locus-tag class description LRX86_00005 PF00308 Bacterial dnaA protein LRX86_00005 PF08299 Bacterial dnaA protein helix-turn-helix LRX86_00005 PF11638 DnaA N-terminal domain LRX86_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LRX86_00010 PF02767 DNA polymerase III beta subunit, central domain LRX86_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LRX86_00015 PF02463 RecF/RecN/SMC N terminal domain LRX86_00020 PF00204 DNA gyrase B LRX86_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LRX86_00020 PF18053 DNA gyrase B subunit insert domain LRX86_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_00020 PF01751 Toprim domain LRX86_00030 PF09335 SNARE associated Golgi protein LRX86_00035 PF00005 ABC transporter LRX86_00035 PF12848 ABC transporter LRX86_00055 PF01521 Iron-sulphur cluster biosynthesis LRX86_00060 PF00561 alpha/beta hydrolase fold LRX86_00065 PF03702 Anhydro-N-acetylmuramic acid kinase LRX86_00070 PF00579 tRNA synthetases class I (W and Y) LRX86_00110 PF00209 Sodium:neurotransmitter symporter family LRX86_00120 PF01189 16S rRNA methyltransferase RsmB/F LRX86_00120 PF01029 NusB family LRX86_00125 PF02911 Formyl transferase, C-terminal domain LRX86_00125 PF00551 Formyl transferase LRX86_00130 PF00920 Dehydratase family LRX86_00145 PF03466 LysR substrate binding domain LRX86_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_00150 PF00860 Permease family LRX86_00155 PF00311 Phosphoenolpyruvate carboxylase LRX86_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region LRX86_00160 PF00440 Bacterial regulatory proteins, tetR family LRX86_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_00170 PF00873 AcrB/AcrD/AcrF family LRX86_00180 PF00684 DnaJ central domain LRX86_00180 PF00226 DnaJ domain LRX86_00180 PF01556 DnaJ C terminal domain LRX86_00190 PF01113 Dihydrodipicolinate reductase, N-terminus LRX86_00190 PF05173 Dihydrodipicolinate reductase, C-terminus LRX86_00200 PF07690 Major Facilitator Superfamily LRX86_00205 PF00248 Aldo/keto reductase family LRX86_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_00210 PF03466 LysR substrate binding domain LRX86_00225 PF00392 Bacterial regulatory proteins, gntR family LRX86_00225 PF00155 Aminotransferase class I and II LRX86_00230 PF00107 Zinc-binding dehydrogenase LRX86_00230 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_00235 PF03352 Methyladenine glycosylase LRX86_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein LRX86_00250 PF14815 NUDIX domain LRX86_00250 PF00633 Helix-hairpin-helix motif LRX86_00250 PF10576 Iron-sulfur binding domain of endonuclease III LRX86_00260 PF02230 Phospholipase/Carboxylesterase LRX86_00265 PF07043 Protein of unknown function (DUF1328) LRX86_00270 PF03692 Putative zinc- or iron-chelating domain LRX86_00275 PF07995 Glucose / Sorbosone dehydrogenase LRX86_00280 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_00280 PF16193 AAA C-terminal domain LRX86_00280 PF12002 MgsA AAA+ ATPase C terminal LRX86_00285 PF01226 Formate/nitrite transporter LRX86_00295 PF01259 SAICAR synthetase LRX86_00305 PF00701 Dihydrodipicolinate synthetase family LRX86_00310 PF00857 Isochorismatase family LRX86_00315 PF01758 Sodium Bile acid symporter family LRX86_00320 PF01554 MatE LRX86_00325 PF04463 Protein of unknown function (DUF523) LRX86_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRX86_00350 PF00905 Penicillin binding protein transpeptidase domain LRX86_00380 PF02798 Glutathione S-transferase, N-terminal domain LRX86_00380 PF14497 Glutathione S-transferase, C-terminal domain LRX86_00390 PF00324 Amino acid permease LRX86_00400 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRX86_00400 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRX86_00410 PF00392 Bacterial regulatory proteins, gntR family LRX86_00410 PF07702 UTRA domain LRX86_00415 PF05962 HutD LRX86_00420 PF17391 Urocanase N-terminal domain LRX86_00420 PF17392 Urocanase C-terminal domain LRX86_00420 PF01175 Urocanase Rossmann-like domain LRX86_00425 PF00221 Aromatic amino acid lyase LRX86_00430 PF00324 Amino acid permease LRX86_00435 PF01979 Amidohydrolase family LRX86_00440 PF00491 Arginase family LRX86_00450 PF13419 Haloacid dehalogenase-like hydrolase LRX86_00455 PF01177 Asp/Glu/Hydantoin racemase LRX86_00490 PF00580 UvrD/REP helicase N-terminal domain LRX86_00490 PF13361 UvrD-like helicase C-terminal domain LRX86_00500 PF08463 EcoEI R protein C-terminal LRX86_00500 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LRX86_00500 PF04851 Type III restriction enzyme, res subunit LRX86_00500 PF00271 Helicase conserved C-terminal domain LRX86_00505 PF01420 Type I restriction modification DNA specificity domain LRX86_00510 PF02384 N-6 DNA Methylase LRX86_00510 PF12161 HsdM N-terminal domain LRX86_00520 PF01381 Helix-turn-helix LRX86_00535 PF00665 Integrase core domain LRX86_00540 PF13737 Transposase DDE domain LRX86_00545 PF01695 IstB-like ATP binding protein LRX86_00560 PF01636 Phosphotransferase enzyme family LRX86_00565 PF00665 Integrase core domain LRX86_00565 PF13936 Helix-turn-helix domain LRX86_00570 PF00753 Metallo-beta-lactamase superfamily LRX86_00580 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LRX86_00585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LRX86_00590 PF03091 CutA1 divalent ion tolerance protein LRX86_00600 PF01695 IstB-like ATP binding protein LRX86_00635 PF00665 Integrase core domain LRX86_00635 PF13936 Helix-turn-helix domain LRX86_00640 PF14863 Alkyl sulfatase dimerisation LRX86_00640 PF00753 Metallo-beta-lactamase superfamily LRX86_00640 PF14864 Alkyl sulfatase C-terminal LRX86_00650 PF00665 Integrase core domain LRX86_00650 PF13936 Helix-turn-helix domain LRX86_00655 PF01695 IstB-like ATP binding protein LRX86_00680 PF06527 TniQ LRX86_00680 PF15978 Tn7-like transposition protein D LRX86_00685 PF13401 AAA domain LRX86_00685 PF11426 Tn7 transposition regulator TnsC LRX86_00690 PF00665 Integrase core domain LRX86_00695 PF08721 TnsA endonuclease C terminal LRX86_00695 PF08722 TnsA endonuclease N terminal LRX86_00700 PF01380 SIS domain LRX86_00705 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_00705 PF14602 Hexapeptide repeat of succinyl-transferase LRX86_00705 PF12804 MobA-like NTP transferase domain LRX86_00710 PF04608 Phosphatidylglycerophosphatase A LRX86_00715 PF00586 AIR synthase related protein, N-terminal domain LRX86_00715 PF02769 AIR synthase related protein, C-terminal domain LRX86_00720 PF01029 NusB family LRX86_00725 PF00885 6,7-dimethyl-8-ribityllumazine synthase LRX86_00730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRX86_00730 PF00925 GTP cyclohydrolase II LRX86_00755 PF02580 D-Tyr-tRNA(Tyr) deacylase LRX86_00760 PF00199 Catalase LRX86_00760 PF06628 Catalase-related immune-responsive LRX86_00770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LRX86_00770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LRX86_00775 PF00581 Rhodanese-like domain LRX86_00780 PF02666 Phosphatidylserine decarboxylase LRX86_00790 PF11808 Phosphate regulon sensor protein PhoR LRX86_00790 PF00989 PAS fold LRX86_00790 PF00512 His Kinase A (phospho-acceptor) domain LRX86_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_00795 PF00072 Response regulator receiver domain LRX86_00795 PF00486 Transcriptional regulatory protein, C terminal LRX86_00805 PF00106 short chain dehydrogenase LRX86_00810 PF01554 MatE LRX86_00815 PF00155 Aminotransferase class I and II LRX86_00820 PF04286 Protein of unknown function (DUF445) LRX86_00835 PF04262 Glutamate-cysteine ligase LRX86_00840 PF02600 Disulfide bond formation protein DsbB LRX86_00845 PF13296 Putative type VI secretion system Rhs element Vgr LRX86_00845 PF04717 Type VI secretion system, phage-baseplate injector LRX86_00845 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRX86_00915 PF05728 Uncharacterised protein family (UPF0227) LRX86_00920 PF01751 Toprim domain LRX86_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_00920 PF00986 DNA gyrase B subunit, carboxyl terminus LRX86_00920 PF00204 DNA gyrase B LRX86_00925 PF00106 short chain dehydrogenase LRX86_00930 PF04115 Ureidoglycolate lyase LRX86_00935 PF03561 Allantoicase repeat LRX86_00940 PF01494 FAD binding domain LRX86_00950 PF00860 Permease family LRX86_00955 PF00576 HIUase/Transthyretin family LRX86_00985 PF11412 Disulphide bond corrector protein DsbC LRX86_00985 PF02683 Cytochrome C biogenesis protein transmembrane region LRX86_00990 PF07694 5TMR of 5TMR-LYT LRX86_00990 PF00990 Diguanylate cyclase, GGDEF domain LRX86_00995 PF07859 alpha/beta hydrolase fold LRX86_01005 PF03960 ArsC family LRX86_01010 PF03372 Endonuclease/Exonuclease/phosphatase family LRX86_01015 PF00156 Phosphoribosyl transferase domain LRX86_01025 PF07715 TonB-dependent Receptor Plug Domain LRX86_01025 PF00593 TonB dependent receptor LRX86_01035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LRX86_01035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LRX86_01040 PF03033 Glycosyltransferase family 28 N-terminal domain LRX86_01040 PF04101 Glycosyltransferase family 28 C-terminal domain LRX86_01045 PF02875 Mur ligase family, glutamate ligase domain LRX86_01045 PF01225 Mur ligase family, catalytic domain LRX86_01045 PF08245 Mur ligase middle domain LRX86_01050 PF01820 D-ala D-ala ligase N-terminus LRX86_01050 PF07478 D-ala D-ala ligase C-terminus LRX86_01055 PF03799 Cell division protein FtsQ LRX86_01055 PF08478 POTRA domain, FtsQ-type LRX86_01060 PF02491 SHS2 domain inserted in FTSA LRX86_01065 PF00091 Tubulin/FtsZ family, GTPase domain LRX86_01065 PF12327 FtsZ family, C-terminal domain LRX86_01070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LRX86_01080 PF01551 Peptidase family M23 LRX86_01085 PF17831 Pyruvate dehydrogenase E1 component middle domain LRX86_01085 PF00456 Transketolase, thiamine diphosphate binding domain LRX86_01090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRX86_01090 PF00364 Biotin-requiring enzyme LRX86_01090 PF02817 e3 binding domain LRX86_01100 PF01169 Uncharacterized protein family UPF0016 LRX86_01105 PF00593 TonB dependent receptor LRX86_01105 PF07715 TonB-dependent Receptor Plug Domain LRX86_01110 PF00258 Flavodoxin LRX86_01110 PF01613 Flavin reductase like domain LRX86_01115 PF03692 Putative zinc- or iron-chelating domain LRX86_01120 PF00571 CBS domain LRX86_01120 PF00478 IMP dehydrogenase / GMP reductase domain LRX86_01125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRX86_01125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRX86_01125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRX86_01125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRX86_01130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LRX86_01130 PF01243 Pyridoxamine 5'-phosphate oxidase LRX86_01135 PF02272 DHHA1 domain LRX86_01135 PF17768 RecJ OB domain LRX86_01135 PF01368 DHH family LRX86_01155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_01160 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LRX86_01165 PF04452 RNA methyltransferase LRX86_01170 PF00924 Mechanosensitive ion channel LRX86_01185 PF16177 Acetyl-coenzyme A synthetase N-terminus LRX86_01185 PF00501 AMP-binding enzyme LRX86_01185 PF13193 AMP-binding enzyme C-terminal domain LRX86_01190 PF00857 Isochorismatase family LRX86_01195 PF01037 Lrp/AsnC ligand binding domain LRX86_01200 PF00296 Luciferase-like monooxygenase LRX86_01205 PF03358 NADPH-dependent FMN reductase LRX86_01210 PF00072 Response regulator receiver domain LRX86_01210 PF00196 Bacterial regulatory proteins, luxR family LRX86_01220 PF00512 His Kinase A (phospho-acceptor) domain LRX86_01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_01220 PF01627 Hpt domain LRX86_01220 PF00072 Response regulator receiver domain LRX86_01220 PF00672 HAMP domain LRX86_01225 PF04341 Protein of unknown function, DUF485 LRX86_01230 PF00474 Sodium:solute symporter family LRX86_01240 PF02028 BCCT, betaine/carnitine/choline family transporter LRX86_01250 PF00990 Diguanylate cyclase, GGDEF domain LRX86_01255 PF17755 UvrA DNA-binding domain LRX86_01255 PF00005 ABC transporter LRX86_01255 PF17760 UvrA interaction domain LRX86_01260 PF16925 Tetracyclin repressor-like, C-terminal domain LRX86_01260 PF00440 Bacterial regulatory proteins, tetR family LRX86_01265 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_01265 PF00107 Zinc-binding dehydrogenase LRX86_01275 PF06942 GlpM protein LRX86_01280 PF08543 Phosphomethylpyrimidine kinase LRX86_01280 PF03070 TENA/THI-4/PQQC family LRX86_01280 PF02581 Thiamine monophosphate synthase LRX86_01290 PF07690 Major Facilitator Superfamily LRX86_01295 PF00436 Single-strand binding protein family LRX86_01305 PF03591 AzlC protein LRX86_01315 PF00324 Amino acid permease LRX86_01320 PF00155 Aminotransferase class I and II LRX86_01320 PF00392 Bacterial regulatory proteins, gntR family LRX86_01325 PF00202 Aminotransferase class-III LRX86_01330 PF00171 Aldehyde dehydrogenase family LRX86_01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_01340 PF00857 Isochorismatase family LRX86_01345 PF02678 Pirin LRX86_01345 PF05726 Pirin C-terminal cupin domain LRX86_01360 PF00144 Beta-lactamase LRX86_01370 PF01593 Flavin containing amine oxidoreductase LRX86_01390 PF07690 Major Facilitator Superfamily LRX86_01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_01395 PF03466 LysR substrate binding domain LRX86_01415 PF00248 Aldo/keto reductase family LRX86_01420 PF12833 Helix-turn-helix domain LRX86_01420 PF02311 AraC-like ligand binding domain LRX86_01450 PF01638 HxlR-like helix-turn-helix LRX86_01455 PF02525 Flavodoxin-like fold LRX86_01480 PF02705 K+ potassium transporter LRX86_01505 PF00230 Major intrinsic protein LRX86_01520 PF00977 Histidine biosynthesis protein LRX86_01525 PF01636 Phosphotransferase enzyme family LRX86_01540 PF03992 Antibiotic biosynthesis monooxygenase LRX86_01555 PF00005 ABC transporter LRX86_01555 PF00664 ABC transporter transmembrane region LRX86_01560 PF00977 Histidine biosynthesis protein LRX86_01575 PF00117 Glutamine amidotransferase class-I LRX86_01580 PF00475 Imidazoleglycerol-phosphate dehydratase LRX86_01600 PF00583 Acetyltransferase (GNAT) family LRX86_01605 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LRX86_01605 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LRX86_01615 PF00672 HAMP domain LRX86_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_01615 PF00512 His Kinase A (phospho-acceptor) domain LRX86_01620 PF00072 Response regulator receiver domain LRX86_01620 PF00486 Transcriptional regulatory protein, C terminal LRX86_01625 PF17674 HHH domain LRX86_01625 PF00575 S1 RNA binding domain LRX86_01625 PF09371 Tex-like protein N-terminal domain LRX86_01625 PF16921 Tex protein YqgF-like domain LRX86_01630 PF00916 Sulfate permease family LRX86_01630 PF01740 STAS domain LRX86_01635 PF00106 short chain dehydrogenase LRX86_01640 PF01053 Cys/Met metabolism PLP-dependent enzyme LRX86_01645 PF00005 ABC transporter LRX86_01645 PF12848 ABC transporter LRX86_01670 PF04191 Phospholipid methyltransferase LRX86_01690 PF00529 HlyD membrane-fusion protein of T1SS LRX86_01690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_01695 PF00873 AcrB/AcrD/AcrF family LRX86_01700 PF01545 Cation efflux family LRX86_01730 PF00324 Amino acid permease LRX86_01745 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRX86_01760 PF01795 MraW methylase family LRX86_01770 PF03717 Penicillin-binding Protein dimerisation domain LRX86_01770 PF00905 Penicillin binding protein transpeptidase domain LRX86_01775 PF08245 Mur ligase middle domain LRX86_01775 PF02875 Mur ligase family, glutamate ligase domain LRX86_01775 PF01225 Mur ligase family, catalytic domain LRX86_01780 PF08245 Mur ligase middle domain LRX86_01780 PF02875 Mur ligase family, glutamate ligase domain LRX86_01780 PF01225 Mur ligase family, catalytic domain LRX86_01785 PF00953 Glycosyl transferase family 4 LRX86_01795 PF13847 Methyltransferase domain LRX86_01800 PF00905 Penicillin binding protein transpeptidase domain LRX86_01800 PF00912 Transglycosylase LRX86_01800 PF17092 Penicillin-binding protein OB-like domain LRX86_01805 PF11104 Type IV pilus assembly protein PilM; LRX86_01810 PF05137 Fimbrial assembly protein (PilN) LRX86_01815 PF04350 Pilus assembly protein, PilO LRX86_01825 PF11741 AMIN domain LRX86_01825 PF00263 Bacterial type II and III secretion system protein LRX86_01825 PF07660 Secretin and TonB N terminus short domain LRX86_01825 PF03958 Bacterial type II/III secretion system short domain LRX86_01830 PF01202 Shikimate kinase LRX86_01835 PF01761 3-dehydroquinate synthase LRX86_01845 PF01493 GXGXG motif LRX86_01845 PF04898 Glutamate synthase central domain LRX86_01845 PF00310 Glutamine amidotransferases class-II LRX86_01845 PF01645 Conserved region in glutamate synthase LRX86_01850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LRX86_01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_01860 PF04011 LemA family LRX86_01865 PF04536 TPM domain LRX86_01875 PF07963 Prokaryotic N-terminal methylation motif LRX86_01875 PF00114 Pilin (bacterial filament) LRX86_01885 PF15864 Protein glycosylation ligase LRX86_01885 PF04932 O-Antigen ligase LRX86_01885 PF11846 Virulence factor membrane-bound polymerase, C-terminal LRX86_01890 PF00210 Ferritin-like domain LRX86_01895 PF04324 BFD-like [2Fe-2S] binding domain LRX86_01900 PF01042 Endoribonuclease L-PSP LRX86_01905 PF02824 TGS domain LRX86_01905 PF04607 Region found in RelA / SpoT proteins LRX86_01905 PF13291 ACT domain LRX86_01915 PF01192 RNA polymerase Rpb6 LRX86_01920 PF00625 Guanylate kinase LRX86_01925 PF02401 LytB protein LRX86_01965 PF00886 Ribosomal protein S16 LRX86_01970 PF01782 RimM N-terminal domain LRX86_01970 PF05239 PRC-barrel domain LRX86_01975 PF01746 tRNA (Guanine-1)-methyltransferase LRX86_01980 PF01245 Ribosomal protein L19 LRX86_01985 PF00561 alpha/beta hydrolase fold LRX86_01990 PF03280 Proteobacterial lipase chaperone protein LRX86_01995 PF09157 Pseudouridine synthase II TruB, C-terminal LRX86_01995 PF16198 tRNA pseudouridylate synthase B C-terminal domain LRX86_01995 PF01509 TruB family pseudouridylate synthase (N terminal domain) LRX86_02000 PF01925 Sulfite exporter TauE/SafE LRX86_02010 PF00892 EamA-like transporter family LRX86_02015 PF00892 EamA-like transporter family LRX86_02020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRX86_02020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRX86_02025 PF01565 FAD binding domain LRX86_02025 PF02913 FAD linked oxidases, C-terminal domain LRX86_02035 PF03992 Antibiotic biosynthesis monooxygenase LRX86_02040 PF02525 Flavodoxin-like fold LRX86_02050 PF07690 Major Facilitator Superfamily LRX86_02055 PF12805 FUSC-like inner membrane protein yccS LRX86_02060 PF00080 Copper/zinc superoxide dismutase (SODC) LRX86_02065 PF01594 AI-2E family transporter LRX86_02070 PF13614 AAA domain LRX86_02090 PF08241 Methyltransferase domain LRX86_02100 PF00324 Amino acid permease LRX86_02105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRX86_02105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRX86_02110 PF00202 Aminotransferase class-III LRX86_02115 PF04958 Arginine N-succinyltransferase beta subunit LRX86_02120 PF00171 Aldehyde dehydrogenase family LRX86_02125 PF04996 Succinylarginine dihydrolase LRX86_02130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LRX86_02145 PF00082 Subtilase family LRX86_02145 PF05922 Peptidase inhibitor I9 LRX86_02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_02160 PF03466 LysR substrate binding domain LRX86_02165 PF00892 EamA-like transporter family LRX86_02185 PF05746 DALR anticodon binding domain LRX86_02185 PF02092 Glycyl-tRNA synthetase beta subunit LRX86_02195 PF02091 Glycyl-tRNA synthetase alpha subunit LRX86_02200 PF07690 Major Facilitator Superfamily LRX86_02215 PF00571 CBS domain LRX86_02220 PF04024 PspC domain LRX86_02230 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_02230 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRX86_02240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LRX86_02240 PF01488 Shikimate / quinate 5-dehydrogenase LRX86_02240 PF08501 Shikimate dehydrogenase substrate binding domain LRX86_02245 PF01218 Coproporphyrinogen III oxidase LRX86_02250 PF00925 GTP cyclohydrolase II LRX86_02255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LRX86_02255 PF02780 Transketolase, C-terminal domain LRX86_02255 PF02779 Transketolase, pyrimidine binding domain LRX86_02260 PF00459 Inositol monophosphatase family LRX86_02265 PF03880 DbpA RNA binding domain LRX86_02265 PF00270 DEAD/DEAH box helicase LRX86_02265 PF12343 Cold shock protein DEAD box A LRX86_02265 PF00271 Helicase conserved C-terminal domain LRX86_02275 PF00005 ABC transporter LRX86_02280 PF02405 Permease MlaE LRX86_02290 PF05494 MlaC protein LRX86_02300 PF01544 CorA-like Mg2+ transporter protein LRX86_02305 PF03641 Possible lysine decarboxylase LRX86_02310 PF00293 NUDIX domain LRX86_02315 PF00156 Phosphoribosyl transferase domain LRX86_02320 PF17191 RecG wedge domain LRX86_02320 PF00271 Helicase conserved C-terminal domain LRX86_02320 PF00270 DEAD/DEAH box helicase LRX86_02335 PF01553 Acyltransferase LRX86_02345 PF00375 Sodium:dicarboxylate