locus-tag	class	description
DU202_00001	COG0488	(ABC) transporter
DU202_00002	COG0586	Pfam SNARE associated Golgi protein
DU202_00004	COG0187	DNA topoisomerase II activity
DU202_00006	COG0592	DNA-directed DNA polymerase activity
DU202_00008	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DU202_00011	COG0706	membrane insertase activity
DU202_00014	COG1230	cation diffusion facilitator family transporter
DU202_00015	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DU202_00019	COG0402	S-adenosylhomocysteine deaminase activity
DU202_00021	COG0754	glutathionylspermidine amidase activity
DU202_00023	COG0861	Integral membrane protein TerC family
DU202_00024	COG0671	phosphoesterase, PA-phosphatase related
DU202_00026	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DU202_00029	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DU202_00030	COG2951	lytic endotransglycosylase activity
DU202_00036	COG0583	DNA-binding transcription factor activity
DU202_00041	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DU202_00049	COG1047	Peptidyl-prolyl cis-trans
DU202_00051	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DU202_00052	COG0196	riboflavin kinase activity
DU202_00054	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DU202_00055	COG1309	transcriptional regulator
DU202_00056	COG1116	anion transmembrane transporter activity
DU202_00057	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DU202_00058	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DU202_00059	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DU202_00060	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DU202_00064	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_00065	COG0546	phosphoglycolate phosphatase activity
DU202_00076	COG3023	N-Acetylmuramoyl-L-alanine amidase
DU202_00077	COG0728	peptidoglycan biosynthetic process
DU202_00083	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DU202_00084	COG1086	Polysaccharide biosynthesis protein
DU202_00085	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DU202_00086	COG1083	cytidylyl-transferase
DU202_00089	COG2089	acid synthase
DU202_00090	COG2244	polysaccharide biosynthetic process
DU202_00094	COG1216	Glycosyl transferase, family 2
DU202_00095	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DU202_00096	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DU202_00099	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DU202_00100	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DU202_00102	COG2186	Transcriptional regulator
DU202_00104	COG0277	FAD linked oxidase domain protein
DU202_00105	COG1448	Aminotransferase
DU202_00106	COG1802	Transcriptional regulator
DU202_00109	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DU202_00112	COG1051	belongs to the nudix hydrolase family
DU202_00121	COG0564	pseudouridine synthase activity
DU202_00126	COG1522	sequence-specific DNA binding
DU202_00129	COG0251	oxidation-reduction process
DU202_00130	COG1113	amino acid transport
DU202_00131	COG1113	amino acid transport
DU202_00135	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DU202_00136	COG1960	acyl-CoA dehydrogenase activity
DU202_00137	COG1024	Enoyl-CoA hydratase
DU202_00138	COG1024	Enoyl-CoA hydratase
DU202_00139	COG0477	Major facilitator Superfamily
DU202_00140	COG3916	Acyl-homoserine-lactone synthase
DU202_00143	COG2197	response regulator
DU202_00145	COG2197	response regulator
DU202_00147	COG1960	acyl-CoA dehydrogenase activity
DU202_00148	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DU202_00148	COG3321	synthase
DU202_00148	COG4221	oxidoreductase activity
DU202_00148	COG0300	oxidoreductase activity
DU202_00155	COG2267	carboxylic ester hydrolase activity
DU202_00159	COG0271	Belongs to the BolA IbaG family
DU202_00161	COG1192	Involved in chromosome partitioning
DU202_00164	COG0586	Pfam SNARE associated Golgi protein
DU202_00165	COG2259	Doxx family
DU202_00166	COG4399	Belongs to the UPF0754 family
DU202_00167	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DU202_00167	COG0519	Catalyzes the synthesis of GMP from XMP
DU202_00176	COG0281	malic enzyme
DU202_00178	COG2837	iron assimilation
DU202_00179	COG1280	lysine exporter protein (LysE YggA)
DU202_00180	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DU202_00181	COG1121	(ABC) transporter
DU202_00194	COG0386	Belongs to the glutathione peroxidase family
DU202_00197	COG1309	transcriptional regulator
DU202_00198	COG0697	spore germination
DU202_00200	COG0758	DNA mediated transformation
DU202_00209	COG1309	transcriptional regulator
DU202_00216	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DU202_00218	COG0655	NAD(P)H dehydrogenase (quinone) activity
DU202_00225	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DU202_00227	COG2814	Major facilitator Superfamily
DU202_00229	COG1253	flavin adenine dinucleotide binding
DU202_00231	COG2860	membrane
DU202_00232	COG0477	Major facilitator Superfamily
DU202_00234	COG0318	PFAM AMP-dependent synthetase and ligase
DU202_00237	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DU202_00241	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DU202_00243	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DU202_00244	COG0606	chelatase, subunit chli
DU202_00250	COG0589	response to stress
DU202_00251	COG0659	secondary active sulfate transmembrane transporter activity
DU202_00261	COG0606	chelatase, subunit chli
DU202_00263	COG0347	Belongs to the P(II) protein family
DU202_00264	COG0004	ammonium transporteR
DU202_00266	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DU202_00266	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DU202_00274	COG0795	lipopolysaccharide-transporting ATPase activity
DU202_00275	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DU202_00276	COG0793	Belongs to the peptidase S41A family
DU202_00279	COG2197	response regulator
DU202_00281	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DU202_00283	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DU202_00284	COG4974	Belongs to the 'phage' integrase family
DU202_00290	COG0772	Belongs to the SEDS family
DU202_00291	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DU202_00292	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DU202_00293	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DU202_00298	COG0697	spore germination
DU202_00299	COG1538	Outer membrane efflux protein
DU202_00303	COG3275	phosphorelay sensor kinase activity
DU202_00305	COG0181	hydroxymethylbilane synthase activity
DU202_00314	COG1716	ATPase activity
DU202_00315	COG0546	phosphoglycolate phosphatase activity
DU202_00334	COG0596	Alpha beta hydrolase
DU202_00335	COG2056	Na+-H+ antiporter family
DU202_00338	COG0326	Molecular chaperone. Has ATPase activity
DU202_00341	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DU202_00355	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DU202_00356	COG2169	Transcriptional regulator
DU202_00356	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DU202_00362	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DU202_00364	COG0497	DNA recombination
DU202_00367	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DU202_00369	COG0237	dephospho-CoA kinase activity
DU202_00379	COG0195	Participates in both transcription termination and antitermination
DU202_00383	COG2212	antiporter activity
DU202_00385	COG0651	ATP synthesis coupled electron transport
DU202_00386	COG1006	Multisubunit Na H antiporter MnhC subunit
DU202_00387	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DU202_00387	COG2111	Na H antiporter
DU202_00390	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DU202_00391	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DU202_00394	COG2226	methyltransferase
DU202_00398	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DU202_00399	COG1074	ATP-dependent DNA helicase activity
DU202_00400	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DU202_00404	COG0598	Magnesium transport protein CorA
DU202_00405	COG0789	Transcriptional regulator
DU202_00406	COG0484	heat shock protein binding
DU202_00408	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DU202_00409	COG0475	glutathione-regulated potassium exporter activity
DU202_00409	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DU202_00410	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DU202_00416	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DU202_00418	COG4535	Mg2 and Co2 transporter CorC
DU202_00419	COG0425	Belongs to the sulfur carrier protein TusA family
DU202_00420	COG0644	oxidoreductase
DU202_00420	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
DU202_00422	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DU202_00425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DU202_00426	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
DU202_00433	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DU202_00436	COG0534	Mate efflux family protein
DU202_00439	COG0534	Mate efflux family protein
DU202_00441	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DU202_00442	COG4221	oxidoreductase activity
DU202_00443	COG0583	DNA-binding transcription factor activity
DU202_00447	COG1530	ribonuclease E activity
DU202_00449	COG0546	phosphoglycolate phosphatase activity
DU202_00450	COG2378	regulation of single-species biofilm formation
