locus-tag class description KU217_00005 PF00308 Bacterial dnaA protein KU217_00005 PF08299 Bacterial dnaA protein helix-turn-helix KU217_00005 PF11638 DnaA N-terminal domain KU217_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KU217_00010 PF02767 DNA polymerase III beta subunit, central domain KU217_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KU217_00015 PF02463 RecF/RecN/SMC N terminal domain KU217_00020 PF01751 Toprim domain KU217_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KU217_00020 PF00204 DNA gyrase B KU217_00020 PF18053 DNA gyrase B subunit insert domain KU217_00030 PF09335 SNARE associated Golgi protein KU217_00035 PF12848 ABC transporter KU217_00035 PF00005 ABC transporter KU217_00055 PF01521 Iron-sulphur cluster biosynthesis KU217_00060 PF00561 alpha/beta hydrolase fold KU217_00065 PF03702 Anhydro-N-acetylmuramic acid kinase KU217_00070 PF00579 tRNA synthetases class I (W and Y) KU217_00110 PF00209 Sodium:neurotransmitter symporter family KU217_00120 PF01189 16S rRNA methyltransferase RsmB/F KU217_00120 PF01029 NusB family KU217_00125 PF02911 Formyl transferase, C-terminal domain KU217_00125 PF00551 Formyl transferase KU217_00130 PF00920 Dehydratase family KU217_00145 PF03466 LysR substrate binding domain KU217_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_00150 PF00860 Permease family KU217_00155 PF00311 Phosphoenolpyruvate carboxylase KU217_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region KU217_00160 PF00440 Bacterial regulatory proteins, tetR family KU217_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_00170 PF00873 AcrB/AcrD/AcrF family KU217_00180 PF01556 DnaJ C terminal domain KU217_00180 PF00226 DnaJ domain KU217_00180 PF00684 DnaJ central domain KU217_00190 PF05173 Dihydrodipicolinate reductase, C-terminus KU217_00190 PF01113 Dihydrodipicolinate reductase, N-terminus KU217_00200 PF07690 Major Facilitator Superfamily KU217_00205 PF00248 Aldo/keto reductase family KU217_00210 PF03466 LysR substrate binding domain KU217_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_00225 PF00392 Bacterial regulatory proteins, gntR family KU217_00225 PF00155 Aminotransferase class I and II KU217_00230 PF00107 Zinc-binding dehydrogenase KU217_00230 PF08240 Alcohol dehydrogenase GroES-like domain KU217_00235 PF03352 Methyladenine glycosylase KU217_00250 PF00633 Helix-hairpin-helix motif KU217_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein KU217_00250 PF10576 Iron-sulfur binding domain of endonuclease III KU217_00250 PF14815 NUDIX domain KU217_00260 PF02230 Phospholipase/Carboxylesterase KU217_00265 PF07043 Protein of unknown function (DUF1328) KU217_00270 PF03692 Putative zinc- or iron-chelating domain KU217_00275 PF07995 Glucose / Sorbosone dehydrogenase KU217_00280 PF00004 ATPase family associated with various cellular activities (AAA) KU217_00280 PF16193 AAA C-terminal domain KU217_00280 PF12002 MgsA AAA+ ATPase C terminal KU217_00285 PF01226 Formate/nitrite transporter KU217_00295 PF01259 SAICAR synthetase KU217_00305 PF00701 Dihydrodipicolinate synthetase family KU217_00310 PF00857 Isochorismatase family KU217_00315 PF01758 Sodium Bile acid symporter family KU217_00320 PF01554 MatE KU217_00325 PF04463 Protein of unknown function (DUF523) KU217_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU217_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU217_00345 PF02798 Glutathione S-transferase, N-terminal domain KU217_00345 PF14497 Glutathione S-transferase, C-terminal domain KU217_00355 PF00324 Amino acid permease KU217_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU217_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU217_00375 PF00392 Bacterial regulatory proteins, gntR family KU217_00375 PF07702 UTRA domain KU217_00380 PF05962 HutD KU217_00385 PF17391 Urocanase N-terminal domain KU217_00385 PF17392 Urocanase C-terminal domain KU217_00385 PF01175 Urocanase Rossmann-like domain KU217_00390 PF00221 Aromatic amino acid lyase KU217_00395 PF00324 Amino acid permease KU217_00400 PF01979 Amidohydrolase family KU217_00405 PF00491 Arginase family KU217_00420 PF01177 Asp/Glu/Hydantoin racemase KU217_00425 PF01380 SIS domain KU217_00430 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_00430 PF14602 Hexapeptide repeat of succinyl-transferase KU217_00430 PF12804 MobA-like NTP transferase domain KU217_00435 PF04608 Phosphatidylglycerophosphatase A KU217_00440 PF00586 AIR synthase related protein, N-terminal domain KU217_00440 PF02769 AIR synthase related protein, C-terminal domain KU217_00445 PF01029 NusB family KU217_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase KU217_00455 PF00925 GTP cyclohydrolase II KU217_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU217_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase KU217_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KU217_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU217_00490 PF00581 Rhodanese-like domain KU217_00495 PF02666 Phosphatidylserine decarboxylase KU217_00500 PF03069 Acetamidase/Formamidase family KU217_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_00520 PF00512 His Kinase A (phospho-acceptor) domain KU217_00520 PF00989 PAS fold KU217_00520 PF11808 Phosphate regulon sensor protein PhoR KU217_00525 PF00486 Transcriptional regulatory protein, C terminal KU217_00525 PF00072 Response regulator receiver domain KU217_00535 PF00106 short chain dehydrogenase KU217_00540 PF01554 MatE KU217_00545 PF00155 Aminotransferase class I and II KU217_00550 PF04286 Protein of unknown function (DUF445) KU217_00565 PF04262 Glutamate-cysteine ligase KU217_00570 PF02600 Disulfide bond formation protein DsbB KU217_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU217_00575 PF04717 Type VI secretion system, phage-baseplate injector KU217_00575 PF13296 Putative type VI secretion system Rhs element Vgr KU217_00580 PF01471 Putative peptidoglycan binding domain KU217_00580 PF01476 LysM domain KU217_00580 PF01510 N-acetylmuramoyl-L-alanine amidase KU217_00600 PF05728 Uncharacterised protein family (UPF0227) KU217_00605 PF00204 DNA gyrase B KU217_00605 PF00986 DNA gyrase B subunit, carboxyl terminus KU217_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_00605 PF01751 Toprim domain KU217_00610 PF04115 Ureidoglycolate lyase KU217_00615 PF03561 Allantoicase repeat KU217_00620 PF01494 FAD binding domain KU217_00630 PF00860 Permease family KU217_00635 PF00576 HIUase/Transthyretin family KU217_00665 PF11412 Disulphide bond corrector protein DsbC KU217_00665 PF02683 Cytochrome C biogenesis protein transmembrane region KU217_00670 PF07694 5TMR of 5TMR-LYT KU217_00670 PF00990 Diguanylate cyclase, GGDEF domain KU217_00675 PF07859 alpha/beta hydrolase fold KU217_00685 PF03960 ArsC family KU217_00690 PF03372 Endonuclease/Exonuclease/phosphatase family KU217_00695 PF00156 Phosphoribosyl transferase domain KU217_00700 PF00593 TonB dependent receptor KU217_00700 PF07715 TonB-dependent Receptor Plug Domain KU217_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KU217_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KU217_00715 PF03033 Glycosyltransferase family 28 N-terminal domain KU217_00715 PF04101 Glycosyltransferase family 28 C-terminal domain KU217_00720 PF01225 Mur ligase family, catalytic domain KU217_00720 PF02875 Mur ligase family, glutamate ligase domain KU217_00720 PF08245 Mur ligase middle domain KU217_00725 PF07478 D-ala D-ala ligase C-terminus KU217_00725 PF01820 D-ala D-ala ligase N-terminus KU217_00730 PF08478 POTRA domain, FtsQ-type KU217_00730 PF03799 Cell division protein FtsQ KU217_00735 PF02491 SHS2 domain inserted in FTSA KU217_00740 PF12327 FtsZ family, C-terminal domain KU217_00740 PF00091 Tubulin/FtsZ family, GTPase domain KU217_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KU217_00755 PF01551 Peptidase family M23 KU217_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain KU217_00760 PF00456 Transketolase, thiamine diphosphate binding domain KU217_00765 PF02817 e3 binding domain KU217_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU217_00765 PF00364 Biotin-requiring enzyme KU217_00775 PF01169 Uncharacterized protein family UPF0016 KU217_00780 PF00593 TonB dependent receptor KU217_00780 PF07715 TonB-dependent Receptor Plug Domain KU217_00785 PF01613 Flavin reductase like domain KU217_00785 PF00258 Flavodoxin KU217_00790 PF03692 Putative zinc- or iron-chelating domain KU217_00795 PF00478 IMP dehydrogenase / GMP reductase domain KU217_00795 PF00571 CBS domain KU217_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU217_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU217_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU217_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU217_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KU217_00805 PF01243 Pyridoxamine 5'-phosphate oxidase KU217_00810 PF02272 DHHA1 domain KU217_00810 PF01368 DHH family KU217_00810 PF17768 RecJ OB domain KU217_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KU217_00840 PF04452 RNA methyltransferase KU217_00845 PF00924 Mechanosensitive ion channel KU217_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus KU217_00855 PF00501 AMP-binding enzyme KU217_00855 PF13193 AMP-binding enzyme C-terminal domain KU217_00860 PF00857 Isochorismatase family KU217_00865 PF01037 Lrp/AsnC ligand binding domain KU217_00870 PF00296 Luciferase-like monooxygenase KU217_00875 PF03358 NADPH-dependent FMN reductase KU217_00880 PF00196 Bacterial regulatory proteins, luxR family KU217_00880 PF00072 Response regulator receiver domain KU217_00890 PF00672 HAMP domain KU217_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_00890 PF00512 His Kinase A (phospho-acceptor) domain KU217_00890 PF01627 Hpt domain KU217_00890 PF00072 Response regulator receiver domain KU217_00895 PF04341 Protein of unknown function, DUF485 KU217_00900 PF00474 Sodium:solute symporter family KU217_00910 PF02028 BCCT, betaine/carnitine/choline family transporter KU217_00920 PF00990 Diguanylate cyclase, GGDEF domain KU217_00930 PF00005 ABC transporter KU217_00930 PF17755 UvrA DNA-binding domain KU217_00930 PF17760 UvrA interaction domain KU217_00935 PF16925 Tetracyclin repressor-like, C-terminal domain KU217_00935 PF00440 Bacterial regulatory proteins, tetR family KU217_00940 PF00107 Zinc-binding dehydrogenase KU217_00940 PF08240 Alcohol dehydrogenase GroES-like domain KU217_00950 PF06942 GlpM protein KU217_00955 PF02581 Thiamine monophosphate synthase KU217_00955 PF03070 TENA/THI-4/PQQC family KU217_00955 PF08543 Phosphomethylpyrimidine kinase KU217_00965 PF07690 Major Facilitator Superfamily KU217_00970 PF00436 Single-strand binding protein family KU217_00980 PF03591 AzlC protein KU217_00990 PF00324 Amino acid permease KU217_00995 PF00155 Aminotransferase class I and II KU217_00995 PF00392 Bacterial regulatory proteins, gntR family KU217_01000 PF00202 Aminotransferase class-III KU217_01005 PF00171 Aldehyde dehydrogenase family KU217_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_01015 PF00857 Isochorismatase family KU217_01020 PF02678 Pirin KU217_01020 PF05726 Pirin C-terminal cupin domain KU217_01025 PF01593 Flavin containing amine oxidoreductase KU217_01045 PF07690 Major Facilitator Superfamily KU217_01050 PF03466 LysR substrate binding domain KU217_01050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_01070 PF00248 Aldo/keto reductase family KU217_01075 PF12833 Helix-turn-helix domain KU217_01075 PF02311 AraC-like ligand binding domain KU217_01090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU217_01105 PF01638 HxlR-like helix-turn-helix KU217_01110 PF02525 Flavodoxin-like fold KU217_01130 PF02705 K+ potassium transporter KU217_01160 PF00230 Major intrinsic protein KU217_01175 PF00977 Histidine biosynthesis protein KU217_01180 PF01636 Phosphotransferase enzyme family KU217_01195 PF03992 Antibiotic biosynthesis monooxygenase KU217_01210 PF00977 Histidine biosynthesis protein KU217_01225 PF00117 Glutamine amidotransferase class-I KU217_01230 PF00475 Imidazoleglycerol-phosphate dehydratase KU217_01250 PF00583 Acetyltransferase (GNAT) family KU217_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KU217_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KU217_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_01265 PF00672 HAMP domain KU217_01265 PF00512 His Kinase A (phospho-acceptor) domain KU217_01270 PF00072 Response regulator receiver domain KU217_01270 PF00486 Transcriptional regulatory protein, C terminal KU217_01275 PF09371 Tex-like protein N-terminal domain KU217_01275 PF00575 S1 RNA binding domain KU217_01275 PF17674 HHH domain KU217_01275 PF16921 Tex protein YqgF-like domain KU217_01280 PF00916 Sulfate permease family KU217_01280 PF01740 STAS domain KU217_01285 PF00106 short chain dehydrogenase KU217_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme KU217_01295 PF12848 ABC transporter KU217_01295 PF00005 ABC transporter KU217_01320 PF04191 Phospholipid methyltransferase KU217_01340 PF00529 HlyD membrane-fusion protein of T1SS KU217_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_01345 PF00873 AcrB/AcrD/AcrF family KU217_01350 PF01545 Cation efflux family KU217_01380 PF00324 Amino acid permease KU217_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU217_01410 PF01795 MraW methylase family KU217_01420 PF03717 Penicillin-binding Protein dimerisation domain KU217_01420 PF00905 Penicillin binding protein transpeptidase domain KU217_01425 PF01225 Mur ligase family, catalytic domain KU217_01425 PF08245 Mur ligase middle domain KU217_01425 PF02875 Mur ligase family, glutamate ligase domain KU217_01430 PF01225 Mur ligase family, catalytic domain KU217_01430 PF02875 Mur ligase family, glutamate ligase domain KU217_01430 PF08245 Mur ligase middle domain KU217_01435 PF00953 Glycosyl transferase family 4 KU217_01445 PF13847 Methyltransferase domain KU217_01450 PF00912 Transglycosylase KU217_01450 PF00905 Penicillin binding protein transpeptidase domain KU217_01450 PF17092 Penicillin-binding protein OB-like domain KU217_01455 PF11104 Type IV pilus assembly protein PilM; KU217_01460 PF05137 Fimbrial assembly protein (PilN) KU217_01465 PF04350 Pilus assembly protein, PilO KU217_01475 PF11741 AMIN domain KU217_01475 PF07660 Secretin and TonB N terminus short domain KU217_01475 PF00263 Bacterial type II and III secretion system protein KU217_01475 PF03958 Bacterial type II/III secretion system short domain KU217_01480 PF01202 Shikimate kinase KU217_01485 PF01761 3-dehydroquinate synthase KU217_01495 PF04898 Glutamate synthase central domain KU217_01495 PF00310 Glutamine amidotransferases class-II KU217_01495 PF01493 GXGXG motif KU217_01495 PF01645 Conserved region in glutamate synthase KU217_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KU217_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_01510 PF04011 LemA family KU217_01515 PF04536 TPM domain KU217_01525 PF07963 Prokaryotic N-terminal methylation motif KU217_01525 PF00114 Pilin (bacterial filament) KU217_01530 PF15864 Protein glycosylation ligase KU217_01530 PF04932 O-Antigen ligase KU217_01530 PF11846 Virulence factor membrane-bound polymerase, C-terminal KU217_01535 PF00210 Ferritin-like domain KU217_01540 PF04324 BFD-like [2Fe-2S] binding domain KU217_01545 PF01042 Endoribonuclease L-PSP KU217_01550 PF02824 TGS domain KU217_01550 PF13291 ACT domain KU217_01550 PF04607 Region found in RelA / SpoT proteins KU217_01560 PF01192 RNA polymerase Rpb6 KU217_01565 PF00625 Guanylate kinase KU217_01570 PF02401 LytB protein KU217_01610 PF00886 Ribosomal protein S16 KU217_01615 PF05239 PRC-barrel domain KU217_01615 PF01782 RimM N-terminal domain KU217_01620 PF01746 tRNA (Guanine-1)-methyltransferase KU217_01625 PF01245 Ribosomal protein L19 KU217_01630 PF00561 alpha/beta hydrolase fold KU217_01635 PF03280 Proteobacterial lipase chaperone protein KU217_01640 PF01509 TruB family pseudouridylate synthase (N terminal domain) KU217_01640 PF16198 tRNA pseudouridylate synthase B C-terminal domain KU217_01640 PF09157 Pseudouridine synthase II TruB, C-terminal KU217_01645 PF01925 Sulfite exporter TauE/SafE KU217_01655 PF00892 EamA-like transporter family KU217_01660 PF00892 EamA-like transporter family KU217_01665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU217_01665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU217_01670 PF02913 FAD linked oxidases, C-terminal domain KU217_01670 PF01565 FAD binding domain KU217_01680 PF03992 Antibiotic biosynthesis monooxygenase KU217_01685 PF02525 Flavodoxin-like fold KU217_01695 PF07690 Major Facilitator Superfamily KU217_01700 PF12805 FUSC-like inner membrane protein yccS KU217_01705 PF00080 Copper/zinc superoxide dismutase (SODC) KU217_01710 PF01594 AI-2E family transporter KU217_01715 PF13614 AAA domain KU217_01735 PF08241 Methyltransferase domain KU217_01745 PF00324 Amino acid permease KU217_01750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU217_01750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU217_01755 PF00202 Aminotransferase class-III KU217_01760 PF04958 Arginine N-succinyltransferase beta subunit KU217_01765 PF00171 Aldehyde dehydrogenase family KU217_01770 PF04996 Succinylarginine dihydrolase KU217_01775 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KU217_01790 PF00082 Subtilase family KU217_01790 PF05922 Peptidase inhibitor I9 KU217_01805 PF03466 LysR substrate binding domain KU217_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_01810 PF00892 EamA-like transporter family KU217_01825 PF02092 Glycyl-tRNA synthetase beta subunit KU217_01825 PF05746 DALR anticodon binding domain KU217_01835 PF02091 Glycyl-tRNA synthetase alpha subunit KU217_01840 PF07690 Major Facilitator Superfamily KU217_01855 PF00571 CBS domain KU217_01860 PF04024 PspC domain KU217_01870 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU217_01870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_01870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_01870 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_01880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KU217_01880 PF01488 Shikimate / quinate 5-dehydrogenase KU217_01880 PF08501 Shikimate dehydrogenase substrate binding domain KU217_01885 PF01218 Coproporphyrinogen III oxidase KU217_01890 PF00925 GTP cyclohydrolase II KU217_01895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KU217_01895 PF02779 Transketolase, pyrimidine binding domain KU217_01895 PF02780 Transketolase, C-terminal domain KU217_01900 PF00459 Inositol monophosphatase family KU217_01905 PF00271 Helicase conserved C-terminal domain KU217_01905 PF00270 DEAD/DEAH box helicase KU217_01905 PF03880 DbpA RNA binding domain KU217_01905 PF12343 Cold shock protein DEAD box A KU217_01915 PF00005 ABC transporter KU217_01920 PF02405 Permease MlaE KU217_01930 PF05494 MlaC protein KU217_01940 PF01544 CorA-like Mg2+ transporter protein KU217_01945 PF03641 Possible lysine decarboxylase KU217_01950 PF00293 NUDIX domain KU217_01955 PF00156 Phosphoribosyl transferase domain KU217_01960 PF17191 RecG wedge domain KU217_01960 PF00271 Helicase conserved C-terminal domain KU217_01960 PF00270 DEAD/DEAH box helicase KU217_01975 PF01553 Acyltransferase KU217_01985 PF00375 Sodium:dicarboxylate symporter family KU217_01995 PF01926 50S ribosome-binding GTPase KU217_02000 PF02082 Transcriptional regulator KU217_02005 PF00042 Globin KU217_02005 PF00175 Oxidoreductase NAD-binding domain KU217_02005 PF00970 Oxidoreductase FAD-binding domain KU217_02010 PF05872 Bacterial protein of unknown function (DUF853) KU217_02015 PF01053 Cys/Met metabolism PLP-dependent enzyme KU217_02020 PF00117 Glutamine amidotransferase class-I KU217_02025 PF00338 Ribosomal protein S10p/S20e KU217_02030 PF00297 Ribosomal protein L3 KU217_02035 PF00573 Ribosomal protein L4/L1 family KU217_02040 PF00276 Ribosomal protein L23 KU217_02045 PF00181 Ribosomal Proteins L2, RNA binding domain KU217_02045 PF03947 Ribosomal Proteins L2, C-terminal domain KU217_02050 PF00203 Ribosomal protein S19 KU217_02055 PF00237 Ribosomal protein L22p/L17e KU217_02060 PF00189 Ribosomal protein S3, C-terminal domain KU217_02060 PF07650 KH domain KU217_02065 PF00252 Ribosomal protein L16p/L10e KU217_02070 PF00831 Ribosomal L29 protein KU217_02075 PF00366 Ribosomal protein S17 KU217_02080 PF00238 Ribosomal protein L14p/L23e KU217_02085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KU217_02085 PF00467 KOW motif KU217_02090 PF00281 Ribosomal protein L5 KU217_02090 PF00673 ribosomal L5P family C-terminus KU217_02095 PF00253 Ribosomal protein S14p/S29e KU217_02100 PF00410 Ribosomal protein S8 KU217_02105 PF00347 Ribosomal protein L6 KU217_02110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KU217_02115 PF03719 Ribosomal protein S5, C-terminal domain KU217_02115 PF00333 Ribosomal protein S5, N-terminal domain KU217_02120 PF00327 Ribosomal protein L30p/L7e KU217_02125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KU217_02130 PF00344 SecY translocase KU217_02135 PF00444 Ribosomal protein L36 KU217_02140 PF00416 Ribosomal protein S13/S18 KU217_02145 PF00411 Ribosomal protein S11 KU217_02150 PF01479 S4 domain KU217_02150 PF00163 Ribosomal protein S4/S9 N-terminal domain KU217_02155 PF01000 RNA polymerase Rpb3/RpoA insert domain KU217_02155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KU217_02155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KU217_02160 PF01196 Ribosomal protein L17 KU217_02165 PF00743 Flavin-binding monooxygenase-like KU217_02170 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_02175 PF03937 Flavinator of succinate dehydrogenase KU217_02205 PF09526 Probable metal-binding protein (DUF2387) KU217_02210 PF01432 Peptidase family M3 KU217_02215 PF00575 S1 