal helix-turn-helix domain KU204_05065 PF17853 GGDEF-like domain KU204_05065 PF06018 CodY GAF-like domain KU204_05080 PF00171 Aldehyde dehydrogenase family KU204_05085 PF00324 Amino acid permease KU204_05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_05090 PF03466 LysR substrate binding domain KU204_05095 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_05100 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_05105 PF00355 Rieske [2Fe-2S] domain KU204_05105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU204_05110 PF00171 Aldehyde dehydrogenase family KU204_05115 PF18113 Rubredoxin binding C-terminal domain KU204_05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_05120 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU204_05120 PF01266 FAD dependent oxidoreductase KU204_05140 PF00892 EamA-like transporter family KU204_05150 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KU204_05155 PF00083 Sugar (and other) transporter KU204_05160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU204_05160 PF13378 Enolase C-terminal domain-like KU204_05165 PF08990 Erythronolide synthase docking KU204_05165 PF14765 Polyketide synthase dehydratase KU204_05165 PF00550 Phosphopantetheine attachment site KU204_05165 PF08659 KR domain KU204_05165 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_05165 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_05165 PF16197 Ketoacyl-synthetase C-terminal extension KU204_05165 PF09277 Erythronolide synthase, docking KU204_05165 PF08240 Alcohol dehydrogenase GroES-like domain KU204_05165 PF00698 Acyl transferase domain KU204_05170 PF00440 Bacterial regulatory proteins, tetR family KU204_05190 PF17954 Quercetinase C-terminal cupin domain KU204_05190 PF02678 Pirin KU204_05200 PF08348 YheO-like PAS domain KU204_05200 PF13309 HTH domain KU204_05210 PF00668 Condensation domain KU204_05210 PF00550 Phosphopantetheine attachment site KU204_05210 PF00501 AMP-binding enzyme KU204_05210 PF13193 AMP-binding enzyme C-terminal domain KU204_05215 PF00975 Thioesterase domain KU204_05215 PF00550 Phosphopantetheine attachment site KU204_05215 PF00668 Condensation domain KU204_05215 PF13193 AMP-binding enzyme C-terminal domain KU204_05215 PF00501 AMP-binding enzyme KU204_05220 PF01032 FecCD transport family KU204_05225 PF01032 FecCD transport family KU204_05230 PF00005 ABC transporter KU204_05235 PF01497 Periplasmic binding protein KU204_05240 PF00593 TonB dependent receptor KU204_05240 PF07715 TonB-dependent Receptor Plug Domain KU204_05245 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU204_05250 PF00668 Condensation domain KU204_05250 PF00550 Phosphopantetheine attachment site KU204_05250 PF00501 AMP-binding enzyme KU204_05255 PF00501 AMP-binding enzyme KU204_05255 PF13193 AMP-binding enzyme C-terminal domain KU204_05260 PF00857 Isochorismatase family KU204_05260 PF00550 Phosphopantetheine attachment site KU204_05265 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU204_05275 PF00005 ABC transporter KU204_05280 PF00005 ABC transporter KU204_05285 PF00975 Thioesterase domain KU204_05295 PF00425 chorismate binding enzyme KU204_05305 PF01208 Uroporphyrinogen decarboxylase (URO-D) KU204_05310 PF05675 Protein of unknown function (DUF817) KU204_05325 PF00144 Beta-lactamase KU204_05335 PF01227 GTP cyclohydrolase I KU204_05340 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_05340 PF01799 [2Fe-2S] binding domain KU204_05345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KU204_05345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KU204_05360 PF00218 Indole-3-glycerol phosphate synthase KU204_05365 PF00591 Glycosyl transferase family, a/b domain KU204_05365 PF02885 Glycosyl transferase family, helical bundle domain KU204_05370 PF07715 TonB-dependent Receptor Plug Domain KU204_05370 PF00593 TonB dependent receptor KU204_05375 PF01433 Peptidase family M1 domain KU204_05375 PF11838 ERAP1-like C-terminal domain KU204_05380 PF00117 Glutamine amidotransferase class-I KU204_05390 PF00854 POT family KU204_05395 PF00120 Glutamine synthetase, catalytic domain KU204_05395 PF03951 Glutamine synthetase, beta-Grasp domain KU204_05400 PF04345 Chorismate lyase KU204_05405 PF01040 UbiA prenyltransferase family KU204_05440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KU204_05440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KU204_05445 PF01784 NIF3 (NGG1p interacting factor 3) KU204_05450 PF13180 PDZ domain KU204_05455 PF01743 Poly A polymerase head domain KU204_05455 PF12627 Probable RNA and SrmB- binding site of polymerase A KU204_05460 PF00390 Malic enzyme, N-terminal domain KU204_05460 PF03949 Malic enzyme, NAD binding domain KU204_05460 PF01515 Phosphate acetyl/butaryl transferase KU204_05465 PF00990 Diguanylate cyclase, GGDEF domain KU204_05465 PF03707 Bacterial signalling protein N terminal repeat KU204_05465 PF00563 EAL domain KU204_05470 PF04452 RNA methyltransferase KU204_05475 PF02219 Methylenetetrahydrofolate reductase KU204_05480 PF05221 S-adenosyl-L-homocysteine hydrolase KU204_05480 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KU204_05495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_05495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_05495 PF09317 Domain of unknown function (DUF1974) KU204_05500 PF04055 Radical SAM superfamily KU204_05505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_05505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU204_05515 PF07690 Major Facilitator Superfamily KU204_05525 PF00557 Metallopeptidase family M24 KU204_05530 PF00318 Ribosomal protein S2 KU204_05535 PF00889 Elongation factor TS KU204_05545 PF12833 Helix-turn-helix domain KU204_05565 PF03330 Lytic transglycolase KU204_05565 PF05036 Sporulation related domain KU204_05570 PF13406 Transglycosylase SLT domain KU204_05575 PF01098 Cell cycle protein KU204_05585 PF14489 QueF-like protein KU204_05585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KU204_05590 PF01061 ABC-2 type transporter KU204_05595 PF00005 ABC transporter KU204_05625 PF00464 Serine hydroxymethyltransferase KU204_05630 PF02321 Outer membrane efflux protein KU204_05635 PF00873 AcrB/AcrD/AcrF family KU204_05640 PF13533 Biotin-lipoyl like KU204_05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_05645 PF03466 LysR substrate binding domain KU204_05650 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU204_05655 PF00528 Binding-protein-dependent transport system inner membrane component KU204_05660 PF00528 Binding-protein-dependent transport system inner membrane component KU204_05665 PF00005 ABC transporter KU204_05670 PF00893 Small Multidrug Resistance protein KU204_05675 PF00037 4Fe-4S binding domain KU204_05680 PF01136 Peptidase family U32 KU204_05680 PF16325 Peptidase family U32 C-terminal domain KU204_05685 PF00155 Aminotransferase class I and II KU204_05685 PF00392 Bacterial regulatory proteins, gntR family KU204_05690 PF02567 Phenazine biosynthesis-like protein KU204_05695 PF00970 Oxidoreductase FAD-binding domain KU204_05695 PF00175 Oxidoreductase NAD-binding domain KU204_05700 PF01980 tRNA-methyltransferase O KU204_05700 PF18389 TrmO C-terminal domain KU204_05710 PF00437 Type II/IV secretion system protein KU204_05710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU204_05720 PF00072 Response regulator receiver domain KU204_05720 PF00486 Transcriptional regulatory protein, C terminal KU204_05725 PF00512 His Kinase A (phospho-acceptor) domain KU204_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_05725 PF08521 Two-component sensor kinase N-terminal KU204_05735 PF00293 NUDIX domain KU204_05745 PF00905 Penicillin binding protein transpeptidase domain KU204_05745 PF00912 Transglycosylase KU204_05745 PF14814 Bifunctional transglycosylase second domain KU204_05750 PF01513 ATP-NAD kinase KU204_05755 PF07023 Protein of unknown function (DUF1315) KU204_05760 PF02885 Glycosyl transferase family, helical bundle domain KU204_05760 PF00591 Glycosyl transferase family, a/b domain KU204_05765 PF00375 Sodium:dicarboxylate symporter family KU204_05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_05770 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_05775 PF00756 Putative esterase KU204_05780 PF01842 ACT domain KU204_05780 PF01817 Chorismate mutase type II KU204_05780 PF00800 Prephenate dehydratase KU204_05785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU204_05795 PF01546 Peptidase family M20/M25/M40 KU204_05795 PF07687 Peptidase dimerisation domain KU204_05800 PF12706 Beta-lactamase superfamily domain KU204_05810 PF03883 Peroxide stress protein YaaA KU204_05820 PF05690 Thiazole biosynthesis protein ThiG KU204_05830 PF04241 Protein of unknown function (DUF423) KU204_05835 PF00140 Sigma-70 factor, region 1.2 KU204_05835 PF04542 Sigma-70 region 2 KU204_05835 PF04545 Sigma-70, region 4 KU204_05845 PF00313 'Cold-shock' DNA-binding domain KU204_05850 PF00270 DEAD/DEAH box helicase KU204_05850 PF00271 Helicase conserved C-terminal domain KU204_05860 PF00881 Nitroreductase family KU204_05865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KU204_05865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KU204_05885 PF01180 Dihydroorotate dehydrogenase KU204_05890 PF02674 Colicin V production protein KU204_05895 PF00156 Phosphoribosyl transferase domain KU204_05910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU204_05910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU204_05915 PF01435 Peptidase family M48 KU204_05920 PF09424 Yqey-like protein KU204_05925 PF01165 Ribosomal protein S21 KU204_05930 PF00814 Glycoprotease family KU204_05950 PF00069 Protein kinase domain KU204_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_05975 PF03466 LysR substrate binding domain KU204_05980 PF00202 Aminotransferase class-III KU204_05985 PF00171 Aldehyde dehydrogenase family KU204_05990 PF00324 Amino acid permease KU204_06020 PF04076 Bacterial OB fold (BOF) protein KU204_06045 PF00561 alpha/beta hydrolase fold KU204_06050 PF03616 Sodium/glutamate symporter KU204_06060 PF07729 FCD domain KU204_06060 PF00392 Bacterial regulatory proteins, gntR family KU204_06110 PF00083 Sugar (and other) transporter KU204_06110 PF08946 Osmosensory transporter coiled coil KU204_06130 PF00155 Aminotransferase class I and II KU204_06135 PF06826 Predicted Permease Membrane Region KU204_06135 PF02080 TrkA-C domain KU204_06145 PF04403 Paraquat-inducible protein A KU204_06150 PF02470 MlaD protein KU204_06165 PF07091 Ribosomal RNA methyltransferase (FmrO) KU204_06185 PF00005 ABC transporter KU204_06185 PF12848 ABC transporter KU204_06190 PF01636 Phosphotransferase enzyme family KU204_06200 PF13817 IS66 C-terminal element KU204_06200 PF03050 Transposase IS66 family KU204_06200 PF13007 Transposase C of IS166 homeodomain KU204_06200 PF13005 zinc-finger binding domain of transposase IS66 KU204_06225 PF13610 DDE domain KU204_06240 PF00375 Sodium:dicarboxylate symporter family KU204_06250 PF16123 Hydroxyacylglutathione hydrolase C-terminus KU204_06250 PF00753 Metallo-beta-lactamase superfamily KU204_06255 PF00528 Binding-protein-dependent transport system inner membrane component KU204_06260 PF00005 ABC transporter KU204_06260 PF09383 NIL domain KU204_06265 PF03180 NLPA lipoprotein KU204_06270 PF02844 Phosphoribosylglycinamide synthetase, N domain KU204_06270 PF02843 Phosphoribosylglycinamide synthetase, C domain KU204_06270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KU204_06275 PF02142 MGS-like domain KU204_06275 PF01808 AICARFT/IMPCHase bienzyme KU204_06280 PF02954 Bacterial regulatory protein, Fis family KU204_06300 PF13932 GidA associated domain KU204_06300 PF01134 Glucose inhibited division protein A KU204_06310 PF14403 Circularly permuted ATP-grasp type 2 KU204_06320 PF01841 Transglutaminase-like superfamily KU204_06320 PF08379 Bacterial transglutaminase-like N-terminal region KU204_06330 PF01168 Alanine racemase, N-terminal domain KU204_06330 PF00842 Alanine racemase, C-terminal domain KU204_06335 PF03796 DnaB-like helicase C terminal domain KU204_06335 PF00772 DnaB-like helicase N terminal domain KU204_06340 PF03948 Ribosomal protein L9, C-terminal domain KU204_06340 PF01281 Ribosomal protein L9, N-terminal domain KU204_06345 PF01084 Ribosomal protein S18 KU204_06350 PF01250 Ribosomal protein S6 KU204_06355 PF01040 UbiA prenyltransferase family KU204_06360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KU204_06365 PF00510 Cytochrome c oxidase subunit III KU204_06370 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU204_06375 PF06481 COX Aromatic Rich Motif KU204_06375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KU204_06385 PF02896 PEP-utilising enzyme, TIM barrel domain KU204_06385 PF00391 PEP-utilising enzyme, mobile domain KU204_06385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KU204_06390 PF03618 Kinase/pyrophosphorylase KU204_06400 PF14883 Hypothetical glycosyl hydrolase family 13 KU204_06400 PF01522 Polysaccharide deacetylase KU204_06405 PF00535 Glycosyl transferase family 2 KU204_06410 PF13994 PgaD-like protein KU204_06420 PF00296 Luciferase-like monooxygenase KU204_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_06435 PF03466 LysR substrate binding domain KU204_06445 PF03462 PCRF domain KU204_06445 PF00472 RF-1 domain KU204_06450 PF13847 Methyltransferase domain KU204_06450 PF17827 PrmC N-terminal domain KU204_06455 PF00528 Binding-protein-dependent transport system inner membrane component KU204_06460 PF09084 NMT1/THI5 like KU204_06465 PF12833 Helix-turn-helix domain KU204_06470 PF00106 short chain dehydrogenase KU204_06475 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_06475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_06475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_06480 PF13193 AMP-binding enzyme C-terminal domain KU204_06480 PF00501 AMP-binding enzyme KU204_06485 PF01613 Flavin reductase like domain KU204_06490 PF00899 ThiF family KU204_06495 PF03109 ABC1 family KU204_06510 PF03814 Potassium-transporting ATPase A subunit KU204_06520 PF02669 K+-transporting ATPase, c chain KU204_06525 PF00512 His Kinase A (phospho-acceptor) domain KU204_06525 PF02702 Osmosensitive K+ channel His kinase sensor domain KU204_06525 PF13493 Domain of unknown function (DUF4118) KU204_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_06530 PF00072 Response regulator receiver domain KU204_06530 PF00486 Transcriptional regulatory protein, C terminal KU204_06535 PF00120 Glutamine synthetase, catalytic domain KU204_06545 PF03232 Ubiquinone biosynthesis protein COQ7 KU204_06550 PF07690 Major Facilitator Superfamily KU204_06555 PF01103 Surface antigen KU204_06555 PF07244 Surface antigen variable number repeat KU204_06555 PF17243 POTRA domain TamA domain 1 KU204_06570 PF06434 Aconitate hydratase 2 N-terminus KU204_06570 PF11791 Aconitate B N-terminal domain KU204_06570 PF00330 Aconitase family (aconitate hydratase) KU204_06580 PF00027 Cyclic nucleotide-binding domain KU204_06580 PF00520 Ion transport protein KU204_06585 PF07690 Major Facilitator Superfamily KU204_06630 PF00216 Bacterial DNA-binding protein KU204_06660 PF13401 AAA domain KU204_06660 PF01471 Putative peptidoglycan binding domain KU204_06690 PF10502 Signal peptidase, peptidase S26 KU204_06720 PF11985 Protein of unknown function (DUF3486) KU204_06725 PF03237 Terminase-like family KU204_06740 PF06074 Protein of unknown function (DUF935) KU204_06745 PF04233 Phage Mu protein F like protein