symporter family LRX86_02355 PF01926 50S ribosome-binding GTPase LRX86_02360 PF02082 Transcriptional regulator LRX86_02365 PF00970 Oxidoreductase FAD-binding domain LRX86_02365 PF00042 Globin LRX86_02365 PF00175 Oxidoreductase NAD-binding domain LRX86_02375 PF05872 Bacterial protein of unknown function (DUF853) LRX86_02380 PF01053 Cys/Met metabolism PLP-dependent enzyme LRX86_02385 PF00117 Glutamine amidotransferase class-I LRX86_02390 PF00338 Ribosomal protein S10p/S20e LRX86_02395 PF00297 Ribosomal protein L3 LRX86_02400 PF00573 Ribosomal protein L4/L1 family LRX86_02405 PF00276 Ribosomal protein L23 LRX86_02410 PF00181 Ribosomal Proteins L2, RNA binding domain LRX86_02410 PF03947 Ribosomal Proteins L2, C-terminal domain LRX86_02415 PF00203 Ribosomal protein S19 LRX86_02420 PF00237 Ribosomal protein L22p/L17e LRX86_02430 PF00252 Ribosomal protein L16p/L10e LRX86_02435 PF00831 Ribosomal L29 protein LRX86_02440 PF00366 Ribosomal protein S17 LRX86_02445 PF00238 Ribosomal protein L14p/L23e LRX86_02450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LRX86_02450 PF00467 KOW motif LRX86_02455 PF00673 ribosomal L5P family C-terminus LRX86_02455 PF00281 Ribosomal protein L5 LRX86_02460 PF00253 Ribosomal protein S14p/S29e LRX86_02465 PF00410 Ribosomal protein S8 LRX86_02470 PF00347 Ribosomal protein L6 LRX86_02475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LRX86_02480 PF00333 Ribosomal protein S5, N-terminal domain LRX86_02480 PF03719 Ribosomal protein S5, C-terminal domain LRX86_02485 PF00327 Ribosomal protein L30p/L7e LRX86_02490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LRX86_02495 PF00344 SecY translocase LRX86_02500 PF00444 Ribosomal protein L36 LRX86_02505 PF00416 Ribosomal protein S13/S18 LRX86_02510 PF00411 Ribosomal protein S11 LRX86_02515 PF01479 S4 domain LRX86_02515 PF00163 Ribosomal protein S4/S9 N-terminal domain LRX86_02520 PF01000 RNA polymerase Rpb3/RpoA insert domain LRX86_02520 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LRX86_02520 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LRX86_02525 PF01196 Ribosomal protein L17 LRX86_02530 PF00743 Flavin-binding monooxygenase-like LRX86_02535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_02535 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_02535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_02540 PF03937 Flavinator of succinate dehydrogenase LRX86_02570 PF09526 Probable metal-binding protein (DUF2387) LRX86_02575 PF01432 Peptidase family M3 LRX86_02580 PF17876 Cold shock domain LRX86_02580 PF08461 Ribonuclease R winged-helix domain LRX86_02580 PF08206 Ribonuclease B OB domain LRX86_02580 PF00773 RNB domain LRX86_02580 PF00575 S1 RNA binding domain LRX86_02625 PF01557 Fumarylacetoacetate (FAA) hydrolase family LRX86_02630 PF12833 Helix-turn-helix domain LRX86_02635 PF00892 EamA-like transporter family LRX86_02640 PF03631 Virulence factor BrkB LRX86_02645 PF03358 NADPH-dependent FMN reductase LRX86_02670 PF02130 Uncharacterized protein family UPF0054 LRX86_02675 PF02562 PhoH-like protein LRX86_02680 PF04055 Radical SAM superfamily LRX86_02680 PF01938 TRAM domain LRX86_02680 PF00919 Uncharacterized protein family UPF0004 LRX86_02685 PF01551 Peptidase family M23 LRX86_02685 PF10145 Phage-related minor tail protein LRX86_02685 PF01464 Transglycosylase SLT domain LRX86_02695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRX86_02695 PF00056 lactate/malate dehydrogenase, NAD binding domain LRX86_02715 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LRX86_02720 PF01066 CDP-alcohol phosphatidyltransferase LRX86_02765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_02765 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_02765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_02770 PF17932 Tetracyclin repressor-like, C-terminal domain LRX86_02770 PF00440 Bacterial regulatory proteins, tetR family LRX86_02785 PF01039 Carboxyl transferase domain LRX86_02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_02790 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_02800 PF00364 Biotin-requiring enzyme LRX86_02800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRX86_02800 PF02785 Biotin carboxylase C-terminal domain LRX86_02800 PF00289 Biotin carboxylase, N-terminal domain LRX86_02810 PF04386 Stringent starvation protein B LRX86_02815 PF00043 Glutathione S-transferase, C-terminal domain LRX86_02815 PF13417 Glutathione S-transferase, N-terminal domain LRX86_02820 PF00380 Ribosomal protein S9/S16 LRX86_02825 PF00572 Ribosomal protein L13 LRX86_02830 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LRX86_02835 PF00398 Ribosomal RNA adenine dimethylase LRX86_02840 PF00149 Calcineurin-like phosphoesterase LRX86_02860 PF16360 GTP-binding GTPase Middle Region LRX86_02860 PF13167 GTP-binding GTPase N-terminal LRX86_02860 PF01926 50S ribosome-binding GTPase LRX86_02870 PF13091 PLD-like domain LRX86_02875 PF10518 TAT (twin-arginine translocation) pathway signal sequence LRX86_02875 PF00149 Calcineurin-like phosphoesterase LRX86_02880 PF01389 OmpA-like transmembrane domain LRX86_02880 PF00691 OmpA family LRX86_02885 PF17152 Periplasmic sensor domain LRX86_02885 PF00990 Diguanylate cyclase, GGDEF domain LRX86_02920 PF00872 Transposase, Mutator family LRX86_02925 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_02925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRX86_02935 PF04273 Putative phosphatase (DUF442) LRX86_02935 PF00753 Metallo-beta-lactamase superfamily LRX86_02945 PF00085 Thioredoxin LRX86_02950 PF03061 Thioesterase superfamily LRX86_02960 PF04461 Protein of unknown function (DUF520) LRX86_02970 PF01266 FAD dependent oxidoreductase LRX86_02970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LRX86_02980 PF03795 YCII-related domain LRX86_02985 PF04279 Intracellular septation protein A LRX86_02990 PF02811 PHP domain LRX86_02995 PF01062 Bestrophin, RFP-TM, chloride channel LRX86_03000 PF04002 RadC-like JAB domain LRX86_03005 PF04127 DNA / pantothenate metabolism flavoprotein LRX86_03005 PF02441 Flavoprotein LRX86_03015 PF07549 SecD/SecF GG Motif LRX86_03015 PF02355 Protein export membrane protein LRX86_03020 PF07549 SecD/SecF GG Motif LRX86_03020 PF13721 SecD export protein N-terminal TM region LRX86_03020 PF02355 Protein export membrane protein LRX86_03025 PF02699 Preprotein translocase subunit LRX86_03030 PF01702 Queuine tRNA-ribosyltransferase LRX86_03055 PF02547 Queuosine biosynthesis protein LRX86_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_03065 PF07689 KaiB domain LRX86_03065 PF00512 His Kinase A (phospho-acceptor) domain LRX86_03070 PF03710 Glutamate-ammonia ligase adenylyltransferase LRX86_03070 PF08335 GlnD PII-uridylyltransferase LRX86_03075 PF01063 Amino-transferase class IV LRX86_03085 PF01522 Polysaccharide deacetylase LRX86_03090 PF13439 Glycosyltransferase Family 4 LRX86_03090 PF00534 Glycosyl transferases group 1 LRX86_03100 PF13439 Glycosyltransferase Family 4 LRX86_03100 PF00534 Glycosyl transferases group 1 LRX86_03120 PF09612 Bacterial protein of unknown function (HtrL_YibB) LRX86_03125 PF01501 Glycosyl transferase family 8 LRX86_03125 PF08437 Glycosyl transferase family 8 C-terminal LRX86_03140 PF02938 GAD domain LRX86_03140 PF00152 tRNA synthetases class II (D, K and N) LRX86_03140 PF01336 OB-fold nucleic acid binding domain LRX86_03150 PF07715 TonB-dependent Receptor Plug Domain LRX86_03150 PF00593 TonB dependent receptor LRX86_03180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_03180 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_03180 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRX86_03180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_03185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_03185 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_03185 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRX86_03185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_03195 PF00512 His Kinase A (phospho-acceptor) domain LRX86_03195 PF00672 HAMP domain LRX86_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_03200 PF00072 Response regulator receiver domain LRX86_03200 PF00486 Transcriptional regulatory protein, C terminal LRX86_03205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LRX86_03220 PF03009 Glycerophosphoryl diester phosphodiesterase family LRX86_03225 PF01923 Cobalamin adenosyltransferase LRX86_03230 PF07715 TonB-dependent Receptor Plug Domain LRX86_03230 PF00593 TonB dependent receptor LRX86_03235 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LRX86_03240 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_03265 PF00290 Tryptophan synthase alpha chain LRX86_03270 PF01039 Carboxyl transferase domain LRX86_03275 PF08245 Mur ligase middle domain LRX86_03275 PF02875 Mur ligase family, glutamate ligase domain LRX86_03290 PF00753 Metallo-beta-lactamase superfamily LRX86_03295 PF10417 C-terminal domain of 1-Cys peroxiredoxin LRX86_03295 PF00578 AhpC/TSA family LRX86_03300 PF02810 SEC-C motif LRX86_03300 PF07517 SecA DEAD-like domain LRX86_03300 PF01043 SecA preprotein cross-linking domain LRX86_03300 PF07516 SecA Wing and Scaffold domain LRX86_03310 PF07690 Major Facilitator Superfamily LRX86_03310 PF00083 Sugar (and other) transporter LRX86_03315 PF03006 Haemolysin-III related LRX86_03340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRX86_03340 PF00378 Enoyl-CoA hydratase/isomerase LRX86_03340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRX86_03345 PF00108 Thiolase, N-terminal domain LRX86_03345 PF02803 Thiolase, C-terminal domain LRX86_03350 PF12833 Helix-turn-helix domain LRX86_03350 PF02311 AraC-like ligand binding domain LRX86_03355 PF02515 CoA-transferase family III LRX86_03360 PF04966 Carbohydrate-selective porin, OprB family LRX86_03365 PF01011 PQQ enzyme repeat LRX86_03370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRX86_03370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRX86_03380 PF00893 Small Multidrug Resistance protein LRX86_03390 PF00108 Thiolase, N-terminal domain LRX86_03390 PF02803 Thiolase, C-terminal domain LRX86_03400 PF13505 Outer membrane protein beta-barrel domain LRX86_03400 PF00691 OmpA family LRX86_03410 PF01139 tRNA-splicing ligase RtcB LRX86_03415 PF00324 Amino acid permease LRX86_03420 PF05175 Methyltransferase small domain LRX86_03420 PF08468 Methyltransferase small domain N-terminal LRX86_03425 PF00860 Permease family LRX86_03430 PF00679 Elongation factor G C-terminus LRX86_03430 PF00009 Elongation factor Tu GTP binding domain LRX86_03430 PF03144 Elongation factor Tu domain 2 LRX86_03435 PF01741 Large-conductance mechanosensitive channel, MscL LRX86_03450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LRX86_03450 PF06827 Zinc finger found in FPG and IleRS LRX86_03450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LRX86_03455 PF02245 Methylpurine-DNA glycosylase (MPG) LRX86_03465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_03480 PF13098 Thioredoxin-like domain LRX86_03480 PF10411 Disulfide bond isomerase protein N-terminus LRX86_03485 PF01571 Aminomethyltransferase folate-binding domain LRX86_03495 PF04343 Protein of unknown function, DUF488 LRX86_03500 PF03831 PhnA domain LRX86_03500 PF08274 PhnA Zinc-Ribbon LRX86_03505 PF07411 Domain of unknown function (DUF1508) LRX86_03510 PF04073 Aminoacyl-tRNA editing domain LRX86_03510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRX86_03510 PF03129 Anticodon binding domain LRX86_03540 PF00905 Penicillin binding protein transpeptidase domain LRX86_03565 PF00072 Response regulator receiver domain LRX86_03570 PF00072 Response regulator receiver domain LRX86_03575 PF01584 CheW-like domain LRX86_03580 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LRX86_03580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRX86_03585 PF01584 CheW-like domain LRX86_03585 PF01627 Hpt domain LRX86_03585 PF00072 Response regulator receiver domain LRX86_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_03595 PF01546 Peptidase family M20/M25/M40 LRX86_03595 PF07687 Peptidase dimerisation domain LRX86_03600 PF08085 Entericidin EcnA/B family LRX86_03610 PF04304 Protein of unknown function (DUF454) LRX86_03615 PF17969 L,D-transpeptidase C-terminal domain LRX86_03615 PF03734 L,D-transpeptidase catalytic domain LRX86_03655 PF00175 Oxidoreductase NAD-binding domain LRX86_03655 PF00258 Flavodoxin LRX86_03655 PF00667 FAD binding domain LRX86_03665 PF12805 FUSC-like inner membrane protein yccS LRX86_03670 PF07690 Major Facilitator Superfamily LRX86_03675 PF00881 Nitroreductase family LRX86_03690 PF01235 Sodium:alanine symporter family LRX86_03695 PF01734 Patatin-like phospholipase LRX86_03700 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_03700 PF13291 ACT domain LRX86_03705 PF05992 SbmA/BacA-like family LRX86_03730 PF02934 GatB/GatE catalytic domain LRX86_03730 PF02637 GatB domain LRX86_03735 PF01425 Amidase LRX86_03740 PF02686 Glu-tRNAGln amidotransferase C subunit LRX86_03750 PF04085 rod shape-determining protein MreC LRX86_03755 PF04093 rod shape-determining protein MreD LRX86_03760 PF02545 Maf-like protein LRX86_03765 PF00575 S1 RNA binding domain LRX86_03765 PF10150 Ribonuclease E/G family LRX86_03775 PF06974 Protein of unknown function (DUF1298) LRX86_03775 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LRX86_03780 PF01507 Phosphoadenosine phosphosulfate reductase family LRX86_03795 PF02525 Flavodoxin-like fold LRX86_03815 PF02673 Bacitracin resistance protein BacA LRX86_03820 PF06719 AraC-type transcriptional regulator N-terminus LRX86_03820 PF12833 Helix-turn-helix domain LRX86_03825 PF00698 Acyl transferase domain LRX86_03825 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_03825 PF08990 Erythronolide synthase docking LRX86_03825 PF09277 Erythronolide synthase, docking LRX86_03825 PF16197 Ketoacyl-synthetase C-terminal extension LRX86_03825 PF00109 Beta-ketoacyl synthase, N-terminal domain LRX86_03825 PF08659 KR domain LRX86_03825 PF02801 Beta-ketoacyl synthase, C-terminal domain LRX86_03825 PF00550 Phosphopantetheine attachment site LRX86_03825 PF14765 Polyketide synthase dehydratase LRX86_03830 PF01965 DJ-1/PfpI family LRX86_03840 PF00324 Amino acid permease LRX86_03845 PF04303 PrpF protein LRX86_03850 PF00348 Polyprenyl synthetase LRX86_03855 PF04237 YjbR LRX86_03860 PF01145 SPFH domain / Band 7 family LRX86_03870 PF01734 Patatin-like phospholipase LRX86_03890 PF00884 Sulfatase LRX86_03890 PF08019 Phosphoethanolamine transferase EptA/EptB LRX86_03895 PF00072 Response regulator receiver domain LRX86_03895 PF00486 Transcriptional regulatory protein, C terminal LRX86_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_03900 PF08521 Two-component sensor kinase N-terminal LRX86_03900 PF00512 His Kinase A (phospho-acceptor) domain LRX86_03910 PF00909 Ammonium Transporter Family LRX86_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_03915 PF03466 LysR substrate binding domain LRX86_03935 PF00133 tRNA synthetases class I (I, L, M and V) LRX86_03935 PF08264 Anticodon-binding domain of tRNA LRX86_03935 PF10458 Valyl tRNA synthetase tRNA binding arm LRX86_03955 PF01906 Putative heavy-metal-binding LRX86_03960 PF01906 Putative heavy-metal-binding LRX86_03965 PF02321 Outer membrane efflux protein LRX86_03970 PF00873 AcrB/AcrD/AcrF family LRX86_03975 PF00529 HlyD membrane-fusion protein of T1SS LRX86_03975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_03980 PF01569 PAP2 superfamily LRX86_03990 PF00348 Polyprenyl synthetase LRX86_04000 PF00829 Ribosomal prokaryotic L21 protein LRX86_04005 PF01016 Ribosomal L27 protein LRX86_04010 PF03548 Outer membrane lipoprotein carrier protein LolA LRX86_04020 PF02403 Seryl-tRNA synthetase N-terminal domain LRX86_04020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRX86_04025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRX86_04025 PF14824 Sirohaem biosynthesis protein central LRX86_04025 PF10414 Sirohaem synthase dimerisation region LRX86_04030 PF00588 SpoU rRNA Methylase family LRX86_04040 PF03358 NADPH-dependent FMN reductase LRX86_04045 PF13520 Amino acid permease LRX86_04050 PF00465 Iron-containing alcohol dehydrogenase LRX86_04060 PF03099 Biotin/lipoate A/B protein ligase family LRX86_04065 PF04359 Protein of unknown function (DUF493) LRX86_04070 PF04546 Sigma-70, non-essential region LRX86_04070 PF03979 Sigma-70 factor, region 1.1 LRX86_04070 PF00140 Sigma-70 factor, region 1.2 LRX86_04070 PF04542 Sigma-70 region 2 LRX86_04070 PF04545 Sigma-70, region 4 LRX86_04070 PF04539 Sigma-70 region 3 LRX86_04085 PF00581 Rhodanese-like domain LRX86_04085 PF17773 UPF0176 acylphosphatase like domain LRX86_04095 PF00285 Citrate synthase, C-terminal domain LRX86_04100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LRX86_04105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LRX86_04110 PF00890 FAD binding domain LRX86_04110 PF02910 Fumarate reductase flavoprotein C-term LRX86_04115 PF13085 2Fe-2S iron-sulfur cluster binding domain LRX86_04130 PF00676 Dehydrogenase E1 component LRX86_04130 PF02779 Transketolase, pyrimidine binding domain LRX86_04130 PF16870 2-oxoglutarate dehydrogenase C-terminal LRX86_04130 PF16078 2-oxoglutarate dehydrogenase N-terminus LRX86_04135 PF00364 Biotin-requiring enzyme LRX86_04135 PF02817 e3 binding domain LRX86_04135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRX86_04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_04140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRX86_04145 PF08442 ATP-grasp domain LRX86_04145 PF00549 CoA-ligase LRX86_04150 PF00549 CoA-ligase LRX86_04150 PF02629 CoA binding domain LRX86_04155 PF00579 tRNA synthetases class I (W and Y) LRX86_04160 PF05661 Protein of unknown function (DUF808) LRX86_04165 PF04228 Putative neutral zinc metallopeptidase LRX86_04170 PF00999 Sodium/hydrogen exchanger family LRX86_04185 PF09587 Bacterial capsule synthesis protein PGA_cap LRX86_04195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRX86_04200 PF00582 Universal stress protein family LRX86_04205 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_04210 PF01272 Transcription elongation factor, GreA/GreB, C-term LRX86_04210 PF03449 Transcription elongation factor, N-terminal LRX86_04215 PF02142 MGS-like domain LRX86_04215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LRX86_04215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRX86_04220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LRX86_04220 PF00117 Glutamine amidotransferase class-I LRX86_04235 PF01985 CRS1 / YhbY (CRM) domain LRX86_04240 PF01728 FtsJ-like methyltransferase LRX86_04245 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_04245 PF17862 AAA+ lid domain LRX86_04245 PF06480 FtsH Extracellular LRX86_04245 PF01434 Peptidase family M41 LRX86_04250 PF00809 Pterin binding enzyme LRX86_04270 PF09423 PhoD-like phosphatase LRX86_04270 PF16655 PhoD-like phosphatase, N-terminal domain LRX86_04285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LRX86_04285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LRX86_04300 PF00083 Sugar (and other) transporter LRX86_04305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRX86_04305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRX86_04310 PF01266 FAD dependent oxidoreductase LRX86_04310 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LRX86_04315 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LRX86_04315 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LRX86_04320 PF00781 Diacylglycerol kinase catalytic domain LRX86_04325 PF00149 Calcineurin-like phosphoesterase LRX86_04330 PF00166 Chaperonin 10 Kd subunit LRX86_04335 PF00118 TCP-1/cpn60 chaperonin family LRX86_04340 PF01219 Prokaryotic diacylglycerol kinase LRX86_04345 PF00753 Metallo-beta-lactamase superfamily LRX86_04350 PF03009 Glycerophosphoryl diester phosphodiesterase family LRX86_04355 PF00873 AcrB/AcrD/AcrF family LRX86_04365 PF01435 Peptidase family M48 LRX86_04370 PF01464 Transglycosylase SLT domain LRX86_04375 PF01171 PP-loop family LRX86_04385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRX86_04385 PF01464 Transglycosylase SLT domain LRX86_04390 PF01272 Transcription elongation factor, GreA/GreB, C-term LRX86_04390 PF03449 Transcription elongation factor, N-terminal LRX86_04405 PF00501 AMP-binding enzyme LRX86_04405 PF13193 AMP-binding enzyme C-terminal domain LRX86_04405 PF00550 Phosphopantetheine attachment site LRX86_04405 PF00975 Thioesterase domain LRX86_04405 PF00668 Condensation domain LRX86_04415 PF09857 Putative toxin of bacterial toxin-antitoxin pair LRX86_04450 PF00881 Nitroreductase family LRX86_04465 PF02595 Glycerate kinase family LRX86_04470 PF00384 Molybdopterin oxidoreductase LRX86_04475 PF02634 FdhD/NarQ family LRX86_04485 PF11890 Domain of unknown function (DUF3410) LRX86_04485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRX86_04485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRX86_04490 PF00152 tRNA synthetases class II (D, K and N) LRX86_04500 PF18073 Rubredoxin metal binding domain LRX86_04505 PF00324 Amino acid permease LRX86_04515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LRX86_04515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LRX86_04520 