DU202_00001 PF00005 ABC transporter DU202_00001 PF12848 ABC transporter DU202_00002 PF09335 DU202_00002 DU202_00003 PF07361 Cytochrome b562 DU202_00004 PF00204 DNA gyrase B DU202_00004 PF00986 DNA gyrase B subunit, carboxyl terminus DU202_00004 PF01751 Toprim domain DU202_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00005 PF02463 RecF/RecN/SMC N terminal domain DU202_00006 PF00712 DNA polymerase III beta subunit, N-terminal domain DU202_00006 PF02767 DNA polymerase III beta subunit, central domain DU202_00006 PF02768 DNA polymerase III beta subunit, C-terminal domain DU202_00007 PF00308 Bacterial dnaA protein DU202_00007 PF08299 Bacterial dnaA protein helix-turn-helix DU202_00007 PF11638 DnaA N-terminal domain DU202_00008 PF00468 Ribosomal protein L34 DU202_00009 PF00825 Ribonuclease P DU202_00010 PF01809 DU202_00010 DU202_00011 PF02096 60Kd inner membrane protein DU202_00011 PF14849 YidC periplasmic domain DU202_00012 PF01926 50S ribosome-binding GTPase DU202_00012 PF10396 GTP-binding protein TrmE N-terminus DU202_00012 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE DU202_00013 PF02583 Metal-sensitive transcriptional repressor DU202_00014 PF01545 Cation efflux family DU202_00015 PF10411 Disulfide bond isomerase protein N-terminus DU202_00015 PF13098 Thioredoxin-like domain DU202_00016 PF04226 DU202_00016 DU202_00017 PF00156 Phosphoribosyl transferase domain DU202_00019 PF01979 Amidohydrolase family DU202_00020 PF00355 Rieske [2Fe-2S] domain DU202_00021 PF03738 Glutathionylspermidine synthase preATP-grasp DU202_00023 PF03741 DU202_00023 DU202_00024 PF01569 PAP2 superfamily DU202_00025 PF06772 DU202_00025 DU202_00026 PF01225 Mur ligase family, catalytic domain DU202_00026 PF02875 Mur ligase family, glutamate ligase domain DU202_00026 PF08245 Mur ligase middle domain DU202_00027 PF04342 DU202_00027 DU202_00028 PF00731 AIR carboxylase DU202_00029 PF02222 ATP-grasp domain DU202_00030 PF01471 Putative peptidoglycan binding domain DU202_00030 PF13406 Transglycosylase SLT domain DU202_00032 PF00413 Matrixin DU202_00033 PF00413 Matrixin DU202_00034 PF00012 Hsp70 protein DU202_00035 PF01025 GrpE DU202_00036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00036 PF03466 LysR substrate binding domain DU202_00040 PF07859 alpha/beta hydrolase fold DU202_00041 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DU202_00047 PF12796 Ankyrin repeats (3 copies) DU202_00048 PF03358 NADPH-dependent FMN reductase DU202_00049 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_00050 PF01252 DU202_00050 DU202_00051 PF00133 tRNA synthetases class I (I, L, M and V) DU202_00051 PF06827 Zinc finger found in FPG and IleRS DU202_00051 PF08264 Anticodon-binding domain of tRNA DU202_00052 PF01687 Riboflavin kinase DU202_00052 PF06574 FAD synthetase DU202_00053 PF03595 Voltage-dependent anion channel DU202_00054 PF01048 Phosphorylase superfamily DU202_00055 PF00440 Bacterial regulatory proteins, tetR family DU202_00055 PF08362 YcdC-like protein, C-terminal region DU202_00056 PF00005 ABC transporter DU202_00057 PF00528 Binding-protein-dependent transport system inner membrane component DU202_00058 PF00296 Luciferase-like monooxygenase DU202_00059 PF13379 NMT1-like family DU202_00060 PF09084 NMT1/THI5 like DU202_00061 PF00583 Acetyltransferase (GNAT) family DU202_00061 PF00696 Amino acid kinase family DU202_00062 PF11776 Domain of unknown function (DUF3315) DU202_00063 PF11776 Domain of unknown function (DUF3315) DU202_00064 PF00106 short chain dehydrogenase DU202_00065 PF13419 Haloacid dehalogenase-like hydrolase DU202_00066 PF13489 Methyltransferase domain DU202_00067 PF01323 DSBA-like thioredoxin domain DU202_00068 PF00440 Bacterial regulatory proteins, tetR family DU202_00069 PF00440 Bacterial regulatory proteins, tetR family DU202_00070 PF00175 Oxidoreductase NAD-binding domain DU202_00070 PF00970 Oxidoreductase FAD-binding domain DU202_00071 PF00487 DU202_00071 DU202_00072 PF01138 3' exoribonuclease family, domain 1 DU202_00072 PF03725 3' exoribonuclease family, domain 2 DU202_00073 PF04185 Phosphoesterase family DU202_00073 PF05506 DU202_00073 DU202_00075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DU202_00075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DU202_00076 PF01510 N-acetylmuramoyl-L-alanine amidase DU202_00077 PF03023 DU202_00077 DU202_00078 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_00078 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DU202_00079 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_00079 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DU202_00080 PF02706 Chain length determinant protein DU202_00080 PF13614 AAA domain DU202_00080 PF13807 DU202_00080 DU202_00081 PF01451 Low molecular weight phosphotyrosine protein phosphatase DU202_00082 PF02563 Polysaccharide biosynthesis/export protein DU202_00083 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DU202_00083 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DU202_00083 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DU202_00084 PF02719 Polysaccharide biosynthesis protein DU202_00085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DU202_00086 PF02348 Cytidylyltransferase DU202_00087 PF04101 Glycosyltransferase family 28 C-terminal domain DU202_00088 PF13420 Acetyltransferase (GNAT) domain DU202_00089 PF03102 NeuB family DU202_00089 PF08666 SAF domain DU202_00090 PF01943 DU202_00090 DU202_00091 PF07922 Glycosyltransferase family 52 DU202_00093 PF02485 Core-2/I-Branching enzyme DU202_00094 PF00535 Glycosyl transferase family 2 DU202_00095 PF02397 DU202_00095 DU202_00096 PF00483 Nucleotidyl transferase DU202_00097 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DU202_00097 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DU202_00098 PF00342 Phosphoglucose isomerase DU202_00099 PF16363 DU202_00099 DU202_00100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DU202_00100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DU202_00100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DU202_00100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DU202_00101 PF02652 DU202_00101 DU202_00102 PF00392 Bacterial regulatory proteins, gntR family DU202_00102 PF07729 FCD domain DU202_00103 PF01070 FMN-dependent dehydrogenase DU202_00104 PF01565 FAD binding domain DU202_00104 PF09330 D-lactate dehydrogenase, membrane binding DU202_00105 PF00155 Aminotransferase class I and II DU202_00106 PF00392 Bacterial regulatory proteins, gntR family DU202_00106 PF07729 FCD domain DU202_00107 PF13714 Phosphoenolpyruvate phosphomutase DU202_00108 PF00285 Citrate synthase DU202_00109 PF00330 Aconitase family (aconitate hydratase) DU202_00109 PF00694 Aconitase C-terminal domain DU202_00111 PF13548 DU202_00111 DU202_00112 PF00293 NUDIX domain DU202_00113 PF13737 DU202_00113 DU202_00114 PF02452 PemK-like protein DU202_00115 PF12686 DU202_00115 DU202_00117 PF13737 DU202_00117 DU202_00118 PF00109 Beta-ketoacyl synthase, N-terminal domain DU202_00118 PF02801 Beta-ketoacyl synthase, C-terminal domain DU202_00119 PF00106 short chain dehydrogenase DU202_00120 PF06210 DU202_00120 DU202_00121 PF00849 RNA pseudouridylate synthase DU202_00122 PF06877 Regulator of ribonuclease activity B DU202_00123 PF12680 SnoaL-like domain DU202_00124 PF00593 TonB dependent receptor DU202_00124 PF07715 TonB-dependent Receptor Plug Domain DU202_00125 PF07786 DU202_00125 DU202_00126 PF01037 AsnC family DU202_00126 PF13412 Winged helix-turn-helix DNA-binding DU202_00127 PF01266 FAD dependent oxidoreductase DU202_00128 PF00842 Alanine