KU204_06750 PF05069 Phage virion morphogenesis family KU204_06765 PF10124 Mu-like prophage major head subunit gpT KU204_06860 PF03466 LysR substrate binding domain KU204_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_06865 PF04284 Protein of unknown function (DUF441) KU204_06875 PF01479 S4 domain KU204_06875 PF00849 RNA pseudouridylate synthase KU204_06890 PF01479 S4 domain KU204_06890 PF00849 RNA pseudouridylate synthase KU204_06895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KU204_06900 PF08676 MutL C terminal dimerisation domain KU204_06900 PF01119 DNA mismatch repair protein, C-terminal domain KU204_06910 PF17209 Hfq protein KU204_06920 PF00881 Nitroreductase family KU204_06930 PF00149 Calcineurin-like phosphoesterase KU204_06935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU204_06940 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU204_06940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KU204_06945 PF02540 NAD synthase KU204_06945 PF00958 GMP synthase C terminal domain KU204_06945 PF00117 Glutamine amidotransferase class-I KU204_06950 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KU204_06955 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KU204_06960 PF13520 Amino acid permease KU204_06965 PF00171 Aldehyde dehydrogenase family KU204_06980 PF00465 Iron-containing alcohol dehydrogenase KU204_06985 PF14493 Helix-turn-helix domain KU204_06985 PF05970 PIF1-like helicase KU204_06995 PF06445 GyrI-like small molecule binding domain KU204_07000 PF02110 Hydroxyethylthiazole kinase family KU204_07015 PF11940 Domain of unknown function (DUF3458) Ig-like fold KU204_07015 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KU204_07015 PF01433 Peptidase family M1 domain KU204_07055 PF01817 Chorismate mutase type II KU204_07060 PF01037 Lrp/AsnC ligand binding domain KU204_07070 PF00440 Bacterial regulatory proteins, tetR family KU204_07075 PF00593 TonB dependent receptor KU204_07075 PF07715 TonB-dependent Receptor Plug Domain KU204_07080 PF00924 Mechanosensitive ion channel KU204_07115 PF07715 TonB-dependent Receptor Plug Domain KU204_07115 PF00593 TonB dependent receptor KU204_07135 PF12848 ABC transporter KU204_07135 PF00005 ABC transporter KU204_07140 PF00582 Universal stress protein family KU204_07165 PF00690 Cation transporter/ATPase, N-terminus KU204_07165 PF00689 Cation transporting ATPase, C-terminus KU204_07170 PF02308 MgtC family KU204_07175 PF03594 Benzoate membrane transport protein KU204_07180 PF01037 Lrp/AsnC ligand binding domain KU204_07185 PF01810 LysE type translocator KU204_07190 PF00923 Transaldolase/Fructose-6-phosphate aldolase KU204_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_07195 PF03466 LysR substrate binding domain KU204_07205 PF00108 Thiolase, N-terminal domain KU204_07205 PF02803 Thiolase, C-terminal domain KU204_07215 PF01575 MaoC like domain KU204_07220 PF00144 Beta-lactamase KU204_07230 PF07690 Major Facilitator Superfamily KU204_07235 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KU204_07235 PF12170 DNA polymerase III tau subunit V interacting with alpha KU204_07235 PF12169 DNA polymerase III subunits gamma and tau domain III KU204_07240 PF05506 Domain of unknown function (DUF756) KU204_07240 PF04185 Phosphoesterase family KU204_07245 PF03061 Thioesterase superfamily KU204_07250 PF00465 Iron-containing alcohol dehydrogenase KU204_07260 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU204_07265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KU204_07265 PF01565 FAD binding domain KU204_07280 PF01645 Conserved region in glutamate synthase KU204_07350 PF02384 N-6 DNA Methylase KU204_07350 PF12161 HsdM N-terminal domain KU204_07380 PF01555 DNA methylase KU204_07570 PF01551 Peptidase family M23 KU204_07570 PF08525 Opacity-associated protein A N-terminal motif KU204_07570 PF01476 LysM domain KU204_07635 PF12832 MFS_1 like family KU204_07645 PF02785 Biotin carboxylase C-terminal domain KU204_07645 PF00289 Biotin carboxylase, N-terminal domain KU204_07645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_07650 PF00364 Biotin-requiring enzyme KU204_07655 PF01220 Dehydroquinase class II KU204_07660 PF11799 impB/mucB/samB family C-terminal domain KU204_07660 PF13438 Domain of unknown function (DUF4113) KU204_07660 PF00817 impB/mucB/samB family KU204_07670 PF00005 ABC transporter KU204_07675 PF00072 Response regulator receiver domain KU204_07675 PF00486 Transcriptional regulatory protein, C terminal KU204_07685 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU204_07685 PF13806 Rieske-like [2Fe-2S] domain KU204_07685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU204_07685 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_07685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU204_07685 PF04324 BFD-like [2Fe-2S] binding domain KU204_07690 PF04324 BFD-like [2Fe-2S] binding domain KU204_07690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU204_07690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU204_07690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_07690 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU204_07695 PF00384 Molybdopterin oxidoreductase KU204_07695 PF01568 Molydopterin dinucleotide binding domain KU204_07695 PF04324 BFD-like [2Fe-2S] binding domain KU204_07695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU204_07700 PF12804 MobA-like NTP transferase domain KU204_07705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU204_07705 PF00384 Molybdopterin oxidoreductase KU204_07705 PF01568 Molydopterin dinucleotide binding domain KU204_07710 PF04055 Radical SAM superfamily KU204_07710 PF06463 Molybdenum Cofactor Synthesis C KU204_07720 PF02391 MoaE protein KU204_07725 PF01967 MoaC family KU204_07725 PF00994 Probable molybdopterin binding domain KU204_07730 PF03453 MoeA N-terminal region (domain I and II) KU204_07730 PF00994 Probable molybdopterin binding domain KU204_07730 PF03454 MoeA C-terminal region (domain IV) KU204_07735 PF01638 HxlR-like helix-turn-helix KU204_07740 PF00155 Aminotransferase class I and II KU204_07740 PF00392 Bacterial regulatory proteins, gntR family KU204_07745 PF00892 EamA-like transporter family KU204_07765 PF02635 DsrE/DsrF-like family KU204_07770 PF16363 GDP-mannose 4,6 dehydratase KU204_07775 PF10415 Fumarase C C-terminus KU204_07775 PF00206 Lyase KU204_07795 PF01266 FAD dependent oxidoreductase KU204_07805 PF02542 YgbB family KU204_07815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU204_07815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU204_07820 PF00440 Bacterial regulatory proteins, tetR family KU204_07825 PF00158 Sigma-54 interaction domain KU204_07825 PF00072 Response regulator receiver domain KU204_07825 PF02954 Bacterial regulatory protein, Fis family KU204_07830 PF00512 His Kinase A (phospho-acceptor) domain KU204_07830 PF00989 PAS fold KU204_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_07835 PF04055 Radical SAM superfamily KU204_07835 PF18693 TRAM domain KU204_07835 PF00919 Uncharacterized protein family UPF0004 KU204_07840 PF00696 Amino acid kinase family KU204_07845 PF01765 Ribosome recycling factor KU204_07850 PF01255 Putative undecaprenyl diphosphate synthase KU204_07860 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KU204_07860 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KU204_07860 PF13288 DXP reductoisomerase C-terminal domain KU204_07865 PF13180 PDZ domain KU204_07865 PF17820 PDZ domain KU204_07865 PF02163 Peptidase family M50 KU204_07870 PF07244 Surface antigen variable number repeat KU204_07870 PF01103 Surface antigen KU204_07880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KU204_07880 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_07885 PF07977 FabA-like domain KU204_07890 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_07890 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KU204_07905 PF02631 RecX family KU204_07910 PF00154 recA bacterial DNA recombination protein KU204_07915 PF01479 S4 domain KU204_07920 PF13419 Haloacid dehalogenase-like hydrolase KU204_07945 PF01037 Lrp/AsnC ligand binding domain KU204_07950 PF00266 Aminotransferase class-V KU204_07955 PF00324 Amino acid permease KU204_07965 PF05922 Peptidase inhibitor I9 KU204_07965 PF00082 Subtilase family KU204_07970 PF00916 Sulfate permease family KU204_07970 PF01740 STAS domain KU204_07975 PF02586 SOS response associated peptidase (SRAP) KU204_07980 PF07995 Glucose / Sorbosone dehydrogenase KU204_07990 PF00990 Diguanylate cyclase, GGDEF domain KU204_07990 PF03707 Bacterial signalling protein N terminal repeat KU204_07990 PF00563 EAL domain KU204_08010 PF02378 Phosphotransferase system, EIIC KU204_08010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KU204_08015 PF00294 pfkB family carbohydrate kinase KU204_08020 PF05524 PEP-utilising enzyme, N-terminal KU204_08020 PF02896 PEP-utilising enzyme, TIM barrel domain KU204_08020 PF00381 PTS HPr component phosphorylation site KU204_08020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KU204_08020 PF00391 PEP-utilising enzyme, mobile domain KU204_08045 PF05525 Branched-chain amino acid transport protein KU204_08050 PF00557 Metallopeptidase family M24 KU204_08055 PF03466 LysR substrate binding domain KU204_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08065 PF00462 Glutaredoxin KU204_08070 PF00202 Aminotransferase class-III KU204_08075 PF00478 IMP dehydrogenase / GMP reductase domain KU204_08075 PF00571 CBS domain KU204_08100 PF00448 SRP54-type protein, GTPase domain KU204_08100 PF02881 SRP54-type protein, helical bundle domain KU204_08110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KU204_08125 PF08173 Membrane bound YbgT-like protein KU204_08130 PF02322 Cytochrome bd terminal oxidase subunit II KU204_08135 PF01654 Cytochrome bd terminal oxidase subunit I KU204_08155 PF13007 Transposase C of IS166 homeodomain KU204_08155 PF13817 IS66 C-terminal element KU204_08155 PF03050 Transposase IS66 family KU204_08155 PF13005 zinc-finger binding domain of transposase IS66 KU204_08160 PF07290 Protein of unknown function (DUF1449) KU204_08170 PF00294 pfkB family carbohydrate kinase KU204_08175 PF07715 TonB-dependent Receptor Plug Domain KU204_08175 PF00593 TonB dependent receptor KU204_08180 PF00675 Insulinase (Peptidase family M16) KU204_08180 PF05193 Peptidase M16 inactive domain KU204_08180 PF08367 Peptidase M16C associated KU204_08185 PF02253 Phospholipase A1 KU204_08190 PF02386 Cation transport protein KU204_08195 PF02254 TrkA-N domain KU204_08195 PF02080 TrkA-C domain KU204_08200 PF00585 C-terminal regulatory domain of Threonine dehydratase KU204_08200 PF00291 Pyridoxal-phosphate dependent enzyme KU204_08205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KU204_08220 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU204_08220 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU204_08230 PF02617 ATP-dependent Clp protease adaptor protein ClpS KU204_08235 PF10431 C-terminal, D2-small domain, of ClpB protein KU204_08235 PF00004 ATPase family associated with various cellular activities (AAA) KU204_08235 PF07724 AAA domain (Cdc48 subfamily) KU204_08235 PF17871 AAA lid domain KU204_08235 PF02861 Clp amino terminal domain, pathogenicity island component KU204_08240 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KU204_08245 PF00793 DAHP synthetase I family KU204_08260 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_08260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_08290 PF06418 CTP synthase N-terminus KU204_08290 PF00117 Glutamine amidotransferase class-I KU204_08295 PF00793 DAHP synthetase I family KU204_08300 PF03952 Enolase, N-terminal domain KU204_08300 PF00113 Enolase, C-terminal TIM barrel domain KU204_08305 PF04239 Protein of unknown function (DUF421) KU204_08310 PF04977 Septum formation initiator KU204_08315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KU204_08320 PF01144 Coenzyme A transferase KU204_08325 PF01144 Coenzyme A transferase KU204_08330 PF02803 Thiolase, C-terminal domain KU204_08330 PF00108 Thiolase, N-terminal domain KU204_08335 PF00206 Lyase KU204_08335 PF10397 Adenylosuccinate lyase C-terminus KU204_08340 PF00561 alpha/beta hydrolase fold KU204_08345 PF07690 Major Facilitator Superfamily KU204_08350 PF02627 Carboxymuconolactone decarboxylase family KU204_08355 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KU204_08355 PF00775 Dioxygenase KU204_08360 PF00775 Dioxygenase KU204_08365 PF01487 Type I 3-dehydroquinase KU204_08370 PF05048 Periplasmic copper-binding protein (NosD) KU204_08375 PF04966 Carbohydrate-selective porin, OprB family KU204_08380 PF01011 PQQ enzyme repeat KU204_08380 PF13360 PQQ-like domain KU204_08390 PF04143 Sulphur transport KU204_08400 PF00753 Metallo-beta-lactamase superfamily KU204_08405 PF09339 IclR helix-turn-helix domain KU204_08405 PF01614 Bacterial transcriptional regulator KU204_08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08410 PF03466 LysR substrate binding domain KU204_08415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_08415 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_08415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_08430 PF00106 short chain dehydrogenase KU204_08440 PF07690 Major Facilitator Superfamily KU204_08450 PF01425 Amidase KU204_08455 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU204_08470 PF00355 Rieske [2Fe-2S] domain KU204_08470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU204_08485 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_08485 PF00175 Oxidoreductase NAD-binding domain KU204_08490 PF01613 Flavin reductase like domain KU204_08495 PF02311 AraC-like ligand binding domain KU204_08495 PF12833 Helix-turn-helix domain KU204_08500 PF01179 Copper amine oxidase, enzyme domain KU204_08500 PF07833 Copper amine oxidase N-terminal domain KU204_08500 PF02727 Copper amine oxidase, N2 domain KU204_08500 PF02728 Copper amine oxidase, N3 domain KU204_08510 PF00171 Aldehyde dehydrogenase family KU204_08515 PF01804 Penicillin amidase KU204_08520 PF12146 Serine aminopeptidase, S33 KU204_08525 PF02803 Thiolase, C-terminal domain KU204_08525 PF00108 Thiolase, N-terminal domain KU204_08530 PF01144 Coenzyme A transferase KU204_08535 PF01144 Coenzyme A transferase KU204_08540 PF04444 Catechol dioxygenase N terminus KU204_08540 PF00775 Dioxygenase KU204_08545 PF02426 Muconolactone delta-isomerase KU204_08550 PF13378 Enolase C-terminal domain-like KU204_08550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU204_08555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08555 PF03466 LysR substrate binding domain KU204_08565 PF00392 Bacterial regulatory proteins, gntR family KU204_08565 PF07729 FCD domain KU204_08570 PF00920 Dehydratase family KU204_08575 PF07690 Major Facilitator Superfamily KU204_08585 PF00171 Aldehyde dehydrogenase family KU204_08605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_08605 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_08605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_08615 PF00158 Sigma-54 interaction domain KU204_08615 PF06506 Propionate catabolism activator KU204_08615 PF02954 Bacterial regulatory protein, Fis family KU204_08620 PF00501 AMP-binding enzyme KU204_08620 PF13193 AMP-binding enzyme C-terminal domain KU204_08625 PF04341 Protein of unknown function, DUF485 KU204_08630 PF00474 Sodium:solute symporter family KU204_08635 PF08240 Alcohol dehydrogenase GroES-like domain