DU202_00451	COG0625	glutathione transferase activity
DU202_00454	COG0583	DNA-binding transcription factor activity
DU202_00467	COG0473	3-isopropylmalate dehydrogenase activity
DU202_00478	COG1301	dicarboxylic acid transport
DU202_00480	COG1560	Kdo2-lipid A biosynthetic process
DU202_00481	COG1280	lysine exporter protein (LysE YggA)
DU202_00485	COG1733	regulation of RNA biosynthetic process
DU202_00490	COG0210	DNA helicase
DU202_00491	COG0724	RNA recognition motif
DU202_00495	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DU202_00495	COG4651	solute:proton antiporter activity
DU202_00496	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DU202_00497	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DU202_00500	COG0788	formyltetrahydrofolate deformylase activity
DU202_00520	COG2813	Specifically methylates the guanine in position
DU202_00520	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DU202_00522	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DU202_00524	COG4774	siderophore transport
DU202_00526	COG0740	serine-type endopeptidase activity
DU202_00530	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DU202_00530	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DU202_00531	COG0857	belongs to the CobB CobQ family
DU202_00531	COG0280	phosphate acetyltransferase
DU202_00532	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DU202_00534	COG0800	Aldolase
DU202_00536	COG3265	gluconokinase activity
DU202_00537	COG1012	belongs to the aldehyde dehydrogenase family
DU202_00539	COG2267	carboxylic ester hydrolase activity
DU202_00542	COG0793	Belongs to the peptidase S41A family
DU202_00549	COG1426	Protein conserved in bacteria
DU202_00557	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DU202_00558	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DU202_00560	COG0318	PFAM AMP-dependent synthetase and ligase
DU202_00563	COG2986	histidine ammonia-lyase
DU202_00571	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_00572	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DU202_00576	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DU202_00578	COG1162	GTPase activity
DU202_00579	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DU202_00582	COG1538	Outer membrane efflux protein
DU202_00583	COG1136	(ABC) transporter
DU202_00583	COG0577	efflux transmembrane transporter activity
DU202_00584	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_00589	COG0028	Belongs to the TPP enzyme family
DU202_00590	COG0440	acetolactate synthase activity
DU202_00598	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DU202_00601	COG0084	hydrolase, TatD family'
DU202_00604	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DU202_00605	COG0583	DNA-binding transcription factor activity
DU202_00607	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DU202_00610	COG2814	Major facilitator Superfamily
DU202_00612	COG0697	spore germination
DU202_00613	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DU202_00614	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DU202_00615	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DU202_00618	COG3622	Belongs to the hyi family
DU202_00619	COG2084	Dehydrogenase
DU202_00620	COG1024	Enoyl-CoA hydratase
DU202_00621	COG2205	protein histidine kinase activity
DU202_00621	COG5002	protein histidine kinase activity
DU202_00621	COG0784	Response regulator, receiver
DU202_00625	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DU202_00627	COG3956	TIGRFAM MazG family protein
DU202_00628	COG1555	photosystem II stabilization
DU202_00629	COG0617	tRNA 3'-terminal CCA addition
DU202_00630	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DU202_00634	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DU202_00635	COG3028	Belongs to the UPF0307 family
DU202_00636	COG0318	PFAM AMP-dependent synthetase and ligase
DU202_00640	COG0625	glutathione transferase activity
DU202_00641	COG1238	metal cluster binding
DU202_00644	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DU202_00649	COG0072	phenylalanine-tRNA ligase activity
DU202_00654	COG0248	Ppx GppA phosphatase
DU202_00656	COG0037	tRNA processing
DU202_00664	COG1764	response to oxidative stress
DU202_00665	COG1846	Transcriptional regulator
DU202_00667	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DU202_00679	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DU202_00680	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DU202_00681	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DU202_00683	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DU202_00694	COG1214	PFAM Peptidase M22, glycoprotease
DU202_00702	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DU202_00705	COG0561	phosphatase activity
DU202_00707	COG2132	Multicopper oxidase
DU202_00708	COG3667	copper resistance
DU202_00711	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DU202_00712	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DU202_00713	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DU202_00719	COG1063	alcohol dehydrogenase
DU202_00720	COG0583	DNA-binding transcription factor activity
DU202_00721	COG1960	acyl-CoA dehydrogenase activity
DU202_00722	COG2814	Major facilitator Superfamily
DU202_00723	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DU202_00725	COG1053	succinate dehydrogenase
DU202_00726	COG0583	DNA-binding transcription factor activity
DU202_00729	COG0583	DNA-binding transcription factor activity
DU202_00731	COG1473	amidohydrolase
DU202_00735	COG0583	DNA-binding transcription factor activity
DU202_00737	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DU202_00738	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_00743	COG0384	phenazine biosynthesis protein PhzF
DU202_00748	COG4993	Dehydrogenase
DU202_00769	COG2205	protein histidine kinase activity
DU202_00772	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DU202_00775	COG0745	RESPONSE REGULATOR receiver
DU202_00776	COG2205	protein histidine kinase activity
DU202_00783	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DU202_00789	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DU202_00790	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DU202_00794	COG0583	DNA-binding transcription factor activity
DU202_00798	COG0668	transmembrane transport
DU202_00800	COG2081	HI0933 family
DU202_00801	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DU202_00807	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DU202_00807	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DU202_00809	COG0489	protein tyrosine kinase activity
DU202_00819	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DU202_00821	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DU202_00825	COG0730	response to heat
DU202_00827	COG1196	nuclear chromosome segregation
DU202_00831	COG2223	nitrite transmembrane transporter activity
DU202_00832	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
DU202_00834	COG1877	trehalose-phosphatase activity
DU202_00835	COG0596	Alpha beta hydrolase
DU202_00835	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DU202_00835	COG2226	methyltransferase
DU202_00838	COG4106	trans-aconitate 2-methyltransferase activity
DU202_00841	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DU202_00842	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DU202_00843	COG0009	L-threonylcarbamoyladenylate synthase
DU202_00844	COG3101	peptidyl-lysine hydroxylation
DU202_00845	COG1399	metal-binding, possibly nucleic acid-binding protein
DU202_00850	COG1652	LysM domain
DU202_00851	COG0352	thiamine-phosphate diphosphorylase activity
DU202_00851	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DU202_00851	COG0351	phosphomethylpyrimidine kinase
DU202_00853	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DU202_00859	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DU202_00864	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
DU202_00867	COG0358	DNA primase activity
DU202_00869	COG0564	pseudouridine synthase activity
DU202_00874	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DU202_00877	COG0583	DNA-binding transcription factor activity
DU202_00878	COG0473	3-isopropylmalate dehydrogenase activity
DU202_00883	COG1012	belongs to the aldehyde dehydrogenase family
DU202_00887	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DU202_00887	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DU202_00899	COG0456	acetyltransferase
DU202_00901	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DU202_00902	COG0492	ferredoxin-NADP+ reductase activity
DU202_00903	COG1674	ftsk spoiiie
DU202_00903	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DU202_00904	COG1280	lysine exporter protein (LysE YggA)
DU202_00909	COG2894	cell division
DU202_00912	COG0204	Acyl-transferase
DU202_00913	COG2885	chlorophyll binding
DU202_00914	COG0210	DNA helicase
DU202_00916	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DU202_00919	COG0121	glutamine amidotransferase
DU202_00921	COG0121	glutamine amidotransferase
DU202_00925	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DU202_00926	COG0735	belongs to the Fur family
DU202_00931	COG0420	3'-5' exonuclease activity
DU202_00935	COG1090	epimerase
DU202_00938	COG2050	protein possibly involved in aromatic compounds catabolism
DU202_00940	COG2814	Major facilitator Superfamily
