locus-tag class description HFD79_00005 PF11638 DnaA N-terminal domain HFD79_00005 PF08299 Bacterial dnaA protein helix-turn-helix HFD79_00005 PF00308 Bacterial dnaA protein HFD79_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HFD79_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HFD79_00010 PF02767 DNA polymerase III beta subunit, central domain HFD79_00015 PF02463 RecF/RecN/SMC N terminal domain HFD79_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_00020 PF01751 Toprim domain HFD79_00020 PF18053 DNA gyrase B subunit insert domain HFD79_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HFD79_00020 PF00204 DNA gyrase B HFD79_00030 PF09335 SNARE associated Golgi protein HFD79_00035 PF00005 ABC transporter HFD79_00035 PF12848 ABC transporter HFD79_00055 PF01521 Iron-sulphur cluster biosynthesis HFD79_00060 PF00561 alpha/beta hydrolase fold HFD79_00065 PF03702 Anhydro-N-acetylmuramic acid kinase HFD79_00070 PF00579 tRNA synthetases class I (W and Y) HFD79_00115 PF00209 Sodium:neurotransmitter symporter family HFD79_00125 PF01029 NusB family HFD79_00125 PF01189 16S rRNA methyltransferase RsmB/F HFD79_00130 PF00551 Formyl transferase HFD79_00130 PF02911 Formyl transferase, C-terminal domain HFD79_00135 PF00920 Dehydratase family HFD79_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_00150 PF03466 LysR substrate binding domain HFD79_00155 PF00860 Permease family HFD79_00160 PF00311 Phosphoenolpyruvate carboxylase HFD79_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region HFD79_00165 PF00440 Bacterial regulatory proteins, tetR family HFD79_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_00175 PF00873 AcrB/AcrD/AcrF family HFD79_00185 PF00226 DnaJ domain HFD79_00185 PF00684 DnaJ central domain HFD79_00185 PF01556 DnaJ C terminal domain HFD79_00195 PF05173 Dihydrodipicolinate reductase, C-terminus HFD79_00195 PF01113 Dihydrodipicolinate reductase, N-terminus HFD79_00205 PF07690 Major Facilitator Superfamily HFD79_00210 PF00248 Aldo/keto reductase family HFD79_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_00215 PF03466 LysR substrate binding domain HFD79_00230 PF00155 Aminotransferase class I and II HFD79_00230 PF00392 Bacterial regulatory proteins, gntR family HFD79_00235 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_00235 PF00107 Zinc-binding dehydrogenase HFD79_00240 PF03352 Methyladenine glycosylase HFD79_00255 PF14815 NUDIX domain HFD79_00255 PF00633 Helix-hairpin-helix motif HFD79_00255 PF10576 Iron-sulfur binding domain of endonuclease III HFD79_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein HFD79_00270 PF07043 Protein of unknown function (DUF1328) HFD79_00275 PF03692 Putative zinc- or iron-chelating domain HFD79_00280 PF07995 Glucose / Sorbosone dehydrogenase HFD79_00285 PF16193 AAA C-terminal domain HFD79_00285 PF12002 MgsA AAA+ ATPase C terminal HFD79_00285 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_00290 PF01226 Formate/nitrite transporter HFD79_00300 PF01259 SAICAR synthetase HFD79_00310 PF00701 Dihydrodipicolinate synthetase family HFD79_00315 PF00857 Isochorismatase family HFD79_00320 PF01758 Sodium Bile acid symporter family HFD79_00325 PF01554 MatE HFD79_00330 PF04463 Protein of unknown function (DUF523) HFD79_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HFD79_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HFD79_00350 PF14497 Glutathione S-transferase, C-terminal domain HFD79_00350 PF02798 Glutathione S-transferase, N-terminal domain HFD79_00360 PF00324 Amino acid permease HFD79_00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain HFD79_00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain HFD79_00380 PF07702 UTRA domain HFD79_00380 PF00392 Bacterial regulatory proteins, gntR family HFD79_00385 PF05962 HutD HFD79_00390 PF01175 Urocanase Rossmann-like domain HFD79_00390 PF17392 Urocanase C-terminal domain HFD79_00390 PF17391 Urocanase N-terminal domain HFD79_00395 PF00221 Aromatic amino acid lyase HFD79_00400 PF00324 Amino acid permease HFD79_00405 PF01979 Amidohydrolase family HFD79_00410 PF00491 Arginase family HFD79_00425 PF01177 Asp/Glu/Hydantoin racemase HFD79_00430 PF01380 SIS domain HFD79_00435 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_00435 PF14602 Hexapeptide repeat of succinyl-transferase HFD79_00435 PF12804 MobA-like NTP transferase domain HFD79_00440 PF04608 Phosphatidylglycerophosphatase A HFD79_00445 PF02769 AIR synthase related protein, C-terminal domain HFD79_00445 PF00586 AIR synthase related protein, N-terminal domain HFD79_00450 PF01029 NusB family HFD79_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase HFD79_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HFD79_00460 PF00925 GTP cyclohydrolase II HFD79_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase HFD79_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HFD79_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HFD79_00495 PF00581 Rhodanese-like domain HFD79_00500 PF02666 Phosphatidylserine decarboxylase HFD79_00505 PF03069 Acetamidase/Formamidase family HFD79_00525 PF00512 His Kinase A (phospho-acceptor) domain HFD79_00525 PF00989 PAS fold HFD79_00525 PF11808 Phosphate regulon sensor protein PhoR HFD79_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_00530 PF00486 Transcriptional regulatory protein, C terminal HFD79_00530 PF00072 Response regulator receiver domain HFD79_00540 PF00106 short chain dehydrogenase HFD79_00545 PF01554 MatE HFD79_00550 PF00155 Aminotransferase class I and II HFD79_00555 PF04286 Protein of unknown function (DUF445) HFD79_00570 PF04262 Glutamate-cysteine ligase HFD79_00575 PF02600 Disulfide bond formation protein DsbB HFD79_00580 PF04717 Type VI secretion system, phage-baseplate injector HFD79_00585 PF01476 LysM domain HFD79_00585 PF00877 NlpC/P60 family HFD79_00600 PF05728 Uncharacterised protein family (UPF0227) HFD79_00605 PF01751 Toprim domain HFD79_00605 PF00986 DNA gyrase B subunit, carboxyl terminus HFD79_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_00605 PF00204 DNA gyrase B HFD79_00610 PF00106 short chain dehydrogenase HFD79_00615 PF04115 Ureidoglycolate lyase HFD79_00620 PF03561 Allantoicase repeat HFD79_00625 PF01494 FAD binding domain HFD79_00635 PF00860 Permease family HFD79_00640 PF00576 HIUase/Transthyretin family HFD79_00670 PF11412 Disulphide bond corrector protein DsbC HFD79_00670 PF02683 Cytochrome C biogenesis protein transmembrane region HFD79_00675 PF07694 5TMR of 5TMR-LYT HFD79_00675 PF00990 Diguanylate cyclase, GGDEF domain HFD79_00680 PF07859 alpha/beta hydrolase fold HFD79_00690 PF03960 ArsC family HFD79_00695 PF03372 Endonuclease/Exonuclease/phosphatase family HFD79_00700 PF00156 Phosphoribosyl transferase domain HFD79_00705 PF07715 TonB-dependent Receptor Plug Domain HFD79_00705 PF00593 TonB dependent receptor HFD79_00715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HFD79_00715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HFD79_00720 PF03033 Glycosyltransferase family 28 N-terminal domain HFD79_00720 PF04101 Glycosyltransferase family 28 C-terminal domain HFD79_00725 PF08245 Mur ligase middle domain HFD79_00725 PF02875 Mur ligase family, glutamate ligase domain HFD79_00725 PF01225 Mur ligase family, catalytic domain HFD79_00730 PF07478 D-ala D-ala ligase C-terminus HFD79_00730 PF01820 D-ala D-ala ligase N-terminus HFD79_00735 PF03799 Cell division protein FtsQ HFD79_00735 PF08478 POTRA domain, FtsQ-type HFD79_00740 PF02491 SHS2 domain inserted in FTSA HFD79_00745 PF00091 Tubulin/FtsZ family, GTPase domain HFD79_00745 PF12327 FtsZ family, C-terminal domain HFD79_00750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HFD79_00760 PF01551 Peptidase family M23 HFD79_00765 PF17831 Pyruvate dehydrogenase E1 component middle domain HFD79_00765 PF00456 Transketolase, thiamine diphosphate binding domain HFD79_00770 PF02817 e3 binding domain HFD79_00770 PF00364 Biotin-requiring enzyme HFD79_00770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HFD79_00780 PF01169 Uncharacterized protein family UPF0016 HFD79_00790 PF03050 Transposase IS66 family HFD79_00790 PF13817 IS66 C-terminal element HFD79_00790 PF13007 Transposase C of IS166 homeodomain HFD79_00790 PF13005 zinc-finger binding domain of transposase IS66 HFD79_00810 PF01613 Flavin reductase like domain HFD79_00810 PF00258 Flavodoxin HFD79_00815 PF03692 Putative zinc- or iron-chelating domain HFD79_00820 PF00571 CBS domain HFD79_00820 PF00478 IMP dehydrogenase / GMP reductase domain HFD79_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HFD79_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HFD79_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HFD79_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HFD79_00830 PF01243 Pyridoxamine 5'-phosphate oxidase HFD79_00830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HFD79_00835 PF17768 RecJ OB domain HFD79_00835 PF02272 DHHA1 domain HFD79_00835 PF01368 DHH family HFD79_00855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_00860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HFD79_00865 PF04452 RNA methyltransferase HFD79_00870 PF00924 Mechanosensitive ion channel HFD79_00880 PF00501 AMP-binding enzyme HFD79_00880 PF16177 Acetyl-coenzyme A synthetase N-terminus HFD79_00880 PF13193 AMP-binding enzyme C-terminal domain HFD79_00885 PF00857 Isochorismatase family HFD79_00890 PF01037 Lrp/AsnC ligand binding domain HFD79_00895 PF00872 Transposase, Mutator family HFD79_00900 PF00296 Luciferase-like monooxygenase HFD79_00905 PF03358 NADPH-dependent FMN reductase HFD79_00910 PF00072 Response regulator receiver domain HFD79_00910 PF00196 Bacterial regulatory proteins, luxR family HFD79_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_00920 PF00072 Response regulator receiver domain HFD79_00920 PF01627 Hpt domain HFD79_00920 PF00512 His Kinase A (phospho-acceptor) domain HFD79_00920 PF00672 HAMP domain HFD79_00925 PF04341 Protein of unknown function, DUF485 HFD79_00930 PF00474 Sodium:solute symporter family HFD79_00940 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_00950 PF17158 Membrane-associated sensor, integral membrane domain HFD79_00950 PF00990 Diguanylate cyclase, GGDEF domain HFD79_00960 PF00005 ABC transporter HFD79_00960 PF17755 UvrA DNA-binding domain HFD79_00960 PF17760 UvrA interaction domain HFD79_00965 PF00440 Bacterial regulatory proteins, tetR family HFD79_00965 PF16925 Tetracyclin repressor-like, C-terminal domain HFD79_00970 PF00107 Zinc-binding dehydrogenase HFD79_00970 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_00980 PF06942 GlpM protein HFD79_00985 PF08543 Phosphomethylpyrimidine kinase HFD79_00985 PF03070 TENA/THI-4/PQQC family HFD79_00985 PF02581 Thiamine monophosphate synthase HFD79_00995 PF07690 Major Facilitator Superfamily HFD79_01000 PF00436 Single-strand binding protein family HFD79_01010 PF03591 AzlC protein HFD79_01020 PF00324 Amino acid permease HFD79_01025 PF00392 Bacterial regulatory proteins, gntR family HFD79_01025 PF00155 Aminotransferase class I and II HFD79_01030 PF00202 Aminotransferase class-III HFD79_01035 PF00171 Aldehyde dehydrogenase family HFD79_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_01045 PF00857 Isochorismatase family HFD79_01050 PF05726 Pirin C-terminal cupin domain HFD79_01050 PF02678 Pirin HFD79_01070 PF10544 T5orf172 domain HFD79_01075 PF13614 AAA domain HFD79_01095 PF00905 Penicillin binding protein transpeptidase domain HFD79_01125 PF07690 Major Facilitator Superfamily HFD79_01130 PF03466 LysR substrate binding domain HFD79_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_01150 PF00248 Aldo/keto reductase family HFD79_01155 PF12833 Helix-turn-helix domain HFD79_01155 PF02311 AraC-like ligand binding domain HFD79_01180 PF01638 HxlR-like helix-turn-helix HFD79_01185 PF02525 Flavodoxin-like fold HFD79_01205 PF02705 K+ potassium transporter HFD79_01230 PF00230 Major intrinsic protein HFD79_01245 PF00977 Histidine biosynthesis protein HFD79_01250 PF01636 Phosphotransferase enzyme family HFD79_01265 PF03992 Antibiotic biosynthesis monooxygenase HFD79_01280 PF00977 Histidine biosynthesis protein HFD79_01295 PF00117 Glutamine amidotransferase class-I HFD79_01300 PF00475 Imidazoleglycerol-phosphate dehydratase HFD79_01320 PF00583 Acetyltransferase (GNAT) family HFD79_01325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HFD79_01325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HFD79_01335 PF00512 His Kinase A (phospho-acceptor) domain HFD79_01335 PF00672 HAMP domain HFD79_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_01340 PF00486 Transcriptional regulatory protein, C terminal HFD79_01340 PF00072 Response regulator receiver domain HFD79_01345 PF16921 Tex protein YqgF-like domain HFD79_01345 PF00575 S1 RNA binding domain HFD79_01345 PF09371 Tex-like protein N-terminal domain HFD79_01345 PF17674 HHH domain HFD79_01350 PF00916 Sulfate permease family HFD79_01350 PF01740 STAS domain HFD79_01355 PF00106 short chain dehydrogenase HFD79_01360 PF01053 Cys/Met metabolism PLP-dependent enzyme HFD79_01365 PF00005 ABC transporter HFD79_01365 PF12848 ABC transporter HFD79_01390 PF04191 Phospholipid methyltransferase HFD79_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_01410 PF00529 HlyD membrane-fusion protein of T1SS HFD79_01415 PF00873 AcrB/AcrD/AcrF family HFD79_01420 PF01545 Cation efflux family HFD79_01450 PF00324 Amino acid permease HFD79_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain HFD79_01480 PF01795 MraW methylase family HFD79_01490 PF03717 Penicillin-binding Protein dimerisation domain HFD79_01490 PF00905 Penicillin binding protein transpeptidase domain HFD79_01495 PF01225 Mur ligase family, catalytic domain HFD79_01495 PF02875 Mur ligase family, glutamate ligase domain HFD79_01495 PF08245 Mur ligase middle domain HFD79_01500 PF02875 Mur ligase family, glutamate ligase domain HFD79_01500 PF08245 Mur ligase middle domain HFD79_01500 PF01225 Mur ligase family, catalytic domain HFD79_01505 PF00953 Glycosyl transferase family 4 HFD79_01515 PF13847 Methyltransferase domain HFD79_01520 PF00912 Transglycosylase HFD79_01520 PF17092 Penicillin-binding protein OB-like domain HFD79_01520 PF00905 Penicillin binding protein transpeptidase domain HFD79_01545 PF11741 AMIN domain HFD79_01545 PF00263 Bacterial type II and III secretion system protein HFD79_01545 PF07660 Secretin and TonB N terminus short domain HFD79_01545 PF03958 Bacterial type II/III secretion system short domain HFD79_01550 PF01202 Shikimate kinase HFD79_01555 PF01761 3-dehydroquinate synthase HFD79_01565 PF01645 Conserved region in glutamate synthase HFD79_01565 PF01493 GXGXG motif HFD79_01565 PF04898 Glutamate synthase central domain HFD79_01565 PF00310 Glutamine amidotransferases class-II HFD79_01570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HFD79_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_01580 PF04011 LemA family HFD79_01585 PF04536 TPM domain HFD79_01595 PF00114 Pilin (bacterial filament) HFD79_01595 PF07963 Prokaryotic N-terminal methylation motif HFD79_01605 PF04932 O-Antigen ligase HFD79_01605 PF11846 Virulence factor membrane-bound polymerase, C-terminal HFD79_01605 PF15864 Protein glycosylation ligase HFD79_01610 PF00210 Ferritin-like domain HFD79_01615 PF04324 BFD-like [2Fe-2S] binding domain HFD79_01620 PF01042 Endoribonuclease L-PSP HFD79_01625 PF13291 ACT domain HFD79_01625 PF02824 TGS domain HFD79_01625 PF04607 Region found in RelA / SpoT proteins HFD79_01635 PF01192 RNA polymerase Rpb6 HFD79_01640 PF00625 Guanylate kinase HFD79_01645 PF02401 LytB protein HFD79_01685 PF00886 Ribosomal protein S16 HFD79_01690 PF01782 RimM N-terminal domain HFD79_01690 PF05239 PRC-barrel domain HFD79_01695 PF01746 tRNA (Guanine-1)-methyltransferase HFD79_01700 PF01245 Ribosomal protein L19 HFD79_01705 PF00561 alpha/beta hydrolase fold HFD79_01710 PF03280 Proteobacterial lipase chaperone protein HFD79_01715 PF09157 Pseudouridine synthase II TruB, C-terminal HFD79_01715 PF16198 tRNA pseudouridylate synthase B C-terminal domain HFD79_01715 PF01509 TruB family pseudouridylate synthase (N terminal domain) HFD79_01720 PF01925 Sulfite exporter TauE/SafE HFD79_01730 PF00892 EamA-like transporter family HFD79_01735 PF00892 EamA-like transporter family HFD79_01740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HFD79_01740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HFD79_01745 PF01565 FAD binding domain HFD79_01745 PF02913 FAD linked oxidases, C-terminal domain HFD79_01755 PF03992 Antibiotic biosynthesis monooxygenase HFD79_01760 PF02525 Flavodoxin-like fold HFD79_01770 PF07690 Major Facilitator Superfamily HFD79_01775 PF12805 FUSC-like inner membrane protein yccS HFD79_01780 PF00080 Copper/zinc superoxide dismutase (SODC) HFD79_01785 PF01594 AI-2E family transporter HFD79_01790 PF13614 AAA domain HFD79_01820 PF00324 Amino acid permease HFD79_01825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HFD79_01825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HFD79_01830 PF00202 Aminotransferase class-III HFD79_01835 PF04958 Arginine N-succinyltransferase beta subunit HFD79_01840 PF00171 Aldehyde dehydrogenase family HFD79_01845 PF04996 Succinylarginine dihydrolase HFD79_01850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HFD79_01865 PF05922 Peptidase inhibitor I9 HFD79_01865 PF00082 Subtilase family HFD79_01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_01880 PF03466 LysR substrate binding domain HFD79_01885 PF00892 EamA-like transporter family HFD79_01895 PF05746 DALR anticodon binding domain HFD79_01895 PF02092 Glycyl-tRNA synthetase beta subunit HFD79_01900 PF02091 Glycyl-tRNA synthetase alpha subunit HFD79_01925 PF00571 CBS domain HFD79_01930 PF04024 PspC domain HFD79_01940 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_01940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_01940 PF12806 Acetyl-CoA dehydrogenase C-terminal like HFD79_01950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HFD79_01950 PF01488 Shikimate / quinate 5-dehydrogenase HFD79_01950 PF08501 Shikimate dehydrogenase substrate binding domain HFD79_01955 PF01218 Coproporphyrinogen III oxidase HFD79_01960 PF00925 GTP cyclohydrolase II HFD79_01965 PF02780 Transketolase, C-terminal domain HFD79_01965 PF02779 Transketolase, pyrimidine binding domain HFD79_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HFD79_01970 PF00459 Inositol monophosphatase family HFD79_01975 PF03880 DbpA RNA binding domain HFD79_01975 PF12343 Cold shock protein DEAD box A HFD79_01975 PF00270 DEAD/DEAH box helicase HFD79_01975 PF00271 Helicase conserved C-terminal domain HFD79_01985 PF00005 ABC transporter HFD79_01990 PF02405 Permease MlaE HFD79_02000 PF05494 MlaC protein HFD79_02010 PF01544 CorA-like Mg2+ transporter protein HFD79_02015 PF03641 Possible lysine decarboxylase HFD79_02020 PF00293 NUDIX domain HFD79_02025 PF00156 Phosphoribosyl transferase domain HFD79_02030 PF00270 DEAD/DEAH box helicase HFD79_02030 PF00271 Helicase conserved C-terminal domain HFD79_02030 PF17191 RecG wedge domain HFD79_02045 PF01553 Acyltransferase HFD79_02055 PF00375 Sodium:dicarboxylate symporter family HFD79_02065 PF01926 50S ribosome-binding GTPase HFD79_02070 PF02082 Transcriptional regulator HFD79_02075 PF00970 Oxidoreductase FAD-binding domain HFD79_02075 PF00042 Globin HFD79_02075 PF00175 Oxidoreductase NAD-binding domain HFD79_02080 PF05872 Bacterial protein of unknown function (DUF853) HFD79_02085 PF01053 Cys/Met metabolism PLP-dependent enzyme HFD79_02090 PF00117 Glutamine amidotransferase class-I HFD79_02095 PF00338 Ribosomal protein S10p/S20e HFD79_02100 PF00297 Ribosomal protein L3 HFD79_02105 PF00573 Ribosomal protein L4/L1 family HFD79_02110 PF00276 Ribosomal protein L23 HFD79_02115 PF00181 Ribosomal Proteins L2, RNA binding domain HFD79_02115 PF03947 Ribosomal Proteins L2, C-terminal domain HFD79_02120 PF00203 Ribosomal protein S19 HFD79_02125 PF00237 Ribosomal protein L22p/L17e HFD79_02130 PF07650 KH domain HFD79_02130 PF00189 Ribosomal protein S3, C-terminal domain HFD79_02135 PF00252 Ribosomal protein L16p/L10e HFD79_02140 PF00831 Ribosomal L29 protein HFD79_02145 PF00366 Ribosomal protein S17 HFD79_02150 PF00238 Ribosomal protein L14p/L23e HFD79_02155 PF00467 KOW motif HFD79_02155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HFD79_02160 PF00673 ribosomal L5P family C-terminus HFD79_02160 PF00281 Ribosomal protein L5 HFD79_02165 PF00253 Ribosomal protein S14p/S29e HFD79_02170 PF00410 Ribosomal protein S8 HFD79_02175 PF00347 Ribosomal protein L6 HFD79_02180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HFD79_02185 PF00333 Ribosomal protein S5, N-terminal domain HFD79_02185 PF03719 Ribosomal protein S5, C-terminal domain HFD79_02190 PF00327 Ribosomal protein L30p/L7e HFD79_02195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HFD79_02200 PF00344 SecY translocase HFD79_02205 PF00444 Ribosomal protein L36 HFD79_02210 PF00416 Ribosomal protein S13/S18 HFD79_02215 PF00411 Ribosomal protein S11 HFD79_02220 PF00163 Ribosomal protein S4/S9 N-terminal domain HFD79_02220 PF01479 S4 domain HFD79_02225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HFD79_02225 PF01000 RNA polymerase Rpb3/RpoA insert domain HFD79_02225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HFD79_02230 PF01196 Ribosomal protein L17 HFD79_02235 PF00743 Flavin-binding monooxygenase-like HFD79_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_02240 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_02245 PF03937 Flavinator of succinate dehydrogenase HFD79_02275 PF09526 