PF01678 Diaminopimelate epimerase LRX86_04525 PF01810 LysE type translocator LRX86_04530 PF02899 Phage integrase, N-terminal SAM-like domain LRX86_04530 PF00589 Phage integrase family LRX86_04535 PF01012 Electron transfer flavoprotein domain LRX86_04540 PF01012 Electron transfer flavoprotein domain LRX86_04540 PF00766 Electron transfer flavoprotein FAD-binding domain LRX86_04545 PF00521 DNA gyrase/topoisomerase IV, subunit A LRX86_04545 PF03989 DNA gyrase C-terminal domain, beta-propeller LRX86_04560 PF00535 Glycosyl transferase family 2 LRX86_04580 PF13533 Biotin-lipoyl like LRX86_04590 PF00266 Aminotransferase class-V LRX86_04605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LRX86_04615 PF02687 FtsX-like permease family LRX86_04615 PF12704 MacB-like periplasmic core domain LRX86_04620 PF00005 ABC transporter LRX86_04625 PF03772 Competence protein LRX86_04625 PF13567 Domain of unknown function (DUF4131) LRX86_04625 PF00753 Metallo-beta-lactamase superfamily LRX86_04635 PF06965 Na+/H+ antiporter 1 LRX86_04635 PF01343 Peptidase family S49 LRX86_04640 PF12697 Alpha/beta hydrolase family LRX86_04645 PF00551 Formyl transferase LRX86_04650 PF02769 AIR synthase related protein, C-terminal domain LRX86_04650 PF00586 AIR synthase related protein, N-terminal domain LRX86_04655 PF01594 AI-2E family transporter LRX86_04660 PF00308 Bacterial dnaA protein LRX86_04660 PF08299 Bacterial dnaA protein helix-turn-helix LRX86_04660 PF11638 DnaA N-terminal domain LRX86_04680 PF00665 Integrase core domain LRX86_04680 PF13936 Helix-turn-helix domain LRX86_04710 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRX86_04710 PF00588 SpoU rRNA Methylase family LRX86_04715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LRX86_04725 PF00691 OmpA family LRX86_04730 PF07676 WD40-like Beta Propeller Repeat LRX86_04730 PF04052 TolB amino-terminal domain LRX86_04740 PF02472 Biopolymer transport protein ExbD/TolR LRX86_04745 PF01618 MotA/TolQ/ExbB proton channel family LRX86_04750 PF03061 Thioesterase superfamily LRX86_04755 PF01546 Peptidase family M20/M25/M40 LRX86_04755 PF07687 Peptidase dimerisation domain LRX86_04760 PF05496 Holliday junction DNA helicase RuvB P-loop domain LRX86_04760 PF05491 RuvB C-terminal winged helix domain LRX86_04760 PF17864 RuvB AAA lid domain LRX86_04765 PF07499 RuvA, C-terminal domain LRX86_04765 PF01330 RuvA N terminal domain LRX86_04770 PF01966 HD domain LRX86_04780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LRX86_04780 PF02769 AIR synthase related protein, C-terminal domain LRX86_04780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LRX86_04785 PF07690 Major Facilitator Superfamily LRX86_04790 PF01784 NIF3 (NGG1p interacting factor 3) LRX86_04795 PF00378 Enoyl-CoA hydratase/isomerase LRX86_04800 PF01467 Cytidylyltransferase-like LRX86_04800 PF00293 NUDIX domain LRX86_04810 PF00578 AhpC/TSA family LRX86_04825 PF06508 Queuosine biosynthesis protein QueC LRX86_04835 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_04835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LRX86_04835 PF14602 Hexapeptide repeat of succinyl-transferase LRX86_04845 PF03466 LysR substrate binding domain LRX86_04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_04850 PF00005 ABC transporter LRX86_04850 PF12857 TOBE-like domain LRX86_04855 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_04860 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_04875 PF01063 Amino-transferase class IV LRX86_04880 PF02618 YceG-like family LRX86_04885 PF02223 Thymidylate kinase LRX86_04895 PF02910 Fumarate reductase flavoprotein C-term LRX86_04895 PF00890 FAD binding domain LRX86_04900 PF13180 PDZ domain LRX86_04910 PF00009 Elongation factor Tu GTP binding domain LRX86_04910 PF03144 Elongation factor Tu domain 2 LRX86_04910 PF06421 GTP-binding protein LepA C-terminus LRX86_04910 PF00679 Elongation factor G C-terminus LRX86_04915 PF10502 Signal peptidase, peptidase S26 LRX86_04925 PF00035 Double-stranded RNA binding motif LRX86_04925 PF14622 Ribonuclease-III-like LRX86_04930 PF07650 KH domain LRX86_04930 PF01926 50S ribosome-binding GTPase LRX86_04940 PF11967 Recombination protein O N terminal LRX86_04940 PF02565 Recombination protein O C terminal LRX86_04945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LRX86_04950 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LRX86_04955 PF00106 short chain dehydrogenase LRX86_04985 PF00155 Aminotransferase class I and II LRX86_04995 PF17151 Periplasmic sensor domain LRX86_04995 PF00990 Diguanylate cyclase, GGDEF domain LRX86_05005 PF00271 Helicase conserved C-terminal domain LRX86_05005 PF04851 Type III restriction enzyme, res subunit LRX86_05005 PF02151 UvrB/uvrC motif LRX86_05005 PF12344 Ultra-violet resistance protein B LRX86_05005 PF17757 UvrB interaction domain LRX86_05015 PF00892 EamA-like transporter family LRX86_05020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRX86_05020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRX86_05035 PF01018 GTP1/OBG LRX86_05035 PF01926 50S ribosome-binding GTPase LRX86_05040 PF00696 Amino acid kinase family LRX86_05040 PF01472 PUA domain LRX86_05050 PF07759 Protein of unknown function (DUF1615) LRX86_05055 PF01207 Dihydrouridine synthase (Dus) LRX86_05060 PF03060 Nitronate monooxygenase LRX86_05075 PF02350 UDP-N-acetylglucosamine 2-epimerase LRX86_05105 PF03441 FAD binding domain of DNA photolyase LRX86_05105 PF00875 DNA photolyase LRX86_05110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_05120 PF00768 D-alanyl-D-alanine carboxypeptidase LRX86_05120 PF07943 Penicillin-binding protein 5, C-terminal domain LRX86_05130 PF03971 Monomeric isocitrate dehydrogenase LRX86_05135 PF00849 RNA pseudouridylate synthase LRX86_05140 PF00180 Isocitrate/isopropylmalate dehydrogenase LRX86_05160 PF06779 Uncharacterised MFS-type transporter YbfB LRX86_05165 PF03466 LysR substrate binding domain LRX86_05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_05170 PF00375 Sodium:dicarboxylate symporter family LRX86_05175 PF02567 Phenazine biosynthesis-like protein LRX86_05180 PF00675 Insulinase (Peptidase family M16) LRX86_05180 PF05193 Peptidase M16 inactive domain LRX86_05205 PF02581 Thiamine monophosphate synthase LRX86_05210 PF00202 Aminotransferase class-III LRX86_05220 PF00849 RNA pseudouridylate synthase LRX86_05225 PF18337 RapA N-terminal Tudor like domain LRX86_05225 PF18339 RapA N-terminal Tudor like domain 1 LRX86_05225 PF00176 SNF2 family N-terminal domain LRX86_05225 PF12137 RNA polymerase recycling family C-terminal LRX86_05225 PF00271 Helicase conserved C-terminal domain LRX86_05235 PF00440 Bacterial regulatory proteins, tetR family LRX86_05240 PF00970 Oxidoreductase FAD-binding domain LRX86_05240 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_05240 PF00175 Oxidoreductase NAD-binding domain LRX86_05245 PF00487 Fatty acid desaturase LRX86_05255 PF17754 MftR C-terminal domain LRX86_05255 PF00440 Bacterial regulatory proteins, tetR family LRX86_05270 PF00202 Aminotransferase class-III LRX86_05275 PF00282 Pyridoxal-dependent decarboxylase conserved domain LRX86_05280 PF00171 Aldehyde dehydrogenase family LRX86_05285 PF01037 Lrp/AsnC ligand binding domain LRX86_05290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRX86_05290 PF00205 Thiamine pyrophosphate enzyme, central domain LRX86_05290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRX86_05295 PF00324 Amino acid permease LRX86_05300 PF12849 PBP superfamily domain LRX86_05305 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_05310 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_05315 PF00005 ABC transporter LRX86_05320 PF01343 Peptidase family S49 LRX86_05320 PF08496 Peptidase family S49 N-terminal LRX86_05335 PF08328 Adenylosuccinate lyase C-terminal LRX86_05335 PF00206 Lyase LRX86_05340 PF04356 Protein of unknown function (DUF489) LRX86_05350 PF13344 Haloacid dehalogenase-like hydrolase LRX86_05350 PF00293 NUDIX domain LRX86_05355 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_05360 PF07943 Penicillin-binding protein 5, C-terminal domain LRX86_05360 PF00768 D-alanyl-D-alanine carboxypeptidase LRX86_05375 PF01975 Survival protein SurE LRX86_05380 PF01551 Peptidase family M23 LRX86_05380 PF01476 LysM domain LRX86_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_05385 PF03466 LysR substrate binding domain LRX86_05390 PF13654 AAA domain LRX86_05390 PF05362 Lon protease (S16) C-terminal proteolytic domain LRX86_05395 PF07690 Major Facilitator Superfamily LRX86_05400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRX86_05405 PF13593 SBF-like CPA transporter family (DUF4137) LRX86_05410 PF01197 Ribosomal protein L31 LRX86_05415 PF12792 CSS motif domain associated with EAL LRX86_05415 PF00563 EAL domain LRX86_05425 PF04055 Radical SAM superfamily LRX86_05430 PF08207 Elongation factor P (EF-P) KOW-like domain LRX86_05430 PF01132 Elongation factor P (EF-P) OB domain LRX86_05430 PF09285 Elongation factor P, C-terminal LRX86_05435 PF02554 Carbon starvation protein CstA LRX86_05435 PF13722 5TM C-terminal transporter carbon starvation CstA LRX86_05440 PF04328 Selenoprotein, putative LRX86_05455 PF01966 HD domain LRX86_05455 PF13286 Phosphohydrolase-associated domain LRX86_05465 PF01966 HD domain LRX86_05465 PF13286 Phosphohydrolase-associated domain LRX86_05470 PF01381 Helix-turn-helix LRX86_05495 PF02678 Pirin LRX86_05495 PF17954 Quercetinase C-terminal cupin domain LRX86_05500 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_05505 PF13309 HTH domain LRX86_05505 PF08348 YheO-like PAS domain LRX86_05515 PF00501 AMP-binding enzyme LRX86_05515 PF13193 AMP-binding enzyme C-terminal domain LRX86_05515 PF00668 Condensation domain LRX86_05515 PF00550 Phosphopantetheine attachment site LRX86_05520 PF00975 Thioesterase domain LRX86_05520 PF00668 Condensation domain LRX86_05520 PF13193 AMP-binding enzyme C-terminal domain LRX86_05520 PF00501 AMP-binding enzyme LRX86_05520 PF00550 Phosphopantetheine attachment site LRX86_05525 PF01032 FecCD transport family LRX86_05530 PF01032 FecCD transport family LRX86_05535 PF00005 ABC transporter LRX86_05540 PF01497 Periplasmic binding protein LRX86_05545 PF00593 TonB dependent receptor LRX86_05545 PF07715 TonB-dependent Receptor Plug Domain LRX86_05550 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LRX86_05555 PF00501 AMP-binding enzyme LRX86_05555 PF00668 Condensation domain LRX86_05555 PF00550 Phosphopantetheine attachment site LRX86_05560 PF00501 AMP-binding enzyme LRX86_05560 PF13193 AMP-binding enzyme C-terminal domain LRX86_05565 PF00857 Isochorismatase family LRX86_05565 PF00550 Phosphopantetheine attachment site LRX86_05570 PF00282 Pyridoxal-dependent decarboxylase conserved domain LRX86_05580 PF00664 ABC transporter transmembrane region LRX86_05580 PF00005 ABC transporter LRX86_05585 PF00005 ABC transporter LRX86_05590 PF00975 Thioesterase domain LRX86_05600 PF00425 chorismate binding enzyme LRX86_05610 PF01208 Uroporphyrinogen decarboxylase (URO-D) LRX86_05615 PF05675 Protein of unknown function (DUF817) LRX86_05630 PF00144 Beta-lactamase LRX86_05635 PF01227 GTP cyclohydrolase I LRX86_05640 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_05640 PF01799 [2Fe-2S] binding domain LRX86_05645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LRX86_05645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LRX86_05660 PF00218 Indole-3-glycerol phosphate synthase LRX86_05665 PF02885 Glycosyl transferase family, helical bundle domain LRX86_05665 PF00591 Glycosyl transferase family, a/b domain LRX86_05670 PF00593 TonB dependent receptor LRX86_05670 PF07715 TonB-dependent Receptor Plug Domain LRX86_05675 PF01433 Peptidase family M1 domain LRX86_05675 PF11838 ERAP1-like C-terminal domain LRX86_05680 PF00117 Glutamine amidotransferase class-I LRX86_05690 PF00854 POT family LRX86_05695 PF00120 Glutamine synthetase, catalytic domain LRX86_05695 PF03951 Glutamine synthetase, beta-Grasp domain LRX86_05700 PF04345 Chorismate lyase LRX86_05705 PF01040 UbiA prenyltransferase family LRX86_05740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LRX86_05740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LRX86_05745 PF01784 NIF3 (NGG1p interacting factor 3) LRX86_05750 PF13180 PDZ domain LRX86_05755 PF01743 Poly A polymerase head domain LRX86_05755 PF12627 Probable RNA and SrmB- binding site of polymerase A LRX86_05760 PF00390 Malic enzyme, N-terminal domain LRX86_05760 PF03949 Malic enzyme, NAD binding domain LRX86_05760 PF01515 Phosphate acetyl/butaryl transferase LRX86_05765 PF00563 EAL domain LRX86_05765 PF00990 Diguanylate cyclase, GGDEF domain LRX86_05765 PF03707 Bacterial signalling protein N terminal repeat LRX86_05770 PF04452 RNA methyltransferase LRX86_05775 PF02219 Methylenetetrahydrofolate reductase LRX86_05780 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LRX86_05780 PF05221 S-adenosyl-L-homocysteine hydrolase LRX86_05795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_05795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_05795 PF09317 Domain of unknown function (DUF1974) LRX86_05800 PF04055 Radical SAM superfamily LRX86_05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_05805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRX86_05815 PF07690 Major Facilitator Superfamily LRX86_05825 PF00557 Metallopeptidase family M24 LRX86_05830 PF00318 Ribosomal protein S2 LRX86_05835 PF00889 Elongation factor TS LRX86_05845 PF12833 Helix-turn-helix domain LRX86_05865 PF05036 Sporulation related domain LRX86_05865 PF03330 Lytic transglycolase LRX86_05870 PF13406 Transglycosylase SLT domain LRX86_05875 PF01098 Cell cycle protein LRX86_05885 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LRX86_05885 PF14489 QueF-like protein LRX86_05890 PF01061 ABC-2 type transporter LRX86_05895 PF00005 ABC transporter LRX86_05920 PF00905 Penicillin binding protein transpeptidase domain LRX86_05930 PF00589 Phage integrase family LRX86_05965 PF12684 PDDEXK-like domain of unknown function (DUF3799) LRX86_05965 PF06630 Enterobacterial exodeoxyribonuclease VIII LRX86_06045 PF03796 DnaB-like helicase C terminal domain LRX86_06045 PF00772 DnaB-like helicase N terminal domain LRX86_06260 PF00464 Serine hydroxymethyltransferase LRX86_06265 PF02321 Outer membrane efflux protein LRX86_06270 PF00873 AcrB/AcrD/AcrF family LRX86_06275 PF13533 Biotin-lipoyl like LRX86_06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_06280 PF03466 LysR substrate binding domain LRX86_06285 PF00893 Small Multidrug Resistance protein LRX86_06290 PF00037 4Fe-4S binding domain LRX86_06295 PF01136 Peptidase family U32 LRX86_06295 PF16325 Peptidase family U32 C-terminal domain LRX86_06300 PF00155 Aminotransferase class I and II LRX86_06300 PF00392 Bacterial regulatory proteins, gntR family LRX86_06305 PF02567 Phenazine biosynthesis-like protein LRX86_06310 PF00970 Oxidoreductase FAD-binding domain LRX86_06310 PF00175 Oxidoreductase NAD-binding domain LRX86_06315 PF01980 tRNA-methyltransferase O LRX86_06315 PF18389 TrmO C-terminal domain LRX86_06325 PF00437 Type II/IV secretion system protein LRX86_06325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LRX86_06335 PF00486 Transcriptional regulatory protein, C terminal LRX86_06335 PF00072 Response regulator receiver domain LRX86_06340 PF08521 Two-component sensor kinase N-terminal LRX86_06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_06340 PF00512 His Kinase A (phospho-acceptor) domain LRX86_06350 PF00293 NUDIX domain LRX86_06360 PF14814 Bifunctional transglycosylase second domain LRX86_06360 PF00905 Penicillin binding protein transpeptidase domain LRX86_06360 PF00912 Transglycosylase LRX86_06365 PF01513 ATP-NAD kinase LRX86_06370 PF07023 Protein of unknown function (DUF1315) LRX86_06375 PF02885 Glycosyl transferase family, helical bundle domain LRX86_06375 PF00591 Glycosyl transferase family, a/b domain LRX86_06380 PF00375 Sodium:dicarboxylate symporter family LRX86_06385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_06385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_06385 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_06390 PF00756 Putative esterase LRX86_06395 PF01842 ACT domain LRX86_06395 PF00800 Prephenate dehydratase LRX86_06395 PF01817 Chorismate mutase type II LRX86_06400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRX86_06410 PF01546 Peptidase family M20/M25/M40 LRX86_06410 PF07687 Peptidase dimerisation domain LRX86_06415 PF00753 Metallo-beta-lactamase superfamily LRX86_06425 PF03883 Peroxide stress protein YaaA LRX86_06435 PF05690 Thiazole biosynthesis protein ThiG LRX86_06445 PF04241 Protein of unknown function (DUF423) LRX86_06450 PF00140 Sigma-70 factor, region 1.2 LRX86_06450 PF04542 Sigma-70 region 2 LRX86_06450 PF04545 Sigma-70, region 4 LRX86_06465 PF00313 'Cold-shock' DNA-binding domain LRX86_06470 PF00270 DEAD/DEAH box helicase LRX86_06470 PF00271 Helicase conserved C-terminal domain LRX86_06480 PF00881 Nitroreductase family LRX86_06485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LRX86_06485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LRX86_06505 PF01180 Dihydroorotate dehydrogenase LRX86_06510 PF02674 Colicin V production protein LRX86_06515 PF00156 Phosphoribosyl transferase domain LRX86_06530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRX86_06530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRX86_06535 PF01435 Peptidase family M48 LRX86_06540 PF09424 Yqey-like protein LRX86_06545 PF01165 Ribosomal protein S21 LRX86_06550 PF00814 Glycoprotease family LRX86_06570 PF00069 Protein kinase domain LRX86_06595 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LRX86_06595 PF08479 POTRA domain, ShlB-type LRX86_06595 PF17287 POTRA domain LRX86_06600 PF04829 Pre-toxin domain with VENN motif LRX86_06600 PF05860 haemagglutination activity domain LRX86_06600 PF13018 Extended Signal Peptide of Type V secretion system LRX86_06600 PF04829 Pre-toxin domain with VENN motif LRX86_06600 PF13332 Hemagglutinin repeat LRX86_06600 PF13332 Hemagglutinin repeat LRX86_06600 PF13018 Extended Signal Peptide of Type V secretion system LRX86_06600 PF05860 haemagglutination activity domain LRX86_06625 PF03466 LysR substrate binding domain LRX86_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_06630 PF00202 Aminotransferase class-III LRX86_06635 PF00171 Aldehyde dehydrogenase family LRX86_06640 PF00324 Amino acid permease LRX86_06670 PF04076 Bacterial OB fold (BOF) protein LRX86_06695 PF00561 alpha/beta hydrolase fold LRX86_06700 PF03616 Sodium/glutamate symporter LRX86_06710 PF07729 FCD domain LRX86_06710 PF00392 Bacterial regulatory proteins, gntR family LRX86_06760 PF08946 Osmosensory transporter coiled coil LRX86_06760 PF00083 Sugar (and other) transporter LRX86_06785 PF04403 Paraquat-inducible protein A LRX86_06790 PF02470 MlaD protein LRX86_06800 PF00576 HIUase/Transthyretin family LRX86_06810 PF00486 Transcriptional regulatory protein, C terminal LRX86_06810 PF00072 Response regulator receiver domain LRX86_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_06815 PF00672 HAMP domain LRX86_06815 PF00512 His Kinase A (phospho-acceptor) domain LRX86_06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_06855 PF00512 His Kinase A (phospho-acceptor) domain LRX86_06855 PF08521 Two-component sensor kinase N-terminal LRX86_06860 PF00072 Response regulator receiver domain LRX86_06860 PF00486 Transcriptional regulatory protein, C terminal LRX86_06880 PF01177 Asp/Glu/Hydantoin racemase LRX86_06900 PF07995 Glucose / Sorbosone dehydrogenase LRX86_06920 PF00375 Sodium:dicarboxylate symporter family LRX86_06930 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRX86_06930 PF00753 Metallo-beta-lactamase superfamily LRX86_06935 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_06940 PF00005 ABC transporter LRX86_06940 PF09383 NIL domain LRX86_06945 PF03180 NLPA lipoprotein LRX86_06950 PF02844 Phosphoribosylglycinamide synthetase, N domain LRX86_06950 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LRX86_06950 PF02843 Phosphoribosylglycinamide synthetase, C domain LRX86_06955 PF01808 AICARFT/IMPCHase bienzyme LRX86_06955 PF02142 MGS-like domain LRX86_06960 PF02954 Bacterial regulatory protein, Fis family LRX86_06980 PF01134 Glucose inhibited division protein A LRX86_06980 PF13932 GidA associated domain LRX86_06990 PF14403 Circularly permuted ATP-grasp type 2 LRX86_07000 PF08379 Bacterial transglutaminase-like N-terminal region LRX86_07000 PF01841 Transglutaminase-like superfamily LRX86_07010 PF00842 Alanine racemase, C-terminal domain LRX86_07010 PF01168 Alanine racemase, N-terminal domain LRX86_07015 PF00772 DnaB-like helicase N terminal domain LRX86_07015 PF03796 DnaB-like helicase C terminal domain LRX86_07020 PF01281 Ribosomal protein L9, N-terminal domain LRX86_07020 PF03948 Ribosomal protein L9, C-terminal domain LRX86_07025 PF01084 Ribosomal protein S18 LRX86_07030 PF01250 Ribosomal protein S6 LRX86_07035 PF01040 UbiA prenyltransferase family LRX86_07040 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LRX86_07045 PF00510 Cytochrome c oxidase subunit III LRX86_07050 PF00115 Cytochrome C