RNA binding domain KU217_02215 PF00773 RNB domain KU217_02215 PF08206 Ribonuclease B OB domain KU217_02215 PF08461 Ribonuclease R winged-helix domain KU217_02215 PF17876 Cold shock domain KU217_02265 PF01557 Fumarylacetoacetate (FAA) hydrolase family KU217_02270 PF12833 Helix-turn-helix domain KU217_02275 PF00892 EamA-like transporter family KU217_02280 PF03631 Virulence factor BrkB KU217_02285 PF03358 NADPH-dependent FMN reductase KU217_02310 PF02130 Uncharacterized protein family UPF0054 KU217_02315 PF02562 PhoH-like protein KU217_02320 PF04055 Radical SAM superfamily KU217_02320 PF00919 Uncharacterized protein family UPF0004 KU217_02320 PF01938 TRAM domain KU217_02325 PF01551 Peptidase family M23 KU217_02325 PF01464 Transglycosylase SLT domain KU217_02325 PF10145 Phage-related minor tail protein KU217_02335 PF00056 lactate/malate dehydrogenase, NAD binding domain KU217_02335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KU217_02355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KU217_02360 PF01066 CDP-alcohol phosphatidyltransferase KU217_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_02405 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_02410 PF17932 Tetracyclin repressor-like, C-terminal domain KU217_02410 PF00440 Bacterial regulatory proteins, tetR family KU217_02425 PF01039 Carboxyl transferase domain KU217_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_02430 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_02440 PF02785 Biotin carboxylase C-terminal domain KU217_02440 PF00289 Biotin carboxylase, N-terminal domain KU217_02440 PF00364 Biotin-requiring enzyme KU217_02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_02470 PF04386 Stringent starvation protein B KU217_02475 PF00043 Glutathione S-transferase, C-terminal domain KU217_02475 PF13417 Glutathione S-transferase, N-terminal domain KU217_02480 PF00380 Ribosomal protein S9/S16 KU217_02485 PF00572 Ribosomal protein L13 KU217_02490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KU217_02495 PF00398 Ribosomal RNA adenine dimethylase KU217_02500 PF00149 Calcineurin-like phosphoesterase KU217_02520 PF01926 50S ribosome-binding GTPase KU217_02520 PF13167 GTP-binding GTPase N-terminal KU217_02520 PF16360 GTP-binding GTPase Middle Region KU217_02530 PF13091 PLD-like domain KU217_02535 PF10518 TAT (twin-arginine translocation) pathway signal sequence KU217_02535 PF00149 Calcineurin-like phosphoesterase KU217_02540 PF01389 OmpA-like transmembrane domain KU217_02540 PF00691 OmpA family KU217_02580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU217_02580 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_02590 PF00753 Metallo-beta-lactamase superfamily KU217_02590 PF04273 Putative phosphatase (DUF442) KU217_02595 PF00561 alpha/beta hydrolase fold KU217_02600 PF00085 Thioredoxin KU217_02605 PF03061 Thioesterase superfamily KU217_02615 PF04461 Protein of unknown function (DUF520) KU217_02625 PF01266 FAD dependent oxidoreductase KU217_02625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU217_02635 PF03795 YCII-related domain KU217_02640 PF04279 Intracellular septation protein A KU217_02645 PF02811 PHP domain KU217_02650 PF01062 Bestrophin, RFP-TM, chloride channel KU217_02655 PF04002 RadC-like JAB domain KU217_02660 PF04127 DNA / pantothenate metabolism flavoprotein KU217_02660 PF02441 Flavoprotein KU217_02665 PF07549 SecD/SecF GG Motif KU217_02665 PF02355 Protein export membrane protein KU217_02670 PF02355 Protein export membrane protein KU217_02670 PF13721 SecD export protein N-terminal TM region KU217_02670 PF07549 SecD/SecF GG Motif KU217_02675 PF02699 Preprotein translocase subunit KU217_02680 PF01702 Queuine tRNA-ribosyltransferase KU217_02695 PF02547 Queuosine biosynthesis protein KU217_02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_02730 PF00512 His Kinase A (phospho-acceptor) domain KU217_02730 PF07689 KaiB domain KU217_02735 PF03710 Glutamate-ammonia ligase adenylyltransferase KU217_02735 PF08335 GlnD PII-uridylyltransferase KU217_02740 PF01063 Amino-transferase class IV KU217_02755 PF01522 Polysaccharide deacetylase KU217_02765 PF13439 Glycosyltransferase Family 4 KU217_02765 PF00534 Glycosyl transferases group 1 KU217_02790 PF17101 Stealth protein CR1, conserved region 1 KU217_02790 PF11380 Stealth protein CR2, conserved region 2 KU217_02790 PF17102 Stealth protein CR3, conserved region 3 KU217_02795 PF00152 tRNA synthetases class II (D, K and N) KU217_02795 PF02938 GAD domain KU217_02795 PF01336 OB-fold nucleic acid binding domain KU217_02805 PF00593 TonB dependent receptor KU217_02805 PF07715 TonB-dependent Receptor Plug Domain KU217_02825 PF06146 Phosphate-starvation-inducible E KU217_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_02830 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU217_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_02830 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_02835 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_02835 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU217_02835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_02835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_02845 PF00672 HAMP domain KU217_02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_02845 PF00512 His Kinase A (phospho-acceptor) domain KU217_02850 PF00072 Response regulator receiver domain KU217_02850 PF00486 Transcriptional regulatory protein, C terminal KU217_02855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KU217_02875 PF01923 Cobalamin adenosyltransferase KU217_02880 PF07715 TonB-dependent Receptor Plug Domain KU217_02880 PF00593 TonB dependent receptor KU217_02885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KU217_02890 PF00291 Pyridoxal-phosphate dependent enzyme KU217_02915 PF00290 Tryptophan synthase alpha chain KU217_02920 PF01039 Carboxyl transferase domain KU217_02925 PF02875 Mur ligase family, glutamate ligase domain KU217_02925 PF08245 Mur ligase middle domain KU217_02940 PF00753 Metallo-beta-lactamase superfamily KU217_02945 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU217_02945 PF00578 AhpC/TSA family KU217_02950 PF02810 SEC-C motif KU217_02950 PF07517 SecA DEAD-like domain KU217_02950 PF01043 SecA preprotein cross-linking domain KU217_02950 PF07516 SecA Wing and Scaffold domain KU217_02960 PF07690 Major Facilitator Superfamily KU217_02960 PF00083 Sugar (and other) transporter KU217_02965 PF03006 Haemolysin-III related KU217_02975 PF13673 Acetyltransferase (GNAT) domain KU217_02990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU217_02990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU217_02990 PF00378 Enoyl-CoA hydratase/isomerase KU217_02995 PF00108 Thiolase, N-terminal domain KU217_02995 PF02803 Thiolase, C-terminal domain KU217_03000 PF02311 AraC-like ligand binding domain KU217_03000 PF12833 Helix-turn-helix domain KU217_03005 PF02515 CoA-transferase family III KU217_03010 PF04966 Carbohydrate-selective porin, OprB family KU217_03015 PF01011 PQQ enzyme repeat KU217_03020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU217_03020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU217_03030 PF00893 Small Multidrug Resistance protein KU217_03040 PF02803 Thiolase, C-terminal domain KU217_03040 PF00108 Thiolase, N-terminal domain KU217_03050 PF13505 Outer membrane protein beta-barrel domain KU217_03050 PF00691 OmpA family KU217_03060 PF01139 tRNA-splicing ligase RtcB KU217_03065 PF00324 Amino acid permease KU217_03070 PF08468 Methyltransferase small domain N-terminal KU217_03070 PF05175 Methyltransferase small domain KU217_03075 PF00860 Permease family KU217_03080 PF00679 Elongation factor G C-terminus KU217_03080 PF03144 Elongation factor Tu domain 2 KU217_03080 PF00009 Elongation factor Tu GTP binding domain KU217_03085 PF01741 Large-conductance mechanosensitive channel, MscL KU217_03100 PF06827 Zinc finger found in FPG and IleRS KU217_03100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KU217_03100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KU217_03105 PF02245 Methylpurine-DNA glycosylase (MPG) KU217_03110 PF07715 TonB-dependent Receptor Plug Domain KU217_03110 PF00593 TonB dependent receptor KU217_03115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_03130 PF13098 Thioredoxin-like domain KU217_03130 PF10411 Disulfide bond isomerase protein N-terminus KU217_03135 PF01571 Aminomethyltransferase folate-binding domain KU217_03145 PF04343 Protein of unknown function, DUF488 KU217_03150 PF08274 PhnA Zinc-Ribbon KU217_03150 PF03831 PhnA domain KU217_03155 PF07411 Domain of unknown function (DUF1508) KU217_03160 PF04073 Aminoacyl-tRNA editing domain KU217_03160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU217_03160 PF03129 Anticodon binding domain KU217_03165 PF00873 AcrB/AcrD/AcrF family KU217_03180 PF00072 Response regulator receiver domain KU217_03185 PF00072 Response regulator receiver domain KU217_03190 PF01584 CheW-like domain KU217_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU217_03195 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KU217_03200 PF01584 CheW-like domain KU217_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_03200 PF01627 Hpt domain KU217_03200 PF00072 Response regulator receiver domain KU217_03210 PF01546 Peptidase family M20/M25/M40 KU217_03210 PF07687 Peptidase dimerisation domain KU217_03215 PF08085 Entericidin EcnA/B family KU217_03225 PF04304 Protein of unknown function (DUF454) KU217_03230 PF17969 L,D-transpeptidase C-terminal domain KU217_03230 PF03734 L,D-transpeptidase catalytic domain KU217_03270 PF00667 FAD binding domain KU217_03270 PF00258 Flavodoxin KU217_03270 PF00175 Oxidoreductase NAD-binding domain KU217_03280 PF12805 FUSC-like inner membrane protein yccS KU217_03285 PF07690 Major Facilitator Superfamily KU217_03290 PF00881 Nitroreductase family KU217_03305 PF01235 Sodium:alanine symporter family KU217_03310 PF01734 Patatin-like phospholipase KU217_03315 PF13291 ACT domain KU217_03315 PF00291 Pyridoxal-phosphate dependent enzyme KU217_03320 PF05992 SbmA/BacA-like family KU217_03325 PF01431 Peptidase family M13 KU217_03325 PF05649 Peptidase family M13 KU217_03350 PF02637 GatB domain KU217_03350 PF02934 GatB/GatE catalytic domain KU217_03355 PF01425 Amidase KU217_03360 PF02686 Glu-tRNAGln amidotransferase C subunit KU217_03370 PF04085 rod shape-determining protein MreC KU217_03375 PF04093 rod shape-determining protein MreD KU217_03380 PF02545 Maf-like protein KU217_03385 PF00575 S1 RNA binding domain KU217_03385 PF10150 Ribonuclease E/G family KU217_03395 PF06974 Protein of unknown function (DUF1298) KU217_03395 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KU217_03400 PF01507 Phosphoadenosine phosphosulfate reductase family KU217_03415 PF02525 Flavodoxin-like fold KU217_03435 PF02673 Bacitracin resistance protein BacA KU217_03440 PF06719 AraC-type transcriptional regulator N-terminus KU217_03440 PF12833 Helix-turn-helix domain KU217_03445 PF00698 Acyl transferase domain KU217_03445 PF08240 Alcohol dehydrogenase GroES-like domain KU217_03445 PF08990 Erythronolide synthase docking KU217_03445 PF09277 Erythronolide synthase, docking KU217_03445 PF16197 Ketoacyl-synthetase C-terminal extension KU217_03445 PF00109 Beta-ketoacyl synthase, N-terminal domain KU217_03445 PF02801 Beta-ketoacyl synthase, C-terminal domain KU217_03445 PF08659 KR domain KU217_03445 PF00550 Phosphopantetheine attachment site KU217_03445 PF14765 Polyketide synthase dehydratase KU217_03450 PF01965 DJ-1/PfpI family KU217_03460 PF00324 Amino acid permease KU217_03465 PF04303 PrpF protein KU217_03470 PF00348 Polyprenyl synthetase KU217_03475 PF04237 YjbR KU217_03480 PF01145 SPFH domain / Band 7 family KU217_03490 PF01734 Patatin-like phospholipase KU217_03510 PF08019 Phosphoethanolamine transferase EptA/EptB KU217_03510 PF00884 Sulfatase KU217_03515 PF00072 Response regulator receiver domain KU217_03515 PF00486 Transcriptional regulatory protein, C terminal KU217_03520 PF08521 Two-component sensor kinase N-terminal KU217_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_03520 PF00512 His Kinase A (phospho-acceptor) domain KU217_03530 PF00909 Ammonium Transporter Family KU217_03535 PF03466 LysR substrate binding domain KU217_03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_03560 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KU217_03565 PF08264 Anticodon-binding domain of tRNA KU217_03565 PF00133 tRNA synthetases class I (I, L, M and V) KU217_03565 PF10458 Valyl tRNA synthetase tRNA binding arm KU217_03575 PF00133 tRNA synthetases class I (I, L, M and V) KU217_03575 PF10458 Valyl tRNA synthetase tRNA binding arm KU217_03575 PF08264 Anticodon-binding domain of tRNA KU217_03595 PF01906 Putative heavy-metal-binding KU217_03600 PF01906 Putative heavy-metal-binding KU217_03605 PF02321 Outer membrane efflux protein KU217_03610 PF00873 AcrB/AcrD/AcrF family KU217_03615 PF00529 HlyD membrane-fusion protein of T1SS KU217_03615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_03620 PF01569 PAP2 superfamily KU217_03630 PF00348 Polyprenyl synthetase KU217_03640 PF00829 Ribosomal prokaryotic L21 protein KU217_03645 PF01016 Ribosomal L27 protein KU217_03650 PF03548 Outer membrane lipoprotein carrier protein LolA KU217_03660 PF02403 Seryl-tRNA synthetase N-terminal domain KU217_03660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU217_03665 PF10414 Sirohaem synthase dimerisation region KU217_03665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU217_03665 PF14824 Sirohaem biosynthesis protein central KU217_03670 PF00588 SpoU rRNA Methylase family KU217_03675 PF01638 HxlR-like helix-turn-helix KU217_03680 PF03358 NADPH-dependent FMN reductase KU217_03685 PF13520 Amino acid permease KU217_03690 PF00465 Iron-containing alcohol dehydrogenase KU217_03700 PF03099 Biotin/lipoate A/B protein ligase family KU217_03705 PF04359 Protein of unknown function (DUF493) KU217_03710 PF04539 Sigma-70 region 3 KU217_03710 PF04542 Sigma-70 region 2 KU217_03710 PF04545 Sigma-70, region 4 KU217_03710 PF03979 Sigma-70 factor, region 1.1 KU217_03710 PF04546 Sigma-70, non-essential region KU217_03710 PF00140 Sigma-70 factor, region 1.2 KU217_03725 PF17773 UPF0176 acylphosphatase like domain KU217_03725 PF00581 Rhodanese-like domain KU217_03735 PF00285 Citrate synthase, C-terminal domain KU217_03740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU217_03745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU217_03750 PF00890 FAD binding domain KU217_03750 PF02910 Fumarate reductase flavoprotein C-term KU217_03755 PF13085 2Fe-2S iron-sulfur cluster binding domain KU217_03770 PF02779 Transketolase, pyrimidine binding domain KU217_03770 PF00676 Dehydrogenase E1 component KU217_03770 PF16870 2-oxoglutarate dehydrogenase C-terminal KU217_03770 PF16078 2-oxoglutarate dehydrogenase N-terminus KU217_03775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU217_03775 PF02817 e3 binding domain KU217_03775 PF00364 Biotin-requiring enzyme KU217_03780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU217_03780 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_03785 PF00549 CoA-ligase KU217_03785 PF08442 ATP-grasp domain KU217_03790 PF02629 CoA binding domain KU217_03790 PF00549 CoA-ligase KU217_03795 PF00579 tRNA synthetases class I (W and Y) KU217_03800 PF05661 Protein of unknown function (DUF808) KU217_03805 PF04228 Putative neutral zinc metallopeptidase KU217_03810 PF00999 Sodium/hydrogen exchanger family KU217_03855 PF09587 Bacterial capsule synthesis protein PGA_cap KU217_03865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU217_03870 PF00582 Universal stress protein family KU217_03875 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_03880 PF01042 Endoribonuclease L-PSP KU217_03885 PF00440 Bacterial regulatory proteins, tetR family KU217_03890 PF03449 Transcription elongation factor, N-terminal KU217_03890 PF01272 Transcription elongation factor, GreA/GreB, C-term KU217_03895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KU217_03895 PF02142 MGS-like domain KU217_03895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_03900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KU217_03900 PF00117 Glutamine amidotransferase class-I KU217_03915 PF01985 CRS1 / YhbY (CRM) domain KU217_03920 PF01728 FtsJ-like methyltransferase KU217_03925 PF17862 AAA+ lid domain KU217_03925 PF01434 Peptidase family M41 KU217_03925 PF00004 ATPase family associated with various cellular activities (AAA) KU217_03925 PF06480 FtsH Extracellular KU217_03930 PF00809 Pterin binding enzyme KU217_03965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KU217_03965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KU217_03980 PF00083 Sugar (and other) transporter KU217_03985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KU217_03985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KU217_03990 PF01266 FAD dependent oxidoreductase KU217_03990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KU217_03995 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KU217_03995 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KU217_04000 PF00781 Diacylglycerol kinase catalytic domain KU217_04005 PF00149 Calcineurin-like phosphoesterase KU217_04015 PF00166 Chaperonin 10 Kd subunit KU217_04020 PF00118 TCP-1/cpn60 chaperonin family KU217_04070 PF01726 LexA DNA binding domain KU217_04070 PF00717 Peptidase S24-like KU217_04075 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT KU217_04160 PF06381 Protein of unknown function (DUF1073) KU217_04175 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) KU217_04305 PF13438 Domain of unknown function (DUF4113) KU217_04305 PF11799 impB/mucB/samB family C-terminal domain KU217_04305 PF00817 impB/mucB/samB family KU217_04310 PF00717 Peptidase S24-like KU217_04315 PF00589 Phage integrase family KU217_04315 PF13356 Arm DNA-binding domain KU217_04320 PF01219 Prokaryotic diacylglycerol kinase KU217_04325 PF00753 Metallo-beta-lactamase superfamily KU217_04330 PF03009 Glycerophosphoryl diester phosphodiesterase family KU217_04335 PF00873 AcrB/AcrD/AcrF family KU217_04345 PF01435 Peptidase family M48 KU217_04350 PF01464 Transglycosylase SLT domain KU217_04355 PF01171 PP-loop family KU217_04365 PF01464 Transglycosylase SLT domain KU217_04365 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU217_04370 PF03449 Transcription elongation factor, N-terminal KU217_04370 PF01272 Transcription elongation factor, GreA/GreB, C-term KU217_04385 PF00501 AMP-binding enzyme KU217_04385 PF00668 Condensation domain KU217_04385 PF00550 Phosphopantetheine attachment site KU217_04385 PF00975 Thioesterase domain KU217_04385 PF13193 AMP-binding enzyme C-terminal domain KU217_04395 PF00271 Helicase conserved C-terminal domain KU217_04425 PF00881 Nitroreductase family KU217_04440 PF02595 Glycerate kinase family KU217_04445 PF00384 Molybdopterin oxidoreductase KU217_04450 PF02634 FdhD/NarQ family KU217_04455 PF06803 Protein of unknown function (DUF1232) KU217_04460 PF11890 Domain of unknown function (DUF3410) KU217_04460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU217_04460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU217_04465 PF00152 tRNA synthetases class II (D, K and N) KU217_04475 PF18073 Rubredoxin metal binding domain KU217_04480 PF00324 Amino acid permease KU217_04490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU217_04490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KU217_04495 PF01678 Diaminopimelate epimerase KU217_04500 PF03747 ADP-ribosylglycohydrolase KU217_04505 PF00561 alpha/beta hydrolase fold KU217_04510 PF01810 LysE type translocator KU217_04515 PF02899 Phage integrase, N-terminal SAM-like domain KU217_04515 PF00589 Phage integrase family KU217_04520 PF01012 Electron transfer flavoprotein domain KU217_04525 PF00766 Electron transfer flavoprotein FAD-binding domain KU217_04525 PF01012 Electron transfer flavoprotein domain KU217_04530 PF03989 DNA gyrase C-terminal domain, beta-propeller KU217_04530 PF00521 DNA gyrase/topoisomerase IV, subunit A KU217_04545 PF00535 Glycosyl transferase family 2 KU217_04565 PF13533 Biotin-lipoyl like KU217_04575 PF00266 Aminotransferase class-V KU217_04590 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KU217_04600 PF02687 FtsX-like permease family KU217_04600 PF12704 MacB-like periplasmic core domain KU217_04605 PF00005 ABC transporter KU217_04610 PF13567 Domain of unknown function (DUF4131) KU217_04610 PF03772 Competence protein KU217_04610 PF00753 Metallo-beta-lactamase superfamily KU217_04620 PF06965 Na+/H+ antiporter 1 KU217_04620 PF01343 Peptidase family S49 KU217_04625 PF12697 Alpha/beta hydrolase family KU217_04630 PF00551 Formyl transferase KU217_04635 PF00586 AIR synthase related protein, N-terminal domain KU217_04635 PF02769 AIR synthase related protein, C-terminal domain KU217_04640 PF01594 AI-2E family transporter KU217_04645 PF00308 Bacterial dnaA protein KU217_04645 PF08299 Bacterial dnaA protein helix-turn-helix KU217_04645 PF11638 DnaA N-terminal domain KU217_04685 PF00588 SpoU rRNA Methylase family KU217_04685 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU217_04690 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KU217_04700 PF00691 OmpA family KU217_04705 PF04052 TolB amino-terminal domain KU217_04705 PF07676 WD40-like Beta Propeller Repeat KU217_04715 PF02472 Biopolymer transport protein ExbD/TolR KU217_04720 PF01618 MotA/TolQ/ExbB proton channel family KU217_04725 PF03061 Thioesterase superfamily KU217_04730 PF07687 Peptidase dimerisation domain KU217_04730 PF01546 Peptidase family M20/M25/M40 KU217_04735 PF05491 RuvB C-terminal winged helix domain KU217_04735 PF05496 Holliday junction DNA helicase RuvB P-loop domain