Probable metal-binding protein (DUF2387) HFD79_02280 PF01432 Peptidase family M3 HFD79_02285 PF17876 Cold shock domain HFD79_02285 PF08461 Ribonuclease R winged-helix domain HFD79_02285 PF08206 Ribonuclease B OB domain HFD79_02285 PF00773 RNB domain HFD79_02285 PF00575 S1 RNA binding domain HFD79_02330 PF01557 Fumarylacetoacetate (FAA) hydrolase family HFD79_02335 PF12833 Helix-turn-helix domain HFD79_02340 PF00892 EamA-like transporter family HFD79_02345 PF03631 Virulence factor BrkB HFD79_02350 PF03358 NADPH-dependent FMN reductase HFD79_02375 PF02130 Uncharacterized protein family UPF0054 HFD79_02380 PF02562 PhoH-like protein HFD79_02385 PF01938 TRAM domain HFD79_02385 PF00919 Uncharacterized protein family UPF0004 HFD79_02385 PF04055 Radical SAM superfamily HFD79_02390 PF01551 Peptidase family M23 HFD79_02390 PF10145 Phage-related minor tail protein HFD79_02390 PF01464 Transglycosylase SLT domain HFD79_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain HFD79_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HFD79_02420 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HFD79_02425 PF01066 CDP-alcohol phosphatidyltransferase HFD79_02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_02470 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_02475 PF00440 Bacterial regulatory proteins, tetR family HFD79_02475 PF17932 Tetracyclin repressor-like, C-terminal domain HFD79_02490 PF01039 Carboxyl transferase domain HFD79_02495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_02495 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_02495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_02505 PF02785 Biotin carboxylase C-terminal domain HFD79_02505 PF00289 Biotin carboxylase, N-terminal domain HFD79_02505 PF00364 Biotin-requiring enzyme HFD79_02515 PF04386 Stringent starvation protein B HFD79_02520 PF13417 Glutathione S-transferase, N-terminal domain HFD79_02520 PF00043 Glutathione S-transferase, C-terminal domain HFD79_02525 PF00380 Ribosomal protein S9/S16 HFD79_02530 PF00572 Ribosomal protein L13 HFD79_02535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HFD79_02540 PF00398 Ribosomal RNA adenine dimethylase HFD79_02545 PF00149 Calcineurin-like phosphoesterase HFD79_02565 PF13167 GTP-binding GTPase N-terminal HFD79_02565 PF01926 50S ribosome-binding GTPase HFD79_02565 PF16360 GTP-binding GTPase Middle Region HFD79_02575 PF13091 PLD-like domain HFD79_02580 PF10518 TAT (twin-arginine translocation) pathway signal sequence HFD79_02580 PF00149 Calcineurin-like phosphoesterase HFD79_02585 PF00691 OmpA family HFD79_02585 PF01389 OmpA-like transmembrane domain HFD79_02590 PF17152 Periplasmic sensor domain HFD79_02590 PF00990 Diguanylate cyclase, GGDEF domain HFD79_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_02625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HFD79_02635 PF00753 Metallo-beta-lactamase superfamily HFD79_02635 PF04273 Putative phosphatase (DUF442) HFD79_02640 PF00561 alpha/beta hydrolase fold HFD79_02645 PF00085 Thioredoxin HFD79_02650 PF03061 Thioesterase superfamily HFD79_02660 PF04461 Protein of unknown function (DUF520) HFD79_02670 PF01266 FAD dependent oxidoreductase HFD79_02670 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HFD79_02680 PF03795 YCII-related domain HFD79_02685 PF04279 Intracellular septation protein A HFD79_02690 PF02811 PHP domain HFD79_02695 PF01062 Bestrophin, RFP-TM, chloride channel HFD79_02700 PF04002 RadC-like JAB domain HFD79_02705 PF02441 Flavoprotein HFD79_02705 PF04127 DNA / pantothenate metabolism flavoprotein HFD79_02710 PF02355 Protein export membrane protein HFD79_02710 PF07549 SecD/SecF GG Motif HFD79_02715 PF13721 SecD export protein N-terminal TM region HFD79_02715 PF02355 Protein export membrane protein HFD79_02715 PF07549 SecD/SecF GG Motif HFD79_02720 PF02699 Preprotein translocase subunit HFD79_02725 PF01702 Queuine tRNA-ribosyltransferase HFD79_02740 PF02547 Queuosine biosynthesis protein HFD79_02765 PF07689 KaiB domain HFD79_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_02765 PF00512 His Kinase A (phospho-acceptor) domain HFD79_02770 PF03710 Glutamate-ammonia ligase adenylyltransferase HFD79_02770 PF08335 GlnD PII-uridylyltransferase HFD79_02775 PF01063 Amino-transferase class IV HFD79_02790 PF01522 Polysaccharide deacetylase HFD79_02795 PF00535 Glycosyl transferase family 2 HFD79_02800 PF13439 Glycosyltransferase Family 4 HFD79_02800 PF00534 Glycosyl transferases group 1 HFD79_02830 PF17101 Stealth protein CR1, conserved region 1 HFD79_02830 PF11380 Stealth protein CR2, conserved region 2 HFD79_02830 PF17102 Stealth protein CR3, conserved region 3 HFD79_02835 PF00152 tRNA synthetases class II (D, K and N) HFD79_02835 PF02938 GAD domain HFD79_02835 PF01336 OB-fold nucleic acid binding domain HFD79_02845 PF07715 TonB-dependent Receptor Plug Domain HFD79_02845 PF00593 TonB dependent receptor HFD79_02865 PF06146 Phosphate-starvation-inducible E HFD79_02870 PF00043 Glutathione S-transferase, C-terminal domain HFD79_02870 PF02798 Glutathione S-transferase, N-terminal domain HFD79_02875 PF03466 LysR substrate binding domain HFD79_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_02880 PF12806 Acetyl-CoA dehydrogenase C-terminal like HFD79_02880 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_02880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_02885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_02885 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_02885 PF12806 Acetyl-CoA dehydrogenase C-terminal like HFD79_02885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_02895 PF00672 HAMP domain HFD79_02895 PF00512 His Kinase A (phospho-acceptor) domain HFD79_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_02900 PF00072 Response regulator receiver domain HFD79_02900 PF00486 Transcriptional regulatory protein, C terminal HFD79_02905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HFD79_02925 PF01923 Cobalamin adenosyltransferase HFD79_02930 PF07715 TonB-dependent Receptor Plug Domain HFD79_02930 PF00593 TonB dependent receptor HFD79_02935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HFD79_02940 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_02965 PF00290 Tryptophan synthase alpha chain HFD79_02970 PF01039 Carboxyl transferase domain HFD79_02975 PF02875 Mur ligase family, glutamate ligase domain HFD79_02975 PF08245 Mur ligase middle domain HFD79_02990 PF00753 Metallo-beta-lactamase superfamily HFD79_02995 PF00578 AhpC/TSA family HFD79_02995 PF10417 C-terminal domain of 1-Cys peroxiredoxin HFD79_03000 PF02810 SEC-C motif HFD79_03000 PF07517 SecA DEAD-like domain HFD79_03000 PF01043 SecA preprotein cross-linking domain HFD79_03000 PF07516 SecA Wing and Scaffold domain HFD79_03010 PF07690 Major Facilitator Superfamily HFD79_03010 PF00083 Sugar (and other) transporter HFD79_03015 PF03006 Haemolysin-III related HFD79_03045 PF00378 Enoyl-CoA hydratase/isomerase HFD79_03045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HFD79_03045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HFD79_03050 PF02803 Thiolase, C-terminal domain HFD79_03050 PF00108 Thiolase, N-terminal domain HFD79_03055 PF02311 AraC-like ligand binding domain HFD79_03055 PF12833 Helix-turn-helix domain HFD79_03060 PF02515 CoA-transferase family III HFD79_03065 PF04966 Carbohydrate-selective porin, OprB family HFD79_03070 PF01011 PQQ enzyme repeat HFD79_03075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HFD79_03075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HFD79_03085 PF00893 Small Multidrug Resistance protein HFD79_03095 PF02803 Thiolase, C-terminal domain HFD79_03095 PF00108 Thiolase, N-terminal domain HFD79_03105 PF13505 Outer membrane protein beta-barrel domain HFD79_03105 PF00691 OmpA family HFD79_03115 PF01139 tRNA-splicing ligase RtcB HFD79_03120 PF00324 Amino acid permease HFD79_03125 PF05175 Methyltransferase small domain HFD79_03125 PF08468 Methyltransferase small domain N-terminal HFD79_03130 PF00860 Permease family HFD79_03140 PF01741 Large-conductance mechanosensitive channel, MscL HFD79_03155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HFD79_03155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HFD79_03155 PF06827 Zinc finger found in FPG and IleRS HFD79_03160 PF02245 Methylpurine-DNA glycosylase (MPG) HFD79_03165 PF07715 TonB-dependent Receptor Plug Domain HFD79_03165 PF00593 TonB dependent receptor HFD79_03180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_03185 PF03547 Membrane transport protein HFD79_03195 PF13098 Thioredoxin-like domain HFD79_03195 PF10411 Disulfide bond isomerase protein N-terminus HFD79_03200 PF01571 Aminomethyltransferase folate-binding domain HFD79_03210 PF04343 Protein of unknown function, DUF488 HFD79_03215 PF03831 PhnA domain HFD79_03215 PF08274 PhnA Zinc-Ribbon HFD79_03220 PF07411 Domain of unknown function (DUF1508) HFD79_03225 PF04073 Aminoacyl-tRNA editing domain HFD79_03225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HFD79_03225 PF03129 Anticodon binding domain HFD79_03230 PF00873 AcrB/AcrD/AcrF family HFD79_03245 PF00072 Response regulator receiver domain HFD79_03250 PF00072 Response regulator receiver domain HFD79_03255 PF01584 CheW-like domain HFD79_03260 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HFD79_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HFD79_03265 PF01627 Hpt domain HFD79_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_03265 PF01584 CheW-like domain HFD79_03265 PF00072 Response regulator receiver domain HFD79_03275 PF07687 Peptidase dimerisation domain HFD79_03275 PF01546 Peptidase family M20/M25/M40 HFD79_03280 PF08085 Entericidin EcnA/B family HFD79_03290 PF04304 Protein of unknown function (DUF454) HFD79_03295 PF17969 L,D-transpeptidase C-terminal domain HFD79_03295 PF03734 L,D-transpeptidase catalytic domain HFD79_03335 PF00175 Oxidoreductase NAD-binding domain HFD79_03335 PF00258 Flavodoxin HFD79_03335 PF00667 FAD binding domain HFD79_03345 PF12805 FUSC-like inner membrane protein yccS HFD79_03350 PF07690 Major Facilitator Superfamily HFD79_03355 PF00881 Nitroreductase family HFD79_03370 PF01235 Sodium:alanine symporter family HFD79_03375 PF01734 Patatin-like phospholipase HFD79_03380 PF13291 ACT domain HFD79_03380 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_03385 PF05992 SbmA/BacA-like family HFD79_03415 PF02637 GatB domain HFD79_03415 PF02934 GatB/GatE catalytic domain HFD79_03420 PF01425 Amidase HFD79_03425 PF02686 Glu-tRNAGln amidotransferase C subunit HFD79_03435 PF04085 rod shape-determining protein MreC HFD79_03440 PF04093 rod shape-determining protein MreD HFD79_03445 PF02545 Maf-like protein HFD79_03450 PF10150 Ribonuclease E/G family HFD79_03450 PF00575 S1 RNA binding domain HFD79_03460 PF06974 Protein of unknown function (DUF1298) HFD79_03460 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HFD79_03465 PF01507 Phosphoadenosine phosphosulfate reductase family HFD79_03480 PF02525 Flavodoxin-like fold HFD79_03500 PF02673 Bacitracin resistance protein BacA HFD79_03505 PF06719 AraC-type transcriptional regulator N-terminus HFD79_03505 PF12833 Helix-turn-helix domain HFD79_03510 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_03510 PF09277 Erythronolide synthase, docking HFD79_03510 PF08990 Erythronolide synthase docking HFD79_03510 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_03510 PF08659 KR domain HFD79_03510 PF00698 Acyl transferase domain HFD79_03510 PF00550 Phosphopantetheine attachment site HFD79_03510 PF14765 Polyketide synthase dehydratase HFD79_03510 PF16197 Ketoacyl-synthetase C-terminal extension HFD79_03510 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_03515 PF01965 DJ-1/PfpI family HFD79_03525 PF00324 Amino acid permease HFD79_03530 PF04303 PrpF protein HFD79_03535 PF00348 Polyprenyl synthetase HFD79_03540 PF04237 YjbR HFD79_03545 PF01145 SPFH domain / Band 7 family HFD79_03555 PF01734 Patatin-like phospholipase HFD79_03575 PF08019 Phosphoethanolamine transferase EptA/EptB HFD79_03575 PF00884 Sulfatase HFD79_03580 PF00486 Transcriptional regulatory protein, C terminal HFD79_03580 PF00072 Response regulator receiver domain HFD79_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_03585 PF00512 His Kinase A (phospho-acceptor) domain HFD79_03585 PF08521 Two-component sensor kinase N-terminal HFD79_03595 PF00909 Ammonium Transporter Family HFD79_03600 PF03466 LysR substrate binding domain HFD79_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_03620 PF10458 Valyl tRNA synthetase tRNA binding arm HFD79_03620 PF08264 Anticodon-binding domain of tRNA HFD79_03620 PF00133 tRNA synthetases class I (I, L, M and V) HFD79_03640 PF01906 Putative heavy-metal-binding HFD79_03645 PF01906 Putative heavy-metal-binding HFD79_03650 PF02321 Outer membrane efflux protein HFD79_03655 PF00873 AcrB/AcrD/AcrF family HFD79_03660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_03660 PF00529 HlyD membrane-fusion protein of T1SS HFD79_03665 PF01569 PAP2 superfamily HFD79_03675 PF00348 Polyprenyl synthetase HFD79_03685 PF00829 Ribosomal prokaryotic L21 protein HFD79_03690 PF01016 Ribosomal L27 protein HFD79_03695 PF03548 Outer membrane lipoprotein carrier protein LolA HFD79_03705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HFD79_03705 PF02403 Seryl-tRNA synthetase N-terminal domain HFD79_03710 PF10414 Sirohaem synthase dimerisation region HFD79_03710 PF14824 Sirohaem biosynthesis protein central HFD79_03710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HFD79_03715 PF00588 SpoU rRNA Methylase family HFD79_03720 PF01638 HxlR-like helix-turn-helix HFD79_03725 PF03358 NADPH-dependent FMN reductase HFD79_03730 PF13520 Amino acid permease HFD79_03735 PF00465 Iron-containing alcohol dehydrogenase HFD79_03745 PF03099 Biotin/lipoate A/B protein ligase family HFD79_03750 PF04359 Protein of unknown function (DUF493) HFD79_03755 PF00140 Sigma-70 factor, region 1.2 HFD79_03755 PF04542 Sigma-70 region 2 HFD79_03755 PF04539 Sigma-70 region 3 HFD79_03755 PF04545 Sigma-70, region 4 HFD79_03755 PF04546 Sigma-70, non-essential region HFD79_03755 PF03979 Sigma-70 factor, region 1.1 HFD79_03785 PF00285 Citrate synthase, C-terminal domain HFD79_03790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HFD79_03795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HFD79_03800 PF02910 Fumarate reductase flavoprotein C-term HFD79_03800 PF00890 FAD binding domain HFD79_03805 PF13085 2Fe-2S iron-sulfur cluster binding domain HFD79_03820 PF00676 Dehydrogenase E1 component HFD79_03820 PF16078 2-oxoglutarate dehydrogenase N-terminus HFD79_03820 PF02779 Transketolase, pyrimidine binding domain HFD79_03820 PF16870 2-oxoglutarate dehydrogenase C-terminal HFD79_03825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HFD79_03825 PF00364 Biotin-requiring enzyme HFD79_03825 PF02817 e3 binding domain HFD79_03830 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_03830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HFD79_03835 PF00549 CoA-ligase HFD79_03835 PF08442 ATP-grasp domain HFD79_03840 PF02629 CoA binding domain HFD79_03840 PF00549 CoA-ligase HFD79_03845 PF00579 tRNA synthetases class I (W and Y) HFD79_03850 PF05661 Protein of unknown function (DUF808) HFD79_03855 PF04228 Putative neutral zinc metallopeptidase HFD79_03860 PF00999 Sodium/hydrogen exchanger family HFD79_03895 PF09587 Bacterial capsule synthesis protein PGA_cap HFD79_03905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HFD79_03910 PF00582 Universal stress protein family HFD79_03915 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_03920 PF03449 Transcription elongation factor, N-terminal HFD79_03920 PF01272 Transcription elongation factor, GreA/GreB, C-term HFD79_03925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HFD79_03925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_03925 PF02142 MGS-like domain HFD79_03930 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HFD79_03930 PF00117 Glutamine amidotransferase class-I HFD79_03945 PF01985 CRS1 / YhbY (CRM) domain HFD79_03950 PF01728 FtsJ-like methyltransferase HFD79_03955 PF06480 FtsH Extracellular HFD79_03955 PF17862 AAA+ lid domain HFD79_03955 PF01434 Peptidase family M41 HFD79_03955 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_03960 PF00809 Pterin binding enzyme HFD79_03980 PF16655 PhoD-like phosphatase, N-terminal domain HFD79_03980 PF09423 PhoD-like phosphatase HFD79_03995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HFD79_03995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HFD79_04010 PF00083 Sugar (and other) transporter HFD79_04015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HFD79_04015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HFD79_04020 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HFD79_04020 PF01266 FAD dependent oxidoreductase HFD79_04025 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HFD79_04025 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HFD79_04030 PF00781 Diacylglycerol kinase catalytic domain HFD79_04035 PF00149 Calcineurin-like phosphoesterase HFD79_04045 PF00166 Chaperonin 10 Kd subunit HFD79_04050 PF00118 TCP-1/cpn60 chaperonin family HFD79_04055 PF01219 Prokaryotic diacylglycerol kinase HFD79_04060 PF00753 Metallo-beta-lactamase superfamily HFD79_04065 PF03009 Glycerophosphoryl diester phosphodiesterase family HFD79_04070 PF00873 AcrB/AcrD/AcrF family HFD79_04080 PF01435 Peptidase family M48 HFD79_04085 PF01464 Transglycosylase SLT domain HFD79_04090 PF01171 PP-loop family HFD79_04100 PF01464 Transglycosylase SLT domain HFD79_04100 PF00497 Bacterial extracellular solute-binding proteins, family 3 HFD79_04105 PF01272 Transcription elongation factor, GreA/GreB, C-term HFD79_04105 PF03449 Transcription elongation factor, N-terminal HFD79_04120 PF00501 AMP-binding enzyme HFD79_04120 PF00668 Condensation domain HFD79_04120 PF00550 Phosphopantetheine attachment site HFD79_04120 PF00975 Thioesterase domain HFD79_04120 PF13193 AMP-binding enzyme C-terminal domain HFD79_04145 PF00881 Nitroreductase family HFD79_04160 PF02595 Glycerate kinase family HFD79_04165 PF00384 Molybdopterin oxidoreductase HFD79_04170 PF02634 FdhD/NarQ family HFD79_04175 PF06803 Protein of unknown function (DUF1232) HFD79_04180 PF11890 Domain of unknown function (DUF3410) HFD79_04180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HFD79_04180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HFD79_04185 PF00152 tRNA synthetases class II (D, K and N) HFD79_04195 PF18073 Rubredoxin metal binding domain HFD79_04200 PF00324 Amino acid permease HFD79_04210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HFD79_04210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HFD79_04215 PF01678 Diaminopimelate epimerase HFD79_04220 PF01810 LysE type translocator HFD79_04225 PF00589 Phage integrase family HFD79_04225 PF02899 Phage integrase, N-terminal SAM-like domain HFD79_04230 PF01012 Electron transfer flavoprotein domain HFD79_04235 PF01012 Electron transfer flavoprotein domain HFD79_04235 PF00766 Electron transfer flavoprotein FAD-binding domain HFD79_04240 PF00521 DNA gyrase/topoisomerase IV, subunit A HFD79_04240 PF03989 DNA gyrase C-terminal domain, beta-propeller HFD79_04255 PF00535 Glycosyl transferase family 2 HFD79_04275 PF13533 Biotin-lipoyl like HFD79_04285 PF00266 Aminotransferase class-V HFD79_04300 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HFD79_04310 PF12704 MacB-like periplasmic core domain HFD79_04310 PF02687 FtsX-like permease family HFD79_04315 PF00005 ABC transporter HFD79_04320 PF00753 Metallo-beta-lactamase superfamily HFD79_04320 PF13567 Domain of unknown function (DUF4131) HFD79_04320 PF03772 Competence protein HFD79_04330 PF01343 Peptidase family S49 HFD79_04330 PF06965 Na+/H+ antiporter 1 HFD79_04335 PF12697 Alpha/beta hydrolase family HFD79_04340 PF00551 Formyl transferase HFD79_04345 PF00586 AIR synthase related protein, N-terminal domain HFD79_04345 PF02769 AIR synthase related protein, C-terminal domain HFD79_04350 PF01594 AI-2E family transporter HFD79_04355 PF00308 Bacterial dnaA protein HFD79_04355 PF08299 Bacterial dnaA protein helix-turn-helix HFD79_04355 PF11638 DnaA N-terminal domain HFD79_04385 PF08032 RNA 2'-O ribose methyltransferase substrate binding HFD79_04385 PF00588 SpoU rRNA Methylase family HFD79_04390 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HFD79_04400 PF00691 OmpA family HFD79_04405 PF07676 WD40-like Beta Propeller Repeat HFD79_04405 PF04052 TolB amino-terminal domain HFD79_04415 PF02472 Biopolymer transport protein ExbD/TolR HFD79_04420 PF01618 MotA/TolQ/ExbB proton channel family HFD79_04425 PF03061 Thioesterase superfamily HFD79_04430 PF01546 Peptidase family M20/M25/M40 HFD79_04430 PF07687 Peptidase dimerisation domain HFD79_04435 PF05491 RuvB C-terminal winged helix domain HFD79_04435 PF17864 RuvB AAA lid domain HFD79_04435 PF05496 Holliday junction DNA helicase RuvB P-loop domain HFD79_04440 PF01330 RuvA N terminal domain HFD79_04440 PF07499 RuvA, C-terminal domain HFD79_04445 PF01966 HD domain HFD79_04450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HFD79_04450 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HFD79_04450 PF02769 AIR synthase related protein, C-terminal domain HFD79_04455 PF07690 Major Facilitator Superfamily HFD79_04460 PF01784 NIF3 (NGG1p interacting factor 3) HFD79_04465 PF00378 Enoyl-CoA hydratase/isomerase HFD79_04470 PF01467 Cytidylyltransferase-like HFD79_04470 PF00293 NUDIX domain HFD79_04480 PF00578 AhpC/TSA family HFD79_04495 PF06508 Queuosine biosynthesis protein QueC