racemase, C-terminal domain DU202_00128 PF01168 Alanine racemase, N-terminal domain DU202_00129 PF01042 Endoribonuclease L-PSP DU202_00130 PF00324 Amino acid permease DU202_00131 PF00324 Amino acid permease DU202_00132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00132 PF03466 LysR substrate binding domain DU202_00133 PF00171 Aldehyde dehydrogenase family DU202_00134 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DU202_00134 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DU202_00135 PF00501 AMP-binding enzyme DU202_00135 PF13193 AMP-binding enzyme C-terminal domain DU202_00136 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_00136 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_00136 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_00137 PF00378 Enoyl-CoA hydratase/isomerase family DU202_00138 PF16113 DU202_00138 DU202_00139 PF07690 Major Facilitator Superfamily DU202_00140 PF00765 Autoinducer synthetase DU202_00141 PF16245 DU202_00141 DU202_00142 PF13737 DU202_00142 DU202_00143 PF03472 Autoinducer binding domain DU202_00144 PF13737 DU202_00144 DU202_00145 PF00196 Bacterial regulatory proteins, luxR family DU202_00146 PF00501 AMP-binding enzyme DU202_00147 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_00147 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_00148 PF00550 Phosphopantetheine attachment site DU202_00149 PF00501 AMP-binding enzyme DU202_00149 PF00550 Phosphopantetheine attachment site DU202_00149 PF00668 Condensation domain DU202_00149 PF00975 Thioesterase domain DU202_00149 PF13193 AMP-binding enzyme C-terminal domain DU202_00150 PF03176 MMPL family DU202_00150 PF10604 Polyketide cyclase / dehydrase and lipid transport DU202_00151 PF13340 DU202_00151 DU202_00152 PF01609 Transposase DDE domain DU202_00153 PF03176 MMPL family DU202_00153 PF17131 DU202_00153 DU202_00155 PF01370 NAD dependent epimerase/dehydratase family DU202_00155 PF12697 Alpha/beta hydrolase family DU202_00156 PF01648 4'-phosphopantetheinyl transferase superfamily DU202_00159 PF01722 BolA-like protein DU202_00160 PF04247 DU202_00160 DU202_00161 PF13614 AAA domain DU202_00163 PF01810 DU202_00163 DU202_00164 PF09335 DU202_00164 DU202_00165 PF07681 DU202_00165 DU202_00166 PF04286 DU202_00166 DU202_00167 PF00117 Glutamine amidotransferase class-I DU202_00167 PF00958 GMP synthase C terminal domain DU202_00167 PF02540 NAD synthase DU202_00168 PF01909 Nucleotidyltransferase domain DU202_00168 PF13427 DU202_00168 DU202_00169 PF03551 Transcriptional regulator PadR-like family DU202_00170 PF12977 Domain of Unknown Function with PDB structure (DUF3861) DU202_00171 PF02678 Pirin DU202_00171 PF05726 Pirin C-terminal cupin domain DU202_00172 PF02566 OsmC-like protein DU202_00173 PF02798 Glutathione S-transferase, N-terminal domain DU202_00173 PF14497 Glutathione S-transferase, C-terminal domain DU202_00174 PF05036 Sporulation related domain DU202_00175 PF00750 tRNA synthetases class I (R) DU202_00175 PF03485 Arginyl tRNA synthetase N terminal domain DU202_00175 PF05746 DALR anticodon binding domain DU202_00176 PF00390 Malic enzyme, N-terminal domain DU202_00176 PF03949 Malic enzyme, NAD binding domain DU202_00178 PF04261 Dyp-type peroxidase family DU202_00179 PF01810 DU202_00179 DU202_00180 PF00950 DU202_00180 DU202_00181 PF00005 ABC transporter DU202_00182 PF01475 Ferric uptake regulator family DU202_00183 PF01297 Periplasmic solute binding protein family DU202_00184 PF03899 DU202_00184 DU202_00185 PF00119 ATP synthase A chain DU202_00186 PF00137 ATP synthase subunit C DU202_00187 PF00430 ATP synthase B/B' CF(0) DU202_00188 PF00213 ATP synthase delta (OSCP) subunit DU202_00189 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DU202_00189 PF00306 ATP synthase alpha/beta chain, C terminal domain DU202_00189 PF02874 ATP synthase alpha/beta family, beta-barrel domain DU202_00190 PF00231 ATP synthase DU202_00191 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DU202_00191 PF02874 ATP synthase alpha/beta family, beta-barrel domain DU202_00192 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DU202_00194 PF00255 Glutathione peroxidase DU202_00195 PF12833 Helix-turn-helix domain DU202_00196 PF07690 Major Facilitator Superfamily DU202_00197 PF00440 Bacterial regulatory proteins, tetR family DU202_00198 PF00892 EamA-like transporter family DU202_00199 PF01300 Telomere recombination DU202_00200 PF02481 DNA recombination-mediator protein A DU202_00201 PF01476 LysM domain DU202_00202 PF01609 Transposase DDE domain DU202_00203 PF01609 Transposase DDE domain DU202_00204 PF01327 Polypeptide deformylase DU202_00206 PF00593 TonB dependent receptor DU202_00206 PF07715 TonB-dependent Receptor Plug Domain DU202_00208 PF09995 DU202_00208 DU202_00209 PF00440 Bacterial regulatory proteins, tetR family DU202_00215 PF13527 Acetyltransferase (GNAT) domain DU202_00216 PF00291 Pyridoxal-phosphate dependent enzyme DU202_00217 PF01464 Transglycosylase SLT domain DU202_00218 PF03358 NADPH-dependent FMN reductase DU202_00219 PF11158 DU202_00219 DU202_00220 PF13411 MerR HTH family regulatory protein DU202_00221 PF13449 Esterase-like activity of phytase DU202_00222 PF04055 Radical SAM superfamily DU202_00222 PF08497 DU202_00222 DU202_00222 PF11842 DU202_00222 DU202_00223 PF10881 DU202_00223 DU202_00224 PF01042 Endoribonuclease L-PSP DU202_00225 PF00817 impB/mucB/samB family DU202_00225 PF11798 IMS family HHH motif DU202_00225 PF11799 impB/mucB/samB family C-terminal domain DU202_00226 PF01183 Glycosyl hydrolases family 25 DU202_00227 PF07690 Major Facilitator Superfamily DU202_00228 PF03641 Possible lysine decarboxylase DU202_00229 PF00571 CBS domain DU202_00229 PF03471 Transporter associated domain DU202_00229 PF03741 DU202_00229 DU202_00230 PF02810 SEC-C motif DU202_00231 PF03458 DU202_00231 DU202_00232 PF00083 Sugar (and other) transporter DU202_00233 PF00521 DNA gyrase/topoisomerase IV, subunit A DU202_00233 PF03989 DNA gyrase C-terminal domain, beta-propeller DU202_00234 PF00501 AMP-binding enzyme DU202_00234 PF13193 AMP-binding enzyme C-terminal domain DU202_00236 PF01124 MAPEG family DU202_00237 PF00719 Inorganic pyrophosphatase DU202_00238 PF03573 outer membrane porin, OprD family DU202_00240 PF09694 DU202_00240 DU202_00241 PF00701 Dihydrodipicolinate synthetase family DU202_00242 PF00596 Class II Aldolase and Adducin N-terminal domain DU202_00243 PF00155 Aminotransferase class I and II DU202_00243 PF00392 Bacterial regulatory proteins, gntR family DU202_00244 PF01078 Magnesium chelatase, subunit ChlI DU202_00244 PF13335 DU202_00244 DU202_00245 PF08721 TnsA endonuclease C terminal DU202_00245 PF08722 TnsA endonuclease N terminal DU202_00246 PF00665 Integrase core domain DU202_00246 PF09299 Mu transposase, C-terminal DU202_00247 PF05621 DU202_00247 DU202_00250 PF00582 Universal stress protein family DU202_00251 PF00916 DU202_00251 DU202_00251 PF01740 STAS domain DU202_00253 PF07690 Major Facilitator Superfamily DU202_00254 PF00440 Bacterial regulatory proteins, tetR family DU202_00254 PF02909 Tetracyclin repressor, C-terminal all-alpha domain DU202_00256 PF04986 DU202_00256 DU202_00256 PF14319 DU202_00256 DU202_00258 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DU202_00259 PF01636 Phosphotransferase enzyme family DU202_00261 PF01078 Magnesium chelatase, subunit ChlI DU202_00261 PF13541 Subunit ChlI of Mg-chelatase DU202_00262 PF04380 DU202_00262 DU202_00263 PF00543 Nitrogen regulatory protein P-II DU202_00264 PF00909 Ammonium Transporter Family DU202_00265 PF03477 ATP cone domain DU202_00266 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DU202_00266 