DU202_00941	COG0405	Gamma-glutamyltransferase
DU202_00950	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DU202_00973	COG1484	DNA-dependent DNA replication
DU202_01018	COG2026	Addiction module toxin, RelE StbE family
DU202_01026	COG0592	DNA-directed DNA polymerase activity
DU202_01042	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DU202_01054	COG0477	Major facilitator Superfamily
DU202_01055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DU202_01060	COG0531	amino acid
DU202_01061	COG2040	homocysteine
DU202_01066	COG1309	transcriptional regulator
DU202_01067	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DU202_01068	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DU202_01070	COG1607	acyl-coa hydrolase
DU202_01072	COG0523	cobalamin synthesis protein
DU202_01075	COG1301	dicarboxylic acid transport
DU202_01076	COG4681	YaeQ
DU202_01078	COG0726	polysaccharide deacetylase
DU202_01078	COG1649	PFAM Uncharacterised BCR, COG1649
DU202_01079	COG1215	transferase activity, transferring glycosyl groups
DU202_01081	COG1024	Enoyl-CoA hydratase
DU202_01085	COG1414	Transcriptional regulator
DU202_01089	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01091	COG0446	pyridine nucleotide-disulphide oxidoreductase
DU202_01092	COG2271	Major facilitator Superfamily
DU202_01094	COG2267	carboxylic ester hydrolase activity
DU202_01095	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01098	COG0028	Belongs to the TPP enzyme family
DU202_01100	COG0477	Major facilitator Superfamily
DU202_01101	COG0242	peptide deformylase activity
DU202_01102	COG2066	Belongs to the glutaminase family
DU202_01103	COG2207	Transcriptional regulator
DU202_01104	COG2223	nitrite transmembrane transporter activity
DU202_01107	COG0583	DNA-binding transcription factor activity
DU202_01108	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01109	COG2271	Major facilitator Superfamily
DU202_01110	COG3959	Transketolase, thiamine diphosphate binding domain
DU202_01111	COG3958	Transketolase
DU202_01113	COG0306	phosphate transporter
DU202_01117	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DU202_01127	COG4181	ATPase activity
DU202_01128	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DU202_01133	COG0583	DNA-binding transcription factor activity
DU202_01135	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DU202_01136	COG1773	rubredoxin
DU202_01146	COG2851	Citrate transporter
DU202_01147	COG1253	flavin adenine dinucleotide binding
DU202_01155	COG0804	urea catabolic process
DU202_01156	COG0804	urea catabolic process
DU202_01158	COG0830	nickel cation binding
DU202_01161	COG0742	ribosomal rna small subunit methyltransferase
DU202_01162	COG0768	penicillin binding
DU202_01166	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DU202_01167	COG2878	Part of a membrane complex involved in electron transport
DU202_01168	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DU202_01170	COG3384	dioxygenase
DU202_01175	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DU202_01241	COG0739	heme binding
DU202_01252	COG2194	sulfuric ester hydrolase activity
DU202_01259	COG0006	proline dipeptidase activity
DU202_01260	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DU202_01261	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DU202_01265	COG1279	arginine transmembrane transporter activity
DU202_01266	COG0583	DNA-binding transcription factor activity
DU202_01274	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DU202_01275	COG1388	LysM domain
DU202_01275	COG0741	lytic transglycosylase activity
DU202_01275	COG1388	LysM domain
DU202_01275	COG0741	lytic transglycosylase activity
DU202_01277	COG4174	ABC transporter (Permease)
DU202_01278	COG4239	(ABC) transporter, permease
DU202_01279	COG4172	Belongs to the ABC transporter superfamily
DU202_01283	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DU202_01285	COG5001	Diguanylate cyclase
DU202_01285	COG4251	negative regulation of phosphorylation
DU202_01285	COG2203	Gaf domain
DU202_01285	COG3706	GGDEF domain
DU202_01287	COG1902	pentaerythritol trinitrate reductase activity
DU202_01287	COG0446	pyridine nucleotide-disulphide oxidoreductase
DU202_01289	COG0582	viral genome integration into host DNA
DU202_01314	COG3152	Membrane
DU202_01319	COG2184	nucleotidyltransferase activity
DU202_01321	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DU202_01328	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DU202_01333	COG3316	Transposase and inactivated derivatives
DU202_01337	COG0789	Transcriptional regulator
DU202_01344	COG3316	Transposase and inactivated derivatives
DU202_01348	COG3316	Transposase and inactivated derivatives
DU202_01350	COG3316	Transposase and inactivated derivatives
DU202_01354	COG3316	Transposase and inactivated derivatives
DU202_01355	COG3038	cytochrome b561
DU202_01357	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DU202_01361	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DU202_01363	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DU202_01366	COG0667	Aldo Keto reductase
DU202_01368	COG1765	OsmC-like protein
DU202_01378	COG2885	chlorophyll binding
DU202_01380	COG0625	glutathione transferase activity
DU202_01381	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DU202_01385	COG3634	alkyl hydroperoxide reductase activity
DU202_01387	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DU202_01389	COG0450	alkyl hydroperoxide reductase
DU202_01390	COG1643	Atp-dependent helicase
DU202_01393	COG2814	Major facilitator Superfamily
DU202_01394	COG3135	benzoate transporter
DU202_01395	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01396	COG0543	2 iron, 2 sulfur cluster binding
DU202_01396	COG0633	Ferredoxin
DU202_01397	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DU202_01398	COG4638	Rieske (2fe-2S)
DU202_01399	COG0583	DNA-binding transcription factor activity
DU202_01412	COG1570	exodeoxyribonuclease VII activity
DU202_01419	COG1280	lysine exporter protein (LysE YggA)
DU202_01420	COG1278	Cold shock
DU202_01431	COG2814	Major facilitator Superfamily
DU202_01432	COG1733	regulation of RNA biosynthetic process
DU202_01439	COG0517	IMP dehydrogenase activity
DU202_01439	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DU202_01440	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DU202_01442	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DU202_01443	COG1137	ATPase activity
DU202_01444	COG1538	Outer membrane efflux protein
DU202_01452	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DU202_01455	COG1522	sequence-specific DNA binding
DU202_01456	COG5006	permease, DMT superfamily
DU202_01458	COG1560	Kdo2-lipid A biosynthetic process
DU202_01460	COG2814	Major facilitator Superfamily
DU202_01464	COG1250	3-hydroxyacyl-CoA dehydrogenase
DU202_01468	COG1011	Hydrolase
DU202_01472	COG3501	Rhs element vgr protein
DU202_01473	COG3209	COG3209 Rhs family protein
DU202_01476	COG0583	DNA-binding transcription factor activity
DU202_01477	COG1914	H( )-stimulated, divalent metal cation uptake system
DU202_01481	COG4770	biotin carboxylase activity
DU202_01482	COG0038	chloride channel
DU202_01487	COG1309	transcriptional regulator
DU202_01489	COG1063	alcohol dehydrogenase
DU202_01492	COG0439	Biotin carboxylase
DU202_01493	COG2249	NAD(P)H dehydrogenase (quinone) activity
DU202_01494	COG1733	regulation of RNA biosynthetic process
DU202_01498	COG0864	Transcriptional regulator
DU202_01500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DU202_01501	COG1116	anion transmembrane transporter activity
DU202_01505	COG2433	Pfam Transposase IS66
DU202_01519	COG2885	chlorophyll binding
DU202_01519	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DU202_01528	COG0583	DNA-binding transcription factor activity
DU202_01530	COG0590	tRNA wobble adenosine to inosine editing
DU202_01531	COG2807	transmembrane transport
DU202_01534	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DU202_01536	COG0789	Transcriptional regulator
DU202_01539	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DU202_01543	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DU202_01545	COG0446	pyridine nucleotide-disulphide oxidoreductase
DU202_01548	COG1012	belongs to the aldehyde dehydrogenase family
DU202_01549	COG0531	amino acid
DU202_01550	COG1760	l-serine dehydratase
DU202_01551	COG1012	belongs to the aldehyde dehydrogenase family
DU202_01551	COG2030	dehydratase
DU202_01552	COG3396	Phenylacetate-CoA oxygenase
DU202_01553	COG3460	Phenylacetate-CoA oxygenase
DU202_01554	COG3396	Phenylacetate-CoA oxygenase
DU202_01555	COG2151	metal-sulfur cluster biosynthetic enzyme
DU202_01556	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DU202_01557	COG1024	Enoyl-CoA hydratase
DU202_01558	COG1024	Enoyl-CoA hydratase
DU202_01559	COG1250	3-hydroxyacyl-CoA dehydrogenase
DU202_01560	COG0183	Belongs to the thiolase family
DU202_01561	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
DU202_01562	COG3327	negative regulation of DNA-templated transcription, initiation
DU202_01564	COG2050	protein possibly involved in aromatic compounds catabolism
DU202_01571	COG0753	catalase activity
DU202_01572	COG3038	cytochrome b561
DU202_01576	COG2267	carboxylic ester hydrolase activity
DU202_01577	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_01578	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DU202_01579	COG1012	belongs to the aldehyde dehydrogenase family