HFD79_04505 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_04505 PF14602 Hexapeptide repeat of succinyl-transferase HFD79_04505 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HFD79_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_04515 PF03466 LysR substrate binding domain HFD79_04520 PF12857 TOBE-like domain HFD79_04520 PF00005 ABC transporter HFD79_04525 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_04530 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_04545 PF01063 Amino-transferase class IV HFD79_04550 PF02618 YceG-like family HFD79_04555 PF02223 Thymidylate kinase HFD79_04565 PF02910 Fumarate reductase flavoprotein C-term HFD79_04565 PF00890 FAD binding domain HFD79_04570 PF13180 PDZ domain HFD79_04580 PF00009 Elongation factor Tu GTP binding domain HFD79_04580 PF00679 Elongation factor G C-terminus HFD79_04580 PF06421 GTP-binding protein LepA C-terminus HFD79_04580 PF03144 Elongation factor Tu domain 2 HFD79_04585 PF10502 Signal peptidase, peptidase S26 HFD79_04595 PF14622 Ribonuclease-III-like HFD79_04595 PF00035 Double-stranded RNA binding motif HFD79_04600 PF01926 50S ribosome-binding GTPase HFD79_04600 PF07650 KH domain HFD79_04610 PF02565 Recombination protein O C terminal HFD79_04610 PF11967 Recombination protein O N terminal HFD79_04615 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HFD79_04620 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HFD79_04625 PF00106 short chain dehydrogenase HFD79_04655 PF00155 Aminotransferase class I and II HFD79_04665 PF00990 Diguanylate cyclase, GGDEF domain HFD79_04665 PF17151 Periplasmic sensor domain HFD79_04675 PF02151 UvrB/uvrC motif HFD79_04675 PF04851 Type III restriction enzyme, res subunit HFD79_04675 PF00271 Helicase conserved C-terminal domain HFD79_04675 PF12344 Ultra-violet resistance protein B HFD79_04675 PF17757 UvrB interaction domain HFD79_04685 PF00892 EamA-like transporter family HFD79_04690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HFD79_04690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HFD79_04705 PF01018 GTP1/OBG HFD79_04705 PF01926 50S ribosome-binding GTPase HFD79_04710 PF01472 PUA domain HFD79_04710 PF00696 Amino acid kinase family HFD79_04720 PF07759 Protein of unknown function (DUF1615) HFD79_04725 PF01207 Dihydrouridine synthase (Dus) HFD79_04730 PF03060 Nitronate monooxygenase HFD79_04745 PF02350 UDP-N-acetylglucosamine 2-epimerase HFD79_04775 PF03441 FAD binding domain of DNA photolyase HFD79_04775 PF00875 DNA photolyase HFD79_04780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_04790 PF07943 Penicillin-binding protein 5, C-terminal domain HFD79_04790 PF00768 D-alanyl-D-alanine carboxypeptidase HFD79_04800 PF03971 Monomeric isocitrate dehydrogenase HFD79_04805 PF00849 RNA pseudouridylate synthase HFD79_04810 PF00180 Isocitrate/isopropylmalate dehydrogenase HFD79_04830 PF06779 Uncharacterised MFS-type transporter YbfB HFD79_04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_04835 PF03466 LysR substrate binding domain HFD79_04845 PF02567 Phenazine biosynthesis-like protein HFD79_04850 PF05193 Peptidase M16 inactive domain HFD79_04850 PF00675 Insulinase (Peptidase family M16) HFD79_04885 PF02581 Thiamine monophosphate synthase HFD79_04890 PF00202 Aminotransferase class-III HFD79_04900 PF00849 RNA pseudouridylate synthase HFD79_04905 PF18337 RapA N-terminal Tudor like domain HFD79_04905 PF00271 Helicase conserved C-terminal domain HFD79_04905 PF18339 RapA N-terminal Tudor like domain 1 HFD79_04905 PF00176 SNF2 family N-terminal domain HFD79_04905 PF12137 RNA polymerase recycling family C-terminal HFD79_04915 PF00440 Bacterial regulatory proteins, tetR family HFD79_04920 PF00970 Oxidoreductase FAD-binding domain HFD79_04920 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_04920 PF00175 Oxidoreductase NAD-binding domain HFD79_04925 PF00487 Fatty acid desaturase HFD79_04935 PF17754 MftR C-terminal domain HFD79_04935 PF00440 Bacterial regulatory proteins, tetR family HFD79_04945 PF00202 Aminotransferase class-III HFD79_04950 PF00282 Pyridoxal-dependent decarboxylase conserved domain HFD79_04955 PF00171 Aldehyde dehydrogenase family HFD79_04960 PF01037 Lrp/AsnC ligand binding domain HFD79_04965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HFD79_04965 PF00205 Thiamine pyrophosphate enzyme, central domain HFD79_04965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HFD79_04970 PF00324 Amino acid permease HFD79_04975 PF12849 PBP superfamily domain HFD79_04980 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_04985 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_04990 PF00005 ABC transporter HFD79_04995 PF01343 Peptidase family S49 HFD79_04995 PF08496 Peptidase family S49 N-terminal HFD79_05010 PF08328 Adenylosuccinate lyase C-terminal HFD79_05010 PF00206 Lyase HFD79_05015 PF04356 Protein of unknown function (DUF489) HFD79_05025 PF13344 Haloacid dehalogenase-like hydrolase HFD79_05025 PF00293 NUDIX domain HFD79_05030 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_05035 PF07943 Penicillin-binding protein 5, C-terminal domain HFD79_05035 PF00768 D-alanyl-D-alanine carboxypeptidase HFD79_05050 PF01975 Survival protein SurE HFD79_05055 PF01551 Peptidase family M23 HFD79_05055 PF01476 LysM domain HFD79_05060 PF03466 LysR substrate binding domain HFD79_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_05065 PF13654 AAA domain HFD79_05065 PF05362 Lon protease (S16) C-terminal proteolytic domain HFD79_05070 PF07690 Major Facilitator Superfamily HFD79_05075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HFD79_05080 PF13593 SBF-like CPA transporter family (DUF4137) HFD79_05085 PF01197 Ribosomal protein L31 HFD79_05100 PF04055 Radical SAM superfamily HFD79_05105 PF01132 Elongation factor P (EF-P) OB domain HFD79_05105 PF08207 Elongation factor P (EF-P) KOW-like domain HFD79_05105 PF09285 Elongation factor P, C-terminal HFD79_05110 PF13722 5TM C-terminal transporter carbon starvation CstA HFD79_05110 PF02554 Carbon starvation protein CstA HFD79_05115 PF04328 Selenoprotein, putative HFD79_05150 PF13556 PucR C-terminal helix-turn-helix domain HFD79_05150 PF17853 GGDEF-like domain HFD79_05150 PF06018 CodY GAF-like domain HFD79_05165 PF00171 Aldehyde dehydrogenase family HFD79_05170 PF00324 Amino acid permease HFD79_05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_05175 PF03466 LysR substrate binding domain HFD79_05180 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_05185 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_05190 PF00355 Rieske [2Fe-2S] domain HFD79_05190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HFD79_05195 PF00171 Aldehyde dehydrogenase family HFD79_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_05200 PF18113 Rubredoxin binding C-terminal domain HFD79_05205 PF01266 FAD dependent oxidoreductase HFD79_05205 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HFD79_05225 PF00892 EamA-like transporter family HFD79_05235 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HFD79_05240 PF00083 Sugar (and other) transporter HFD79_05245 PF13378 Enolase C-terminal domain-like HFD79_05245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HFD79_05250 PF14765 Polyketide synthase dehydratase HFD79_05250 PF00550 Phosphopantetheine attachment site HFD79_05250 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_05250 PF08659 KR domain HFD79_05250 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_05250 PF16197 Ketoacyl-synthetase C-terminal extension HFD79_05250 PF09277 Erythronolide synthase, docking HFD79_05250 PF00698 Acyl transferase domain HFD79_05250 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_05250 PF08990 Erythronolide synthase docking HFD79_05255 PF00440 Bacterial regulatory proteins, tetR family HFD79_05280 PF02678 Pirin HFD79_05280 PF17954 Quercetinase C-terminal cupin domain HFD79_05290 PF13309 HTH domain HFD79_05290 PF08348 YheO-like PAS domain HFD79_05300 PF00668 Condensation domain HFD79_05300 PF00550 Phosphopantetheine attachment site HFD79_05300 PF13193 AMP-binding enzyme C-terminal domain HFD79_05300 PF00501 AMP-binding enzyme HFD79_05305 PF00975 Thioesterase domain HFD79_05305 PF00550 Phosphopantetheine attachment site HFD79_05305 PF00501 AMP-binding enzyme HFD79_05305 PF13193 AMP-binding enzyme C-terminal domain HFD79_05305 PF00668 Condensation domain HFD79_05310 PF01032 FecCD transport family HFD79_05315 PF01032 FecCD transport family HFD79_05320 PF00005 ABC transporter HFD79_05325 PF01497 Periplasmic binding protein HFD79_05330 PF00593 TonB dependent receptor HFD79_05330 PF07715 TonB-dependent Receptor Plug Domain HFD79_05335 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HFD79_05340 PF00501 AMP-binding enzyme HFD79_05340 PF00550 Phosphopantetheine attachment site HFD79_05340 PF00668 Condensation domain HFD79_05345 PF13193 AMP-binding enzyme C-terminal domain HFD79_05345 PF00501 AMP-binding enzyme HFD79_05350 PF00857 Isochorismatase family HFD79_05350 PF00550 Phosphopantetheine attachment site HFD79_05355 PF00282 Pyridoxal-dependent decarboxylase conserved domain HFD79_05365 PF00664 ABC transporter transmembrane region HFD79_05365 PF00005 ABC transporter HFD79_05370 PF00664 ABC transporter transmembrane region HFD79_05370 PF00005 ABC transporter HFD79_05375 PF00975 Thioesterase domain HFD79_05385 PF00425 chorismate binding enzyme HFD79_05395 PF01208 Uroporphyrinogen decarboxylase (URO-D) HFD79_05400 PF05675 Protein of unknown function (DUF817) HFD79_05415 PF00144 Beta-lactamase HFD79_05430 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_05430 PF01799 [2Fe-2S] binding domain HFD79_05435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HFD79_05435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HFD79_05450 PF00218 Indole-3-glycerol phosphate synthase HFD79_05455 PF00591 Glycosyl transferase family, a/b domain HFD79_05455 PF02885 Glycosyl transferase family, helical bundle domain HFD79_05460 PF00593 TonB dependent receptor HFD79_05460 PF07715 TonB-dependent Receptor Plug Domain HFD79_05465 PF11838 ERAP1-like C-terminal domain HFD79_05465 PF01433 Peptidase family M1 domain HFD79_05470 PF00117 Glutamine amidotransferase class-I HFD79_05520 PF01726 LexA DNA binding domain HFD79_05520 PF00717 Peptidase S24-like HFD79_05525 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HFD79_05810 PF00589 Phage integrase family HFD79_05810 PF13356 Arm DNA-binding domain HFD79_05820 PF00854 POT family HFD79_05825 PF00120 Glutamine synthetase, catalytic domain HFD79_05825 PF03951 Glutamine synthetase, beta-Grasp domain HFD79_05830 PF04345 Chorismate lyase HFD79_05835 PF01040 UbiA prenyltransferase family HFD79_05870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HFD79_05870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HFD79_05875 PF01784 NIF3 (NGG1p interacting factor 3) HFD79_05880 PF13180 PDZ domain HFD79_05885 PF12627 Probable RNA and SrmB- binding site of polymerase A HFD79_05885 PF01743 Poly A polymerase head domain HFD79_05890 PF03949 Malic enzyme, NAD binding domain HFD79_05890 PF00390 Malic enzyme, N-terminal domain HFD79_05890 PF01515 Phosphate acetyl/butaryl transferase HFD79_05895 PF03707 Bacterial signalling protein N terminal repeat HFD79_05895 PF00990 Diguanylate cyclase, GGDEF domain HFD79_05895 PF00563 EAL domain HFD79_05900 PF04452 RNA methyltransferase HFD79_05905 PF02219 Methylenetetrahydrofolate reductase HFD79_05910 PF05221 S-adenosyl-L-homocysteine hydrolase HFD79_05910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HFD79_05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_05925 PF09317 Domain of unknown function (DUF1974) HFD79_05925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_05930 PF04055 Radical SAM superfamily HFD79_05935 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_05935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HFD79_05945 PF07690 Major Facilitator Superfamily HFD79_05955 PF00557 Metallopeptidase family M24 HFD79_05960 PF00318 Ribosomal protein S2 HFD79_05965 PF00889 Elongation factor TS HFD79_05975 PF12833 Helix-turn-helix domain HFD79_05995 PF03330 Lytic transglycolase HFD79_05995 PF05036 Sporulation related domain HFD79_06000 PF13406 Transglycosylase SLT domain HFD79_06005 PF01098 Cell cycle protein HFD79_06015 PF14489 QueF-like protein HFD79_06015 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HFD79_06020 PF01061 ABC-2 type transporter HFD79_06025 PF00005 ABC transporter HFD79_06055 PF00464 Serine hydroxymethyltransferase HFD79_06060 PF02321 Outer membrane efflux protein HFD79_06065 PF00873 AcrB/AcrD/AcrF family HFD79_06070 PF13533 Biotin-lipoyl like HFD79_06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_06075 PF03466 LysR substrate binding domain HFD79_06080 PF00497 Bacterial extracellular solute-binding proteins, family 3 HFD79_06085 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_06090 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_06095 PF00005 ABC transporter HFD79_06100 PF00893 Small Multidrug Resistance protein HFD79_06105 PF00037 4Fe-4S binding domain HFD79_06115 PF00155 Aminotransferase class I and II HFD79_06115 PF00392 Bacterial regulatory proteins, gntR family HFD79_06120 PF02567 Phenazine biosynthesis-like protein HFD79_06125 PF00970 Oxidoreductase FAD-binding domain HFD79_06125 PF00175 Oxidoreductase NAD-binding domain HFD79_06130 PF18389 TrmO C-terminal domain HFD79_06130 PF01980 tRNA-methyltransferase O HFD79_06140 PF00437 Type II/IV secretion system protein HFD79_06150 PF00072 Response regulator receiver domain HFD79_06150 PF00486 Transcriptional regulatory protein, C terminal HFD79_06155 PF00512 His Kinase A (phospho-acceptor) domain HFD79_06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_06155 PF08521 Two-component sensor kinase N-terminal HFD79_06165 PF00293 NUDIX domain HFD79_06175 PF14814 Bifunctional transglycosylase second domain HFD79_06175 PF00905 Penicillin binding protein transpeptidase domain HFD79_06175 PF00912 Transglycosylase HFD79_06180 PF01513 ATP-NAD kinase HFD79_06185 PF07023 Protein of unknown function (DUF1315) HFD79_06190 PF00591 Glycosyl transferase family, a/b domain HFD79_06190 PF02885 Glycosyl transferase family, helical bundle domain HFD79_06195 PF00375 Sodium:dicarboxylate symporter family HFD79_06200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_06200 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_06200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_06205 PF00756 Putative esterase HFD79_06210 PF00800 Prephenate dehydratase HFD79_06210 PF01817 Chorismate mutase type II HFD79_06210 PF01842 ACT domain HFD79_06215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HFD79_06225 PF01546 Peptidase family M20/M25/M40 HFD79_06225 PF07687 Peptidase dimerisation domain HFD79_06230 PF12706 Beta-lactamase superfamily domain HFD79_06240 PF03883 Peroxide stress protein YaaA HFD79_06250 PF05690 Thiazole biosynthesis protein ThiG HFD79_06260 PF04241 Protein of unknown function (DUF423) HFD79_06265 PF00140 Sigma-70 factor, region 1.2 HFD79_06265 PF04542 Sigma-70 region 2 HFD79_06265 PF04545 Sigma-70, region 4 HFD79_06275 PF00313 'Cold-shock' DNA-binding domain HFD79_06280 PF00270 DEAD/DEAH box helicase HFD79_06280 PF00271 Helicase conserved C-terminal domain HFD79_06290 PF00881 Nitroreductase family HFD79_06295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HFD79_06295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HFD79_06305 PF00589 Phage integrase family HFD79_06400 PF01555 DNA methylase HFD79_06625 PF01180 Dihydroorotate dehydrogenase HFD79_06630 PF02674 Colicin V production protein HFD79_06635 PF00156 Phosphoribosyl transferase domain HFD79_06650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HFD79_06650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HFD79_06655 PF01435 Peptidase family M48 HFD79_06660 PF09424 Yqey-like protein HFD79_06665 PF01165 Ribosomal protein S21 HFD79_06670 PF00814 Glycoprotease family HFD79_06690 PF00069 Protein kinase domain HFD79_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_06715 PF03466 LysR substrate binding domain HFD79_06720 PF00202 Aminotransferase class-III HFD79_06725 PF00171 Aldehyde dehydrogenase family HFD79_06730 PF00324 Amino acid permease HFD79_06760 PF04076 Bacterial OB fold (BOF) protein HFD79_06785 PF00561 alpha/beta hydrolase fold HFD79_06790 PF03616 Sodium/glutamate symporter HFD79_06800 PF07729 FCD domain HFD79_06800 PF00392 Bacterial regulatory proteins, gntR family HFD79_06850 PF08946 Osmosensory transporter coiled coil HFD79_06850 PF00083 Sugar (and other) transporter HFD79_06870 PF00155 Aminotransferase class I and II HFD79_06875 PF02080 TrkA-C domain HFD79_06875 PF06826 Predicted Permease Membrane Region HFD79_06885 PF04403 Paraquat-inducible protein A HFD79_06890 PF02470 MlaD protein HFD79_06900 PF01177 Asp/Glu/Hydantoin racemase HFD79_06905 PF00892 EamA-like transporter family HFD79_06910 PF07995 Glucose / Sorbosone dehydrogenase HFD79_06920 PF13610 DDE domain HFD79_06930 PF01636 Phosphotransferase enzyme family HFD79_06935 PF13610 DDE domain HFD79_06940 PF00589 Phage integrase family HFD79_06940 PF13495 Phage integrase, N-terminal SAM-like domain HFD79_06950 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_06955 PF13427 Domain of unknown function (DUF4111) HFD79_06955 PF01909 Nucleotidyltransferase domain HFD79_06965 PF13610 DDE domain HFD79_06980 PF00375 Sodium:dicarboxylate symporter family HFD79_06990 PF16123 Hydroxyacylglutathione hydrolase C-terminus HFD79_06990 PF00753 Metallo-beta-lactamase superfamily HFD79_06995 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_07000 PF09383 NIL domain HFD79_07000 PF00005 ABC transporter HFD79_07005 PF03180 NLPA lipoprotein HFD79_07010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HFD79_07010 PF02844 Phosphoribosylglycinamide synthetase, N domain HFD79_07010 PF02843 Phosphoribosylglycinamide synthetase, C domain HFD79_07015 PF01808 AICARFT/IMPCHase bienzyme HFD79_07015 PF02142 MGS-like domain HFD79_07020 PF02954 Bacterial regulatory protein, Fis family HFD79_07040 PF01134 Glucose inhibited division protein A HFD79_07040 PF13932 GidA associated domain HFD79_07050 PF14403 Circularly permuted ATP-grasp type 2 HFD79_07060 PF01841 Transglutaminase-like superfamily HFD79_07060 PF08379 Bacterial transglutaminase-like N-terminal region HFD79_07070 PF00842 Alanine racemase, C-terminal domain HFD79_07070 PF01168 Alanine racemase, N-terminal domain HFD79_07075 PF03796 DnaB-like helicase C terminal domain HFD79_07075 PF00772 DnaB-like helicase N terminal domain HFD79_07080 PF01281 Ribosomal protein L9, N-terminal domain HFD79_07080 PF03948 Ribosomal protein L9, C-terminal domain HFD79_07085 PF01084 Ribosomal protein S18 HFD79_07090 PF01250 Ribosomal protein S6 HFD79_07095 PF01040 UbiA prenyltransferase family HFD79_07100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HFD79_07105 PF00510 Cytochrome c oxidase subunit III HFD79_07110 PF00115 Cytochrome C and Quinol oxidase polypeptide I HFD79_07115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HFD79_07115 PF06481 COX Aromatic Rich Motif HFD79_07125 PF02896 PEP-utilising enzyme, TIM barrel domain HFD79_07125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HFD79_07125 PF00391 PEP-utilising enzyme, mobile domain HFD79_07130 PF03618 Kinase/pyrophosphorylase HFD79_07140 PF14883 Hypothetical glycosyl hydrolase family 13 HFD79_07140 PF01522 Polysaccharide deacetylase HFD79_07145 PF00535 Glycosyl transferase family 2 HFD79_07150 PF13994 PgaD-like protein HFD79_07160 PF00296 Luciferase-like monooxygenase HFD79_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_07175 PF03466 LysR substrate binding domain HFD79_07185 PF00472 RF-1 domain HFD79_07185 PF03462 PCRF domain HFD79_07190 PF13847 Methyltransferase domain HFD79_07190 PF17827 PrmC N-terminal domain HFD79_07195 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_07200 PF09084 NMT1/THI5 like HFD79_07205 PF12833 Helix-turn-helix domain HFD79_07210 PF00106 short chain dehydrogenase HFD79_07215 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_07215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_07215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_07220 PF00501 AMP-binding enzyme HFD79_07220 PF13193 AMP-binding enzyme C-terminal domain HFD79_07225 PF01613 Flavin reductase like domain HFD79_07230 PF00899 ThiF family HFD79_07235 PF03109 ABC1 family HFD79_07250 PF03814 Potassium-transporting ATPase A subunit HFD79_07260 PF02669 K+-transporting ATPase, c chain HFD79_07265 PF02702 Osmosensitive K+ channel His kinase sensor domain HFD79_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_07265 PF00512 His Kinase A (phospho-acceptor) domain HFD79_07265 PF13493 Domain of unknown function (DUF4118) HFD79_07270 PF00486 Transcriptional regulatory protein, C terminal HFD79_07270 PF00072 Response regulator receiver domain HFD79_07275 PF00120 Glutamine synthetase, catalytic domain HFD79_07285 PF03232 Ubiquinone biosynthesis protein COQ7 HFD79_07290 PF07690 Major Facilitator Superfamily HFD79_07295 PF07244 Surface antigen variable number repeat HFD79_07295 PF01103 Surface antigen HFD79_07295 PF17243 POTRA domain TamA domain 1 HFD79_07310 PF06434 Aconitate hydratase 2 N-terminus HFD79_07310 PF00330 Aconitase family (aconitate hydratase) HFD79_07310 PF11791 Aconitate B N-terminal domain HFD79_07320 PF00520 Ion transport protein HFD79_07320 PF00027 Cyclic nucleotide-binding domain HFD79_07325 PF07690 Major Facilitator Superfamily HFD79_07340 PF03466 LysR substrate binding domain