KU204_08635 PF00107 Zinc-binding dehydrogenase KU204_08640 PF00171 Aldehyde dehydrogenase family KU204_08650 PF00561 alpha/beta hydrolase fold KU204_08655 PF00199 Catalase KU204_08655 PF06628 Catalase-related immune-responsive KU204_08670 PF07859 alpha/beta hydrolase fold KU204_08675 PF01047 MarR family KU204_08680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_08685 PF00106 short chain dehydrogenase KU204_08690 PF01872 RibD C-terminal domain KU204_08695 PF00376 MerR family regulatory protein KU204_08695 PF09278 MerR, DNA binding KU204_08705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_08715 PF12706 Beta-lactamase superfamily domain KU204_08720 PF00440 Bacterial regulatory proteins, tetR family KU204_08720 PF08359 YsiA-like protein, C-terminal region KU204_08730 PF00857 Isochorismatase family KU204_08735 PF03466 LysR substrate binding domain KU204_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08740 PF07995 Glucose / Sorbosone dehydrogenase KU204_08745 PF00999 Sodium/hydrogen exchanger family KU204_08745 PF02254 TrkA-N domain KU204_08755 PF07687 Peptidase dimerisation domain KU204_08755 PF01546 Peptidase family M20/M25/M40 KU204_08765 PF08479 POTRA domain, ShlB-type KU204_08765 PF17287 POTRA domain KU204_08765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KU204_08770 PF13018 Extended Signal Peptide of Type V secretion system KU204_08770 PF13332 Hemagglutinin repeat KU204_08770 PF05860 haemagglutination activity domain KU204_08770 PF04829 Pre-toxin domain with VENN motif KU204_08785 PF07690 Major Facilitator Superfamily KU204_08790 PF04909 Amidohydrolase KU204_08800 PF00392 Bacterial regulatory proteins, gntR family KU204_08800 PF07702 UTRA domain KU204_08805 PF08450 SMP-30/Gluconolactonase/LRE-like region KU204_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08815 PF03466 LysR substrate binding domain KU204_08835 PF07690 Major Facilitator Superfamily KU204_08840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU204_08840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU204_08840 PF01842 ACT domain KU204_08845 PF03737 Aldolase/RraA KU204_08865 PF00529 HlyD membrane-fusion protein of T1SS KU204_08865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_08880 PF00171 Aldehyde dehydrogenase family KU204_08885 PF00920 Dehydratase family KU204_08895 PF03466 LysR substrate binding domain KU204_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_08900 PF01370 NAD dependent epimerase/dehydratase family KU204_08905 PF07690 Major Facilitator Superfamily KU204_08910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU204_08910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU204_08915 PF06719 AraC-type transcriptional regulator N-terminus KU204_08915 PF12833 Helix-turn-helix domain KU204_08930 PF08240 Alcohol dehydrogenase GroES-like domain KU204_08930 PF00107 Zinc-binding dehydrogenase KU204_08940 PF01032 FecCD transport family KU204_08945 PF00005 ABC transporter KU204_08965 PF14572 Phosphoribosyl synthetase-associated domain KU204_08965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU204_08970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU204_09040 PF00196 Bacterial regulatory proteins, luxR family KU204_09045 PF01425 Amidase KU204_09050 PF13533 Biotin-lipoyl like KU204_09055 PF07690 Major Facilitator Superfamily KU204_09080 PF01975 Survival protein SurE KU204_09090 PF13291 ACT domain KU204_09090 PF04607 Region found in RelA / SpoT proteins KU204_09090 PF02824 TGS domain KU204_09140 PF12146 Serine aminopeptidase, S33 KU204_09145 PF02311 AraC-like ligand binding domain KU204_09145 PF12833 Helix-turn-helix domain KU204_09155 PF16527 Two-component sensor protein CpxA, periplasmic domain KU204_09155 PF00512 His Kinase A (phospho-acceptor) domain KU204_09155 PF00672 HAMP domain KU204_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_09160 PF00072 Response regulator receiver domain KU204_09160 PF00486 Transcriptional regulatory protein, C terminal KU204_09165 PF00529 HlyD membrane-fusion protein of T1SS KU204_09165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_09170 PF00873 AcrB/AcrD/AcrF family KU204_09180 PF12146 Serine aminopeptidase, S33 KU204_09185 PF00743 Flavin-binding monooxygenase-like KU204_09190 PF01593 Flavin containing amine oxidoreductase KU204_09205 PF01266 FAD dependent oxidoreductase KU204_09225 PF16970 Type-1 fimbrial protein, A KU204_09235 PF02753 Pili assembly chaperone PapD, C-terminal domain KU204_09235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU204_09240 PF13953 PapC C-terminal domain KU204_09240 PF13954 PapC N-terminal domain KU204_09240 PF00577 Outer membrane usher protein KU204_09245 PF00419 Fimbrial protein KU204_09255 PF08240 Alcohol dehydrogenase GroES-like domain KU204_09255 PF00107 Zinc-binding dehydrogenase KU204_09265 PF00199 Catalase KU204_09280 PF13091 PLD-like domain KU204_09295 PF01244 Membrane dipeptidase (Peptidase family M19) KU204_09300 PF04055 Radical SAM superfamily KU204_09300 PF13186 Iron-sulfur cluster-binding domain KU204_09305 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KU204_09310 PF03070 TENA/THI-4/PQQC family KU204_09315 PF12706 Beta-lactamase superfamily domain KU204_09320 PF08042 PqqA family KU204_09325 PF02503 Polyphosphate kinase middle domain KU204_09325 PF13090 Polyphosphate kinase C-terminal domain 2 KU204_09325 PF13089 Polyphosphate kinase N-terminal domain KU204_09325 PF17941 Polyphosphate kinase C-terminal domain 1 KU204_09330 PF00149 Calcineurin-like phosphoesterase KU204_09340 PF00857 Isochorismatase family KU204_09340 PF00550 Phosphopantetheine attachment site KU204_09345 PF00106 short chain dehydrogenase KU204_09350 PF03459 TOBE domain KU204_09350 PF00005 ABC transporter KU204_09355 PF00528 Binding-protein-dependent transport system inner membrane component KU204_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_09365 PF03459 TOBE domain KU204_09370 PF00355 Rieske [2Fe-2S] domain KU204_09370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU204_09375 PF00866 Ring hydroxylating beta subunit KU204_09380 PF00970 Oxidoreductase FAD-binding domain KU204_09380 PF00175 Oxidoreductase NAD-binding domain KU204_09380 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_09385 PF14525 AraC-binding-like domain KU204_09385 PF12833 Helix-turn-helix domain KU204_09395 PF01613 Flavin reductase like domain KU204_09410 PF01738 Dienelactone hydrolase family KU204_09420 PF12833 Helix-turn-helix domain KU204_09420 PF06719 AraC-type transcriptional regulator N-terminus KU204_09445 PF03466 LysR substrate binding domain KU204_09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_09450 PF01144 Coenzyme A transferase KU204_09455 PF01144 Coenzyme A transferase KU204_09460 PF02667 Short chain fatty acid transporter KU204_09465 PF00108 Thiolase, N-terminal domain KU204_09465 PF02803 Thiolase, C-terminal domain KU204_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_09470 PF03466 LysR substrate binding domain KU204_09475 PF03466 LysR substrate binding domain KU204_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_09490 PF00206 Lyase KU204_09490 PF10415 Fumarase C C-terminus KU204_09495 PF07715 TonB-dependent Receptor Plug Domain KU204_09495 PF00593 TonB dependent receptor KU204_09500 PF00083 Sugar (and other) transporter KU204_09515 PF00005 ABC transporter KU204_09520 PF00528 Binding-protein-dependent transport system inner membrane component KU204_09525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU204_09540 PF07702 UTRA domain KU204_09540 PF00392 Bacterial regulatory proteins, gntR family KU204_09550 PF02525 Flavodoxin-like fold KU204_09555 PF01638 HxlR-like helix-turn-helix KU204_09560 PF06445 GyrI-like small molecule binding domain KU204_09560 PF12833 Helix-turn-helix domain KU204_09575 PF01925 Sulfite exporter TauE/SafE KU204_09580 PF00753 Metallo-beta-lactamase superfamily KU204_09580 PF04273 Putative phosphatase (DUF442) KU204_09585 PF00753 Metallo-beta-lactamase superfamily KU204_09585 PF04273 Putative phosphatase (DUF442) KU204_09590 PF00158 Sigma-54 interaction domain KU204_09590 PF02954 Bacterial regulatory protein, Fis family KU204_09590 PF00072 Response regulator receiver domain KU204_09595 PF01062 Bestrophin, RFP-TM, chloride channel KU204_09600 PF00107 Zinc-binding dehydrogenase KU204_09600 PF08240 Alcohol dehydrogenase GroES-like domain KU204_09605 PF00106 short chain dehydrogenase KU204_09610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU204_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_09615 PF02817 e3 binding domain KU204_09615 PF00364 Biotin-requiring enzyme KU204_09615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU204_09620 PF02779 Transketolase, pyrimidine binding domain KU204_09620 PF02780 Transketolase, C-terminal domain KU204_09625 PF00676 Dehydrogenase E1 component KU204_09630 PF04055 Radical SAM superfamily KU204_09645 PF08448 PAS fold KU204_09645 PF00990 Diguanylate cyclase, GGDEF domain KU204_09650 PF01264 Chorismate synthase KU204_09655 PF05175 Methyltransferase small domain KU204_09660 PF00291 Pyridoxal-phosphate dependent enzyme KU204_09670 PF01434 Peptidase family M41 KU204_09670 PF17862 AAA+ lid domain KU204_09670 PF00004 ATPase family associated with various cellular activities (AAA) KU204_09680 PF05166 YcgL domain KU204_09700 PF00570 HRDC domain KU204_09700 PF01612 3'-5' exonuclease KU204_09705 PF02132 RecR protein KU204_09705 PF13662 Toprim domain KU204_09710 PF02575 YbaB/EbfC DNA-binding family KU204_09720 PF01053 Cys/Met metabolism PLP-dependent enzyme KU204_09725 PF00561 alpha/beta hydrolase fold KU204_09730 PF08241 Methyltransferase domain KU204_09760 PF01230 HIT domain KU204_09795 PF00005 ABC transporter KU204_09800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_09810 PF02684 Lipid-A-disaccharide synthetase KU204_09815 PF07715 TonB-dependent Receptor Plug Domain KU204_09815 PF00593 TonB dependent receptor KU204_09835 PF01925 Sulfite exporter TauE/SafE KU204_09840 PF00793 DAHP synthetase I family KU204_09845 PF02654 Cobalamin-5-phosphate synthase KU204_09860 PF02277 Phosphoribosyltransferase KU204_09865 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KU204_09875 PF13419 Haloacid dehalogenase-like hydrolase KU204_09900 PF07715 TonB-dependent Receptor Plug Domain KU204_09900 PF00593 TonB dependent receptor KU204_09915 PF06276 Ferric iron reductase FhuF-like transporter KU204_09915 PF04183 IucA / IucC family KU204_09920 PF06276 Ferric iron reductase FhuF-like transporter KU204_09920 PF04183 IucA / IucC family KU204_09925 PF07690 Major Facilitator Superfamily KU204_09930 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU204_09935 PF04183 IucA / IucC family KU204_09935 PF06276 Ferric iron reductase FhuF-like transporter KU204_09940 PF04073 Aminoacyl-tRNA editing domain KU204_09950 PF03109 ABC1 family KU204_09955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_09955 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_09955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_09960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_09960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_09960 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_09965 PF00487 Fatty acid desaturase KU204_09970 PF12852 Cupin KU204_09970 PF12833 Helix-turn-helix domain KU204_09975 PF00639 PPIC-type PPIASE domain KU204_09975 PF09312 SurA N-terminal domain KU204_09980 PF00216 Bacterial DNA-binding protein KU204_09995 PF02082 Transcriptional regulator KU204_10000 PF00266 Aminotransferase class-V KU204_10005 PF01592 NifU-like N terminal domain KU204_10010 PF01521 Iron-sulphur cluster biosynthesis KU204_10015 PF00226 DnaJ domain KU204_10015 PF07743 HSCB C-terminal oligomerisation domain KU204_10020 PF00012 Hsp70 protein KU204_10025 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_10030 PF00211 Adenylate and Guanylate cyclase catalytic domain KU204_10040 PF02559 CarD-like/TRCF domain KU204_10040 PF00270 DEAD/DEAH box helicase KU204_10040 PF00271 Helicase conserved C-terminal domain KU204_10040 PF17757 UvrB interaction domain KU204_10040 PF03461 TRCF domain KU204_10060 PF03737 Aldolase/RraA KU204_10065 PF13460 NAD(P)H-binding KU204_10070 PF01649 Ribosomal protein S20 KU204_10080 PF00459 Inositol monophosphatase family KU204_10095 PF00005 ABC transporter KU204_10095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU204_10100 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10105 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10110 PF01432 Peptidase family M3 KU204_10130 PF00593 TonB dependent receptor KU204_10130 PF07715 TonB-dependent Receptor Plug Domain KU204_10140 PF01618 MotA/TolQ/ExbB proton channel family KU204_10145 PF02472 Biopolymer transport protein ExbD/TolR KU204_10150 PF02472 Biopolymer transport protein ExbD/TolR KU204_10160 PF01274 Malate synthase KU204_10165 PF03969 AFG1-like ATPase KU204_10175 PF00743 Flavin-binding monooxygenase-like KU204_10185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KU204_10195 PF00216 Bacterial DNA-binding protein KU204_10200 PF00575 S1 RNA binding domain KU204_10205 PF02224 Cytidylate kinase KU204_10215 PF14437 MafB19-like deaminase KU204_10225 PF03167 Uracil DNA glycosylase superfamily KU204_10235 PF03934 Type II secretion system (T2SS), protein K KU204_10240 PF07963 Prokaryotic N-terminal methylation motif KU204_10240 PF11612 Type II secretion system (T2SS), protein J KU204_10245 PF07963 Prokaryotic N-terminal methylation motif KU204_10245 PF02501 Type II secretion system (T2SS), protein I KU204_10260 PF01026 TatD related DNase KU204_10270 PF09115 DNA polymerase III, delta subunit, C terminal KU204_10275 PF02348 Cytidylyltransferase KU204_10280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KU204_10285 PF00005 ABC transporter KU204_10285 PF00664 ABC transporter transmembrane region KU204_10295 PF01618 MotA/TolQ/ExbB proton channel family KU204_10300 PF02195 ParB-like nuclease domain KU204_10300 PF17762 HTH domain found in ParB protein KU204_10305 PF13614 AAA domain KU204_10310 PF02527 rRNA small subunit methyltransferase G KU204_10315 PF00483 Nucleotidyl transferase KU204_10320 PF01636 Phosphotransferase enzyme family KU204_10325 PF04453 LPS transport system D KU204_10325 PF03968 OstA-like protein KU204_10330 PF00639 PPIC-type PPIASE domain KU204_10330 PF09312 SurA N-terminal domain KU204_10335 PF01116 Fructose-bisphosphate aldolase class-II KU204_10345 PF00162 Phosphoglycerate kinase KU204_10355 PF02545 Maf-like protein KU204_10360 PF08007 Cupin superfamily protein KU204_10380 PF00375 Sodium:dicarboxylate symporter family KU204_10385 PF06912 Protein of unknown function (DUF1275) KU204_10390 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KU204_10395 PF00005 ABC transporter KU204_10395 PF00664 ABC transporter transmembrane region KU204_10405 PF12833 Helix-turn-helix domain KU204_10405 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU204_10410 PF01597 Glycine cleavage H-protein KU204_10415 PF02146 Sir2 family KU204_10420 PF00474 Sodium:solute symporter family KU204_10425 PF01037 Lrp/AsnC ligand binding domain KU204_10430 PF14850 DNA-binding domain of Proline dehydrogenase KU204_10430 PF00171 Aldehyde dehydrogenase family KU204_10430 PF01619 Proline dehydrogenase KU204_10430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KU204_10435 PF04229 GrpB protein KU204_10440 PF05958 tRNA (Uracil-5-)-methyltransferase KU204_10450 PF09992 Phosphodiester glycosidase KU204_10460 