PF01872 RibD C-terminal domain DU202_00267 PF02086 D12 class N6 adenine-specific DNA methyltransferase DU202_00268 PF00677 Lumazine binding domain DU202_00271 PF04364 DNA polymerase III chi subunit, HolC DU202_00272 PF00883 Cytosol aminopeptidase family, catalytic domain DU202_00272 PF02789 Cytosol aminopeptidase family, N-terminal domain DU202_00273 PF03739 DU202_00273 DU202_00274 PF03739 DU202_00274 DU202_00275 PF01676 Metalloenzyme superfamily DU202_00275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DU202_00276 PF03572 Peptidase family S41 DU202_00277 PF00072 Response regulator receiver domain DU202_00277 PF00158 Sigma-54 interaction domain DU202_00277 PF02954 Bacterial regulatory protein, Fis family DU202_00278 PF00512 His Kinase A (phospho-acceptor) domain DU202_00278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00279 PF00072 Response regulator receiver domain DU202_00279 PF00196 Bacterial regulatory proteins, luxR family DU202_00280 PF00768 D-alanyl-D-alanine carboxypeptidase DU202_00281 PF00291 Pyridoxal-phosphate dependent enzyme DU202_00282 PF00742 Homoserine dehydrogenase DU202_00282 PF01842 ACT domain DU202_00282 PF03447 Homoserine dehydrogenase, NAD binding domain DU202_00283 PF10411 Disulfide bond isomerase protein N-terminus DU202_00283 PF13098 Thioredoxin-like domain DU202_00284 PF00589 Phage integrase family DU202_00284 PF02899 Phage integrase, N-terminal SAM-like domain DU202_00286 PF04023 FeoA domain DU202_00287 PF02421 Ferrous iron transport protein B DU202_00287 PF07664 DU202_00287 DU202_00287 PF07670 Nucleoside recognition DU202_00289 PF02875 Mur ligase family, glutamate ligase domain DU202_00289 PF08245 Mur ligase middle domain DU202_00290 PF01098 DU202_00290 DU202_00291 PF00749 tRNA synthetases class I (E and Q), catalytic domain DU202_00292 PF01258 Prokaryotic dksA/traR C4-type zinc finger DU202_00293 PF00149 Calcineurin-like phosphoesterase DU202_00294 PF00293 NUDIX domain DU202_00295 PF01964 ThiC family DU202_00295 PF13667 ThiC-associated domain DU202_00297 PF00440 Bacterial regulatory proteins, tetR family DU202_00298 PF00892 EamA-like transporter family DU202_00299 PF02321 Outer membrane efflux protein DU202_00300 PF01895 PhoU domain DU202_00301 PF04362 Bacterial Fe(2+) trafficking DU202_00302 PF00206 Lyase DU202_00302 PF14698 Argininosuccinate lyase C-terminal DU202_00303 PF06580 DU202_00303 DU202_00304 PF00072 Response regulator receiver domain DU202_00304 PF04397 LytTr DNA-binding domain DU202_00305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DU202_00305 PF03900 Porphobilinogen deaminase, C-terminal domain DU202_00306 PF02602 Uroporphyrinogen-III synthase HemD DU202_00309 PF13279 Thioesterase-like superfamily DU202_00310 PF00816 H-NS histone family DU202_00311 PF01203 DU202_00311 DU202_00312 PF11356 Type IV pilus biogenesis DU202_00313 PF00263 DU202_00313 DU202_00313 PF03958 Bacterial type II/III secretion system short domain DU202_00314 PF00498 FHA domain DU202_00315 PF13419 Haloacid dehalogenase-like hydrolase DU202_00316 PF00425 chorismate binding enzyme DU202_00316 PF04715 Anthranilate synthase component I, N terminal region DU202_00321 PF00009 Elongation factor Tu GTP binding domain DU202_00321 PF03143 Elongation factor Tu C-terminal domain DU202_00321 PF03144 Elongation factor Tu domain 2 DU202_00323 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DU202_00324 PF02357 Transcription termination factor nusG DU202_00325 PF00298 Ribosomal protein L11, RNA binding domain DU202_00325 PF03946 Ribosomal protein L11, N-terminal domain DU202_00326 PF00687 Ribosomal protein L1p/L10e family DU202_00327 PF00466 Ribosomal protein L10 DU202_00328 PF00542 Ribosomal protein L7/L12 C-terminal domain DU202_00328 PF16320 DU202_00328 DU202_00329 PF00562 RNA polymerase Rpb2, domain 6 DU202_00329 PF04560 RNA polymerase Rpb2, domain 7 DU202_00329 PF04561 RNA polymerase Rpb2, domain 2 DU202_00329 PF04563 RNA polymerase beta subunit DU202_00329 PF04565 RNA polymerase Rpb2, domain 3 DU202_00329 PF10385 RNA polymerase beta subunit external 1 domain DU202_00330 PF00623 RNA polymerase Rpb1, domain 2 DU202_00330 PF04983 RNA polymerase Rpb1, domain 3 DU202_00330 PF04997 RNA polymerase Rpb1, domain 1 DU202_00330 PF04998 RNA polymerase Rpb1, domain 5 DU202_00330 PF05000 RNA polymerase Rpb1, domain 4 DU202_00332 PF13441 DU202_00332 DU202_00333 PF14539 Domain of unknown function (DUF4442) DU202_00334 PF00561 alpha/beta hydrolase fold DU202_00335 PF03553 DU202_00335 DU202_00335 PF13726 DU202_00335 DU202_00336 PF03922 OmpW family DU202_00338 PF00183 Hsp90 protein DU202_00338 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00341 PF01323 DSBA-like thioredoxin domain DU202_00343 PF13411 MerR HTH family regulatory protein DU202_00344 PF06821 Serine hydrolase DU202_00347 PF00108 Thiolase, N-terminal domain DU202_00347 PF02803 Thiolase, C-terminal domain DU202_00348 PF00378 Enoyl-CoA hydratase/isomerase family DU202_00348 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DU202_00348 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DU202_00349 PF05118 Aspartyl/Asparaginyl beta-hydroxylase DU202_00353 PF01541 GIY-YIG catalytic domain DU202_00353 PF02151 UvrB/uvrC motif DU202_00353 PF08459 UvrC Helix-hairpin-helix N-terminal DU202_00353 PF14520 Helix-hairpin-helix domain DU202_00354 PF13622 Thioesterase-like superfamily DU202_00355 PF01066 CDP-alcohol phosphatidyltransferase DU202_00356 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DU202_00356 PF12833 Helix-turn-helix domain DU202_00357 PF13532 2OG-Fe(II) oxygenase superfamily DU202_00358 PF01614 Bacterial transcriptional regulator DU202_00359 PF04632 DU202_00359 DU202_00360 PF07869 DU202_00360 DU202_00361 PF13437 HlyD family secretion protein DU202_00361 PF13533 Biotin-lipoyl like DU202_00362 PF03652 Uncharacterised protein family (UPF0081) DU202_00363 PF02622 Uncharacterized ACR, COG1678 DU202_00364 PF02463 RecF/RecN/SMC N terminal domain DU202_00366 PF06865 Protein of unknown function (DUF1255) DU202_00367 PF00588 SpoU rRNA Methylase family DU202_00367 PF08032 RNA 2'-O ribose methyltransferase substrate binding DU202_00368 PF00892 EamA-like transporter family DU202_00369 PF01121 Dephospho-CoA kinase DU202_00370 PF01478 Type IV leader peptidase family DU202_00370 PF06750 DU202_00370 DU202_00371 PF00482 Type II secretion system (T2SS), protein F DU202_00372 PF00437 Type II/IV secretion system protein DU202_00372 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DU202_00373 PF00121 Triosephosphate isomerase DU202_00374 PF03840 Preprotein translocase SecG subunit DU202_00378 PF02576 Uncharacterised BCR, YhbC family COG0779 DU202_00378 PF17384 DU202_00378 DU202_00379 PF08529 NusA N-terminal domain DU202_00379 PF13184 NusA-like KH domain DU202_00379 PF14520 Helix-hairpin-helix domain DU202_00380 PF00009 Elongation factor Tu GTP binding domain DU202_00380 PF04760 Translation initiation factor IF-2, N-terminal region DU202_00380 PF08364 DU202_00380 DU202_00380 PF11987 Translation-initiation factor 2 DU202_00381 PF02033 Ribosome-binding factor A DU202_00382 PF03334 DU202_00382 DU202_00383 PF04066 DU202_00383 DU202_00384 PF01899 DU202_00384 DU202_00385 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DU202_00386 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DU202_00387 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DU202_00387 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DU202_00387 PF04039 DU202_00387 DU202_00387 PF13244 DU202_00387 DU202_00388 PF13476 AAA domain DU202_00389 PF13245 Part