HFD79_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_07345 PF04284 Protein of unknown function (DUF441) HFD79_07355 PF00849 RNA pseudouridylate synthase HFD79_07355 PF01479 S4 domain HFD79_07370 PF01479 S4 domain HFD79_07370 PF00849 RNA pseudouridylate synthase HFD79_07375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HFD79_07380 PF08676 MutL C terminal dimerisation domain HFD79_07380 PF01119 DNA mismatch repair protein, C-terminal domain HFD79_07390 PF17209 Hfq protein HFD79_07400 PF00881 Nitroreductase family HFD79_07410 PF00149 Calcineurin-like phosphoesterase HFD79_07415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HFD79_07420 PF00749 tRNA synthetases class I (E and Q), catalytic domain HFD79_07420 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HFD79_07425 PF00117 Glutamine amidotransferase class-I HFD79_07425 PF00958 GMP synthase C terminal domain HFD79_07425 PF02540 NAD synthase HFD79_07430 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HFD79_07435 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HFD79_07440 PF13520 Amino acid permease HFD79_07445 PF00171 Aldehyde dehydrogenase family HFD79_07460 PF00465 Iron-containing alcohol dehydrogenase HFD79_07465 PF05970 PIF1-like helicase HFD79_07465 PF14493 Helix-turn-helix domain HFD79_07475 PF06445 GyrI-like small molecule binding domain HFD79_07480 PF02110 Hydroxyethylthiazole kinase family HFD79_07495 PF11940 Domain of unknown function (DUF3458) Ig-like fold HFD79_07495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HFD79_07495 PF01433 Peptidase family M1 domain HFD79_07505 PF00106 short chain dehydrogenase HFD79_07515 PF01817 Chorismate mutase type II HFD79_07520 PF01037 Lrp/AsnC ligand binding domain HFD79_07530 PF00440 Bacterial regulatory proteins, tetR family HFD79_07535 PF07715 TonB-dependent Receptor Plug Domain HFD79_07535 PF00593 TonB dependent receptor HFD79_07540 PF00924 Mechanosensitive ion channel HFD79_07575 PF00593 TonB dependent receptor HFD79_07575 PF07715 TonB-dependent Receptor Plug Domain HFD79_07595 PF12848 ABC transporter HFD79_07595 PF00005 ABC transporter HFD79_07600 PF00582 Universal stress protein family HFD79_07625 PF00689 Cation transporting ATPase, C-terminus HFD79_07625 PF00690 Cation transporter/ATPase, N-terminus HFD79_07630 PF02308 MgtC family HFD79_07635 PF03594 Benzoate membrane transport protein HFD79_07640 PF01037 Lrp/AsnC ligand binding domain HFD79_07645 PF01810 LysE type translocator HFD79_07650 PF00923 Transaldolase/Fructose-6-phosphate aldolase HFD79_07655 PF03466 LysR substrate binding domain HFD79_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_07665 PF00108 Thiolase, N-terminal domain HFD79_07665 PF02803 Thiolase, C-terminal domain HFD79_07675 PF01575 MaoC like domain HFD79_07690 PF07690 Major Facilitator Superfamily HFD79_07695 PF12169 DNA polymerase III subunits gamma and tau domain III HFD79_07695 PF12170 DNA polymerase III tau subunit V interacting with alpha HFD79_07695 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HFD79_07700 PF04185 Phosphoesterase family HFD79_07700 PF05506 Domain of unknown function (DUF756) HFD79_07705 PF03061 Thioesterase superfamily HFD79_07710 PF00465 Iron-containing alcohol dehydrogenase HFD79_07720 PF01451 Low molecular weight phosphotyrosine protein phosphatase HFD79_07725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HFD79_07725 PF01565 FAD binding domain HFD79_07740 PF01645 Conserved region in glutamate synthase HFD79_07760 PF12832 MFS_1 like family HFD79_07770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_07770 PF02785 Biotin carboxylase C-terminal domain HFD79_07770 PF00289 Biotin carboxylase, N-terminal domain HFD79_07775 PF00364 Biotin-requiring enzyme HFD79_07780 PF01220 Dehydroquinase class II HFD79_07785 PF13438 Domain of unknown function (DUF4113) HFD79_07785 PF00817 impB/mucB/samB family HFD79_07785 PF11799 impB/mucB/samB family C-terminal domain HFD79_07795 PF00005 ABC transporter HFD79_07800 PF00486 Transcriptional regulatory protein, C terminal HFD79_07800 PF00072 Response regulator receiver domain HFD79_07810 PF04324 BFD-like [2Fe-2S] binding domain HFD79_07810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HFD79_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_07810 PF18267 Rubredoxin NAD+ reductase C-terminal domain HFD79_07810 PF13806 Rieske-like [2Fe-2S] domain HFD79_07810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HFD79_07815 PF04324 BFD-like [2Fe-2S] binding domain HFD79_07815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HFD79_07815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HFD79_07815 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_07815 PF18267 Rubredoxin NAD+ reductase C-terminal domain HFD79_07820 PF04324 BFD-like [2Fe-2S] binding domain HFD79_07820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HFD79_07820 PF00384 Molybdopterin oxidoreductase HFD79_07820 PF01568 Molydopterin dinucleotide binding domain HFD79_07825 PF12804 MobA-like NTP transferase domain HFD79_07830 PF01568 Molydopterin dinucleotide binding domain HFD79_07830 PF00384 Molybdopterin oxidoreductase HFD79_07830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HFD79_07835 PF04055 Radical SAM superfamily HFD79_07835 PF06463 Molybdenum Cofactor Synthesis C HFD79_07845 PF02391 MoaE protein HFD79_07850 PF01967 MoaC family HFD79_07850 PF00994 Probable molybdopterin binding domain HFD79_07855 PF00994 Probable molybdopterin binding domain HFD79_07855 PF03453 MoeA N-terminal region (domain I and II) HFD79_07855 PF03454 MoeA C-terminal region (domain IV) HFD79_07860 PF01638 HxlR-like helix-turn-helix HFD79_07865 PF00392 Bacterial regulatory proteins, gntR family HFD79_07865 PF00155 Aminotransferase class I and II HFD79_07870 PF00892 EamA-like transporter family HFD79_07890 PF02635 DsrE/DsrF-like family HFD79_07895 PF16363 GDP-mannose 4,6 dehydratase HFD79_07900 PF10415 Fumarase C C-terminus HFD79_07900 PF00206 Lyase HFD79_07920 PF01266 FAD dependent oxidoreductase HFD79_07930 PF02542 YgbB family HFD79_07940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HFD79_07940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HFD79_07945 PF00440 Bacterial regulatory proteins, tetR family HFD79_07950 PF02954 Bacterial regulatory protein, Fis family HFD79_07950 PF00158 Sigma-54 interaction domain HFD79_07950 PF00072 Response regulator receiver domain HFD79_07955 PF00989 PAS fold HFD79_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_07955 PF00512 His Kinase A (phospho-acceptor) domain HFD79_07960 PF04055 Radical SAM superfamily HFD79_07960 PF18693 TRAM domain HFD79_07960 PF00919 Uncharacterized protein family UPF0004 HFD79_07965 PF00696 Amino acid kinase family HFD79_07970 PF01765 Ribosome recycling factor HFD79_07975 PF01255 Putative undecaprenyl diphosphate synthase HFD79_07985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HFD79_07985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HFD79_07985 PF13288 DXP reductoisomerase C-terminal domain HFD79_07990 PF02163 Peptidase family M50 HFD79_07990 PF13180 PDZ domain HFD79_07990 PF17820 PDZ domain HFD79_07995 PF01103 Surface antigen HFD79_07995 PF07244 Surface antigen variable number repeat HFD79_08005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HFD79_08005 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_08010 PF07977 FabA-like domain HFD79_08015 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_08015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HFD79_08030 PF02631 RecX family HFD79_08035 PF00154 recA bacterial DNA recombination protein HFD79_08040 PF01479 S4 domain HFD79_08045 PF13419 Haloacid dehalogenase-like hydrolase HFD79_08070 PF01037 Lrp/AsnC ligand binding domain HFD79_08075 PF00266 Aminotransferase class-V HFD79_08080 PF00324 Amino acid permease HFD79_08090 PF05922 Peptidase inhibitor I9 HFD79_08090 PF00082 Subtilase family HFD79_08095 PF00916 Sulfate permease family HFD79_08095 PF01740 STAS domain HFD79_08100 PF02586 SOS response associated peptidase (SRAP) HFD79_08105 PF07995 Glucose / Sorbosone dehydrogenase HFD79_08115 PF00563 EAL domain HFD79_08115 PF03707 Bacterial signalling protein N terminal repeat HFD79_08115 PF00990 Diguanylate cyclase, GGDEF domain HFD79_08135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HFD79_08135 PF02378 Phosphotransferase system, EIIC HFD79_08140 PF00294 pfkB family carbohydrate kinase HFD79_08145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HFD79_08145 PF00381 PTS HPr component phosphorylation site HFD79_08145 PF02896 PEP-utilising enzyme, TIM barrel domain HFD79_08145 PF00391 PEP-utilising enzyme, mobile domain HFD79_08145 PF05524 PEP-utilising enzyme, N-terminal HFD79_08170 PF05525 Branched-chain amino acid transport protein HFD79_08175 PF00557 Metallopeptidase family M24 HFD79_08180 PF03466 LysR substrate binding domain HFD79_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_08190 PF00462 Glutaredoxin HFD79_08195 PF00202 Aminotransferase class-III HFD79_08200 PF00478 IMP dehydrogenase / GMP reductase domain HFD79_08200 PF00571 CBS domain HFD79_08225 PF00448 SRP54-type protein, GTPase domain HFD79_08225 PF02881 SRP54-type protein, helical bundle domain HFD79_08235 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HFD79_08250 PF08173 Membrane bound YbgT-like protein HFD79_08255 PF02322 Cytochrome bd terminal oxidase subunit II HFD79_08260 PF01654 Cytochrome bd terminal oxidase subunit I HFD79_08270 PF07290 Protein of unknown function (DUF1449) HFD79_08280 PF00294 pfkB family carbohydrate kinase HFD79_08285 PF07715 TonB-dependent Receptor Plug Domain HFD79_08285 PF00593 TonB dependent receptor HFD79_08290 PF08367 Peptidase M16C associated HFD79_08290 PF05193 Peptidase M16 inactive domain HFD79_08290 PF00675 Insulinase (Peptidase family M16) HFD79_08295 PF02253 Phospholipase A1 HFD79_08300 PF02386 Cation transport protein HFD79_08305 PF02080 TrkA-C domain HFD79_08305 PF02254 TrkA-N domain HFD79_08310 PF00585 C-terminal regulatory domain of Threonine dehydratase HFD79_08310 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_08315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HFD79_08330 PF01118 Semialdehyde dehydrogenase, NAD binding domain HFD79_08330 PF02774 Semialdehyde dehydrogenase, dimerisation domain HFD79_08340 PF02617 ATP-dependent Clp protease adaptor protein ClpS HFD79_08345 PF02861 Clp amino terminal domain, pathogenicity island component HFD79_08345 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_08345 PF07724 AAA domain (Cdc48 subfamily) HFD79_08345 PF17871 AAA lid domain HFD79_08345 PF10431 C-terminal, D2-small domain, of ClpB protein HFD79_08350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HFD79_08355 PF00793 DAHP synthetase I family HFD79_08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_08370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_08400 PF06418 CTP synthase N-terminus HFD79_08400 PF00117 Glutamine amidotransferase class-I HFD79_08405 PF00793 DAHP synthetase I family HFD79_08410 PF00113 Enolase, C-terminal TIM barrel domain HFD79_08410 PF03952 Enolase, N-terminal domain HFD79_08415 PF04239 Protein of unknown function (DUF421) HFD79_08420 PF04977 Septum formation initiator HFD79_08425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HFD79_08430 PF01144 Coenzyme A transferase HFD79_08435 PF01144 Coenzyme A transferase HFD79_08440 PF02803 Thiolase, C-terminal domain HFD79_08440 PF00108 Thiolase, N-terminal domain HFD79_08445 PF00206 Lyase HFD79_08445 PF10397 Adenylosuccinate lyase C-terminus HFD79_08450 PF00561 alpha/beta hydrolase fold HFD79_08455 PF07690 Major Facilitator Superfamily HFD79_08460 PF02627 Carboxymuconolactone decarboxylase family HFD79_08465 PF00775 Dioxygenase HFD79_08465 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HFD79_08470 PF00775 Dioxygenase HFD79_08475 PF01487 Type I 3-dehydroquinase HFD79_08480 PF05048 Periplasmic copper-binding protein (NosD) HFD79_08485 PF04966 Carbohydrate-selective porin, OprB family HFD79_08490 PF13360 PQQ-like domain HFD79_08490 PF01011 PQQ enzyme repeat HFD79_08500 PF04143 Sulphur transport HFD79_08510 PF00753 Metallo-beta-lactamase superfamily HFD79_08515 PF09339 IclR helix-turn-helix domain HFD79_08515 PF01614 Bacterial transcriptional regulator HFD79_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_08520 PF03466 LysR substrate binding domain HFD79_08525 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_08525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_08525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_08540 PF00106 short chain dehydrogenase HFD79_08550 PF07690 Major Facilitator Superfamily HFD79_08560 PF01425 Amidase HFD79_08565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HFD79_08580 PF00355 Rieske [2Fe-2S] domain HFD79_08580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HFD79_08595 PF00175 Oxidoreductase NAD-binding domain HFD79_08595 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_08600 PF01613 Flavin reductase like domain HFD79_08605 PF02311 AraC-like ligand binding domain HFD79_08605 PF12833 Helix-turn-helix domain HFD79_08610 PF02728 Copper amine oxidase, N3 domain HFD79_08610 PF02727 Copper amine oxidase, N2 domain HFD79_08610 PF07833 Copper amine oxidase N-terminal domain HFD79_08610 PF01179 Copper amine oxidase, enzyme domain HFD79_08620 PF00171 Aldehyde dehydrogenase family HFD79_08625 PF01804 Penicillin amidase HFD79_08630 PF12146 Serine aminopeptidase, S33 HFD79_08635 PF00108 Thiolase, N-terminal domain HFD79_08635 PF02803 Thiolase, C-terminal domain HFD79_08640 PF01144 Coenzyme A transferase HFD79_08645 PF01144 Coenzyme A transferase HFD79_08650 PF04444 Catechol dioxygenase N terminus HFD79_08650 PF00775 Dioxygenase HFD79_08655 PF02426 Muconolactone delta-isomerase HFD79_08660 PF13378 Enolase C-terminal domain-like HFD79_08660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HFD79_08665 PF03466 LysR substrate binding domain HFD79_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_08675 PF07729 FCD domain HFD79_08675 PF00392 Bacterial regulatory proteins, gntR family HFD79_08680 PF00920 Dehydratase family HFD79_08685 PF07690 Major Facilitator Superfamily HFD79_08695 PF00171 Aldehyde dehydrogenase family HFD79_08715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_08715 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_08715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_08725 PF06506 Propionate catabolism activator HFD79_08725 PF02954 Bacterial regulatory protein, Fis family HFD79_08725 PF00158 Sigma-54 interaction domain HFD79_08730 PF13193 AMP-binding enzyme C-terminal domain HFD79_08730 PF00501 AMP-binding enzyme HFD79_08735 PF04341 Protein of unknown function, DUF485 HFD79_08740 PF00474 Sodium:solute symporter family HFD79_08745 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_08745 PF00107 Zinc-binding dehydrogenase HFD79_08750 PF00171 Aldehyde dehydrogenase family HFD79_08760 PF00561 alpha/beta hydrolase fold HFD79_08765 PF06628 Catalase-related immune-responsive HFD79_08765 PF00199 Catalase HFD79_08780 PF07859 alpha/beta hydrolase fold HFD79_08785 PF01047 MarR family HFD79_08790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_08790 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_08795 PF00106 short chain dehydrogenase HFD79_08800 PF01872 RibD C-terminal domain HFD79_08805 PF09278 MerR, DNA binding HFD79_08805 PF00376 MerR family regulatory protein HFD79_08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_08825 PF12706 Beta-lactamase superfamily domain HFD79_08830 PF00440 Bacterial regulatory proteins, tetR family HFD79_08830 PF08359 YsiA-like protein, C-terminal region HFD79_08840 PF00857 Isochorismatase family HFD79_08845 PF03466 LysR substrate binding domain HFD79_08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_08850 PF07995 Glucose / Sorbosone dehydrogenase HFD79_08855 PF00999 Sodium/hydrogen exchanger family HFD79_08855 PF02254 TrkA-N domain HFD79_08865 PF01546 Peptidase family M20/M25/M40 HFD79_08865 PF07687 Peptidase dimerisation domain HFD79_08875 PF17287 POTRA domain HFD79_08875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HFD79_08875 PF08479 POTRA domain, ShlB-type HFD79_08880 PF04829 Pre-toxin domain with VENN motif HFD79_08880 PF05860 haemagglutination activity domain HFD79_08880 PF13018 Extended Signal Peptide of Type V secretion system HFD79_08880 PF13332 Hemagglutinin repeat HFD79_08895 PF07690 Major Facilitator Superfamily HFD79_08900 PF04909 Amidohydrolase HFD79_08910 PF07702 UTRA domain HFD79_08910 PF00392 Bacterial regulatory proteins, gntR family HFD79_08915 PF08450 SMP-30/Gluconolactonase/LRE-like region HFD79_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_08925 PF03466 LysR substrate binding domain HFD79_08945 PF07690 Major Facilitator Superfamily HFD79_08950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HFD79_08950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HFD79_08950 PF01842 ACT domain HFD79_08955 PF03737 Aldolase/RraA HFD79_08975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_08975 PF00529 HlyD membrane-fusion protein of T1SS HFD79_08990 PF00171 Aldehyde dehydrogenase family HFD79_08995 PF00920 Dehydratase family HFD79_09005 PF03466 LysR substrate binding domain HFD79_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_09010 PF01370 NAD dependent epimerase/dehydratase family HFD79_09015 PF07690 Major Facilitator Superfamily HFD79_09020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HFD79_09020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HFD79_09025 PF06719 AraC-type transcriptional regulator N-terminus HFD79_09025 PF12833 Helix-turn-helix domain HFD79_09040 PF00107 Zinc-binding dehydrogenase HFD79_09040 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_09055 PF00005 ABC transporter HFD79_09075 PF14572 Phosphoribosyl synthetase-associated domain HFD79_09075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HFD79_09080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HFD79_09150 PF00196 Bacterial regulatory proteins, luxR family HFD79_09155 PF01425 Amidase HFD79_09160 PF13533 Biotin-lipoyl like HFD79_09165 PF07690 Major Facilitator Superfamily HFD79_09190 PF01975 Survival protein SurE HFD79_09200 PF13291 ACT domain HFD79_09200 PF02824 TGS domain HFD79_09200 PF04607 Region found in RelA / SpoT proteins HFD79_09250 PF12146 Serine aminopeptidase, S33 HFD79_09255 PF02311 AraC-like ligand binding domain HFD79_09255 PF12833 Helix-turn-helix domain HFD79_09265 PF00512 His Kinase A (phospho-acceptor) domain HFD79_09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_09265 PF16527 Two-component sensor protein CpxA, periplasmic domain HFD79_09265 PF00672 HAMP domain HFD79_09270 PF00486 Transcriptional regulatory protein, C terminal HFD79_09270 PF00072 Response regulator receiver domain HFD79_09275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_09275 PF00529 HlyD membrane-fusion protein of T1SS HFD79_09280 PF00873 AcrB/AcrD/AcrF family HFD79_09285 PF02321 Outer membrane efflux protein HFD79_09290 PF12146 Serine aminopeptidase, S33 HFD79_09295 PF00743 Flavin-binding monooxygenase-like HFD79_09300 PF01593 Flavin containing amine oxidoreductase HFD79_09315 PF01266 FAD dependent oxidoreductase HFD79_09335 PF16970 Type-1 fimbrial protein, A HFD79_09345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HFD79_09345 PF02753 Pili assembly chaperone PapD, C-terminal domain HFD79_09350 PF00577 Outer membrane usher protein HFD79_09350 PF13953 PapC C-terminal domain HFD79_09350 PF13954 PapC N-terminal domain HFD79_09355 PF00419 Fimbrial protein HFD79_09365 PF00107 Zinc-binding dehydrogenase HFD79_09365 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_09375 PF00199 Catalase HFD79_09390 PF13091 PLD-like domain HFD79_09410 PF01244 Membrane dipeptidase (Peptidase family M19) HFD79_09415 PF13186 Iron-sulfur cluster-binding domain HFD79_09415 PF04055 Radical SAM superfamily HFD79_09420 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HFD79_09425 PF03070 TENA/THI-4/PQQC family HFD79_09430 PF12706 Beta-lactamase superfamily domain HFD79_09435 PF08042 PqqA family HFD79_09440 PF02503 Polyphosphate kinase middle domain HFD79_09440 PF13090 Polyphosphate kinase C-terminal domain 2 HFD79_09440 PF17941 Polyphosphate kinase C-terminal domain 1 HFD79_09440 PF13089 Polyphosphate kinase N-terminal domain HFD79_09445 PF00149 Calcineurin-like phosphoesterase HFD79_09455 PF00550 Phosphopantetheine attachment site HFD79_09455 PF00857 Isochorismatase family HFD79_09460 PF00106 short chain dehydrogenase HFD79_09465 PF00005 ABC transporter HFD79_09465 PF03459 TOBE domain HFD79_09470 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_09480 PF03459 TOBE domain HFD79_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_09485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HFD79_09485 PF00355 Rieske [2Fe-2S] domain HFD79_09490 PF00866 Ring hydroxylating beta subunit HFD79_09495 PF00175 Oxidoreductase NAD-binding domain HFD79_09495 PF00970 Oxidoreductase FAD-binding domain HFD79_09495 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_09500 PF14525 AraC-binding-like domain HFD79_09500 PF12833 Helix-turn-helix domain HFD79_09510 PF01613 Flavin reductase like domain HFD79_09525 PF01738 Dienelactone hydrolase family HFD79_09530 PF07690 Major Facilitator Superfamily HFD79_09535 PF06719 AraC-type transcriptional regulator N-terminus HFD79_09535 PF12833 Helix-turn-helix domain HFD79_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_09560 PF03466 LysR substrate binding domain HFD79_09565 PF01144 Coenzyme A transferase