PF04264 YceI-like domain KU204_10470 PF02780 Transketolase, C-terminal domain KU204_10470 PF02779 Transketolase, pyrimidine binding domain KU204_10470 PF00456 Transketolase, thiamine diphosphate binding domain KU204_10475 PF02772 S-adenosylmethionine synthetase, central domain KU204_10475 PF00438 S-adenosylmethionine synthetase, N-terminal domain KU204_10475 PF02773 S-adenosylmethionine synthetase, C-terminal domain KU204_10495 PF00905 Penicillin binding protein transpeptidase domain KU204_10510 PF02075 Crossover junction endodeoxyribonuclease RuvC KU204_10515 PF01256 Carbohydrate kinase KU204_10515 PF03853 YjeF-related protein N-terminus KU204_10520 PF08331 Domain of unknown function (DUF1730) KU204_10525 PF06968 Biotin and Thiamin Synthesis associated domain KU204_10525 PF04055 Radical SAM superfamily KU204_10540 PF16970 Type-1 fimbrial protein, A KU204_10545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU204_10545 PF02753 Pili assembly chaperone PapD, C-terminal domain KU204_10550 PF13954 PapC N-terminal domain KU204_10550 PF00577 Outer membrane usher protein KU204_10550 PF13953 PapC C-terminal domain KU204_10570 PF00892 EamA-like transporter family KU204_10580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU204_10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_10590 PF03466 LysR substrate binding domain KU204_10610 PF00440 Bacterial regulatory proteins, tetR family KU204_10620 PF01709 Transcriptional regulator KU204_10625 PF01037 Lrp/AsnC ligand binding domain KU204_10635 PF00005 ABC transporter KU204_10640 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10645 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10660 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU204_10660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_10670 PF00296 Luciferase-like monooxygenase KU204_10675 PF03180 NLPA lipoprotein KU204_10680 PF03180 NLPA lipoprotein KU204_10685 PF00005 ABC transporter KU204_10685 PF09383 NIL domain KU204_10690 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10695 PF01926 50S ribosome-binding GTPase KU204_10695 PF06071 Protein of unknown function (DUF933) KU204_10720 PF03591 AzlC protein KU204_10725 PF05437 Branched-chain amino acid transport protein (AzlD) KU204_10735 PF02222 ATP-grasp domain KU204_10740 PF08335 GlnD PII-uridylyltransferase KU204_10740 PF01966 HD domain KU204_10740 PF01909 Nucleotidyltransferase domain KU204_10745 PF00155 Aminotransferase class I and II KU204_10755 PF12852 Cupin KU204_10755 PF12833 Helix-turn-helix domain KU204_10760 PF00255 Glutathione peroxidase KU204_10765 PF01641 SelR domain KU204_10770 PF00155 Aminotransferase class I and II KU204_10775 PF00375 Sodium:dicarboxylate symporter family KU204_10780 PF17763 Glutaminase/Asparaginase C-terminal domain KU204_10780 PF00710 Asparaginase, N-terminal KU204_10785 PF14579 Helix-hairpin-helix motif KU204_10785 PF02811 PHP domain KU204_10785 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU204_10785 PF01336 OB-fold nucleic acid binding domain KU204_10785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU204_10790 PF00588 SpoU rRNA Methylase family KU204_10795 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_10810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_10810 PF13192 Thioredoxin domain KU204_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_10825 PF03466 LysR substrate binding domain KU204_10830 PF01758 Sodium Bile acid symporter family KU204_10835 PF01022 Bacterial regulatory protein, arsR family KU204_10840 PF03960 ArsC family KU204_10850 PF01979 Amidohydrolase family KU204_10850 PF13382 Adenine deaminase C-terminal domain KU204_10860 PF03466 LysR substrate binding domain KU204_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_10870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU204_10875 PF01177 Asp/Glu/Hydantoin racemase KU204_10880 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KU204_10885 PF00528 Binding-protein-dependent transport system inner membrane component KU204_10890 PF00005 ABC transporter KU204_10895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU204_10905 PF00083 Sugar (and other) transporter KU204_10910 PF00296 Luciferase-like monooxygenase KU204_10915 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_10915 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU204_10915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_10925 PF01654 Cytochrome bd terminal oxidase subunit I KU204_10930 PF02322 Cytochrome bd terminal oxidase subunit II KU204_10940 PF00392 Bacterial regulatory proteins, gntR family KU204_10940 PF00155 Aminotransferase class I and II KU204_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_10945 PF03466 LysR substrate binding domain KU204_10960 PF00698 Acyl transferase domain KU204_10965 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KU204_10975 PF01039 Carboxyl transferase domain KU204_10980 PF06857 Malonate decarboxylase delta subunit (MdcD) KU204_10985 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KU204_10990 PF16957 Malonate decarboxylase, alpha subunit, transporter KU204_10995 PF07690 Major Facilitator Superfamily KU204_11010 PF00392 Bacterial regulatory proteins, gntR family KU204_11010 PF00155 Aminotransferase class I and II KU204_11015 PF04172 LrgB-like family KU204_11020 PF03788 LrgA family KU204_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11025 PF03466 LysR substrate binding domain KU204_11030 PF14834 Glutathione S-transferase, C-terminal domain KU204_11030 PF02798 Glutathione S-transferase, N-terminal domain KU204_11035 PF02798 Glutathione S-transferase, N-terminal domain KU204_11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11040 PF03466 LysR substrate binding domain KU204_11050 PF00581 Rhodanese-like domain KU204_11055 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_11065 PF00266 Aminotransferase class-V KU204_11075 PF01810 LysE type translocator KU204_11080 PF03466 LysR substrate binding domain KU204_11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11090 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU204_11095 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU204_11100 PF00005 ABC transporter KU204_11105 PF00528 Binding-protein-dependent transport system inner membrane component KU204_11110 PF00528 Binding-protein-dependent transport system inner membrane component KU204_11125 PF00072 Response regulator receiver domain KU204_11130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_11130 PF00072 Response regulator receiver domain KU204_11130 PF00512 His Kinase A (phospho-acceptor) domain KU204_11130 PF09308 LuxQ, periplasmic KU204_11140 PF01037 Lrp/AsnC ligand binding domain KU204_11140 PF13404 AsnC-type helix-turn-helix domain KU204_11150 PF00717 Peptidase S24-like KU204_11175 PF00199 Catalase KU204_11175 PF06628 Catalase-related immune-responsive KU204_11175 PF18011 C-terminal domain found in long catalases KU204_11185 PF02464 Competence-damaged protein KU204_11185 PF18146 Damage-inducible protein CinA KH domain KU204_11185 PF00994 Probable molybdopterin binding domain KU204_11220 PF03466 LysR substrate binding domain KU204_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11240 PF13193 AMP-binding enzyme C-terminal domain KU204_11240 PF00501 AMP-binding enzyme KU204_11245 PF00440 Bacterial regulatory proteins, tetR family KU204_11250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_11250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_11250 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_11255 PF01039 Carboxyl transferase domain KU204_11260 PF00378 Enoyl-CoA hydratase/isomerase KU204_11265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_11265 PF02785 Biotin carboxylase C-terminal domain KU204_11265 PF00289 Biotin carboxylase, N-terminal domain KU204_11265 PF00364 Biotin-requiring enzyme KU204_11265 PF18140 Propionyl-coenzyme A carboxylase BT domain KU204_11270 PF00682 HMGL-like KU204_11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11275 PF03466 LysR substrate binding domain KU204_11290 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_11290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_11290 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU204_11290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_11300 PF07690 Major Facilitator Superfamily KU204_11310 PF01144 Coenzyme A transferase KU204_11315 PF01144 Coenzyme A transferase KU204_11320 PF07690 Major Facilitator Superfamily KU204_11325 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_11325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_11325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_11330 PF00378 Enoyl-CoA hydratase/isomerase KU204_11340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU204_11340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU204_11340 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU204_11345 PF02803 Thiolase, C-terminal domain KU204_11345 PF00108 Thiolase, N-terminal domain KU204_11350 PF09339 IclR helix-turn-helix domain KU204_11355 PF07690 Major Facilitator Superfamily KU204_11360 PF03060 Nitronate monooxygenase KU204_11365 PF00378 Enoyl-CoA hydratase/isomerase KU204_11370 PF09339 IclR helix-turn-helix domain KU204_11375 PF02515 CoA-transferase family III KU204_11380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_11380 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_11380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_11385 PF07690 Major Facilitator Superfamily KU204_11390 PF13419 Haloacid dehalogenase-like hydrolase KU204_11395 PF00266 Aminotransferase class-V KU204_11400 PF01266 FAD dependent oxidoreductase KU204_11405 PF00528 Binding-protein-dependent transport system inner membrane component KU204_11410 PF00005 ABC transporter KU204_11410 PF08402 TOBE domain KU204_11420 PF00392 Bacterial regulatory proteins, gntR family KU204_11420 PF07702 UTRA domain KU204_11425 PF01494 FAD binding domain KU204_11430 PF09339 IclR helix-turn-helix domain KU204_11430 PF01614 Bacterial transcriptional regulator KU204_11435 PF02525 Flavodoxin-like fold KU204_11440 PF03466 LysR substrate binding domain KU204_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11445 PF02627 Carboxymuconolactone decarboxylase family KU204_11450 PF00171 Aldehyde dehydrogenase family KU204_11460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU204_11470 PF00171 Aldehyde dehydrogenase family KU204_11475 PF00296 Luciferase-like monooxygenase KU204_11480 PF01613 Flavin reductase like domain KU204_11485 PF12697 Alpha/beta hydrolase family KU204_11505 PF01292 Prokaryotic cytochrome b561 KU204_11510 PF00199 Catalase KU204_11545 PF03061 Thioesterase superfamily KU204_11550 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_11555 PF08223 PaaX-like protein C-terminal domain KU204_11555 PF07848 PaaX-like protein KU204_11560 PF00501 AMP-binding enzyme KU204_11560 PF14535 AMP-binding enzyme C-terminal domain KU204_11565 PF02803 Thiolase, C-terminal domain KU204_11565 PF00108 Thiolase, N-terminal domain KU204_11570 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU204_11570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU204_11570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU204_11575 PF00378 Enoyl-CoA hydratase/isomerase KU204_11580 PF00378 Enoyl-CoA hydratase/isomerase KU204_11585 PF00175 Oxidoreductase NAD-binding domain KU204_11585 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_11585 PF00970 Oxidoreductase FAD-binding domain KU204_11590 PF01883 Iron-sulfur cluster assembly protein KU204_11595 PF05138 Phenylacetic acid catabolic protein KU204_11600 PF06243 Phenylacetic acid degradation B KU204_11605 PF05138 Phenylacetic acid catabolic protein KU204_11610 PF01575 MaoC like domain KU204_11610 PF00171 Aldehyde dehydrogenase family KU204_11615 PF03313 Serine dehydratase alpha chain KU204_11615 PF03315 Serine dehydratase beta chain KU204_11620 PF13520 Amino acid permease KU204_11625 PF00171 Aldehyde dehydrogenase family KU204_11630 PF00083 Sugar (and other) transporter KU204_11640 PF04324 BFD-like [2Fe-2S] binding domain KU204_11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_11650 PF01266 FAD dependent oxidoreductase KU204_11655 PF05544 Proline racemase KU204_11660 PF00392 Bacterial regulatory proteins, gntR family KU204_11670 PF00701 Dihydrodipicolinate synthetase family KU204_11680 PF00376 MerR family regulatory protein KU204_11680 PF09278 MerR, DNA binding KU204_11695 PF02677 Epoxyqueuosine reductase QueH KU204_11710 PF07690 Major Facilitator Superfamily KU204_11715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU204_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11725 PF03466 LysR substrate binding domain KU204_11745 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KU204_11750 PF06812 ImpA, N-terminal, type VI secretion system KU204_11755 PF00004 ATPase family associated with various cellular activities (AAA) KU204_11755 PF07724 AAA domain (Cdc48 subfamily) KU204_11755 PF10431 C-terminal, D2-small domain, of ClpB protein KU204_11755 PF17871 AAA lid domain KU204_11765 PF01389 OmpA-like transmembrane domain KU204_11765 PF00691 OmpA family KU204_11775 PF06744 Type VI secretion protein IcmF C-terminal KU204_11775 PF14331 ImcF-related N-terminal domain KU204_11775 PF06761 Intracellular multiplication and human macrophage-killing KU204_11790 PF05947 Type VI secretion system, TssF KU204_11805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU204_11830 PF00005 ABC transporter KU204_11835 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU204_11840 PF01425 Amidase KU204_11845 PF08753 NikR C terminal nickel binding domain KU204_11845 PF01402 Ribbon-helix-helix protein, copG family KU204_11865 PF02525 Flavodoxin-like fold KU204_11870 PF00289 Biotin carboxylase, N-terminal domain KU204_11870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_11870 PF02785 Biotin carboxylase C-terminal domain KU204_11895 PF00440 Bacterial regulatory proteins, tetR family KU204_11915 PF00654 Voltage gated chloride channel KU204_11920 PF00289 Biotin carboxylase, N-terminal domain KU204_11920 PF00364 Biotin-requiring enzyme KU204_11920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU204_11920 PF02785 Biotin carboxylase C-terminal domain KU204_11930 PF07286 Protein of unknown function (DUF1445) KU204_11935 PF03746 LamB/YcsF family KU204_11940 PF01566 Natural resistance-associated macrophage protein KU204_11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_11945 PF03466 LysR substrate binding domain KU204_11960 PF05593 RHS Repeat KU204_11960 PF03527 RHS protein KU204_11965 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU204_11965 PF04717 Type VI secretion system, phage-baseplate injector KU204_11965 PF13296 Putative type VI secretion system Rhs element Vgr KU204_11975 PF13419 Haloacid dehalogenase-like hydrolase KU204_11995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU204_11995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU204_12015 PF07690 Major Facilitator Superfamily KU204_12025 PF03279 Bacterial lipid A biosynthesis acyltransferase KU204_12030 PF00563 EAL domain KU204_12030 PF00990 Diguanylate cyclase, GGDEF domain KU204_12030 PF03707 Bacterial signalling protein N terminal repeat KU204_12035 PF00892 EamA-like transporter family KU204_12040 PF01037 Lrp/AsnC ligand binding domain KU204_12045 PF05190 MutS family domain IV KU204_12045 PF05188 MutS domain II KU204_12045 PF01624 