of AAA domain DU202_00389 PF13361 UvrD-like helicase C-terminal domain DU202_00390 PF01502 Phosphoribosyl-AMP cyclohydrolase DU202_00390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DU202_00391 PF01494 FAD binding domain DU202_00392 PF03109 DU202_00392 DU202_00394 PF01209 ubiE/COQ5 methyltransferase family DU202_00396 PF03976 Polyphosphate kinase 2 (PPK2) DU202_00398 PF04257 Exodeoxyribonuclease V, gamma subunit DU202_00399 PF00580 UvrD/REP helicase N-terminal domain DU202_00399 PF12705 PD-(D/E)XK nuclease superfamily DU202_00399 PF13361 UvrD-like helicase C-terminal domain DU202_00400 PF13538 UvrD-like helicase C-terminal domain DU202_00400 PF13604 AAA domain DU202_00401 PF00144 Beta-lactamase DU202_00402 PF00312 Ribosomal protein S15 DU202_00403 PF00013 KH domain DU202_00403 PF00575 S1 RNA binding domain DU202_00403 PF01138 3' exoribonuclease family, domain 1 DU202_00403 PF03725 3' exoribonuclease family, domain 2 DU202_00403 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DU202_00404 PF01544 CorA-like Mg2+ transporter protein DU202_00405 PF13591 MerR HTH family regulatory protein DU202_00406 PF00226 DnaJ domain DU202_00406 PF01556 DnaJ C terminal domain DU202_00407 PF01810 DU202_00407 DU202_00408 PF01430 Hsp33 protein DU202_00409 PF00999 Sodium/hydrogen exchanger family DU202_00409 PF02254 TrkA-N domain DU202_00410 PF00271 Helicase conserved C-terminal domain DU202_00410 PF04851 Type III restriction enzyme, res subunit DU202_00411 PF00482 Type II secretion system (T2SS), protein F DU202_00412 PF07963 Prokaryotic N-terminal methylation motif DU202_00412 PF08334 Type II secretion system (T2SS), protein G DU202_00414 PF13737 DU202_00414 DU202_00416 PF01588 Putative tRNA binding domain DU202_00417 PF00795 Carbon-nitrogen hydrolase DU202_00418 PF00571 CBS domain DU202_00418 PF03471 Transporter associated domain DU202_00419 PF01206 Sulfurtransferase TusA DU202_00420 PF01946 Thi4 family DU202_00420 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase DU202_00421 PF06938 Protein of unknown function (DUF1285) DU202_00422 PF01177 Asp/Glu/Hydantoin racemase DU202_00423 PF13271 DU202_00423 DU202_00424 PF00762 Ferrochelatase DU202_00425 PF00753 Metallo-beta-lactamase superfamily DU202_00426 PF03884 Domain of unknown function (DUF329) DU202_00427 PF02390 Putative methyltransferase DU202_00428 PF03486 HI0933-like protein DU202_00429 PF04828 Glutathione-dependent formaldehyde-activating enzyme DU202_00430 PF02537 DU202_00430 DU202_00431 PF08888 HopJ type III effector protein DU202_00432 PF01197 Ribosomal protein L31 DU202_00433 PF03109 DU202_00433 DU202_00434 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_00434 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_00434 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_00435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_00436 PF01554 MatE DU202_00437 PF01609 Transposase DDE domain DU202_00438 PF13340 DU202_00438 DU202_00439 PF01554 MatE DU202_00440 PF04657 DU202_00440 DU202_00441 PF04055 Radical SAM superfamily DU202_00441 PF06969 HemN C-terminal domain DU202_00442 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_00443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00443 PF03466 LysR substrate binding domain DU202_00446 PF00501 AMP-binding enzyme DU202_00446 PF13193 AMP-binding enzyme C-terminal domain DU202_00447 PF00575 S1 RNA binding domain DU202_00447 PF10150 Ribonuclease E/G family DU202_00448 PF00849 RNA pseudouridylate synthase DU202_00448 PF01479 S4 domain DU202_00449 PF13419 Haloacid dehalogenase-like hydrolase DU202_00450 PF08279 HTH domain DU202_00450 PF13280 DU202_00450 DU202_00451 PF02798 Glutathione S-transferase, N-terminal domain DU202_00451 PF14497 Glutathione S-transferase, C-terminal domain DU202_00452 PF07077 DU202_00452 DU202_00453 PF13737 DU202_00453 DU202_00454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00454 PF03466 LysR substrate binding domain DU202_00455 PF12706 Beta-lactamase superfamily domain DU202_00456 PF00141 Peroxidase DU202_00457 PF00391 PEP-utilising enzyme, mobile domain DU202_00457 PF02896 PEP-utilising enzyme, TIM barrel domain DU202_00457 PF05524 PEP-utilising enzyme, N-terminal DU202_00457 PF13185 GAF domain DU202_00458 PF00293 NUDIX domain DU202_00459 PF12710 haloacid dehalogenase-like hydrolase DU202_00462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00462 PF03466 LysR substrate binding domain DU202_00463 PF09834 DU202_00463 DU202_00464 PF00330 Aconitase family (aconitate hydratase) DU202_00465 PF00694 Aconitase C-terminal domain DU202_00467 PF00180 Isocitrate/isopropylmalate dehydrogenase DU202_00469 PF07007 Protein of unknown function (DUF1311) DU202_00470 PF01176 Translation initiation factor 1A / IF-1 DU202_00471 PF12625 DU202_00471 DU202_00471 PF12833 Helix-turn-helix domain DU202_00472 PF01416 tRNA pseudouridine synthase DU202_00473 PF00710 Asparaginase DU202_00476 PF01118 Semialdehyde dehydrogenase, NAD binding domain DU202_00476 PF02774 Semialdehyde dehydrogenase, dimerisation domain DU202_00477 PF03372 Endonuclease/Exonuclease/phosphatase family DU202_00478 PF00375 Sodium:dicarboxylate symporter family DU202_00479 PF00534 Glycosyl transferases group 1 DU202_00479 PF13439 Glycosyltransferase Family 4 DU202_00480 PF03279 DU202_00480 DU202_00481 PF01810 DU202_00481 DU202_00482 PF00005 ABC transporter DU202_00482 PF12848 ABC transporter DU202_00482 PF16326 DU202_00482 DU202_00483 PF04102 SlyX DU202_00484 PF08240 Alcohol dehydrogenase GroES-like domain DU202_00484 PF13602 Zinc-binding dehydrogenase DU202_00485 PF01638 HxlR-like helix-turn-helix DU202_00487 PF01131 DNA topoisomerase DU202_00487 PF01396 DU202_00487 DU202_00487 PF01751 Toprim domain DU202_00487 PF08272 Topoisomerase I zinc-ribbon-like DU202_00489 PF03729 DU202_00489 DU202_00490 PF00580 UvrD/REP helicase N-terminal domain DU202_00490 PF13361 UvrD-like helicase C-terminal domain DU202_00491 PF00076 RNA recognition motif DU202_00495 PF00999 Sodium/hydrogen exchanger family DU202_00495 PF02254 TrkA-N domain DU202_00496 PF00471 Ribosomal protein L33 DU202_00497 PF00830 Ribosomal L28 family DU202_00498 PF00171 Aldehyde dehydrogenase family DU202_00499 PF00440 Bacterial regulatory proteins, tetR family DU202_00499 PF13972 Bacterial transcriptional repressor DU202_00500 PF00551 Formyl transferase DU202_00500 PF01842 ACT domain DU202_00501 PF03544 Gram-negative bacterial TonB protein C-terminal DU202_00502 PF01618 DU202_00502 DU202_00503 PF02472 Biopolymer transport protein ExbD/TolR DU202_00504 PF01625 Peptide methionine sulfoxide reductase DU202_00505 PF13387 DU202_00505 DU202_00506 PF00186 Dihydrofolate reductase DU202_00507 PF00303 Thymidylate synthase DU202_00510 PF01790 DU202_00510 DU202_00511 PF05742 DU202_00511 DU202_00512 PF05787 Bacterial protein of unknown function (DUF839) DU202_00513 PF05787 Bacterial protein of unknown function (DUF839) DU202_00514 PF00902 Sec-independent protein translocase protein (TatC) DU202_00515 PF02416 mttA/Hcf106 family DU202_00516 PF02416 mttA/Hcf106 family DU202_00518 PF01725 Ham1 family DU202_00519 PF08238 Sel1 repeat DU202_00520 PF07021 Methionine biosynthesis protein MetW DU202_00521 PF00561 alpha/beta hydrolase fold DU202_00522 PF00682 HMGL-like DU202_00522 PF08502 LeuA allosteric (dimerisation) domain DU202_00523 PF13640 2OG-Fe(II) oxygenase superfamily DU202_00524 PF00593 TonB dependent receptor DU202_00524 PF07715 TonB-dependent Receptor Plug Domain DU202_00525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_00525 PF05697 Bacterial trigger factor protein (TF) DU202_00525 