HFD79_09570 PF01144 Coenzyme A transferase HFD79_09575 PF02667 Short chain fatty acid transporter HFD79_09580 PF02803 Thiolase, C-terminal domain HFD79_09580 PF00108 Thiolase, N-terminal domain HFD79_09585 PF03466 LysR substrate binding domain HFD79_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_09590 PF03466 LysR substrate binding domain HFD79_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_09605 PF00206 Lyase HFD79_09605 PF10415 Fumarase C C-terminus HFD79_09610 PF00593 TonB dependent receptor HFD79_09610 PF07715 TonB-dependent Receptor Plug Domain HFD79_09615 PF00083 Sugar (and other) transporter HFD79_09630 PF00005 ABC transporter HFD79_09635 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_09640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HFD79_09655 PF07702 UTRA domain HFD79_09655 PF00392 Bacterial regulatory proteins, gntR family HFD79_09665 PF02525 Flavodoxin-like fold HFD79_09670 PF01638 HxlR-like helix-turn-helix HFD79_09675 PF12833 Helix-turn-helix domain HFD79_09675 PF06445 GyrI-like small molecule binding domain HFD79_09690 PF01925 Sulfite exporter TauE/SafE HFD79_09695 PF00753 Metallo-beta-lactamase superfamily HFD79_09695 PF04273 Putative phosphatase (DUF442) HFD79_09700 PF04273 Putative phosphatase (DUF442) HFD79_09700 PF00753 Metallo-beta-lactamase superfamily HFD79_09705 PF02954 Bacterial regulatory protein, Fis family HFD79_09705 PF00072 Response regulator receiver domain HFD79_09705 PF00158 Sigma-54 interaction domain HFD79_09710 PF01062 Bestrophin, RFP-TM, chloride channel HFD79_09715 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_09715 PF00107 Zinc-binding dehydrogenase HFD79_09720 PF00106 short chain dehydrogenase HFD79_09725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HFD79_09725 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_09730 PF00364 Biotin-requiring enzyme HFD79_09730 PF02817 e3 binding domain HFD79_09730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HFD79_09735 PF02780 Transketolase, C-terminal domain HFD79_09735 PF02779 Transketolase, pyrimidine binding domain HFD79_09740 PF00676 Dehydrogenase E1 component HFD79_09745 PF04055 Radical SAM superfamily HFD79_09760 PF00990 Diguanylate cyclase, GGDEF domain HFD79_09760 PF08448 PAS fold HFD79_09765 PF01264 Chorismate synthase HFD79_09770 PF05175 Methyltransferase small domain HFD79_09775 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_09785 PF17862 AAA+ lid domain HFD79_09785 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_09785 PF01434 Peptidase family M41 HFD79_09795 PF05166 YcgL domain HFD79_09815 PF00570 HRDC domain HFD79_09815 PF01612 3'-5' exonuclease HFD79_09820 PF02132 RecR protein HFD79_09820 PF13662 Toprim domain HFD79_09825 PF02575 YbaB/EbfC DNA-binding family HFD79_09835 PF01053 Cys/Met metabolism PLP-dependent enzyme HFD79_09840 PF00561 alpha/beta hydrolase fold HFD79_09880 PF01230 HIT domain HFD79_09915 PF00005 ABC transporter HFD79_09920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_09930 PF02684 Lipid-A-disaccharide synthetase HFD79_09935 PF00593 TonB dependent receptor HFD79_09935 PF07715 TonB-dependent Receptor Plug Domain HFD79_09955 PF01925 Sulfite exporter TauE/SafE HFD79_09960 PF00793 DAHP synthetase I family HFD79_09965 PF02654 Cobalamin-5-phosphate synthase HFD79_09980 PF02277 Phosphoribosyltransferase HFD79_09985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HFD79_10020 PF00593 TonB dependent receptor HFD79_10020 PF07715 TonB-dependent Receptor Plug Domain HFD79_10035 PF04183 IucA / IucC family HFD79_10035 PF06276 Ferric iron reductase FhuF-like transporter HFD79_10040 PF04183 IucA / IucC family HFD79_10040 PF06276 Ferric iron reductase FhuF-like transporter HFD79_10045 PF07690 Major Facilitator Superfamily HFD79_10050 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HFD79_10055 PF06276 Ferric iron reductase FhuF-like transporter HFD79_10055 PF04183 IucA / IucC family HFD79_10060 PF04073 Aminoacyl-tRNA editing domain HFD79_10070 PF03109 ABC1 family HFD79_10075 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_10075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_10075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_10080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_10080 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_10080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_10085 PF00487 Fatty acid desaturase HFD79_10090 PF12852 Cupin HFD79_10090 PF12833 Helix-turn-helix domain HFD79_10095 PF09312 SurA N-terminal domain HFD79_10095 PF00639 PPIC-type PPIASE domain HFD79_10100 PF00216 Bacterial DNA-binding protein HFD79_10115 PF02082 Transcriptional regulator HFD79_10120 PF00266 Aminotransferase class-V HFD79_10125 PF01592 NifU-like N terminal domain HFD79_10130 PF01521 Iron-sulphur cluster biosynthesis HFD79_10135 PF00226 DnaJ domain HFD79_10135 PF07743 HSCB C-terminal oligomerisation domain HFD79_10140 PF00012 Hsp70 protein HFD79_10145 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_10150 PF00211 Adenylate and Guanylate cyclase catalytic domain HFD79_10160 PF17757 UvrB interaction domain HFD79_10160 PF03461 TRCF domain HFD79_10160 PF00270 DEAD/DEAH box helicase HFD79_10160 PF00271 Helicase conserved C-terminal domain HFD79_10160 PF02559 CarD-like/TRCF domain HFD79_10190 PF03737 Aldolase/RraA HFD79_10195 PF13460 NAD(P)H-binding HFD79_10200 PF01649 Ribosomal protein S20 HFD79_10210 PF00459 Inositol monophosphatase family HFD79_10225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HFD79_10225 PF00005 ABC transporter HFD79_10230 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_10235 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_10240 PF01432 Peptidase family M3 HFD79_10260 PF07715 TonB-dependent Receptor Plug Domain HFD79_10260 PF00593 TonB dependent receptor HFD79_10270 PF01618 MotA/TolQ/ExbB proton channel family HFD79_10275 PF02472 Biopolymer transport protein ExbD/TolR HFD79_10280 PF02472 Biopolymer transport protein ExbD/TolR HFD79_10290 PF01274 Malate synthase HFD79_10295 PF03969 AFG1-like ATPase HFD79_10305 PF00743 Flavin-binding monooxygenase-like HFD79_10315 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HFD79_10325 PF00216 Bacterial DNA-binding protein HFD79_10330 PF00575 S1 RNA binding domain HFD79_10335 PF02224 Cytidylate kinase HFD79_10345 PF14437 MafB19-like deaminase HFD79_10355 PF03167 Uracil DNA glycosylase superfamily HFD79_10365 PF03934 Type II secretion system (T2SS), protein K HFD79_10370 PF11612 Type II secretion system (T2SS), protein J HFD79_10370 PF07963 Prokaryotic N-terminal methylation motif HFD79_10375 PF07963 Prokaryotic N-terminal methylation motif HFD79_10375 PF02501 Type II secretion system (T2SS), protein I HFD79_10390 PF01026 TatD related DNase HFD79_10400 PF09115 DNA polymerase III, delta subunit, C terminal HFD79_10405 PF02348 Cytidylyltransferase HFD79_10410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HFD79_10415 PF00005 ABC transporter HFD79_10415 PF00664 ABC transporter transmembrane region HFD79_10425 PF01618 MotA/TolQ/ExbB proton channel family HFD79_10430 PF02195 ParB-like nuclease domain HFD79_10430 PF17762 HTH domain found in ParB protein HFD79_10435 PF13614 AAA domain HFD79_10440 PF02527 rRNA small subunit methyltransferase G HFD79_10445 PF00483 Nucleotidyl transferase HFD79_10450 PF01636 Phosphotransferase enzyme family HFD79_10455 PF03968 OstA-like protein HFD79_10455 PF04453 LPS transport system D HFD79_10460 PF09312 SurA N-terminal domain HFD79_10460 PF00639 PPIC-type PPIASE domain HFD79_10465 PF01116 Fructose-bisphosphate aldolase class-II HFD79_10475 PF00162 Phosphoglycerate kinase HFD79_10485 PF02545 Maf-like protein HFD79_10490 PF08007 Cupin superfamily protein HFD79_10505 PF00375 Sodium:dicarboxylate symporter family HFD79_10510 PF06912 Protein of unknown function (DUF1275) HFD79_10515 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HFD79_10520 PF00005 ABC transporter HFD79_10520 PF00664 ABC transporter transmembrane region HFD79_10530 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HFD79_10530 PF12833 Helix-turn-helix domain HFD79_10535 PF01597 Glycine cleavage H-protein HFD79_10540 PF02146 Sir2 family HFD79_10545 PF00474 Sodium:solute symporter family HFD79_10550 PF01037 Lrp/AsnC ligand binding domain HFD79_10555 PF00171 Aldehyde dehydrogenase family HFD79_10555 PF01619 Proline dehydrogenase HFD79_10555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HFD79_10555 PF14850 DNA-binding domain of Proline dehydrogenase HFD79_10560 PF04229 GrpB protein HFD79_10565 PF05958 tRNA (Uracil-5-)-methyltransferase HFD79_10575 PF09992 Phosphodiester glycosidase HFD79_10585 PF04264 YceI-like domain HFD79_10595 PF02779 Transketolase, pyrimidine binding domain HFD79_10595 PF00456 Transketolase, thiamine diphosphate binding domain HFD79_10595 PF02780 Transketolase, C-terminal domain HFD79_10600 PF00438 S-adenosylmethionine synthetase, N-terminal domain HFD79_10600 PF02773 S-adenosylmethionine synthetase, C-terminal domain HFD79_10600 PF02772 S-adenosylmethionine synthetase, central domain HFD79_10620 PF00905 Penicillin binding protein transpeptidase domain HFD79_10635 PF02075 Crossover junction endodeoxyribonuclease RuvC HFD79_10640 PF01256 Carbohydrate kinase HFD79_10640 PF03853 YjeF-related protein N-terminus HFD79_10645 PF08331 Domain of unknown function (DUF1730) HFD79_10650 PF06968 Biotin and Thiamin Synthesis associated domain HFD79_10650 PF04055 Radical SAM superfamily HFD79_10665 PF16970 Type-1 fimbrial protein, A HFD79_10670 PF02753 Pili assembly chaperone PapD, C-terminal domain HFD79_10670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HFD79_10675 PF00577 Outer membrane usher protein HFD79_10675 PF13954 PapC N-terminal domain HFD79_10675 PF13953 PapC C-terminal domain HFD79_10695 PF00892 EamA-like transporter family HFD79_10705 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HFD79_10715 PF03466 LysR substrate binding domain HFD79_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_10735 PF00440 Bacterial regulatory proteins, tetR family HFD79_10745 PF01709 Transcriptional regulator HFD79_10750 PF01037 Lrp/AsnC ligand binding domain HFD79_10760 PF00005 ABC transporter HFD79_10765 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_10770 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_10785 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HFD79_10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_10795 PF00296 Luciferase-like monooxygenase HFD79_10800 PF03180 NLPA lipoprotein HFD79_10805 PF03180 NLPA lipoprotein HFD79_10810 PF00005 ABC transporter HFD79_10810 PF09383 NIL domain HFD79_10815 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_10820 PF01926 50S ribosome-binding GTPase HFD79_10820 PF06071 Protein of unknown function (DUF933) HFD79_10845 PF03591 AzlC protein HFD79_10850 PF05437 Branched-chain amino acid transport protein (AzlD) HFD79_10860 PF02222 ATP-grasp domain HFD79_10865 PF01909 Nucleotidyltransferase domain HFD79_10865 PF08335 GlnD PII-uridylyltransferase HFD79_10865 PF01966 HD domain HFD79_10870 PF00155 Aminotransferase class I and II HFD79_10880 PF12833 Helix-turn-helix domain HFD79_10880 PF12852 Cupin HFD79_10885 PF00255 Glutathione peroxidase HFD79_10890 PF01641 SelR domain HFD79_10895 PF00155 Aminotransferase class I and II HFD79_10900 PF00375 Sodium:dicarboxylate symporter family HFD79_10905 PF00710 Asparaginase, N-terminal HFD79_10905 PF17763 Glutaminase/Asparaginase C-terminal domain HFD79_10910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HFD79_10910 PF14579 Helix-hairpin-helix motif HFD79_10910 PF07733 Bacterial DNA polymerase III alpha NTPase domain HFD79_10910 PF02811 PHP domain HFD79_10910 PF01336 OB-fold nucleic acid binding domain HFD79_10915 PF00588 SpoU rRNA Methylase family HFD79_10920 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_10935 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_10935 PF13192 Thioredoxin domain HFD79_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_10950 PF03466 LysR substrate binding domain HFD79_10955 PF01758 Sodium Bile acid symporter family HFD79_10960 PF01022 Bacterial regulatory protein, arsR family HFD79_10965 PF03960 ArsC family HFD79_10975 PF01979 Amidohydrolase family HFD79_10975 PF13382 Adenine deaminase C-terminal domain HFD79_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_10985 PF03466 LysR substrate binding domain HFD79_10995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HFD79_11000 PF01177 Asp/Glu/Hydantoin racemase HFD79_11005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HFD79_11010 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_11015 PF00005 ABC transporter HFD79_11020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HFD79_11030 PF00083 Sugar (and other) transporter HFD79_11035 PF00296 Luciferase-like monooxygenase HFD79_11040 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_11040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HFD79_11040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_11050 PF01654 Cytochrome bd terminal oxidase subunit I HFD79_11055 PF02322 Cytochrome bd terminal oxidase subunit II HFD79_11065 PF00155 Aminotransferase class I and II HFD79_11065 PF00392 Bacterial regulatory proteins, gntR family HFD79_11070 PF03466 LysR substrate binding domain HFD79_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11085 PF00698 Acyl transferase domain HFD79_11090 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HFD79_11100 PF01039 Carboxyl transferase domain HFD79_11105 PF06857 Malonate decarboxylase delta subunit (MdcD) HFD79_11110 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HFD79_11115 PF16957 Malonate decarboxylase, alpha subunit, transporter HFD79_11120 PF07690 Major Facilitator Superfamily HFD79_11135 PF00155 Aminotransferase class I and II HFD79_11135 PF00392 Bacterial regulatory proteins, gntR family HFD79_11140 PF04172 LrgB-like family HFD79_11145 PF03788 LrgA family HFD79_11150 PF03466 LysR substrate binding domain HFD79_11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11155 PF02798 Glutathione S-transferase, N-terminal domain HFD79_11155 PF14834 Glutathione S-transferase, C-terminal domain HFD79_11160 PF02798 Glutathione S-transferase, N-terminal domain HFD79_11165 PF03466 LysR substrate binding domain HFD79_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11175 PF00581 Rhodanese-like domain HFD79_11180 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_11190 PF00266 Aminotransferase class-V HFD79_11200 PF01810 LysE type translocator HFD79_11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11205 PF03466 LysR substrate binding domain HFD79_11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 HFD79_11220 PF00497 Bacterial extracellular solute-binding proteins, family 3 HFD79_11225 PF00005 ABC transporter HFD79_11230 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_11235 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_11250 PF00072 Response regulator receiver domain HFD79_11255 PF00072 Response regulator receiver domain HFD79_11255 PF09308 LuxQ, periplasmic HFD79_11255 PF00512 His Kinase A (phospho-acceptor) domain HFD79_11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_11265 PF01037 Lrp/AsnC ligand binding domain HFD79_11265 PF13404 AsnC-type helix-turn-helix domain HFD79_11275 PF00717 Peptidase S24-like HFD79_11300 PF00199 Catalase HFD79_11300 PF18011 C-terminal domain found in long catalases HFD79_11300 PF06628 Catalase-related immune-responsive HFD79_11310 PF02464 Competence-damaged protein HFD79_11310 PF18146 Damage-inducible protein CinA KH domain HFD79_11310 PF00994 Probable molybdopterin binding domain HFD79_11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11345 PF03466 LysR substrate binding domain HFD79_11365 PF00501 AMP-binding enzyme HFD79_11365 PF13193 AMP-binding enzyme C-terminal domain HFD79_11370 PF00440 Bacterial regulatory proteins, tetR family HFD79_11375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_11375 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_11375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_11380 PF01039 Carboxyl transferase domain HFD79_11385 PF00378 Enoyl-CoA hydratase/isomerase HFD79_11390 PF00364 Biotin-requiring enzyme HFD79_11390 PF02785 Biotin carboxylase C-terminal domain HFD79_11390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_11390 PF18140 Propionyl-coenzyme A carboxylase BT domain HFD79_11390 PF00289 Biotin carboxylase, N-terminal domain HFD79_11395 PF00682 HMGL-like HFD79_11400 PF03466 LysR substrate binding domain HFD79_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11415 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_11415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_11415 PF12806 Acetyl-CoA dehydrogenase C-terminal like HFD79_11415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_11425 PF07690 Major Facilitator Superfamily HFD79_11435 PF01144 Coenzyme A transferase HFD79_11440 PF01144 Coenzyme A transferase HFD79_11445 PF07690 Major Facilitator Superfamily HFD79_11450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_11450 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_11450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_11455 PF00378 Enoyl-CoA hydratase/isomerase HFD79_11465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HFD79_11465 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HFD79_11465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HFD79_11470 PF02803 Thiolase, C-terminal domain HFD79_11470 PF00108 Thiolase, N-terminal domain HFD79_11475 PF09339 IclR helix-turn-helix domain HFD79_11480 PF07690 Major Facilitator Superfamily HFD79_11485 PF03060 Nitronate monooxygenase HFD79_11490 PF00378 Enoyl-CoA hydratase/isomerase HFD79_11495 PF09339 IclR helix-turn-helix domain HFD79_11500 PF02515 CoA-transferase family III HFD79_11505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_11505 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_11505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_11510 PF07690 Major Facilitator Superfamily HFD79_11515 PF13419 Haloacid dehalogenase-like hydrolase HFD79_11520 PF00266 Aminotransferase class-V HFD79_11525 PF01266 FAD dependent oxidoreductase HFD79_11530 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_11535 PF00005 ABC transporter HFD79_11535 PF08402 TOBE domain HFD79_11545 PF07702 UTRA domain HFD79_11545 PF00392 Bacterial regulatory proteins, gntR family HFD79_11550 PF01494 FAD binding domain HFD79_11555 PF01614 Bacterial transcriptional regulator HFD79_11555 PF09339 IclR helix-turn-helix domain HFD79_11560 PF02525 Flavodoxin-like fold HFD79_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11565 PF03466 LysR substrate binding domain HFD79_11570 PF02627 Carboxymuconolactone decarboxylase family HFD79_11575 PF00171 Aldehyde dehydrogenase family HFD79_11585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HFD79_11595 PF00171 Aldehyde dehydrogenase family HFD79_11600 PF00296 Luciferase-like monooxygenase HFD79_11605 PF01613 Flavin reductase like domain HFD79_11610 PF12697 Alpha/beta hydrolase family HFD79_11630 PF01292 Prokaryotic cytochrome b561 HFD79_11635 PF00199 Catalase HFD79_11670 PF03061 Thioesterase superfamily HFD79_11675 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_11680 PF07848 PaaX-like protein HFD79_11680 PF08223 PaaX-like protein C-terminal domain HFD79_11685 PF00501 AMP-binding enzyme HFD79_11685 PF14535 AMP-binding enzyme C-terminal domain HFD79_11690 PF00108 Thiolase, N-terminal domain HFD79_11690 PF02803 Thiolase, C-terminal domain HFD79_11695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HFD79_11695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HFD79_11695 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HFD79_11700 PF00378 Enoyl-CoA hydratase/isomerase HFD79_11705 PF00378 Enoyl-CoA hydratase/isomerase HFD79_11710 PF00175 Oxidoreductase NAD-binding domain HFD79_11710 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_11710 PF00970 Oxidoreductase FAD-binding domain HFD79_11715 PF01883 Iron-sulfur cluster assembly protein HFD79_11720 PF05138 Phenylacetic acid catabolic protein HFD79_11725 PF06243 Phenylacetic acid degradation B HFD79_11730 PF05138 Phenylacetic acid catabolic protein HFD79_11735 PF01575 MaoC like domain HFD79_11735 PF00171 Aldehyde dehydrogenase family HFD79_11740 PF03315 Serine dehydratase beta chain HFD79_11740 PF03313 Serine dehydratase alpha chain HFD79_11745 PF13520 Amino acid permease HFD79_11750 PF00171 Aldehyde dehydrogenase family HFD79_11755 PF00083 Sugar (and other) transporter HFD79_11765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_11765 PF04324 BFD-like [2Fe-2S] binding domain HFD79_11775 PF01266 FAD dependent oxidoreductase HFD79_11780 PF05544 Proline racemase HFD79_11785 PF00392 Bacterial regulatory proteins, gntR family HFD79_11795 PF00701 Dihydrodipicolinate synthetase family HFD79_11805 PF00376 MerR family regulatory protein HFD79_11805 PF09278 MerR, DNA binding HFD79_11820 PF02677 Epoxyqueuosine reductase QueH HFD79_11835 PF07690 Major Facilitator Superfamily HFD79_11840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HFD79_11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_11850 PF03466 LysR substrate binding domain HFD79_11880 PF07724 AAA domain (Cdc48 subfamily) HFD79_11880 PF17871 AAA lid domain HFD79_11880 PF10431 C-terminal, D2-small domain, of ClpB protein HFD79_11880 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_11890 PF01389 OmpA-like transmembrane domain HFD79_11890 PF00691 OmpA family HFD79_11955 