and Quinol oxidase polypeptide I LRX86_07055 PF06481 COX Aromatic Rich Motif LRX86_07055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LRX86_07065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LRX86_07065 PF02896 PEP-utilising enzyme, TIM barrel domain LRX86_07065 PF00391 PEP-utilising enzyme, mobile domain LRX86_07070 PF03618 Kinase/pyrophosphorylase LRX86_07080 PF01522 Polysaccharide deacetylase LRX86_07080 PF14883 Hypothetical glycosyl hydrolase family 13 LRX86_07085 PF00535 Glycosyl transferase family 2 LRX86_07090 PF13994 PgaD-like protein LRX86_07100 PF00296 Luciferase-like monooxygenase LRX86_07115 PF03466 LysR substrate binding domain LRX86_07115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_07125 PF03462 PCRF domain LRX86_07125 PF00472 RF-1 domain LRX86_07130 PF13847 Methyltransferase domain LRX86_07130 PF17827 PrmC N-terminal domain LRX86_07135 PF12833 Helix-turn-helix domain LRX86_07140 PF00106 short chain dehydrogenase LRX86_07145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_07145 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_07145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_07150 PF00501 AMP-binding enzyme LRX86_07150 PF13193 AMP-binding enzyme C-terminal domain LRX86_07155 PF01613 Flavin reductase like domain LRX86_07160 PF00899 ThiF family LRX86_07165 PF03109 ABC1 family LRX86_07180 PF03814 Potassium-transporting ATPase A subunit LRX86_07190 PF02669 K+-transporting ATPase, c chain LRX86_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_07195 PF00512 His Kinase A (phospho-acceptor) domain LRX86_07195 PF02702 Osmosensitive K+ channel His kinase sensor domain LRX86_07195 PF13493 Domain of unknown function (DUF4118) LRX86_07200 PF00072 Response regulator receiver domain LRX86_07200 PF00486 Transcriptional regulatory protein, C terminal LRX86_07205 PF00120 Glutamine synthetase, catalytic domain LRX86_07215 PF03232 Ubiquinone biosynthesis protein COQ7 LRX86_07220 PF07690 Major Facilitator Superfamily LRX86_07225 PF01103 Surface antigen LRX86_07225 PF07244 Surface antigen variable number repeat LRX86_07225 PF17243 POTRA domain TamA domain 1 LRX86_07240 PF00330 Aconitase family (aconitate hydratase) LRX86_07240 PF11791 Aconitate B N-terminal domain LRX86_07240 PF06434 Aconitate hydratase 2 N-terminus LRX86_07250 PF00027 Cyclic nucleotide-binding domain LRX86_07250 PF00520 Ion transport protein LRX86_07255 PF07690 Major Facilitator Superfamily LRX86_07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_07270 PF03466 LysR substrate binding domain LRX86_07275 PF04284 Protein of unknown function (DUF441) LRX86_07285 PF00849 RNA pseudouridylate synthase LRX86_07285 PF01479 S4 domain LRX86_07300 PF00849 RNA pseudouridylate synthase LRX86_07300 PF01479 S4 domain LRX86_07305 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LRX86_07310 PF08676 MutL C terminal dimerisation domain LRX86_07310 PF01119 DNA mismatch repair protein, C-terminal domain LRX86_07320 PF17209 Hfq protein LRX86_07330 PF00881 Nitroreductase family LRX86_07335 PF00149 Calcineurin-like phosphoesterase LRX86_07340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRX86_07345 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRX86_07345 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LRX86_07350 PF00117 Glutamine amidotransferase class-I LRX86_07350 PF00958 GMP synthase C terminal domain LRX86_07350 PF02540 NAD synthase LRX86_07355 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LRX86_07360 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LRX86_07365 PF13520 Amino acid permease LRX86_07370 PF00171 Aldehyde dehydrogenase family LRX86_07385 PF00465 Iron-containing alcohol dehydrogenase LRX86_07390 PF14493 Helix-turn-helix domain LRX86_07390 PF05970 PIF1-like helicase LRX86_07400 PF02110 Hydroxyethylthiazole kinase family LRX86_07415 PF11940 Domain of unknown function (DUF3458) Ig-like fold LRX86_07415 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LRX86_07415 PF01433 Peptidase family M1 domain LRX86_07430 PF00577 Outer membrane usher protein LRX86_07430 PF13953 PapC C-terminal domain LRX86_07430 PF13954 PapC N-terminal domain LRX86_07455 PF01817 Chorismate mutase type II LRX86_07460 PF01037 Lrp/AsnC ligand binding domain LRX86_07475 PF00440 Bacterial regulatory proteins, tetR family LRX86_07480 PF07715 TonB-dependent Receptor Plug Domain LRX86_07480 PF00593 TonB dependent receptor LRX86_07485 PF00924 Mechanosensitive ion channel LRX86_07515 PF07715 TonB-dependent Receptor Plug Domain LRX86_07515 PF00593 TonB dependent receptor LRX86_07535 PF12848 ABC transporter LRX86_07535 PF00005 ABC transporter LRX86_07540 PF00582 Universal stress protein family LRX86_07565 PF00690 Cation transporter/ATPase, N-terminus LRX86_07565 PF00689 Cation transporting ATPase, C-terminus LRX86_07570 PF02308 MgtC family LRX86_07590 PF01037 Lrp/AsnC ligand binding domain LRX86_07595 PF01810 LysE type translocator LRX86_07600 PF00923 Transaldolase/Fructose-6-phosphate aldolase LRX86_07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_07605 PF03466 LysR substrate binding domain LRX86_07615 PF02803 Thiolase, C-terminal domain LRX86_07615 PF00108 Thiolase, N-terminal domain LRX86_07625 PF01575 MaoC like domain LRX86_07630 PF00144 Beta-lactamase LRX86_07640 PF07690 Major Facilitator Superfamily LRX86_07645 PF12169 DNA polymerase III subunits gamma and tau domain III LRX86_07645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LRX86_07645 PF12170 DNA polymerase III tau subunit V interacting with alpha LRX86_07650 PF04185 Phosphoesterase family LRX86_07650 PF05506 Domain of unknown function (DUF756) LRX86_07655 PF03061 Thioesterase superfamily LRX86_07660 PF00465 Iron-containing alcohol dehydrogenase LRX86_07670 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRX86_07675 PF01565 FAD binding domain LRX86_07675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LRX86_07690 PF01645 Conserved region in glutamate synthase LRX86_07710 PF12832 MFS_1 like family LRX86_07720 PF02785 Biotin carboxylase C-terminal domain LRX86_07720 PF00289 Biotin carboxylase, N-terminal domain LRX86_07720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRX86_07725 PF00364 Biotin-requiring enzyme LRX86_07730 PF01220 Dehydroquinase class II LRX86_07735 PF11799 impB/mucB/samB family C-terminal domain LRX86_07735 PF00817 impB/mucB/samB family LRX86_07735 PF13438 Domain of unknown function (DUF4113) LRX86_07745 PF00005 ABC transporter LRX86_07750 PF00072 Response regulator receiver domain LRX86_07750 PF00486 Transcriptional regulatory protein, C terminal LRX86_07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_07760 PF13806 Rieske-like [2Fe-2S] domain LRX86_07760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRX86_07760 PF04324 BFD-like [2Fe-2S] binding domain LRX86_07760 PF18267 Rubredoxin NAD+ reductase C-terminal domain LRX86_07760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRX86_07765 PF18267 Rubredoxin NAD+ reductase C-terminal domain LRX86_07765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRX86_07765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRX86_07765 PF04324 BFD-like [2Fe-2S] binding domain LRX86_07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_07770 PF01568 Molydopterin dinucleotide binding domain LRX86_07770 PF00384 Molybdopterin oxidoreductase LRX86_07770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRX86_07770 PF04324 BFD-like [2Fe-2S] binding domain LRX86_07775 PF12804 MobA-like NTP transferase domain LRX86_07780 PF00384 Molybdopterin oxidoreductase LRX86_07780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRX86_07780 PF01568 Molydopterin dinucleotide binding domain LRX86_07785 PF06463 Molybdenum Cofactor Synthesis C LRX86_07785 PF04055 Radical SAM superfamily LRX86_07795 PF02391 MoaE protein LRX86_07800 PF01967 MoaC family LRX86_07800 PF00994 Probable molybdopterin binding domain LRX86_07805 PF03453 MoeA N-terminal region (domain I and II) LRX86_07805 PF00994 Probable molybdopterin binding domain LRX86_07805 PF03454 MoeA C-terminal region (domain IV) LRX86_07810 PF01638 HxlR-like helix-turn-helix LRX86_07815 PF00392 Bacterial regulatory proteins, gntR family LRX86_07815 PF00155 Aminotransferase class I and II LRX86_07820 PF00892 EamA-like transporter family LRX86_07840 PF02635 DsrE/DsrF-like family LRX86_07845 PF16363 GDP-mannose 4,6 dehydratase LRX86_07850 PF10415 Fumarase C C-terminus LRX86_07850 PF00206 Lyase LRX86_07870 PF01266 FAD dependent oxidoreductase LRX86_07880 PF02542 YgbB family LRX86_07890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRX86_07890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRX86_07895 PF00440 Bacterial regulatory proteins, tetR family LRX86_07900 PF00158 Sigma-54 interaction domain LRX86_07900 PF00072 Response regulator receiver domain LRX86_07900 PF02954 Bacterial regulatory protein, Fis family LRX86_07905 PF00512 His Kinase A (phospho-acceptor) domain LRX86_07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_07905 PF00989 PAS fold LRX86_07910 PF00919 Uncharacterized protein family UPF0004 LRX86_07910 PF18693 TRAM domain LRX86_07910 PF04055 Radical SAM superfamily LRX86_07915 PF00696 Amino acid kinase family LRX86_07920 PF01765 Ribosome recycling factor LRX86_07925 PF01255 Putative undecaprenyl diphosphate synthase LRX86_07935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LRX86_07935 PF13288 DXP reductoisomerase C-terminal domain LRX86_07935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LRX86_07940 PF02163 Peptidase family M50 LRX86_07940 PF17820 PDZ domain LRX86_07940 PF13180 PDZ domain LRX86_07945 PF07244 Surface antigen variable number repeat LRX86_07945 PF01103 Surface antigen LRX86_07955 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_07955 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LRX86_07960 PF07977 FabA-like domain LRX86_07965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LRX86_07965 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_07980 PF02631 RecX family LRX86_07985 PF00154 recA bacterial DNA recombination protein LRX86_07990 PF01479 S4 domain LRX86_08020 PF01037 Lrp/AsnC ligand binding domain LRX86_08025 PF00266 Aminotransferase class-V LRX86_08030 PF00324 Amino acid permease LRX86_08045 PF00082 Subtilase family LRX86_08045 PF05922 Peptidase inhibitor I9 LRX86_08050 PF01740 STAS domain LRX86_08050 PF00916 Sulfate permease family LRX86_08055 PF02586 SOS response associated peptidase (SRAP) LRX86_08060 PF07995 Glucose / Sorbosone dehydrogenase LRX86_08070 PF00563 EAL domain LRX86_08070 PF00990 Diguanylate cyclase, GGDEF domain LRX86_08070 PF03707 Bacterial signalling protein N terminal repeat LRX86_08085 PF02378 Phosphotransferase system, EIIC LRX86_08085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRX86_08090 PF00294 pfkB family carbohydrate kinase LRX86_08095 PF00391 PEP-utilising enzyme, mobile domain LRX86_08095 PF02896 PEP-utilising enzyme, TIM barrel domain LRX86_08095 PF00381 PTS HPr component phosphorylation site LRX86_08095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LRX86_08095 PF05524 PEP-utilising enzyme, N-terminal LRX86_08120 PF05525 Branched-chain amino acid transport protein LRX86_08125 PF00557 Metallopeptidase family M24 LRX86_08130 PF03466 LysR substrate binding domain LRX86_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08140 PF00462 Glutaredoxin LRX86_08145 PF00202 Aminotransferase class-III LRX86_08150 PF00478 IMP dehydrogenase / GMP reductase domain LRX86_08150 PF00571 CBS domain LRX86_08175 PF00448 SRP54-type protein, GTPase domain LRX86_08175 PF02881 SRP54-type protein, helical bundle domain LRX86_08185 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LRX86_08195 PF08173 Membrane bound YbgT-like protein LRX86_08200 PF02322 Cytochrome bd terminal oxidase subunit II LRX86_08205 PF01654 Cytochrome bd terminal oxidase subunit I LRX86_08215 PF07290 Protein of unknown function (DUF1449) LRX86_08225 PF00294 pfkB family carbohydrate kinase LRX86_08230 PF00593 TonB dependent receptor LRX86_08230 PF07715 TonB-dependent Receptor Plug Domain LRX86_08235 PF08367 Peptidase M16C associated LRX86_08235 PF00675 Insulinase (Peptidase family M16) LRX86_08235 PF05193 Peptidase M16 inactive domain LRX86_08240 PF02253 Phospholipase A1 LRX86_08245 PF02386 Cation transport protein LRX86_08250 PF02254 TrkA-N domain LRX86_08250 PF02080 TrkA-C domain LRX86_08255 PF00585 C-terminal regulatory domain of Threonine dehydratase LRX86_08255 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_08260 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LRX86_08275 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRX86_08275 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRX86_08285 PF02617 ATP-dependent Clp protease adaptor protein ClpS LRX86_08290 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_08290 PF07724 AAA domain (Cdc48 subfamily) LRX86_08290 PF17871 AAA lid domain LRX86_08290 PF02861 Clp amino terminal domain, pathogenicity island component LRX86_08290 PF10431 C-terminal, D2-small domain, of ClpB protein LRX86_08295 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LRX86_08300 PF00793 DAHP synthetase I family LRX86_08315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_08345 PF00117 Glutamine amidotransferase class-I LRX86_08345 PF06418 CTP synthase N-terminus LRX86_08350 PF00793 DAHP synthetase I family LRX86_08355 PF00113 Enolase, C-terminal TIM barrel domain LRX86_08355 PF03952 Enolase, N-terminal domain LRX86_08360 PF04239 Protein of unknown function (DUF421) LRX86_08365 PF04977 Septum formation initiator LRX86_08370 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LRX86_08375 PF01144 Coenzyme A transferase LRX86_08380 PF01144 Coenzyme A transferase LRX86_08385 PF00108 Thiolase, N-terminal domain LRX86_08385 PF02803 Thiolase, C-terminal domain LRX86_08390 PF00206 Lyase LRX86_08390 PF10397 Adenylosuccinate lyase C-terminus LRX86_08395 PF00561 alpha/beta hydrolase fold LRX86_08400 PF07690 Major Facilitator Superfamily LRX86_08405 PF02627 Carboxymuconolactone decarboxylase family LRX86_08410 PF00775 Dioxygenase LRX86_08410 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LRX86_08415 PF00775 Dioxygenase LRX86_08420 PF01487 Type I 3-dehydroquinase LRX86_08425 PF05048 Periplasmic copper-binding protein (NosD) LRX86_08430 PF04966 Carbohydrate-selective porin, OprB family LRX86_08435 PF13360 PQQ-like domain LRX86_08435 PF01011 PQQ enzyme repeat LRX86_08445 PF04143 Sulphur transport LRX86_08455 PF00753 Metallo-beta-lactamase superfamily LRX86_08460 PF01614 Bacterial transcriptional regulator LRX86_08460 PF09339 IclR helix-turn-helix domain LRX86_08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08465 PF03466 LysR substrate binding domain LRX86_08470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_08470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_08470 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_08485 PF00106 short chain dehydrogenase LRX86_08495 PF07690 Major Facilitator Superfamily LRX86_08505 PF01425 Amidase LRX86_08510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRX86_08525 PF00355 Rieske [2Fe-2S] domain LRX86_08525 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRX86_08540 PF00175 Oxidoreductase NAD-binding domain LRX86_08540 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_08545 PF01613 Flavin reductase like domain LRX86_08550 PF12833 Helix-turn-helix domain LRX86_08550 PF02311 AraC-like ligand binding domain LRX86_08555 PF01179 Copper amine oxidase, enzyme domain LRX86_08555 PF07833 Copper amine oxidase N-terminal domain LRX86_08555 PF02727 Copper amine oxidase, N2 domain LRX86_08555 PF02728 Copper amine oxidase, N3 domain LRX86_08565 PF00171 Aldehyde dehydrogenase family LRX86_08570 PF01804 Penicillin amidase LRX86_08575 PF12146 Serine aminopeptidase, S33 LRX86_08580 PF00108 Thiolase, N-terminal domain LRX86_08580 PF02803 Thiolase, C-terminal domain LRX86_08585 PF01144 Coenzyme A transferase LRX86_08590 PF01144 Coenzyme A transferase LRX86_08595 PF00775 Dioxygenase LRX86_08595 PF04444 Catechol dioxygenase N terminus LRX86_08600 PF02426 Muconolactone delta-isomerase LRX86_08605 PF13378 Enolase C-terminal domain-like LRX86_08605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LRX86_08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08610 PF03466 LysR substrate binding domain LRX86_08620 PF07729 FCD domain LRX86_08620 PF00392 Bacterial regulatory proteins, gntR family LRX86_08625 PF00920 Dehydratase family LRX86_08630 PF07690 Major Facilitator Superfamily LRX86_08640 PF00171 Aldehyde dehydrogenase family LRX86_08650 PF00561 alpha/beta hydrolase fold LRX86_08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_08655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_08670 PF13411 MerR HTH family regulatory protein LRX86_08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_08690 PF12706 Beta-lactamase superfamily domain LRX86_08695 PF00440 Bacterial regulatory proteins, tetR family LRX86_08695 PF08359 YsiA-like protein, C-terminal region LRX86_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08735 PF03466 LysR substrate binding domain LRX86_08740 PF02525 Flavodoxin-like fold LRX86_08745 PF07681 DoxX LRX86_08750 PF00043 Glutathione S-transferase, C-terminal domain LRX86_08750 PF02798 Glutathione S-transferase, N-terminal domain LRX86_08755 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_08755 PF00107 Zinc-binding dehydrogenase LRX86_08760 PF01638 HxlR-like helix-turn-helix LRX86_08765 PF13360 PQQ-like domain LRX86_08790 PF07690 Major Facilitator Superfamily LRX86_08795 PF04909 Amidohydrolase LRX86_08805 PF00392 Bacterial regulatory proteins, gntR family LRX86_08805 PF07702 UTRA domain LRX86_08810 PF08450 SMP-30/Gluconolactonase/LRE-like region LRX86_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08820 PF03466 LysR substrate binding domain LRX86_08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_08835 PF00529 HlyD membrane-fusion protein of T1SS LRX86_08850 PF00171 Aldehyde dehydrogenase family LRX86_08855 PF00920 Dehydratase family LRX86_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_08865 PF03466 LysR substrate binding domain LRX86_08870 PF01370 NAD dependent epimerase/dehydratase family LRX86_08875 PF07690 Major Facilitator Superfamily LRX86_08880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRX86_08880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRX86_08885 PF06719 AraC-type transcriptional regulator N-terminus LRX86_08885 PF12833 Helix-turn-helix domain LRX86_08895 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_08895 PF00107 Zinc-binding dehydrogenase LRX86_08905 PF01032 FecCD transport family LRX86_08910 PF00005 ABC transporter LRX86_08930 PF14572 Phosphoribosyl synthetase-associated domain LRX86_08930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LRX86_08935 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LRX86_08950 PF13533 Biotin-lipoyl like LRX86_08955 PF07690 Major Facilitator Superfamily LRX86_08980 PF01975 Survival protein SurE LRX86_08990 PF02824 TGS domain LRX86_08990 PF13291 ACT domain LRX86_08990 PF04607 Region found in RelA / SpoT proteins LRX86_09060 PF12146 Serine aminopeptidase, S33 LRX86_09065 PF02311 AraC-like ligand binding domain LRX86_09065 PF12833 Helix-turn-helix domain LRX86_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_09075 PF16527 Two-component sensor protein CpxA, periplasmic domain LRX86_09075 PF00672 HAMP domain LRX86_09075 PF00512 His Kinase A (phospho-acceptor) domain LRX86_09080 PF00486 Transcriptional regulatory protein, C terminal LRX86_09080 PF00072 Response regulator receiver domain LRX86_09090 PF00529 HlyD membrane-fusion protein of T1SS LRX86_09090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_09095 PF00873 AcrB/AcrD/AcrF family LRX86_09100 PF17760 UvrA interaction domain LRX86_09100 PF00005 ABC transporter LRX86_09100 PF17755 UvrA DNA-binding domain LRX86_09110 PF16970 Type-1 fimbrial protein, A LRX86_09115 PF02753 Pili assembly chaperone PapD, C-terminal domain LRX86_09115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LRX86_09120 PF13953 PapC C-terminal domain LRX86_09120 PF00577 Outer membrane usher protein LRX86_09120 PF13954 PapC N-terminal domain LRX86_09135 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_09135 PF00107 Zinc-binding dehydrogenase LRX86_09145 PF00199 Catalase LRX86_09160 PF13091 PLD-like domain LRX86_09180 PF01244 Membrane dipeptidase (Peptidase family M19) LRX86_09185 PF04055 Radical SAM superfamily LRX86_09185 PF13186 Iron-sulfur cluster-binding domain LRX86_09190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LRX86_09195 PF03070 TENA/THI-4/PQQC family LRX86_09200 PF12706 Beta-lactamase superfamily domain LRX86_09205 PF08042 PqqA family LRX86_09210 PF02503 Polyphosphate kinase middle domain LRX86_09210 PF17941 Polyphosphate kinase C-terminal domain 1 LRX86_09210 PF13089 Polyphosphate kinase N-terminal domain LRX86_09210 PF13090 Polyphosphate kinase C-terminal domain 2 LRX86_09215 PF00149 Calcineurin-like phosphoesterase LRX86_09225 PF00550 Phosphopantetheine attachment site LRX86_09225 PF00857 Isochorismatase family LRX86_09230 