MutS domain I KU204_12045 PF05192 MutS domain III KU204_12045 PF00488 MutS domain V KU204_12055 PF00037 4Fe-4S binding domain KU204_12055 PF11953 Domain of unknown function (DUF3470) KU204_12065 PF01596 O-methyltransferase KU204_12075 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_12080 PF01205 Uncharacterized protein family UPF0029 KU204_12090 PF00664 ABC transporter transmembrane region KU204_12090 PF00005 ABC transporter KU204_12090 PF03412 Peptidase C39 family KU204_12095 PF02321 Outer membrane efflux protein KU204_12100 PF00005 ABC transporter KU204_12100 PF12399 Branched-chain amino acid ATP-binding cassette transporter KU204_12105 PF03968 OstA-like protein KU204_12120 PF00571 CBS domain KU204_12120 PF01380 SIS domain KU204_12125 PF09190 DALR domain KU204_12125 PF01406 tRNA synthetases class I (C) catalytic domain KU204_12150 PF01638 HxlR-like helix-turn-helix KU204_12155 PF07690 Major Facilitator Superfamily KU204_12180 PF03807 NADP oxidoreductase coenzyme F420-dependent KU204_12180 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU204_12190 PF00313 'Cold-shock' DNA-binding domain KU204_12195 PF01810 LysE type translocator KU204_12225 PF02601 Exonuclease VII, large subunit KU204_12225 PF13742 OB-fold nucleic acid binding domain KU204_12260 PF00376 MerR family regulatory protein KU204_12260 PF09278 MerR, DNA binding KU204_12265 PF00403 Heavy-metal-associated domain KU204_12270 PF00403 Heavy-metal-associated domain KU204_12275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_12275 PF03466 LysR substrate binding domain KU204_12280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU204_12280 PF00355 Rieske [2Fe-2S] domain KU204_12285 PF00866 Ring hydroxylating beta subunit KU204_12290 PF00970 Oxidoreductase FAD-binding domain KU204_12290 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_12290 PF00175 Oxidoreductase NAD-binding domain KU204_12295 PF00106 short chain dehydrogenase KU204_12300 PF03594 Benzoate membrane transport protein KU204_12305 PF07690 Major Facilitator Superfamily KU204_12315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KU204_12315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KU204_12320 PF00270 DEAD/DEAH box helicase KU204_12320 PF11898 Domain of unknown function (DUF3418) KU204_12320 PF04408 Helicase associated domain (HA2) KU204_12320 PF00271 Helicase conserved C-terminal domain KU204_12320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KU204_12325 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU204_12325 PF00578 AhpC/TSA family KU204_12345 PF13192 Thioredoxin domain KU204_12345 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_12355 PF00043 Glutathione S-transferase, C-terminal domain KU204_12355 PF02798 Glutathione S-transferase, N-terminal domain KU204_12365 PF02390 Putative methyltransferase KU204_12370 PF13417 Glutathione S-transferase, N-terminal domain KU204_12370 PF00043 Glutathione S-transferase, C-terminal domain KU204_12380 PF13488 Glycine zipper KU204_12380 PF00691 OmpA family KU204_12385 PF01979 Amidohydrolase family KU204_12390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU204_12390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU204_12400 PF10672 S-adenosylmethionine-dependent methyltransferase KU204_12400 PF02926 THUMP domain KU204_12400 PF01170 Putative RNA methylase family UPF0020 KU204_12415 PF00004 ATPase family associated with various cellular activities (AAA) KU204_12415 PF07724 AAA domain (Cdc48 subfamily) KU204_12415 PF17871 AAA lid domain KU204_12415 PF02861 Clp amino terminal domain, pathogenicity island component KU204_12415 PF10431 C-terminal, D2-small domain, of ClpB protein KU204_12430 PF02566 OsmC-like protein KU204_12440 PF00027 Cyclic nucleotide-binding domain KU204_12440 PF13545 Crp-like helix-turn-helix domain KU204_12450 PF00248 Aldo/keto reductase family KU204_12465 PF00709 Adenylosuccinate synthetase KU204_12470 PF13393 Histidyl-tRNA synthetase KU204_12475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU204_12475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU204_12480 PF02272 DHHA1 domain KU204_12480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU204_12480 PF01411 tRNA synthetases class II (A) KU204_12485 PF01842 ACT domain KU204_12485 PF13840 ACT domain KU204_12485 PF00696 Amino acid kinase family KU204_12490 PF02599 Global regulator protein family KU204_12495 PF01351 Ribonuclease HII KU204_12505 PF01292 Prokaryotic cytochrome b561 KU204_12510 PF00962 Adenosine/AMP deaminase KU204_12515 PF13610 DDE domain KU204_12520 PF01636 Phosphotransferase enzyme family KU204_12530 PF13610 DDE domain KU204_12535 PF02796 Helix-turn-helix domain of resolvase KU204_12535 PF00239 Resolvase, N terminal domain KU204_12545 PF13610 DDE domain KU204_12555 PF00239 Resolvase, N terminal domain KU204_12555 PF02796 Helix-turn-helix domain of resolvase KU204_12560 PF13610 DDE domain KU204_12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_12575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_12580 PF00764 Arginosuccinate synthase KU204_12585 PF00360 Phytochrome region KU204_12585 PF00990 Diguanylate cyclase, GGDEF domain KU204_12585 PF01590 GAF domain KU204_12585 PF00563 EAL domain KU204_12590 PF01979 Amidohydrolase family KU204_12595 PF00929 Exonuclease KU204_12605 PF00593 TonB dependent receptor KU204_12605 PF07715 TonB-dependent Receptor Plug Domain KU204_12610 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_12610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU204_12615 PF00005 ABC transporter KU204_12615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU204_12620 PF00528 Binding-protein-dependent transport system inner membrane component KU204_12620 PF12911 N-terminal TM domain of oligopeptide transport permease C KU204_12625 PF00528 Binding-protein-dependent transport system inner membrane component KU204_12630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KU204_12635 PF01464 Transglycosylase SLT domain KU204_12635 PF01476 LysM domain KU204_12635 PF01464 Transglycosylase SLT domain KU204_12635 PF01476 LysM domain KU204_12640 PF00929 Exonuclease KU204_12650 PF09297 NADH pyrophosphatase zinc ribbon domain KU204_12650 PF00293 NUDIX domain KU204_12660 PF04972 BON domain KU204_12665 PF02021 Uncharacterised protein family UPF0102 KU204_12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU204_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_12680 PF03466 LysR substrate binding domain KU204_12685 PF01810 LysE type translocator KU204_12695 PF13411 MerR HTH family regulatory protein KU204_12705 PF01494 FAD binding domain KU204_12710 PF01494 FAD binding domain KU204_12715 PF05195 Aminopeptidase P, N-terminal domain KU204_12715 PF00557 Metallopeptidase family M24 KU204_12755 PF00884 Sulfatase KU204_12755 PF08019 Phosphoethanolamine transferase EptA/EptB KU204_12800 PF01551 Peptidase family M23 KU204_12800 PF01476 LysM domain KU204_12800 PF08525 Opacity-associated protein A N-terminal motif KU204_13130 PF01812 5-formyltetrahydrofolate cyclo-ligase family KU204_13135 PF04355 SmpA / OmlA family KU204_13135 PF00691 OmpA family KU204_13140 PF05658 Head domain of trimeric autotransporter adhesin KU204_13140 PF05662 Coiled stalk of trimeric autotransporter adhesin KU204_13140 PF13018 Extended Signal Peptide of Type V secretion system KU204_13140 PF03895 YadA-like membrane anchor domain KU204_13145 PF02190 ATP-dependent protease La (LON) substrate-binding domain KU204_13145 PF05362 Lon protease (S16) C-terminal proteolytic domain KU204_13145 PF00004 ATPase family associated with various cellular activities (AAA) KU204_13150 PF02590 Predicted SPOUT methyltransferase KU204_13155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KU204_13165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU204_13165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU204_13170 PF04060 Putative Fe-S cluster KU204_13175 PF00633 Helix-hairpin-helix motif KU204_13175 PF00730 HhH-GPD superfamily base excision DNA repair protein KU204_13175 PF10576 Iron-sulfur binding domain of endonuclease III KU204_13185 PF05191 Adenylate kinase, active site lid KU204_13200 PF03717 Penicillin-binding Protein dimerisation domain KU204_13200 PF00905 Penicillin binding protein transpeptidase domain KU204_13215 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU204_13220 PF01730 UreF KU204_13225 PF05194 UreE urease accessory protein, C-terminal domain KU204_13225 PF02814 UreE urease accessory protein, N-terminal domain KU204_13235 PF00547 Urease, gamma subunit KU204_13240 PF01774 UreD urease accessory protein KU204_13255 PF00463 Isocitrate lyase family KU204_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_13260 PF03466 LysR substrate binding domain KU204_13265 PF01595 Cyclin M transmembrane N-terminal domain KU204_13265 PF03471 Transporter associated domain KU204_13265 PF00571 CBS domain KU204_13270 PF03600 Citrate transporter KU204_13285 PF00009 Elongation factor Tu GTP binding domain KU204_13290 PF01507 Phosphoadenosine phosphosulfate reductase family KU204_13305 PF14052 Capsule assembly protein Wzi KU204_13310 PF01336 OB-fold nucleic acid binding domain KU204_13310 PF00152 tRNA synthetases class II (D, K and N) KU204_13325 PF00301 Rubredoxin KU204_13330 PF18113 Rubredoxin binding C-terminal domain KU204_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_13335 PF00561 alpha/beta hydrolase fold KU204_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_13340 PF03466 LysR substrate binding domain KU204_13350 PF17941 Polyphosphate kinase C-terminal domain 1 KU204_13350 PF13090 Polyphosphate kinase C-terminal domain 2 KU204_13350 PF13089 Polyphosphate kinase N-terminal domain KU204_13350 PF02503 Polyphosphate kinase middle domain KU204_13355 PF00912 Transglycosylase KU204_13360 PF01694 Rhomboid family KU204_13370 PF00005 ABC transporter KU204_13375 PF13472 GDSL-like Lipase/Acylhydrolase family KU204_13380 PF00484 Carbonic anhydrase KU204_13385 PF00561 alpha/beta hydrolase fold KU204_13395 PF07715 TonB-dependent Receptor Plug Domain KU204_13395 PF00593 TonB dependent receptor KU204_13400 PF01521 Iron-sulphur cluster biosynthesis KU204_13400 PF01106 NifU-like domain KU204_13410 PF00884 Sulfatase KU204_13415 PF03781 Sulfatase-modifying factor enzyme 1 KU204_13430 PF00291 Pyridoxal-phosphate dependent enzyme KU204_13435 PF01384 Phosphate transporter family KU204_13440 PF02607 B12 binding domain KU204_13440 PF00809 Pterin binding enzyme KU204_13440 PF02574 Homocysteine S-methyltransferase KU204_13440 PF02965 Vitamin B12 dependent methionine synthase, activation domain KU204_13440 PF02310 B12 binding domain KU204_13445 PF02779 Transketolase, pyrimidine binding domain KU204_13445 PF02780 Transketolase, C-terminal domain KU204_13450 PF00456 Transketolase, thiamine diphosphate binding domain KU204_13455 PF07690 Major Facilitator Superfamily KU204_13465 PF03466 LysR substrate binding domain KU204_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_13475 PF01263 Aldose 1-epimerase KU204_13480 PF07690 Major Facilitator Superfamily KU204_13485 PF12833 Helix-turn-helix domain KU204_13485 PF02311 AraC-like ligand binding domain KU204_13490 PF04960 Glutaminase KU204_13495 PF01327 Polypeptide deformylase KU204_13500 PF07690 Major Facilitator Superfamily KU204_13510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU204_13510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU204_13510 PF00205 Thiamine pyrophosphate enzyme, central domain KU204_13515 PF00171 Aldehyde dehydrogenase family KU204_13520 PF01958 Domain of unknown function DUF108 KU204_13520 PF03447 Homoserine dehydrogenase, NAD binding domain KU204_13530 PF12697 Alpha/beta hydrolase family KU204_13540 PF07690 Major Facilitator Superfamily KU204_13545 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_13545 PF14759 Reductase C-terminal KU204_13550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU204_13560 PF00355 Rieske [2Fe-2S] domain KU204_13570 PF00355 Rieske [2Fe-2S] domain KU204_13575 PF09339 IclR helix-turn-helix domain KU204_13575 PF01614 Bacterial transcriptional regulator KU204_13590 PF00378 Enoyl-CoA hydratase/isomerase KU204_13600 PF00535 Glycosyl transferase family 2 KU204_13605 PF01522 Polysaccharide deacetylase KU204_13605 PF14883 Hypothetical glycosyl hydrolase family 13 KU204_13610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_13615 PF07152 YaeQ protein KU204_13620 PF00375 Sodium:dicarboxylate symporter family KU204_13625 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU204_13625 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU204_13635 PF03061 Thioesterase superfamily KU204_13645 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_13650 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_13655 PF13977 BetI-type transcriptional repressor, C-terminal KU204_13655 PF00440 Bacterial regulatory proteins, tetR family KU204_13660 PF00171 Aldehyde dehydrogenase family KU204_13665 PF00732 GMC oxidoreductase KU204_13665 PF05199 GMC oxidoreductase KU204_13670 PF06039 Malate:quinone oxidoreductase (Mqo) KU204_13680 PF02574 Homocysteine S-methyltransferase KU204_13685 PF13520 Amino acid permease KU204_13710 PF01126 Heme oxygenase KU204_13720 PF04575 Protein of unknown function (DUF560) KU204_13730 PF07715 TonB-dependent Receptor Plug Domain KU204_13730 PF00593 TonB dependent receptor KU204_13740 PF04542 Sigma-70 region 2 KU204_13740 PF08281 Sigma-70, region 4 KU204_13750 PF00701 Dihydrodipicolinate synthetase family KU204_13755 PF00083 Sugar (and other) transporter KU204_13775 PF01026 TatD related DNase KU204_13790 PF07693 KAP family P-loop domain KU204_13810 PF00436 Single-strand binding protein family KU204_13865 PF13356 Arm DNA-binding domain KU204_13865 PF00589 Phage integrase family KU204_13970 PF00712 DNA polymerase III beta subunit, N-terminal domain KU204_13970 PF02767 DNA polymerase III beta subunit, central domain KU204_13970 PF02768 DNA polymerase III beta subunit, C-terminal domain KU204_14010 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KU204_14205 PF01695 IstB-like ATP binding protein KU204_14215 PF00145 C-5 cytosine-specific DNA methylase KU204_14295 PF00929 Exonuclease KU204_14370 PF07690 Major Facilitator Superfamily KU204_14375 PF13533 Biotin-lipoyl like KU204_14380 PF03061 Thioesterase superfamily KU204_14385 PF00490 Delta-aminolevulinic acid dehydratase KU204_14390 PF01266 FAD dependent oxidoreductase KU204_14395 PF01370 NAD dependent epimerase/dehydratase family KU204_14395 PF08338 Domain of unknown function (DUF1731) KU204_14415 PF00149 Calcineurin-like phosphoesterase KU204_14415 PF12320 Type 5 capsule protein repressor C-terminal domain KU204_14425 PF01168 Alanine racemase, N-terminal domain KU204_14430 PF00437 Type II/IV secretion system protein KU204_14435 PF00437 Type II/IV secretion system protein KU204_14440 PF01475 Ferric uptake regulator family KU204_14445 PF04355 SmpA / OmlA family KU204_14450 PF03658 RnfH family Ubiquitin KU204_14460 PF01814 Hemerythrin HHE cation binding domain KU204_14465 PF13230 Glutamine amidotransferases class-II KU204_14475 PF00696 Amino acid kinase family KU204_14480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU204_14480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU204_14480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU204_14480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU204_14485 PF00692 dUTPase KU204_14490 PF00580 UvrD/REP helicase N-terminal