KU217_04735 PF17864 RuvB AAA lid domain KU217_04740 PF07499 RuvA, C-terminal domain KU217_04740 PF01330 RuvA N terminal domain KU217_04745 PF01966 HD domain KU217_04750 PF02769 AIR synthase related protein, C-terminal domain KU217_04750 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KU217_04750 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KU217_04755 PF07690 Major Facilitator Superfamily KU217_04760 PF01784 NIF3 (NGG1p interacting factor 3) KU217_04765 PF00378 Enoyl-CoA hydratase/isomerase KU217_04770 PF01467 Cytidylyltransferase-like KU217_04770 PF00293 NUDIX domain KU217_04780 PF00578 AhpC/TSA family KU217_04795 PF06508 Queuosine biosynthesis protein QueC KU217_04805 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_04805 PF14602 Hexapeptide repeat of succinyl-transferase KU217_04805 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KU217_04815 PF03466 LysR substrate binding domain KU217_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_04820 PF12857 TOBE-like domain KU217_04820 PF00005 ABC transporter KU217_04825 PF00528 Binding-protein-dependent transport system inner membrane component KU217_04830 PF00528 Binding-protein-dependent transport system inner membrane component KU217_04845 PF01063 Amino-transferase class IV KU217_04850 PF02618 YceG-like family KU217_04855 PF02223 Thymidylate kinase KU217_04865 PF02910 Fumarate reductase flavoprotein C-term KU217_04865 PF00890 FAD binding domain KU217_04870 PF13180 PDZ domain KU217_04880 PF06421 GTP-binding protein LepA C-terminus KU217_04880 PF03144 Elongation factor Tu domain 2 KU217_04880 PF00679 Elongation factor G C-terminus KU217_04880 PF00009 Elongation factor Tu GTP binding domain KU217_04885 PF10502 Signal peptidase, peptidase S26 KU217_04895 PF14622 Ribonuclease-III-like KU217_04895 PF00035 Double-stranded RNA binding motif KU217_04900 PF07650 KH domain KU217_04900 PF01926 50S ribosome-binding GTPase KU217_04910 PF02565 Recombination protein O C terminal KU217_04910 PF11967 Recombination protein O N terminal KU217_04915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KU217_04920 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KU217_04925 PF00106 short chain dehydrogenase KU217_04955 PF00012 Hsp70 protein KU217_04965 PF00155 Aminotransferase class I and II KU217_04975 PF00990 Diguanylate cyclase, GGDEF domain KU217_04975 PF17151 Periplasmic sensor domain KU217_04985 PF17757 UvrB interaction domain KU217_04985 PF04851 Type III restriction enzyme, res subunit KU217_04985 PF02151 UvrB/uvrC motif KU217_04985 PF00271 Helicase conserved C-terminal domain KU217_04985 PF12344 Ultra-violet resistance protein B KU217_04995 PF00892 EamA-like transporter family KU217_05000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU217_05000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU217_05015 PF01018 GTP1/OBG KU217_05015 PF01926 50S ribosome-binding GTPase KU217_05020 PF01472 PUA domain KU217_05020 PF00696 Amino acid kinase family KU217_05030 PF07759 Protein of unknown function (DUF1615) KU217_05035 PF01207 Dihydrouridine synthase (Dus) KU217_05040 PF03060 Nitronate monooxygenase KU217_05055 PF02350 UDP-N-acetylglucosamine 2-epimerase KU217_05085 PF03441 FAD binding domain of DNA photolyase KU217_05085 PF00875 DNA photolyase KU217_05090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_05100 PF00768 D-alanyl-D-alanine carboxypeptidase KU217_05100 PF07943 Penicillin-binding protein 5, C-terminal domain KU217_05110 PF03971 Monomeric isocitrate dehydrogenase KU217_05115 PF00849 RNA pseudouridylate synthase KU217_05120 PF00180 Isocitrate/isopropylmalate dehydrogenase KU217_05140 PF06779 Uncharacterised MFS-type transporter YbfB KU217_05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_05145 PF03466 LysR substrate binding domain KU217_05150 PF00375 Sodium:dicarboxylate symporter family KU217_05155 PF02567 Phenazine biosynthesis-like protein KU217_05160 PF00675 Insulinase (Peptidase family M16) KU217_05160 PF05193 Peptidase M16 inactive domain KU217_05185 PF02581 Thiamine monophosphate synthase KU217_05190 PF00202 Aminotransferase class-III KU217_05200 PF00849 RNA pseudouridylate synthase KU217_05205 PF00271 Helicase conserved C-terminal domain KU217_05205 PF12137 RNA polymerase recycling family C-terminal KU217_05205 PF00176 SNF2 family N-terminal domain KU217_05205 PF18339 RapA N-terminal Tudor like domain 1 KU217_05205 PF18337 RapA N-terminal Tudor like domain KU217_05215 PF00440 Bacterial regulatory proteins, tetR family KU217_05220 PF00175 Oxidoreductase NAD-binding domain KU217_05220 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_05220 PF00970 Oxidoreductase FAD-binding domain KU217_05225 PF00487 Fatty acid desaturase KU217_05235 PF00440 Bacterial regulatory proteins, tetR family KU217_05235 PF17754 MftR C-terminal domain KU217_05245 PF00202 Aminotransferase class-III KU217_05250 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU217_05255 PF00171 Aldehyde dehydrogenase family KU217_05260 PF01037 Lrp/AsnC ligand binding domain KU217_05265 PF00205 Thiamine pyrophosphate enzyme, central domain KU217_05265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU217_05265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU217_05270 PF00324 Amino acid permease KU217_05275 PF12849 PBP superfamily domain KU217_05280 PF00528 Binding-protein-dependent transport system inner membrane component KU217_05285 PF00528 Binding-protein-dependent transport system inner membrane component KU217_05290 PF00005 ABC transporter KU217_05295 PF01343 Peptidase family S49 KU217_05295 PF08496 Peptidase family S49 N-terminal KU217_05310 PF00206 Lyase KU217_05310 PF08328 Adenylosuccinate lyase C-terminal KU217_05315 PF04356 Protein of unknown function (DUF489) KU217_05325 PF00293 NUDIX domain KU217_05325 PF13344 Haloacid dehalogenase-like hydrolase KU217_05330 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_05340 PF00768 D-alanyl-D-alanine carboxypeptidase KU217_05340 PF07943 Penicillin-binding protein 5, C-terminal domain KU217_05355 PF01975 Survival protein SurE KU217_05360 PF01476 LysM domain KU217_05360 PF01551 Peptidase family M23 KU217_05365 PF03466 LysR substrate binding domain KU217_05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_05370 PF05362 Lon protease (S16) C-terminal proteolytic domain KU217_05370 PF13654 AAA domain KU217_05375 PF07690 Major Facilitator Superfamily KU217_05380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU217_05385 PF13593 SBF-like CPA transporter family (DUF4137) KU217_05390 PF01197 Ribosomal protein L31 KU217_05395 PF12792 CSS motif domain associated with EAL KU217_05395 PF00563 EAL domain KU217_05405 PF04055 Radical SAM superfamily KU217_05410 PF09285 Elongation factor P, C-terminal KU217_05410 PF01132 Elongation factor P (EF-P) OB domain KU217_05410 PF08207 Elongation factor P (EF-P) KOW-like domain KU217_05415 PF02554 Carbon starvation protein CstA KU217_05415 PF13722 5TM C-terminal transporter carbon starvation CstA KU217_05420 PF04328 Selenoprotein, putative KU217_05460 PF00857 Isochorismatase family KU217_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_05465 PF03466 LysR substrate binding domain KU217_05475 PF00743 Flavin-binding monooxygenase-like KU217_05480 PF00561 alpha/beta hydrolase fold KU217_05490 PF01370 NAD dependent epimerase/dehydratase family KU217_05495 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU217_05495 PF12833 Helix-turn-helix domain KU217_05525 PF02678 Pirin KU217_05525 PF17954 Quercetinase C-terminal cupin domain KU217_05530 PF00291 Pyridoxal-phosphate dependent enzyme KU217_05535 PF13309 HTH domain KU217_05535 PF08348 YheO-like PAS domain KU217_05545 PF00501 AMP-binding enzyme KU217_05545 PF13193 AMP-binding enzyme C-terminal domain KU217_05545 PF00668 Condensation domain KU217_05545 PF00550 Phosphopantetheine attachment site KU217_05550 PF00668 Condensation domain KU217_05550 PF13193 AMP-binding enzyme C-terminal domain KU217_05550 PF00975 Thioesterase domain KU217_05550 PF00550 Phosphopantetheine attachment site KU217_05550 PF00501 AMP-binding enzyme KU217_05555 PF01032 FecCD transport family KU217_05560 PF01032 FecCD transport family KU217_05565 PF00005 ABC transporter KU217_05570 PF01497 Periplasmic binding protein KU217_05575 PF07715 TonB-dependent Receptor Plug Domain KU217_05575 PF00593 TonB dependent receptor KU217_05580 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU217_05585 PF00501 AMP-binding enzyme KU217_05585 PF00668 Condensation domain KU217_05585 PF00550 Phosphopantetheine attachment site KU217_05590 PF13193 AMP-binding enzyme C-terminal domain KU217_05590 PF00501 AMP-binding enzyme KU217_05595 PF00550 Phosphopantetheine attachment site KU217_05595 PF00857 Isochorismatase family KU217_05600 PF00282 Pyridoxal-dependent decarboxylase conserved domain KU217_05605 PF00005 ABC transporter KU217_05610 PF00005 ABC transporter KU217_05615 PF00975 Thioesterase domain KU217_05625 PF00425 chorismate binding enzyme KU217_05635 PF01208 Uroporphyrinogen decarboxylase (URO-D) KU217_05640 PF05675 Protein of unknown function (DUF817) KU217_05655 PF00144 Beta-lactamase KU217_05660 PF01227 GTP cyclohydrolase I KU217_05665 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_05665 PF01799 [2Fe-2S] binding domain KU217_05670 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KU217_05670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KU217_05685 PF00218 Indole-3-glycerol phosphate synthase KU217_05690 PF02885 Glycosyl transferase family, helical bundle domain KU217_05690 PF00591 Glycosyl transferase family, a/b domain KU217_05695 PF07715 TonB-dependent Receptor Plug Domain KU217_05695 PF00593 TonB dependent receptor KU217_05700 PF11838 ERAP1-like C-terminal domain KU217_05700 PF01433 Peptidase family M1 domain KU217_05705 PF00117 Glutamine amidotransferase class-I KU217_05715 PF00854 POT family KU217_05720 PF03951 Glutamine synthetase, beta-Grasp domain KU217_05720 PF00120 Glutamine synthetase, catalytic domain KU217_05725 PF04345 Chorismate lyase KU217_05730 PF01040 UbiA prenyltransferase family KU217_05765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KU217_05765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KU217_05770 PF01784 NIF3 (NGG1p interacting factor 3) KU217_05775 PF13180 PDZ domain KU217_05780 PF01743 Poly A polymerase head domain KU217_05780 PF12627 Probable RNA and SrmB- binding site of polymerase A KU217_05785 PF00390 Malic enzyme, N-terminal domain KU217_05785 PF03949 Malic enzyme, NAD binding domain KU217_05785 PF01515 Phosphate acetyl/butaryl transferase KU217_05790 PF00563 EAL domain KU217_05790 PF00990 Diguanylate cyclase, GGDEF domain KU217_05790 PF03707 Bacterial signalling protein N terminal repeat KU217_05795 PF04452 RNA methyltransferase KU217_05800 PF02219 Methylenetetrahydrofolate reductase KU217_05805 PF05221 S-adenosyl-L-homocysteine hydrolase KU217_05805 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KU217_05820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_05820 PF09317 Domain of unknown function (DUF1974) KU217_05820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_05825 PF04055 Radical SAM superfamily KU217_05830 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_05830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU217_05840 PF07690 Major Facilitator Superfamily KU217_05850 PF00557 Metallopeptidase family M24 KU217_05855 PF00318 Ribosomal protein S2 KU217_05860 PF00889 Elongation factor TS KU217_05870 PF12833 Helix-turn-helix domain KU217_05890 PF03330 Lytic transglycolase KU217_05890 PF05036 Sporulation related domain KU217_05895 PF13406 Transglycosylase SLT domain KU217_05900 PF01098 Cell cycle protein KU217_05910 PF14489 QueF-like protein KU217_05910 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KU217_05915 PF01061 ABC-2 type transporter KU217_05920 PF00005 ABC transporter KU217_05945 PF00464 Serine hydroxymethyltransferase KU217_05950 PF02321 Outer membrane efflux protein KU217_05955 PF00873 AcrB/AcrD/AcrF family KU217_05960 PF13533 Biotin-lipoyl like KU217_05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_05965 PF03466 LysR substrate binding domain KU217_05970 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU217_05975 PF00528 Binding-protein-dependent transport system inner membrane component KU217_05980 PF00528 Binding-protein-dependent transport system inner membrane component KU217_05985 PF00005 ABC transporter KU217_05990 PF00893 Small Multidrug Resistance protein KU217_05995 PF00037 4Fe-4S binding domain KU217_06000 PF01136 Peptidase family U32 KU217_06000 PF16325 Peptidase family U32 C-terminal domain KU217_06005 PF00155 Aminotransferase class I and II KU217_06005 PF00392 Bacterial regulatory proteins, gntR family KU217_06010 PF02567 Phenazine biosynthesis-like protein KU217_06015 PF00970 Oxidoreductase FAD-binding domain KU217_06015 PF00175 Oxidoreductase NAD-binding domain KU217_06020 PF01980 tRNA-methyltransferase O KU217_06020 PF18389 TrmO C-terminal domain KU217_06030 PF00437 Type II/IV secretion system protein KU217_06030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU217_06040 PF00486 Transcriptional regulatory protein, C terminal KU217_06040 PF00072 Response regulator receiver domain KU217_06045 PF08521 Two-component sensor kinase N-terminal KU217_06045 PF00512 His Kinase A (phospho-acceptor) domain KU217_06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_06055 PF00293 NUDIX domain KU217_06065 PF00912 Transglycosylase KU217_06065 PF00905 Penicillin binding protein transpeptidase domain KU217_06065 PF14814 Bifunctional transglycosylase second domain KU217_06070 PF01513 ATP-NAD kinase KU217_06075 PF07023 Protein of unknown function (DUF1315) KU217_06080 PF02885 Glycosyl transferase family, helical bundle domain KU217_06080 PF00591 Glycosyl transferase family, a/b domain KU217_06085 PF00375 Sodium:dicarboxylate symporter family KU217_06090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_06090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_06090 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_06095 PF00756 Putative esterase KU217_06100 PF00800 Prephenate dehydratase KU217_06100 PF01842 ACT domain KU217_06100 PF01817 Chorismate mutase type II KU217_06105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU217_06115 PF07687 Peptidase dimerisation domain KU217_06115 PF01546 Peptidase family M20/M25/M40 KU217_06120 PF00753 Metallo-beta-lactamase superfamily KU217_06130 PF03883 Peroxide stress protein YaaA KU217_06140 PF05690 Thiazole biosynthesis protein ThiG KU217_06150 PF04241 Protein of unknown function (DUF423) KU217_06155 PF00140 Sigma-70 factor, region 1.2 KU217_06155 PF04542 Sigma-70 region 2 KU217_06155 PF04545 Sigma-70, region 4 KU217_06165 PF00313 'Cold-shock' DNA-binding domain KU217_06170 PF00271 Helicase conserved C-terminal domain KU217_06170 PF00270 DEAD/DEAH box helicase KU217_06180 PF00881 Nitroreductase family KU217_06185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KU217_06185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KU217_06205 PF01180 Dihydroorotate dehydrogenase KU217_06210 PF02674 Colicin V production protein KU217_06215 PF00156 Phosphoribosyl transferase domain KU217_06230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU217_06230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU217_06235 PF01435 Peptidase family M48 KU217_06240 PF09424 Yqey-like protein KU217_06245 PF01165 Ribosomal protein S21 KU217_06250 PF00814 Glycoprotease family KU217_06270 PF00069 Protein kinase domain KU217_06295 PF17287 POTRA domain KU217_06295 PF08479 POTRA domain, ShlB-type KU217_06295 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KU217_06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_06365 PF03466 LysR substrate binding domain KU217_06370 PF00202 Aminotransferase class-III KU217_06375 PF00171 Aldehyde dehydrogenase family KU217_06380 PF00324 Amino acid permease KU217_06410 PF04076 Bacterial OB fold (BOF) protein KU217_06435 PF00561 alpha/beta hydrolase fold KU217_06440 PF03616 Sodium/glutamate symporter KU217_06450 PF07729 FCD domain KU217_06450 PF00392 Bacterial regulatory proteins, gntR family KU217_06500 PF00083 Sugar (and other) transporter KU217_06500 PF08946 Osmosensory transporter coiled coil KU217_06520 PF00155 Aminotransferase class I and II KU217_06525 PF06826 Predicted Permease Membrane Region KU217_06525 PF02080 TrkA-C domain KU217_06540 PF04403 Paraquat-inducible protein A KU217_06545 PF02470 MlaD protein KU217_06555 PF00576 HIUase/Transthyretin family KU217_06565 PF00072 Response regulator receiver domain KU217_06565 PF00486 Transcriptional regulatory protein, C terminal KU217_06570 PF00512 His Kinase A (phospho-acceptor) domain KU217_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_06570 PF00672 HAMP domain KU217_06610 PF08521 Two-component sensor kinase N-terminal KU217_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_06610 PF00512 His Kinase A (phospho-acceptor) domain KU217_06615 PF00072 Response regulator receiver domain KU217_06615 PF00486 Transcriptional regulatory protein, C terminal KU217_06635 PF01177 Asp/Glu/Hydantoin racemase KU217_06640 PF00892 EamA-like transporter family KU217_06645 PF07995 Glucose / Sorbosone dehydrogenase KU217_06665 PF00375 Sodium:dicarboxylate symporter family KU217_06675 PF16123 Hydroxyacylglutathione hydrolase C-terminus KU217_06675 PF00753 Metallo-beta-lactamase superfamily KU217_06680 PF00528 Binding-protein-dependent transport system inner membrane component KU217_06685 PF09383 NIL domain KU217_06685 PF00005 ABC transporter KU217_06690 PF03180 NLPA lipoprotein KU217_06695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KU217_06695 PF02843 Phosphoribosylglycinamide synthetase, C domain KU217_06695 PF02844 Phosphoribosylglycinamide synthetase, N domain KU217_06700 PF01808 AICARFT/IMPCHase bienzyme KU217_06700 PF02142 MGS-like domain KU217_06705 PF02954 Bacterial regulatory protein, Fis family KU217_06725 PF01134 Glucose inhibited division protein A KU217_06725 PF13932 GidA associated domain KU217_06735 PF14403 Circularly permuted ATP-grasp type 2 KU217_06745 PF01841 Transglutaminase-like superfamily KU217_06745 PF08379 Bacterial transglutaminase-like N-terminal region KU217_06755 PF00842 Alanine racemase, C-terminal domain KU217_06755 PF01168 Alanine racemase, N-terminal domain KU217_06760 PF03796 DnaB-like helicase C terminal domain KU217_06760 PF00772 DnaB-like helicase N terminal domain KU217_06765 PF01281 Ribosomal protein L9, N-terminal domain KU217_06765 PF03948 Ribosomal protein L9, C-terminal domain KU217_06770 PF01084 Ribosomal protein S18 KU217_06775 PF01250 Ribosomal protein S6 KU217_06780 PF01040 UbiA prenyltransferase family KU217_06785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KU217_06790 PF00510 Cytochrome c oxidase subunit III KU217_06795 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU217_06800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KU217_06800 PF06481 COX Aromatic Rich Motif KU217_06810 PF02896 PEP-utilising enzyme, TIM barrel domain KU217_06810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KU217_06810 PF00391 PEP-utilising enzyme, mobile domain KU217_06815 PF03618 Kinase/pyrophosphorylase KU217_06825 PF01522 Polysaccharide deacetylase KU217_06825 PF14883 Hypothetical glycosyl hydrolase family 13 KU217_06830 PF00535 Glycosyl transferase family 2 KU217_06835 PF13994 PgaD-like protein KU217_06845 PF00296 Luciferase-like monooxygenase KU217_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_06860 PF03466 LysR substrate binding domain KU217_06870 PF00472 RF-1 domain KU217_06870 PF03462 PCRF domain KU217_06875 PF13847 Methyltransferase domain KU217_06875 PF17827 PrmC N-terminal domain KU217_06880 PF00528 Binding-protein-dependent transport system inner membrane component KU217_06890 PF12833 Helix-turn-helix domain KU217_06895 PF00106 short chain dehydrogenase KU217_06900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_06900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_06900 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_06905 PF00501 AMP-binding enzyme KU217_06905 PF13193 AMP-binding enzyme C-terminal domain KU217_06910 PF01613 Flavin reductase like domain KU217_06915 PF00899 ThiF family KU217_06920 PF03109 ABC1 family KU217_06935 PF03814 Potassium-transporting ATPase A subunit KU217_06945 PF02669 K+-transporting ATPase, c chain KU217_06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_06950 PF13493 Domain of unknown function (DUF4118) KU217_06950 PF00512 His Kinase A (phospho-acceptor) domain KU217_06950 PF02702 Osmosensitive K+ channel His kinase sensor domain KU217_06955 PF00072 Response regulator receiver domain KU217_06955 PF00486 Transcriptional regulatory protein, C terminal KU217_06960 PF00120 Glutamine synthetase, catalytic domain KU217_06970 PF03232 Ubiquinone biosynthesis protein COQ7 KU217_06975 PF07690 Major Facilitator Superfamily KU217_06980 PF07244 Surface antigen variable number repeat KU217_06980 PF01103 Surface antigen KU217_06980 PF17243 POTRA domain TamA domain 1 KU217_06995 PF00330 Aconitase family (aconitate hydratase) KU217_06995 PF06434 Aconitate hydratase 2 N-terminus KU217_06995 PF11791 Aconitate B N-terminal domain KU217_07005 PF00520 Ion transport protein KU217_07005 PF00027 Cyclic nucleotide-binding domain KU217_07010 PF07690 Major Facilitator Superfamily KU217_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_07025 PF03466 LysR substrate binding domain KU217_07030 PF04284 Protein of unknown function (DUF441) KU217_07040 PF01479 S4 domain KU217_07040 PF00849 RNA pseudouridylate synthase KU217_07055 PF00849 RNA pseudouridylate synthase KU217_07055 PF01479 S4 domain KU217_07060 