DU202_01580	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DU202_01582	COG1012	belongs to the aldehyde dehydrogenase family
DU202_01583	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DU202_01584	COG0583	DNA-binding transcription factor activity
DU202_01586	COG1414	Transcriptional regulator
DU202_01587	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DU202_01589	COG1840	ABC-type Fe3 transport system, periplasmic component
DU202_01590	COG3842	ATPase activity
DU202_01593	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DU202_01594	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DU202_01598	COG2814	Major facilitator Superfamily
DU202_01599	COG1960	acyl-CoA dehydrogenase activity
DU202_01602	COG1024	Enoyl-CoA hydratase
DU202_01604	COG2814	Major facilitator Superfamily
DU202_01606	COG0183	Belongs to the thiolase family
DU202_01607	COG1250	3-hydroxyacyl-CoA dehydrogenase
DU202_01608	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01609	COG1024	Enoyl-CoA hydratase
DU202_01610	COG1960	acyl-CoA dehydrogenase activity
DU202_01611	COG2814	Major facilitator Superfamily
DU202_01612	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DU202_01613	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DU202_01615	COG2814	Major facilitator Superfamily
DU202_01617	COG1960	acyl-CoA dehydrogenase activity
DU202_01621	COG0583	DNA-binding transcription factor activity
DU202_01624	COG1024	Enoyl-CoA hydratase
DU202_01625	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DU202_01626	COG1960	acyl-CoA dehydrogenase activity
DU202_01627	COG1309	transcriptional regulator
DU202_01628	COG0318	PFAM AMP-dependent synthetase and ligase
DU202_01632	COG0583	DNA-binding transcription factor activity
DU202_01646	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_01652	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DU202_01658	COG0784	Response regulator, receiver
DU202_01658	COG2205	protein histidine kinase activity
DU202_01661	COG0765	amino acid transport
DU202_01662	COG0765	amino acid transport
DU202_01663	COG1126	abc transporter atp-binding protein
DU202_01664	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DU202_01665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DU202_01667	COG1280	lysine exporter protein (LysE YggA)
DU202_01668	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DU202_01669	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DU202_01670	COG1045	serine acetyltransferase
DU202_01673	COG0583	DNA-binding transcription factor activity
DU202_01674	COG0625	glutathione transferase activity
DU202_01675	COG0625	glutathione transferase activity
DU202_01676	COG0583	DNA-binding transcription factor activity
DU202_01678	COG1346	cytolysis
DU202_01682	COG2814	Major facilitator Superfamily
DU202_01684	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
DU202_01685	COG3052	prosthetic group binding
DU202_01689	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DU202_01693	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DU202_01695	COG1294	oxidase, subunit
DU202_01696	COG1271	oxidase subunit
DU202_01701	COG0477	Major facilitator Superfamily
DU202_01705	COG4521	taurine ABC transporter
DU202_01708	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DU202_01709	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DU202_01710	COG2175	clavaminate synthase activity
DU202_01712	COG1953	Uracil, thiamine, allantoin
DU202_01714	COG0583	DNA-binding transcription factor activity
DU202_01716	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DU202_01721	COG0640	Transcriptional regulator
DU202_01722	COG0798	PFAM Bile acid sodium symporter
DU202_01723	COG0583	DNA-binding transcription factor activity
DU202_01726	COG3634	alkyl hydroperoxide reductase activity
DU202_01734	COG0436	Aminotransferase
DU202_01736	COG0386	Belongs to the glutathione peroxidase family
DU202_01745	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DU202_01750	COG0012	GTP binding
DU202_01751	COG2011	ABC-type metal ion transport system permease component
DU202_01752	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DU202_01754	COG1464	Belongs to the NlpA lipoprotein family
DU202_01761	COG0765	amino acid transport
DU202_01762	COG4597	amino acid ABC transporter
DU202_01763	COG0765	amino acid transport
DU202_01764	COG1126	abc transporter atp-binding protein
DU202_01766	COG1522	sequence-specific DNA binding
DU202_01769	COG1309	transcriptional regulator
DU202_01778	COG0583	DNA-binding transcription factor activity
DU202_01780	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DU202_01782	COG0697	spore germination
DU202_01788	COG3121	Chaperone
DU202_01789	COG3539	Fimbrial protein
DU202_01795	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DU202_01795	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DU202_01804	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DU202_01806	COG2353	YceI-like domain
DU202_01808	COG3698	Phosphodiester glycosidase
DU202_01811	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DU202_01812	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DU202_01812	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DU202_01812	COG0506	proline dehydrogenase activity
DU202_01814	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DU202_01815	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DU202_01820	COG1132	(ABC) transporter
DU202_01821	COG3122	Protein conserved in bacteria
DU202_01822	COG3619	membrane
DU202_01824	COG0640	Transcriptional regulator
DU202_01826	COG2850	peptidyl-arginine hydroxylation
DU202_01827	COG0424	maF-like protein
DU202_01831	COG0191	fructose-bisphosphate aldolase activity
DU202_01832	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DU202_01835	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DU202_01837	COG1192	Involved in chromosome partitioning
DU202_01838	COG1475	DNA binding
DU202_01839	COG0811	peptide transport
DU202_01841	COG1132	(ABC) transporter
DU202_01842	COG1663	tetraacyldisaccharide 4'-kinase activity
DU202_01846	COG0084	hydrolase, TatD family'
DU202_01849	COG2165	general secretion pathway protein
DU202_01855	COG0590	tRNA wobble adenosine to inosine editing
DU202_01859	COG0776	regulation of translation
DU202_01866	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DU202_01880	COG0305	Participates in initiation and elongation during chromosome replication
DU202_01897	COG4695	Portal protein
DU202_01909	COG0739	heme binding
DU202_01909	COG0741	lytic transglycosylase activity
DU202_01909	COG1196	nuclear chromosome segregation
DU202_01922	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DU202_01933	COG0339	signal peptide processing
DU202_01935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DU202_01942	COG0702	epimerase
DU202_01943	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DU202_01947	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DU202_01953	COG0316	Belongs to the HesB IscA family
DU202_01954	COG0822	iron-sulfur transferase activity
DU202_01959	COG0776	regulation of translation
DU202_01960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DU202_01961	COG2207	Transcriptional regulator
DU202_01962	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DU202_01963	COG1960	acyl-CoA dehydrogenase activity
DU202_01964	COG1960	acyl-CoA dehydrogenase activity
DU202_01967	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DU202_01971	COG4264	IucA IucC family
DU202_01972	COG4264	IucA IucC family
DU202_01980	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DU202_01983	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DU202_01989	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DU202_01990	COG0730	response to heat
DU202_01994	COG4773	Receptor
DU202_01995	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DU202_01998	COG1131	(ABC) transporter
DU202_01999	COG0842	Transport permease protein
DU202_02000	COG0842	Transport permease protein
DU202_02011	COG2226	methyltransferase
DU202_02016	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DU202_02023	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DU202_02025	COG0133	tryptophan synthase activity
DU202_02028	COG3706	GGDEF domain
DU202_02031	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DU202_02032	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DU202_02033	COG0022	dehydrogenase e1 component
DU202_02034	COG0508	dehydrogenase complex catalyzes the overall conversion of
DU202_02035	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DU202_02037	COG1063	alcohol dehydrogenase
DU202_02038	COG3781	membrane
DU202_02040	COG3453	Protein conserved in bacteria
DU202_02040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DU202_02042	COG0730	response to heat
DU202_02045	COG2207	Transcriptional regulator
DU202_02045	COG3708	Transcriptional regulator
DU202_02046	COG1733	regulation of RNA biosynthetic process
DU202_02047	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DU202_02052	COG4521	taurine ABC transporter
DU202_02053	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DU202_02057	COG0477	Major facilitator Superfamily
DU202_02060	COG1027	Aspartate ammonia-lyase
DU202_02063	COG0583	DNA-binding transcription factor activity