domain KU204_14490 PF13361 UvrD-like helicase C-terminal domain KU204_14495 PF00691 OmpA family KU204_14495 PF13488 Glycine zipper KU204_14500 PF01553 Acyltransferase KU204_14510 PF03775 Septum formation inhibitor MinC, C-terminal domain KU204_14515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KU204_14520 PF03776 Septum formation topological specificity factor MinE KU204_14540 PF01810 LysE type translocator KU204_14545 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KU204_14545 PF17854 FtsK alpha domain KU204_14545 PF09397 Ftsk gamma domain KU204_14545 PF01580 FtsK/SpoIIIE family KU204_14550 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU204_14555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KU204_14560 PF04377 Arginine-tRNA-protein transferase, C terminus KU204_14560 PF04376 Arginine-tRNA-protein transferase, N terminus KU204_14565 PF00583 Acetyltransferase (GNAT) family KU204_14580 PF00009 Elongation factor Tu GTP binding domain KU204_14580 PF03144 Elongation factor Tu domain 2 KU204_14580 PF03143 Elongation factor Tu C-terminal domain KU204_14585 PF03144 Elongation factor Tu domain 2 KU204_14585 PF00009 Elongation factor Tu GTP binding domain KU204_14585 PF00679 Elongation factor G C-terminus KU204_14585 PF14492 Elongation Factor G, domain II KU204_14585 PF03764 Elongation factor G, domain IV KU204_14590 PF00177 Ribosomal protein S7p/S5e KU204_14595 PF00164 Ribosomal protein S12/S23 KU204_14605 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_14605 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_14610 PF03653 Uncharacterised protein family (UPF0093) KU204_14615 PF02678 Pirin KU204_14615 PF05726 Pirin C-terminal cupin domain KU204_14625 PF00795 Carbon-nitrogen hydrolase KU204_14625 PF02540 NAD synthase KU204_14640 PF00970 Oxidoreductase FAD-binding domain KU204_14640 PF00111 2Fe-2S iron-sulfur cluster binding domain KU204_14640 PF00175 Oxidoreductase NAD-binding domain KU204_14645 PF00171 Aldehyde dehydrogenase family KU204_14650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU204_14650 PF00355 Rieske [2Fe-2S] domain KU204_14655 PF07859 alpha/beta hydrolase fold KU204_14660 PF02028 BCCT, betaine/carnitine/choline family transporter KU204_14665 PF00180 Isocitrate/isopropylmalate dehydrogenase KU204_14670 PF03466 LysR substrate binding domain KU204_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_14690 PF00037 4Fe-4S binding domain KU204_14695 PF01467 Cytidylyltransferase-like KU204_14700 PF01668 SmpB protein KU204_14705 PF03358 NADPH-dependent FMN reductase KU204_14710 PF02578 Multi-copper polyphenol oxidoreductase laccase KU204_14715 PF00849 RNA pseudouridylate synthase KU204_14715 PF01479 S4 domain KU204_14720 PF13525 Outer membrane lipoprotein KU204_14725 PF08278 DNA primase DnaG DnaB-binding KU204_14725 PF01807 CHC2 zinc finger KU204_14725 PF08275 DNA primase catalytic core, N-terminal domain KU204_14725 PF10410 DnaB-helicase binding domain of primase KU204_14730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KU204_14730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KU204_14730 PF01488 Shikimate / quinate 5-dehydrogenase KU204_14740 PF03550 Outer membrane lipoprotein LolB KU204_14745 PF00288 GHMP kinases N terminal domain KU204_14745 PF08544 GHMP kinases C terminal KU204_14770 PF14572 Phosphoribosyl synthetase-associated domain KU204_14770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU204_14775 PF01386 Ribosomal L25p family KU204_14780 PF01195 Peptidyl-tRNA hydrolase KU204_14785 PF02261 Aspartate decarboxylase KU204_14800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU204_14810 PF02581 Thiamine monophosphate synthase KU204_14810 PF03070 TENA/THI-4/PQQC family KU204_14810 PF08543 Phosphomethylpyrimidine kinase KU204_14815 PF04972 BON domain KU204_14815 PF01476 LysM domain KU204_14820 PF00550 Phosphopantetheine attachment site KU204_14830 PF00698 Acyl transferase domain KU204_14835 PF01783 Ribosomal L32p protein family KU204_14840 PF02620 Large ribosomal RNA subunit accumulation protein YceD KU204_14845 PF04315 Elongation factor P hydroxylase KU204_14850 PF01300 Telomere recombination KU204_14855 PF02616 Segregation and condensation protein ScpA KU204_14860 PF04079 Segregation and condensation complex subunit ScpB KU204_14865 PF00849 RNA pseudouridylate synthase KU204_14865 PF01479 S4 domain KU204_14880 PF00155 Aminotransferase class I and II KU204_14885 PF04055 Radical SAM superfamily KU204_14885 PF06968 Biotin and Thiamin Synthesis associated domain KU204_14885 PF00202 Aminotransferase class-III KU204_14890 PF08241 Methyltransferase domain KU204_14890 PF12697 Alpha/beta hydrolase family KU204_14895 PF02358 Trehalose-phosphatase KU204_14900 PF00982 Glycosyltransferase family 20 KU204_14905 PF07690 Major Facilitator Superfamily KU204_14910 PF00210 Ferritin-like domain KU204_14915 PF12826 Helix-hairpin-helix motif KU204_14915 PF01653 NAD-dependent DNA ligase adenylation domain KU204_14915 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KU204_14915 PF00533 BRCA1 C Terminus (BRCT) domain KU204_14915 PF03120 NAD-dependent DNA ligase OB-fold domain KU204_14925 PF06470 SMC proteins Flexible Hinge Domain KU204_14925 PF02463 RecF/RecN/SMC N terminal domain KU204_14935 PF01925 Sulfite exporter TauE/SafE KU204_14945 PF03309 Type III pantothenate kinase KU204_14950 PF02881 SRP54-type protein, helical bundle domain KU204_14950 PF00448 SRP54-type protein, GTPase domain KU204_14950 PF02978 Signal peptide binding domain KU204_14960 PF01207 Dihydrouridine synthase (Dus) KU204_14990 PF00692 dUTPase KU204_15005 PF01048 Phosphorylase superfamily KU204_15010 PF10609 NUBPL iron-transfer P-loop NTPase KU204_15020 PF09334 tRNA synthetases class I (M) KU204_15020 PF01588 Putative tRNA binding domain KU204_15045 PF13533 Biotin-lipoyl like KU204_15050 PF00291 Pyridoxal-phosphate dependent enzyme KU204_15065 PF05552 Conserved TM helix KU204_15080 PF00175 Oxidoreductase NAD-binding domain KU204_15080 PF00970 Oxidoreductase FAD-binding domain KU204_15085 PF03466 LysR substrate binding domain KU204_15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15090 PF00313 'Cold-shock' DNA-binding domain KU204_15100 PF00361 Proton-conducting membrane transporter KU204_15105 PF00361 Proton-conducting membrane transporter KU204_15110 PF00361 Proton-conducting membrane transporter KU204_15110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU204_15115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU204_15120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KU204_15125 PF12838 4Fe-4S dicluster domain KU204_15130 PF00146 NADH dehydrogenase KU204_15135 PF00384 Molybdopterin oxidoreductase KU204_15135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KU204_15135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU204_15140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KU204_15140 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KU204_15140 PF10531 SLBB domain KU204_15150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KU204_15150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KU204_15155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KU204_15160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KU204_15165 PF17151 Periplasmic sensor domain KU204_15165 PF00990 Diguanylate cyclase, GGDEF domain KU204_15175 PF00512 His Kinase A (phospho-acceptor) domain KU204_15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_15175 PF00672 HAMP domain KU204_15180 PF00072 Response regulator receiver domain KU204_15180 PF00486 Transcriptional regulatory protein, C terminal KU204_15190 PF03477 ATP cone domain KU204_15190 PF02867 Ribonucleotide reductase, barrel domain KU204_15190 PF00317 Ribonucleotide reductase, all-alpha domain KU204_15200 PF00268 Ribonucleotide reductase, small chain KU204_15210 PF13756 Stimulus-sensing domain KU204_15210 PF00672 HAMP domain KU204_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_15210 PF00512 His Kinase A (phospho-acceptor) domain KU204_15210 PF13755 Sensor N-terminal transmembrane domain KU204_15280 PF01011 PQQ enzyme repeat KU204_15280 PF13360 PQQ-like domain KU204_15305 PF02567 Phenazine biosynthesis-like protein KU204_15325 PF01613 Flavin reductase like domain KU204_15330 PF01717 Cobalamin-independent synthase, Catalytic domain KU204_15330 PF08267 Cobalamin-independent synthase, N-terminal domain KU204_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15340 PF03466 LysR substrate binding domain KU204_15345 PF01810 LysE type translocator KU204_15355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU204_15355 PF12833 Helix-turn-helix domain KU204_15360 PF01546 Peptidase family M20/M25/M40 KU204_15360 PF07687 Peptidase dimerisation domain KU204_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15370 PF03466 LysR substrate binding domain KU204_15375 PF07690 Major Facilitator Superfamily KU204_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15385 PF03466 LysR substrate binding domain KU204_15390 PF14537 Cytochrome c3 KU204_15390 PF00890 FAD binding domain KU204_15400 PF02515 CoA-transferase family III KU204_15405 PF07690 Major Facilitator Superfamily KU204_15410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_15410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_15410 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15415 PF03466 LysR substrate binding domain KU204_15420 PF00107 Zinc-binding dehydrogenase KU204_15420 PF08240 Alcohol dehydrogenase GroES-like domain KU204_15425 PF00962 Adenosine/AMP deaminase KU204_15450 PF02445 Quinolinate synthetase A protein KU204_15455 PF01960 ArgJ family KU204_15460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU204_15460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU204_15465 PF00893 Small Multidrug Resistance protein KU204_15475 PF05275 Copper resistance protein B precursor (CopB) KU204_15480 PF00394 Multicopper oxidase KU204_15480 PF07732 Multicopper oxidase KU204_15480 PF07731 Multicopper oxidase KU204_15495 PF00834 Ribulose-phosphate 3 epimerase family KU204_15505 PF00756 Putative esterase KU204_15515 PF04445 Putative SAM-dependent methyltransferase KU204_15520 PF00814 Glycoprotease family KU204_15525 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_15530 PF00293 NUDIX domain KU204_15575 PF04715 Anthranilate synthase component I, N terminal region KU204_15575 PF00425 chorismate binding enzyme KU204_15580 PF00155 Aminotransferase class I and II KU204_15585 PF00815 Histidinol dehydrogenase KU204_15590 PF01634 ATP phosphoribosyltransferase KU204_15595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU204_15600 PF01722 BolA-like protein KU204_15605 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KU204_15610 PF04963 Sigma-54 factor, core binding domain KU204_15610 PF04552 Sigma-54, DNA binding domain KU204_15610 PF00309 Sigma-54 factor, Activator interacting domain (AID) KU204_15655 PF00795 Carbon-nitrogen hydrolase KU204_15665 PF01047 MarR family KU204_15670 PF02566 OsmC-like protein KU204_15675 PF00437 Type II/IV secretion system protein KU204_15705 PF01367 5'-3' exonuclease, C-terminal SAM fold KU204_15705 PF01612 3'-5' exonuclease KU204_15705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU204_15705 PF00476 DNA polymerase family A KU204_15710 PF02325 YGGT family KU204_15715 PF03807 NADP oxidoreductase coenzyme F420-dependent KU204_15715 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU204_15720 PF01171 PP-loop family KU204_15720 PF09179 TilS substrate binding domain KU204_15720 PF11734 TilS substrate C-terminal domain KU204_15725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KU204_15730 PF02541 Ppx/GppA phosphatase family KU204_15735 PF00085 Thioredoxin KU204_15740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU204_15740 PF07498 Rho termination factor, N-terminal domain KU204_15740 PF07497 Rho termination factor, RNA-binding domain KU204_15755 PF00216 Bacterial DNA-binding protein KU204_15760 PF03147 Ferredoxin-fold anticodon binding domain KU204_15760 PF03483 B3/4 domain KU204_15760 PF01588 Putative tRNA binding domain KU204_15760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KU204_15760 PF03484 tRNA synthetase B5 domain KU204_15765 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KU204_15765 PF01409 tRNA synthetases class II core domain (F) KU204_15785 PF00453 Ribosomal protein L20 KU204_15790 PF01632 Ribosomal protein L35 KU204_15795 PF07690 Major Facilitator Superfamily KU204_15800 PF09335 SNARE associated Golgi protein KU204_15805 PF02798 Glutathione S-transferase, N-terminal domain KU204_15805 PF00043 Glutathione S-transferase, C-terminal domain KU204_15810 PF00707 Translation initiation factor IF-3, C-terminal domain KU204_15810 PF05198 Translation initiation factor IF-3, N-terminal domain KU204_15815 PF03129 Anticodon binding domain KU204_15815 PF02824 TGS domain KU204_15815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU204_15815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU204_15820 PF00501 AMP-binding enzyme KU204_15820 PF13193 AMP-binding enzyme C-terminal domain KU204_15825 PF04751 Protein of unknown function (DUF615) KU204_15830 PF00381 PTS HPr component phosphorylation site KU204_15835 PF03668 P-loop ATPase protein family KU204_15840 PF02569 Pantoate-beta-alanine ligase KU204_15845 PF02548 Ketopantoate hydroxymethyltransferase KU204_15850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KU204_15855 PF12627 Probable RNA and SrmB- binding site of polymerase A KU204_15855 PF12626 Polymerase A arginine-rich C-terminus KU204_15855 PF01743 Poly A polymerase head domain KU204_15865 PF03819 MazG nucleotide pyrophosphohydrolase domain KU204_15875 PF13291 ACT domain KU204_15875 PF04607 Region found in RelA / SpoT proteins KU204_15875 PF02824 TGS domain KU204_15880 PF05958 tRNA (Uracil-5-)-methyltransferase KU204_15890 PF00291 Pyridoxal-phosphate dependent enzyme KU204_15895 PF00072 Response regulator receiver domain KU204_15895 PF01627 Hpt domain KU204_15895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KU204_15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_15895 PF00672 HAMP domain KU204_15895 PF00512 His Kinase A (phospho-acceptor) domain KU204_15900 PF00378 Enoyl-CoA hydratase/isomerase KU204_15905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU204_15905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU204_15910 PF01261 Xylose isomerase-like TIM barrel KU204_15920 PF00106 short chain dehydrogenase KU204_15925 PF02233 NAD(P) transhydrogenase beta subunit KU204_15930 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KU204_15935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KU204_15935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KU204_15940 PF00892 EamA-like transporter family KU204_15950 PF07690 Major Facilitator Superfamily KU204_15955 PF01207 Dihydrouridine synthase (Dus) KU204_15965 PF03466 LysR substrate binding domain KU204_15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_15975 PF00899 ThiF family KU204_15985 PF00330 Aconitase family (aconitate hydratase) KU204_15985 PF00694 Aconitase C-terminal domain KU204_15990 PF01026 TatD related DNase KU204_16005 PF00009 Elongation factor Tu GTP binding domain KU204_16005 PF03144 Elongation factor Tu domain 2 KU204_16005 PF16658 Class II release factor RF3, C-terminal domain KU204_16025 PF00990 Diguanylate cyclase, GGDEF domain KU204_16025 PF00563 EAL domain KU204_16025 PF03707 Bacterial signalling protein