PF00005 ABC transporter HFD79_11960 PF00497 Bacterial extracellular solute-binding proteins, family 3 HFD79_11965 PF01425 Amidase HFD79_11970 PF08753 NikR C terminal nickel binding domain HFD79_11970 PF01402 Ribbon-helix-helix protein, copG family HFD79_11990 PF02525 Flavodoxin-like fold HFD79_11995 PF02785 Biotin carboxylase C-terminal domain HFD79_11995 PF00289 Biotin carboxylase, N-terminal domain HFD79_11995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_12010 PF13823 Alcohol dehydrogenase GroES-associated HFD79_12010 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_12010 PF00107 Zinc-binding dehydrogenase HFD79_12020 PF00440 Bacterial regulatory proteins, tetR family HFD79_12040 PF00654 Voltage gated chloride channel HFD79_12045 PF02785 Biotin carboxylase C-terminal domain HFD79_12045 PF00289 Biotin carboxylase, N-terminal domain HFD79_12045 PF00364 Biotin-requiring enzyme HFD79_12045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HFD79_12055 PF07286 Protein of unknown function (DUF1445) HFD79_12060 PF03746 LamB/YcsF family HFD79_12065 PF01566 Natural resistance-associated macrophage protein HFD79_12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_12070 PF03466 LysR substrate binding domain HFD79_12085 PF05593 RHS Repeat HFD79_12085 PF14220 Domain of unknown function (DUF4329) HFD79_12085 PF03527 RHS protein HFD79_12090 PF16671 Actin cross-linking domain HFD79_12090 PF04717 Type VI secretion system, phage-baseplate injector HFD79_12100 PF13419 Haloacid dehalogenase-like hydrolase HFD79_12120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HFD79_12120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HFD79_12140 PF07690 Major Facilitator Superfamily HFD79_12150 PF03279 Bacterial lipid A biosynthesis acyltransferase HFD79_12155 PF00990 Diguanylate cyclase, GGDEF domain HFD79_12155 PF00563 EAL domain HFD79_12155 PF03707 Bacterial signalling protein N terminal repeat HFD79_12160 PF00892 EamA-like transporter family HFD79_12165 PF01037 Lrp/AsnC ligand binding domain HFD79_12170 PF05190 MutS family domain IV HFD79_12170 PF00488 MutS domain V HFD79_12170 PF05192 MutS domain III HFD79_12170 PF05188 MutS domain II HFD79_12170 PF01624 MutS domain I HFD79_12180 PF00037 4Fe-4S binding domain HFD79_12180 PF11953 Domain of unknown function (DUF3470) HFD79_12190 PF01596 O-methyltransferase HFD79_12200 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_12205 PF01205 Uncharacterized protein family UPF0029 HFD79_12215 PF03412 Peptidase C39 family HFD79_12215 PF00664 ABC transporter transmembrane region HFD79_12215 PF00005 ABC transporter HFD79_12220 PF02321 Outer membrane efflux protein HFD79_12230 PF12399 Branched-chain amino acid ATP-binding cassette transporter HFD79_12230 PF00005 ABC transporter HFD79_12235 PF03968 OstA-like protein HFD79_12250 PF00571 CBS domain HFD79_12250 PF01380 SIS domain HFD79_12255 PF01406 tRNA synthetases class I (C) catalytic domain HFD79_12255 PF09190 DALR domain HFD79_12285 PF01638 HxlR-like helix-turn-helix HFD79_12290 PF07690 Major Facilitator Superfamily HFD79_12315 PF03807 NADP oxidoreductase coenzyme F420-dependent HFD79_12315 PF14748 Pyrroline-5-carboxylate reductase dimerisation HFD79_12325 PF00313 'Cold-shock' DNA-binding domain HFD79_12330 PF01810 LysE type translocator HFD79_12365 PF13742 OB-fold nucleic acid binding domain HFD79_12365 PF02601 Exonuclease VII, large subunit HFD79_12400 PF09278 MerR, DNA binding HFD79_12400 PF00376 MerR family regulatory protein HFD79_12405 PF00403 Heavy-metal-associated domain HFD79_12415 PF03466 LysR substrate binding domain HFD79_12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_12420 PF00355 Rieske [2Fe-2S] domain HFD79_12420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HFD79_12425 PF00866 Ring hydroxylating beta subunit HFD79_12430 PF00970 Oxidoreductase FAD-binding domain HFD79_12430 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_12430 PF00175 Oxidoreductase NAD-binding domain HFD79_12435 PF00106 short chain dehydrogenase HFD79_12440 PF03594 Benzoate membrane transport protein HFD79_12445 PF07690 Major Facilitator Superfamily HFD79_12455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HFD79_12455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HFD79_12460 PF04408 Helicase associated domain (HA2) HFD79_12460 PF11898 Domain of unknown function (DUF3418) HFD79_12460 PF00270 DEAD/DEAH box helicase HFD79_12460 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HFD79_12460 PF00271 Helicase conserved C-terminal domain HFD79_12465 PF10417 C-terminal domain of 1-Cys peroxiredoxin HFD79_12465 PF00578 AhpC/TSA family HFD79_12485 PF13192 Thioredoxin domain HFD79_12485 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_12495 PF00043 Glutathione S-transferase, C-terminal domain HFD79_12495 PF02798 Glutathione S-transferase, N-terminal domain HFD79_12505 PF02390 Putative methyltransferase HFD79_12510 PF00043 Glutathione S-transferase, C-terminal domain HFD79_12510 PF13417 Glutathione S-transferase, N-terminal domain HFD79_12520 PF00691 OmpA family HFD79_12520 PF13488 Glycine zipper HFD79_12525 PF01979 Amidohydrolase family HFD79_12530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HFD79_12530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HFD79_12540 PF01170 Putative RNA methylase family UPF0020 HFD79_12540 PF10672 S-adenosylmethionine-dependent methyltransferase HFD79_12540 PF02926 THUMP domain HFD79_12555 PF10431 C-terminal, D2-small domain, of ClpB protein HFD79_12555 PF02861 Clp amino terminal domain, pathogenicity island component HFD79_12555 PF17871 AAA lid domain HFD79_12555 PF07724 AAA domain (Cdc48 subfamily) HFD79_12555 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_12570 PF02566 OsmC-like protein HFD79_12575 PF00027 Cyclic nucleotide-binding domain HFD79_12575 PF13545 Crp-like helix-turn-helix domain HFD79_12585 PF00248 Aldo/keto reductase family HFD79_12600 PF00709 Adenylosuccinate synthetase HFD79_12605 PF13393 Histidyl-tRNA synthetase HFD79_12610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HFD79_12610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HFD79_12615 PF01411 tRNA synthetases class II (A) HFD79_12615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HFD79_12615 PF02272 DHHA1 domain HFD79_12620 PF01842 ACT domain HFD79_12620 PF13840 ACT domain HFD79_12620 PF00696 Amino acid kinase family HFD79_12625 PF02599 Global regulator protein family HFD79_12630 PF01351 Ribonuclease HII HFD79_12640 PF01292 Prokaryotic cytochrome b561 HFD79_12645 PF00962 Adenosine/AMP deaminase HFD79_12650 PF00860 Permease family HFD79_12660 PF13610 DDE domain HFD79_12665 PF00324 Amino acid permease HFD79_12670 PF04958 Arginine N-succinyltransferase beta subunit HFD79_12675 PF00202 Aminotransferase class-III HFD79_12685 PF00171 Aldehyde dehydrogenase family HFD79_12695 PF07729 FCD domain HFD79_12695 PF00392 Bacterial regulatory proteins, gntR family HFD79_12705 PF00324 Amino acid permease HFD79_12710 PF01266 FAD dependent oxidoreductase HFD79_12715 PF00324 Amino acid permease HFD79_12755 PF03527 RHS protein HFD79_12755 PF05593 RHS Repeat HFD79_12760 PF16671 Actin cross-linking domain HFD79_12760 PF04717 Type VI secretion system, phage-baseplate injector HFD79_12780 PF03180 NLPA lipoprotein HFD79_12785 PF05987 Bacterial protein of unknown function (DUF898) HFD79_12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_12800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_12805 PF00764 Arginosuccinate synthase HFD79_12810 PF00360 Phytochrome region HFD79_12810 PF00990 Diguanylate cyclase, GGDEF domain HFD79_12810 PF00563 EAL domain HFD79_12810 PF01590 GAF domain HFD79_12815 PF01979 Amidohydrolase family HFD79_12820 PF00929 Exonuclease HFD79_12830 PF00593 TonB dependent receptor HFD79_12830 PF07715 TonB-dependent Receptor Plug Domain HFD79_12835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_12840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HFD79_12840 PF00005 ABC transporter HFD79_12845 PF12911 N-terminal TM domain of oligopeptide transport permease C HFD79_12845 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_12850 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_12855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HFD79_12860 PF01476 LysM domain HFD79_12860 PF01476 LysM domain HFD79_12860 PF01464 Transglycosylase SLT domain HFD79_12860 PF01464 Transglycosylase SLT domain HFD79_12865 PF00929 Exonuclease HFD79_12875 PF09297 NADH pyrophosphatase zinc ribbon domain HFD79_12875 PF00293 NUDIX domain HFD79_12885 PF04972 BON domain HFD79_12890 PF02021 Uncharacterised protein family UPF0102 HFD79_12895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HFD79_12905 PF03466 LysR substrate binding domain HFD79_12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_12910 PF01810 LysE type translocator HFD79_12920 PF13411 MerR HTH family regulatory protein HFD79_12930 PF01494 FAD binding domain HFD79_12935 PF01494 FAD binding domain HFD79_12940 PF00557 Metallopeptidase family M24 HFD79_12940 PF05195 Aminopeptidase P, N-terminal domain HFD79_13025 PF10145 Phage-related minor tail protein HFD79_13025 PF01464 Transglycosylase SLT domain HFD79_13025 PF01551 Peptidase family M23 HFD79_13085 PF04860 Phage portal protein HFD79_13180 PF03796 DnaB-like helicase C terminal domain HFD79_13180 PF00772 DnaB-like helicase N terminal domain HFD79_13195 PF01726 LexA DNA binding domain HFD79_13195 PF00717 Peptidase S24-like HFD79_13245 PF08019 Phosphoethanolamine transferase EptA/EptB HFD79_13245 PF00884 Sulfatase HFD79_13290 PF01476 LysM domain HFD79_13290 PF08525 Opacity-associated protein A N-terminal motif HFD79_13290 PF01551 Peptidase family M23 HFD79_13615 PF01812 5-formyltetrahydrofolate cyclo-ligase family HFD79_13625 PF03895 YadA-like membrane anchor domain HFD79_13625 PF13018 Extended Signal Peptide of Type V secretion system HFD79_13625 PF05662 Coiled stalk of trimeric autotransporter adhesin HFD79_13625 PF05658 Head domain of trimeric autotransporter adhesin HFD79_13630 PF02190 ATP-dependent protease La (LON) substrate-binding domain HFD79_13630 PF05362 Lon protease (S16) C-terminal proteolytic domain HFD79_13630 PF00004 ATPase family associated with various cellular activities (AAA) HFD79_13635 PF02590 Predicted SPOUT methyltransferase HFD79_13640 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HFD79_13650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HFD79_13650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HFD79_13655 PF04060 Putative Fe-S cluster HFD79_13660 PF10576 Iron-sulfur binding domain of endonuclease III HFD79_13660 PF00633 Helix-hairpin-helix motif HFD79_13660 PF00730 HhH-GPD superfamily base excision DNA repair protein HFD79_13670 PF05191 Adenylate kinase, active site lid HFD79_13685 PF03717 Penicillin-binding Protein dimerisation domain HFD79_13685 PF00905 Penicillin binding protein transpeptidase domain HFD79_13700 PF02492 CobW/HypB/UreG, nucleotide-binding domain HFD79_13705 PF01730 UreF HFD79_13710 PF02814 UreE urease accessory protein, N-terminal domain HFD79_13710 PF05194 UreE urease accessory protein, C-terminal domain HFD79_13715 PF01979 Amidohydrolase family HFD79_13715 PF00449 Urease alpha-subunit, N-terminal domain HFD79_13720 PF00699 Urease beta subunit HFD79_13725 PF00547 Urease, gamma subunit HFD79_13730 PF01774 UreD urease accessory protein HFD79_13745 PF00463 Isocitrate lyase family HFD79_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_13750 PF03466 LysR substrate binding domain HFD79_13755 PF03471 Transporter associated domain HFD79_13755 PF00571 CBS domain HFD79_13755 PF01595 Cyclin M transmembrane N-terminal domain HFD79_13760 PF03600 Citrate transporter HFD79_13775 PF00009 Elongation factor Tu GTP binding domain HFD79_13780 PF01507 Phosphoadenosine phosphosulfate reductase family HFD79_13790 PF14052 Capsule assembly protein Wzi HFD79_13795 PF01336 OB-fold nucleic acid binding domain HFD79_13795 PF00152 tRNA synthetases class II (D, K and N) HFD79_13810 PF00301 Rubredoxin HFD79_13815 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_13815 PF18113 Rubredoxin binding C-terminal domain HFD79_13820 PF00561 alpha/beta hydrolase fold HFD79_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_13825 PF03466 LysR substrate binding domain HFD79_13835 PF13089 Polyphosphate kinase N-terminal domain HFD79_13835 PF17941 Polyphosphate kinase C-terminal domain 1 HFD79_13835 PF13090 Polyphosphate kinase C-terminal domain 2 HFD79_13835 PF02503 Polyphosphate kinase middle domain HFD79_13840 PF00912 Transglycosylase HFD79_13845 PF01694 Rhomboid family HFD79_13855 PF00005 ABC transporter HFD79_13860 PF13472 GDSL-like Lipase/Acylhydrolase family HFD79_13865 PF00484 Carbonic anhydrase HFD79_13870 PF00561 alpha/beta hydrolase fold HFD79_13880 PF00593 TonB dependent receptor HFD79_13880 PF07715 TonB-dependent Receptor Plug Domain HFD79_13885 PF01106 NifU-like domain HFD79_13885 PF01521 Iron-sulphur cluster biosynthesis HFD79_13895 PF00884 Sulfatase HFD79_13900 PF03781 Sulfatase-modifying factor enzyme 1 HFD79_13915 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_13920 PF01384 Phosphate transporter family HFD79_13925 PF02574 Homocysteine S-methyltransferase HFD79_13925 PF02965 Vitamin B12 dependent methionine synthase, activation domain HFD79_13925 PF02310 B12 binding domain HFD79_13925 PF00809 Pterin binding enzyme HFD79_13925 PF02607 B12 binding domain HFD79_13930 PF02779 Transketolase, pyrimidine binding domain HFD79_13930 PF02780 Transketolase, C-terminal domain HFD79_13935 PF00456 Transketolase, thiamine diphosphate binding domain HFD79_13940 PF07690 Major Facilitator Superfamily HFD79_13950 PF03466 LysR substrate binding domain HFD79_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_13960 PF01263 Aldose 1-epimerase HFD79_13965 PF07690 Major Facilitator Superfamily HFD79_13970 PF12833 Helix-turn-helix domain HFD79_13970 PF02311 AraC-like ligand binding domain HFD79_13975 PF04960 Glutaminase HFD79_13980 PF01327 Polypeptide deformylase HFD79_13985 PF07690 Major Facilitator Superfamily HFD79_13995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HFD79_13995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HFD79_13995 PF00205 Thiamine pyrophosphate enzyme, central domain HFD79_14000 PF00171 Aldehyde dehydrogenase family HFD79_14005 PF03447 Homoserine dehydrogenase, NAD binding domain HFD79_14005 PF01958 Domain of unknown function DUF108 HFD79_14015 PF12697 Alpha/beta hydrolase family HFD79_14025 PF07690 Major Facilitator Superfamily HFD79_14030 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_14030 PF14759 Reductase C-terminal HFD79_14035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HFD79_14045 PF00355 Rieske [2Fe-2S] domain HFD79_14055 PF00355 Rieske [2Fe-2S] domain HFD79_14060 PF09339 IclR helix-turn-helix domain HFD79_14060 PF01614 Bacterial transcriptional regulator HFD79_14075 PF00378 Enoyl-CoA hydratase/isomerase HFD79_14085 PF00535 Glycosyl transferase family 2 HFD79_14090 PF01522 Polysaccharide deacetylase HFD79_14090 PF14883 Hypothetical glycosyl hydrolase family 13 HFD79_14095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_14100 PF07152 YaeQ protein HFD79_14105 PF00375 Sodium:dicarboxylate symporter family HFD79_14110 PF02492 CobW/HypB/UreG, nucleotide-binding domain HFD79_14110 PF07683 Cobalamin synthesis protein cobW C-terminal domain HFD79_14120 PF03061 Thioesterase superfamily HFD79_14130 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_14135 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_14140 PF13977 BetI-type transcriptional repressor, C-terminal HFD79_14140 PF00440 Bacterial regulatory proteins, tetR family HFD79_14145 PF00171 Aldehyde dehydrogenase family HFD79_14150 PF00732 GMC oxidoreductase HFD79_14150 PF05199 GMC oxidoreductase HFD79_14155 PF06039 Malate:quinone oxidoreductase (Mqo) HFD79_14165 PF02574 Homocysteine S-methyltransferase HFD79_14170 PF13520 Amino acid permease HFD79_14195 PF00701 Dihydrodipicolinate synthetase family HFD79_14200 PF00083 Sugar (and other) transporter HFD79_14245 PF00717 Peptidase S24-like HFD79_14250 PF13438 Domain of unknown function (DUF4113) HFD79_14250 PF00817 impB/mucB/samB family HFD79_14250 PF11799 impB/mucB/samB family C-terminal domain HFD79_14250 PF11798 IMS family HHH motif HFD79_14335 PF02768 DNA polymerase III beta subunit, C-terminal domain HFD79_14335 PF02767 DNA polymerase III beta subunit, central domain HFD79_14335 PF00712 DNA polymerase III beta subunit, N-terminal domain HFD79_14375 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HFD79_14570 PF01695 IstB-like ATP binding protein HFD79_14580 PF01555 DNA methylase HFD79_14715 PF07690 Major Facilitator Superfamily HFD79_14720 PF13533 Biotin-lipoyl like HFD79_14725 PF03061 Thioesterase superfamily HFD79_14730 PF00490 Delta-aminolevulinic acid dehydratase HFD79_14735 PF01266 FAD dependent oxidoreductase HFD79_14740 PF01370 NAD dependent epimerase/dehydratase family HFD79_14740 PF08338 Domain of unknown function (DUF1731) HFD79_14760 PF00149 Calcineurin-like phosphoesterase HFD79_14760 PF12320 Type 5 capsule protein repressor C-terminal domain HFD79_14770 PF01168 Alanine racemase, N-terminal domain HFD79_14775 PF00437 Type II/IV secretion system protein HFD79_14780 PF00437 Type II/IV secretion system protein HFD79_14785 PF01475 Ferric uptake regulator family HFD79_14790 PF04355 SmpA / OmlA family HFD79_14795 PF03658 RnfH family Ubiquitin HFD79_14805 PF01814 Hemerythrin HHE cation binding domain HFD79_14810 PF13230 Glutamine amidotransferases class-II HFD79_14820 PF00696 Amino acid kinase family HFD79_14825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HFD79_14825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HFD79_14825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HFD79_14825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HFD79_14830 PF00692 dUTPase HFD79_14835 PF13361 UvrD-like helicase C-terminal domain HFD79_14835 PF00580 UvrD/REP helicase N-terminal domain HFD79_14840 PF00691 OmpA family HFD79_14840 PF13488 Glycine zipper HFD79_14845 PF01553 Acyltransferase HFD79_14855 PF03775 Septum formation inhibitor MinC, C-terminal domain HFD79_14860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HFD79_14865 PF03776 Septum formation topological specificity factor MinE HFD79_14880 PF01810 LysE type translocator HFD79_14885 PF17854 FtsK alpha domain HFD79_14885 PF09397 Ftsk gamma domain HFD79_14885 PF01580 FtsK/SpoIIIE family HFD79_14885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HFD79_14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase HFD79_14895 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HFD79_14900 PF04377 Arginine-tRNA-protein transferase, C terminus HFD79_14900 PF04376 Arginine-tRNA-protein transferase, N terminus HFD79_14905 PF00583 Acetyltransferase (GNAT) family HFD79_14920 PF00009 Elongation factor Tu GTP binding domain HFD79_14920 PF03143 Elongation factor Tu C-terminal domain HFD79_14920 PF03144 Elongation factor Tu domain 2 HFD79_14925 PF03764 Elongation factor G, domain IV HFD79_14925 PF00009 Elongation factor Tu GTP binding domain HFD79_14925 PF03144 Elongation factor Tu domain 2 HFD79_14925 PF00679 Elongation factor G C-terminus HFD79_14925 PF14492 Elongation Factor G, domain II HFD79_14930 PF00177 Ribosomal protein S7p/S5e HFD79_14935 PF00164 Ribosomal protein S12/S23 HFD79_14945 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_14945 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_14955 PF05726 Pirin C-terminal cupin domain HFD79_14955 PF02678 Pirin HFD79_14965 PF02540 NAD synthase HFD79_14965 PF00795 Carbon-nitrogen hydrolase HFD79_14980 PF00175 Oxidoreductase NAD-binding domain HFD79_14980 PF00111 2Fe-2S iron-sulfur cluster binding domain HFD79_14980 PF00970 Oxidoreductase FAD-binding domain HFD79_14985 PF00171 Aldehyde dehydrogenase family HFD79_14990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HFD79_14990 PF00355 Rieske [2Fe-2S] domain HFD79_14995 PF07859 alpha/beta hydrolase fold HFD79_15000 PF02028 BCCT, betaine/carnitine/choline family transporter HFD79_15005 PF00180 Isocitrate/isopropylmalate dehydrogenase HFD79_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15010 PF03466 LysR substrate binding domain HFD79_15030 PF00037 4Fe-4S binding domain HFD79_15035 PF01467 Cytidylyltransferase-like HFD79_15040 PF01668 SmpB protein HFD79_15045 PF03358 NADPH-dependent FMN reductase HFD79_15055 PF01479 S4 domain HFD79_15055 PF00849 RNA pseudouridylate synthase HFD79_15060 PF13525 Outer membrane lipoprotein HFD79_15065 PF01807 CHC2 zinc finger HFD79_15065 PF08275 DNA primase catalytic core, N-terminal domain HFD79_15065 PF08278 DNA primase DnaG DnaB-binding HFD79_15065 PF10410 DnaB-helicase binding domain of primase HFD79_15070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HFD79_15070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HFD79_15070 PF01488 Shikimate / quinate 5-dehydrogenase HFD79_15080 PF03550 Outer membrane lipoprotein LolB HFD79_15085 PF00288 GHMP kinases N terminal domain HFD79_15085 PF08544 GHMP kinases C terminal HFD79_15110 PF14572 Phosphoribosyl synthetase-associated domain HFD79_15110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HFD79_15115 PF01386 Ribosomal L25p family HFD79_15120 PF01195 Peptidyl-tRNA hydrolase HFD79_15125 PF02261 Aspartate decarboxylase HFD79_15140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HFD79_15150 PF02581 Thiamine monophosphate synthase HFD79_15150 PF03070 TENA/THI-4/PQQC family HFD79_15150 PF08543 Phosphomethylpyrimidine