PF00106 short chain dehydrogenase LRX86_09235 PF00005 ABC transporter LRX86_09235 PF03459 TOBE domain LRX86_09240 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_09250 PF03459 TOBE domain LRX86_09255 PF00355 Rieske [2Fe-2S] domain LRX86_09255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRX86_09260 PF00866 Ring hydroxylating beta subunit LRX86_09265 PF00175 Oxidoreductase NAD-binding domain LRX86_09265 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_09265 PF00970 Oxidoreductase FAD-binding domain LRX86_09270 PF14525 AraC-binding-like domain LRX86_09270 PF12833 Helix-turn-helix domain LRX86_09280 PF01613 Flavin reductase like domain LRX86_09295 PF01738 Dienelactone hydrolase family LRX86_09300 PF07690 Major Facilitator Superfamily LRX86_09305 PF12833 Helix-turn-helix domain LRX86_09305 PF06719 AraC-type transcriptional regulator N-terminus LRX86_09325 PF00440 Bacterial regulatory proteins, tetR family LRX86_09345 PF03466 LysR substrate binding domain LRX86_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_09350 PF01144 Coenzyme A transferase LRX86_09355 PF01144 Coenzyme A transferase LRX86_09360 PF02667 Short chain fatty acid transporter LRX86_09365 PF02803 Thiolase, C-terminal domain LRX86_09365 PF00108 Thiolase, N-terminal domain LRX86_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_09370 PF03466 LysR substrate binding domain LRX86_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_09375 PF03466 LysR substrate binding domain LRX86_09390 PF10415 Fumarase C C-terminus LRX86_09390 PF00206 Lyase LRX86_09395 PF00593 TonB dependent receptor LRX86_09395 PF07715 TonB-dependent Receptor Plug Domain LRX86_09400 PF00083 Sugar (and other) transporter LRX86_09415 PF00005 ABC transporter LRX86_09420 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_09425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRX86_09440 PF07702 UTRA domain LRX86_09440 PF00392 Bacterial regulatory proteins, gntR family LRX86_09445 PF02417 Chromate transporter LRX86_09450 PF02525 Flavodoxin-like fold LRX86_09455 PF01638 HxlR-like helix-turn-helix LRX86_09460 PF06445 GyrI-like small molecule binding domain LRX86_09460 PF12833 Helix-turn-helix domain LRX86_09475 PF01925 Sulfite exporter TauE/SafE LRX86_09490 PF00753 Metallo-beta-lactamase superfamily LRX86_09490 PF04273 Putative phosphatase (DUF442) LRX86_09495 PF00158 Sigma-54 interaction domain LRX86_09495 PF02954 Bacterial regulatory protein, Fis family LRX86_09495 PF00072 Response regulator receiver domain LRX86_09500 PF01062 Bestrophin, RFP-TM, chloride channel LRX86_09505 PF00107 Zinc-binding dehydrogenase LRX86_09505 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_09510 PF00106 short chain dehydrogenase LRX86_09515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRX86_09515 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_09520 PF02817 e3 binding domain LRX86_09520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRX86_09520 PF00364 Biotin-requiring enzyme LRX86_09525 PF02779 Transketolase, pyrimidine binding domain LRX86_09525 PF02780 Transketolase, C-terminal domain LRX86_09530 PF00676 Dehydrogenase E1 component LRX86_09535 PF04055 Radical SAM superfamily LRX86_09550 PF00990 Diguanylate cyclase, GGDEF domain LRX86_09550 PF08448 PAS fold LRX86_09555 PF01264 Chorismate synthase LRX86_09560 PF05175 Methyltransferase small domain LRX86_09565 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_09575 PF01434 Peptidase family M41 LRX86_09575 PF17862 AAA+ lid domain LRX86_09575 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_09585 PF05166 YcgL domain LRX86_09605 PF00570 HRDC domain LRX86_09605 PF01612 3'-5' exonuclease LRX86_09610 PF13662 Toprim domain LRX86_09610 PF02132 RecR protein LRX86_09615 PF02575 YbaB/EbfC DNA-binding family LRX86_09625 PF01053 Cys/Met metabolism PLP-dependent enzyme LRX86_09630 PF00561 alpha/beta hydrolase fold LRX86_09635 PF08241 Methyltransferase domain LRX86_09665 PF01230 HIT domain LRX86_09700 PF00005 ABC transporter LRX86_09705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_09715 PF02684 Lipid-A-disaccharide synthetase LRX86_09750 PF01925 Sulfite exporter TauE/SafE LRX86_09755 PF00793 DAHP synthetase I family LRX86_09760 PF02654 Cobalamin-5-phosphate synthase LRX86_09775 PF02277 Phosphoribosyltransferase LRX86_09780 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LRX86_09790 PF13419 Haloacid dehalogenase-like hydrolase LRX86_09815 PF00593 TonB dependent receptor LRX86_09815 PF07715 TonB-dependent Receptor Plug Domain LRX86_09820 PF03737 Aldolase/RraA LRX86_09830 PF06276 Ferric iron reductase FhuF-like transporter LRX86_09830 PF04183 IucA / IucC family LRX86_09835 PF06276 Ferric iron reductase FhuF-like transporter LRX86_09835 PF04183 IucA / IucC family LRX86_09840 PF07690 Major Facilitator Superfamily LRX86_09845 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LRX86_09850 PF06276 Ferric iron reductase FhuF-like transporter LRX86_09850 PF04183 IucA / IucC family LRX86_09855 PF04073 Aminoacyl-tRNA editing domain LRX86_09865 PF03109 ABC1 family LRX86_09900 PF00487 Fatty acid desaturase LRX86_09905 PF12833 Helix-turn-helix domain LRX86_09905 PF12852 Cupin LRX86_09910 PF09312 SurA N-terminal domain LRX86_09910 PF00639 PPIC-type PPIASE domain LRX86_09915 PF00216 Bacterial DNA-binding protein LRX86_09930 PF02082 Transcriptional regulator LRX86_09935 PF00266 Aminotransferase class-V LRX86_09940 PF01592 NifU-like N terminal domain LRX86_09945 PF01521 Iron-sulphur cluster biosynthesis LRX86_09950 PF07743 HSCB C-terminal oligomerisation domain LRX86_09950 PF00226 DnaJ domain LRX86_09955 PF00012 Hsp70 protein LRX86_09960 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_09965 PF00211 Adenylate and Guanylate cyclase catalytic domain LRX86_09975 PF02559 CarD-like/TRCF domain LRX86_09975 PF17757 UvrB interaction domain LRX86_09975 PF03461 TRCF domain LRX86_09975 PF00271 Helicase conserved C-terminal domain LRX86_09975 PF00270 DEAD/DEAH box helicase LRX86_09995 PF03737 Aldolase/RraA LRX86_10000 PF13460 NAD(P)H-binding LRX86_10005 PF01649 Ribosomal protein S20 LRX86_10015 PF00459 Inositol monophosphatase family LRX86_10030 PF00005 ABC transporter LRX86_10030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRX86_10035 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10040 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10045 PF01432 Peptidase family M3 LRX86_10060 PF07715 TonB-dependent Receptor Plug Domain LRX86_10060 PF00593 TonB dependent receptor LRX86_10070 PF01618 MotA/TolQ/ExbB proton channel family LRX86_10075 PF02472 Biopolymer transport protein ExbD/TolR LRX86_10080 PF02472 Biopolymer transport protein ExbD/TolR LRX86_10090 PF01274 Malate synthase LRX86_10095 PF03969 AFG1-like ATPase LRX86_10105 PF00743 Flavin-binding monooxygenase-like LRX86_10115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LRX86_10125 PF00216 Bacterial DNA-binding protein LRX86_10130 PF00575 S1 RNA binding domain LRX86_10135 PF02224 Cytidylate kinase LRX86_10145 PF14437 MafB19-like deaminase LRX86_10155 PF03167 Uracil DNA glycosylase superfamily LRX86_10165 PF03934 Type II secretion system (T2SS), protein K LRX86_10170 PF07963 Prokaryotic N-terminal methylation motif LRX86_10170 PF11612 Type II secretion system (T2SS), protein J LRX86_10175 PF07963 Prokaryotic N-terminal methylation motif LRX86_10175 PF02501 Type II secretion system (T2SS), protein I LRX86_10190 PF01026 TatD related DNase LRX86_10200 PF09115 DNA polymerase III, delta subunit, C terminal LRX86_10205 PF02348 Cytidylyltransferase LRX86_10210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LRX86_10215 PF00664 ABC transporter transmembrane region LRX86_10215 PF00005 ABC transporter LRX86_10225 PF01618 MotA/TolQ/ExbB proton channel family LRX86_10230 PF17762 HTH domain found in ParB protein LRX86_10230 PF02195 ParB-like nuclease domain LRX86_10235 PF13614 AAA domain LRX86_10240 PF02527 rRNA small subunit methyltransferase G LRX86_10245 PF00483 Nucleotidyl transferase LRX86_10250 PF01636 Phosphotransferase enzyme family LRX86_10255 PF03968 OstA-like protein LRX86_10255 PF04453 LPS transport system D LRX86_10260 PF00639 PPIC-type PPIASE domain LRX86_10260 PF09312 SurA N-terminal domain LRX86_10265 PF01116 Fructose-bisphosphate aldolase class-II LRX86_10275 PF00162 Phosphoglycerate kinase LRX86_10285 PF02545 Maf-like protein LRX86_10290 PF08007 Cupin superfamily protein LRX86_10305 PF00375 Sodium:dicarboxylate symporter family LRX86_10310 PF06912 Protein of unknown function (DUF1275) LRX86_10315 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LRX86_10320 PF00664 ABC transporter transmembrane region LRX86_10320 PF00005 ABC transporter LRX86_10330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRX86_10330 PF12833 Helix-turn-helix domain LRX86_10335 PF01597 Glycine cleavage H-protein LRX86_10340 PF02146 Sir2 family LRX86_10345 PF00474 Sodium:solute symporter family LRX86_10350 PF01037 Lrp/AsnC ligand binding domain LRX86_10355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LRX86_10355 PF14850 DNA-binding domain of Proline dehydrogenase LRX86_10355 PF00171 Aldehyde dehydrogenase family LRX86_10355 PF01619 Proline dehydrogenase LRX86_10360 PF04229 GrpB protein LRX86_10365 PF05958 tRNA (Uracil-5-)-methyltransferase LRX86_10375 PF09992 Phosphodiester glycosidase LRX86_10385 PF04264 YceI-like domain LRX86_10395 PF02779 Transketolase, pyrimidine binding domain LRX86_10395 PF02780 Transketolase, C-terminal domain LRX86_10395 PF00456 Transketolase, thiamine diphosphate binding domain LRX86_10400 PF02773 S-adenosylmethionine synthetase, C-terminal domain LRX86_10400 PF02772 S-adenosylmethionine synthetase, central domain LRX86_10400 PF00438 S-adenosylmethionine synthetase, N-terminal domain LRX86_10420 PF00905 Penicillin binding protein transpeptidase domain LRX86_10435 PF02075 Crossover junction endodeoxyribonuclease RuvC LRX86_10440 PF01256 Carbohydrate kinase LRX86_10440 PF03853 YjeF-related protein N-terminus LRX86_10445 PF08331 Domain of unknown function (DUF1730) LRX86_10450 PF04055 Radical SAM superfamily LRX86_10450 PF06968 Biotin and Thiamin Synthesis associated domain LRX86_10465 PF16970 Type-1 fimbrial protein, A LRX86_10470 PF02753 Pili assembly chaperone PapD, C-terminal domain LRX86_10470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LRX86_10475 PF00577 Outer membrane usher protein LRX86_10475 PF13954 PapC N-terminal domain LRX86_10475 PF13953 PapC C-terminal domain LRX86_10495 PF00892 EamA-like transporter family LRX86_10505 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LRX86_10515 PF03466 LysR substrate binding domain LRX86_10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10535 PF00440 Bacterial regulatory proteins, tetR family LRX86_10545 PF01709 Transcriptional regulator LRX86_10550 PF01037 Lrp/AsnC ligand binding domain LRX86_10560 PF00005 ABC transporter LRX86_10565 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10570 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_10585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRX86_10595 PF00296 Luciferase-like monooxygenase LRX86_10600 PF03180 NLPA lipoprotein LRX86_10605 PF03180 NLPA lipoprotein LRX86_10610 PF09383 NIL domain LRX86_10610 PF00005 ABC transporter LRX86_10615 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10620 PF01926 50S ribosome-binding GTPase LRX86_10620 PF06071 Protein of unknown function (DUF933) LRX86_10645 PF03591 AzlC protein LRX86_10650 PF05437 Branched-chain amino acid transport protein (AzlD) LRX86_10660 PF02222 ATP-grasp domain LRX86_10665 PF08335 GlnD PII-uridylyltransferase LRX86_10665 PF01966 HD domain LRX86_10665 PF01909 Nucleotidyltransferase domain LRX86_10670 PF00155 Aminotransferase class I and II LRX86_10680 PF12852 Cupin LRX86_10680 PF12833 Helix-turn-helix domain LRX86_10685 PF00255 Glutathione peroxidase LRX86_10690 PF01641 SelR domain LRX86_10695 PF00155 Aminotransferase class I and II LRX86_10700 PF00375 Sodium:dicarboxylate symporter family LRX86_10705 PF17763 Glutaminase/Asparaginase C-terminal domain LRX86_10705 PF00710 Asparaginase, N-terminal LRX86_10710 PF01336 OB-fold nucleic acid binding domain LRX86_10710 PF02811 PHP domain LRX86_10710 PF14579 Helix-hairpin-helix motif LRX86_10710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LRX86_10710 PF07733 Bacterial DNA polymerase III alpha NTPase domain LRX86_10715 PF00588 SpoU rRNA Methylase family LRX86_10720 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_10735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_10735 PF13192 Thioredoxin domain LRX86_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10750 PF03466 LysR substrate binding domain LRX86_10755 PF01758 Sodium Bile acid symporter family LRX86_10760 PF01022 Bacterial regulatory protein, arsR family LRX86_10765 PF03960 ArsC family LRX86_10775 PF13382 Adenine deaminase C-terminal domain LRX86_10775 PF01979 Amidohydrolase family LRX86_10785 PF03466 LysR substrate binding domain LRX86_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10795 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LRX86_10800 PF01177 Asp/Glu/Hydantoin racemase LRX86_10805 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LRX86_10810 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_10815 PF00005 ABC transporter LRX86_10820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRX86_10830 PF00083 Sugar (and other) transporter LRX86_10835 PF00296 Luciferase-like monooxygenase LRX86_10840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_10840 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_10840 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRX86_10850 PF01654 Cytochrome bd terminal oxidase subunit I LRX86_10855 PF02322 Cytochrome bd terminal oxidase subunit II LRX86_10880 PF03466 LysR substrate binding domain LRX86_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10895 PF00698 Acyl transferase domain LRX86_10900 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LRX86_10910 PF01039 Carboxyl transferase domain LRX86_10915 PF06857 Malonate decarboxylase delta subunit (MdcD) LRX86_10920 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LRX86_10925 PF16957 Malonate decarboxylase, alpha subunit, transporter LRX86_10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10930 PF03466 LysR substrate binding domain LRX86_10940 PF07690 Major Facilitator Superfamily LRX86_10955 PF00392 Bacterial regulatory proteins, gntR family LRX86_10955 PF00155 Aminotransferase class I and II LRX86_10960 PF04172 LrgB-like family LRX86_10965 PF03788 LrgA family LRX86_10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10970 PF03466 LysR substrate binding domain LRX86_10975 PF14834 Glutathione S-transferase, C-terminal domain LRX86_10975 PF02798 Glutathione S-transferase, N-terminal domain LRX86_10980 PF02798 Glutathione S-transferase, N-terminal domain LRX86_10985 PF03466 LysR substrate binding domain LRX86_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_10995 PF00581 Rhodanese-like domain LRX86_11000 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_11010 PF00266 Aminotransferase class-V LRX86_11015 PF01810 LysE type translocator LRX86_11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_11020 PF03466 LysR substrate binding domain LRX86_11030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRX86_11035 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRX86_11040 PF00005 ABC transporter LRX86_11045 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_11050 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_11065 PF00072 Response regulator receiver domain LRX86_11070 PF00072 Response regulator receiver domain LRX86_11070 PF09308 LuxQ, periplasmic LRX86_11070 PF00512 His Kinase A (phospho-acceptor) domain LRX86_11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_11080 PF13404 AsnC-type helix-turn-helix domain LRX86_11080 PF01037 Lrp/AsnC ligand binding domain LRX86_11090 PF00717 Peptidase S24-like LRX86_11120 PF00199 Catalase LRX86_11120 PF06628 Catalase-related immune-responsive LRX86_11120 PF18011 C-terminal domain found in long catalases LRX86_11130 PF02464 Competence-damaged protein LRX86_11130 PF00994 Probable molybdopterin binding domain LRX86_11130 PF18146 Damage-inducible protein CinA KH domain LRX86_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_11165 PF03466 LysR substrate binding domain LRX86_11185 PF13193 AMP-binding enzyme C-terminal domain LRX86_11185 PF00501 AMP-binding enzyme LRX86_11190 PF00440 Bacterial regulatory proteins, tetR family LRX86_11195 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_11195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_11195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_11200 PF01039 Carboxyl transferase domain LRX86_11205 PF00378 Enoyl-CoA hydratase/isomerase LRX86_11210 PF02785 Biotin carboxylase C-terminal domain LRX86_11210 PF00364 Biotin-requiring enzyme LRX86_11210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRX86_11210 PF18140 Propionyl-coenzyme A carboxylase BT domain LRX86_11210 PF00289 Biotin carboxylase, N-terminal domain LRX86_11215 PF00682 HMGL-like LRX86_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_11220 PF03466 LysR substrate binding domain LRX86_11235 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRX86_11235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_11235 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_11235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_11245 PF07690 Major Facilitator Superfamily LRX86_11255 PF01144 Coenzyme A transferase LRX86_11260 PF01144 Coenzyme A transferase LRX86_11265 PF07690 Major Facilitator Superfamily LRX86_11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_11270 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_11275 PF00378 Enoyl-CoA hydratase/isomerase LRX86_11285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRX86_11285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRX86_11285 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LRX86_11290 PF02803 Thiolase, C-terminal domain LRX86_11290 PF00108 Thiolase, N-terminal domain LRX86_11295 PF09339 IclR helix-turn-helix domain LRX86_11300 PF07690 Major Facilitator Superfamily LRX86_11310 PF03060 Nitronate monooxygenase LRX86_11320 PF09339 IclR helix-turn-helix domain LRX86_11325 PF02515 CoA-transferase family III LRX86_11330 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_11330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_11330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_11335 PF07690 Major Facilitator Superfamily LRX86_11340 PF13419 Haloacid dehalogenase-like hydrolase LRX86_11345 PF00266 Aminotransferase class-V LRX86_11350 PF01266 FAD dependent oxidoreductase LRX86_11355 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_11360 PF08402 TOBE domain LRX86_11360 PF00005 ABC transporter LRX86_11370 PF07702 UTRA domain LRX86_11370 PF00392 Bacterial regulatory proteins, gntR family LRX86_11375 PF01494 FAD binding domain LRX86_11380 PF09339 IclR helix-turn-helix domain LRX86_11380 PF01614 Bacterial transcriptional regulator LRX86_11385 PF02525 Flavodoxin-like fold LRX86_11390 PF03466 LysR substrate binding domain LRX86_11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_11395 PF01292 Prokaryotic cytochrome b561 LRX86_11400 PF00199 Catalase LRX86_11405 PF07690 Major Facilitator Superfamily LRX86_11410 PF00682 HMGL-like LRX86_11415 PF02515 CoA-transferase family III LRX86_11430 PF12833 Helix-turn-helix domain LRX86_11430 PF06719 AraC-type transcriptional regulator N-terminus LRX86_11465 PF03061 Thioesterase superfamily LRX86_11470 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_11475 PF07848 PaaX-like protein LRX86_11475 PF08223 PaaX-like protein C-terminal domain LRX86_11480 PF00501 AMP-binding enzyme LRX86_11480 PF14535 AMP-binding enzyme C-terminal domain LRX86_11485 PF02803 Thiolase, C-terminal domain LRX86_11485 PF00108 Thiolase, N-terminal domain LRX86_11490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRX86_11490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRX86_11490 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LRX86_11495 PF00378 Enoyl-CoA hydratase/isomerase LRX86_11500 PF00378 Enoyl-CoA hydratase/isomerase LRX86_11505 PF00175 Oxidoreductase NAD-binding domain LRX86_11505 PF00970 Oxidoreductase FAD-binding domain LRX86_11505 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_11510 PF01883 Iron-sulfur cluster assembly protein LRX86_11515 PF05138 Phenylacetic acid catabolic protein LRX86_11520 PF06243 Phenylacetic acid degradation B LRX86_11525 PF05138 Phenylacetic acid catabolic protein LRX86_11530 PF00171 Aldehyde dehydrogenase family LRX86_11530 PF01575 MaoC like domain LRX86_11535 PF03313 Serine dehydratase alpha chain LRX86_11535 PF03315 Serine dehydratase beta chain LRX86_11540 PF13520 Amino acid permease LRX86_11545 PF00171 Aldehyde dehydrogenase family LRX86_11550 PF00083 Sugar (and other) transporter LRX86_11560 PF04324 BFD-like [2Fe-2S] binding domain LRX86_11560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_11570 PF01266 FAD dependent oxidoreductase LRX86_11575 PF05544 Proline racemase LRX86_11580 