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KU217_07065 PF08676 MutL C terminal dimerisation domain KU217_07065 PF01119 DNA mismatch repair protein, C-terminal domain KU217_07075 PF17209 Hfq protein KU217_07085 PF00881 Nitroreductase family KU217_07095 PF00149 Calcineurin-like phosphoesterase KU217_07100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU217_07105 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU217_07105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KU217_07110 PF02540 NAD synthase KU217_07110 PF00958 GMP synthase C terminal domain KU217_07110 PF00117 Glutamine amidotransferase class-I KU217_07115 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KU217_07120 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KU217_07125 PF13520 Amino acid permease KU217_07130 PF00171 Aldehyde dehydrogenase family KU217_07145 PF00465 Iron-containing alcohol dehydrogenase KU217_07150 PF05970 PIF1-like helicase KU217_07150 PF14493 Helix-turn-helix domain KU217_07160 PF02110 Hydroxyethylthiazole kinase family KU217_07175 PF01433 Peptidase family M1 domain KU217_07175 PF11940 Domain of unknown function (DUF3458) Ig-like fold KU217_07175 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KU217_07190 PF13953 PapC C-terminal domain KU217_07190 PF13954 PapC N-terminal domain KU217_07190 PF00577 Outer membrane usher protein KU217_07205 PF00106 short chain dehydrogenase KU217_07215 PF01817 Chorismate mutase type II KU217_07220 PF01037 Lrp/AsnC ligand binding domain KU217_07230 PF00440 Bacterial regulatory proteins, tetR family KU217_07235 PF00593 TonB dependent receptor KU217_07235 PF07715 TonB-dependent Receptor Plug Domain KU217_07240 PF00924 Mechanosensitive ion channel KU217_07270 PF07715 TonB-dependent Receptor Plug Domain KU217_07270 PF00593 TonB dependent receptor KU217_07290 PF00005 ABC transporter KU217_07290 PF12848 ABC transporter KU217_07295 PF00582 Universal stress protein family KU217_07320 PF00689 Cation transporting ATPase, C-terminus KU217_07320 PF00690 Cation transporter/ATPase, N-terminus KU217_07325 PF02308 MgtC family KU217_07330 PF03594 Benzoate membrane transport protein KU217_07335 PF01037 Lrp/AsnC ligand binding domain KU217_07340 PF01810 LysE type translocator KU217_07345 PF00923 Transaldolase/Fructose-6-phosphate aldolase KU217_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_07350 PF03466 LysR substrate binding domain KU217_07360 PF02803 Thiolase, C-terminal domain KU217_07360 PF00108 Thiolase, N-terminal domain KU217_07370 PF01575 MaoC like domain KU217_07375 PF00144 Beta-lactamase KU217_07385 PF07690 Major Facilitator Superfamily KU217_07390 PF12169 DNA polymerase III subunits gamma and tau domain III KU217_07390 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KU217_07390 PF12170 DNA polymerase III tau subunit V interacting with alpha KU217_07395 PF05506 Domain of unknown function (DUF756) KU217_07395 PF04185 Phosphoesterase family KU217_07400 PF03061 Thioesterase superfamily KU217_07405 PF00465 Iron-containing alcohol dehydrogenase KU217_07415 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU217_07420 PF01565 FAD binding domain KU217_07420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KU217_07445 PF01645 Conserved region in glutamate synthase KU217_07465 PF12832 MFS_1 like family KU217_07475 PF02785 Biotin carboxylase C-terminal domain KU217_07475 PF00289 Biotin carboxylase, N-terminal domain KU217_07475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_07480 PF00364 Biotin-requiring enzyme KU217_07485 PF01220 Dehydroquinase class II KU217_07490 PF11799 impB/mucB/samB family C-terminal domain KU217_07490 PF00817 impB/mucB/samB family KU217_07490 PF13438 Domain of unknown function (DUF4113) KU217_07500 PF00005 ABC transporter KU217_07505 PF00072 Response regulator receiver domain KU217_07505 PF00486 Transcriptional regulatory protein, C terminal KU217_07515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_07515 PF13806 Rieske-like [2Fe-2S] domain KU217_07515 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU217_07515 PF04324 BFD-like [2Fe-2S] binding domain KU217_07515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU217_07515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU217_07520 PF04324 BFD-like [2Fe-2S] binding domain KU217_07520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KU217_07520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KU217_07520 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_07520 PF18267 Rubredoxin NAD+ reductase C-terminal domain KU217_07525 PF01568 Molydopterin dinucleotide binding domain KU217_07525 PF00384 Molybdopterin oxidoreductase KU217_07525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU217_07525 PF04324 BFD-like [2Fe-2S] binding domain KU217_07530 PF12804 MobA-like NTP transferase domain KU217_07535 PF01568 Molydopterin dinucleotide binding domain KU217_07535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU217_07535 PF00384 Molybdopterin oxidoreductase KU217_07540 PF06463 Molybdenum Cofactor Synthesis C KU217_07540 PF04055 Radical SAM superfamily KU217_07550 PF02391 MoaE protein KU217_07555 PF01967 MoaC family KU217_07555 PF00994 Probable molybdopterin binding domain KU217_07560 PF00994 Probable molybdopterin binding domain KU217_07560 PF03454 MoeA C-terminal region (domain IV) KU217_07560 PF03453 MoeA N-terminal region (domain I and II) KU217_07565 PF01638 HxlR-like helix-turn-helix KU217_07570 PF00155 Aminotransferase class I and II KU217_07570 PF00392 Bacterial regulatory proteins, gntR family KU217_07575 PF00892 EamA-like transporter family KU217_07595 PF02635 DsrE/DsrF-like family KU217_07600 PF16363 GDP-mannose 4,6 dehydratase KU217_07605 PF10415 Fumarase C C-terminus KU217_07605 PF00206 Lyase KU217_07625 PF01266 FAD dependent oxidoreductase KU217_07635 PF02542 YgbB family KU217_07645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU217_07645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU217_07650 PF00440 Bacterial regulatory proteins, tetR family KU217_07655 PF00158 Sigma-54 interaction domain KU217_07655 PF02954 Bacterial regulatory protein, Fis family KU217_07655 PF00072 Response regulator receiver domain KU217_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_07660 PF00512 His Kinase A (phospho-acceptor) domain KU217_07660 PF00989 PAS fold KU217_07670 PF04055 Radical SAM superfamily KU217_07670 PF18693 TRAM domain KU217_07670 PF00919 Uncharacterized protein family UPF0004 KU217_07675 PF00696 Amino acid kinase family KU217_07680 PF01765 Ribosome recycling factor KU217_07685 PF01255 Putative undecaprenyl diphosphate synthase KU217_07695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KU217_07695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KU217_07695 PF13288 DXP reductoisomerase C-terminal domain KU217_07700 PF13180 PDZ domain KU217_07700 PF17820 PDZ domain KU217_07700 PF02163 Peptidase family M50 KU217_07705 PF07244 Surface antigen variable number repeat KU217_07705 PF01103 Surface antigen KU217_07715 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_07715 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KU217_07720 PF07977 FabA-like domain KU217_07725 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KU217_07725 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_07740 PF02631 RecX family KU217_07745 PF00154 recA bacterial DNA recombination protein KU217_07750 PF01479 S4 domain KU217_07755 PF13419 Haloacid dehalogenase-like hydrolase KU217_07780 PF01037 Lrp/AsnC ligand binding domain KU217_07785 PF00266 Aminotransferase class-V KU217_07790 PF00324 Amino acid permease KU217_07800 PF05922 Peptidase inhibitor I9 KU217_07800 PF00082 Subtilase family KU217_07805 PF01740 STAS domain KU217_07805 PF00916 Sulfate permease family KU217_07810 PF02586 SOS response associated peptidase (SRAP) KU217_07815 PF07995 Glucose / Sorbosone dehydrogenase KU217_07825 PF00563 EAL domain KU217_07825 PF00990 Diguanylate cyclase, GGDEF domain KU217_07825 PF03707 Bacterial signalling protein N terminal repeat KU217_07845 PF02378 Phosphotransferase system, EIIC KU217_07845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KU217_07850 PF00294 pfkB family carbohydrate kinase KU217_07855 PF02896 PEP-utilising enzyme, TIM barrel domain KU217_07855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KU217_07855 PF00381 PTS HPr component phosphorylation site KU217_07855 PF00391 PEP-utilising enzyme, mobile domain KU217_07855 PF05524 PEP-utilising enzyme, N-terminal KU217_07880 PF05525 Branched-chain amino acid transport protein KU217_07885 PF00557 Metallopeptidase family M24 KU217_07890 PF03466 LysR substrate binding domain KU217_07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_07900 PF00462 Glutaredoxin KU217_07905 PF00202 Aminotransferase class-III KU217_07910 PF00571 CBS domain KU217_07910 PF00478 IMP dehydrogenase / GMP reductase domain KU217_07935 PF00448 SRP54-type protein, GTPase domain KU217_07935 PF02881 SRP54-type protein, helical bundle domain KU217_07945 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KU217_07955 PF08173 Membrane bound YbgT-like protein KU217_07960 PF02322 Cytochrome bd terminal oxidase subunit II KU217_07965 PF01654 Cytochrome bd terminal oxidase subunit I KU217_07975 PF07290 Protein of unknown function (DUF1449) KU217_07985 PF00294 pfkB family carbohydrate kinase KU217_07990 PF07715 TonB-dependent Receptor Plug Domain KU217_07990 PF00593 TonB dependent receptor KU217_07995 PF05193 Peptidase M16 inactive domain KU217_07995 PF00675 Insulinase (Peptidase family M16) KU217_07995 PF08367 Peptidase M16C associated KU217_08000 PF02253 Phospholipase A1 KU217_08005 PF02386 Cation transport protein KU217_08010 PF02080 TrkA-C domain KU217_08010 PF02254 TrkA-N domain KU217_08015 PF00291 Pyridoxal-phosphate dependent enzyme KU217_08015 PF00585 C-terminal regulatory domain of Threonine dehydratase KU217_08020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KU217_08035 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU217_08035 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU217_08045 PF02617 ATP-dependent Clp protease adaptor protein ClpS KU217_08050 PF07724 AAA domain (Cdc48 subfamily) KU217_08050 PF17871 AAA lid domain KU217_08050 PF02861 Clp amino terminal domain, pathogenicity island component KU217_08050 PF10431 C-terminal, D2-small domain, of ClpB protein KU217_08050 PF00004 ATPase family associated with various cellular activities (AAA) KU217_08055 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KU217_08060 PF00793 DAHP synthetase I family KU217_08075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_08105 PF00117 Glutamine amidotransferase class-I KU217_08105 PF06418 CTP synthase N-terminus KU217_08110 PF00793 DAHP synthetase I family KU217_08115 PF03952 Enolase, N-terminal domain KU217_08115 PF00113 Enolase, C-terminal TIM barrel domain KU217_08120 PF04239 Protein of unknown function (DUF421) KU217_08125 PF04977 Septum formation initiator KU217_08130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KU217_08135 PF01144 Coenzyme A transferase KU217_08140 PF01144 Coenzyme A transferase KU217_08145 PF00108 Thiolase, N-terminal domain KU217_08145 PF02803 Thiolase, C-terminal domain KU217_08150 PF00206 Lyase KU217_08150 PF10397 Adenylosuccinate lyase C-terminus KU217_08155 PF00561 alpha/beta hydrolase fold KU217_08160 PF07690 Major Facilitator Superfamily KU217_08165 PF02627 Carboxymuconolactone decarboxylase family KU217_08170 PF00775 Dioxygenase KU217_08170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KU217_08175 PF00775 Dioxygenase KU217_08180 PF01487 Type I 3-dehydroquinase KU217_08185 PF05048 Periplasmic copper-binding protein (NosD) KU217_08190 PF04966 Carbohydrate-selective porin, OprB family KU217_08195 PF01011 PQQ enzyme repeat KU217_08195 PF13360 PQQ-like domain KU217_08205 PF04143 Sulphur transport KU217_08215 PF00753 Metallo-beta-lactamase superfamily KU217_08220 PF09339 IclR helix-turn-helix domain KU217_08220 PF01614 Bacterial transcriptional regulator KU217_08225 PF03466 LysR substrate binding domain KU217_08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_08230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_08230 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_08230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_08245 PF00106 short chain dehydrogenase KU217_08255 PF07690 Major Facilitator Superfamily KU217_08265 PF01425 Amidase KU217_08270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU217_08285 PF00355 Rieske [2Fe-2S] domain KU217_08285 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU217_08300 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_08300 PF00175 Oxidoreductase NAD-binding domain KU217_08305 PF01613 Flavin reductase like domain KU217_08310 PF12833 Helix-turn-helix domain KU217_08310 PF02311 AraC-like ligand binding domain KU217_08315 PF07833 Copper amine oxidase N-terminal domain KU217_08315 PF02727 Copper amine oxidase, N2 domain KU217_08315 PF02728 Copper amine oxidase, N3 domain KU217_08315 PF01179 Copper amine oxidase, enzyme domain KU217_08325 PF00171 Aldehyde dehydrogenase family KU217_08330 PF01804 Penicillin amidase KU217_08335 PF12146 Serine aminopeptidase, S33 KU217_08340 PF02803 Thiolase, C-terminal domain KU217_08340 PF00108 Thiolase, N-terminal domain KU217_08345 PF01144 Coenzyme A transferase KU217_08350 PF01144 Coenzyme A transferase KU217_08355 PF04444 Catechol dioxygenase N terminus KU217_08355 PF00775 Dioxygenase KU217_08360 PF02426 Muconolactone delta-isomerase KU217_08365 PF13378 Enolase C-terminal domain-like KU217_08365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU217_08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_08370 PF03466 LysR substrate binding domain KU217_08380 PF00392 Bacterial regulatory proteins, gntR family KU217_08380 PF07729 FCD domain KU217_08385 PF00920 Dehydratase family KU217_08390 PF07690 Major Facilitator Superfamily KU217_08400 PF00171 Aldehyde dehydrogenase family KU217_08410 PF00561 alpha/beta hydrolase fold KU217_08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_08415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_08425 PF01872 RibD C-terminal domain KU217_08435 PF00376 MerR family regulatory protein KU217_08435 PF09278 MerR, DNA binding KU217_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_08455 PF12706 Beta-lactamase superfamily domain KU217_08460 PF00440 Bacterial regulatory proteins, tetR family KU217_08460 PF08359 YsiA-like protein, C-terminal region KU217_08465 PF03466 LysR substrate binding domain KU217_08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_08480 PF00106 short chain dehydrogenase KU217_08485 PF01575 MaoC like domain KU217_08490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_08490 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_08490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_08490 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU217_08500 PF00501 AMP-binding enzyme KU217_08500 PF13193 AMP-binding enzyme C-terminal domain KU217_08515 PF00145 C-5 cytosine-specific DNA methylase KU217_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_08520 PF00512 His Kinase A (phospho-acceptor) domain KU217_08540 PF07690 Major Facilitator Superfamily KU217_08545 PF04909 Amidohydrolase KU217_08555 PF07702 UTRA domain KU217_08555 PF00392 Bacterial regulatory proteins, gntR family KU217_08560 PF08450 SMP-30/Gluconolactonase/LRE-like region KU217_08570 PF03466 LysR substrate binding domain KU217_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_08590 PF07690 Major Facilitator Superfamily KU217_08595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU217_08595 PF01842 ACT domain KU217_08595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU217_08600 PF03737 Aldolase/RraA KU217_08610 PF00529 HlyD membrane-fusion protein of T1SS KU217_08610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_08625 PF00171 Aldehyde dehydrogenase family KU217_08630 PF00920 Dehydratase family KU217_08640 PF03466 LysR substrate binding domain KU217_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_08645 PF01370 NAD dependent epimerase/dehydratase family KU217_08650 PF07690 Major Facilitator Superfamily KU217_08655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU217_08655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU217_08660 PF06719 AraC-type transcriptional regulator N-terminus KU217_08660 PF12833 Helix-turn-helix domain KU217_08665 PF08240 Alcohol dehydrogenase GroES-like domain KU217_08665 PF00107 Zinc-binding dehydrogenase KU217_08675 PF01032 FecCD transport family KU217_08680 PF00005 ABC transporter KU217_08700 PF07859 alpha/beta hydrolase fold KU217_08705 PF00561 alpha/beta hydrolase fold KU217_08715 PF00440 Bacterial regulatory proteins, tetR family KU217_08725 PF14572 Phosphoribosyl synthetase-associated domain KU217_08725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU217_08730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KU217_08745 PF13533 Biotin-lipoyl like KU217_08750 PF07690 Major Facilitator Superfamily KU217_08775 PF01975 Survival protein SurE KU217_08810 PF13673 Acetyltransferase (GNAT) domain KU217_08820 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family KU217_08845 PF12146 Serine aminopeptidase, S33 KU217_08850 PF02311 AraC-like ligand binding domain KU217_08850 PF12833 Helix-turn-helix domain KU217_08860 PF16527 Two-component sensor protein CpxA, periplasmic domain KU217_08860 PF00672 HAMP domain KU217_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_08860 PF00512 His Kinase A (phospho-acceptor) domain KU217_08865 PF00072 Response regulator receiver domain KU217_08865 PF00486 Transcriptional regulatory protein, C terminal KU217_08870 PF00529 HlyD membrane-fusion protein of T1SS KU217_08870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_08875 PF00873 AcrB/AcrD/AcrF family KU217_08900 PF16970 Type-1 fimbrial protein, A KU217_08905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU217_08905 PF02753 Pili assembly chaperone PapD, C-terminal domain KU217_08910 PF13953 PapC C-terminal domain KU217_08910 PF00577 Outer membrane usher protein KU217_08910 PF13954 PapC N-terminal domain KU217_08915 PF00419 Fimbrial protein KU217_08925 PF00107 Zinc-binding dehydrogenase KU217_08925 PF08240 Alcohol dehydrogenase GroES-like domain KU217_08935 PF00199 Catalase KU217_08950 PF13091 PLD-like domain KU217_08965 PF01244 Membrane dipeptidase (Peptidase family M19) KU217_08970 PF04055 Radical SAM superfamily KU217_08970 PF13186 Iron-sulfur cluster-binding domain KU217_08975 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KU217_08980 PF03070 TENA/THI-4/PQQC family KU217_08985 PF12706 Beta-lactamase superfamily domain KU217_08990 PF08042 PqqA family KU217_08995 PF02503 Polyphosphate kinase middle domain KU217_08995 PF13090 Polyphosphate kinase C-terminal domain 2 KU217_08995 PF17941 Polyphosphate kinase C-terminal domain 1 KU217_08995 PF13089 Polyphosphate kinase N-terminal domain KU217_09000 PF00149 Calcineurin-like phosphoesterase KU217_09010 PF00550 Phosphopantetheine attachment site KU217_09010 PF00857 Isochorismatase family KU217_09015 PF00106 short chain dehydrogenase KU217_09020 PF00005 ABC transporter KU217_09020 PF03459 TOBE domain KU217_09025 PF00528 Binding-protein-dependent transport system inner membrane component KU217_09035 PF03459 TOBE domain KU217_09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_09040 PF00355 Rieske [2Fe-2S] domain KU217_09040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU217_09045 PF00866 Ring hydroxylating beta subunit KU217_09050 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_09050 PF00970 Oxidoreductase FAD-binding domain KU217_09050 PF00175 Oxidoreductase NAD-binding domain KU217_09055 PF14525 AraC-binding-like domain KU217_09055 PF12833 Helix-turn-helix domain KU217_09065 PF01613 Flavin reductase like domain KU217_09080 PF01738 Dienelactone hydrolase family KU217_09085 PF07690 Major Facilitator Superfamily KU217_09090 PF12833 Helix-turn-helix domain KU217_09090 PF06719 AraC-type transcriptional regulator N-terminus KU217_09110 PF00440 Bacterial regulatory proteins, tetR family KU217_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_09130 PF03466 LysR substrate binding domain KU217_09135 PF01144 Coenzyme A transferase KU217_09140 PF01144 Coenzyme A transferase KU217_09145 PF02667 Short chain fatty acid transporter KU217_09150 PF00108 Thiolase, N-terminal domain KU217_09150 PF02803 Thiolase, C-terminal domain KU217_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_09155 PF03466 LysR substrate binding domain KU217_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_09160 PF03466 LysR substrate binding domain KU217_09175 PF10415 Fumarase C C-terminus KU217_09175 PF00206 Lyase KU217_09180 PF07715 TonB-dependent Receptor Plug Domain KU217_09180 PF00593 TonB dependent receptor KU217_09185 PF00083 Sugar (and other) transporter KU217_09200 PF00005 ABC transporter KU217_09205 PF00528 Binding-protein-dependent transport system inner membrane component KU217_09210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU217_09225 PF07702 UTRA domain KU217_09225 PF00392 Bacterial regulatory proteins, gntR family KU217_09235 PF02525 Flavodoxin-like fold KU217_09240 PF01638 HxlR-like helix-turn-helix KU217_09245 PF06445 GyrI-like small molecule binding domain KU217_09245 PF12833 Helix-turn-helix domain KU217_09260 PF01925 Sulfite exporter TauE/SafE KU217_09265 PF04273 Putative phosphatase (DUF442) KU217_09265 PF00753 Metallo-beta-lactamase superfamily KU217_09270 PF04273 Putative phosphatase (DUF442) KU217_09270 PF00753 Metallo-beta-lactamase superfamily KU217_09275 PF02954 Bacterial regulatory protein, Fis family KU217_09275 PF00072 Response