PF05698 Bacterial trigger factor protein (TF) C-terminus DU202_00526 PF00574 Clp protease DU202_00527 PF06689 ClpX C4-type zinc finger DU202_00527 PF07724 AAA domain (Cdc48 subfamily) DU202_00527 PF10431 C-terminal, D2-small domain, of ClpB protein DU202_00528 PF11008 DU202_00528 DU202_00529 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) DU202_00530 PF05681 DU202_00530 DU202_00530 PF05683 Fumarase C-terminus DU202_00531 PF01515 Phosphate acetyl/butaryl transferase DU202_00531 PF07085 DRTGG domain DU202_00531 PF13500 AAA domain DU202_00532 PF00871 Acetokinase family DU202_00533 PF00920 Dehydratase family DU202_00534 PF01081 KDPG and KHG aldolase DU202_00535 PF02447 DU202_00535 DU202_00536 PF01202 Shikimate kinase DU202_00537 PF00171 Aldehyde dehydrogenase family DU202_00538 PF00171 Aldehyde dehydrogenase family DU202_00539 PF00561 alpha/beta hydrolase fold DU202_00540 PF04072 Leucine carboxyl methyltransferase DU202_00541 PF00933 Glycosyl hydrolase family 3 N terminal domain DU202_00542 PF00595 PDZ domain (Also known as DHR or GLGF) DU202_00542 PF03572 Peptidase family S41 DU202_00542 PF11818 DU202_00542 DU202_00543 PF00534 Glycosyl transferases group 1 DU202_00543 PF13439 Glycosyltransferase Family 4 DU202_00544 PF01569 PAP2 superfamily DU202_00545 PF04384 Iron-sulphur cluster assembly DU202_00546 PF00334 Nucleoside diphosphate kinase DU202_00547 PF04055 Radical SAM superfamily DU202_00548 PF13432 Tetratricopeptide repeat DU202_00549 PF13413 Helix-turn-helix domain DU202_00549 PF13464 DU202_00549 DU202_00550 PF04551 GcpE protein DU202_00551 PF03129 Anticodon binding domain DU202_00551 PF13393 Histidyl-tRNA synthetase DU202_00552 PF09976 Tetratricopeptide repeat DU202_00553 PF13360 PQQ-like domain DU202_00554 PF01926 50S ribosome-binding GTPase DU202_00554 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DU202_00555 PF13723 DU202_00555 DU202_00556 PF01553 Acyltransferase DU202_00557 PF00550 Phosphopantetheine attachment site DU202_00558 PF00550 Phosphopantetheine attachment site DU202_00559 PF04279 DU202_00559 DU202_00560 PF00501 AMP-binding enzyme DU202_00560 PF13193 AMP-binding enzyme C-terminal domain DU202_00561 PF00535 Glycosyl transferase family 2 DU202_00562 PF03279 DU202_00562 DU202_00563 PF00221 Aromatic amino acid lyase DU202_00564 PF13279 Thioesterase-like superfamily DU202_00565 PF03548 Outer membrane lipoprotein carrier protein LolA DU202_00567 PF01494 FAD binding domain DU202_00568 PF11659 DU202_00568 DU202_00569 PF00109 Beta-ketoacyl synthase, N-terminal domain DU202_00569 PF02801 Beta-ketoacyl synthase, C-terminal domain DU202_00571 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_00572 PF00109 Beta-ketoacyl synthase, N-terminal domain DU202_00572 PF02801 Beta-ketoacyl synthase, C-terminal domain DU202_00574 PF01648 4'-phosphopantetheinyl transferase superfamily DU202_00575 PF02556 Preprotein translocase subunit SecB DU202_00576 PF00462 Glutaredoxin DU202_00577 PF00581 Rhodanese-like domain DU202_00578 PF03193 Protein of unknown function, DUF258 DU202_00579 PF00929 Exonuclease DU202_00580 PF12811 DU202_00580 DU202_00581 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_00582 PF02321 Outer membrane efflux protein DU202_00583 PF00005 ABC transporter DU202_00583 PF02687 DU202_00583 DU202_00583 PF12704 MacB-like periplasmic core domain DU202_00584 PF16576 DU202_00584 DU202_00585 PF06144 DNA polymerase III, delta subunit DU202_00587 PF00133 tRNA synthetases class I (I, L, M and V) DU202_00587 PF08264 Anticodon-binding domain of tRNA DU202_00587 PF09334 tRNA synthetases class I (M) DU202_00587 PF13603 Leucyl-tRNA synthetase, Domain 2 DU202_00588 PF13511 DU202_00588 DU202_00589 PF00205 Thiamine pyrophosphate enzyme, central domain DU202_00589 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DU202_00589 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DU202_00590 PF10369 Small subunit of acetolactate synthase DU202_00590 PF13710 ACT domain DU202_00591 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DU202_00591 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain DU202_00593 PF00563 EAL domain DU202_00593 PF00990 GGDEF domain DU202_00594 PF00440 Bacterial regulatory proteins, tetR family DU202_00595 PF00440 Bacterial regulatory proteins, tetR family DU202_00596 PF13737 DU202_00596 DU202_00598 PF00009 Elongation factor Tu GTP binding domain DU202_00598 PF16658 DU202_00598 DU202_00600 PF11738 Protein of unknown function (DUF3298) DU202_00601 PF01026 TatD related DNase DU202_00602 PF00330 Aconitase family (aconitate hydratase) DU202_00602 PF00694 Aconitase C-terminal domain DU202_00603 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease DU202_00604 PF00899 ThiF family DU202_00605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00605 PF03466 LysR substrate binding domain DU202_00607 PF01207 Dihydrouridine synthase (Dus) DU202_00608 PF01609 Transposase DDE domain DU202_00609 PF13340 DU202_00609 DU202_00610 PF07690 Major Facilitator Superfamily DU202_00611 PF01042 Endoribonuclease L-PSP DU202_00612 PF00892 EamA-like transporter family DU202_00613 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DU202_00613 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DU202_00614 PF12769 Domain of unknown function (DUF3814) DU202_00615 PF02233 NAD(P) transhydrogenase beta subunit DU202_00616 PF00106 short chain dehydrogenase DU202_00617 PF02410 Oligomerisation domain DU202_00618 PF01261 Xylose isomerase-like TIM barrel DU202_00619 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DU202_00619 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DU202_00620 PF00378 Enoyl-CoA hydratase/isomerase family DU202_00621 PF00072 Response regulator receiver domain DU202_00621 PF00512 His Kinase A (phospho-acceptor) domain DU202_00621 PF01627 Hpt domain DU202_00621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00622 PF00291 Pyridoxal-phosphate dependent enzyme DU202_00623 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DU202_00624 PF05958 tRNA (Uracil-5-)-methyltransferase DU202_00625 PF02824 TGS domain DU202_00625 PF04607 Region found in RelA / SpoT proteins DU202_00625 PF13291 ACT domain DU202_00625 PF13328 HD domain DU202_00626 PF00106 short chain dehydrogenase DU202_00627 PF03819 MazG nucleotide pyrophosphohydrolase domain DU202_00628 PF12836 Helix-hairpin-helix motif DU202_00629 PF01743 Poly A polymerase head domain DU202_00629 PF12626 Polymerase A arginine-rich C-terminus DU202_00629 PF12627 Probable RNA and SrmB- binding site of polymerase A DU202_00630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DU202_00631 PF02548 Ketopantoate hydroxymethyltransferase DU202_00632 PF02569 Pantoate-beta-alanine ligase DU202_00633 PF03668 DU202_00633 DU202_00634 PF00381 PTS HPr component phosphorylation site DU202_00635 PF04751 Protein of unknown function (DUF615) DU202_00636 PF00501 AMP-binding enzyme DU202_00636 PF13193 AMP-binding enzyme C-terminal domain DU202_00637 PF02824 TGS domain DU202_00638 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DU202_00638 PF03129 Anticodon binding domain DU202_00638 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DU202_00639 PF00707 Translation initiation factor IF-3, C-terminal domain DU202_00640 PF00043 Glutathione S-transferase, C-terminal domain DU202_00640 PF02798 Glutathione S-transferase, N-terminal domain DU202_00641 PF09335 DU202_00641 DU202_00642 PF05977 Transmembrane secretion effector DU202_00643 PF01632 Ribosomal protein L35 DU202_00644 PF00453 Ribosomal protein L20 DU202_00645 PF08719 Domain of unknown function (DUF1768) DU202_00646 PF00583 Acetyltransferase (GNAT) family DU202_00648 PF01409 tRNA synthetases class II core domain (F) DU202_00648 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DU202_00649 PF01588 Putative tRNA binding domain DU202_00649 PF03147 Ferredoxin-fold anticodon binding domain DU202_00649 PF03483 B3/4 domain DU202_00649 PF03484 tRNA synthetase B5 domain DU202_00650 PF00216 Bacterial DNA-binding protein DU202_00652 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DU202_00652 PF07497 Rho termination factor, RNA-binding domain DU202_00652 PF07498 Rho termination factor, N-terminal domain DU202_00653 PF00085 Thioredoxin DU202_00654 PF01966 HD domain DU202_00654 PF02541 Ppx/GppA phosphatase family DU202_00655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DU202_00656 PF01171 PP-loop family DU202_00656 PF09179 TilS substrate binding domain DU202_00656 PF11734 TilS substrate C-terminal domain DU202_00657 PF03807 NADP oxidoreductase coenzyme F420-dependent DU202_00657 PF14748 Pyrroline-5-carboxylate reductase dimerisation DU202_00658 PF02325 DU202_00658 DU202_00659 PF00476 DNA polymerase family A DU202_00659 PF01367 5'-3' exonuclease, C-terminal SAM fold DU202_00659 PF01612 3'-5' exonuclease DU202_00659 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DU202_00660 PF10101 DU202_00660 DU202_00661 PF00924 Mechanosensitive ion channel DU202_00663 PF00437 Type II/IV secretion system protein DU202_00664 PF02566 OsmC-like protein DU202_00665 PF01047 MarR family DU202_00666 PF16309 DU202_00666 DU202_00667 PF00795 Carbon-nitrogen hydrolase DU202_00668 PF01740 STAS domain DU202_00669 PF07228 Stage II sporulation protein E (SpoIIE) DU202_00670 PF04333 DU202_00670 DU202_00676 PF00309 DU202_00676 DU202_00676 PF04552 Sigma-54, DNA binding domain DU202_00676 PF04963 Sigma-54 factor, core binding domain DU202_00677 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DU202_00678 PF01722 BolA-like protein DU202_00679 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DU202_00680 PF01634 ATP phosphoribosyltransferase DU202_00681 PF00815 Histidinol dehydrogenase DU202_00682 PF00155 Aminotransferase class I and II DU202_00683 PF00425 chorismate binding enzyme DU202_00683 PF04715 Anthranilate synthase component I, N terminal region DU202_00685 PF13737 DU202_00685 DU202_00686 PF03412 Peptidase C39 family DU202_00688 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DU202_00691 PF00293 NUDIX domain DU202_00691 PF14803 Nudix N-terminal DU202_00692 PF00293 NUDIX domain DU202_00693 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_00694 PF00814 Glycoprotease family DU202_00695 PF04445 Putative SAM-dependent methyltransferase DU202_00697 PF01609 Transposase DDE domain DU202_00698 PF13340 DU202_00698 DU202_00699 PF01650 Peptidase C13 family DU202_00700 PF00756 Putative esterase DU202_00701 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) DU202_00702 PF00834 Ribulose-phosphate 3 epimerase family DU202_00703 PF13340 DU202_00703 DU202_00704 PF01609 Transposase DDE domain DU202_00705 PF08282 haloacid dehalogenase-like hydrolase DU202_00707 PF00394 Multicopper oxidase DU202_00707 PF07731 Multicopper oxidase DU202_00707 PF07732 Multicopper oxidase DU202_00708 PF05275 DU202_00708 DU202_00709 PF01545 Cation efflux family DU202_00710 PF00893 Small Multidrug Resistance protein DU202_00711 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DU202_00711 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DU202_00712 PF01960 ArgJ family DU202_00713 PF02445 Quinolinate synthetase A protein DU202_00718 PF00962 Adenosine/AMP deaminase DU202_00719 PF00107 Zinc-binding dehydrogenase DU202_00719 PF08240 Alcohol dehydrogenase GroES-like domain DU202_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00720 PF03466 LysR substrate binding domain DU202_00721 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_00721 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_00721 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_00722 PF07690 Major Facilitator Superfamily DU202_00723 PF02515 CoA-transferase family III DU202_00725 PF00890 FAD binding domain DU202_00726 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00726 PF03466 LysR substrate binding domain DU202_00727 PF13531 Bacterial extracellular solute-binding protein DU202_00728 PF07690 Major Facilitator Superfamily DU202_00729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00729 PF03466 LysR substrate binding domain DU202_00731 PF01546 Peptidase family M20/M25/M40 DU202_00731 PF07687 Peptidase dimerisation domain DU202_00732 PF12625 DU202_00732 DU202_00732 PF12833 Helix-turn-helix domain DU202_00734 PF01810 DU202_00734 DU202_00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00735 PF03466 LysR substrate binding domain DU202_00736 PF08908 DU202_00736 DU202_00737 PF01717 Cobalamin-independent synthase, Catalytic domain DU202_00738 PF01613 Flavin reductase like domain DU202_00739 PF00440 Bacterial regulatory proteins, tetR family DU202_00740 PF04471 Restriction endonuclease DU202_00740 PF13401 AAA domain DU202_00742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00742 PF03466 LysR substrate binding domain DU202_00743 PF02567 Phenazine biosynthesis-like protein DU202_00746 PF13737 DU202_00746 DU202_00748 PF01011 PQQ enzyme repeat DU202_00748 PF13360 PQQ-like domain DU202_00752 PF13737 DU202_00752 DU202_00754 PF06527 DU202_00754 DU202_00755 PF05621 DU202_00755 DU202_00756 PF01609 Transposase DDE domain DU202_00757 PF13340 DU202_00757 DU202_00759 PF00665 Integrase core domain DU202_00759 PF09299 Mu transposase, C-terminal DU202_00760 PF08722 TnsA endonuclease N terminal DU202_00762 PF13182 DU202_00762 DU202_00764 PF01507 Phosphoadenosine phosphosulfate reductase family DU202_00766 PF01609 Transposase DDE domain DU202_00767 PF13340 DU202_00767 DU202_00769 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00770 PF13737 DU202_00770 DU202_00771 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00772 PF00268 Ribonucleotide reductase, small chain DU202_00774 PF00317 Ribonucleotide reductase, all-alpha domain DU202_00774 PF02867 Ribonucleotide reductase, barrel domain DU202_00774 PF03477 ATP cone domain DU202_00775 PF00072 Response regulator receiver domain DU202_00775 PF00486 Transcriptional regulatory protein, C terminal DU202_00776 PF00512 His Kinase A (phospho-acceptor) domain DU202_00776 PF00672 HAMP domain DU202_00776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_00778 PF00990 GGDEF domain DU202_00779 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DU202_00780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DU202_00781 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DU202_00781 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DU202_00782 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin DU202_00783 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DU202_00783 PF10531 SLBB domain DU202_00783 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DU202_00784 PF00384 Molybdopterin oxidoreductase DU202_00784 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DU202_00784 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DU202_00784 PF13510 2Fe-2S iron-sulfur cluster binding domain DU202_00785 PF00146 NADH dehydrogenase DU202_00786 PF12838 4Fe-4S dicluster domain DU202_00787 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DU202_00788 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DU202_00789 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DU202_00789 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DU202_00790 