DU202_02066	COG0583	DNA-binding transcription factor activity
DU202_02067	COG0583	DNA-binding transcription factor activity
DU202_02068	COG0183	Belongs to the thiolase family
DU202_02069	COG2031	fatty acid transporter
DU202_02070	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DU202_02072	COG0583	DNA-binding transcription factor activity
DU202_02074	COG2610	gluconate transmembrane transporter activity
DU202_02075	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02076	COG2207	Transcriptional regulator
DU202_02078	COG0412	Dienelactone hydrolase
DU202_02079	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02081	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_02084	COG0543	2 iron, 2 sulfur cluster binding
DU202_02084	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DU202_02085	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DU202_02086	COG4638	Rieske (2fe-2S)
DU202_02088	COG0725	ABC transporter, periplasmic molybdate-binding protein
DU202_02089	COG4149	molybdate abc transporter
DU202_02090	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
DU202_02091	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02092	COG3433	isochorismatase activity
DU202_02092	COG1535	isochorismatase
DU202_02104	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DU202_02107	COG0753	catalase activity
DU202_02109	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DU202_02114	COG3539	Fimbrial protein
DU202_02119	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DU202_02123	COG2072	flavoprotein involved in K transport
DU202_02126	COG1538	Outer membrane efflux protein
DU202_02127	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DU202_02128	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_02129	COG0745	RESPONSE REGULATOR receiver
DU202_02130	COG2205	protein histidine kinase activity
DU202_02132	COG2207	Transcriptional regulator
DU202_02135	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02142	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
DU202_02175	COG4397	Mu-like prophage major head subunit gpT
DU202_02178	COG5005	Phage virion morphogenesis
DU202_02179	COG2369	cell adhesion
DU202_02180	COG4383	Mu-like prophage protein gp29
DU202_02183	COG4373	Mu-like prophage FluMu protein gp28
DU202_02202	COG0776	regulation of translation
DU202_02228	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DU202_02232	COG1120	ATPase activity
DU202_02236	COG1064	alcohol dehydrogenase
DU202_02239	COG2207	Transcriptional regulator
DU202_02240	COG2084	Dehydrogenase
DU202_02242	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DU202_02243	COG0583	DNA-binding transcription factor activity
DU202_02245	COG0129	dihydroxy-acid dehydratase activity
DU202_02246	COG1012	belongs to the aldehyde dehydrogenase family
DU202_02249	COG1566	PFAM secretion protein HlyD family protein
DU202_02257	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DU202_02258	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DU202_02263	COG0583	DNA-binding transcription factor activity
DU202_02278	COG3210	domain, Protein
DU202_02279	COG2831	hemolysin activation secretion protein
DU202_02281	COG1473	amidohydrolase
DU202_02283	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DU202_02283	COG0475	glutathione-regulated potassium exporter activity
DU202_02285	COG0583	DNA-binding transcription factor activity
DU202_02286	COG1335	isochorismatase
DU202_02288	COG1309	transcriptional regulator
DU202_02294	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DU202_02296	COG0446	pyridine nucleotide-disulphide oxidoreductase
DU202_02296	COG1902	pentaerythritol trinitrate reductase activity
DU202_02299	COG1846	Transcriptional regulator
DU202_02303	COG0753	catalase activity
DU202_02306	COG1012	belongs to the aldehyde dehydrogenase family
DU202_02309	COG3162	membrane
DU202_02311	COG3829	transcription factor binding
DU202_02312	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02313	COG1960	acyl-CoA dehydrogenase activity
DU202_02317	COG1012	belongs to the aldehyde dehydrogenase family
DU202_02321	COG2186	Transcriptional regulator
DU202_02323	COG0583	DNA-binding transcription factor activity
DU202_02324	COG4948	Mandelate Racemase Muconate Lactonizing
DU202_02325	COG4829	muconolactone delta-isomerase
DU202_02327	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DU202_02328	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DU202_02329	COG0183	Belongs to the thiolase family
DU202_02330	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DU202_02332	COG1012	belongs to the aldehyde dehydrogenase family
DU202_02334	COG3733	amine oxidase
DU202_02336	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_02338	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_02340	COG4638	Rieske (2fe-2S)
DU202_02344	COG0154	amidase activity
DU202_02346	COG2814	Major facilitator Superfamily
DU202_02351	COG1960	acyl-CoA dehydrogenase activity
DU202_02352	COG0583	DNA-binding transcription factor activity
DU202_02353	COG1414	Transcriptional regulator
DU202_02356	COG2391	methyltransferase activity
DU202_02358	COG4993	Dehydrogenase
DU202_02359	COG3659	wide pore channel activity
DU202_02360	COG3420	alginic acid biosynthetic process
DU202_02361	COG0710	3-dehydroquinate dehydratase activity
DU202_02362	COG3485	protocatechuate 3,4-dioxygenase
DU202_02363	COG3485	protocatechuate 3,4-dioxygenase
DU202_02364	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DU202_02365	COG2271	Major facilitator Superfamily
DU202_02366	COG0596	Alpha beta hydrolase
DU202_02367	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DU202_02368	COG0183	Belongs to the thiolase family
DU202_02369	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DU202_02370	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DU202_02372	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DU202_02373	COG2323	membrane
DU202_02382	COG0446	pyridine nucleotide-disulphide oxidoreductase
DU202_02382	COG1902	pentaerythritol trinitrate reductase activity
DU202_02385	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DU202_02387	COG0542	response to heat
DU202_02388	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DU202_02394	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DU202_02395	COG0569	domain protein
DU202_02396	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DU202_02399	COG4774	siderophore transport
DU202_02400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DU202_02402	COG1585	Membrane protein implicated in regulation of membrane protease activity
DU202_02407	COG1294	oxidase, subunit
DU202_02408	COG4890	Cyd operon protein YbgT
DU202_02411	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
DU202_02413	COG0552	protein localization to endoplasmic reticulum
DU202_02418	COG0516	GMP reductase activity
DU202_02418	COG0517	IMP dehydrogenase activity
DU202_02419	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DU202_02420	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DU202_02422	COG0583	DNA-binding transcription factor activity
DU202_02423	COG0024	Methionine aminopeptidase
DU202_02429	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DU202_02429	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DU202_02430	COG1105	Belongs to the carbohydrate kinase PfkB family
DU202_02431	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DU202_02431	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DU202_02431	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DU202_02436	COG3300	MHYT domain
DU202_02436	COG5001	Diguanylate cyclase
DU202_02439	COG2135	peptidase activity
DU202_02440	COG0659	secondary active sulfate transmembrane transporter activity
DU202_02444	COG1113	amino acid transport
DU202_02446	COG1522	sequence-specific DNA binding
DU202_02451	COG1011	Hydrolase
DU202_02452	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DU202_02454	COG2137	regulation of response to DNA damage stimulus
DU202_02456	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DU202_02463	COG0575	Belongs to the CDS family
DU202_02464	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DU202_02468	COG3852	Histidine kinase
DU202_02469	COG2204	response regulator
DU202_02482	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DU202_02483	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DU202_02487	COG0697	spore germination
DU202_02488	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DU202_02490	COG0303	'Molybdopterin
DU202_02491	COG0521	Mo-molybdopterin cofactor biosynthetic process
DU202_02491	COG0315	cyclic pyranopterin monophosphate synthase activity
DU202_02494	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DU202_02495	COG0243	molybdopterin cofactor binding
DU202_02497	COG0243	molybdopterin cofactor binding
DU202_02498	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DU202_02499	COG2146	nitrite reductase [NAD(P)H] activity
DU202_02499	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DU202_02501	COG0745	RESPONSE REGULATOR receiver
DU202_02502	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DU202_02502	COG1116	anion transmembrane transporter activity
DU202_02505	COG0511	ligase activity, forming carbon-carbon bonds
DU202_02508	COG2814	Major facilitator Superfamily
DU202_02510	COG2194	sulfuric ester hydrolase activity
DU202_02530	COG0741	lytic transglycosylase activity