regulator receiver domain KU217_09275 PF00158 Sigma-54 interaction domain KU217_09280 PF01062 Bestrophin, RFP-TM, chloride channel KU217_09285 PF08240 Alcohol dehydrogenase GroES-like domain KU217_09285 PF00107 Zinc-binding dehydrogenase KU217_09290 PF00106 short chain dehydrogenase KU217_09295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_09295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU217_09300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU217_09300 PF00364 Biotin-requiring enzyme KU217_09300 PF02817 e3 binding domain KU217_09305 PF02780 Transketolase, C-terminal domain KU217_09305 PF02779 Transketolase, pyrimidine binding domain KU217_09310 PF00676 Dehydrogenase E1 component KU217_09315 PF04055 Radical SAM superfamily KU217_09330 PF08448 PAS fold KU217_09330 PF00990 Diguanylate cyclase, GGDEF domain KU217_09335 PF01264 Chorismate synthase KU217_09340 PF05175 Methyltransferase small domain KU217_09345 PF00291 Pyridoxal-phosphate dependent enzyme KU217_09355 PF01434 Peptidase family M41 KU217_09355 PF17862 AAA+ lid domain KU217_09355 PF00004 ATPase family associated with various cellular activities (AAA) KU217_09365 PF05166 YcgL domain KU217_09385 PF00570 HRDC domain KU217_09385 PF01612 3'-5' exonuclease KU217_09390 PF02132 RecR protein KU217_09390 PF13662 Toprim domain KU217_09395 PF02575 YbaB/EbfC DNA-binding family KU217_09405 PF01053 Cys/Met metabolism PLP-dependent enzyme KU217_09410 PF00561 alpha/beta hydrolase fold KU217_09415 PF08241 Methyltransferase domain KU217_09445 PF01230 HIT domain KU217_09480 PF00005 ABC transporter KU217_09485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_09495 PF02684 Lipid-A-disaccharide synthetase KU217_09500 PF00593 TonB dependent receptor KU217_09500 PF07715 TonB-dependent Receptor Plug Domain KU217_09520 PF01925 Sulfite exporter TauE/SafE KU217_09525 PF00793 DAHP synthetase I family KU217_09530 PF02654 Cobalamin-5-phosphate synthase KU217_09540 PF00300 Histidine phosphatase superfamily (branch 1) KU217_09545 PF02277 Phosphoribosyltransferase KU217_09550 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KU217_09560 PF13419 Haloacid dehalogenase-like hydrolase KU217_09585 PF00593 TonB dependent receptor KU217_09585 PF07715 TonB-dependent Receptor Plug Domain KU217_09590 PF03737 Aldolase/RraA KU217_09600 PF06276 Ferric iron reductase FhuF-like transporter KU217_09600 PF04183 IucA / IucC family KU217_09605 PF06276 Ferric iron reductase FhuF-like transporter KU217_09605 PF04183 IucA / IucC family KU217_09610 PF07690 Major Facilitator Superfamily KU217_09615 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KU217_09620 PF04183 IucA / IucC family KU217_09620 PF06276 Ferric iron reductase FhuF-like transporter KU217_09625 PF04073 Aminoacyl-tRNA editing domain KU217_09635 PF03109 ABC1 family KU217_09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_09640 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_09640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_09645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_09645 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_09645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_09650 PF00487 Fatty acid desaturase KU217_09655 PF12833 Helix-turn-helix domain KU217_09655 PF12852 Cupin KU217_09660 PF00639 PPIC-type PPIASE domain KU217_09660 PF09312 SurA N-terminal domain KU217_09665 PF00216 Bacterial DNA-binding protein KU217_09680 PF02082 Transcriptional regulator KU217_09685 PF00266 Aminotransferase class-V KU217_09690 PF01592 NifU-like N terminal domain KU217_09695 PF01521 Iron-sulphur cluster biosynthesis KU217_09700 PF00226 DnaJ domain KU217_09700 PF07743 HSCB C-terminal oligomerisation domain KU217_09705 PF00012 Hsp70 protein KU217_09710 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_09715 PF00211 Adenylate and Guanylate cyclase catalytic domain KU217_09725 PF17757 UvrB interaction domain KU217_09725 PF03461 TRCF domain KU217_09725 PF02559 CarD-like/TRCF domain KU217_09725 PF00270 DEAD/DEAH box helicase KU217_09725 PF00271 Helicase conserved C-terminal domain KU217_09745 PF03737 Aldolase/RraA KU217_09750 PF13460 NAD(P)H-binding KU217_09755 PF01649 Ribosomal protein S20 KU217_09765 PF00459 Inositol monophosphatase family KU217_09780 PF00005 ABC transporter KU217_09780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU217_09785 PF00528 Binding-protein-dependent transport system inner membrane component KU217_09790 PF00528 Binding-protein-dependent transport system inner membrane component KU217_09795 PF01432 Peptidase family M3 KU217_09810 PF00593 TonB dependent receptor KU217_09810 PF07715 TonB-dependent Receptor Plug Domain KU217_09820 PF01618 MotA/TolQ/ExbB proton channel family KU217_09825 PF02472 Biopolymer transport protein ExbD/TolR KU217_09830 PF02472 Biopolymer transport protein ExbD/TolR KU217_09840 PF01274 Malate synthase KU217_09845 PF03969 AFG1-like ATPase KU217_09855 PF00743 Flavin-binding monooxygenase-like KU217_09865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KU217_09875 PF00216 Bacterial DNA-binding protein KU217_09880 PF00575 S1 RNA binding domain KU217_09885 PF02224 Cytidylate kinase KU217_09895 PF14437 MafB19-like deaminase KU217_09905 PF03167 Uracil DNA glycosylase superfamily KU217_09915 PF03934 Type II secretion system (T2SS), protein K KU217_09920 PF11612 Type II secretion system (T2SS), protein J KU217_09920 PF07963 Prokaryotic N-terminal methylation motif KU217_09925 PF07963 Prokaryotic N-terminal methylation motif KU217_09925 PF02501 Type II secretion system (T2SS), protein I KU217_09940 PF01026 TatD related DNase KU217_09950 PF09115 DNA polymerase III, delta subunit, C terminal KU217_09955 PF02348 Cytidylyltransferase KU217_09960 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KU217_09965 PF00664 ABC transporter transmembrane region KU217_09965 PF00005 ABC transporter KU217_09975 PF01618 MotA/TolQ/ExbB proton channel family KU217_09980 PF17762 HTH domain found in ParB protein KU217_09980 PF02195 ParB-like nuclease domain KU217_09985 PF13614 AAA domain KU217_09990 PF02527 rRNA small subunit methyltransferase G KU217_09995 PF00483 Nucleotidyl transferase KU217_10000 PF01636 Phosphotransferase enzyme family KU217_10005 PF04453 LPS transport system D KU217_10005 PF03968 OstA-like protein KU217_10010 PF00639 PPIC-type PPIASE domain KU217_10010 PF09312 SurA N-terminal domain KU217_10015 PF01116 Fructose-bisphosphate aldolase class-II KU217_10025 PF00162 Phosphoglycerate kinase KU217_10035 PF02545 Maf-like protein KU217_10040 PF08007 Cupin superfamily protein KU217_10055 PF00375 Sodium:dicarboxylate symporter family KU217_10060 PF06912 Protein of unknown function (DUF1275) KU217_10065 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KU217_10070 PF00664 ABC transporter transmembrane region KU217_10070 PF00005 ABC transporter KU217_10080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU217_10080 PF12833 Helix-turn-helix domain KU217_10085 PF01597 Glycine cleavage H-protein KU217_10090 PF02146 Sir2 family KU217_10095 PF00474 Sodium:solute symporter family KU217_10100 PF01037 Lrp/AsnC ligand binding domain KU217_10105 PF00171 Aldehyde dehydrogenase family KU217_10105 PF14850 DNA-binding domain of Proline dehydrogenase KU217_10105 PF01619 Proline dehydrogenase KU217_10105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KU217_10110 PF04229 GrpB protein KU217_10115 PF05958 tRNA (Uracil-5-)-methyltransferase KU217_10125 PF09992 Phosphodiester glycosidase KU217_10135 PF04264 YceI-like domain KU217_10145 PF02779 Transketolase, pyrimidine binding domain KU217_10145 PF02780 Transketolase, C-terminal domain KU217_10145 PF00456 Transketolase, thiamine diphosphate binding domain KU217_10150 PF02773 S-adenosylmethionine synthetase, C-terminal domain KU217_10150 PF02772 S-adenosylmethionine synthetase, central domain KU217_10150 PF00438 S-adenosylmethionine synthetase, N-terminal domain KU217_10170 PF00905 Penicillin binding protein transpeptidase domain KU217_10185 PF02075 Crossover junction endodeoxyribonuclease RuvC KU217_10190 PF01256 Carbohydrate kinase KU217_10190 PF03853 YjeF-related protein N-terminus KU217_10195 PF08331 Domain of unknown function (DUF1730) KU217_10200 PF06968 Biotin and Thiamin Synthesis associated domain KU217_10200 PF04055 Radical SAM superfamily KU217_10215 PF16970 Type-1 fimbrial protein, A KU217_10220 PF02753 Pili assembly chaperone PapD, C-terminal domain KU217_10220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KU217_10225 PF13953 PapC C-terminal domain KU217_10225 PF13954 PapC N-terminal domain KU217_10225 PF00577 Outer membrane usher protein KU217_10245 PF00892 EamA-like transporter family KU217_10255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU217_10265 PF03466 LysR substrate binding domain KU217_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10285 PF00440 Bacterial regulatory proteins, tetR family KU217_10295 PF01709 Transcriptional regulator KU217_10300 PF01037 Lrp/AsnC ligand binding domain KU217_10310 PF00005 ABC transporter KU217_10315 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10320 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU217_10335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_10345 PF00296 Luciferase-like monooxygenase KU217_10350 PF03180 NLPA lipoprotein KU217_10355 PF03180 NLPA lipoprotein KU217_10360 PF00005 ABC transporter KU217_10360 PF09383 NIL domain KU217_10365 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10370 PF01926 50S ribosome-binding GTPase KU217_10370 PF06071 Protein of unknown function (DUF933) KU217_10395 PF03591 AzlC protein KU217_10400 PF05437 Branched-chain amino acid transport protein (AzlD) KU217_10410 PF02222 ATP-grasp domain KU217_10415 PF01909 Nucleotidyltransferase domain KU217_10415 PF08335 GlnD PII-uridylyltransferase KU217_10415 PF01966 HD domain KU217_10420 PF00155 Aminotransferase class I and II KU217_10430 PF12852 Cupin KU217_10430 PF12833 Helix-turn-helix domain KU217_10435 PF00255 Glutathione peroxidase KU217_10440 PF01641 SelR domain KU217_10445 PF00155 Aminotransferase class I and II KU217_10450 PF00375 Sodium:dicarboxylate symporter family KU217_10455 PF00710 Asparaginase, N-terminal KU217_10455 PF17763 Glutaminase/Asparaginase C-terminal domain KU217_10460 PF14579 Helix-hairpin-helix motif KU217_10460 PF02811 PHP domain KU217_10460 PF01336 OB-fold nucleic acid binding domain KU217_10460 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU217_10460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU217_10465 PF00588 SpoU rRNA Methylase family KU217_10470 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_10485 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_10485 PF13192 Thioredoxin domain KU217_10500 PF03466 LysR substrate binding domain KU217_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10505 PF01758 Sodium Bile acid symporter family KU217_10510 PF01022 Bacterial regulatory protein, arsR family KU217_10515 PF03960 ArsC family KU217_10525 PF01979 Amidohydrolase family KU217_10525 PF13382 Adenine deaminase C-terminal domain KU217_10535 PF03466 LysR substrate binding domain KU217_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU217_10550 PF01177 Asp/Glu/Hydantoin racemase KU217_10555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KU217_10560 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10565 PF00005 ABC transporter KU217_10570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU217_10580 PF00083 Sugar (and other) transporter KU217_10585 PF00296 Luciferase-like monooxygenase KU217_10600 PF01654 Cytochrome bd terminal oxidase subunit I KU217_10605 PF02322 Cytochrome bd terminal oxidase subunit II KU217_10615 PF00392 Bacterial regulatory proteins, gntR family KU217_10615 PF00155 Aminotransferase class I and II KU217_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10620 PF03466 LysR substrate binding domain KU217_10645 PF00698 Acyl transferase domain KU217_10650 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KU217_10660 PF01039 Carboxyl transferase domain KU217_10665 PF06857 Malonate decarboxylase delta subunit (MdcD) KU217_10670 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KU217_10675 PF16957 Malonate decarboxylase, alpha subunit, transporter KU217_10680 PF03466 LysR substrate binding domain KU217_10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10690 PF07690 Major Facilitator Superfamily KU217_10705 PF00155 Aminotransferase class I and II KU217_10705 PF00392 Bacterial regulatory proteins, gntR family KU217_10710 PF04172 LrgB-like family KU217_10715 PF03788 LrgA family KU217_10720 PF03466 LysR substrate binding domain KU217_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10725 PF14834 Glutathione S-transferase, C-terminal domain KU217_10725 PF02798 Glutathione S-transferase, N-terminal domain KU217_10730 PF02798 Glutathione S-transferase, N-terminal domain KU217_10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10735 PF03466 LysR substrate binding domain KU217_10745 PF00581 Rhodanese-like domain KU217_10750 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_10765 PF01810 LysE type translocator KU217_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10770 PF03466 LysR substrate binding domain KU217_10775 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU217_10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU217_10785 PF00005 ABC transporter KU217_10790 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10795 PF00528 Binding-protein-dependent transport system inner membrane component KU217_10810 PF00072 Response regulator receiver domain KU217_10815 PF00072 Response regulator receiver domain KU217_10815 PF00512 His Kinase A (phospho-acceptor) domain KU217_10815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_10815 PF09308 LuxQ, periplasmic KU217_10825 PF01037 Lrp/AsnC ligand binding domain KU217_10825 PF13404 AsnC-type helix-turn-helix domain KU217_10835 PF00717 Peptidase S24-like KU217_10860 PF18011 C-terminal domain found in long catalases KU217_10860 PF06628 Catalase-related immune-responsive KU217_10860 PF00199 Catalase KU217_10870 PF00994 Probable molybdopterin binding domain KU217_10870 PF18146 Damage-inducible protein CinA KH domain KU217_10870 PF02464 Competence-damaged protein KU217_10905 PF03466 LysR substrate binding domain KU217_10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10925 PF00501 AMP-binding enzyme KU217_10925 PF13193 AMP-binding enzyme C-terminal domain KU217_10930 PF00440 Bacterial regulatory proteins, tetR family KU217_10935 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_10935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_10935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_10940 PF01039 Carboxyl transferase domain KU217_10945 PF00378 Enoyl-CoA hydratase/isomerase KU217_10950 PF00289 Biotin carboxylase, N-terminal domain KU217_10950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_10950 PF18140 Propionyl-coenzyme A carboxylase BT domain KU217_10950 PF00364 Biotin-requiring enzyme KU217_10950 PF02785 Biotin carboxylase C-terminal domain KU217_10955 PF00682 HMGL-like KU217_10960 PF03466 LysR substrate binding domain KU217_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_10975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_10975 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_10975 PF12806 Acetyl-CoA dehydrogenase C-terminal like KU217_10975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_10985 PF07690 Major Facilitator Superfamily KU217_10995 PF01144 Coenzyme A transferase KU217_11000 PF01144 Coenzyme A transferase KU217_11005 PF07690 Major Facilitator Superfamily KU217_11010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_11010 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_11010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_11015 PF00378 Enoyl-CoA hydratase/isomerase KU217_11025 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU217_11025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU217_11025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU217_11030 PF02803 Thiolase, C-terminal domain KU217_11030 PF00108 Thiolase, N-terminal domain KU217_11035 PF09339 IclR helix-turn-helix domain KU217_11040 PF07690 Major Facilitator Superfamily KU217_11045 PF03060 Nitronate monooxygenase KU217_11050 PF00378 Enoyl-CoA hydratase/isomerase KU217_11055 PF09339 IclR helix-turn-helix domain KU217_11060 PF02515 CoA-transferase family III KU217_11065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_11065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_11065 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_11070 PF07690 Major Facilitator Superfamily KU217_11075 PF13419 Haloacid dehalogenase-like hydrolase KU217_11080 PF00266 Aminotransferase class-V KU217_11085 PF01266 FAD dependent oxidoreductase KU217_11090 PF00528 Binding-protein-dependent transport system inner membrane component KU217_11095 PF00005 ABC transporter KU217_11095 PF08402 TOBE domain KU217_11105 PF00392 Bacterial regulatory proteins, gntR family KU217_11105 PF07702 UTRA domain KU217_11110 PF01494 FAD binding domain KU217_11115 PF09339 IclR helix-turn-helix domain KU217_11115 PF01614 Bacterial transcriptional regulator KU217_11120 PF02525 Flavodoxin-like fold KU217_11130 PF02627 Carboxymuconolactone decarboxylase family KU217_11135 PF00171 Aldehyde dehydrogenase family KU217_11145 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KU217_11155 PF00171 Aldehyde dehydrogenase family KU217_11160 PF00296 Luciferase-like monooxygenase KU217_11165 PF01613 Flavin reductase like domain KU217_11170 PF12697 Alpha/beta hydrolase family KU217_11190 PF01292 Prokaryotic cytochrome b561 KU217_11195 PF00199 Catalase KU217_11200 PF07690 Major Facilitator Superfamily KU217_11205 PF00682 HMGL-like KU217_11210 PF02515 CoA-transferase family III KU217_11225 PF06719 AraC-type transcriptional regulator N-terminus KU217_11225 PF12833 Helix-turn-helix domain KU217_11245 PF03061 Thioesterase superfamily KU217_11250 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_11255 PF08223 PaaX-like protein C-terminal domain KU217_11255 PF07848 PaaX-like protein KU217_11260 PF00501 AMP-binding enzyme KU217_11260 PF14535 AMP-binding enzyme C-terminal domain KU217_11265 PF00108 Thiolase, N-terminal domain KU217_11265 PF02803 Thiolase, C-terminal domain KU217_11270 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KU217_11270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU217_11270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU217_11275 PF00378 Enoyl-CoA hydratase/isomerase KU217_11280 PF00378 Enoyl-CoA hydratase/isomerase KU217_11285 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_11285 PF00970 Oxidoreductase FAD-binding domain KU217_11285 PF00175 Oxidoreductase NAD-binding domain KU217_11290 PF01883 Iron-sulfur cluster assembly protein KU217_11295 PF05138 Phenylacetic acid catabolic protein KU217_11300 PF06243 Phenylacetic acid degradation B KU217_11305 PF05138 Phenylacetic acid catabolic protein KU217_11310 PF01575 MaoC like domain KU217_11310 PF00171 Aldehyde dehydrogenase family KU217_11315 PF03315 Serine dehydratase beta chain KU217_11315 PF03313 Serine dehydratase alpha chain KU217_11320 PF13520 Amino acid permease KU217_11325 PF00171 Aldehyde dehydrogenase family KU217_11330 PF00083 Sugar (and other) transporter KU217_11340 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_11340 PF04324 BFD-like [2Fe-2S] binding domain KU217_11350 PF01266 FAD dependent oxidoreductase KU217_11355 PF05544 Proline racemase KU217_11360 PF00392 Bacterial regulatory proteins, gntR family KU217_11370 PF00701 Dihydrodipicolinate synthetase family KU217_11380 PF00376 MerR family regulatory protein KU217_11380 PF09278 MerR, DNA binding KU217_11390 PF02677 Epoxyqueuosine reductase QueH KU217_11405 PF07690 Major Facilitator Superfamily KU217_11410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU217_11420 PF03466 LysR substrate binding domain KU217_11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_11440 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KU217_11445 PF06812 ImpA, N-terminal, type VI secretion system KU217_11450 PF10431 C-terminal, D2-small domain, of ClpB protein KU217_11450 PF00004 ATPase family associated with various cellular activities (AAA) KU217_11450 PF07724 AAA domain (Cdc48 subfamily) KU217_11450 PF17871 AAA lid domain KU217_11460 PF01389 OmpA-like transmembrane domain KU217_11460 PF00691 OmpA family KU217_11470 PF06761 Intracellular multiplication and human macrophage-killing KU217_11470 PF14331 ImcF-related N-terminal domain KU217_11470 PF06744 Type VI secretion protein IcmF C-terminal KU217_11485 PF05947 Type VI secretion system, TssF KU217_11500 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU217_11525 PF00005 ABC transporter KU217_11530 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU217_11535 PF01425 Amidase KU217_11540 PF01402 Ribbon-helix-helix protein, copG family KU217_11540 PF08753 NikR C terminal nickel binding domain KU217_11550 PF01638 HxlR-like helix-turn-helix KU217_11555 PF02525 Flavodoxin-like fold KU217_11560 PF00289 Biotin carboxylase, N-terminal domain KU217_11560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_11560 PF02785 Biotin carboxylase C-terminal domain KU217_11575 PF08240 Alcohol dehydrogenase GroES-like domain KU217_11575 PF13823 Alcohol dehydrogenase GroES-associated KU217_11575 PF00107 Zinc-binding dehydrogenase KU217_11585 PF00440 Bacterial regulatory proteins, tetR family KU217_11600 PF13332 Hemagglutinin repeat KU217_11600 PF13018 Extended Signal Peptide of Type V secretion system KU217_11600 PF04829 Pre-toxin domain with VENN motif KU217_11600 PF05860 haemagglutination activity domain