PF00392 Bacterial regulatory proteins, gntR family LRX86_11590 PF00701 Dihydrodipicolinate synthetase family LRX86_11600 PF09278 MerR, DNA binding LRX86_11600 PF00376 MerR family regulatory protein LRX86_11610 PF02677 Epoxyqueuosine reductase QueH LRX86_11625 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_11625 PF13823 Alcohol dehydrogenase GroES-associated LRX86_11625 PF00107 Zinc-binding dehydrogenase LRX86_11640 PF00684 DnaJ central domain LRX86_11640 PF00226 DnaJ domain LRX86_11640 PF01556 DnaJ C terminal domain LRX86_11645 PF00654 Voltage gated chloride channel LRX86_11650 PF00364 Biotin-requiring enzyme LRX86_11650 PF00289 Biotin carboxylase, N-terminal domain LRX86_11650 PF02785 Biotin carboxylase C-terminal domain LRX86_11650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRX86_11660 PF07286 Protein of unknown function (DUF1445) LRX86_11665 PF03746 LamB/YcsF family LRX86_11670 PF01566 Natural resistance-associated macrophage protein LRX86_11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_11675 PF03466 LysR substrate binding domain LRX86_11690 PF13419 Haloacid dehalogenase-like hydrolase LRX86_11710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRX86_11710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRX86_11730 PF07690 Major Facilitator Superfamily LRX86_11745 PF01544 CorA-like Mg2+ transporter protein LRX86_11750 PF03279 Bacterial lipid A biosynthesis acyltransferase LRX86_11755 PF00563 EAL domain LRX86_11755 PF03707 Bacterial signalling protein N terminal repeat LRX86_11755 PF00990 Diguanylate cyclase, GGDEF domain LRX86_11760 PF00892 EamA-like transporter family LRX86_11765 PF01037 Lrp/AsnC ligand binding domain LRX86_11770 PF01624 MutS domain I LRX86_11770 PF05188 MutS domain II LRX86_11770 PF05192 MutS domain III LRX86_11770 PF05190 MutS family domain IV LRX86_11770 PF00488 MutS domain V LRX86_11780 PF11953 Domain of unknown function (DUF3470) LRX86_11780 PF00037 4Fe-4S binding domain LRX86_11790 PF01596 O-methyltransferase LRX86_11800 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_11805 PF01205 Uncharacterized protein family UPF0029 LRX86_11815 PF03412 Peptidase C39 family LRX86_11815 PF00664 ABC transporter transmembrane region LRX86_11815 PF00005 ABC transporter LRX86_11820 PF02321 Outer membrane efflux protein LRX86_11825 PF00005 ABC transporter LRX86_11825 PF12399 Branched-chain amino acid ATP-binding cassette transporter LRX86_11830 PF03968 OstA-like protein LRX86_11845 PF00571 CBS domain LRX86_11845 PF01380 SIS domain LRX86_11850 PF01406 tRNA synthetases class I (C) catalytic domain LRX86_11850 PF09190 DALR domain LRX86_11890 PF01638 HxlR-like helix-turn-helix LRX86_11895 PF07690 Major Facilitator Superfamily LRX86_11920 PF03807 NADP oxidoreductase coenzyme F420-dependent LRX86_11920 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRX86_11930 PF00313 'Cold-shock' DNA-binding domain LRX86_11935 PF01810 LysE type translocator LRX86_11965 PF13742 OB-fold nucleic acid binding domain LRX86_11965 PF02601 Exonuclease VII, large subunit LRX86_12000 PF00376 MerR family regulatory protein LRX86_12000 PF09278 MerR, DNA binding LRX86_12005 PF00403 Heavy-metal-associated domain LRX86_12010 PF00403 Heavy-metal-associated domain LRX86_12015 PF03466 LysR substrate binding domain LRX86_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_12020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRX86_12020 PF00355 Rieske [2Fe-2S] domain LRX86_12025 PF00866 Ring hydroxylating beta subunit LRX86_12030 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_12030 PF00970 Oxidoreductase FAD-binding domain LRX86_12030 PF00175 Oxidoreductase NAD-binding domain LRX86_12035 PF00106 short chain dehydrogenase LRX86_12040 PF03594 Benzoate membrane transport protein LRX86_12045 PF07690 Major Facilitator Superfamily LRX86_12055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LRX86_12055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LRX86_12060 PF04408 Helicase associated domain (HA2) LRX86_12060 PF00270 DEAD/DEAH box helicase LRX86_12060 PF11898 Domain of unknown function (DUF3418) LRX86_12060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LRX86_12060 PF00271 Helicase conserved C-terminal domain LRX86_12065 PF10417 C-terminal domain of 1-Cys peroxiredoxin LRX86_12065 PF00578 AhpC/TSA family LRX86_12085 PF13192 Thioredoxin domain LRX86_12085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_12095 PF02798 Glutathione S-transferase, N-terminal domain LRX86_12095 PF00043 Glutathione S-transferase, C-terminal domain LRX86_12105 PF02390 Putative methyltransferase LRX86_12110 PF00043 Glutathione S-transferase, C-terminal domain LRX86_12110 PF13417 Glutathione S-transferase, N-terminal domain LRX86_12120 PF00691 OmpA family LRX86_12120 PF13488 Glycine zipper LRX86_12125 PF01979 Amidohydrolase family LRX86_12130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRX86_12130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRX86_12140 PF10672 S-adenosylmethionine-dependent methyltransferase LRX86_12140 PF02926 THUMP domain LRX86_12140 PF01170 Putative RNA methylase family UPF0020 LRX86_12155 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_12155 PF07724 AAA domain (Cdc48 subfamily) LRX86_12155 PF17871 AAA lid domain LRX86_12155 PF02861 Clp amino terminal domain, pathogenicity island component LRX86_12155 PF10431 C-terminal, D2-small domain, of ClpB protein LRX86_12170 PF02566 OsmC-like protein LRX86_12180 PF00027 Cyclic nucleotide-binding domain LRX86_12180 PF13545 Crp-like helix-turn-helix domain LRX86_12185 PF00248 Aldo/keto reductase family LRX86_12200 PF00709 Adenylosuccinate synthetase LRX86_12205 PF13393 Histidyl-tRNA synthetase LRX86_12210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRX86_12210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRX86_12215 PF02272 DHHA1 domain LRX86_12215 PF01411 tRNA synthetases class II (A) LRX86_12215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRX86_12220 PF00589 Phage integrase family LRX86_12220 PF13356 Arm DNA-binding domain LRX86_12230 PF00577 Outer membrane usher protein LRX86_12230 PF13953 PapC C-terminal domain LRX86_12230 PF13954 PapC N-terminal domain LRX86_12565 PF00696 Amino acid kinase family LRX86_12565 PF01842 ACT domain LRX86_12565 PF13840 ACT domain LRX86_12570 PF02599 Global regulator protein family LRX86_12575 PF01351 Ribonuclease HII LRX86_12585 PF01292 Prokaryotic cytochrome b561 LRX86_12595 PF00962 Adenosine/AMP deaminase LRX86_12600 PF00860 Permease family LRX86_12610 PF00743 Flavin-binding monooxygenase-like LRX86_12615 PF00106 short chain dehydrogenase LRX86_12625 PF02678 Pirin LRX86_12625 PF17954 Quercetinase C-terminal cupin domain LRX86_12630 PF17932 Tetracyclin repressor-like, C-terminal domain LRX86_12630 PF00440 Bacterial regulatory proteins, tetR family LRX86_12640 PF00106 short chain dehydrogenase LRX86_12645 PF00743 Flavin-binding monooxygenase-like LRX86_12650 PF04072 Leucine carboxyl methyltransferase LRX86_12655 PF12833 Helix-turn-helix domain LRX86_12655 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRX86_12660 PF00743 Flavin-binding monooxygenase-like LRX86_12665 PF00106 short chain dehydrogenase LRX86_12670 PF07859 alpha/beta hydrolase fold LRX86_12675 PF05199 GMC oxidoreductase LRX86_12685 PF07690 Major Facilitator Superfamily LRX86_12690 PF00884 Sulfatase LRX86_12695 PF03781 Sulfatase-modifying factor enzyme 1 LRX86_12705 PF00355 Rieske [2Fe-2S] domain LRX86_12710 PF00175 Oxidoreductase NAD-binding domain LRX86_12710 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_12725 PF07690 Major Facilitator Superfamily LRX86_12730 PF00378 Enoyl-CoA hydratase/isomerase LRX86_12735 PF00171 Aldehyde dehydrogenase family LRX86_12745 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_12745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_12745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_12750 PF03573 outer membrane porin, OprD family LRX86_12765 PF07519 Tannase and feruloyl esterase LRX86_12770 PF00392 Bacterial regulatory proteins, gntR family LRX86_12770 PF07729 FCD domain LRX86_12775 PF00171 Aldehyde dehydrogenase family LRX86_12780 PF00701 Dihydrodipicolinate synthetase family LRX86_12785 PF13378 Enolase C-terminal domain-like LRX86_12790 PF07690 Major Facilitator Superfamily LRX86_12795 PF08666 SAF domain LRX86_12795 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LRX86_12800 PF00892 EamA-like transporter family LRX86_12805 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRX86_12805 PF12833 Helix-turn-helix domain LRX86_12810 PF00171 Aldehyde dehydrogenase family LRX86_12815 PF00324 Amino acid permease LRX86_12820 PF04958 Arginine N-succinyltransferase beta subunit LRX86_12825 PF00202 Aminotransferase class-III LRX86_12835 PF00171 Aldehyde dehydrogenase family LRX86_12845 PF00392 Bacterial regulatory proteins, gntR family LRX86_12845 PF07729 FCD domain LRX86_12855 PF00324 Amino acid permease LRX86_12860 PF01266 FAD dependent oxidoreductase LRX86_12865 PF00324 Amino acid permease LRX86_12930 PF03527 RHS protein LRX86_13030 PF03180 NLPA lipoprotein LRX86_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_13040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_13045 PF00764 Arginosuccinate synthase LRX86_13050 PF00563 EAL domain LRX86_13050 PF00990 Diguanylate cyclase, GGDEF domain LRX86_13050 PF00360 Phytochrome region LRX86_13050 PF01590 GAF domain LRX86_13055 PF01979 Amidohydrolase family LRX86_13060 PF00929 Exonuclease LRX86_13070 PF07715 TonB-dependent Receptor Plug Domain LRX86_13070 PF00593 TonB dependent receptor LRX86_13075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRX86_13075 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_13080 PF00005 ABC transporter LRX86_13080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRX86_13085 PF12911 N-terminal TM domain of oligopeptide transport permease C LRX86_13085 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_13090 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_13095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRX86_13100 PF01464 Transglycosylase SLT domain LRX86_13100 PF01476 LysM domain LRX86_13100 PF01464 Transglycosylase SLT domain LRX86_13100 PF01476 LysM domain LRX86_13105 PF00929 Exonuclease LRX86_13115 PF09297 NADH pyrophosphatase zinc ribbon domain LRX86_13115 PF00293 NUDIX domain LRX86_13125 PF04972 BON domain LRX86_13130 PF02021 Uncharacterised protein family UPF0102 LRX86_13135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRX86_13145 PF03466 LysR substrate binding domain LRX86_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_13150 PF01810 LysE type translocator LRX86_13160 PF13411 MerR HTH family regulatory protein LRX86_13170 PF01494 FAD binding domain LRX86_13175 PF01494 FAD binding domain LRX86_13180 PF00557 Metallopeptidase family M24 LRX86_13180 PF05195 Aminopeptidase P, N-terminal domain LRX86_13220 PF01812 5-formyltetrahydrofolate cyclo-ligase family LRX86_13225 PF00691 OmpA family LRX86_13225 PF04355 SmpA / OmlA family LRX86_13230 PF05662 Coiled stalk of trimeric autotransporter adhesin LRX86_13230 PF05658 Head domain of trimeric autotransporter adhesin LRX86_13230 PF03895 YadA-like membrane anchor domain LRX86_13230 PF13018 Extended Signal Peptide of Type V secretion system LRX86_13230 PF05662 Coiled stalk of trimeric autotransporter adhesin LRX86_13230 PF05658 Head domain of trimeric autotransporter adhesin LRX86_13230 PF03895 YadA-like membrane anchor domain LRX86_13230 PF13018 Extended Signal Peptide of Type V secretion system LRX86_13230 PF05662 Coiled stalk of trimeric autotransporter adhesin LRX86_13230 PF05658 Head domain of trimeric autotransporter adhesin LRX86_13230 PF03895 YadA-like membrane anchor domain LRX86_13230 PF13018 Extended Signal Peptide of Type V secretion system LRX86_13235 PF04355 SmpA / OmlA family LRX86_13235 PF00691 OmpA family LRX86_13240 PF05662 Coiled stalk of trimeric autotransporter adhesin LRX86_13240 PF05658 Head domain of trimeric autotransporter adhesin LRX86_13240 PF13018 Extended Signal Peptide of Type V secretion system LRX86_13240 PF03895 YadA-like membrane anchor domain LRX86_13245 PF00004 ATPase family associated with various cellular activities (AAA) LRX86_13245 PF05362 Lon protease (S16) C-terminal proteolytic domain LRX86_13245 PF02190 ATP-dependent protease La (LON) substrate-binding domain LRX86_13250 PF02590 Predicted SPOUT methyltransferase LRX86_13255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LRX86_13265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRX86_13265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRX86_13270 PF04060 Putative Fe-S cluster LRX86_13275 PF00730 HhH-GPD superfamily base excision DNA repair protein LRX86_13275 PF10576 Iron-sulfur binding domain of endonuclease III LRX86_13275 PF00633 Helix-hairpin-helix motif LRX86_13285 PF05191 Adenylate kinase, active site lid LRX86_13300 PF00905 Penicillin binding protein transpeptidase domain LRX86_13300 PF03717 Penicillin-binding Protein dimerisation domain LRX86_13315 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRX86_13320 PF01730 UreF LRX86_13325 PF05194 UreE urease accessory protein, C-terminal domain LRX86_13325 PF02814 UreE urease accessory protein, N-terminal domain LRX86_13330 PF01979 Amidohydrolase family LRX86_13330 PF00449 Urease alpha-subunit, N-terminal domain LRX86_13335 PF00699 Urease beta subunit LRX86_13340 PF00547 Urease, gamma subunit LRX86_13345 PF01774 UreD urease accessory protein LRX86_13360 PF00463 Isocitrate lyase family LRX86_13365 PF03466 LysR substrate binding domain LRX86_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_13370 PF01595 Cyclin M transmembrane N-terminal domain LRX86_13370 PF03471 Transporter associated domain LRX86_13370 PF00571 CBS domain LRX86_13375 PF03600 Citrate transporter LRX86_13390 PF00009 Elongation factor Tu GTP binding domain LRX86_13395 PF01507 Phosphoadenosine phosphosulfate reductase family LRX86_13405 PF14052 Capsule assembly protein Wzi LRX86_13410 PF00152 tRNA synthetases class II (D, K and N) LRX86_13410 PF01336 OB-fold nucleic acid binding domain LRX86_13425 PF00301 Rubredoxin LRX86_13430 PF18113 Rubredoxin binding C-terminal domain LRX86_13430 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_13435 PF00561 alpha/beta hydrolase fold LRX86_13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_13440 PF03466 LysR substrate binding domain LRX86_13450 PF02503 Polyphosphate kinase middle domain LRX86_13450 PF13090 Polyphosphate kinase C-terminal domain 2 LRX86_13450 PF17941 Polyphosphate kinase C-terminal domain 1 LRX86_13450 PF13089 Polyphosphate kinase N-terminal domain LRX86_13455 PF00912 Transglycosylase LRX86_13460 PF01694 Rhomboid family LRX86_13470 PF00005 ABC transporter LRX86_13475 PF13472 GDSL-like Lipase/Acylhydrolase family LRX86_13480 PF00484 Carbonic anhydrase LRX86_13485 PF00561 alpha/beta hydrolase fold LRX86_13495 PF00593 TonB dependent receptor LRX86_13495 PF07715 TonB-dependent Receptor Plug Domain LRX86_13500 PF01521 Iron-sulphur cluster biosynthesis LRX86_13500 PF01106 NifU-like domain LRX86_13510 PF00884 Sulfatase LRX86_13515 PF03781 Sulfatase-modifying factor enzyme 1 LRX86_13530 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_13535 PF01384 Phosphate transporter family LRX86_13540 PF02310 B12 binding domain LRX86_13540 PF02607 B12 binding domain LRX86_13540 PF02965 Vitamin B12 dependent methionine synthase, activation domain LRX86_13540 PF00809 Pterin binding enzyme LRX86_13540 PF02574 Homocysteine S-methyltransferase LRX86_13560 PF02779 Transketolase, pyrimidine binding domain LRX86_13560 PF02780 Transketolase, C-terminal domain LRX86_13565 PF00456 Transketolase, thiamine diphosphate binding domain LRX86_13580 PF03466 LysR substrate binding domain LRX86_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_13590 PF01263 Aldose 1-epimerase LRX86_13595 PF07690 Major Facilitator Superfamily LRX86_13600 PF12833 Helix-turn-helix domain LRX86_13600 PF02311 AraC-like ligand binding domain LRX86_13605 PF04960 Glutaminase LRX86_13610 PF01327 Polypeptide deformylase LRX86_13615 PF07690 Major Facilitator Superfamily LRX86_13625 PF00205 Thiamine pyrophosphate enzyme, central domain LRX86_13625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRX86_13625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRX86_13630 PF00171 Aldehyde dehydrogenase family LRX86_13635 PF01958 Domain of unknown function DUF108 LRX86_13635 PF03447 Homoserine dehydrogenase, NAD binding domain LRX86_13645 PF12697 Alpha/beta hydrolase family LRX86_13655 PF07690 Major Facilitator Superfamily LRX86_13660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_13660 PF14759 Reductase C-terminal LRX86_13665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRX86_13675 PF00355 Rieske [2Fe-2S] domain LRX86_13685 PF00355 Rieske [2Fe-2S] domain LRX86_13690 PF09339 IclR helix-turn-helix domain LRX86_13690 PF01614 Bacterial transcriptional regulator LRX86_13705 PF00378 Enoyl-CoA hydratase/isomerase LRX86_13715 PF00535 Glycosyl transferase family 2 LRX86_13720 PF14883 Hypothetical glycosyl hydrolase family 13 LRX86_13720 PF01522 Polysaccharide deacetylase LRX86_13725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_13730 PF07152 YaeQ protein LRX86_13735 PF00375 Sodium:dicarboxylate symporter family LRX86_13740 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRX86_13740 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRX86_13750 PF03061 Thioesterase superfamily LRX86_13760 PF02028 BCCT, betaine/carnitine/choline family transporter LRX86_13765 PF02028 BCCT, betaine/carnitine/choline family transporter LRX86_13770 PF13977 BetI-type transcriptional repressor, C-terminal LRX86_13770 PF00440 Bacterial regulatory proteins, tetR family LRX86_13775 PF00171 Aldehyde dehydrogenase family LRX86_13780 PF05199 GMC oxidoreductase LRX86_13780 PF00732 GMC oxidoreductase LRX86_13785 PF06039 Malate:quinone oxidoreductase (Mqo) LRX86_13795 PF02574 Homocysteine S-methyltransferase LRX86_13800 PF13520 Amino acid permease LRX86_13825 PF01126 Heme oxygenase LRX86_13835 PF04575 Protein of unknown function (DUF560) LRX86_13845 PF00593 TonB dependent receptor LRX86_13845 PF07715 TonB-dependent Receptor Plug Domain LRX86_13855 PF04542 Sigma-70 region 2 LRX86_13855 PF08281 Sigma-70, region 4 LRX86_13865 PF00701 Dihydrodipicolinate synthetase family LRX86_13870 PF00083 Sugar (and other) transporter LRX86_13910 PF11867 Domain of unknown function (DUF3387) LRX86_13910 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LRX86_13910 PF18766 SWI2/SNF2 ATPase LRX86_13920 PF12161 HsdM N-terminal domain LRX86_13920 PF02384 N-6 DNA Methylase LRX86_13925 PF02384 N-6 DNA Methylase LRX86_13935 PF07728 AAA domain (dynein-related subfamily) LRX86_13935 PF12102 Domain of unknown function (DUF3578) LRX86_13935 PF07728 AAA domain (dynein-related subfamily) LRX86_13935 PF12102 Domain of unknown function (DUF3578) LRX86_13950 PF07690 Major Facilitator Superfamily LRX86_13955 PF13533 Biotin-lipoyl like LRX86_13960 PF03061 Thioesterase superfamily LRX86_13965 PF00490 Delta-aminolevulinic acid dehydratase LRX86_13970 PF01266 FAD dependent oxidoreductase LRX86_13975 PF08338 Domain of unknown function (DUF1731) LRX86_13975 PF01370 NAD dependent epimerase/dehydratase family LRX86_13995 PF12320 Type 5 capsule protein repressor C-terminal domain LRX86_13995 PF00149 Calcineurin-like phosphoesterase LRX86_14005 PF01168 Alanine racemase, N-terminal domain LRX86_14010 PF00437 Type II/IV secretion system protein LRX86_14015 PF00437 Type II/IV secretion system protein LRX86_14020 PF01475 Ferric uptake regulator family LRX86_14025 PF04355 SmpA / OmlA family LRX86_14030 PF03658 RnfH family Ubiquitin LRX86_14040 PF01814 Hemerythrin HHE cation binding domain LRX86_14045 PF13230 Glutamine amidotransferases class-II LRX86_14055 PF00696 Amino acid kinase family LRX86_14060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRX86_14060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRX86_14060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRX86_14060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRX86_14065 PF00692 dUTPase LRX86_14070 PF00580 UvrD/REP helicase N-terminal domain LRX86_14070 PF13361 UvrD-like helicase C-terminal domain LRX86_14075 PF13488 Glycine zipper LRX86_14075 PF00691 OmpA family LRX86_14080 PF01553 Acyltransferase LRX86_14090 PF03775 Septum formation inhibitor MinC, C-terminal domain LRX86_14095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LRX86_14100 PF03776 Septum formation topological specificity factor MinE LRX86_14110 PF01810 LysE type translocator LRX86_14115 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LRX86_14115 PF17854 FtsK alpha domain LRX86_14115 PF09397 Ftsk gamma domain LRX86_14115 PF01580 FtsK/SpoIIIE family LRX86_14120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_14125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LRX86_14130 PF04376 Arginine-tRNA-protein transferase, N terminus LRX86_14130 PF04377 Arginine-tRNA-protein transferase, C terminus LRX86_14135 PF00583 Acetyltransferase (GNAT) family LRX86_14150 PF03143 Elongation factor Tu C-terminal domain