kinase HFD79_15160 PF04972 BON domain HFD79_15160 PF01476 LysM domain HFD79_15165 PF00550 Phosphopantetheine attachment site HFD79_15175 PF00698 Acyl transferase domain HFD79_15180 PF01783 Ribosomal L32p protein family HFD79_15185 PF02620 Large ribosomal RNA subunit accumulation protein YceD HFD79_15190 PF04315 Elongation factor P hydroxylase HFD79_15195 PF01300 Telomere recombination HFD79_15200 PF02616 Segregation and condensation protein ScpA HFD79_15205 PF04079 Segregation and condensation complex subunit ScpB HFD79_15210 PF00849 RNA pseudouridylate synthase HFD79_15210 PF01479 S4 domain HFD79_15225 PF00155 Aminotransferase class I and II HFD79_15230 PF04055 Radical SAM superfamily HFD79_15230 PF06968 Biotin and Thiamin Synthesis associated domain HFD79_15230 PF00202 Aminotransferase class-III HFD79_15235 PF08241 Methyltransferase domain HFD79_15235 PF12697 Alpha/beta hydrolase family HFD79_15240 PF02358 Trehalose-phosphatase HFD79_15245 PF00982 Glycosyltransferase family 20 HFD79_15250 PF07690 Major Facilitator Superfamily HFD79_15255 PF00210 Ferritin-like domain HFD79_15260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HFD79_15260 PF12826 Helix-hairpin-helix motif HFD79_15260 PF03120 NAD-dependent DNA ligase OB-fold domain HFD79_15260 PF01653 NAD-dependent DNA ligase adenylation domain HFD79_15260 PF00533 BRCA1 C Terminus (BRCT) domain HFD79_15270 PF02463 RecF/RecN/SMC N terminal domain HFD79_15270 PF06470 SMC proteins Flexible Hinge Domain HFD79_15280 PF01925 Sulfite exporter TauE/SafE HFD79_15290 PF03309 Type III pantothenate kinase HFD79_15295 PF00448 SRP54-type protein, GTPase domain HFD79_15295 PF02881 SRP54-type protein, helical bundle domain HFD79_15295 PF02978 Signal peptide binding domain HFD79_15305 PF01207 Dihydrouridine synthase (Dus) HFD79_15335 PF00692 dUTPase HFD79_15350 PF01048 Phosphorylase superfamily HFD79_15355 PF10609 NUBPL iron-transfer P-loop NTPase HFD79_15365 PF01588 Putative tRNA binding domain HFD79_15365 PF09334 tRNA synthetases class I (M) HFD79_15390 PF13533 Biotin-lipoyl like HFD79_15395 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_15410 PF05552 Conserved TM helix HFD79_15425 PF00970 Oxidoreductase FAD-binding domain HFD79_15425 PF00175 Oxidoreductase NAD-binding domain HFD79_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15430 PF03466 LysR substrate binding domain HFD79_15435 PF00313 'Cold-shock' DNA-binding domain HFD79_15445 PF00361 Proton-conducting membrane transporter HFD79_15450 PF00361 Proton-conducting membrane transporter HFD79_15455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HFD79_15455 PF00361 Proton-conducting membrane transporter HFD79_15460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HFD79_15465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HFD79_15470 PF12838 4Fe-4S dicluster domain HFD79_15475 PF00146 NADH dehydrogenase HFD79_15480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HFD79_15480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HFD79_15480 PF00384 Molybdopterin oxidoreductase HFD79_15485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HFD79_15485 PF10531 SLBB domain HFD79_15485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HFD79_15495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HFD79_15495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HFD79_15500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HFD79_15505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HFD79_15510 PF00990 Diguanylate cyclase, GGDEF domain HFD79_15510 PF17151 Periplasmic sensor domain HFD79_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_15520 PF00672 HAMP domain HFD79_15520 PF00512 His Kinase A (phospho-acceptor) domain HFD79_15525 PF00486 Transcriptional regulatory protein, C terminal HFD79_15525 PF00072 Response regulator receiver domain HFD79_15535 PF03477 ATP cone domain HFD79_15535 PF00317 Ribonucleotide reductase, all-alpha domain HFD79_15535 PF02867 Ribonucleotide reductase, barrel domain HFD79_15545 PF00268 Ribonucleotide reductase, small chain HFD79_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_15555 PF00512 His Kinase A (phospho-acceptor) domain HFD79_15555 PF00672 HAMP domain HFD79_15555 PF13755 Sensor N-terminal transmembrane domain HFD79_15555 PF13756 Stimulus-sensing domain HFD79_15625 PF01011 PQQ enzyme repeat HFD79_15625 PF13360 PQQ-like domain HFD79_15645 PF02567 Phenazine biosynthesis-like protein HFD79_15665 PF01613 Flavin reductase like domain HFD79_15670 PF08267 Cobalamin-independent synthase, N-terminal domain HFD79_15670 PF01717 Cobalamin-independent synthase, Catalytic domain HFD79_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15680 PF03466 LysR substrate binding domain HFD79_15685 PF01810 LysE type translocator HFD79_15695 PF12833 Helix-turn-helix domain HFD79_15695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HFD79_15700 PF07687 Peptidase dimerisation domain HFD79_15700 PF01546 Peptidase family M20/M25/M40 HFD79_15710 PF03466 LysR substrate binding domain HFD79_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15715 PF07690 Major Facilitator Superfamily HFD79_15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15725 PF03466 LysR substrate binding domain HFD79_15730 PF00890 FAD binding domain HFD79_15730 PF14537 Cytochrome c3 HFD79_15740 PF02515 CoA-transferase family III HFD79_15745 PF07690 Major Facilitator Superfamily HFD79_15750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_15750 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_15750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_15755 PF03466 LysR substrate binding domain HFD79_15760 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_15760 PF00107 Zinc-binding dehydrogenase HFD79_15765 PF00962 Adenosine/AMP deaminase HFD79_15790 PF02445 Quinolinate synthetase A protein HFD79_15795 PF01960 ArgJ family HFD79_15800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HFD79_15800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HFD79_15805 PF00893 Small Multidrug Resistance protein HFD79_15815 PF05275 Copper resistance protein B precursor (CopB) HFD79_15820 PF07732 Multicopper oxidase HFD79_15820 PF07731 Multicopper oxidase HFD79_15820 PF00394 Multicopper oxidase HFD79_15835 PF00834 Ribulose-phosphate 3 epimerase family HFD79_15845 PF00756 Putative esterase HFD79_15855 PF04445 Putative SAM-dependent methyltransferase HFD79_15860 PF00814 Glycoprotease family HFD79_15865 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_15870 PF00293 NUDIX domain HFD79_15910 PF04715 Anthranilate synthase component I, N terminal region HFD79_15910 PF00425 chorismate binding enzyme HFD79_15915 PF00155 Aminotransferase class I and II HFD79_15920 PF00815 Histidinol dehydrogenase HFD79_15925 PF01634 ATP phosphoribosyltransferase HFD79_15930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HFD79_15935 PF01722 BolA-like protein HFD79_15940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HFD79_15945 PF04963 Sigma-54 factor, core binding domain HFD79_15945 PF00309 Sigma-54 factor, Activator interacting domain (AID) HFD79_15945 PF04552 Sigma-54, DNA binding domain HFD79_15990 PF00795 Carbon-nitrogen hydrolase HFD79_16000 PF01047 MarR family HFD79_16005 PF02566 OsmC-like protein HFD79_16010 PF00437 Type II/IV secretion system protein HFD79_16030 PF01612 3'-5' exonuclease HFD79_16030 PF01367 5'-3' exonuclease, C-terminal SAM fold HFD79_16030 PF00476 DNA polymerase family A HFD79_16030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HFD79_16035 PF02325 YGGT family HFD79_16040 PF03807 NADP oxidoreductase coenzyme F420-dependent HFD79_16040 PF14748 Pyrroline-5-carboxylate reductase dimerisation HFD79_16045 PF01171 PP-loop family HFD79_16045 PF11734 TilS substrate C-terminal domain HFD79_16045 PF09179 TilS substrate binding domain HFD79_16050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HFD79_16055 PF02541 Ppx/GppA phosphatase family HFD79_16060 PF00085 Thioredoxin HFD79_16065 PF07497 Rho termination factor, RNA-binding domain HFD79_16065 PF07498 Rho termination factor, N-terminal domain HFD79_16065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HFD79_16080 PF00216 Bacterial DNA-binding protein HFD79_16085 PF01588 Putative tRNA binding domain HFD79_16085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HFD79_16085 PF03484 tRNA synthetase B5 domain HFD79_16085 PF03483 B3/4 domain HFD79_16085 PF03147 Ferredoxin-fold anticodon binding domain HFD79_16090 PF01409 tRNA synthetases class II core domain (F) HFD79_16090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HFD79_16110 PF00453 Ribosomal protein L20 HFD79_16115 PF01632 Ribosomal protein L35 HFD79_16120 PF07690 Major Facilitator Superfamily HFD79_16125 PF09335 SNARE associated Golgi protein HFD79_16130 PF00043 Glutathione S-transferase, C-terminal domain HFD79_16130 PF02798 Glutathione S-transferase, N-terminal domain HFD79_16135 PF05198 Translation initiation factor IF-3, N-terminal domain HFD79_16135 PF00707 Translation initiation factor IF-3, C-terminal domain HFD79_16140 PF03129 Anticodon binding domain HFD79_16140 PF02824 TGS domain HFD79_16140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HFD79_16140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HFD79_16145 PF13193 AMP-binding enzyme C-terminal domain HFD79_16145 PF00501 AMP-binding enzyme HFD79_16150 PF04751 Protein of unknown function (DUF615) HFD79_16155 PF00381 PTS HPr component phosphorylation site HFD79_16160 PF03668 P-loop ATPase protein family HFD79_16165 PF02569 Pantoate-beta-alanine ligase HFD79_16170 PF02548 Ketopantoate hydroxymethyltransferase HFD79_16175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HFD79_16180 PF12627 Probable RNA and SrmB- binding site of polymerase A HFD79_16180 PF01743 Poly A polymerase head domain HFD79_16180 PF12626 Polymerase A arginine-rich C-terminus HFD79_16190 PF03819 MazG nucleotide pyrophosphohydrolase domain HFD79_16200 PF02824 TGS domain HFD79_16200 PF13291 ACT domain HFD79_16200 PF04607 Region found in RelA / SpoT proteins HFD79_16205 PF05958 tRNA (Uracil-5-)-methyltransferase HFD79_16215 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_16220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HFD79_16220 PF00672 HAMP domain HFD79_16220 PF00512 His Kinase A (phospho-acceptor) domain HFD79_16220 PF00072 Response regulator receiver domain HFD79_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_16220 PF01627 Hpt domain HFD79_16225 PF00378 Enoyl-CoA hydratase/isomerase HFD79_16230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HFD79_16230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HFD79_16235 PF01261 Xylose isomerase-like TIM barrel HFD79_16245 PF00106 short chain dehydrogenase HFD79_16250 PF02233 NAD(P) transhydrogenase beta subunit HFD79_16255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HFD79_16260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HFD79_16260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HFD79_16265 PF00892 EamA-like transporter family HFD79_16275 PF07690 Major Facilitator Superfamily HFD79_16280 PF01207 Dihydrouridine synthase (Dus) HFD79_16290 PF03466 LysR substrate binding domain HFD79_16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_16300 PF00899 ThiF family HFD79_16310 PF00330 Aconitase family (aconitate hydratase) HFD79_16310 PF00694 Aconitase C-terminal domain HFD79_16315 PF01026 TatD related DNase HFD79_16330 PF16658 Class II release factor RF3, C-terminal domain HFD79_16330 PF00009 Elongation factor Tu GTP binding domain HFD79_16330 PF03144 Elongation factor Tu domain 2 HFD79_16350 PF00563 EAL domain HFD79_16350 PF00990 Diguanylate cyclase, GGDEF domain HFD79_16350 PF03707 Bacterial signalling protein N terminal repeat HFD79_16355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HFD79_16355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HFD79_16360 PF10369 Small subunit of acetolactate synthase HFD79_16365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HFD79_16365 PF00205 Thiamine pyrophosphate enzyme, central domain HFD79_16365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HFD79_16375 PF08264 Anticodon-binding domain of tRNA HFD79_16375 PF00133 tRNA synthetases class I (I, L, M and V) HFD79_16375 PF13603 Leucyl-tRNA synthetase, Domain 2 HFD79_16375 PF09334 tRNA synthetases class I (M) HFD79_16390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HFD79_16395 PF12704 MacB-like periplasmic core domain HFD79_16395 PF02687 FtsX-like permease family HFD79_16395 PF00005 ABC transporter HFD79_16400 PF02321 Outer membrane efflux protein HFD79_16415 PF00929 Exonuclease HFD79_16420 PF03193 RsgA GTPase HFD79_16430 PF00462 Glutaredoxin HFD79_16435 PF02556 Preprotein translocase subunit SecB HFD79_16450 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_16450 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_16465 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_16465 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_16475 PF04820 Tryptophan halogenase HFD79_16495 PF00221 Aromatic amino acid lyase HFD79_16510 PF13193 AMP-binding enzyme C-terminal domain HFD79_16510 PF00501 AMP-binding enzyme HFD79_16520 PF00550 Phosphopantetheine attachment site HFD79_16525 PF00550 Phosphopantetheine attachment site HFD79_16540 PF01926 50S ribosome-binding GTPase HFD79_16540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HFD79_16545 PF13360 PQQ-like domain HFD79_16555 PF13393 Histidyl-tRNA synthetase HFD79_16555 PF03129 Anticodon binding domain HFD79_16560 PF04551 GcpE protein HFD79_16565 PF13464 Domain of unknown function (DUF4115) HFD79_16575 PF04055 Radical SAM superfamily HFD79_16580 PF00334 Nucleoside diphosphate kinase HFD79_16585 PF04384 Iron-sulphur cluster assembly HFD79_16590 PF01569 PAP2 superfamily HFD79_16595 PF00534 Glycosyl transferases group 1 HFD79_16595 PF13439 Glycosyltransferase Family 4 HFD79_16600 PF17804 Tail specific protease N-terminal domain HFD79_16600 PF03572 Peptidase family S41 HFD79_16600 PF00595 PDZ domain HFD79_16600 PF11818 C-terminal domain of tail specific protease (DUF3340) HFD79_16605 PF00933 Glycosyl hydrolase family 3 N terminal domain HFD79_16615 PF00561 alpha/beta hydrolase fold HFD79_16620 PF00171 Aldehyde dehydrogenase family HFD79_16625 PF00171 Aldehyde dehydrogenase family HFD79_16630 PF01202 Shikimate kinase HFD79_16635 PF02447 GntP family permease HFD79_16640 PF01081 KDPG and KHG aldolase HFD79_16645 PF00920 Dehydratase family HFD79_16650 PF00871 Acetokinase family HFD79_16655 PF01515 Phosphate acetyl/butaryl transferase HFD79_16655 PF07085 DRTGG domain HFD79_16660 PF05681 Fumarate hydratase (Fumerase) HFD79_16660 PF05683 Fumarase C-terminus HFD79_16675 PF06689 ClpX C4-type zinc finger HFD79_16675 PF07724 AAA domain (Cdc48 subfamily) HFD79_16675 PF10431 C-terminal, D2-small domain, of ClpB protein HFD79_16680 PF00574 Clp protease HFD79_16685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_16685 PF05697 Bacterial trigger factor protein (TF) HFD79_16685 PF05698 Bacterial trigger factor protein (TF) C-terminus HFD79_16690 PF07715 TonB-dependent Receptor Plug Domain HFD79_16690 PF00593 TonB dependent receptor HFD79_16695 PF18331 PKHD-type hydroxylase C-terminal domain HFD79_16695 PF13640 2OG-Fe(II) oxygenase superfamily HFD79_16700 PF00682 HMGL-like HFD79_16700 PF08502 LeuA allosteric (dimerisation) domain HFD79_16705 PF00561 alpha/beta hydrolase fold HFD79_16710 PF00561 alpha/beta hydrolase fold HFD79_16710 PF07021 Methionine biosynthesis protein MetW HFD79_16720 PF01725 Ham1 family HFD79_16730 PF02416 mttA/Hcf106 family HFD79_16735 PF02416 mttA/Hcf106 family HFD79_16740 PF00902 Sec-independent protein translocase protein (TatC) HFD79_16760 PF01790 Prolipoprotein diacylglyceryl transferase HFD79_16775 PF00303 Thymidylate synthase HFD79_16780 PF00186 Dihydrofolate reductase HFD79_16790 PF01625 Peptide methionine sulfoxide reductase HFD79_16800 PF01618 MotA/TolQ/ExbB proton channel family HFD79_16810 PF01842 ACT domain HFD79_16810 PF00551 Formyl transferase HFD79_16820 PF00171 Aldehyde dehydrogenase family HFD79_16825 PF00830 Ribosomal L28 family HFD79_16830 PF00471 Ribosomal protein L33 HFD79_16835 PF00999 Sodium/hydrogen exchanger family HFD79_16835 PF02254 TrkA-N domain HFD79_16855 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HFD79_16860 PF13361 UvrD-like helicase C-terminal domain HFD79_16860 PF00580 UvrD/REP helicase N-terminal domain HFD79_16875 PF08272 Topoisomerase I zinc-ribbon-like HFD79_16875 PF01131 DNA topoisomerase HFD79_16875 PF01751 Toprim domain HFD79_16875 PF01396 Topoisomerase DNA binding C4 zinc finger HFD79_16885 PF01638 HxlR-like helix-turn-helix HFD79_16890 PF00107 Zinc-binding dehydrogenase HFD79_16890 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_16895 PF04102 SlyX HFD79_16905 PF01810 LysE type translocator HFD79_16910 PF03279 Bacterial lipid A biosynthesis acyltransferase HFD79_16920 PF00375 Sodium:dicarboxylate symporter family HFD79_16930 PF02774 Semialdehyde dehydrogenase, dimerisation domain HFD79_16930 PF01118 Semialdehyde dehydrogenase, NAD binding domain HFD79_16950 PF01416 tRNA pseudouridine synthase HFD79_16960 PF01176 Translation initiation factor 1A / IF-1 HFD79_16975 PF00180 Isocitrate/isopropylmalate dehydrogenase HFD79_16985 PF00694 Aconitase C-terminal domain HFD79_16990 PF00330 Aconitase family (aconitate hydratase) HFD79_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_17000 PF03466 LysR substrate binding domain HFD79_17020 PF00293 NUDIX domain HFD79_17025 PF01590 GAF domain HFD79_17025 PF05524 PEP-utilising enzyme, N-terminal HFD79_17025 PF00391 PEP-utilising enzyme, mobile domain HFD79_17025 PF02896 PEP-utilising enzyme, TIM barrel domain HFD79_17030 PF00141 Peroxidase HFD79_17035 PF12706 Beta-lactamase superfamily domain HFD79_17040 PF03466 LysR substrate binding domain HFD79_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_17050 PF02798 Glutathione S-transferase, N-terminal domain HFD79_17055 PF13280 WYL domain HFD79_17055 PF08279 HTH domain HFD79_17060 PF13419 Haloacid dehalogenase-like hydrolase HFD79_17065 PF01479 S4 domain HFD79_17065 PF00849 RNA pseudouridylate synthase HFD79_17075 PF10150 Ribonuclease E/G family HFD79_17075 PF00575 S1 RNA binding domain HFD79_17075 PF12111 Polyribonucleotide phosphorylase C terminal HFD79_17080 PF00501 AMP-binding enzyme HFD79_17080 PF13193 AMP-binding enzyme C-terminal domain HFD79_17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HFD79_17095 PF03466 LysR substrate binding domain HFD79_17100 PF00106 short chain dehydrogenase HFD79_17105 PF04055 Radical SAM superfamily HFD79_17105 PF06969 HemN C-terminal domain HFD79_17115 PF01554 MatE HFD79_17120 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_17120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_17120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HFD79_17125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_17125 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HFD79_17130 PF03109 ABC1 family HFD79_17135 PF01197 Ribosomal protein L31 HFD79_17150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HFD79_17170 PF03884 DNA gyrase inhibitor YacG HFD79_17175 PF00753 Metallo-beta-lactamase superfamily HFD79_17180 PF00762 Ferrochelatase HFD79_17190 PF01177 Asp/Glu/Hydantoin racemase HFD79_17205 PF01206 Sulfurtransferase TusA HFD79_17210 PF00571 CBS domain HFD79_17210 PF03471 Transporter associated domain HFD79_17215 PF00795 Carbon-nitrogen hydrolase HFD79_17220 PF01588 Putative tRNA binding domain HFD79_17230 PF08334 Type II secretion system (T2SS), protein G HFD79_17230 PF07963 Prokaryotic N-terminal methylation motif HFD79_17235 PF00482 Type II secretion system (T2SS), protein F HFD79_17240 PF18074 Primosomal protein N C-terminal domain HFD79_17240 PF17764 3′ DNA-binding domain (3′BD) HFD79_17240 PF00271 Helicase conserved C-terminal domain HFD79_17240 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HFD79_17240 PF00270 DEAD/DEAH box helicase HFD79_17245 PF00999 Sodium/hydrogen exchanger family HFD79_17245 PF02254 TrkA-N domain HFD79_17250 PF01430 Hsp33 protein HFD79_17260 PF00226 DnaJ domain HFD79_17260 PF01556 DnaJ C terminal domain HFD79_17270 PF01544 CorA-like Mg2+ transporter protein HFD79_17275 PF00013 KH domain HFD79_17275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HFD79_17275 PF03725 3' exoribonuclease family, domain 2 HFD79_17275 PF00575 S1 RNA binding domain HFD79_17275 PF01138 3' exoribonuclease family, domain 1 HFD79_17280 PF00312 Ribosomal protein S15 HFD79_17290 PF13538 UvrD-like helicase C-terminal domain HFD79_17295 PF12705 PD-(D/E)XK nuclease superfamily HFD79_17295 PF13361 UvrD-like helicase C-terminal domain HFD79_17295 PF00580 UvrD/REP helicase N-terminal domain HFD79_17300 PF17946 RecC C-terminal domain HFD79_17310 PF03976 Polyphosphate kinase 2 (PPK2) HFD79_17320 PF01209 ubiE/COQ5 methyltransferase family HFD79_17330 PF03109 ABC1 family HFD79_17335 PF01494 FAD binding domain HFD79_17340 PF01502 Phosphoribosyl-AMP cyclohydrolase HFD79_17355 PF00361 Proton-conducting membrane transporter HFD79_17355 PF13244 Domain of unknown function (DUF4040) HFD79_17355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HFD79_17355 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HFD79_17360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HFD79_17365 PF00361 Proton-conducting membrane transporter HFD79_17375 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HFD79_17385 PF02033 Ribosome-binding factor A HFD79_17390 PF11987 Translation-initiation factor 2 HFD79_17390 PF08364 Bacterial