KU217_11605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KU217_11605 PF08479 POTRA domain, ShlB-type KU217_11605 PF17287 POTRA domain KU217_11610 PF00654 Voltage gated chloride channel KU217_11615 PF02785 Biotin carboxylase C-terminal domain KU217_11615 PF00289 Biotin carboxylase, N-terminal domain KU217_11615 PF00364 Biotin-requiring enzyme KU217_11615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU217_11625 PF07286 Protein of unknown function (DUF1445) KU217_11630 PF03746 LamB/YcsF family KU217_11635 PF01566 Natural resistance-associated macrophage protein KU217_11640 PF03466 LysR substrate binding domain KU217_11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_11670 PF05593 RHS Repeat KU217_11670 PF03527 RHS protein KU217_11675 PF04717 Type VI secretion system, phage-baseplate injector KU217_11675 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU217_11675 PF13296 Putative type VI secretion system Rhs element Vgr KU217_11685 PF13419 Haloacid dehalogenase-like hydrolase KU217_11705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU217_11705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU217_11725 PF07690 Major Facilitator Superfamily KU217_11735 PF03279 Bacterial lipid A biosynthesis acyltransferase KU217_11740 PF03707 Bacterial signalling protein N terminal repeat KU217_11740 PF00563 EAL domain KU217_11740 PF00990 Diguanylate cyclase, GGDEF domain KU217_11745 PF00892 EamA-like transporter family KU217_11750 PF01037 Lrp/AsnC ligand binding domain KU217_11755 PF01624 MutS domain I KU217_11755 PF05188 MutS domain II KU217_11755 PF05192 MutS domain III KU217_11755 PF05190 MutS family domain IV KU217_11755 PF00488 MutS domain V KU217_11765 PF11953 Domain of unknown function (DUF3470) KU217_11765 PF00037 4Fe-4S binding domain KU217_11775 PF01596 O-methyltransferase KU217_11785 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_11790 PF01205 Uncharacterized protein family UPF0029 KU217_11800 PF00664 ABC transporter transmembrane region KU217_11800 PF03412 Peptidase C39 family KU217_11800 PF00005 ABC transporter KU217_11805 PF02321 Outer membrane efflux protein KU217_11810 PF12399 Branched-chain amino acid ATP-binding cassette transporter KU217_11810 PF00005 ABC transporter KU217_11815 PF03968 OstA-like protein KU217_11830 PF01380 SIS domain KU217_11830 PF00571 CBS domain KU217_11835 PF09190 DALR domain KU217_11835 PF01406 tRNA synthetases class I (C) catalytic domain KU217_11860 PF01638 HxlR-like helix-turn-helix KU217_11865 PF07690 Major Facilitator Superfamily KU217_11890 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU217_11890 PF03807 NADP oxidoreductase coenzyme F420-dependent KU217_11900 PF00313 'Cold-shock' DNA-binding domain KU217_11905 PF01810 LysE type translocator KU217_11935 PF13742 OB-fold nucleic acid binding domain KU217_11935 PF02601 Exonuclease VII, large subunit KU217_11970 PF09278 MerR, DNA binding KU217_11970 PF00376 MerR family regulatory protein KU217_11975 PF00403 Heavy-metal-associated domain KU217_11985 PF02954 Bacterial regulatory protein, Fis family KU217_11985 PF00158 Sigma-54 interaction domain KU217_11985 PF06505 Activator of aromatic catabolism KU217_11985 PF02830 V4R domain KU217_11990 PF06099 Phenol hydroxylase subunit KU217_11995 PF02332 Methane/Phenol/Toluene Hydroxylase KU217_12000 PF02406 MmoB/DmpM family KU217_12005 PF02332 Methane/Phenol/Toluene Hydroxylase KU217_12005 PF04945 YHS domain KU217_12015 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_12015 PF00970 Oxidoreductase FAD-binding domain KU217_12015 PF00175 Oxidoreductase NAD-binding domain KU217_12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_12025 PF03466 LysR substrate binding domain KU217_12030 PF00355 Rieske [2Fe-2S] domain KU217_12030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU217_12035 PF00866 Ring hydroxylating beta subunit KU217_12040 PF00970 Oxidoreductase FAD-binding domain KU217_12040 PF00175 Oxidoreductase NAD-binding domain KU217_12040 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_12045 PF00106 short chain dehydrogenase KU217_12050 PF03594 Benzoate membrane transport protein KU217_12055 PF07690 Major Facilitator Superfamily KU217_12065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KU217_12065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KU217_12070 PF00270 DEAD/DEAH box helicase KU217_12070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KU217_12070 PF00271 Helicase conserved C-terminal domain KU217_12070 PF04408 Helicase associated domain (HA2) KU217_12070 PF11898 Domain of unknown function (DUF3418) KU217_12075 PF00578 AhpC/TSA family KU217_12075 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU217_12095 PF13192 Thioredoxin domain KU217_12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_12105 PF00043 Glutathione S-transferase, C-terminal domain KU217_12105 PF02798 Glutathione S-transferase, N-terminal domain KU217_12115 PF02390 Putative methyltransferase KU217_12140 PF00043 Glutathione S-transferase, C-terminal domain KU217_12140 PF13417 Glutathione S-transferase, N-terminal domain KU217_12150 PF00691 OmpA family KU217_12150 PF13488 Glycine zipper KU217_12155 PF01979 Amidohydrolase family KU217_12160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU217_12160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU217_12170 PF10672 S-adenosylmethionine-dependent methyltransferase KU217_12170 PF02926 THUMP domain KU217_12170 PF01170 Putative RNA methylase family UPF0020 KU217_12185 PF10431 C-terminal, D2-small domain, of ClpB protein KU217_12185 PF02861 Clp amino terminal domain, pathogenicity island component KU217_12185 PF07724 AAA domain (Cdc48 subfamily) KU217_12185 PF00004 ATPase family associated with various cellular activities (AAA) KU217_12185 PF17871 AAA lid domain KU217_12200 PF02566 OsmC-like protein KU217_12210 PF00027 Cyclic nucleotide-binding domain KU217_12210 PF13545 Crp-like helix-turn-helix domain KU217_12215 PF00248 Aldo/keto reductase family KU217_12230 PF00709 Adenylosuccinate synthetase KU217_12235 PF13393 Histidyl-tRNA synthetase KU217_12240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU217_12240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU217_12245 PF02272 DHHA1 domain KU217_12245 PF01411 tRNA synthetases class II (A) KU217_12245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU217_12250 PF00696 Amino acid kinase family KU217_12250 PF01842 ACT domain KU217_12250 PF13840 ACT domain KU217_12255 PF02599 Global regulator protein family KU217_12260 PF01351 Ribonuclease HII KU217_12270 PF01292 Prokaryotic cytochrome b561 KU217_12275 PF00962 Adenosine/AMP deaminase KU217_12280 PF00860 Permease family KU217_12290 PF00743 Flavin-binding monooxygenase-like KU217_12295 PF00106 short chain dehydrogenase KU217_12305 PF02678 Pirin KU217_12305 PF17954 Quercetinase C-terminal cupin domain KU217_12310 PF00440 Bacterial regulatory proteins, tetR family KU217_12310 PF17932 Tetracyclin repressor-like, C-terminal domain KU217_12320 PF00106 short chain dehydrogenase KU217_12325 PF00743 Flavin-binding monooxygenase-like KU217_12330 PF04072 Leucine carboxyl methyltransferase KU217_12335 PF12833 Helix-turn-helix domain KU217_12340 PF00743 Flavin-binding monooxygenase-like KU217_12345 PF00106 short chain dehydrogenase KU217_12350 PF07859 alpha/beta hydrolase fold KU217_12355 PF05199 GMC oxidoreductase KU217_12360 PF03573 outer membrane porin, OprD family KU217_12365 PF07690 Major Facilitator Superfamily KU217_12370 PF00884 Sulfatase KU217_12375 PF03781 Sulfatase-modifying factor enzyme 1 KU217_12385 PF00355 Rieske [2Fe-2S] domain KU217_12390 PF00175 Oxidoreductase NAD-binding domain KU217_12390 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_12405 PF07690 Major Facilitator Superfamily KU217_12410 PF00378 Enoyl-CoA hydratase/isomerase KU217_12415 PF00171 Aldehyde dehydrogenase family KU217_12425 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_12425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_12425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_12430 PF03573 outer membrane porin, OprD family KU217_12445 PF07519 Tannase and feruloyl esterase KU217_12450 PF07729 FCD domain KU217_12450 PF00392 Bacterial regulatory proteins, gntR family KU217_12455 PF00171 Aldehyde dehydrogenase family KU217_12460 PF00701 Dihydrodipicolinate synthetase family KU217_12465 PF13378 Enolase C-terminal domain-like KU217_12470 PF07690 Major Facilitator Superfamily KU217_12475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KU217_12475 PF08666 SAF domain KU217_12480 PF00892 EamA-like transporter family KU217_12485 PF12833 Helix-turn-helix domain KU217_12485 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU217_12490 PF00171 Aldehyde dehydrogenase family KU217_12515 PF00324 Amino acid permease KU217_12520 PF04958 Arginine N-succinyltransferase beta subunit KU217_12525 PF00202 Aminotransferase class-III KU217_12535 PF00171 Aldehyde dehydrogenase family KU217_12545 PF07729 FCD domain KU217_12545 PF00392 Bacterial regulatory proteins, gntR family KU217_12555 PF00324 Amino acid permease KU217_12560 PF01266 FAD dependent oxidoreductase KU217_12565 PF00324 Amino acid permease KU217_12595 PF05593 RHS Repeat KU217_12595 PF03527 RHS protein KU217_12600 PF13296 Putative type VI secretion system Rhs element Vgr KU217_12600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KU217_12600 PF04717 Type VI secretion system, phage-baseplate injector KU217_12615 PF03180 NLPA lipoprotein KU217_12620 PF05987 Bacterial protein of unknown function (DUF898) KU217_12635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_12635 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_12645 PF00764 Arginosuccinate synthase KU217_12650 PF00360 Phytochrome region KU217_12650 PF00990 Diguanylate cyclase, GGDEF domain KU217_12650 PF01590 GAF domain KU217_12650 PF00563 EAL domain KU217_12655 PF01979 Amidohydrolase family KU217_12660 PF00929 Exonuclease KU217_12670 PF00593 TonB dependent receptor KU217_12670 PF07715 TonB-dependent Receptor Plug Domain KU217_12675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU217_12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_12680 PF00005 ABC transporter KU217_12680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU217_12685 PF12911 N-terminal TM domain of oligopeptide transport permease C KU217_12685 PF00528 Binding-protein-dependent transport system inner membrane component KU217_12690 PF00528 Binding-protein-dependent transport system inner membrane component KU217_12695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KU217_12700 PF01464 Transglycosylase SLT domain KU217_12700 PF01476 LysM domain KU217_12700 PF01464 Transglycosylase SLT domain KU217_12700 PF01476 LysM domain KU217_12705 PF00929 Exonuclease KU217_12715 PF09297 NADH pyrophosphatase zinc ribbon domain KU217_12715 PF00293 NUDIX domain KU217_12725 PF04972 BON domain KU217_12730 PF02021 Uncharacterised protein family UPF0102 KU217_12735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU217_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_12745 PF03466 LysR substrate binding domain KU217_12750 PF01810 LysE type translocator KU217_12760 PF13411 MerR HTH family regulatory protein KU217_12770 PF01494 FAD binding domain KU217_12775 PF01494 FAD binding domain KU217_12780 PF00557 Metallopeptidase family M24 KU217_12780 PF05195 Aminopeptidase P, N-terminal domain KU217_12820 PF08019 Phosphoethanolamine transferase EptA/EptB KU217_12820 PF00884 Sulfatase KU217_12865 PF01476 LysM domain KU217_12865 PF08525 Opacity-associated protein A N-terminal motif KU217_12865 PF01551 Peptidase family M23 KU217_12880 PF03544 Gram-negative bacterial TonB protein C-terminal KU217_13170 PF01812 5-formyltetrahydrofolate cyclo-ligase family KU217_13175 PF04355 SmpA / OmlA family KU217_13175 PF00691 OmpA family KU217_13185 PF02190 ATP-dependent protease La (LON) substrate-binding domain KU217_13185 PF00004 ATPase family associated with various cellular activities (AAA) KU217_13185 PF05362 Lon protease (S16) C-terminal proteolytic domain KU217_13190 PF02590 Predicted SPOUT methyltransferase KU217_13195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KU217_13205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KU217_13205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KU217_13210 PF04060 Putative Fe-S cluster KU217_13215 PF10576 Iron-sulfur binding domain of endonuclease III KU217_13215 PF00633 Helix-hairpin-helix motif KU217_13215 PF00730 HhH-GPD superfamily base excision DNA repair protein KU217_13225 PF05191 Adenylate kinase, active site lid KU217_13240 PF03717 Penicillin-binding Protein dimerisation domain KU217_13240 PF00905 Penicillin binding protein transpeptidase domain KU217_13255 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU217_13260 PF01730 UreF KU217_13265 PF02814 UreE urease accessory protein, N-terminal domain KU217_13265 PF05194 UreE urease accessory protein, C-terminal domain KU217_13275 PF00547 Urease, gamma subunit KU217_13280 PF01774 UreD urease accessory protein KU217_13295 PF00463 Isocitrate lyase family KU217_13300 PF03466 LysR substrate binding domain KU217_13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_13305 PF01595 Cyclin M transmembrane N-terminal domain KU217_13305 PF03471 Transporter associated domain KU217_13305 PF00571 CBS domain KU217_13310 PF03600 Citrate transporter KU217_13325 PF00009 Elongation factor Tu GTP binding domain KU217_13330 PF01507 Phosphoadenosine phosphosulfate reductase family KU217_13340 PF14052 Capsule assembly protein Wzi KU217_13345 PF00152 tRNA synthetases class II (D, K and N) KU217_13345 PF01336 OB-fold nucleic acid binding domain KU217_13360 PF00301 Rubredoxin KU217_13365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_13365 PF18113 Rubredoxin binding C-terminal domain KU217_13370 PF00561 alpha/beta hydrolase fold KU217_13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_13375 PF03466 LysR substrate binding domain KU217_13385 PF17941 Polyphosphate kinase C-terminal domain 1 KU217_13385 PF13090 Polyphosphate kinase C-terminal domain 2 KU217_13385 PF02503 Polyphosphate kinase middle domain KU217_13385 PF13089 Polyphosphate kinase N-terminal domain KU217_13390 PF00912 Transglycosylase KU217_13395 PF01694 Rhomboid family KU217_13405 PF00005 ABC transporter KU217_13410 PF13472 GDSL-like Lipase/Acylhydrolase family KU217_13415 PF00484 Carbonic anhydrase KU217_13420 PF00561 alpha/beta hydrolase fold KU217_13430 PF07715 TonB-dependent Receptor Plug Domain KU217_13430 PF00593 TonB dependent receptor KU217_13435 PF01106 NifU-like domain KU217_13435 PF01521 Iron-sulphur cluster biosynthesis KU217_13445 PF00884 Sulfatase KU217_13450 PF03781 Sulfatase-modifying factor enzyme 1 KU217_13465 PF00291 Pyridoxal-phosphate dependent enzyme KU217_13470 PF01384 Phosphate transporter family KU217_13475 PF02574 Homocysteine S-methyltransferase KU217_13475 PF02965 Vitamin B12 dependent methionine synthase, activation domain KU217_13475 PF02607 B12 binding domain KU217_13475 PF00809 Pterin binding enzyme KU217_13475 PF02310 B12 binding domain KU217_13480 PF02779 Transketolase, pyrimidine binding domain KU217_13480 PF02780 Transketolase, C-terminal domain KU217_13485 PF00456 Transketolase, thiamine diphosphate binding domain KU217_13490 PF07690 Major Facilitator Superfamily KU217_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_13500 PF03466 LysR substrate binding domain KU217_13510 PF01263 Aldose 1-epimerase KU217_13515 PF07690 Major Facilitator Superfamily KU217_13520 PF02311 AraC-like ligand binding domain KU217_13520 PF12833 Helix-turn-helix domain KU217_13525 PF04960 Glutaminase KU217_13530 PF01327 Polypeptide deformylase KU217_13535 PF07690 Major Facilitator Superfamily KU217_13545 PF00205 Thiamine pyrophosphate enzyme, central domain KU217_13545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU217_13545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU217_13550 PF00171 Aldehyde dehydrogenase family KU217_13555 PF03447 Homoserine dehydrogenase, NAD binding domain KU217_13555 PF01958 Domain of unknown function DUF108 KU217_13565 PF12697 Alpha/beta hydrolase family KU217_13575 PF07690 Major Facilitator Superfamily KU217_13580 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_13580 PF14759 Reductase C-terminal KU217_13585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU217_13595 PF00355 Rieske [2Fe-2S] domain KU217_13605 PF00355 Rieske [2Fe-2S] domain KU217_13610 PF01614 Bacterial transcriptional regulator KU217_13610 PF09339 IclR helix-turn-helix domain KU217_13625 PF00378 Enoyl-CoA hydratase/isomerase KU217_13635 PF00535 Glycosyl transferase family 2 KU217_13640 PF14883 Hypothetical glycosyl hydrolase family 13 KU217_13640 PF01522 Polysaccharide deacetylase KU217_13645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_13650 PF07152 YaeQ protein KU217_13655 PF00375 Sodium:dicarboxylate symporter family KU217_13660 PF02492 CobW/HypB/UreG, nucleotide-binding domain KU217_13660 PF07683 Cobalamin synthesis protein cobW C-terminal domain KU217_13670 PF03061 Thioesterase superfamily KU217_13680 PF02028 BCCT, betaine/carnitine/choline family transporter KU217_13685 PF02028 BCCT, betaine/carnitine/choline family transporter KU217_13690 PF13977 BetI-type transcriptional repressor, C-terminal KU217_13690 PF00440 Bacterial regulatory proteins, tetR family KU217_13695 PF00171 Aldehyde dehydrogenase family KU217_13700 PF05199 GMC oxidoreductase KU217_13700 PF00732 GMC oxidoreductase KU217_13705 PF06039 Malate:quinone oxidoreductase (Mqo) KU217_13715 PF02574 Homocysteine S-methyltransferase KU217_13720 PF13520 Amino acid permease KU217_13745 PF01126 Heme oxygenase KU217_13755 PF04575 Protein of unknown function (DUF560) KU217_13765 PF07715 TonB-dependent Receptor Plug Domain KU217_13765 PF00593 TonB dependent receptor KU217_13775 PF04542 Sigma-70 region 2 KU217_13775 PF08281 Sigma-70, region 4 KU217_13785 PF00701 Dihydrodipicolinate synthetase family KU217_13790 PF00083 Sugar (and other) transporter KU217_13800 PF04851 Type III restriction enzyme, res subunit KU217_13800 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KU217_13800 PF00271 Helicase conserved C-terminal domain KU217_13800 PF08463 EcoEI R protein C-terminal KU217_13810 PF12161 HsdM N-terminal domain KU217_13810 PF02384 N-6 DNA Methylase KU217_13825 PF00271 Helicase conserved C-terminal domain KU217_13825 PF00176 SNF2 family N-terminal domain KU217_13875 PF10544 T5orf172 domain KU217_13880 PF13614 AAA domain KU217_13900 PF00905 Penicillin binding protein transpeptidase domain KU217_13975 PF00712 DNA polymerase III beta subunit, N-terminal domain KU217_13975 PF02767 DNA polymerase III beta subunit, central domain KU217_13975 PF02768 DNA polymerase III beta subunit, C-terminal domain KU217_14015 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KU217_14165 PF07007 Lysozyme inhibitor LprI KU217_14210 PF01695 IstB-like ATP binding protein KU217_14220 PF01555 DNA methylase KU217_14250 PF01555 DNA methylase KU217_14255 PF00145 C-5 cytosine-specific DNA methylase KU217_14325 PF00929 Exonuclease KU217_14365 PF07690 Major Facilitator Superfamily KU217_14370 PF13533 Biotin-lipoyl like KU217_14375 PF03061 Thioesterase superfamily KU217_14380 PF00490 Delta-aminolevulinic acid dehydratase KU217_14385 PF01266 FAD dependent oxidoreductase KU217_14390 PF08338 Domain of unknown function (DUF1731) KU217_14390 PF01370 NAD dependent epimerase/dehydratase family KU217_14410 PF00149 Calcineurin-like phosphoesterase KU217_14410 PF12320 Type 5 capsule protein repressor C-terminal domain KU217_14420 PF01168 Alanine racemase, N-terminal domain KU217_14425 PF00437 Type II/IV secretion system protein KU217_14430 PF00437 Type II/IV secretion system protein KU217_14435 PF01475 Ferric uptake regulator family KU217_14440 PF04355 SmpA / OmlA family KU217_14445 PF03658 RnfH family Ubiquitin KU217_14455 PF01814 Hemerythrin HHE cation binding domain KU217_14460 PF13230 Glutamine amidotransferases class-II KU217_14470 PF00696 Amino acid kinase family KU217_14475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU217_14475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU217_14475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU217_14475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU217_14480 PF00692 dUTPase KU217_14485 PF00580 UvrD/REP helicase N-terminal domain KU217_14485 PF13361 UvrD-like helicase C-terminal domain KU217_14490 PF13488 Glycine zipper KU217_14490 PF00691 OmpA family KU217_14495 PF01553 Acyltransferase KU217_14505 PF03775 Septum formation inhibitor MinC, C-terminal domain KU217_14510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KU217_14515 PF03776 Septum formation topological specificity factor MinE KU217_14525 PF01810 LysE type translocator KU217_14530 PF17854 FtsK alpha domain KU217_14530 PF09397 Ftsk gamma domain KU217_14530 PF01580 FtsK/SpoIIIE family KU217_14530 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KU217_14535 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_14540 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KU217_14545 PF04377 Arginine-tRNA-protein transferase, C terminus KU217_14545 PF04376 Arginine-tRNA-protein transferase, N terminus KU217_14550 PF00583 Acetyltransferase (GNAT) family KU217_14565 PF00009 Elongation factor Tu GTP binding domain KU217_14565 PF03144 Elongation factor Tu domain 2 KU217_14565 PF03143 Elongation factor Tu C-terminal domain KU217_14570 PF00679 Elongation factor G C-terminus KU217_14570 PF14492 Elongation Factor G, domain II KU217_14570 PF03764 Elongation factor G, domain IV KU217_14570 PF00009 Elongation factor Tu GTP binding domain KU217_14570 PF03144 Elongation factor Tu domain 2 KU217_14575 PF00177 