N terminal repeat KU204_16030 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KU204_16030 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KU204_16035 PF10369 Small subunit of acetolactate synthase KU204_16040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU204_16040 PF00205 Thiamine pyrophosphate enzyme, central domain KU204_16040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU204_16050 PF08264 Anticodon-binding domain of tRNA KU204_16050 PF00133 tRNA synthetases class I (I, L, M and V) KU204_16050 PF13603 Leucyl-tRNA synthetase, Domain 2 KU204_16050 PF09334 tRNA synthetases class I (M) KU204_16065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU204_16070 PF12704 MacB-like periplasmic core domain KU204_16070 PF00005 ABC transporter KU204_16070 PF02687 FtsX-like permease family KU204_16075 PF02321 Outer membrane efflux protein KU204_16090 PF00929 Exonuclease KU204_16095 PF03193 RsgA GTPase KU204_16105 PF00462 Glutaredoxin KU204_16110 PF02556 Preprotein translocase subunit SecB KU204_16125 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_16125 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_16140 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_16140 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_16150 PF04820 Tryptophan halogenase KU204_16170 PF00221 Aromatic amino acid lyase KU204_16185 PF00501 AMP-binding enzyme KU204_16185 PF13193 AMP-binding enzyme C-terminal domain KU204_16195 PF00550 Phosphopantetheine attachment site KU204_16200 PF00550 Phosphopantetheine attachment site KU204_16215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KU204_16215 PF01926 50S ribosome-binding GTPase KU204_16220 PF13360 PQQ-like domain KU204_16230 PF13393 Histidyl-tRNA synthetase KU204_16230 PF03129 Anticodon binding domain KU204_16235 PF04551 GcpE protein KU204_16240 PF13464 Domain of unknown function (DUF4115) KU204_16250 PF04055 Radical SAM superfamily KU204_16255 PF00334 Nucleoside diphosphate kinase KU204_16260 PF04384 Iron-sulphur cluster assembly KU204_16265 PF01569 PAP2 superfamily KU204_16270 PF13439 Glycosyltransferase Family 4 KU204_16270 PF00534 Glycosyl transferases group 1 KU204_16275 PF03572 Peptidase family S41 KU204_16275 PF11818 C-terminal domain of tail specific protease (DUF3340) KU204_16275 PF00595 PDZ domain KU204_16275 PF17804 Tail specific protease N-terminal domain KU204_16280 PF00933 Glycosyl hydrolase family 3 N terminal domain KU204_16290 PF00561 alpha/beta hydrolase fold KU204_16295 PF00171 Aldehyde dehydrogenase family KU204_16300 PF00171 Aldehyde dehydrogenase family KU204_16305 PF01202 Shikimate kinase KU204_16310 PF02447 GntP family permease KU204_16315 PF01081 KDPG and KHG aldolase KU204_16320 PF00920 Dehydratase family KU204_16330 PF00871 Acetokinase family KU204_16335 PF07085 DRTGG domain KU204_16335 PF01515 Phosphate acetyl/butaryl transferase KU204_16340 PF05683 Fumarase C-terminus KU204_16340 PF05681 Fumarate hydratase (Fumerase) KU204_16355 PF06689 ClpX C4-type zinc finger KU204_16355 PF10431 C-terminal, D2-small domain, of ClpB protein KU204_16355 PF07724 AAA domain (Cdc48 subfamily) KU204_16360 PF00574 Clp protease KU204_16365 PF05697 Bacterial trigger factor protein (TF) KU204_16365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_16365 PF05698 Bacterial trigger factor protein (TF) C-terminus KU204_16370 PF07715 TonB-dependent Receptor Plug Domain KU204_16370 PF00593 TonB dependent receptor KU204_16375 PF13640 2OG-Fe(II) oxygenase superfamily KU204_16375 PF18331 PKHD-type hydroxylase C-terminal domain KU204_16380 PF00682 HMGL-like KU204_16380 PF08502 LeuA allosteric (dimerisation) domain KU204_16385 PF00561 alpha/beta hydrolase fold KU204_16390 PF00561 alpha/beta hydrolase fold KU204_16390 PF07021 Methionine biosynthesis protein MetW KU204_16400 PF01725 Ham1 family KU204_16410 PF02416 mttA/Hcf106 family KU204_16415 PF02416 mttA/Hcf106 family KU204_16420 PF00902 Sec-independent protein translocase protein (TatC) KU204_16440 PF01790 Prolipoprotein diacylglyceryl transferase KU204_16455 PF00303 Thymidylate synthase KU204_16460 PF00186 Dihydrofolate reductase KU204_16470 PF01625 Peptide methionine sulfoxide reductase KU204_16480 PF01618 MotA/TolQ/ExbB proton channel family KU204_16490 PF00551 Formyl transferase KU204_16490 PF01842 ACT domain KU204_16500 PF00171 Aldehyde dehydrogenase family KU204_16505 PF00830 Ribosomal L28 family KU204_16510 PF00471 Ribosomal protein L33 KU204_16515 PF00999 Sodium/hydrogen exchanger family KU204_16515 PF02254 TrkA-N domain KU204_16535 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KU204_16540 PF00580 UvrD/REP helicase N-terminal domain KU204_16540 PF13361 UvrD-like helicase C-terminal domain KU204_16555 PF08272 Topoisomerase I zinc-ribbon-like KU204_16555 PF01131 DNA topoisomerase KU204_16555 PF01751 Toprim domain KU204_16555 PF01396 Topoisomerase DNA binding C4 zinc finger KU204_16565 PF01638 HxlR-like helix-turn-helix KU204_16570 PF08240 Alcohol dehydrogenase GroES-like domain KU204_16570 PF00107 Zinc-binding dehydrogenase KU204_16575 PF04102 SlyX KU204_16580 PF00005 ABC transporter KU204_16580 PF16326 ABC transporter C-terminal domain KU204_16580 PF12848 ABC transporter KU204_16585 PF01810 LysE type translocator KU204_16590 PF03279 Bacterial lipid A biosynthesis acyltransferase KU204_16600 PF00375 Sodium:dicarboxylate symporter family KU204_16610 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU204_16610 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU204_16630 PF01416 tRNA pseudouridine synthase KU204_16640 PF01176 Translation initiation factor 1A / IF-1 KU204_16655 PF00180 Isocitrate/isopropylmalate dehydrogenase KU204_16665 PF00694 Aconitase C-terminal domain KU204_16670 PF00330 Aconitase family (aconitate hydratase) KU204_16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_16680 PF03466 LysR substrate binding domain KU204_16700 PF00293 NUDIX domain KU204_16705 PF01590 GAF domain KU204_16705 PF02896 PEP-utilising enzyme, TIM barrel domain KU204_16705 PF00391 PEP-utilising enzyme, mobile domain KU204_16705 PF05524 PEP-utilising enzyme, N-terminal KU204_16710 PF00141 Peroxidase KU204_16715 PF12706 Beta-lactamase superfamily domain KU204_16720 PF03466 LysR substrate binding domain KU204_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_16730 PF02798 Glutathione S-transferase, N-terminal domain KU204_16735 PF08279 HTH domain KU204_16735 PF13280 WYL domain KU204_16740 PF13419 Haloacid dehalogenase-like hydrolase KU204_16745 PF00849 RNA pseudouridylate synthase KU204_16745 PF01479 S4 domain KU204_16750 PF00575 S1 RNA binding domain KU204_16750 PF10150 Ribonuclease E/G family KU204_16750 PF12111 Polyribonucleotide phosphorylase C terminal KU204_16755 PF00501 AMP-binding enzyme KU204_16755 PF13193 AMP-binding enzyme C-terminal domain KU204_16770 PF03466 LysR substrate binding domain KU204_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU204_16775 PF00106 short chain dehydrogenase KU204_16780 PF06969 HemN C-terminal domain KU204_16780 PF04055 Radical SAM superfamily KU204_16790 PF01554 MatE KU204_16795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_16795 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_16795 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU204_16800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_16800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU204_16805 PF03109 ABC1 family KU204_16810 PF01197 Ribosomal protein L31 KU204_16825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KU204_16845 PF03884 DNA gyrase inhibitor YacG KU204_16850 PF00753 Metallo-beta-lactamase superfamily KU204_16855 PF00762 Ferrochelatase KU204_16865 PF01177 Asp/Glu/Hydantoin racemase KU204_16880 PF01206 Sulfurtransferase TusA KU204_16885 PF00571 CBS domain KU204_16885 PF03471 Transporter associated domain KU204_16890 PF00795 Carbon-nitrogen hydrolase KU204_16895 PF01588 Putative tRNA binding domain KU204_16905 PF08334 Type II secretion system (T2SS), protein G KU204_16905 PF07963 Prokaryotic N-terminal methylation motif KU204_16910 PF00482 Type II secretion system (T2SS), protein F KU204_16915 PF00271 Helicase conserved C-terminal domain KU204_16915 PF18074 Primosomal protein N C-terminal domain KU204_16915 PF17764 3′ DNA-binding domain (3′BD) KU204_16915 PF00270 DEAD/DEAH box helicase KU204_16915 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KU204_16920 PF02254 TrkA-N domain KU204_16920 PF00999 Sodium/hydrogen exchanger family KU204_16925 PF01430 Hsp33 protein KU204_16935 PF00226 DnaJ domain KU204_16935 PF01556 DnaJ C terminal domain KU204_16945 PF01544 CorA-like Mg2+ transporter protein KU204_16950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KU204_16950 PF00013 KH domain KU204_16950 PF01138 3' exoribonuclease family, domain 1 KU204_16950 PF03725 3' exoribonuclease family, domain 2 KU204_16950 PF00575 S1 RNA binding domain KU204_16955 PF00312 Ribosomal protein S15 KU204_16960 PF00144 Beta-lactamase KU204_16965 PF13538 UvrD-like helicase C-terminal domain KU204_16970 PF00580 UvrD/REP helicase N-terminal domain KU204_16970 PF13361 UvrD-like helicase C-terminal domain KU204_16970 PF12705 PD-(D/E)XK nuclease superfamily KU204_16975 PF17946 RecC C-terminal domain KU204_16985 PF03976 Polyphosphate kinase 2 (PPK2) KU204_16995 PF01209 ubiE/COQ5 methyltransferase family KU204_17005 PF03109 ABC1 family KU204_17010 PF01494 FAD binding domain KU204_17015 PF01502 Phosphoribosyl-AMP cyclohydrolase KU204_17030 PF00361 Proton-conducting membrane transporter KU204_17030 PF13244 Domain of unknown function (DUF4040) KU204_17030 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KU204_17030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU204_17035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU204_17040 PF00361 Proton-conducting membrane transporter KU204_17045 PF01899 Na+/H+ ion antiporter subunit KU204_17050 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KU204_17055 PF03334 Na+/H+ antiporter subunit KU204_17060 PF02033 Ribosome-binding factor A KU204_17065 PF00009 Elongation factor Tu GTP binding domain KU204_17065 PF11987 Translation-initiation factor 2 KU204_17065 PF08364 Bacterial translation initiation factor IF-2 associated region KU204_17065 PF04760 Translation initiation factor IF-2, N-terminal region KU204_17070 PF00575 S1 RNA binding domain KU204_17070 PF13184 NusA-like KH domain KU204_17070 PF08529 NusA N-terminal domain KU204_17075 PF02576 RimP N-terminal domain KU204_17075 PF17384 RimP C-terminal SH3 domain KU204_17095 PF03840 Preprotein translocase SecG subunit KU204_17100 PF00121 Triosephosphate isomerase KU204_17105 PF00437 Type II/IV secretion system protein KU204_17105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU204_17110 PF00482 Type II secretion system (T2SS), protein F KU204_17115 PF01478 Type IV leader peptidase family KU204_17115 PF06750 Bacterial Peptidase A24 N-terminal domain KU204_17120 PF01121 Dephospho-CoA kinase KU204_17130 PF00588 SpoU rRNA Methylase family KU204_17130 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU204_17135 PF06865 Pyrimidine/purine nucleoside phosphorylase KU204_17145 PF02463 RecF/RecN/SMC N terminal domain KU204_17150 PF02622 Uncharacterized ACR, COG1678 KU204_17155 PF03652 Holliday junction resolvase KU204_17160 PF13533 Biotin-lipoyl like KU204_17185 PF02805 Metal binding domain of Ada KU204_17185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU204_17185 PF12833 Helix-turn-helix domain KU204_17185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU204_17190 PF01066 CDP-alcohol phosphatidyltransferase KU204_17200 PF01541 GIY-YIG catalytic domain KU204_17200 PF02151 UvrB/uvrC motif KU204_17200 PF08459 UvrC Helix-hairpin-helix N-terminal KU204_17220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU204_17220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU204_17220 PF00378 Enoyl-CoA hydratase/isomerase KU204_17225 PF02803 Thiolase, C-terminal domain KU204_17225 PF00108 Thiolase, N-terminal domain KU204_17245 PF00376 MerR family regulatory protein KU204_17245 PF09278 MerR, DNA binding KU204_17255 PF01323 DSBA-like thioredoxin domain KU204_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_17270 PF00183 Hsp90 protein KU204_17285 PF13726 Na+-H+ antiporter family KU204_17285 PF03553 Na+/H+ antiporter family KU204_17290 PF00561 alpha/beta hydrolase fold KU204_17310 PF04998 RNA polymerase Rpb1, domain 5 KU204_17310 PF04997 RNA polymerase Rpb1, domain 1 KU204_17310 PF00623 RNA polymerase Rpb1, domain 2 KU204_17310 PF04983 RNA polymerase Rpb1, domain 3 KU204_17310 PF05000 RNA polymerase Rpb1, domain 4 KU204_17315 PF04563 RNA polymerase beta subunit KU204_17315 PF04561 RNA polymerase Rpb2, domain 2 KU204_17315 PF04565 RNA polymerase Rpb2, domain 3 KU204_17315 PF10385 RNA polymerase beta subunit external 1 domain KU204_17315 PF00562 RNA polymerase Rpb2, domain 6 KU204_17315 PF04560 RNA polymerase Rpb2, domain 7 KU204_17320 PF00542 Ribosomal protein L7/L12 C-terminal domain KU204_17320 PF16320 Ribosomal protein L7/L12 dimerisation domain KU204_17325 PF00466 Ribosomal protein L10 KU204_17330 PF00687 Ribosomal protein L1p/L10e family KU204_17335 PF00298 Ribosomal protein L11, RNA binding domain KU204_17335 PF03946 Ribosomal protein L11, N-terminal domain KU204_17340 PF00467 KOW motif KU204_17340 PF02357 Transcription termination factor nusG KU204_17345 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KU204_17355 PF03144 Elongation factor Tu domain 2 KU204_17355 PF00009 Elongation factor Tu GTP binding domain KU204_17355 PF03143 Elongation factor Tu C-terminal domain KU204_17380 PF04715 Anthranilate synthase component I, N terminal region KU204_17380 PF00425 chorismate binding enzyme KU204_17385 PF13419 Haloacid dehalogenase-like hydrolase KU204_17390 PF00498 FHA domain KU204_17390 PF12401 Protein of unknown function (DUF2662) KU204_17395 PF03958 Bacterial type II/III secretion system short domain KU204_17395 PF00263 Bacterial type II and III secretion system protein KU204_17410 PF00816 H-NS histone family KU204_17435 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KU204_17435 PF03900 Porphobilinogen deaminase, C-terminal domain KU204_17440 PF00072 Response regulator receiver domain KU204_17440 PF04397 LytTr DNA-binding domain KU204_17445 PF07694 5TMR of 5TMR-LYT KU204_17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_17445 PF06580 Histidine kinase KU204_17450 PF14698 Argininosuccinate lyase C-terminal KU204_17450 PF00206 Lyase KU204_17455 PF04362 Bacterial Fe(2+) trafficking KU204_17460 PF01895 PhoU domain KU204_17465 PF02321 Outer membrane efflux protein KU204_17470 PF00892 EamA-like transporter family KU204_17485 PF01964 Radical SAM ThiC family KU204_17485 PF13667 ThiC-associated domain KU204_17490 PF00293 NUDIX domain KU204_17495 PF00149 Calcineurin-like phosphoesterase KU204_17500 PF01258 Prokaryotic dksA/traR C4-type zinc finger KU204_17505 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU204_17510 PF01098 Cell cycle protein KU204_17515 PF02875 Mur ligase family, glutamate ligase domain KU204_17515 PF08245 Mur ligase middle domain KU204_17525 PF02421 Ferrous iron transport protein B KU204_17525 PF07670 Nucleoside recognition KU204_17525 PF07664 Ferrous iron transport protein B C terminus KU204_17535 PF02899 Phage integrase, N-terminal SAM-like domain KU204_17535 PF00589 Phage integrase family KU204_17540 PF10411 Disulfide bond isomerase protein N-terminus KU204_17540 