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DU202_00791 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DU202_00792 PF14681 Uracil phosphoribosyltransferase DU202_00793 PF00313 'Cold-shock' DNA-binding domain DU202_00794 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00794 PF03466 LysR substrate binding domain DU202_00795 PF00175 Oxidoreductase NAD-binding domain DU202_00795 PF00970 Oxidoreductase FAD-binding domain DU202_00798 PF05552 Conserved TM helix DU202_00800 PF03486 HI0933-like protein DU202_00801 PF00291 Pyridoxal-phosphate dependent enzyme DU202_00802 PF13437 HlyD family secretion protein DU202_00802 PF13533 Biotin-lipoyl like DU202_00803 PF07690 Major Facilitator Superfamily DU202_00804 PF00440 Bacterial regulatory proteins, tetR family DU202_00805 PF01810 DU202_00805 DU202_00807 PF01588 Putative tRNA binding domain DU202_00807 PF08264 Anticodon-binding domain of tRNA DU202_00807 PF09334 tRNA synthetases class I (M) DU202_00809 PF10609 ParA/MinD ATPase like DU202_00810 PF01048 Phosphorylase superfamily DU202_00811 PF09835 DU202_00811 DU202_00812 PF01810 DU202_00812 DU202_00813 PF00692 dUTPase DU202_00819 PF01207 Dihydrouridine synthase (Dus) DU202_00820 PF01578 DU202_00820 DU202_00821 PF00448 SRP54-type protein, GTPase domain DU202_00821 PF02881 SRP54-type protein, helical bundle domain DU202_00821 PF02978 Signal peptide binding domain DU202_00822 PF03309 Type III pantothenate kinase DU202_00823 PF02237 Biotin protein ligase C terminal domain DU202_00824 PF03099 Biotin/lipoate A/B protein ligase family DU202_00825 PF01925 DU202_00825 DU202_00826 PF00392 Bacterial regulatory proteins, gntR family DU202_00826 PF07729 FCD domain DU202_00827 PF02463 RecF/RecN/SMC N terminal domain DU202_00828 PF04354 ZipA, C-terminal FtsZ-binding domain DU202_00829 PF00533 BRCA1 C Terminus (BRCT) domain DU202_00829 PF01653 NAD-dependent DNA ligase adenylation domain DU202_00829 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DU202_00829 PF03120 NAD-dependent DNA ligase OB-fold domain DU202_00829 PF12826 Helix-hairpin-helix motif DU202_00829 PF14520 Helix-hairpin-helix domain DU202_00830 PF00210 Ferritin-like domain DU202_00831 PF07690 Major Facilitator Superfamily DU202_00832 PF00982 Glycosyltransferase family 20 DU202_00833 PF13737 DU202_00833 DU202_00834 PF02358 Trehalose-phosphatase DU202_00836 PF00202 Aminotransferase class-III DU202_00837 PF00155 Aminotransferase class I and II DU202_00838 PF13489 Methyltransferase domain DU202_00839 PF13500 AAA domain DU202_00840 PF00849 RNA pseudouridylate synthase DU202_00840 PF01479 S4 domain DU202_00841 PF04079 Putative transcriptional regulators (Ypuh-like) DU202_00842 PF02616 ScpA/B protein DU202_00843 PF01300 Telomere recombination DU202_00844 PF04315 DU202_00844 DU202_00845 PF02620 DU202_00845 DU202_00846 PF01783 Ribosomal L32p protein family DU202_00847 PF00698 Acyl transferase domain DU202_00848 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_00849 PF00550 Phosphopantetheine attachment site DU202_00850 PF01476 LysM domain DU202_00850 PF04972 BON domain DU202_00851 PF08543 Phosphomethylpyrimidine kinase DU202_00852 PF13419 Haloacid dehalogenase-like hydrolase DU202_00853 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DU202_00854 PF09925 DU202_00854 DU202_00854 PF14351 DU202_00854 DU202_00855 PF14345 DU202_00855 DU202_00856 PF02261 Aspartate decarboxylase DU202_00857 PF01195 Peptidyl-tRNA hydrolase DU202_00858 PF01386 Ribosomal L25p family DU202_00859 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DU202_00859 PF14572 Phosphoribosyl synthetase-associated domain DU202_00864 PF03550 Outer membrane lipoprotein LolB DU202_00865 PF13181 Tetratricopeptide repeat DU202_00865 PF14559 Tetratricopeptide repeat DU202_00866 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DU202_00866 PF01488 Shikimate / quinate 5-dehydrogenase DU202_00866 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DU202_00867 PF01807 CHC2 zinc finger DU202_00867 PF08275 DNA primase catalytic core, N-terminal domain DU202_00867 PF10410 DnaB-helicase binding domain of primase DU202_00867 PF13662 Toprim domain DU202_00868 PF13525 Outer membrane lipoprotein DU202_00869 PF00849 RNA pseudouridylate synthase DU202_00869 PF01479 S4 domain DU202_00870 PF02578 Multi-copper polyphenol oxidoreductase laccase DU202_00871 PF03358 NADPH-dependent FMN reductase DU202_00872 PF01668 SmpB protein DU202_00873 PF01467 Cytidylyltransferase DU202_00874 PF00037 4Fe-4S binding domain DU202_00876 PF07396 Phosphate-selective porin O and P DU202_00877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_00877 PF03466 LysR substrate binding domain DU202_00878 PF00180 Isocitrate/isopropylmalate dehydrogenase DU202_00879 PF02028 BCCT family transporter DU202_00881 PF07859 alpha/beta hydrolase fold DU202_00882 PF00355 Rieske [2Fe-2S] domain DU202_00882 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DU202_00883 PF00171 Aldehyde dehydrogenase family DU202_00884 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_00884 PF00175 Oxidoreductase NAD-binding domain DU202_00884 PF00970 Oxidoreductase FAD-binding domain DU202_00887 PF00795 Carbon-nitrogen hydrolase DU202_00887 PF02540 NAD synthase DU202_00889 PF02678 Pirin DU202_00889 PF05726 Pirin C-terminal cupin domain DU202_00890 PF03653 DU202_00890 DU202_00891 PF00109 Beta-ketoacyl synthase, N-terminal domain DU202_00891 PF02801 Beta-ketoacyl synthase, C-terminal domain DU202_00892 PF12787 DU202_00892 DU202_00893 PF00164 Ribosomal protein S12/S23 DU202_00894 PF00177 Ribosomal protein S7p/S5e DU202_00895 PF00009 Elongation factor Tu GTP binding domain DU202_00895 PF00679 Elongation factor G C-terminus DU202_00895 PF03144 Elongation factor Tu domain 2 DU202_00895 PF03764 Elongation factor G, domain IV DU202_00895 PF14492 Elongation Factor G, domain II DU202_00896 PF00009 Elongation factor Tu GTP binding domain DU202_00896 PF03143 Elongation factor Tu C-terminal domain DU202_00896 PF03144 Elongation factor Tu domain 2 DU202_00897 PF10118 DU202_00897 DU202_00898 PF10118 DU202_00898 DU202_00899 PF00583 Acetyltransferase (GNAT) family DU202_00900 PF04376 DU202_00900 DU202_00900 PF04377 DU202_00900 DU202_00901 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DU202_00902 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_00903 PF01580 FtsK/SpoIIIE family DU202_00903 PF09397 Ftsk gamma domain DU202_00903 PF13491 DU202_00903 DU202_00904 PF01810 DU202_00904 DU202_00908 PF03776 Septum formation topological specificity factor MinE DU202_00909 PF13614 AAA domain DU202_00910 PF03775 Septum formation inhibitor MinC, C-terminal domain DU202_00912 PF01553 Acyltransferase DU202_00913 PF00691 OmpA family DU202_00914 PF00580 UvrD/REP helicase N-terminal domain DU202_00914 PF13361 UvrD-like helicase C-terminal domain DU202_00915 PF00692 dUTPase DU202_00916 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DU202_00916 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DU202_00916 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DU202_00917 PF00696 Amino acid kinase family DU202_00918 PF13444 Acetyltransferase (GNAT) domain DU202_00919 PF13230 Glutamine amidotransferases class-II DU202_00920 PF13737 DU202_00920 DU202_00921 PF13230 Glutamine amidotransferases class-II DU202_00922 PF01814 Hemerythrin HHE cation binding domain DU202_00924 PF03658 RnfH family Ubiquitin DU202_00925 PF04355 SmpA / OmlA family DU202_00926 PF01475 Ferric uptake regulator family DU202_00927 PF00437 Type II/IV secretion system protein DU202_00928 PF00437 Type II/IV secretion system