Ribosomal protein S7p/S5e KU217_14580 PF00164 Ribosomal protein S12/S23 KU217_14590 PF00109 Beta-ketoacyl synthase, N-terminal domain KU217_14590 PF02801 Beta-ketoacyl synthase, C-terminal domain KU217_14595 PF03653 Uncharacterised protein family (UPF0093) KU217_14600 PF05726 Pirin C-terminal cupin domain KU217_14600 PF02678 Pirin KU217_14610 PF02540 NAD synthase KU217_14610 PF00795 Carbon-nitrogen hydrolase KU217_14625 PF00111 2Fe-2S iron-sulfur cluster binding domain KU217_14625 PF00175 Oxidoreductase NAD-binding domain KU217_14625 PF00970 Oxidoreductase FAD-binding domain KU217_14630 PF00171 Aldehyde dehydrogenase family KU217_14635 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KU217_14635 PF00355 Rieske [2Fe-2S] domain KU217_14640 PF07859 alpha/beta hydrolase fold KU217_14645 PF02028 BCCT, betaine/carnitine/choline family transporter KU217_14650 PF00180 Isocitrate/isopropylmalate dehydrogenase KU217_14655 PF03466 LysR substrate binding domain KU217_14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_14675 PF00037 4Fe-4S binding domain KU217_14680 PF01467 Cytidylyltransferase-like KU217_14685 PF01668 SmpB protein KU217_14690 PF03358 NADPH-dependent FMN reductase KU217_14695 PF02578 Multi-copper polyphenol oxidoreductase laccase KU217_14700 PF00849 RNA pseudouridylate synthase KU217_14700 PF01479 S4 domain KU217_14705 PF13525 Outer membrane lipoprotein KU217_14710 PF01807 CHC2 zinc finger KU217_14710 PF08275 DNA primase catalytic core, N-terminal domain KU217_14710 PF08278 DNA primase DnaG DnaB-binding KU217_14710 PF10410 DnaB-helicase binding domain of primase KU217_14715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KU217_14715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KU217_14715 PF01488 Shikimate / quinate 5-dehydrogenase KU217_14725 PF03550 Outer membrane lipoprotein LolB KU217_14730 PF00288 GHMP kinases N terminal domain KU217_14730 PF08544 GHMP kinases C terminal KU217_14755 PF14572 Phosphoribosyl synthetase-associated domain KU217_14755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU217_14760 PF01386 Ribosomal L25p family KU217_14765 PF01195 Peptidyl-tRNA hydrolase KU217_14770 PF02261 Aspartate decarboxylase KU217_14785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU217_14795 PF03070 TENA/THI-4/PQQC family KU217_14795 PF08543 Phosphomethylpyrimidine kinase KU217_14795 PF02581 Thiamine monophosphate synthase KU217_14800 PF04972 BON domain KU217_14800 PF01476 LysM domain KU217_14805 PF00550 Phosphopantetheine attachment site KU217_14815 PF00698 Acyl transferase domain KU217_14820 PF01783 Ribosomal L32p protein family KU217_14825 PF02620 Large ribosomal RNA subunit accumulation protein YceD KU217_14830 PF04315 Elongation factor P hydroxylase KU217_14835 PF01300 Telomere recombination KU217_14840 PF02616 Segregation and condensation protein ScpA KU217_14845 PF04079 Segregation and condensation complex subunit ScpB KU217_14850 PF00849 RNA pseudouridylate synthase KU217_14850 PF01479 S4 domain KU217_14865 PF00155 Aminotransferase class I and II KU217_14870 PF04055 Radical SAM superfamily KU217_14870 PF00202 Aminotransferase class-III KU217_14870 PF06968 Biotin and Thiamin Synthesis associated domain KU217_14875 PF08241 Methyltransferase domain KU217_14875 PF12697 Alpha/beta hydrolase family KU217_14880 PF02358 Trehalose-phosphatase KU217_14885 PF00982 Glycosyltransferase family 20 KU217_14890 PF07690 Major Facilitator Superfamily KU217_14895 PF00210 Ferritin-like domain KU217_14900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KU217_14900 PF01653 NAD-dependent DNA ligase adenylation domain KU217_14900 PF00533 BRCA1 C Terminus (BRCT) domain KU217_14900 PF12826 Helix-hairpin-helix motif KU217_14900 PF03120 NAD-dependent DNA ligase OB-fold domain KU217_14910 PF02463 RecF/RecN/SMC N terminal domain KU217_14910 PF06470 SMC proteins Flexible Hinge Domain KU217_14920 PF01925 Sulfite exporter TauE/SafE KU217_14930 PF03309 Type III pantothenate kinase KU217_14935 PF00448 SRP54-type protein, GTPase domain KU217_14935 PF02881 SRP54-type protein, helical bundle domain KU217_14935 PF02978 Signal peptide binding domain KU217_14945 PF01207 Dihydrouridine synthase (Dus) KU217_14975 PF00692 dUTPase KU217_14990 PF01048 Phosphorylase superfamily KU217_14995 PF10609 NUBPL iron-transfer P-loop NTPase KU217_15005 PF09334 tRNA synthetases class I (M) KU217_15005 PF01588 Putative tRNA binding domain KU217_15030 PF13533 Biotin-lipoyl like KU217_15035 PF00291 Pyridoxal-phosphate dependent enzyme KU217_15050 PF05552 Conserved TM helix KU217_15065 PF00175 Oxidoreductase NAD-binding domain KU217_15065 PF00970 Oxidoreductase FAD-binding domain KU217_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_15070 PF03466 LysR substrate binding domain KU217_15080 PF00313 'Cold-shock' DNA-binding domain KU217_15090 PF00361 Proton-conducting membrane transporter KU217_15095 PF00361 Proton-conducting membrane transporter KU217_15100 PF00361 Proton-conducting membrane transporter KU217_15100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU217_15105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU217_15110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KU217_15115 PF12838 4Fe-4S dicluster domain KU217_15120 PF00146 NADH dehydrogenase KU217_15125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KU217_15125 PF00384 Molybdopterin oxidoreductase KU217_15125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KU217_15130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KU217_15130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KU217_15130 PF10531 SLBB domain KU217_15140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KU217_15140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KU217_15145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KU217_15150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KU217_15155 PF00990 Diguanylate cyclase, GGDEF domain KU217_15155 PF17151 Periplasmic sensor domain KU217_15165 PF00512 His Kinase A (phospho-acceptor) domain KU217_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_15165 PF00672 HAMP domain KU217_15170 PF00072 Response regulator receiver domain KU217_15170 PF00486 Transcriptional regulatory protein, C terminal KU217_15180 PF03477 ATP cone domain KU217_15180 PF02867 Ribonucleotide reductase, barrel domain KU217_15180 PF00317 Ribonucleotide reductase, all-alpha domain KU217_15190 PF00268 Ribonucleotide reductase, small chain KU217_15195 PF00892 EamA-like transporter family KU217_15200 PF01557 Fumarylacetoacetate (FAA) hydrolase family KU217_15205 PF01613 Flavin reductase like domain KU217_15210 PF00296 Luciferase-like monooxygenase KU217_15215 PF00171 Aldehyde dehydrogenase family KU217_15220 PF09297 NADH pyrophosphatase zinc ribbon domain KU217_15220 PF00293 NUDIX domain KU217_15230 PF00083 Sugar (and other) transporter KU217_15245 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KU217_15270 PF17074 Darcynin, domain of unknown function KU217_15285 PF01613 Flavin reductase like domain KU217_15290 PF08267 Cobalamin-independent synthase, N-terminal domain KU217_15290 PF01717 Cobalamin-independent synthase, Catalytic domain KU217_15305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KU217_15305 PF12833 Helix-turn-helix domain KU217_15310 PF07687 Peptidase dimerisation domain KU217_15310 PF01546 Peptidase family M20/M25/M40 KU217_15320 PF03466 LysR substrate binding domain KU217_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_15325 PF07690 Major Facilitator Superfamily KU217_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_15335 PF03466 LysR substrate binding domain KU217_15340 PF14537 Cytochrome c3 KU217_15340 PF00890 FAD binding domain KU217_15350 PF02515 CoA-transferase family III KU217_15355 PF07690 Major Facilitator Superfamily KU217_15360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_15360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_15360 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_15365 PF03466 LysR substrate binding domain KU217_15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_15370 PF00107 Zinc-binding dehydrogenase KU217_15370 PF08240 Alcohol dehydrogenase GroES-like domain KU217_15375 PF00962 Adenosine/AMP deaminase KU217_15385 PF12167 Arm DNA-binding domain KU217_15385 PF00589 Phage integrase family KU217_15395 PF00436 Single-strand binding protein family KU217_15415 PF00005 ABC transporter KU217_15615 PF07927 HicA toxin of bacterial toxin-antitoxin, KU217_15620 PF01381 Helix-turn-helix KU217_15620 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KU217_15650 PF02445 Quinolinate synthetase A protein KU217_15655 PF01960 ArgJ family KU217_15660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU217_15660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU217_15665 PF00893 Small Multidrug Resistance protein KU217_15680 PF07731 Multicopper oxidase KU217_15680 PF07732 Multicopper oxidase KU217_15680 PF00394 Multicopper oxidase KU217_15695 PF00834 Ribulose-phosphate 3 epimerase family KU217_15705 PF00756 Putative esterase KU217_15715 PF04445 Putative SAM-dependent methyltransferase KU217_15720 PF00814 Glycoprotease family KU217_15725 PF00132 Bacterial transferase hexapeptide (six repeats) KU217_15730 PF00293 NUDIX domain KU217_15770 PF04715 Anthranilate synthase component I, N terminal region KU217_15770 PF00425 chorismate binding enzyme KU217_15775 PF00155 Aminotransferase class I and II KU217_15780 PF00815 Histidinol dehydrogenase KU217_15785 PF01634 ATP phosphoribosyltransferase KU217_15790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU217_15795 PF01722 BolA-like protein KU217_15800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KU217_15805 PF00309 Sigma-54 factor, Activator interacting domain (AID) KU217_15805 PF04963 Sigma-54 factor, core binding domain KU217_15805 PF04552 Sigma-54, DNA binding domain KU217_15850 PF00795 Carbon-nitrogen hydrolase KU217_15860 PF01047 MarR family KU217_15865 PF02566 OsmC-like protein KU217_15870 PF00437 Type II/IV secretion system protein KU217_15890 PF01367 5'-3' exonuclease, C-terminal SAM fold KU217_15890 PF00476 DNA polymerase family A KU217_15890 PF01612 3'-5' exonuclease KU217_15890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU217_15895 PF02325 YGGT family KU217_15900 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU217_15900 PF03807 NADP oxidoreductase coenzyme F420-dependent KU217_15905 PF11734 TilS substrate C-terminal domain KU217_15905 PF09179 TilS substrate binding domain KU217_15905 PF01171 PP-loop family KU217_15910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KU217_15915 PF02541 Ppx/GppA phosphatase family KU217_15920 PF00085 Thioredoxin KU217_15925 PF07498 Rho termination factor, N-terminal domain KU217_15925 PF07497 Rho termination factor, RNA-binding domain KU217_15925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU217_15940 PF00216 Bacterial DNA-binding protein KU217_15945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KU217_15945 PF01588 Putative tRNA binding domain KU217_15945 PF03484 tRNA synthetase B5 domain KU217_15945 PF03483 B3/4 domain KU217_15945 PF03147 Ferredoxin-fold anticodon binding domain KU217_15950 PF01409 tRNA synthetases class II core domain (F) KU217_15950 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KU217_15970 PF00453 Ribosomal protein L20 KU217_15975 PF01632 Ribosomal protein L35 KU217_15980 PF07690 Major Facilitator Superfamily KU217_15985 PF09335 SNARE associated Golgi protein KU217_15990 PF00043 Glutathione S-transferase, C-terminal domain KU217_15990 PF02798 Glutathione S-transferase, N-terminal domain KU217_15995 PF05198 Translation initiation factor IF-3, N-terminal domain KU217_15995 PF00707 Translation initiation factor IF-3, C-terminal domain KU217_16000 PF03129 Anticodon binding domain KU217_16000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU217_16000 PF02824 TGS domain KU217_16000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU217_16005 PF00501 AMP-binding enzyme KU217_16005 PF13193 AMP-binding enzyme C-terminal domain KU217_16010 PF04751 Protein of unknown function (DUF615) KU217_16015 PF00381 PTS HPr component phosphorylation site KU217_16020 PF03668 P-loop ATPase protein family KU217_16025 PF02569 Pantoate-beta-alanine ligase KU217_16030 PF02548 Ketopantoate hydroxymethyltransferase KU217_16035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KU217_16040 PF12627 Probable RNA and SrmB- binding site of polymerase A KU217_16040 PF12626 Polymerase A arginine-rich C-terminus KU217_16040 PF01743 Poly A polymerase head domain KU217_16050 PF03819 MazG nucleotide pyrophosphohydrolase domain KU217_16060 PF13291 ACT domain KU217_16060 PF04607 Region found in RelA / SpoT proteins KU217_16060 PF02824 TGS domain KU217_16065 PF05958 tRNA (Uracil-5-)-methyltransferase KU217_16075 PF00291 Pyridoxal-phosphate dependent enzyme KU217_16080 PF00672 HAMP domain KU217_16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_16080 PF00512 His Kinase A (phospho-acceptor) domain KU217_16080 PF01627 Hpt domain KU217_16080 PF00072 Response regulator receiver domain KU217_16080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KU217_16085 PF00378 Enoyl-CoA hydratase/isomerase KU217_16090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU217_16090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU217_16095 PF01261 Xylose isomerase-like TIM barrel KU217_16105 PF00106 short chain dehydrogenase KU217_16110 PF02233 NAD(P) transhydrogenase beta subunit KU217_16115 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KU217_16120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KU217_16120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KU217_16125 PF00892 EamA-like transporter family KU217_16135 PF07690 Major Facilitator Superfamily KU217_16140 PF01207 Dihydrouridine synthase (Dus) KU217_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_16150 PF03466 LysR substrate binding domain KU217_16160 PF00899 ThiF family KU217_16165 PF00330 Aconitase family (aconitate hydratase) KU217_16165 PF00694 Aconitase C-terminal domain KU217_16170 PF01026 TatD related DNase KU217_16185 PF00009 Elongation factor Tu GTP binding domain KU217_16185 PF03144 Elongation factor Tu domain 2 KU217_16185 PF16658 Class II release factor RF3, C-terminal domain KU217_16220 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KU217_16220 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KU217_16225 PF10369 Small subunit of acetolactate synthase KU217_16230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KU217_16230 PF00205 Thiamine pyrophosphate enzyme, central domain KU217_16230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KU217_16240 PF00133 tRNA synthetases class I (I, L, M and V) KU217_16240 PF09334 tRNA synthetases class I (M) KU217_16240 PF13603 Leucyl-tRNA synthetase, Domain 2 KU217_16240 PF08264 Anticodon-binding domain of tRNA KU217_16255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU217_16260 PF00005 ABC transporter KU217_16260 PF02687 FtsX-like permease family KU217_16260 PF12704 MacB-like periplasmic core domain KU217_16265 PF02321 Outer membrane efflux protein KU217_16280 PF00929 Exonuclease KU217_16285 PF03193 RsgA GTPase KU217_16295 PF00462 Glutaredoxin KU217_16300 PF02556 Preprotein translocase subunit SecB KU217_16310 PF01926 50S ribosome-binding GTPase KU217_16310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KU217_16315 PF13360 PQQ-like domain KU217_16325 PF13393 Histidyl-tRNA synthetase KU217_16325 PF03129 Anticodon binding domain KU217_16330 PF04551 GcpE protein KU217_16335 PF13464 Domain of unknown function (DUF4115) KU217_16345 PF04055 Radical SAM superfamily KU217_16350 PF00334 Nucleoside diphosphate kinase KU217_16355 PF04384 Iron-sulphur cluster assembly KU217_16360 PF01569 PAP2 superfamily KU217_16365 PF13439 Glycosyltransferase Family 4 KU217_16365 PF00534 Glycosyl transferases group 1 KU217_16370 PF11818 C-terminal domain of tail specific protease (DUF3340) KU217_16370 PF00595 PDZ domain KU217_16370 PF03572 Peptidase family S41 KU217_16370 PF17804 Tail specific protease N-terminal domain KU217_16375 PF00933 Glycosyl hydrolase family 3 N terminal domain KU217_16385 PF00561 alpha/beta hydrolase fold KU217_16390 PF00171 Aldehyde dehydrogenase family KU217_16395 PF00171 Aldehyde dehydrogenase family KU217_16400 PF01202 Shikimate kinase KU217_16405 PF02447 GntP family permease KU217_16410 PF01081 KDPG and KHG aldolase KU217_16415 PF00920 Dehydratase family KU217_16420 PF00871 Acetokinase family KU217_16425 PF07085 DRTGG domain KU217_16425 PF01515 Phosphate acetyl/butaryl transferase KU217_16430 PF05681 Fumarate hydratase (Fumerase) KU217_16430 PF05683 Fumarase C-terminus KU217_16445 PF10431 C-terminal, D2-small domain, of ClpB protein KU217_16445 PF06689 ClpX C4-type zinc finger KU217_16445 PF07724 AAA domain (Cdc48 subfamily) KU217_16450 PF00574 Clp protease KU217_16455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_16455 PF05698 Bacterial trigger factor protein (TF) C-terminus KU217_16455 PF05697 Bacterial trigger factor protein (TF) KU217_16460 PF00593 TonB dependent receptor KU217_16460 PF07715 TonB-dependent Receptor Plug Domain KU217_16465 PF13640 2OG-Fe(II) oxygenase superfamily KU217_16465 PF18331 PKHD-type hydroxylase C-terminal domain KU217_16470 PF00682 HMGL-like KU217_16470 PF08502 LeuA allosteric (dimerisation) domain KU217_16475 PF00561 alpha/beta hydrolase fold KU217_16480 PF07021 Methionine biosynthesis protein MetW KU217_16480 PF00561 alpha/beta hydrolase fold KU217_16490 PF01725 Ham1 family KU217_16500 PF02416 mttA/Hcf106 family KU217_16505 PF02416 mttA/Hcf106 family KU217_16510 PF00902 Sec-independent protein translocase protein (TatC) KU217_16530 PF01790 Prolipoprotein diacylglyceryl transferase KU217_16545 PF00303 Thymidylate synthase KU217_16550 PF00186 Dihydrofolate reductase KU217_16560 PF01625 Peptide methionine sulfoxide reductase KU217_16570 PF01618 MotA/TolQ/ExbB proton channel family KU217_16580 PF01842 ACT domain KU217_16580 PF00551 Formyl transferase KU217_16590 PF00171 Aldehyde dehydrogenase family KU217_16595 PF00830 Ribosomal L28 family KU217_16600 PF00471 Ribosomal protein L33 KU217_16605 PF00999 Sodium/hydrogen exchanger family KU217_16605 PF02254 TrkA-N domain KU217_16625 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KU217_16630 PF00580 UvrD/REP helicase N-terminal domain KU217_16630 PF13361 UvrD-like helicase C-terminal domain KU217_16645 PF01396 Topoisomerase DNA binding C4 zinc finger KU217_16645 PF08272 Topoisomerase I zinc-ribbon-like KU217_16645 PF01131 DNA topoisomerase KU217_16645 PF01751 Toprim domain KU217_16655 PF01638 HxlR-like helix-turn-helix KU217_16660 PF08240 Alcohol dehydrogenase GroES-like domain KU217_16660 PF00107 Zinc-binding dehydrogenase KU217_16665 PF04102 SlyX KU217_16670 PF00005 ABC transporter KU217_16670 PF16326 ABC transporter C-terminal domain KU217_16670 PF12848 ABC transporter KU217_16675 PF01810 LysE type translocator KU217_16680 PF03279 Bacterial lipid A biosynthesis acyltransferase KU217_16690 PF00375 Sodium:dicarboxylate symporter family KU217_16700 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU217_16700 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU217_16720 PF01416 tRNA pseudouridine synthase KU217_16730 PF01176 Translation initiation factor 1A / IF-1 KU217_16745 PF00180 Isocitrate/isopropylmalate dehydrogenase KU217_16755 PF00694 Aconitase C-terminal domain KU217_16760 PF00330 Aconitase family (aconitate hydratase) KU217_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_16770 PF03466 LysR substrate binding domain KU217_16790 PF00293 NUDIX domain KU217_16795 PF00391 PEP-utilising enzyme, mobile domain KU217_16795 PF01590 GAF domain KU217_16795 PF05524 PEP-utilising enzyme, N-terminal KU217_16795 PF02896 PEP-utilising enzyme, TIM barrel domain KU217_16800 PF00141 Peroxidase KU217_16805 PF12706 Beta-lactamase superfamily domain KU217_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_16810 PF03466 LysR substrate binding domain KU217_16820 PF02798 Glutathione S-transferase, N-terminal domain KU217_16825 PF13280 WYL domain KU217_16825 PF08279 HTH domain KU217_16830 PF13419 Haloacid dehalogenase-like hydrolase KU217_16835 PF01479 S4 domain KU217_16835 PF00849 RNA pseudouridylate synthase KU217_16840 PF12111 Polyribonucleotide phosphorylase C terminal KU217_16840 PF10150 Ribonuclease E/G family KU217_16840 PF00575 S1 RNA binding domain KU217_16845 PF00501 AMP-binding enzyme KU217_16845 PF13193 AMP-binding enzyme C-terminal domain KU217_16860 PF03466 LysR substrate binding domain KU217_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU217_16865 PF00106 short chain dehydrogenase KU217_16870 PF04055 Radical SAM superfamily KU217_16870 PF06969 HemN C-terminal domain KU217_16880 PF01554 MatE KU217_16885 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_16885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_16885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU217_16890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_16890 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KU217_16895 PF03109 ABC1 family KU217_16900 PF01197 Ribosomal protein L31 KU217_16910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KU217_16920 PF13247 4Fe-4S dicluster domain KU217_16920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KU217_16920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU217_16930 PF03884 DNA gyrase inhibitor YacG KU217_16935 PF00753 Metallo-beta-lactamase superfamily KU217_16940 PF00762 Ferrochelatase KU217_16950 PF01177 Asp/Glu/Hydantoin racemase KU217_16970 PF01206 Sulfurtransferase TusA KU217_16975 PF00571 CBS domain KU217_16975 PF03471 Transporter associated domain KU217_16980 