DU202_02530	COG1196	nuclear chromosome segregation
DU202_02530	COG0739	heme binding
DU202_02533	COG1598	PFAM Uncharacterised protein family UPF0150
DU202_02557	COG5410	chromosome segregation
DU202_02591	COG0069	glutamate synthase activity
DU202_02595	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DU202_02597	COG1454	alcohol dehydrogenase
DU202_02598	COG0824	Thioesterase
DU202_02601	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DU202_02607	COG0183	Belongs to the thiolase family
DU202_02609	COG0583	DNA-binding transcription factor activity
DU202_02612	COG1522	sequence-specific DNA binding
DU202_02613	COG3135	benzoate transporter
DU202_02615	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DU202_02620	COG0589	response to stress
DU202_02621	COG0488	(ABC) transporter
DU202_02625	COG4773	Receptor
DU202_02632	COG0668	transmembrane transport
DU202_02634	COG1309	transcriptional regulator
DU202_02638	COG1605	Chorismate mutase
DU202_02640	COG4221	oxidoreductase activity
DU202_02642	COG0308	aminopeptidase N
DU202_02646	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DU202_02648	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DU202_02649	COG1454	alcohol dehydrogenase
DU202_02653	COG0531	amino acid
DU202_02654	COG4303	Ethanolamine ammonia lyase large subunit
DU202_02655	COG4302	ethanolamine ammonia-lyase activity
DU202_02656	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DU202_02656	COG0519	Catalyzes the synthesis of GMP from XMP
DU202_02659	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DU202_02662	COG0697	spore germination
DU202_02663	COG1923	regulation of RNA biosynthetic process
DU202_02665	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DU202_02666	COG0802	atpase or kinase
DU202_02670	COG1187	pseudouridine synthase activity
DU202_02673	COG0583	DNA-binding transcription factor activity
DU202_02676	COG2814	Major facilitator Superfamily
DU202_02677	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DU202_02682	COG0729	surface antigen
DU202_02686	COG0174	glutamine synthetase
DU202_02687	COG0745	RESPONSE REGULATOR receiver
DU202_02688	COG2205	protein histidine kinase activity
DU202_02690	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DU202_02691	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DU202_02696	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_02697	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DU202_02698	COG1960	acyl-CoA dehydrogenase activity
DU202_02701	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DU202_02702	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DU202_02706	COG0583	DNA-binding transcription factor activity
DU202_02709	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DU202_02711	COG3658	cytochrome
DU202_02712	COG1215	transferase activity, transferring glycosyl groups
DU202_02713	COG0726	polysaccharide deacetylase
DU202_02713	COG1649	PFAM Uncharacterised BCR, COG1649
DU202_02720	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DU202_02721	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DU202_02723	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DU202_02728	COG0305	Participates in initiation and elongation during chromosome replication
DU202_02729	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DU202_02731	COG1305	Transglutaminase-like
DU202_02733	COG2308	Evidence 4 Homologs of previously reported genes of
DU202_02739	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DU202_02740	COG0138	bifunctional purine biosynthesis protein purh
DU202_02741	COG0151	Belongs to the GarS family
DU202_02742	COG1464	Belongs to the NlpA lipoprotein family
DU202_02743	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DU202_02744	COG2011	ABC-type metal ion transport system permease component
DU202_02745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DU202_02747	COG1301	dicarboxylic acid transport
DU202_02750	COG3316	Transposase and inactivated derivatives
DU202_02755	COG2433	Pfam Transposase IS66
DU202_02757	COG3173	Aminoglycoside phosphotransferase
DU202_02770	COG3316	Transposase and inactivated derivatives
DU202_02773	COG3316	Transposase and inactivated derivatives
DU202_02777	COG1794	racemase activity, acting on amino acids and derivatives
DU202_02779	COG3008	intermembrane lipid transfer
DU202_02779	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DU202_02780	COG2995	paraquat-inducible protein a
DU202_02782	COG2985	domain, Protein
DU202_02786	COG0477	Major facilitator Superfamily
DU202_02811	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DU202_02812	COG1610	YqeY-like protein
DU202_02813	COG4783	chaperone-mediated protein folding
DU202_02818	COG1286	toxin biosynthetic process
DU202_02859	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DU202_02874	COG0778	Nitroreductase
DU202_02876	COG0513	Belongs to the DEAD box helicase family
DU202_02880	COG2363	Small membrane protein
DU202_02886	COG1234	tRNA 3'-trailer cleavage
DU202_02887	COG2195	Cleaves the N-terminal amino acid of tripeptides
DU202_02889	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DU202_02891	COG2819	hydrolase of the alpha beta superfamily
DU202_02892	COG1960	acyl-CoA dehydrogenase activity
DU202_02893	COG1301	dicarboxylic acid transport
DU202_02894	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DU202_02895	COG3139	Protein of unknown function (DUF1315)
DU202_02896	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DU202_02897	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DU202_02899	COG0494	nUDIX hydrolase
DU202_02901	COG0642	Histidine kinase
DU202_02902	COG0745	RESPONSE REGULATOR receiver
DU202_02906	COG1720	tRNA m6t6A37 methyltransferase activity
DU202_02909	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DU202_02911	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DU202_02913	COG4598	ABC transporter
DU202_02914	COG4160	amino acid transport
DU202_02915	COG4215	(ABC) transporter
DU202_02919	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_02921	COG1538	Outer membrane efflux protein
DU202_02928	COG1131	(ABC) transporter
DU202_02929	COG0842	Transport permease protein
DU202_02932	COG0772	Belongs to the SEDS family
DU202_02933	COG2951	lytic endotransglycosylase activity
DU202_02938	COG2207	Transcriptional regulator
DU202_02941	COG0052	Belongs to the universal ribosomal protein uS2 family
DU202_02942	COG0024	Methionine aminopeptidase
DU202_02944	COG2223	nitrite transmembrane transporter activity
DU202_02947	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DU202_02948	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DU202_02949	COG1960	acyl-CoA dehydrogenase activity
DU202_02952	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DU202_02953	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DU202_02954	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DU202_02960	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DU202_02961	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DU202_02962	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DU202_02969	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
DU202_02972	COG3104	oligopeptide transport
DU202_02974	COG0582	viral genome integration into host DNA
DU202_02986	COG0739	heme binding
DU202_03010	COG5410	chromosome segregation
DU202_03045	COG0512	Glutamine amidotransferase of anthranilate synthase
DU202_03046	COG0308	aminopeptidase N
DU202_03054	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DU202_03063	COG3739	integral membrane protein
DU202_03066	COG1169	isochorismate synthase
DU202_03068	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
DU202_03070	COG1132	(ABC) transporter
DU202_03073	COG3433	isochorismatase activity
DU202_03073	COG1535	isochorismatase
DU202_03074	COG1021	2,3-dihydroxybenzoate-AMP ligase
DU202_03075	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DU202_03077	COG4774	siderophore transport
DU202_03078	COG4607	ABC-type enterochelin transport system periplasmic component
DU202_03079	COG4604	ABC transporter, ATP-binding protein
DU202_03080	COG4605	iron ion homeostasis
DU202_03081	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DU202_03083	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DU202_03086	COG2964	Protein conserved in bacteria
DU202_03089	COG1741	Belongs to the pirin family
DU202_03092	COG1309	transcriptional regulator
DU202_03094	COG4948	Mandelate Racemase Muconate Lactonizing
DU202_03095	COG2814	Major facilitator Superfamily
DU202_03102	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
DU202_03102	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DU202_03103	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DU202_03106	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DU202_03108	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DU202_03109	COG0583	DNA-binding transcription factor activity
DU202_03110	COG1113	amino acid transport
DU202_03114	COG2508	Transcriptional regulator
DU202_03114	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DU202_03121	COG2879	small protein
DU202_03122	COG1966	Carbon starvation protein
DU202_03131	COG1067	ATP-dependent peptidase activity
DU202_03132	COG0583	DNA-binding transcription factor activity
DU202_03137	COG1686	Belongs to the peptidase S11 family
DU202_03138	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DU202_03145	COG0616	signal peptide processing