translation initiation factor IF-2 associated region HFD79_17390 PF00009 Elongation factor Tu GTP binding domain HFD79_17390 PF04760 Translation initiation factor IF-2, N-terminal region HFD79_17395 PF13184 NusA-like KH domain HFD79_17395 PF08529 NusA N-terminal domain HFD79_17395 PF00575 S1 RNA binding domain HFD79_17400 PF17384 RimP C-terminal SH3 domain HFD79_17400 PF02576 RimP N-terminal domain HFD79_17420 PF03840 Preprotein translocase SecG subunit HFD79_17425 PF00121 Triosephosphate isomerase HFD79_17430 PF00437 Type II/IV secretion system protein HFD79_17430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HFD79_17435 PF00482 Type II secretion system (T2SS), protein F HFD79_17440 PF01478 Type IV leader peptidase family HFD79_17440 PF06750 Bacterial Peptidase A24 N-terminal domain HFD79_17445 PF01121 Dephospho-CoA kinase HFD79_17455 PF00588 SpoU rRNA Methylase family HFD79_17455 PF08032 RNA 2'-O ribose methyltransferase substrate binding HFD79_17460 PF06865 Pyrimidine/purine nucleoside phosphorylase HFD79_17470 PF02463 RecF/RecN/SMC N terminal domain HFD79_17475 PF02622 Uncharacterized ACR, COG1678 HFD79_17480 PF03652 Holliday junction resolvase HFD79_17485 PF13533 Biotin-lipoyl like HFD79_17510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HFD79_17510 PF02805 Metal binding domain of Ada HFD79_17510 PF12833 Helix-turn-helix domain HFD79_17510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HFD79_17515 PF01066 CDP-alcohol phosphatidyltransferase HFD79_17525 PF01541 GIY-YIG catalytic domain HFD79_17525 PF02151 UvrB/uvrC motif HFD79_17525 PF08459 UvrC Helix-hairpin-helix N-terminal HFD79_17545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HFD79_17545 PF00378 Enoyl-CoA hydratase/isomerase HFD79_17545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HFD79_17550 PF02803 Thiolase, C-terminal domain HFD79_17550 PF00108 Thiolase, N-terminal domain HFD79_17570 PF09278 MerR, DNA binding HFD79_17570 PF00376 MerR family regulatory protein HFD79_17580 PF01323 DSBA-like thioredoxin domain HFD79_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_17595 PF00183 Hsp90 protein HFD79_17610 PF13726 Na+-H+ antiporter family HFD79_17610 PF03553 Na+/H+ antiporter family HFD79_17615 PF00561 alpha/beta hydrolase fold HFD79_17635 PF04997 RNA polymerase Rpb1, domain 1 HFD79_17635 PF00623 RNA polymerase Rpb1, domain 2 HFD79_17635 PF04983 RNA polymerase Rpb1, domain 3 HFD79_17635 PF04998 RNA polymerase Rpb1, domain 5 HFD79_17635 PF05000 RNA polymerase Rpb1, domain 4 HFD79_17640 PF04560 RNA polymerase Rpb2, domain 7 HFD79_17640 PF04563 RNA polymerase beta subunit HFD79_17640 PF00562 RNA polymerase Rpb2, domain 6 HFD79_17640 PF10385 RNA polymerase beta subunit external 1 domain HFD79_17640 PF04565 RNA polymerase Rpb2, domain 3 HFD79_17640 PF04561 RNA polymerase Rpb2, domain 2 HFD79_17645 PF00542 Ribosomal protein L7/L12 C-terminal domain HFD79_17645 PF16320 Ribosomal protein L7/L12 dimerisation domain HFD79_17650 PF00466 Ribosomal protein L10 HFD79_17655 PF00687 Ribosomal protein L1p/L10e family HFD79_17660 PF03946 Ribosomal protein L11, N-terminal domain HFD79_17660 PF00298 Ribosomal protein L11, RNA binding domain HFD79_17665 PF00467 KOW motif HFD79_17665 PF02357 Transcription termination factor nusG HFD79_17670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HFD79_17680 PF03144 Elongation factor Tu domain 2 HFD79_17680 PF03143 Elongation factor Tu C-terminal domain HFD79_17680 PF00009 Elongation factor Tu GTP binding domain HFD79_17705 PF00425 chorismate binding enzyme HFD79_17705 PF04715 Anthranilate synthase component I, N terminal region HFD79_17710 PF13419 Haloacid dehalogenase-like hydrolase HFD79_17715 PF12401 Protein of unknown function (DUF2662) HFD79_17715 PF00498 FHA domain HFD79_17720 PF00263 Bacterial type II and III secretion system protein HFD79_17720 PF03958 Bacterial type II/III secretion system short domain HFD79_17735 PF00816 H-NS histone family HFD79_17760 PF03900 Porphobilinogen deaminase, C-terminal domain HFD79_17760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HFD79_17765 PF00072 Response regulator receiver domain HFD79_17765 PF04397 LytTr DNA-binding domain HFD79_17770 PF07694 5TMR of 5TMR-LYT HFD79_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_17770 PF06580 Histidine kinase HFD79_17775 PF14698 Argininosuccinate lyase C-terminal HFD79_17775 PF00206 Lyase HFD79_17780 PF04362 Bacterial Fe(2+) trafficking HFD79_17785 PF01895 PhoU domain HFD79_17790 PF02321 Outer membrane efflux protein HFD79_17795 PF00892 EamA-like transporter family HFD79_17810 PF01964 Radical SAM ThiC family HFD79_17810 PF13667 ThiC-associated domain HFD79_17815 PF00293 NUDIX domain HFD79_17820 PF00149 Calcineurin-like phosphoesterase HFD79_17825 PF01258 Prokaryotic dksA/traR C4-type zinc finger HFD79_17830 PF00749 tRNA synthetases class I (E and Q), catalytic domain HFD79_17835 PF01098 Cell cycle protein HFD79_17840 PF02875 Mur ligase family, glutamate ligase domain HFD79_17840 PF08245 Mur ligase middle domain HFD79_17850 PF07664 Ferrous iron transport protein B C terminus HFD79_17850 PF07670 Nucleoside recognition HFD79_17850 PF02421 Ferrous iron transport protein B HFD79_17860 PF02899 Phage integrase, N-terminal SAM-like domain HFD79_17860 PF00589 Phage integrase family HFD79_17865 PF13098 Thioredoxin-like domain HFD79_17865 PF10411 Disulfide bond isomerase protein N-terminus HFD79_17870 PF01842 ACT domain HFD79_17870 PF00742 Homoserine dehydrogenase HFD79_17870 PF03447 Homoserine dehydrogenase, NAD binding domain HFD79_17875 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_17880 PF00768 D-alanyl-D-alanine carboxypeptidase HFD79_17885 PF00072 Response regulator receiver domain HFD79_17885 PF00196 Bacterial regulatory proteins, luxR family HFD79_17890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HFD79_17890 PF00512 His Kinase A (phospho-acceptor) domain HFD79_17895 PF02954 Bacterial regulatory protein, Fis family HFD79_17895 PF00072 Response regulator receiver domain HFD79_17895 PF00158 Sigma-54 interaction domain HFD79_17900 PF00595 PDZ domain HFD79_17900 PF03572 Peptidase family S41 HFD79_17905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HFD79_17905 PF01676 Metalloenzyme superfamily HFD79_17910 PF03739 Lipopolysaccharide export system permease LptF/LptG HFD79_17920 PF00883 Cytosol aminopeptidase family, catalytic domain HFD79_17920 PF02789 Cytosol aminopeptidase family, N-terminal domain HFD79_17940 PF00677 Lumazine binding domain HFD79_17950 PF01872 RibD C-terminal domain HFD79_17950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HFD79_17955 PF03477 ATP cone domain HFD79_17960 PF00909 Ammonium Transporter Family HFD79_17965 PF00543 Nitrogen regulatory protein P-II HFD79_17975 PF01078 Magnesium chelatase, subunit ChlI HFD79_17975 PF13335 Magnesium chelatase, subunit ChlI C-terminal HFD79_17985 PF01636 Phosphotransferase enzyme family HFD79_17990 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HFD79_18020 PF00440 Bacterial regulatory proteins, tetR family HFD79_18020 PF02909 Tetracyclin repressor-like, C-terminal domain HFD79_18025 PF07690 Major Facilitator Superfamily HFD79_18045 PF01740 STAS domain HFD79_18045 PF00916 Sulfate permease family HFD79_18050 PF00582 Universal stress protein family HFD79_18080 PF00665 Integrase core domain HFD79_18095 PF01078 Magnesium chelatase, subunit ChlI HFD79_18095 PF13335 Magnesium chelatase, subunit ChlI C-terminal HFD79_18100 PF00155 Aminotransferase class I and II HFD79_18100 PF00392 Bacterial regulatory proteins, gntR family HFD79_18110 PF00701 Dihydrodipicolinate synthetase family HFD79_18120 PF03573 outer membrane porin, OprD family HFD79_18125 PF00719 Inorganic pyrophosphatase HFD79_18140 PF00501 AMP-binding enzyme HFD79_18140 PF13193 AMP-binding enzyme C-terminal domain HFD79_18145 PF03989 DNA gyrase C-terminal domain, beta-propeller HFD79_18145 PF00521 DNA gyrase/topoisomerase IV, subunit A HFD79_18150 PF07690 Major Facilitator Superfamily HFD79_18155 PF03458 UPF0126 domain HFD79_18160 PF02810 SEC-C motif HFD79_18165 PF03741 Integral membrane protein TerC family HFD79_18165 PF03471 Transporter associated domain HFD79_18170 PF03641 Possible lysine decarboxylase HFD79_18175 PF07690 Major Facilitator Superfamily HFD79_18185 PF00817 impB/mucB/samB family HFD79_18185 PF11799 impB/mucB/samB family C-terminal domain HFD79_18185 PF11798 IMS family HHH motif HFD79_18200 PF08497 Radical SAM N-terminal HFD79_18200 PF04055 Radical SAM superfamily HFD79_18200 PF11842 Domain of unknown function (DUF3362) HFD79_18220 PF03358 NADPH-dependent FMN reductase HFD79_18230 PF00291 Pyridoxal-phosphate dependent enzyme HFD79_18265 PF00440 Bacterial regulatory proteins, tetR family HFD79_18290 PF01327 Polypeptide deformylase HFD79_18300 PF17782 DprA winged helix domain HFD79_18300 PF02481 DNA recombination-mediator protein A HFD79_18305 PF01300 Telomere recombination HFD79_18310 PF00892 EamA-like transporter family HFD79_18315 PF00440 Bacterial regulatory proteins, tetR family HFD79_18320 PF07690 Major Facilitator Superfamily HFD79_18330 PF00255 Glutathione peroxidase HFD79_18340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HFD79_18345 PF02874 ATP synthase alpha/beta family, beta-barrel domain HFD79_18345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HFD79_18350 PF00231 ATP synthase HFD79_18355 PF02874 ATP synthase alpha/beta family, beta-barrel domain HFD79_18355 PF00306 ATP synthase alpha/beta chain, C terminal domain HFD79_18355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HFD79_18360 PF00213 ATP synthase delta (OSCP) subunit HFD79_18365 PF00430 ATP synthase B/B' CF(0) HFD79_18370 PF00137 ATP synthase subunit C HFD79_18375 PF00119 ATP synthase A chain HFD79_18395 PF00005 ABC transporter HFD79_18400 PF00950 ABC 3 transport family HFD79_18405 PF01810 LysE type translocator HFD79_18410 PF04261 Dyp-type peroxidase family HFD79_18420 PF03949 Malic enzyme, NAD binding domain HFD79_18420 PF00390 Malic enzyme, N-terminal domain HFD79_18425 PF03485 Arginyl tRNA synthetase N terminal domain HFD79_18425 PF05746 DALR anticodon binding domain HFD79_18425 PF00750 tRNA synthetases class I (R) HFD79_18445 PF05726 Pirin C-terminal cupin domain HFD79_18445 PF02678 Pirin HFD79_18455 PF03551 Transcriptional regulator PadR-like family HFD79_18460 PF01909 Nucleotidyltransferase domain HFD79_18460 PF13427 Domain of unknown function (DUF4111) HFD79_18465 PF00117 Glutamine amidotransferase class-I HFD79_18465 PF00958 GMP synthase C terminal domain HFD79_18465 PF02540 NAD synthase HFD79_18470 PF04286 Protein of unknown function (DUF445) HFD79_18475 PF07681 DoxX HFD79_18480 PF09335 SNARE associated Golgi protein HFD79_18495 PF13614 AAA domain HFD79_18505 PF01722 BolA-like protein HFD79_18520 PF01648 4'-phosphopantetheinyl transferase superfamily HFD79_18525 PF12697 Alpha/beta hydrolase family HFD79_18545 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_18545 PF16197 Ketoacyl-synthetase C-terminal extension HFD79_18545 PF14765 Polyketide synthase dehydratase HFD79_18545 PF08242 Methyltransferase domain HFD79_18545 PF00550 Phosphopantetheine attachment site HFD79_18545 PF00975 Thioesterase domain HFD79_18545 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_18550 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_18550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_18550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_18555 PF00501 AMP-binding enzyme HFD79_18560 PF00196 Bacterial regulatory proteins, luxR family HFD79_18560 PF03472 Autoinducer binding domain HFD79_18570 PF00765 Autoinducer synthase HFD79_18575 PF07690 Major Facilitator Superfamily HFD79_18575 PF00083 Sugar (and other) transporter HFD79_18580 PF00378 Enoyl-CoA hydratase/isomerase HFD79_18585 PF00378 Enoyl-CoA hydratase/isomerase HFD79_18590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HFD79_18590 PF02770 Acyl-CoA dehydrogenase, middle domain HFD79_18590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HFD79_18595 PF13193 AMP-binding enzyme C-terminal domain HFD79_18595 PF00501 AMP-binding enzyme HFD79_18600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HFD79_18600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HFD79_18605 PF00171 Aldehyde dehydrogenase family HFD79_18615 PF00324 Amino acid permease HFD79_18620 PF00324 Amino acid permease HFD79_18625 PF01042 Endoribonuclease L-PSP HFD79_18630 PF01168 Alanine racemase, N-terminal domain HFD79_18630 PF00842 Alanine racemase, C-terminal domain HFD79_18635 PF01266 FAD dependent oxidoreductase HFD79_18640 PF01037 Lrp/AsnC ligand binding domain HFD79_18650 PF00593 TonB dependent receptor HFD79_18650 PF07715 TonB-dependent Receptor Plug Domain HFD79_18665 PF00849 RNA pseudouridylate synthase HFD79_18680 PF08361 MAATS-type transcriptional repressor, C-terminal region HFD79_18680 PF00440 Bacterial regulatory proteins, tetR family HFD79_18690 PF02801 Beta-ketoacyl synthase, C-terminal domain HFD79_18690 PF00109 Beta-ketoacyl synthase, N-terminal domain HFD79_18725 PF00694 Aconitase C-terminal domain HFD79_18725 PF00330 Aconitase family (aconitate hydratase) HFD79_18730 PF00285 Citrate synthase, C-terminal domain HFD79_18740 PF00392 Bacterial regulatory proteins, gntR family HFD79_18740 PF07729 FCD domain HFD79_18750 PF00155 Aminotransferase class I and II HFD79_18755 PF01565 FAD binding domain HFD79_18755 PF09330 D-lactate dehydrogenase, membrane binding HFD79_18760 PF01070 FMN-dependent dehydrogenase HFD79_18765 PF00392 Bacterial regulatory proteins, gntR family HFD79_18765 PF07729 FCD domain HFD79_18770 PF02652 L-lactate permease HFD79_18775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HFD79_18775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HFD79_18775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HFD79_18775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HFD79_18785 PF16363 GDP-mannose 4,6 dehydratase HFD79_18790 PF00342 Phosphoglucose isomerase HFD79_18795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HFD79_18795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HFD79_18795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HFD79_18800 PF00483 Nucleotidyl transferase HFD79_18805 PF02397 Bacterial sugar transferase HFD79_18810 PF00535 Glycosyl transferase family 2 HFD79_18815 PF00534 Glycosyl transferases group 1 HFD79_18825 PF00535 Glycosyl transferase family 2 HFD79_18835 PF13439 Glycosyltransferase Family 4 HFD79_18835 PF00534 Glycosyl transferases group 1 HFD79_18845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HFD79_18850 PF00132 Bacterial transferase hexapeptide (six repeats) HFD79_18855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HFD79_18855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HFD79_18860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HFD79_18860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HFD79_18860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HFD79_18865 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HFD79_18865 PF10531 SLBB domain HFD79_18865 PF02563 Polysaccharide biosynthesis/export protein HFD79_18870 PF01451 Low molecular weight phosphotyrosine protein phosphatase HFD79_18875 PF02706 Chain length determinant protein HFD79_18875 PF13807 G-rich domain on putative tyrosine kinase HFD79_18875 PF13614 AAA domain HFD79_18880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HFD79_18880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_18885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HFD79_18885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_18890 PF03023 Lipid II flippase MurJ HFD79_18895 PF01510 N-acetylmuramoyl-L-alanine amidase HFD79_18900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HFD79_18900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HFD79_18910 PF05506 Domain of unknown function (DUF756) HFD79_18910 PF04185 Phosphoesterase family HFD79_18915 PF01138 3' exoribonuclease family, domain 1 HFD79_18915 PF03725 3' exoribonuclease family, domain 2 HFD79_18920 PF00487 Fatty acid desaturase HFD79_18925 PF00175 Oxidoreductase NAD-binding domain HFD79_18930 PF00440 Bacterial regulatory proteins, tetR family HFD79_18935 PF08360 QacR-like protein, C-terminal region HFD79_18935 PF00440 Bacterial regulatory proteins, tetR family HFD79_18940 PF01323 DSBA-like thioredoxin domain HFD79_18950 PF13419 Haloacid dehalogenase-like hydrolase HFD79_18955 PF00106 short chain dehydrogenase HFD79_18970 PF00696 Amino acid kinase family HFD79_18970 PF00583 Acetyltransferase (GNAT) family HFD79_18975 PF09084 NMT1/THI5 like HFD79_18980 PF09084 NMT1/THI5 like HFD79_18985 PF00296 Luciferase-like monooxygenase HFD79_18990 PF00528 Binding-protein-dependent transport system inner membrane component HFD79_18995 PF00005 ABC transporter HFD79_19000 PF00440 Bacterial regulatory proteins, tetR family HFD79_19000 PF08362 YcdC-like protein, C-terminal region HFD79_19005 PF01048 Phosphorylase superfamily HFD79_19015 PF06574 FAD synthetase HFD79_19015 PF01687 Riboflavin kinase HFD79_19020 PF06827 Zinc finger found in FPG and IleRS HFD79_19020 PF08264 Anticodon-binding domain of tRNA HFD79_19020 PF00133 tRNA synthetases class I (I, L, M and V) HFD79_19025 PF01252 Signal peptidase (SPase) II HFD79_19030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HFD79_19070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HFD79_19075 PF07859 alpha/beta hydrolase fold HFD79_19100 PF01025 GrpE HFD79_19105 PF00012 Hsp70 protein HFD79_19125 PF13406 Transglycosylase SLT domain HFD79_19130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HFD79_19130 PF02222 ATP-grasp domain HFD79_19135 PF00731 AIR carboxylase HFD79_19145 PF01225 Mur ligase family, catalytic domain HFD79_19145 PF08245 Mur ligase middle domain HFD79_19145 PF02875 Mur ligase family, glutamate ligase domain HFD79_19155 PF01569 PAP2 superfamily HFD79_19160 PF03741 Integral membrane protein TerC family HFD79_19170 PF03738 Glutathionylspermidine synthase preATP-grasp HFD79_19175 PF00355 Rieske [2Fe-2S] domain HFD79_19180 PF01979 Amidohydrolase family HFD79_19185 PF00156 Phosphoribosyl transferase domain HFD79_19195 PF13098 Thioredoxin-like domain HFD79_19195 PF10411 Disulfide bond isomerase protein N-terminus HFD79_19200 PF01545 Cation efflux family HFD79_19200 PF16916 Dimerisation domain of Zinc Transporter HFD79_19205 PF02583 Metal-sensitive transcriptional repressor HFD79_19210 PF01926 50S ribosome-binding GTPase HFD79_19210 PF10396 GTP-binding protein TrmE N-terminus HFD79_19210 PF12631 MnmE helical domain HFD79_19215 PF14849 YidC periplasmic domain HFD79_19215 PF02096 60Kd inner membrane protein HFD79_19220 PF01809 Putative membrane protein insertion efficiency factor HFD79_19225 PF00825 Ribonuclease P HFD79_19230 PF00468 Ribosomal protein L34 HFD79_19290 PF10410 DnaB-helicase binding domain of primase HFD79_19290 PF08275 DNA primase catalytic core, N-terminal domain HFD79_19290 PF01807 CHC2 zinc finger HFD79_19320 PF00625 Guanylate kinase HFD79_19335 PF07015 VirC1 protein HFD79_19345 PF00589 Phage integrase family HFD79_19345 PF02899 Phage integrase, N-terminal SAM-like domain HFD79_19380 PF02811 PHP domain HFD79_19380 PF07733 Bacterial DNA polymerase III alpha NTPase domain HFD79_19380 PF14579 Helix-hairpin-helix motif HFD79_19380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HFD79_19390 PF02811 PHP domain HFD79_19390 PF07733 Bacterial DNA polymerase III alpha NTPase domain HFD79_19390 PF14579 Helix-hairpin-helix motif HFD79_19390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HFD79_19405 PF00476 DNA polymerase family A HFD79_19405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HFD79_19405 PF01612 3'-5' exonuclease HFD79_19405 PF01367 5'-3' exonuclease, C-terminal SAM fold HFD79_19410 PF03161 LAGLIDADG DNA endonuclease family HFD79_19410 PF00154 recA bacterial DNA recombination protein HFD79_19435 PF06470 SMC proteins Flexible Hinge Domain HFD79_19435 PF02463 RecF/RecN/SMC N terminal domain HFD79_19455 PF00317 Ribonucleotide reductase, all-alpha domain HFD79_19455 PF02867 Ribonucleotide reductase, barrel domain HFD79_19455 PF03477 ATP cone domain HFD79_19460 PF00268 Ribonucleotide reductase, small chain HFD79_19500 PF00929 Exonuclease HFD79_19535 PF13737 Transposase DDE domain HFD79_19540 PF16884 N-terminal domain of oxidoreductase HFD79_19540 PF00107 Zinc-binding dehydrogenase HFD79_19550 PF00440 Bacterial regulatory proteins, tetR family HFD79_19550 PF16925 Tetracyclin repressor-like, C-terminal domain HFD79_19560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HFD79_19570 PF00465 Iron-containing alcohol dehydrogenase HFD79_19580 PF00756 Putative esterase HFD79_19585 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_19585 PF00107 Zinc-binding dehydrogenase HFD79_19590 PF02583 Metal-sensitive transcriptional repressor HFD79_19605 PF00107 Zinc-binding dehydrogenase HFD79_19605 PF13823 Alcohol dehydrogenase GroES-associated HFD79_19605 PF08240 Alcohol dehydrogenase GroES-like domain HFD79_19670 PF04650 YSIRK type signal peptide HFD79_19670 PF03373 Octapeptide repeat HFD79_19670 PF01476 LysM domain HFD79_19670 PF00746 LPXTG cell wall anchor motif HFD79_19670 PF02216 B domain HFD79_19685 PF17757 UvrB interaction domain HFD79_19685 PF02559 CarD-like/TRCF domain HFD79_19685 PF00270 DEAD/DEAH box helicase HFD79_19685 PF03461 TRCF domain HFD79_19685 PF00271 Helicase conserved C-terminal domain HFD79_19705 PF09383 NIL domain HFD79_19705 PF00005 ABC transporter HFD79_19860 PF07715 TonB-dependent Receptor Plug Domain HFD79_19860 PF00593 TonB dependent receptor