PF00795 Carbon-nitrogen hydrolase KU217_16985 PF01588 Putative tRNA binding domain KU217_16995 PF07963 Prokaryotic N-terminal methylation motif KU217_16995 PF08334 Type II secretion system (T2SS), protein G KU217_17000 PF00482 Type II secretion system (T2SS), protein F KU217_17005 PF00270 DEAD/DEAH box helicase KU217_17005 PF00271 Helicase conserved C-terminal domain KU217_17005 PF17764 3′ DNA-binding domain (3′BD) KU217_17005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KU217_17005 PF18074 Primosomal protein N C-terminal domain KU217_17010 PF00999 Sodium/hydrogen exchanger family KU217_17010 PF02254 TrkA-N domain KU217_17015 PF01430 Hsp33 protein KU217_17025 PF01556 DnaJ C terminal domain KU217_17025 PF00226 DnaJ domain KU217_17035 PF01544 CorA-like Mg2+ transporter protein KU217_17040 PF00575 S1 RNA binding domain KU217_17040 PF00013 KH domain KU217_17040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KU217_17040 PF03725 3' exoribonuclease family, domain 2 KU217_17040 PF01138 3' exoribonuclease family, domain 1 KU217_17045 PF00312 Ribosomal protein S15 KU217_17050 PF00144 Beta-lactamase KU217_17055 PF13538 UvrD-like helicase C-terminal domain KU217_17060 PF12705 PD-(D/E)XK nuclease superfamily KU217_17060 PF00580 UvrD/REP helicase N-terminal domain KU217_17060 PF13361 UvrD-like helicase C-terminal domain KU217_17065 PF17946 RecC C-terminal domain KU217_17075 PF03976 Polyphosphate kinase 2 (PPK2) KU217_17085 PF01209 ubiE/COQ5 methyltransferase family KU217_17095 PF03109 ABC1 family KU217_17100 PF01494 FAD binding domain KU217_17105 PF01502 Phosphoribosyl-AMP cyclohydrolase KU217_17120 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KU217_17120 PF00361 Proton-conducting membrane transporter KU217_17120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU217_17120 PF13244 Domain of unknown function (DUF4040) KU217_17125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU217_17130 PF00361 Proton-conducting membrane transporter KU217_17135 PF01899 Na+/H+ ion antiporter subunit KU217_17140 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KU217_17145 PF03334 Na+/H+ antiporter subunit KU217_17150 PF02033 Ribosome-binding factor A KU217_17155 PF00009 Elongation factor Tu GTP binding domain KU217_17155 PF11987 Translation-initiation factor 2 KU217_17155 PF08364 Bacterial translation initiation factor IF-2 associated region KU217_17155 PF04760 Translation initiation factor IF-2, N-terminal region KU217_17160 PF13184 NusA-like KH domain KU217_17160 PF08529 NusA N-terminal domain KU217_17160 PF00575 S1 RNA binding domain KU217_17165 PF02576 RimP N-terminal domain KU217_17165 PF17384 RimP C-terminal SH3 domain KU217_17185 PF03840 Preprotein translocase SecG subunit KU217_17190 PF00121 Triosephosphate isomerase KU217_17195 PF00437 Type II/IV secretion system protein KU217_17195 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU217_17200 PF00482 Type II secretion system (T2SS), protein F KU217_17205 PF06750 Bacterial Peptidase A24 N-terminal domain KU217_17205 PF01478 Type IV leader peptidase family KU217_17210 PF01121 Dephospho-CoA kinase KU217_17220 PF00588 SpoU rRNA Methylase family KU217_17220 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU217_17225 PF06865 Pyrimidine/purine nucleoside phosphorylase KU217_17235 PF02463 RecF/RecN/SMC N terminal domain KU217_17240 PF02622 Uncharacterized ACR, COG1678 KU217_17245 PF03652 Holliday junction resolvase KU217_17250 PF13533 Biotin-lipoyl like KU217_17275 PF02805 Metal binding domain of Ada KU217_17275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU217_17275 PF12833 Helix-turn-helix domain KU217_17275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU217_17280 PF01066 CDP-alcohol phosphatidyltransferase KU217_17290 PF01541 GIY-YIG catalytic domain KU217_17290 PF02151 UvrB/uvrC motif KU217_17290 PF08459 UvrC Helix-hairpin-helix N-terminal KU217_17305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU217_17305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU217_17305 PF00378 Enoyl-CoA hydratase/isomerase KU217_17310 PF02803 Thiolase, C-terminal domain KU217_17310 PF00108 Thiolase, N-terminal domain KU217_17325 PF00376 MerR family regulatory protein KU217_17325 PF09278 MerR, DNA binding KU217_17335 PF01323 DSBA-like thioredoxin domain KU217_17350 PF00183 Hsp90 protein KU217_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_17365 PF13726 Na+-H+ antiporter family KU217_17365 PF03553 Na+/H+ antiporter family KU217_17370 PF00561 alpha/beta hydrolase fold KU217_17390 PF04983 RNA polymerase Rpb1, domain 3 KU217_17390 PF04998 RNA polymerase Rpb1, domain 5 KU217_17390 PF00623 RNA polymerase Rpb1, domain 2 KU217_17390 PF05000 RNA polymerase Rpb1, domain 4 KU217_17390 PF04997 RNA polymerase Rpb1, domain 1 KU217_17395 PF04563 RNA polymerase beta subunit KU217_17395 PF10385 RNA polymerase beta subunit external 1 domain KU217_17395 PF00562 RNA polymerase Rpb2, domain 6 KU217_17395 PF04560 RNA polymerase Rpb2, domain 7 KU217_17395 PF04561 RNA polymerase Rpb2, domain 2 KU217_17395 PF04565 RNA polymerase Rpb2, domain 3 KU217_17400 PF00542 Ribosomal protein L7/L12 C-terminal domain KU217_17400 PF16320 Ribosomal protein L7/L12 dimerisation domain KU217_17405 PF00466 Ribosomal protein L10 KU217_17410 PF00687 Ribosomal protein L1p/L10e family KU217_17415 PF03946 Ribosomal protein L11, N-terminal domain KU217_17415 PF00298 Ribosomal protein L11, RNA binding domain KU217_17420 PF00467 KOW motif KU217_17420 PF02357 Transcription termination factor nusG KU217_17425 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KU217_17435 PF03143 Elongation factor Tu C-terminal domain KU217_17435 PF03144 Elongation factor Tu domain 2 KU217_17435 PF00009 Elongation factor Tu GTP binding domain KU217_17460 PF00425 chorismate binding enzyme KU217_17460 PF04715 Anthranilate synthase component I, N terminal region KU217_17465 PF13419 Haloacid dehalogenase-like hydrolase KU217_17470 PF12401 Protein of unknown function (DUF2662) KU217_17470 PF00498 FHA domain KU217_17475 PF00263 Bacterial type II and III secretion system protein KU217_17475 PF03958 Bacterial type II/III secretion system short domain KU217_17490 PF00816 H-NS histone family KU217_17515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KU217_17515 PF03900 Porphobilinogen deaminase, C-terminal domain KU217_17520 PF00072 Response regulator receiver domain KU217_17520 PF04397 LytTr DNA-binding domain KU217_17525 PF06580 Histidine kinase KU217_17525 PF07694 5TMR of 5TMR-LYT KU217_17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_17530 PF14698 Argininosuccinate lyase C-terminal KU217_17530 PF00206 Lyase KU217_17535 PF04362 Bacterial Fe(2+) trafficking KU217_17540 PF01895 PhoU domain KU217_17545 PF02321 Outer membrane efflux protein KU217_17550 PF00892 EamA-like transporter family KU217_17565 PF13667 ThiC-associated domain KU217_17565 PF01964 Radical SAM ThiC family KU217_17570 PF00293 NUDIX domain KU217_17575 PF00149 Calcineurin-like phosphoesterase KU217_17580 PF01258 Prokaryotic dksA/traR C4-type zinc finger KU217_17585 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU217_17590 PF01098 Cell cycle protein KU217_17595 PF02875 Mur ligase family, glutamate ligase domain KU217_17595 PF08245 Mur ligase middle domain KU217_17605 PF07664 Ferrous iron transport protein B C terminus KU217_17605 PF02421 Ferrous iron transport protein B KU217_17605 PF07670 Nucleoside recognition KU217_17615 PF02899 Phage integrase, N-terminal SAM-like domain KU217_17615 PF00589 Phage integrase family KU217_17620 PF10411 Disulfide bond isomerase protein N-terminus KU217_17620 PF13098 Thioredoxin-like domain KU217_17625 PF01842 ACT domain KU217_17625 PF00742 Homoserine dehydrogenase KU217_17625 PF03447 Homoserine dehydrogenase, NAD binding domain KU217_17630 PF00291 Pyridoxal-phosphate dependent enzyme KU217_17635 PF00768 D-alanyl-D-alanine carboxypeptidase KU217_17640 PF00196 Bacterial regulatory proteins, luxR family KU217_17640 PF00072 Response regulator receiver domain KU217_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU217_17645 PF00512 His Kinase A (phospho-acceptor) domain KU217_17650 PF02954 Bacterial regulatory protein, Fis family KU217_17650 PF00072 Response regulator receiver domain KU217_17650 PF00158 Sigma-54 interaction domain KU217_17655 PF03572 Peptidase family S41 KU217_17655 PF00595 PDZ domain KU217_17660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KU217_17660 PF01676 Metalloenzyme superfamily KU217_17665 PF03739 Lipopolysaccharide export system permease LptF/LptG KU217_17675 PF00883 Cytosol aminopeptidase family, catalytic domain KU217_17675 PF02789 Cytosol aminopeptidase family, N-terminal domain KU217_17695 PF00677 Lumazine binding domain KU217_17705 PF01872 RibD C-terminal domain KU217_17705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU217_17710 PF03477 ATP cone domain KU217_17715 PF00909 Ammonium Transporter Family KU217_17720 PF00543 Nitrogen regulatory protein P-II KU217_17730 PF01078 Magnesium chelatase, subunit ChlI KU217_17730 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU217_17735 PF00155 Aminotransferase class I and II KU217_17735 PF00392 Bacterial regulatory proteins, gntR family KU217_17745 PF00701 Dihydrodipicolinate synthetase family KU217_17755 PF03573 outer membrane porin, OprD family KU217_17760 PF00719 Inorganic pyrophosphatase KU217_17775 PF00501 AMP-binding enzyme KU217_17775 PF13193 AMP-binding enzyme C-terminal domain KU217_17780 PF03989 DNA gyrase C-terminal domain, beta-propeller KU217_17780 PF00521 DNA gyrase/topoisomerase IV, subunit A KU217_17785 PF07690 Major Facilitator Superfamily KU217_17790 PF03458 UPF0126 domain KU217_17795 PF02810 SEC-C motif KU217_17800 PF03741 Integral membrane protein TerC family KU217_17800 PF03471 Transporter associated domain KU217_17805 PF03641 Possible lysine decarboxylase KU217_17810 PF07690 Major Facilitator Superfamily KU217_17820 PF00817 impB/mucB/samB family KU217_17820 PF11799 impB/mucB/samB family C-terminal domain KU217_17820 PF11798 IMS family HHH motif KU217_17835 PF11842 Domain of unknown function (DUF3362) KU217_17835 PF04055 Radical SAM superfamily KU217_17835 PF08497 Radical SAM N-terminal KU217_17855 PF03358 NADPH-dependent FMN reductase KU217_17865 PF00291 Pyridoxal-phosphate dependent enzyme KU217_17900 PF00440 Bacterial regulatory proteins, tetR family KU217_17925 PF01327 Polypeptide deformylase KU217_17935 PF17782 DprA winged helix domain KU217_17935 PF02481 DNA recombination-mediator protein A KU217_17940 PF01300 Telomere recombination KU217_17945 PF00892 EamA-like transporter family KU217_17950 PF00440 Bacterial regulatory proteins, tetR family KU217_17955 PF07690 Major Facilitator Superfamily KU217_17965 PF00255 Glutathione peroxidase KU217_17975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KU217_17980 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU217_17980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU217_17985 PF00231 ATP synthase KU217_17990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU217_17990 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU217_17990 PF00306 ATP synthase alpha/beta chain, C terminal domain KU217_17995 PF00213 ATP synthase delta (OSCP) subunit KU217_18000 PF00430 ATP synthase B/B' CF(0) KU217_18005 PF00137 ATP synthase subunit C KU217_18010 PF00119 ATP synthase A chain KU217_18030 PF00005 ABC transporter KU217_18035 PF00950 ABC 3 transport family KU217_18040 PF01810 LysE type translocator KU217_18045 PF04261 Dyp-type peroxidase family KU217_18050 PF00390 Malic enzyme, N-terminal domain KU217_18050 PF03949 Malic enzyme, NAD binding domain KU217_18055 PF03485 Arginyl tRNA synthetase N terminal domain KU217_18055 PF00750 tRNA synthetases class I (R) KU217_18055 PF05746 DALR anticodon binding domain KU217_18075 PF02678 Pirin KU217_18075 PF05726 Pirin C-terminal cupin domain KU217_18085 PF03551 Transcriptional regulator PadR-like family KU217_18090 PF13427 Domain of unknown function (DUF4111) KU217_18090 PF01909 Nucleotidyltransferase domain KU217_18095 PF00117 Glutamine amidotransferase class-I KU217_18095 PF00958 GMP synthase C terminal domain KU217_18095 PF02540 NAD synthase KU217_18100 PF04286 Protein of unknown function (DUF445) KU217_18105 PF07681 DoxX KU217_18110 PF09335 SNARE associated Golgi protein KU217_18125 PF13614 AAA domain KU217_18135 PF01722 BolA-like protein KU217_18150 PF01648 4'-phosphopantetheinyl transferase superfamily KU217_18155 PF12697 Alpha/beta hydrolase family KU217_18170 PF00501 AMP-binding enzyme KU217_18170 PF13193 AMP-binding enzyme C-terminal domain KU217_18170 PF00975 Thioesterase domain KU217_18170 PF00550 Phosphopantetheine attachment site KU217_18170 PF00668 Condensation domain KU217_18175 PF00109 Beta-ketoacyl synthase, N-terminal domain KU217_18175 PF00975 Thioesterase domain KU217_18175 PF14765 Polyketide synthase dehydratase KU217_18175 PF00550 Phosphopantetheine attachment site KU217_18175 PF08242 Methyltransferase domain KU217_18175 PF02801 Beta-ketoacyl synthase, C-terminal domain KU217_18175 PF16197 Ketoacyl-synthetase C-terminal extension KU217_18180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_18180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_18180 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_18185 PF00501 AMP-binding enzyme KU217_18190 PF03472 Autoinducer binding domain KU217_18190 PF00196 Bacterial regulatory proteins, luxR family KU217_18200 PF00765 Autoinducer synthase KU217_18205 PF00083 Sugar (and other) transporter KU217_18205 PF07690 Major Facilitator Superfamily KU217_18210 PF00378 Enoyl-CoA hydratase/isomerase KU217_18215 PF00378 Enoyl-CoA hydratase/isomerase KU217_18220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU217_18220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU217_18220 PF02770 Acyl-CoA dehydrogenase, middle domain KU217_18225 PF13193 AMP-binding enzyme C-terminal domain KU217_18225 PF00501 AMP-binding enzyme KU217_18230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KU217_18230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KU217_18235 PF00171 Aldehyde dehydrogenase family KU217_18245 PF00324 Amino acid permease KU217_18250 PF00324 Amino acid permease KU217_18255 PF01042 Endoribonuclease L-PSP KU217_18260 PF00842 Alanine racemase, C-terminal domain KU217_18260 PF01168 Alanine racemase, N-terminal domain KU217_18265 PF01266 FAD dependent oxidoreductase KU217_18270 PF01037 Lrp/AsnC ligand binding domain KU217_18280 PF00593 TonB dependent receptor KU217_18280 PF07715 TonB-dependent Receptor Plug Domain KU217_18295 PF00849 RNA pseudouridylate synthase KU217_18310 PF00440 Bacterial regulatory proteins, tetR family KU217_18310 PF08361 MAATS-type transcriptional repressor, C-terminal region KU217_18320 PF00109 Beta-ketoacyl synthase, N-terminal domain KU217_18320 PF02801 Beta-ketoacyl synthase, C-terminal domain KU217_18355 PF00694 Aconitase C-terminal domain KU217_18355 PF00330 Aconitase family (aconitate hydratase) KU217_18360 PF00285 Citrate synthase, C-terminal domain KU217_18370 PF00392 Bacterial regulatory proteins, gntR family KU217_18370 PF07729 FCD domain KU217_18380 PF00155 Aminotransferase class I and II KU217_18385 PF09330 D-lactate dehydrogenase, membrane binding KU217_18385 PF01565 FAD binding domain KU217_18390 PF01070 FMN-dependent dehydrogenase KU217_18395 PF07729 FCD domain KU217_18395 PF00392 Bacterial regulatory proteins, gntR family KU217_18400 PF02652 L-lactate permease KU217_18405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU217_18405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU217_18405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU217_18405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU217_18410 PF16363 GDP-mannose 4,6 dehydratase KU217_18415 PF00342 Phosphoglucose isomerase KU217_18420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU217_18420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU217_18420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU217_18425 PF00483 Nucleotidyl transferase KU217_18430 PF02397 Bacterial sugar transferase KU217_18450 PF07922 Glycosyltransferase family 52 KU217_18455 PF01943 Polysaccharide biosynthesis protein KU217_18460 PF02348 Cytidylyltransferase KU217_18465 PF00483 Nucleotidyl transferase KU217_18475 PF08666 SAF domain KU217_18475 PF03102 NeuB family KU217_18480 PF02350 UDP-N-acetylglucosamine 2-epimerase KU217_18485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU217_18490 PF02719 Polysaccharide biosynthesis protein KU217_18495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU217_18495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU217_18495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU217_18500 PF02563 Polysaccharide biosynthesis/export protein KU217_18500 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KU217_18500 PF10531 SLBB domain KU217_18505 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU217_18510 PF02706 Chain length determinant protein KU217_18510 PF13807 G-rich domain on putative tyrosine kinase KU217_18510 PF13614 AAA domain KU217_18515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU217_18515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_18520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU217_18520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_18525 PF03023 Lipid II flippase MurJ KU217_18530 PF01510 N-acetylmuramoyl-L-alanine amidase KU217_18535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KU217_18535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KU217_18545 PF05506 Domain of unknown function (DUF756) KU217_18545 PF04185 Phosphoesterase family KU217_18555 PF03725 3' exoribonuclease family, domain 2 KU217_18555 PF01138 3' exoribonuclease family, domain 1 KU217_18560 PF00487 Fatty acid desaturase KU217_18565 PF00175 Oxidoreductase NAD-binding domain KU217_18570 PF00440 Bacterial regulatory proteins, tetR family KU217_18575 PF00440 Bacterial regulatory proteins, tetR family KU217_18575 PF08360 QacR-like protein, C-terminal region KU217_18580 PF01323 DSBA-like thioredoxin domain KU217_18590 PF13419 Haloacid dehalogenase-like hydrolase KU217_18595 PF00106 short chain dehydrogenase KU217_18610 PF00696 Amino acid kinase family KU217_18610 PF00583 Acetyltransferase (GNAT) family KU217_18615 PF09084 NMT1/THI5 like KU217_18620 PF09084 NMT1/THI5 like KU217_18625 PF00296 Luciferase-like monooxygenase KU217_18630 PF00528 Binding-protein-dependent transport system inner membrane component KU217_18635 PF00005 ABC transporter KU217_18640 PF00440 Bacterial regulatory proteins, tetR family KU217_18640 PF08362 YcdC-like protein, C-terminal region KU217_18645 PF01048 Phosphorylase superfamily KU217_18655 PF06574 FAD synthetase KU217_18655 PF01687 Riboflavin kinase KU217_18660 PF08264 Anticodon-binding domain of tRNA KU217_18660 PF00133 tRNA synthetases class I (I, L, M and V) KU217_18660 PF06827 Zinc finger found in FPG and IleRS KU217_18665 PF01252 Signal peptidase (SPase) II KU217_18670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU217_18710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU217_18715 PF07859 alpha/beta hydrolase fold KU217_18740 PF01025 GrpE KU217_18745 PF00012 Hsp70 protein KU217_18765 PF13406 Transglycosylase SLT domain KU217_18770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KU217_18770 PF02222 ATP-grasp domain KU217_18775 PF00731 AIR carboxylase KU217_18785 PF08245 Mur ligase middle domain KU217_18785 PF01225 Mur ligase family, catalytic domain KU217_18785 PF02875 Mur ligase family, glutamate ligase domain KU217_18795 PF01569 PAP2 superfamily KU217_18800 PF03741 Integral membrane protein TerC family KU217_18810 PF03738 Glutathionylspermidine synthase preATP-grasp KU217_18815 PF00355 Rieske [2Fe-2S] domain KU217_18820 PF01979 Amidohydrolase family KU217_18825 PF00156 Phosphoribosyl transferase domain KU217_18835 PF10411 Disulfide bond isomerase protein N-terminus KU217_18835 PF13098 Thioredoxin-like domain KU217_18840 PF01545 Cation efflux family KU217_18840 PF16916 Dimerisation domain of Zinc Transporter KU217_18845 PF02583 Metal-sensitive transcriptional repressor KU217_18850 PF01926 50S ribosome-binding GTPase KU217_18850 PF12631 MnmE helical domain KU217_18850 PF10396 GTP-binding protein TrmE N-terminus KU217_18855 PF02096 60Kd inner membrane protein KU217_18855 PF14849 YidC periplasmic domain KU217_18860 PF01809 Putative membrane protein insertion efficiency factor KU217_18865 PF00825 Ribonuclease P KU217_18870 PF00468 Ribosomal protein L34 KU217_18925 PF00565 Staphylococcal nuclease homologue KU217_18930 PF00816 H-NS histone family KU217_18990 PF13614 AAA domain KU217_18995 PF17762 HTH domain found in ParB protein KU217_18995 PF02195 ParB-like nuclease domain KU217_19010 PF05816 Toxic anion resistance protein (TelA) KU217_19115 PF00226 DnaJ domain KU217_19115 PF01556 DnaJ C terminal domain KU217_19115 PF00684 DnaJ central domain KU217_19150 PF18272 single-stranded DNA binding TraI N-terminal subdomain KU217_19150 PF07057 DNA helicase TraI KU217_19150 PF18340 DNA relaxase TraI 2B/2B-like domain KU217_19150 PF08751 TrwC relaxase KU217_19185 PF02796 Helix-turn-helix domain of resolvase KU217_19185 PF00239 Resolvase, N terminal domain KU217_19200 PF01464 Transglycosylase SLT domain KU217_19235 PF10411 Disulfide bond isomerase protein N-terminus KU217_19235 PF13098 Thioredoxin-like domain KU217_19270 PF06834 TraU protein KU217_19280 PF06986 Type-1V conjugative transfer system mating pair stabilisation KU217_19295 PF06122 Conjugative relaxosome accessory transposon protein KU217_19315 PF00817 impB/mucB/samB family KU217_19315 PF13438 Domain of unknown function (DUF4113) KU217_19315 PF11799 impB/mucB/samB family C-terminal domain