DU202_03146	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DU202_03148	COG0573	inorganic phosphate transmembrane transporter activity
DU202_03149	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DU202_03150	COG1113	amino acid transport
DU202_03151	COG3961	Belongs to the TPP enzyme family
DU202_03152	COG1522	sequence-specific DNA binding
DU202_03154	COG0076	glutamate decarboxylase activity
DU202_03155	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DU202_03157	COG1309	transcriptional regulator
DU202_03160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DU202_03167	COG0352	thiamine-phosphate diphosphorylase activity
DU202_03172	COG0612	Peptidase, M16
DU202_03175	COG0583	DNA-binding transcription factor activity
DU202_03176	COG0477	Major facilitator Superfamily
DU202_03180	COG1187	pseudouridine synthase activity
DU202_03183	COG1686	Belongs to the peptidase S11 family
DU202_03184	COG1252	NADH dehydrogenase
DU202_03186	COG0415	Belongs to the DNA photolyase family
DU202_03189	COG1215	transferase activity, transferring glycosyl groups
DU202_03195	COG2070	2-Nitropropane dioxygenase
DU202_03206	COG0556	nucleotide-excision repair
DU202_03215	COG4221	oxidoreductase activity
DU202_03217	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DU202_03218	COG1381	Involved in DNA repair and RecF pathway recombination
DU202_03220	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DU202_03223	COG0681	Belongs to the peptidase S26 family
DU202_03226	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DU202_03230	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DU202_03231	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DU202_03232	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DU202_03234	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DU202_03235	COG4208	sulfate ABC transporter
DU202_03236	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DU202_03237	COG0583	DNA-binding transcription factor activity
DU202_03238	COG4625	pathogenesis
DU202_03241	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DU202_03244	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DU202_03246	COG1056	cytidyltransferase-related domain
DU202_03246	COG1051	belongs to the nudix hydrolase family
DU202_03247	COG1024	Enoyl-CoA hydratase
DU202_03248	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DU202_03250	COG2814	Major facilitator Superfamily
DU202_03251	COG0047	phosphoribosylformylglycinamidine synthase activity
DU202_03251	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DU202_03255	COG1473	amidohydrolase
DU202_03256	COG0824	Thioesterase
DU202_03260	COG0823	Involved in the tonB-independent uptake of proteins
DU202_03264	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DU202_03271	COG0628	permease
DU202_03273	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DU202_03274	COG0596	Alpha beta hydrolase
DU202_03275	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DU202_03275	COG0616	signal peptide processing
DU202_03277	COG2333	competence protein COMEC
DU202_03277	COG0658	competence protein
DU202_03278	COG1136	(ABC) transporter
DU202_03279	COG4591	ABC-type transport system involved in lipoprotein release permease component
DU202_03286	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_03290	COG0463	Glycosyl transferase, family 2
DU202_03296	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DU202_03297	COG1280	lysine exporter protein (LysE YggA)
DU202_03299	COG0019	diaminopimelate decarboxylase activity
DU202_03301	COG1113	amino acid transport
DU202_03304	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
DU202_03306	COG3339	Conserved Protein
DU202_03307	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DU202_03308	COG0243	molybdopterin cofactor binding
DU202_03309	COG1929	Belongs to the glycerate kinase type-1 family
DU202_03312	COG0778	Nitroreductase
DU202_03318	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DU202_03322	COG0741	lytic transglycosylase activity
DU202_03326	COG0584	glycerophosphoryl diester phosphodiesterase
DU202_03327	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DU202_03335	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DU202_03341	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DU202_03342	COG0477	Major facilitator Superfamily
DU202_03352	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DU202_03353	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DU202_03358	COG0505	Belongs to the CarA family
DU202_03362	COG0589	response to stress
DU202_03371	COG2321	neutral zinc metallopeptidase
DU202_03372	COG2354	Protein conserved in bacteria
DU202_03376	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DU202_03379	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DU202_03380	COG1053	succinate dehydrogenase
DU202_03381	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DU202_03382	COG2009	succinate dehydrogenase
DU202_03390	COG2921	Belongs to the UPF0250 family
DU202_03391	COG0321	lipoyl(octanoyl) transferase activity
DU202_03394	COG0531	amino acid
DU202_03396	COG1733	regulation of RNA biosynthetic process
DU202_03397	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DU202_03398	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DU202_03398	COG1648	precorrin-2 dehydrogenase activity
DU202_03401	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DU202_03411	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_03413	COG1538	Outer membrane efflux protein
DU202_03414	COG0393	Putative heavy-metal-binding
DU202_03415	COG0393	Putative heavy-metal-binding
DU202_03417	COG1028	Short-chain dehydrogenase reductase Sdr
DU202_03419	COG0525	valine-tRNA ligase activity
DU202_03423	COG0583	DNA-binding transcription factor activity
DU202_03424	COG0004	ammonium transporteR
DU202_03426	COG0642	Histidine kinase
DU202_03427	COG0745	RESPONSE REGULATOR receiver
DU202_03428	COG2194	sulfuric ester hydrolase activity
DU202_03432	COG1752	Esterase of the alpha-beta hydrolase superfamily
DU202_03435	COG2315	Protein conserved in bacteria
DU202_03436	COG0142	geranyltranstransferase activity
DU202_03437	COG2828	Protein conserved in bacteria
DU202_03438	COG1113	amino acid transport
DU202_03442	COG2207	Transcriptional regulator
DU202_03451	COG2249	NAD(P)H dehydrogenase (quinone) activity
DU202_03455	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DU202_03457	COG1530	ribonuclease E activity
DU202_03458	COG0424	maF-like protein
DU202_03459	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DU202_03460	COG1792	Involved in formation and maintenance of cell shape
DU202_03461	COG1077	Cell shape determining protein MreB Mrl
DU202_03462	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DU202_03464	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DU202_03472	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
DU202_03473	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DU202_03474	COG1752	Esterase of the alpha-beta hydrolase superfamily
DU202_03475	COG1115	amino acid carrier protein
DU202_03478	COG2814	Major facilitator Superfamily
DU202_03479	COG1289	transmembrane transporter activity
DU202_03489	COG1376	ErfK ybiS ycfS ynhG family protein
DU202_03490	COG2832	Protein of unknown function (DUF454)
DU202_03492	COG5510	response to toxic substance
DU202_03496	COG0840	transmembrane signaling receptor activity
DU202_03504	COG3422	double-strand break repair
DU202_03505	COG2824	Alkylphosphonate utilization operon protein PhnA
DU202_03506	COG3189	MarR family transcriptional regulator
DU202_03508	COG0354	folic acid binding
DU202_03509	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DU202_03511	COG0679	Auxin Efflux Carrier
DU202_03512	COG1902	pentaerythritol trinitrate reductase activity
DU202_03513	COG4772	TonB-dependent receptor
DU202_03514	COG2094	Belongs to the DNA glycosylase MPG family
DU202_03520	COG2233	PERMEase
DU202_03522	COG0833	amino acid
DU202_03523	COG1690	Belongs to the RtcB family
DU202_03525	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DU202_03525	COG2885	chlorophyll binding
DU202_03527	COG0183	Belongs to the thiolase family
DU202_03532	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DU202_03536	COG2207	Transcriptional regulator
DU202_03537	COG0183	Belongs to the thiolase family
DU202_03544	COG1272	protein, Hemolysin III
DU202_03545	COG0477	Major facilitator Superfamily
DU202_03548	COG0450	alkyl hydroperoxide reductase
DU202_03552	COG0285	dihydrofolate synthase activity
DU202_03559	COG0133	tryptophan synthase activity
DU202_03562	COG2096	Adenosyltransferase
DU202_03566	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DU202_03567	COG0745	RESPONSE REGULATOR receiver
DU202_03568	COG2205	protein histidine kinase activity
DU202_03570	COG1960	acyl-CoA dehydrogenase activity
DU202_03571	COG1960	acyl-CoA dehydrogenase activity
DU202_03572	COG0583	DNA-binding transcription factor activity
DU202_03573	COG0625	glutathione transferase activity
DU202_03587	COG0438	transferase activity, transferring glycosyl groups
DU202_03588	COG0463	Glycosyl transferase, family 2
DU202_03594	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
DU202_03595	COG2205	protein histidine kinase activity
DU202_03607	COG1862	Preprotein translocase