PF13098 Thioredoxin-like domain KU204_17545 PF01842 ACT domain KU204_17545 PF00742 Homoserine dehydrogenase KU204_17545 PF03447 Homoserine dehydrogenase, NAD binding domain KU204_17550 PF00291 Pyridoxal-phosphate dependent enzyme KU204_17555 PF00768 D-alanyl-D-alanine carboxypeptidase KU204_17560 PF00196 Bacterial regulatory proteins, luxR family KU204_17560 PF00072 Response regulator receiver domain KU204_17565 PF00512 His Kinase A (phospho-acceptor) domain KU204_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU204_17570 PF00072 Response regulator receiver domain KU204_17570 PF00158 Sigma-54 interaction domain KU204_17570 PF02954 Bacterial regulatory protein, Fis family KU204_17575 PF00595 PDZ domain KU204_17575 PF03572 Peptidase family S41 KU204_17580 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KU204_17580 PF01676 Metalloenzyme superfamily KU204_17585 PF03739 Lipopolysaccharide export system permease LptF/LptG KU204_17595 PF00883 Cytosol aminopeptidase family, catalytic domain KU204_17595 PF02789 Cytosol aminopeptidase family, N-terminal domain KU204_17615 PF00677 Lumazine binding domain KU204_17625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU204_17625 PF01872 RibD C-terminal domain KU204_17630 PF03477 ATP cone domain KU204_17635 PF00909 Ammonium Transporter Family KU204_17640 PF00543 Nitrogen regulatory protein P-II KU204_17650 PF01078 Magnesium chelatase, subunit ChlI KU204_17650 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU204_17660 PF01636 Phosphotransferase enzyme family KU204_17665 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KU204_17685 PF02909 Tetracyclin repressor-like, C-terminal domain KU204_17685 PF00440 Bacterial regulatory proteins, tetR family KU204_17690 PF07690 Major Facilitator Superfamily KU204_17705 PF00905 Penicillin binding protein transpeptidase domain KU204_17730 PF01740 STAS domain KU204_17730 PF00916 Sulfate permease family KU204_17735 PF00582 Universal stress protein family KU204_17765 PF00665 Integrase core domain KU204_17775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU204_17775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU204_17775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU204_17775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU204_17780 PF00809 Pterin binding enzyme KU204_17795 PF00665 Integrase core domain KU204_17820 PF02899 Phage integrase, N-terminal SAM-like domain KU204_17820 PF00589 Phage integrase family KU204_17855 PF00905 Penicillin binding protein transpeptidase domain KU204_17880 PF01740 STAS domain KU204_17880 PF00916 Sulfate permease family KU204_17885 PF00582 Universal stress protein family KU204_17905 PF00665 Integrase core domain KU204_17915 PF01078 Magnesium chelatase, subunit ChlI KU204_17915 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU204_17920 PF00155 Aminotransferase class I and II KU204_17920 PF00392 Bacterial regulatory proteins, gntR family KU204_17930 PF00701 Dihydrodipicolinate synthetase family KU204_17940 PF03573 outer membrane porin, OprD family KU204_17945 PF00719 Inorganic pyrophosphatase KU204_17960 PF00501 AMP-binding enzyme KU204_17960 PF13193 AMP-binding enzyme C-terminal domain KU204_17965 PF03989 DNA gyrase C-terminal domain, beta-propeller KU204_17965 PF00521 DNA gyrase/topoisomerase IV, subunit A KU204_17970 PF07690 Major Facilitator Superfamily KU204_17975 PF03458 UPF0126 domain KU204_17980 PF02810 SEC-C motif KU204_17985 PF03471 Transporter associated domain KU204_17985 PF03741 Integral membrane protein TerC family KU204_17990 PF03641 Possible lysine decarboxylase KU204_17995 PF07690 Major Facilitator Superfamily KU204_18005 PF00817 impB/mucB/samB family KU204_18005 PF11799 impB/mucB/samB family C-terminal domain KU204_18005 PF11798 IMS family HHH motif KU204_18020 PF11842 Domain of unknown function (DUF3362) KU204_18020 PF04055 Radical SAM superfamily KU204_18020 PF08497 Radical SAM N-terminal KU204_18040 PF03358 NADPH-dependent FMN reductase KU204_18050 PF00291 Pyridoxal-phosphate dependent enzyme KU204_18085 PF00440 Bacterial regulatory proteins, tetR family KU204_18110 PF01327 Polypeptide deformylase KU204_18120 PF02481 DNA recombination-mediator protein A KU204_18120 PF17782 DprA winged helix domain KU204_18125 PF01300 Telomere recombination KU204_18130 PF00892 EamA-like transporter family KU204_18135 PF00440 Bacterial regulatory proteins, tetR family KU204_18140 PF07690 Major Facilitator Superfamily KU204_18150 PF00255 Glutathione peroxidase KU204_18160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KU204_18165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU204_18165 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU204_18170 PF00231 ATP synthase KU204_18175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU204_18175 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU204_18175 PF00306 ATP synthase alpha/beta chain, C terminal domain KU204_18180 PF00213 ATP synthase delta (OSCP) subunit KU204_18185 PF00430 ATP synthase B/B' CF(0) KU204_18190 PF00137 ATP synthase subunit C KU204_18195 PF00119 ATP synthase A chain KU204_18215 PF00005 ABC transporter KU204_18220 PF00950 ABC 3 transport family KU204_18225 PF01810 LysE type translocator KU204_18230 PF04261 Dyp-type peroxidase family KU204_18240 PF03949 Malic enzyme, NAD binding domain KU204_18240 PF00390 Malic enzyme, N-terminal domain KU204_18245 PF05746 DALR anticodon binding domain KU204_18245 PF03485 Arginyl tRNA synthetase N terminal domain KU204_18245 PF00750 tRNA synthetases class I (R) KU204_18265 PF02678 Pirin KU204_18265 PF05726 Pirin C-terminal cupin domain KU204_18275 PF03551 Transcriptional regulator PadR-like family KU204_18280 PF13427 Domain of unknown function (DUF4111) KU204_18280 PF01909 Nucleotidyltransferase domain KU204_18285 PF00117 Glutamine amidotransferase class-I KU204_18285 PF00958 GMP synthase C terminal domain KU204_18285 PF02540 NAD synthase KU204_18290 PF04286 Protein of unknown function (DUF445) KU204_18295 PF07681 DoxX KU204_18300 PF09335 SNARE associated Golgi protein KU204_18315 PF13614 AAA domain KU204_18325 PF01722 BolA-like protein KU204_18340 PF01648 4'-phosphopantetheinyl transferase superfamily KU204_18345 PF12697 Alpha/beta hydrolase family KU204_18365 PF16197 Ketoacyl-synthetase C-terminal extension KU204_18365 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_18365 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_18365 PF08242 Methyltransferase domain KU204_18365 PF00550 Phosphopantetheine attachment site KU204_18365 PF14765 Polyketide synthase dehydratase KU204_18365 PF00975 Thioesterase domain KU204_18370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_18370 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_18370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_18375 PF00501 AMP-binding enzyme KU204_18380 PF00196 Bacterial regulatory proteins, luxR family KU204_18380 PF03472 Autoinducer binding domain KU204_18390 PF00765 Autoinducer synthase KU204_18395 PF07690 Major Facilitator Superfamily KU204_18395 PF00083 Sugar (and other) transporter KU204_18400 PF00378 Enoyl-CoA hydratase/isomerase KU204_18405 PF00378 Enoyl-CoA hydratase/isomerase KU204_18410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU204_18410 PF02770 Acyl-CoA dehydrogenase, middle domain KU204_18410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU204_18415 PF13193 AMP-binding enzyme C-terminal domain KU204_18415 PF00501 AMP-binding enzyme KU204_18420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU204_18420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU204_18425 PF00171 Aldehyde dehydrogenase family KU204_18435 PF00324 Amino acid permease KU204_18440 PF00324 Amino acid permease KU204_18445 PF01042 Endoribonuclease L-PSP KU204_18450 PF00842 Alanine racemase, C-terminal domain KU204_18450 PF01168 Alanine racemase, N-terminal domain KU204_18455 PF01266 FAD dependent oxidoreductase KU204_18460 PF01037 Lrp/AsnC ligand binding domain KU204_18470 PF00593 TonB dependent receptor KU204_18470 PF07715 TonB-dependent Receptor Plug Domain KU204_18485 PF00849 RNA pseudouridylate synthase KU204_18500 PF00440 Bacterial regulatory proteins, tetR family KU204_18500 PF08361 MAATS-type transcriptional repressor, C-terminal region KU204_18510 PF00109 Beta-ketoacyl synthase, N-terminal domain KU204_18510 PF02801 Beta-ketoacyl synthase, C-terminal domain KU204_18545 PF00694 Aconitase C-terminal domain KU204_18545 PF00330 Aconitase family (aconitate hydratase) KU204_18550 PF00285 Citrate synthase, C-terminal domain KU204_18560 PF00392 Bacterial regulatory proteins, gntR family KU204_18560 PF07729 FCD domain KU204_18570 PF00155 Aminotransferase class I and II KU204_18575 PF09330 D-lactate dehydrogenase, membrane binding KU204_18575 PF01565 FAD binding domain KU204_18580 PF01070 FMN-dependent dehydrogenase KU204_18585 PF07729 FCD domain KU204_18585 PF00392 Bacterial regulatory proteins, gntR family KU204_18590 PF02652 L-lactate permease KU204_18595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU204_18595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU204_18595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU204_18595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU204_18600 PF16363 GDP-mannose 4,6 dehydratase KU204_18605 PF00342 Phosphoglucose isomerase KU204_18610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU204_18610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU204_18610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU204_18615 PF00483 Nucleotidyl transferase KU204_18620 PF02397 Bacterial sugar transferase KU204_18625 PF00535 Glycosyl transferase family 2 KU204_18630 PF00534 Glycosyl transferases group 1 KU204_18635 PF00535 Glycosyl transferase family 2 KU204_18650 PF02350 UDP-N-acetylglucosamine 2-epimerase KU204_18655 PF12464 Maltose acetyltransferase KU204_18655 PF14602 Hexapeptide repeat of succinyl-transferase KU204_18655 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_18665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU204_18670 PF00132 Bacterial transferase hexapeptide (six repeats) KU204_18675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KU204_18675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KU204_18680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU204_18680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU204_18680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU204_18685 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KU204_18685 PF10531 SLBB domain KU204_18685 PF02563 Polysaccharide biosynthesis/export protein KU204_18690 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU204_18695 PF02706 Chain length determinant protein KU204_18695 PF13807 G-rich domain on putative tyrosine kinase KU204_18695 PF13614 AAA domain KU204_18700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_18700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU204_18705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_18705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU204_18710 PF03023 Lipid II flippase MurJ KU204_18715 PF01510 N-acetylmuramoyl-L-alanine amidase KU204_18720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KU204_18720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KU204_18735 PF01138 3' exoribonuclease family, domain 1 KU204_18735 PF03725 3' exoribonuclease family, domain 2 KU204_18740 PF00487 Fatty acid desaturase KU204_18745 PF00175 Oxidoreductase NAD-binding domain KU204_18750 PF00440 Bacterial regulatory proteins, tetR family KU204_18755 PF08360 QacR-like protein, C-terminal region KU204_18755 PF00440 Bacterial regulatory proteins, tetR family KU204_18760 PF01323 DSBA-like thioredoxin domain KU204_18770 PF13419 Haloacid dehalogenase-like hydrolase KU204_18775 PF00106 short chain dehydrogenase KU204_18790 PF00583 Acetyltransferase (GNAT) family KU204_18790 PF00696 Amino acid kinase family KU204_18795 PF09084 NMT1/THI5 like KU204_18800 PF09084 NMT1/THI5 like KU204_18805 PF00296 Luciferase-like monooxygenase KU204_18810 PF00528 Binding-protein-dependent transport system inner membrane component KU204_18815 PF00005 ABC transporter KU204_18820 PF00440 Bacterial regulatory proteins, tetR family KU204_18820 PF08362 YcdC-like protein, C-terminal region KU204_18825 PF01048 Phosphorylase superfamily KU204_18835 PF06574 FAD synthetase KU204_18835 PF01687 Riboflavin kinase KU204_18840 PF08264 Anticodon-binding domain of tRNA KU204_18840 PF00133 tRNA synthetases class I (I, L, M and V) KU204_18840 PF06827 Zinc finger found in FPG and IleRS KU204_18845 PF01252 Signal peptidase (SPase) II KU204_18850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU204_18890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU204_18895 PF07859 alpha/beta hydrolase fold KU204_18920 PF01025 GrpE KU204_18925 PF00012 Hsp70 protein KU204_18945 PF13406 Transglycosylase SLT domain KU204_18950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KU204_18950 PF02222 ATP-grasp domain KU204_18955 PF00731 AIR carboxylase KU204_18965 PF08245 Mur ligase middle domain KU204_18965 PF02875 Mur ligase family, glutamate ligase domain KU204_18965 PF01225 Mur ligase family, catalytic domain KU204_18975 PF01569 PAP2 superfamily KU204_18980 PF03741 Integral membrane protein TerC family KU204_18990 PF03738 Glutathionylspermidine synthase preATP-grasp KU204_18995 PF00355 Rieske [2Fe-2S] domain KU204_19000 PF01979 Amidohydrolase family KU204_19005 PF00156 Phosphoribosyl transferase domain KU204_19015 PF13098 Thioredoxin-like domain KU204_19015 PF10411 Disulfide bond isomerase protein N-terminus KU204_19020 PF01545 Cation efflux family KU204_19020 PF16916 Dimerisation domain of Zinc Transporter KU204_19025 PF02583 Metal-sensitive transcriptional repressor KU204_19030 PF01926 50S ribosome-binding GTPase KU204_19030 PF10396 GTP-binding protein TrmE N-terminus KU204_19030 PF12631 MnmE helical domain KU204_19035 PF02096 60Kd inner membrane protein KU204_19035 PF14849 YidC periplasmic domain KU204_19040 PF01809 Putative membrane protein insertion efficiency factor KU204_19045 PF00825 Ribonuclease P KU204_19050 PF00468 Ribosomal protein L34 KU204_19105 PF00565 Staphylococcal nuclease homologue KU204_19110 PF00816 H-NS histone family KU204_19170 PF13614 AAA domain KU204_19175 PF17762 HTH domain found in ParB protein KU204_19175 PF02195 ParB-like nuclease domain KU204_19190 PF05816 Toxic anion resistance protein (TelA) KU204_19290 PF00226 DnaJ domain KU204_19290 PF01556 DnaJ C terminal domain KU204_19290 PF00684 DnaJ central domain KU204_19325 PF18340 DNA relaxase TraI 2B/2B-like domain KU204_19325 PF08751 TrwC relaxase KU204_19325 PF07057 DNA helicase TraI KU204_19325 PF18272 single-stranded DNA binding TraI N-terminal subdomain KU204_19365 PF02796 Helix-turn-helix domain of resolvase KU204_19365 PF00239 Resolvase, N terminal domain KU204_19380 PF01464 Transglycosylase SLT domain KU204_19415 PF10411 Disulfide bond isomerase protein N-terminus KU204_19415 PF13098 Thioredoxin-like domain KU204_19450 PF06834 TraU protein KU204_19460 PF06986 Type-1V conjugative transfer system mating pair stabilisation KU204_19475 PF06122 Conjugative relaxosome accessory transposon protein KU204_19495 PF13438 Domain of unknown function (DUF4113) KU204_19495 PF11799 impB/mucB/samB family C-terminal domain KU204_19495 PF00817 impB/mucB/samB family KU204_19565 PF00593 TonB dependent receptor KU204_19565 PF07715 TonB-dependent Receptor Plug Domain