LRX86_14150 PF00009 Elongation factor Tu GTP binding domain LRX86_14150 PF03144 Elongation factor Tu domain 2 LRX86_14155 PF03144 Elongation factor Tu domain 2 LRX86_14155 PF00009 Elongation factor Tu GTP binding domain LRX86_14155 PF03764 Elongation factor G, domain IV LRX86_14155 PF00679 Elongation factor G C-terminus LRX86_14155 PF14492 Elongation Factor G, domain II LRX86_14160 PF00177 Ribosomal protein S7p/S5e LRX86_14165 PF00164 Ribosomal protein S12/S23 LRX86_14175 PF00109 Beta-ketoacyl synthase, N-terminal domain LRX86_14175 PF02801 Beta-ketoacyl synthase, C-terminal domain LRX86_14180 PF03653 Uncharacterised protein family (UPF0093) LRX86_14185 PF05726 Pirin C-terminal cupin domain LRX86_14185 PF02678 Pirin LRX86_14195 PF00795 Carbon-nitrogen hydrolase LRX86_14195 PF02540 NAD synthase LRX86_14210 PF00970 Oxidoreductase FAD-binding domain LRX86_14210 PF00175 Oxidoreductase NAD-binding domain LRX86_14210 PF00111 2Fe-2S iron-sulfur cluster binding domain LRX86_14215 PF00171 Aldehyde dehydrogenase family LRX86_14220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRX86_14220 PF00355 Rieske [2Fe-2S] domain LRX86_14225 PF07859 alpha/beta hydrolase fold LRX86_14230 PF02028 BCCT, betaine/carnitine/choline family transporter LRX86_14235 PF00180 Isocitrate/isopropylmalate dehydrogenase LRX86_14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14240 PF03466 LysR substrate binding domain LRX86_14260 PF00037 4Fe-4S binding domain LRX86_14265 PF01467 Cytidylyltransferase-like LRX86_14270 PF01668 SmpB protein LRX86_14275 PF03358 NADPH-dependent FMN reductase LRX86_14280 PF02578 Multi-copper polyphenol oxidoreductase laccase LRX86_14285 PF00849 RNA pseudouridylate synthase LRX86_14285 PF01479 S4 domain LRX86_14290 PF13525 Outer membrane lipoprotein LRX86_14295 PF10410 DnaB-helicase binding domain of primase LRX86_14295 PF08278 DNA primase DnaG DnaB-binding LRX86_14295 PF08275 DNA primase catalytic core, N-terminal domain LRX86_14295 PF01807 CHC2 zinc finger LRX86_14300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LRX86_14300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LRX86_14300 PF01488 Shikimate / quinate 5-dehydrogenase LRX86_14310 PF03550 Outer membrane lipoprotein LolB LRX86_14315 PF08544 GHMP kinases C terminal LRX86_14315 PF00288 GHMP kinases N terminal domain LRX86_14340 PF14572 Phosphoribosyl synthetase-associated domain LRX86_14340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LRX86_14345 PF01386 Ribosomal L25p family LRX86_14350 PF01195 Peptidyl-tRNA hydrolase LRX86_14355 PF02261 Aspartate decarboxylase LRX86_14370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRX86_14380 PF02581 Thiamine monophosphate synthase LRX86_14380 PF03070 TENA/THI-4/PQQC family LRX86_14380 PF08543 Phosphomethylpyrimidine kinase LRX86_14385 PF04972 BON domain LRX86_14385 PF01476 LysM domain LRX86_14390 PF00550 Phosphopantetheine attachment site LRX86_14400 PF00698 Acyl transferase domain LRX86_14405 PF01783 Ribosomal L32p protein family LRX86_14410 PF02620 Large ribosomal RNA subunit accumulation protein YceD LRX86_14415 PF04315 Elongation factor P hydroxylase LRX86_14420 PF01300 Telomere recombination LRX86_14425 PF02616 Segregation and condensation protein ScpA LRX86_14430 PF04079 Segregation and condensation complex subunit ScpB LRX86_14435 PF01479 S4 domain LRX86_14435 PF00849 RNA pseudouridylate synthase LRX86_14455 PF00155 Aminotransferase class I and II LRX86_14460 PF04055 Radical SAM superfamily LRX86_14460 PF06968 Biotin and Thiamin Synthesis associated domain LRX86_14460 PF00202 Aminotransferase class-III LRX86_14465 PF08241 Methyltransferase domain LRX86_14465 PF12697 Alpha/beta hydrolase family LRX86_14470 PF02358 Trehalose-phosphatase LRX86_14475 PF00982 Glycosyltransferase family 20 LRX86_14480 PF07690 Major Facilitator Superfamily LRX86_14485 PF00210 Ferritin-like domain LRX86_14490 PF00533 BRCA1 C Terminus (BRCT) domain LRX86_14490 PF01653 NAD-dependent DNA ligase adenylation domain LRX86_14490 PF03120 NAD-dependent DNA ligase OB-fold domain LRX86_14490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LRX86_14490 PF12826 Helix-hairpin-helix motif LRX86_14500 PF06470 SMC proteins Flexible Hinge Domain LRX86_14500 PF02463 RecF/RecN/SMC N terminal domain LRX86_14510 PF01925 Sulfite exporter TauE/SafE LRX86_14520 PF03309 Type III pantothenate kinase LRX86_14525 PF00448 SRP54-type protein, GTPase domain LRX86_14525 PF02881 SRP54-type protein, helical bundle domain LRX86_14525 PF02978 Signal peptide binding domain LRX86_14535 PF01207 Dihydrouridine synthase (Dus) LRX86_14570 PF00692 dUTPase LRX86_14585 PF01048 Phosphorylase superfamily LRX86_14590 PF10609 NUBPL iron-transfer P-loop NTPase LRX86_14600 PF01588 Putative tRNA binding domain LRX86_14600 PF09334 tRNA synthetases class I (M) LRX86_14625 PF13533 Biotin-lipoyl like LRX86_14630 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_14645 PF05552 Conserved TM helix LRX86_14660 PF00970 Oxidoreductase FAD-binding domain LRX86_14660 PF00175 Oxidoreductase NAD-binding domain LRX86_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14665 PF03466 LysR substrate binding domain LRX86_14670 PF00313 'Cold-shock' DNA-binding domain LRX86_14680 PF00361 Proton-conducting membrane transporter LRX86_14685 PF00361 Proton-conducting membrane transporter LRX86_14690 PF00361 Proton-conducting membrane transporter LRX86_14690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRX86_14695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LRX86_14700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LRX86_14705 PF12838 4Fe-4S dicluster domain LRX86_14710 PF00146 NADH dehydrogenase LRX86_14715 PF00384 Molybdopterin oxidoreductase LRX86_14715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LRX86_14715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRX86_14720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LRX86_14720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LRX86_14720 PF10531 SLBB domain LRX86_14730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LRX86_14730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LRX86_14735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LRX86_14740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LRX86_14745 PF17151 Periplasmic sensor domain LRX86_14745 PF00990 Diguanylate cyclase, GGDEF domain LRX86_14755 PF00512 His Kinase A (phospho-acceptor) domain LRX86_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_14755 PF00672 HAMP domain LRX86_14760 PF00072 Response regulator receiver domain LRX86_14760 PF00486 Transcriptional regulatory protein, C terminal LRX86_14770 PF03477 ATP cone domain LRX86_14770 PF00317 Ribonucleotide reductase, all-alpha domain LRX86_14770 PF02867 Ribonucleotide reductase, barrel domain LRX86_14780 PF00268 Ribonucleotide reductase, small chain LRX86_14805 PF17074 Darcynin, domain of unknown function LRX86_14830 PF01613 Flavin reductase like domain LRX86_14835 PF08267 Cobalamin-independent synthase, N-terminal domain LRX86_14835 PF01717 Cobalamin-independent synthase, Catalytic domain LRX86_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14845 PF03466 LysR substrate binding domain LRX86_14850 PF01810 LysE type translocator LRX86_14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14855 PF03466 LysR substrate binding domain LRX86_14860 PF07690 Major Facilitator Superfamily LRX86_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14870 PF03466 LysR substrate binding domain LRX86_14875 PF14537 Cytochrome c3 LRX86_14875 PF00890 FAD binding domain LRX86_14890 PF00440 Bacterial regulatory proteins, tetR family LRX86_14890 PF17932 Tetracyclin repressor-like, C-terminal domain LRX86_14895 PF02515 CoA-transferase family III LRX86_14900 PF07690 Major Facilitator Superfamily LRX86_14905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_14905 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_14905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_14910 PF03466 LysR substrate binding domain LRX86_14915 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_14915 PF00107 Zinc-binding dehydrogenase LRX86_14920 PF00962 Adenosine/AMP deaminase LRX86_14930 PF12167 Arm DNA-binding domain LRX86_14930 PF00589 Phage integrase family LRX86_14940 PF00436 Single-strand binding protein family LRX86_15075 PF07484 Phage Tail Collar Domain LRX86_15075 PF08400 Prophage tail fibre N-terminal LRX86_15075 PF03335 Phage tail fibre repeat LRX86_15165 PF07927 HicA toxin of bacterial toxin-antitoxin, LRX86_15170 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LRX86_15195 PF02445 Quinolinate synthetase A protein LRX86_15200 PF01960 ArgJ family LRX86_15205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRX86_15205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRX86_15210 PF00893 Small Multidrug Resistance protein LRX86_15225 PF00394 Multicopper oxidase LRX86_15225 PF07732 Multicopper oxidase LRX86_15225 PF07731 Multicopper oxidase LRX86_15240 PF00834 Ribulose-phosphate 3 epimerase family LRX86_15250 PF00756 Putative esterase LRX86_15260 PF04445 Putative SAM-dependent methyltransferase LRX86_15265 PF00814 Glycoprotease family LRX86_15270 PF00132 Bacterial transferase hexapeptide (six repeats) LRX86_15275 PF00293 NUDIX domain LRX86_15315 PF04715 Anthranilate synthase component I, N terminal region LRX86_15315 PF00425 chorismate binding enzyme LRX86_15320 PF00155 Aminotransferase class I and II LRX86_15325 PF00815 Histidinol dehydrogenase LRX86_15330 PF01634 ATP phosphoribosyltransferase LRX86_15335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRX86_15340 PF01722 BolA-like protein LRX86_15345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LRX86_15350 PF04963 Sigma-54 factor, core binding domain LRX86_15350 PF04552 Sigma-54, DNA binding domain LRX86_15350 PF00309 Sigma-54 factor, Activator interacting domain (AID) LRX86_15395 PF00795 Carbon-nitrogen hydrolase LRX86_15405 PF01047 MarR family LRX86_15410 PF02566 OsmC-like protein LRX86_15415 PF00437 Type II/IV secretion system protein LRX86_15435 PF01367 5'-3' exonuclease, C-terminal SAM fold LRX86_15435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LRX86_15435 PF00476 DNA polymerase family A LRX86_15435 PF01612 3'-5' exonuclease LRX86_15440 PF02325 YGGT family LRX86_15445 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRX86_15445 PF03807 NADP oxidoreductase coenzyme F420-dependent LRX86_15450 PF11734 TilS substrate C-terminal domain LRX86_15450 PF09179 TilS substrate binding domain LRX86_15450 PF01171 PP-loop family LRX86_15455 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LRX86_15460 PF02541 Ppx/GppA phosphatase family LRX86_15465 PF00085 Thioredoxin LRX86_15470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRX86_15470 PF07498 Rho termination factor, N-terminal domain LRX86_15470 PF07497 Rho termination factor, RNA-binding domain LRX86_15485 PF00216 Bacterial DNA-binding protein LRX86_15490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LRX86_15490 PF03147 Ferredoxin-fold anticodon binding domain LRX86_15490 PF03483 B3/4 domain LRX86_15490 PF03484 tRNA synthetase B5 domain LRX86_15490 PF01588 Putative tRNA binding domain LRX86_15495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LRX86_15495 PF01409 tRNA synthetases class II core domain (F) LRX86_15515 PF00453 Ribosomal protein L20 LRX86_15520 PF01632 Ribosomal protein L35 LRX86_15530 PF07690 Major Facilitator Superfamily LRX86_15535 PF09335 SNARE associated Golgi protein LRX86_15540 PF00043 Glutathione S-transferase, C-terminal domain LRX86_15540 PF02798 Glutathione S-transferase, N-terminal domain LRX86_15545 PF00707 Translation initiation factor IF-3, C-terminal domain LRX86_15545 PF05198 Translation initiation factor IF-3, N-terminal domain LRX86_15550 PF03129 Anticodon binding domain LRX86_15550 PF02824 TGS domain LRX86_15550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRX86_15550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRX86_15555 PF13193 AMP-binding enzyme C-terminal domain LRX86_15555 PF00501 AMP-binding enzyme LRX86_15560 PF04751 Protein of unknown function (DUF615) LRX86_15565 PF00381 PTS HPr component phosphorylation site LRX86_15570 PF03668 P-loop ATPase protein family LRX86_15575 PF02569 Pantoate-beta-alanine ligase LRX86_15580 PF02548 Ketopantoate hydroxymethyltransferase LRX86_15585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LRX86_15590 PF01743 Poly A polymerase head domain LRX86_15590 PF12626 Polymerase A arginine-rich C-terminus LRX86_15590 PF12627 Probable RNA and SrmB- binding site of polymerase A LRX86_15600 PF03819 MazG nucleotide pyrophosphohydrolase domain LRX86_15610 PF13291 ACT domain LRX86_15610 PF04607 Region found in RelA / SpoT proteins LRX86_15610 PF02824 TGS domain LRX86_15615 PF05958 tRNA (Uracil-5-)-methyltransferase LRX86_15625 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_15630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LRX86_15630 PF00072 Response regulator receiver domain LRX86_15630 PF01627 Hpt domain LRX86_15630 PF00512 His Kinase A (phospho-acceptor) domain LRX86_15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_15630 PF00672 HAMP domain LRX86_15635 PF00378 Enoyl-CoA hydratase/isomerase LRX86_15640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRX86_15640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRX86_15645 PF01261 Xylose isomerase-like TIM barrel LRX86_15655 PF00106 short chain dehydrogenase LRX86_15660 PF02233 NAD(P) transhydrogenase beta subunit LRX86_15665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LRX86_15670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LRX86_15670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LRX86_15675 PF00892 EamA-like transporter family LRX86_15685 PF07690 Major Facilitator Superfamily LRX86_15690 PF01207 Dihydrouridine synthase (Dus) LRX86_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_15700 PF03466 LysR substrate binding domain LRX86_15710 PF00899 ThiF family LRX86_15720 PF00330 Aconitase family (aconitate hydratase) LRX86_15720 PF00694 Aconitase C-terminal domain LRX86_15725 PF01026 TatD related DNase LRX86_15740 PF00009 Elongation factor Tu GTP binding domain LRX86_15740 PF03144 Elongation factor Tu domain 2 LRX86_15740 PF16658 Class II release factor RF3, C-terminal domain LRX86_15765 PF03707 Bacterial signalling protein N terminal repeat LRX86_15765 PF00990 Diguanylate cyclase, GGDEF domain LRX86_15765 PF00563 EAL domain LRX86_15770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LRX86_15770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LRX86_15775 PF10369 Small subunit of acetolactate synthase LRX86_15780 PF00205 Thiamine pyrophosphate enzyme, central domain LRX86_15780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRX86_15780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRX86_15790 PF09334 tRNA synthetases class I (M) LRX86_15790 PF08264 Anticodon-binding domain of tRNA LRX86_15790 PF13603 Leucyl-tRNA synthetase, Domain 2 LRX86_15790 PF00133 tRNA synthetases class I (I, L, M and V) LRX86_15805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRX86_15810 PF12704 MacB-like periplasmic core domain LRX86_15810 PF00005 ABC transporter LRX86_15810 PF02687 FtsX-like permease family LRX86_15815 PF02321 Outer membrane efflux protein LRX86_15830 PF00929 Exonuclease LRX86_15835 PF03193 RsgA GTPase LRX86_15845 PF00462 Glutaredoxin LRX86_15850 PF02556 Preprotein translocase subunit SecB LRX86_15860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LRX86_15860 PF01926 50S ribosome-binding GTPase LRX86_15865 PF13360 PQQ-like domain LRX86_15875 PF03129 Anticodon binding domain LRX86_15875 PF13393 Histidyl-tRNA synthetase LRX86_15880 PF04551 GcpE protein LRX86_15885 PF13464 Domain of unknown function (DUF4115) LRX86_15895 PF04055 Radical SAM superfamily LRX86_15900 PF00334 Nucleoside diphosphate kinase LRX86_15905 PF04384 Iron-sulphur cluster assembly LRX86_15910 PF01569 PAP2 superfamily LRX86_15915 PF00534 Glycosyl transferases group 1 LRX86_15915 PF13439 Glycosyltransferase Family 4 LRX86_15920 PF00595 PDZ domain LRX86_15920 PF03572 Peptidase family S41 LRX86_15920 PF17804 Tail specific protease N-terminal domain LRX86_15920 PF11818 C-terminal domain of tail specific protease (DUF3340) LRX86_15925 PF00933 Glycosyl hydrolase family 3 N terminal domain LRX86_15935 PF00561 alpha/beta hydrolase fold LRX86_15940 PF00171 Aldehyde dehydrogenase family LRX86_15945 PF00171 Aldehyde dehydrogenase family LRX86_15950 PF01202 Shikimate kinase LRX86_15955 PF02447 GntP family permease LRX86_15960 PF01081 KDPG and KHG aldolase LRX86_15965 PF00920 Dehydratase family LRX86_15970 PF00871 Acetokinase family LRX86_15975 PF07085 DRTGG domain LRX86_15975 PF01515 Phosphate acetyl/butaryl transferase LRX86_15980 PF05681 Fumarate hydratase (Fumerase) LRX86_15980 PF05683 Fumarase C-terminus LRX86_15995 PF10431 C-terminal, D2-small domain, of ClpB protein LRX86_15995 PF06689 ClpX C4-type zinc finger LRX86_15995 PF07724 AAA domain (Cdc48 subfamily) LRX86_16000 PF00574 Clp protease LRX86_16005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_16005 PF05698 Bacterial trigger factor protein (TF) C-terminus LRX86_16005 PF05697 Bacterial trigger factor protein (TF) LRX86_16010 PF07715 TonB-dependent Receptor Plug Domain LRX86_16010 PF00593 TonB dependent receptor LRX86_16015 PF18331 PKHD-type hydroxylase C-terminal domain LRX86_16015 PF13640 2OG-Fe(II) oxygenase superfamily LRX86_16020 PF00682 HMGL-like LRX86_16020 PF08502 LeuA allosteric (dimerisation) domain LRX86_16025 PF00561 alpha/beta hydrolase fold LRX86_16030 PF00561 alpha/beta hydrolase fold LRX86_16030 PF07021 Methionine biosynthesis protein MetW LRX86_16040 PF01725 Ham1 family LRX86_16050 PF02416 mttA/Hcf106 family LRX86_16055 PF02416 mttA/Hcf106 family LRX86_16060 PF00902 Sec-independent protein translocase protein (TatC) LRX86_16080 PF01790 Prolipoprotein diacylglyceryl transferase LRX86_16095 PF00303 Thymidylate synthase LRX86_16100 PF00186 Dihydrofolate reductase LRX86_16110 PF01625 Peptide methionine sulfoxide reductase LRX86_16120 PF01618 MotA/TolQ/ExbB proton channel family LRX86_16130 PF01842 ACT domain LRX86_16130 PF00551 Formyl transferase LRX86_16140 PF00171 Aldehyde dehydrogenase family LRX86_16145 PF00830 Ribosomal L28 family LRX86_16150 PF00471 Ribosomal protein L33 LRX86_16155 PF02254 TrkA-N domain LRX86_16155 PF00999 Sodium/hydrogen exchanger family LRX86_16175 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LRX86_16180 PF00580 UvrD/REP helicase N-terminal domain LRX86_16180 PF13361 UvrD-like helicase C-terminal domain LRX86_16195 PF08272 Topoisomerase I zinc-ribbon-like LRX86_16195 PF01131 DNA topoisomerase LRX86_16195 PF01751 Toprim domain LRX86_16195 PF01396 Topoisomerase DNA binding C4 zinc finger LRX86_16205 PF01638 HxlR-like helix-turn-helix LRX86_16210 PF08240 Alcohol dehydrogenase GroES-like domain LRX86_16210 PF00107 Zinc-binding dehydrogenase LRX86_16215 PF04102 SlyX LRX86_16220 PF16326 ABC transporter C-terminal domain LRX86_16220 PF00005 ABC transporter LRX86_16220 PF12848 ABC transporter LRX86_16230 PF01810 LysE type translocator LRX86_16235 PF03279 Bacterial lipid A biosynthesis acyltransferase LRX86_16245 PF00375 Sodium:dicarboxylate symporter family LRX86_16255 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRX86_16255 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRX86_16275 PF01416 tRNA pseudouridine synthase LRX86_16285 PF01176 Translation initiation factor 1A / IF-1 LRX86_16300 PF00180 Isocitrate/isopropylmalate dehydrogenase LRX86_16310 PF00694 Aconitase C-terminal domain LRX86_16315 PF00330 Aconitase family (aconitate hydratase) LRX86_16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_16325 PF03466 LysR substrate binding domain LRX86_16335 PF00293 NUDIX domain LRX86_16340 PF01590 GAF domain LRX86_16340 PF05524 PEP-utilising enzyme, N-terminal LRX86_16340 PF00391 PEP-utilising enzyme, mobile domain LRX86_16340 PF02896 PEP-utilising enzyme, TIM barrel domain LRX86_16345 PF00141 Peroxidase LRX86_16350 PF12706 Beta-lactamase superfamily domain LRX86_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_16355 PF03466 LysR substrate binding domain LRX86_16365 PF02798 Glutathione S-transferase, N-terminal domain LRX86_16370 PF08279 HTH domain LRX86_16370 PF13280 WYL domain LRX86_16375 PF13419 Haloacid dehalogenase-like hydrolase LRX86_16380 PF00849 RNA pseudouridylate synthase LRX86_16380 PF01479 S4 domain LRX86_16385 PF12111 Polyribonucleotide phosphorylase C terminal LRX86_16385 PF10150 Ribonuclease E/G family LRX86_16385 PF00575 S1 RNA binding domain LRX86_16390 PF00501 AMP-binding enzyme LRX86_16390 PF13193 AMP-binding enzyme C-terminal domain LRX86_16405 PF03466 LysR substrate binding domain LRX86_16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_16410 PF00106 short chain dehydrogenase LRX86_16415 PF04055 Radical SAM superfamily LRX86_16415 PF06969 HemN C-terminal domain LRX86_16425 PF01554 MatE LRX86_16430 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_16430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRX86_16430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_16435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_16435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRX86_16440 