DU202_03609	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DU202_03610	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DU202_03612	COG3781	membrane
DU202_03613	COG0613	PHP domain protein
DU202_03615	COG2350	Protein conserved in bacteria
DU202_03621	COG1607	acyl-coa hydrolase
DU202_03624	COG3453	Protein conserved in bacteria
DU202_03624	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DU202_03633	COG2199	diguanylate cyclase activity
DU202_03635	COG1408	metallophosphoesterase
DU202_03636	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DU202_03638	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DU202_03642	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DU202_03643	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DU202_03646	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DU202_03648	COG2969	positive regulation of protein catabolic process
DU202_03652	COG1960	acyl-CoA dehydrogenase activity
DU202_03653	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DU202_03656	COG1309	transcriptional regulator
DU202_03657	COG1960	acyl-CoA dehydrogenase activity
DU202_03666	COG1183	phosphatidylcholine synthase activity
DU202_03667	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DU202_03673	COG0739	heme binding
DU202_03673	COG0741	lytic transglycosylase activity
DU202_03673	COG1196	nuclear chromosome segregation
DU202_03675	COG1702	phosphate starvation-inducible protein PhoH
DU202_03682	COG1295	ribonuclease BN
DU202_03683	COG0697	spore germination
DU202_03684	COG2169	Transcriptional regulator
DU202_03685	COG0179	Fumarylacetoacetate (FAA) hydrolase
DU202_03694	COG0557	exoribonuclease II activity
DU202_03695	COG0339	signal peptide processing
DU202_03696	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DU202_03703	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DU202_03704	COG1960	acyl-CoA dehydrogenase activity
DU202_03709	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DU202_03711	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DU202_03735	COG0626	cystathionine gamma-synthase activity
DU202_03736	COG0433	COG0433 Predicted ATPase
DU202_03737	COG1017	nitric oxide dioxygenase activity
DU202_03737	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DU202_03738	COG1959	2 iron, 2 sulfur cluster binding
DU202_03741	COG1301	dicarboxylic acid transport
DU202_03742	COG1946	Acyl-CoA thioesterase
DU202_03746	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DU202_03747	COG1040	competence protein
DU202_03748	COG0494	nUDIX hydrolase
DU202_03750	COG0598	Magnesium transport protein CorA
DU202_03752	COG2854	intermembrane phospholipid transfer
DU202_03754	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DU202_03755	COG1127	ABC transporter
DU202_03757	COG0513	Belongs to the DEAD box helicase family
DU202_03761	COG0408	coproporphyrinogen oxidase activity
DU202_03764	COG1960	acyl-CoA dehydrogenase activity
DU202_03766	COG1983	PspC domain protein
DU202_03767	COG0517	IMP dehydrogenase activity
DU202_03776	COG0583	DNA-binding transcription factor activity
DU202_03784	COG1012	belongs to the aldehyde dehydrogenase family
DU202_03786	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DU202_03787	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DU202_03788	COG0833	amino acid
DU202_03795	COG0628	permease
DU202_03797	COG1289	transmembrane transporter activity
DU202_03800	COG2249	NAD(P)H dehydrogenase (quinone) activity
DU202_03801	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DU202_03803	COG0277	FAD linked oxidase domain protein
DU202_03804	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DU202_03809	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DU202_03810	COG5380	lipid catabolic process
DU202_03814	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DU202_03825	COG0194	GDP metabolic process
DU202_03827	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DU202_03831	COG3307	-O-antigen
DU202_03835	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DU202_03836	COG1704	LemA family
DU202_03838	COG0493	'glutamate synthase
DU202_03839	COG0070	glutamate synthase
DU202_03839	COG0069	glutamate synthase activity
DU202_03839	COG0067	glutamate synthase
DU202_03849	COG2226	methyltransferase
DU202_03852	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DU202_03853	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DU202_03862	COG0833	amino acid
DU202_03875	COG0488	(ABC) transporter
DU202_03877	COG4221	oxidoreductase activity
DU202_03878	COG0659	secondary active sulfate transmembrane transporter activity
DU202_03880	COG0745	RESPONSE REGULATOR receiver
DU202_03882	COG0427	acetyl-CoA hydrolase
DU202_03888	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DU202_03896	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DU202_03907	COG2207	Transcriptional regulator
DU202_03908	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DU202_03911	COG2249	NAD(P)H dehydrogenase (quinone) activity
DU202_03912	COG1733	regulation of RNA biosynthetic process
DU202_03916	COG1733	regulation of RNA biosynthetic process
DU202_03923	COG0667	Aldo Keto reductase
DU202_03928	COG0583	DNA-binding transcription factor activity
DU202_03929	COG2814	Major facilitator Superfamily
DU202_03936	COG1335	isochorismatase
DU202_03938	COG1012	belongs to the aldehyde dehydrogenase family
DU202_03939	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DU202_03941	COG1113	amino acid transport
DU202_03943	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DU202_03946	COG2814	Major facilitator Superfamily
DU202_03948	COG0352	thiamine-phosphate diphosphorylase activity
DU202_03948	COG0351	phosphomethylpyrimidine kinase
DU202_03948	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DU202_03952	COG1309	transcriptional regulator
DU202_03953	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DU202_03954	COG3706	GGDEF domain
DU202_03956	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DU202_03958	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DU202_03959	COG3162	membrane
DU202_03960	COG0784	Response regulator, receiver
DU202_03960	COG2205	protein histidine kinase activity
DU202_03960	COG2198	Histidine kinase
DU202_03965	COG1522	sequence-specific DNA binding
DU202_03966	COG1335	isochorismatase
DU202_03967	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DU202_03969	COG0668	transmembrane transport
DU202_03970	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DU202_03971	COG1519	Transferase
DU202_03972	COG1902	pentaerythritol trinitrate reductase activity
DU202_03977	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DU202_03982	COG0426	domain, Protein
DU202_03982	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DU202_03983	COG4774	siderophore transport
DU202_03986	COG2119	membrane
DU202_03988	COG0508	dehydrogenase complex catalyzes the overall conversion of
DU202_03990	COG4942	peptidase
DU202_03993	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DU202_03995	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DU202_03999	COG0189	ligase activity
DU202_04004	COG0708	Exodeoxyribonuclease III
DU202_04005	COG1393	Belongs to the ArsC family
DU202_04009	COG3706	GGDEF domain
DU202_04017	COG2233	PERMEase
DU202_04019	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DU202_04021	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
DU202_04023	COG3150	esterase
DU202_04028	COG3179	chitinase
DU202_04029	COG3501	Rhs element vgr protein
DU202_04031	COG2918	glutathione biosynthetic process
DU202_04034	COG2733	membrane
DU202_04035	COG0436	Aminotransferase
DU202_04036	COG0534	Mate efflux family protein
DU202_04048	COG0753	catalase activity
DU202_04057	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DU202_04058	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DU202_04060	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DU202_04061	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DU202_04062	COG0546	phosphoglycolate phosphatase activity
DU202_04064	COG0010	Belongs to the arginase family
DU202_04073	COG2188	Transcriptional regulator
DU202_04075	COG0523	cobalamin synthesis protein
DU202_04077	COG1113	amino acid transport
DU202_04079	COG0625	glutathione transferase activity
DU202_04083	COG1683	Conserved Protein
DU202_04084	COG0534	Mate efflux family protein
DU202_04086	COG0385	Bile acid
DU202_04087	COG1335	isochorismatase
DU202_04088	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DU202_04092	COG2116	formate transmembrane transporter activity
DU202_04093	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DU202_04094	COG2133	pyrroloquinoline quinone binding
DU202_04095	COG2983	Belongs to the UPF0260 family
DU202_04099	COG1194	a g-specific adenine glycosylase
DU202_04102	COG2818	Glycosylase
DU202_04103	COG1064	alcohol dehydrogenase
DU202_04104	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DU202_04106	COG0583	DNA-binding transcription factor activity
DU202_04107	COG0656	L-ascorbic acid biosynthetic process
DU202_04108	COG2814	Major facilitator Superfamily
DU202_04115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DU202_04118	COG2233	PERMEase
DU202_04126	COG0733	neurotransmitter:sodium symporter activity
DU202_04134	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DU202_04135	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
DU202_04136	COG0596	Alpha beta hydrolase