PF03109 ABC1 family LRX86_16445 PF01197 Ribosomal protein L31 LRX86_16455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LRX86_16465 PF13247 4Fe-4S dicluster domain LRX86_16465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LRX86_16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRX86_16475 PF03884 DNA gyrase inhibitor YacG LRX86_16480 PF00753 Metallo-beta-lactamase superfamily LRX86_16485 PF00762 Ferrochelatase LRX86_16495 PF01177 Asp/Glu/Hydantoin racemase LRX86_16515 PF01206 Sulfurtransferase TusA LRX86_16520 PF00571 CBS domain LRX86_16520 PF03471 Transporter associated domain LRX86_16525 PF00795 Carbon-nitrogen hydrolase LRX86_16530 PF01588 Putative tRNA binding domain LRX86_16540 PF07963 Prokaryotic N-terminal methylation motif LRX86_16540 PF08334 Type II secretion system (T2SS), protein G LRX86_16545 PF00482 Type II secretion system (T2SS), protein F LRX86_16550 PF00270 DEAD/DEAH box helicase LRX86_16550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LRX86_16550 PF18074 Primosomal protein N C-terminal domain LRX86_16550 PF17764 3′ DNA-binding domain (3′BD) LRX86_16550 PF00271 Helicase conserved C-terminal domain LRX86_16555 PF00999 Sodium/hydrogen exchanger family LRX86_16555 PF02254 TrkA-N domain LRX86_16560 PF01430 Hsp33 protein LRX86_16570 PF00226 DnaJ domain LRX86_16570 PF01556 DnaJ C terminal domain LRX86_16580 PF01544 CorA-like Mg2+ transporter protein LRX86_16585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LRX86_16585 PF01138 3' exoribonuclease family, domain 1 LRX86_16585 PF03725 3' exoribonuclease family, domain 2 LRX86_16585 PF00575 S1 RNA binding domain LRX86_16585 PF00013 KH domain LRX86_16590 PF00312 Ribosomal protein S15 LRX86_16595 PF00144 Beta-lactamase LRX86_16600 PF13538 UvrD-like helicase C-terminal domain LRX86_16605 PF13361 UvrD-like helicase C-terminal domain LRX86_16605 PF12705 PD-(D/E)XK nuclease superfamily LRX86_16605 PF00580 UvrD/REP helicase N-terminal domain LRX86_16610 PF17946 RecC C-terminal domain LRX86_16620 PF03976 Polyphosphate kinase 2 (PPK2) LRX86_16630 PF01209 ubiE/COQ5 methyltransferase family LRX86_16640 PF03109 ABC1 family LRX86_16645 PF01494 FAD binding domain LRX86_16650 PF01502 Phosphoribosyl-AMP cyclohydrolase LRX86_16665 PF13244 Domain of unknown function (DUF4040) LRX86_16665 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LRX86_16665 PF00361 Proton-conducting membrane transporter LRX86_16665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRX86_16670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LRX86_16675 PF00361 Proton-conducting membrane transporter LRX86_16680 PF01899 Na+/H+ ion antiporter subunit LRX86_16685 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LRX86_16690 PF03334 Na+/H+ antiporter subunit LRX86_16695 PF02033 Ribosome-binding factor A LRX86_16700 PF00009 Elongation factor Tu GTP binding domain LRX86_16700 PF11987 Translation-initiation factor 2 LRX86_16700 PF08364 Bacterial translation initiation factor IF-2 associated region LRX86_16700 PF04760 Translation initiation factor IF-2, N-terminal region LRX86_16705 PF13184 NusA-like KH domain LRX86_16705 PF08529 NusA N-terminal domain LRX86_16705 PF00575 S1 RNA binding domain LRX86_16710 PF02576 RimP N-terminal domain LRX86_16710 PF17384 RimP C-terminal SH3 domain LRX86_16730 PF03840 Preprotein translocase SecG subunit LRX86_16735 PF00121 Triosephosphate isomerase LRX86_16740 PF00437 Type II/IV secretion system protein LRX86_16740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LRX86_16745 PF00482 Type II secretion system (T2SS), protein F LRX86_16755 PF06750 Bacterial Peptidase A24 N-terminal domain LRX86_16755 PF01478 Type IV leader peptidase family LRX86_16760 PF01121 Dephospho-CoA kinase LRX86_16770 PF00588 SpoU rRNA Methylase family LRX86_16770 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRX86_16775 PF06865 Pyrimidine/purine nucleoside phosphorylase LRX86_16785 PF02463 RecF/RecN/SMC N terminal domain LRX86_16790 PF02622 Uncharacterized ACR, COG1678 LRX86_16795 PF03652 Holliday junction resolvase LRX86_16800 PF13533 Biotin-lipoyl like LRX86_16825 PF02805 Metal binding domain of Ada LRX86_16825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRX86_16825 PF12833 Helix-turn-helix domain LRX86_16825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRX86_16830 PF01066 CDP-alcohol phosphatidyltransferase LRX86_16840 PF01541 GIY-YIG catalytic domain LRX86_16840 PF08459 UvrC Helix-hairpin-helix N-terminal LRX86_16840 PF02151 UvrB/uvrC motif LRX86_16865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRX86_16865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRX86_16865 PF00378 Enoyl-CoA hydratase/isomerase LRX86_16870 PF02803 Thiolase, C-terminal domain LRX86_16870 PF00108 Thiolase, N-terminal domain LRX86_16890 PF09278 MerR, DNA binding LRX86_16890 PF00376 MerR family regulatory protein LRX86_16900 PF01323 DSBA-like thioredoxin domain LRX86_16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_16915 PF00183 Hsp90 protein LRX86_16930 PF13726 Na+-H+ antiporter family LRX86_16930 PF03553 Na+/H+ antiporter family LRX86_16955 PF05000 RNA polymerase Rpb1, domain 4 LRX86_16955 PF04998 RNA polymerase Rpb1, domain 5 LRX86_16955 PF00623 RNA polymerase Rpb1, domain 2 LRX86_16955 PF04997 RNA polymerase Rpb1, domain 1 LRX86_16955 PF04983 RNA polymerase Rpb1, domain 3 LRX86_16960 PF04560 RNA polymerase Rpb2, domain 7 LRX86_16960 PF00562 RNA polymerase Rpb2, domain 6 LRX86_16960 PF10385 RNA polymerase beta subunit external 1 domain LRX86_16960 PF04565 RNA polymerase Rpb2, domain 3 LRX86_16960 PF04561 RNA polymerase Rpb2, domain 2 LRX86_16960 PF04563 RNA polymerase beta subunit LRX86_16965 PF00542 Ribosomal protein L7/L12 C-terminal domain LRX86_16965 PF16320 Ribosomal protein L7/L12 dimerisation domain LRX86_16970 PF00466 Ribosomal protein L10 LRX86_16975 PF00687 Ribosomal protein L1p/L10e family LRX86_16980 PF00298 Ribosomal protein L11, RNA binding domain LRX86_16980 PF03946 Ribosomal protein L11, N-terminal domain LRX86_16985 PF00467 KOW motif LRX86_16985 PF02357 Transcription termination factor nusG LRX86_16990 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LRX86_17000 PF03143 Elongation factor Tu C-terminal domain LRX86_17000 PF03144 Elongation factor Tu domain 2 LRX86_17000 PF00009 Elongation factor Tu GTP binding domain LRX86_17025 PF04715 Anthranilate synthase component I, N terminal region LRX86_17025 PF00425 chorismate binding enzyme LRX86_17030 PF13419 Haloacid dehalogenase-like hydrolase LRX86_17035 PF12401 Protein of unknown function (DUF2662) LRX86_17035 PF00498 FHA domain LRX86_17040 PF00263 Bacterial type II and III secretion system protein LRX86_17040 PF03958 Bacterial type II/III secretion system short domain LRX86_17055 PF00816 H-NS histone family LRX86_17080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LRX86_17080 PF03900 Porphobilinogen deaminase, C-terminal domain LRX86_17085 PF04397 LytTr DNA-binding domain LRX86_17085 PF00072 Response regulator receiver domain LRX86_17090 PF07694 5TMR of 5TMR-LYT LRX86_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_17090 PF06580 Histidine kinase LRX86_17095 PF00206 Lyase LRX86_17095 PF14698 Argininosuccinate lyase C-terminal LRX86_17100 PF04362 Bacterial Fe(2+) trafficking LRX86_17105 PF01895 PhoU domain LRX86_17110 PF02321 Outer membrane efflux protein LRX86_17115 PF00892 EamA-like transporter family LRX86_17130 PF13667 ThiC-associated domain LRX86_17130 PF01964 Radical SAM ThiC family LRX86_17135 PF00293 NUDIX domain LRX86_17140 PF00149 Calcineurin-like phosphoesterase LRX86_17145 PF01258 Prokaryotic dksA/traR C4-type zinc finger LRX86_17150 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRX86_17155 PF01098 Cell cycle protein LRX86_17160 PF02875 Mur ligase family, glutamate ligase domain LRX86_17160 PF08245 Mur ligase middle domain LRX86_17170 PF02421 Ferrous iron transport protein B LRX86_17170 PF07664 Ferrous iron transport protein B C terminus LRX86_17170 PF07670 Nucleoside recognition LRX86_17180 PF02899 Phage integrase, N-terminal SAM-like domain LRX86_17180 PF00589 Phage integrase family LRX86_17185 PF10411 Disulfide bond isomerase protein N-terminus LRX86_17185 PF13098 Thioredoxin-like domain LRX86_17190 PF01842 ACT domain LRX86_17190 PF00742 Homoserine dehydrogenase LRX86_17190 PF03447 Homoserine dehydrogenase, NAD binding domain LRX86_17195 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_17200 PF00768 D-alanyl-D-alanine carboxypeptidase LRX86_17205 PF00196 Bacterial regulatory proteins, luxR family LRX86_17205 PF00072 Response regulator receiver domain LRX86_17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRX86_17210 PF00512 His Kinase A (phospho-acceptor) domain LRX86_17215 PF02954 Bacterial regulatory protein, Fis family LRX86_17215 PF00072 Response regulator receiver domain LRX86_17215 PF00158 Sigma-54 interaction domain LRX86_17220 PF00595 PDZ domain LRX86_17220 PF03572 Peptidase family S41 LRX86_17225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LRX86_17225 PF01676 Metalloenzyme superfamily LRX86_17230 PF03739 Lipopolysaccharide export system permease LptF/LptG LRX86_17240 PF00883 Cytosol aminopeptidase family, catalytic domain LRX86_17240 PF02789 Cytosol aminopeptidase family, N-terminal domain LRX86_17260 PF00677 Lumazine binding domain LRX86_17270 PF01872 RibD C-terminal domain LRX86_17270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRX86_17275 PF03477 ATP cone domain LRX86_17280 PF00909 Ammonium Transporter Family LRX86_17285 PF00543 Nitrogen regulatory protein P-II LRX86_17295 PF01078 Magnesium chelatase, subunit ChlI LRX86_17295 PF13335 Magnesium chelatase, subunit ChlI C-terminal LRX86_17305 PF00596 Class II Aldolase and Adducin N-terminal domain LRX86_17310 PF00701 Dihydrodipicolinate synthetase family LRX86_17320 PF03573 outer membrane porin, OprD family LRX86_17325 PF00719 Inorganic pyrophosphatase LRX86_17340 PF00501 AMP-binding enzyme LRX86_17340 PF13193 AMP-binding enzyme C-terminal domain LRX86_17345 PF03989 DNA gyrase C-terminal domain, beta-propeller LRX86_17345 PF00521 DNA gyrase/topoisomerase IV, subunit A LRX86_17350 PF07690 Major Facilitator Superfamily LRX86_17355 PF03458 UPF0126 domain LRX86_17360 PF02810 SEC-C motif LRX86_17365 PF03741 Integral membrane protein TerC family LRX86_17365 PF03471 Transporter associated domain LRX86_17370 PF03641 Possible lysine decarboxylase LRX86_17375 PF07690 Major Facilitator Superfamily LRX86_17385 PF00817 impB/mucB/samB family LRX86_17385 PF11799 impB/mucB/samB family C-terminal domain LRX86_17385 PF11798 IMS family HHH motif LRX86_17405 PF11842 Domain of unknown function (DUF3362) LRX86_17405 PF04055 Radical SAM superfamily LRX86_17405 PF08497 Radical SAM N-terminal LRX86_17425 PF03358 NADPH-dependent FMN reductase LRX86_17435 PF00291 Pyridoxal-phosphate dependent enzyme LRX86_17485 PF07715 TonB-dependent Receptor Plug Domain LRX86_17485 PF00593 TonB dependent receptor LRX86_17495 PF01327 Polypeptide deformylase LRX86_17505 PF17782 DprA winged helix domain LRX86_17505 PF02481 DNA recombination-mediator protein A LRX86_17510 PF01300 Telomere recombination LRX86_17515 PF00892 EamA-like transporter family LRX86_17520 PF00440 Bacterial regulatory proteins, tetR family LRX86_17525 PF07690 Major Facilitator Superfamily LRX86_17535 PF00255 Glutathione peroxidase LRX86_17545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LRX86_17550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRX86_17550 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRX86_17555 PF00231 ATP synthase LRX86_17560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRX86_17560 PF00306 ATP synthase alpha/beta chain, C terminal domain LRX86_17560 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRX86_17565 PF00213 ATP synthase delta (OSCP) subunit LRX86_17570 PF00430 ATP synthase B/B' CF(0) LRX86_17575 PF00137 ATP synthase subunit C LRX86_17580 PF00119 ATP synthase A chain LRX86_17600 PF00005 ABC transporter LRX86_17605 PF00950 ABC 3 transport family LRX86_17610 PF01810 LysE type translocator LRX86_17615 PF04261 Dyp-type peroxidase family LRX86_17620 PF00390 Malic enzyme, N-terminal domain LRX86_17620 PF03949 Malic enzyme, NAD binding domain LRX86_17625 PF03485 Arginyl tRNA synthetase N terminal domain LRX86_17625 PF05746 DALR anticodon binding domain LRX86_17625 PF00750 tRNA synthetases class I (R) LRX86_17645 PF05726 Pirin C-terminal cupin domain LRX86_17645 PF02678 Pirin LRX86_17655 PF03551 Transcriptional regulator PadR-like family LRX86_17660 PF01909 Nucleotidyltransferase domain LRX86_17660 PF13427 Domain of unknown function (DUF4111) LRX86_17665 PF00117 Glutamine amidotransferase class-I LRX86_17665 PF00958 GMP synthase C terminal domain LRX86_17665 PF02540 NAD synthase LRX86_17670 PF04286 Protein of unknown function (DUF445) LRX86_17675 PF07681 DoxX LRX86_17680 PF09335 SNARE associated Golgi protein LRX86_17695 PF13614 AAA domain LRX86_17705 PF01722 BolA-like protein LRX86_17720 PF01648 4'-phosphopantetheinyl transferase superfamily LRX86_17725 PF16363 GDP-mannose 4,6 dehydratase LRX86_17740 PF00501 AMP-binding enzyme LRX86_17740 PF13193 AMP-binding enzyme C-terminal domain LRX86_17740 PF00668 Condensation domain LRX86_17740 PF00550 Phosphopantetheine attachment site LRX86_17740 PF00975 Thioesterase domain LRX86_17745 PF14765 Polyketide synthase dehydratase LRX86_17745 PF16197 Ketoacyl-synthetase C-terminal extension LRX86_17745 PF00109 Beta-ketoacyl synthase, N-terminal domain LRX86_17745 PF02801 Beta-ketoacyl synthase, C-terminal domain LRX86_17745 PF08242 Methyltransferase domain LRX86_17745 PF00975 Thioesterase domain LRX86_17745 PF00550 Phosphopantetheine attachment site LRX86_17750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_17750 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_17750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_17755 PF00501 AMP-binding enzyme LRX86_17760 PF00196 Bacterial regulatory proteins, luxR family LRX86_17760 PF03472 Autoinducer binding domain LRX86_17770 PF00765 Autoinducer synthase LRX86_17775 PF07690 Major Facilitator Superfamily LRX86_17775 PF00083 Sugar (and other) transporter LRX86_17780 PF00378 Enoyl-CoA hydratase/isomerase LRX86_17785 PF00378 Enoyl-CoA hydratase/isomerase LRX86_17790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRX86_17790 PF02770 Acyl-CoA dehydrogenase, middle domain LRX86_17790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRX86_17795 PF13193 AMP-binding enzyme C-terminal domain LRX86_17795 PF00501 AMP-binding enzyme LRX86_17800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRX86_17800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRX86_17805 PF00171 Aldehyde dehydrogenase family LRX86_17815 PF00324 Amino acid permease LRX86_17825 PF01042 Endoribonuclease L-PSP LRX86_17830 PF01168 Alanine racemase, N-terminal domain LRX86_17830 PF00842 Alanine racemase, C-terminal domain LRX86_17835 PF01266 FAD dependent oxidoreductase LRX86_17840 PF01037 Lrp/AsnC ligand binding domain LRX86_17850 PF00593 TonB dependent receptor LRX86_17850 PF07715 TonB-dependent Receptor Plug Domain LRX86_17865 PF00849 RNA pseudouridylate synthase LRX86_17935 PF00330 Aconitase family (aconitate hydratase) LRX86_17935 PF00694 Aconitase C-terminal domain LRX86_17940 PF00285 Citrate synthase, C-terminal domain LRX86_17950 PF07729 FCD domain LRX86_17950 PF00392 Bacterial regulatory proteins, gntR family LRX86_17960 PF00155 Aminotransferase class I and II LRX86_17965 PF01565 FAD binding domain LRX86_17965 PF09330 D-lactate dehydrogenase, membrane binding LRX86_17970 PF01070 FMN-dependent dehydrogenase LRX86_17975 PF00392 Bacterial regulatory proteins, gntR family LRX86_17975 PF07729 FCD domain LRX86_17980 PF02652 L-lactate permease LRX86_17985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRX86_17985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRX86_17985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRX86_17985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRX86_17995 PF16363 GDP-mannose 4,6 dehydratase LRX86_18000 PF00342 Phosphoglucose isomerase LRX86_18005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRX86_18005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRX86_18005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRX86_18010 PF00483 Nucleotidyl transferase LRX86_18015 PF02397 Bacterial sugar transferase LRX86_18020 PF00534 Glycosyl transferases group 1 LRX86_18020 PF13477 Glycosyl transferase 4-like LRX86_18025 PF13439 Glycosyltransferase Family 4 LRX86_18025 PF00534 Glycosyl transferases group 1 LRX86_18035 PF13439 Glycosyltransferase Family 4 LRX86_18035 PF00534 Glycosyl transferases group 1 LRX86_18040 PF00535 Glycosyl transferase family 2 LRX86_18050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRX86_18050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRX86_18050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRX86_18055 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LRX86_18055 PF02563 Polysaccharide biosynthesis/export protein LRX86_18055 PF10531 SLBB domain LRX86_18060 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRX86_18065 PF02706 Chain length determinant protein LRX86_18065 PF13807 G-rich domain on putative tyrosine kinase LRX86_18065 PF13614 AAA domain LRX86_18070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LRX86_18070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_18075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LRX86_18075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_18080 PF03023 Lipid II flippase MurJ LRX86_18085 PF01510 N-acetylmuramoyl-L-alanine amidase LRX86_18090 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LRX86_18090 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LRX86_18100 PF04185 Phosphoesterase family LRX86_18100 PF05506 Domain of unknown function (DUF756) LRX86_18105 PF01138 3' exoribonuclease family, domain 1 LRX86_18105 PF03725 3' exoribonuclease family, domain 2 LRX86_18110 PF00487 Fatty acid desaturase LRX86_18115 PF00175 Oxidoreductase NAD-binding domain LRX86_18120 PF00440 Bacterial regulatory proteins, tetR family LRX86_18125 PF08360 QacR-like protein, C-terminal region LRX86_18125 PF00440 Bacterial regulatory proteins, tetR family LRX86_18130 PF01323 DSBA-like thioredoxin domain LRX86_18140 PF13419 Haloacid dehalogenase-like hydrolase LRX86_18145 PF00106 short chain dehydrogenase LRX86_18160 PF00583 Acetyltransferase (GNAT) family LRX86_18160 PF00696 Amino acid kinase family LRX86_18180 PF09084 NMT1/THI5 like LRX86_18185 PF00296 Luciferase-like monooxygenase LRX86_18190 PF00528 Binding-protein-dependent transport system inner membrane component LRX86_18195 PF00005 ABC transporter LRX86_18200 PF08362 YcdC-like protein, C-terminal region LRX86_18200 PF00440 Bacterial regulatory proteins, tetR family LRX86_18205 PF01048 Phosphorylase superfamily LRX86_18215 PF01687 Riboflavin kinase LRX86_18215 PF06574 FAD synthetase LRX86_18220 PF00133 tRNA synthetases class I (I, L, M and V) LRX86_18220 PF06827 Zinc finger found in FPG and IleRS LRX86_18220 PF08264 Anticodon-binding domain of tRNA LRX86_18225 PF01252 Signal peptidase (SPase) II LRX86_18230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRX86_18270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRX86_18275 PF07859 alpha/beta hydrolase fold LRX86_18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRX86_18295 PF03466 LysR substrate binding domain LRX86_18300 PF01025 GrpE LRX86_18305 PF00012 Hsp70 protein LRX86_18325 PF13406 Transglycosylase SLT domain LRX86_18330 PF02222 ATP-grasp domain LRX86_18330 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LRX86_18335 PF00731 AIR carboxylase LRX86_18345 PF02875 Mur ligase family, glutamate ligase domain LRX86_18345 PF08245 Mur ligase middle domain LRX86_18345 PF01225 Mur ligase family, catalytic domain LRX86_18355 PF01569 PAP2 superfamily LRX86_18360 PF03741 Integral membrane protein TerC family LRX86_18370 PF03738 Glutathionylspermidine synthase preATP-grasp LRX86_18375 PF00355 Rieske [2Fe-2S] domain LRX86_18380 PF01979 Amidohydrolase family LRX86_18385 PF00156 Phosphoribosyl transferase domain LRX86_18395 PF10411 Disulfide bond isomerase protein N-terminus LRX86_18395 PF13098 Thioredoxin-like domain LRX86_18400 PF01545 Cation efflux family LRX86_18400 PF16916 Dimerisation domain of Zinc Transporter LRX86_18405 PF02583 Metal-sensitive transcriptional repressor LRX86_18410 PF10396 GTP-binding protein TrmE N-terminus LRX86_18410 PF12631 MnmE helical domain LRX86_18410 PF01926 50S ribosome-binding GTPase LRX86_18415 PF02096 60Kd inner membrane protein LRX86_18415 PF14849 YidC periplasmic domain LRX86_18420 PF01809 Putative membrane protein insertion efficiency factor LRX86_18425 PF00825 Ribonuclease P LRX86_18430 PF00468 Ribosomal protein L34 LRX86_18465 PF07715 TonB-dependent Receptor Plug Domain LRX86_18465 PF00593 TonB dependent receptor LRX86_18480 PF01850 PIN domain LRX86_18485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LRX86_18490 PF13302 Acetyltransferase (GNAT) domain