protein DU202_00929 PF01168 Alanine racemase, N-terminal domain DU202_00930 PF13476 AAA domain DU202_00930 PF13558 Putative exonuclease SbcCD, C subunit DU202_00931 PF00149 Calcineurin-like phosphoesterase DU202_00931 PF12320 Type 5 capsule protein repressor C-terminal domain DU202_00932 PF02566 OsmC-like protein DU202_00935 PF01370 NAD dependent epimerase/dehydratase family DU202_00935 PF08338 Domain of unknown function (DUF1731) DU202_00936 PF01266 FAD dependent oxidoreductase DU202_00937 PF00490 Delta-aminolevulinic acid dehydratase DU202_00938 PF03061 Thioesterase superfamily DU202_00939 PF00529 HlyD family secretion protein DU202_00939 PF16576 DU202_00939 DU202_00940 PF07690 Major Facilitator Superfamily DU202_00941 PF01019 Gamma-glutamyltranspeptidase DU202_00943 PF00589 Phage integrase family DU202_00943 PF13356 Domain of unknown function (DUF4102) DU202_00947 PF13340 DU202_00947 DU202_00948 PF01609 Transposase DDE domain DU202_00954 PF10065 DU202_00954 DU202_00957 PF00717 Peptidase S24-like DU202_00957 PF01381 Helix-turn-helix DU202_00958 PF01381 Helix-turn-helix DU202_00964 PF00145 C-5 cytosine-specific DNA methylase DU202_00965 PF01555 DNA methylase DU202_00966 PF07120 DU202_00966 DU202_00971 PF01555 DNA methylase DU202_00973 PF01695 IstB-like ATP binding protein DU202_00981 PF00872 DU202_00981 DU202_00982 PF05866 Endodeoxyribonuclease RusA DU202_00983 PF12844 Helix-turn-helix domain DU202_00988 PF15919 DU202_00988 DU202_00989 PF10547 DU202_00989 DU202_01000 PF01258 Prokaryotic dksA/traR C4-type zinc finger DU202_01003 PF12571 DU202_01003 DU202_01015 PF10547 DU202_01015 DU202_01017 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DU202_01018 PF05016 Plasmid stabilisation system protein DU202_01022 PF02018 Carbohydrate binding domain DU202_01022 PF09327 DU202_01022 DU202_01022 PF15711 DU202_01022 DU202_01031 PF01381 Helix-turn-helix DU202_01031 PF06114 Domain of unknown function (DUF955) DU202_01033 PF10547 DU202_01033 DU202_01038 PF16082 DU202_01038 DU202_01042 PF00817 impB/mucB/samB family DU202_01042 PF11799 impB/mucB/samB family C-terminal domain DU202_01043 PF00717 Peptidase S24-like DU202_01044 PF02586 Uncharacterised ACR, COG2135 DU202_01046 PF13175 AAA ATPase domain DU202_01047 PF13737 DU202_01047 DU202_01049 PF02086 D12 class N6 adenine-specific DNA methyltransferase DU202_01053 PF03573 outer membrane porin, OprD family DU202_01054 PF00083 Sugar (and other) transporter DU202_01055 PF00701 Dihydrodipicolinate synthetase family DU202_01056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01056 PF03466 LysR substrate binding domain DU202_01058 PF06912 DU202_01058 DU202_01059 PF12697 Alpha/beta hydrolase family DU202_01060 PF13520 Amino acid permease DU202_01061 PF02574 Homocysteine S-methyltransferase DU202_01063 PF06039 DU202_01063 DU202_01064 PF00732 GMC oxidoreductase DU202_01064 PF05199 GMC oxidoreductase DU202_01065 PF00171 Aldehyde dehydrogenase family DU202_01066 PF00440 Bacterial regulatory proteins, tetR family DU202_01066 PF13977 Bacterial transcriptional repressor DU202_01067 PF02028 BCCT family transporter DU202_01068 PF02028 BCCT family transporter DU202_01069 PF01914 DU202_01069 DU202_01070 PF03061 Thioesterase superfamily DU202_01072 PF02492 CobW/HypB/UreG, nucleotide-binding domain DU202_01073 PF00375 Sodium:dicarboxylate symporter family DU202_01074 PF13737 DU202_01074 DU202_01075 PF00375 Sodium:dicarboxylate symporter family DU202_01076 PF07152 YaeQ protein DU202_01077 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_01078 PF01522 Polysaccharide deacetylase DU202_01078 PF14883 Hypothetical glycosyl hydrolase family 13 DU202_01079 PF13641 Glycosyltransferase like family 2 DU202_01080 PF13994 DU202_01080 DU202_01081 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01082 PF13737 DU202_01082 DU202_01083 PF04973 DU202_01083 DU202_01085 PF01614 Bacterial transcriptional regulator DU202_01085 PF09339 IclR helix-turn-helix domain DU202_01086 PF00355 Rieske [2Fe-2S] domain DU202_01088 PF00355 Rieske [2Fe-2S] domain DU202_01089 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_01090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DU202_01091 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01091 PF14759 Reductase C-terminal DU202_01092 PF07690 Major Facilitator Superfamily DU202_01093 PF07883 Cupin domain DU202_01094 PF12697 Alpha/beta hydrolase family DU202_01095 PF00106 short chain dehydrogenase DU202_01096 PF01958 Domain of unknown function DUF108 DU202_01096 PF03447 Homoserine dehydrogenase, NAD binding domain DU202_01097 PF00171 Aldehyde dehydrogenase family DU202_01098 PF00205 Thiamine pyrophosphate enzyme, central domain DU202_01098 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DU202_01098 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DU202_01100 PF07690 Major Facilitator Superfamily DU202_01101 PF01327 Polypeptide deformylase DU202_01102 PF04960 Glutaminase DU202_01103 PF12833 Helix-turn-helix domain DU202_01104 PF07690 Major Facilitator Superfamily DU202_01105 PF01263 Aldose 1-epimerase DU202_01107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01107 PF03466 LysR substrate binding domain DU202_01108 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_01109 PF07690 Major Facilitator Superfamily DU202_01110 PF00456 Transketolase, thiamine diphosphate binding domain DU202_01111 PF02779 Transketolase, pyrimidine binding domain DU202_01111 PF02780 Transketolase, C-terminal domain DU202_01112 PF00809 Pterin binding enzyme DU202_01112 PF02310 B12 binding domain DU202_01112 PF02574 Homocysteine S-methyltransferase DU202_01112 PF02607 B12 binding domain DU202_01112 PF02965 Vitamin B12 dependent methionine synthase, activation domain DU202_01113 PF01384 DU202_01113 DU202_01114 PF00291 Pyridoxal-phosphate dependent enzyme DU202_01117 PF03781 Sulfatase-modifying factor enzyme 1 DU202_01118 PF00884 Sulfatase DU202_01119 PF01694 Rhomboid family DU202_01120 PF01106 NifU-like domain DU202_01120 PF01521 Iron-sulphur cluster biosynthesis DU202_01121 PF00593 TonB dependent receptor DU202_01121 PF07715 TonB-dependent Receptor Plug Domain DU202_01123 PF12697 Alpha/beta hydrolase family DU202_01124 PF13737 DU202_01124 DU202_01125 PF00484 Carbonic anhydrase DU202_01126 PF13472 GDSL-like Lipase/Acylhydrolase family DU202_01127 PF00005 ABC transporter DU202_01128 PF02687 DU202_01128 DU202_01129 PF01694 Rhomboid family DU202_01130 PF00912 Transglycosylase DU202_01131 PF02503 Polyphosphate kinase middle domain DU202_01131 PF13089 Polyphosphate kinase N-terminal domain DU202_01131 PF13090 Polyphosphate kinase C-terminal domain DU202_01132 PF05036 Sporulation related domain DU202_01133 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01133 PF03466 LysR substrate binding domain DU202_01134 PF00561 alpha/beta hydrolase fold DU202_01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01136 PF00301 Rubredoxin DU202_01137 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DU202_01138 PF05728 Uncharacterised protein family (UPF0227) DU202_01139 PF00152 tRNA synthetases class II (D, K and N) DU202_01139 PF01336 OB-fold nucleic acid binding domain DU202_01140 PF14052 Capsule assembly protein Wzi DU202_01142 PF01507 Phosphoadenosine phosphosulfate reductase family DU202_01143 PF00009 Elongation factor Tu GTP binding domain DU202_01144 PF09998 DU202_01144 DU202_01146 PF03600 Citrate transporter DU202_01147 PF00571 CBS domain DU202_01147 PF01595 DU202_01147 DU202_01147 PF03471 Transporter associated domain DU202_01148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01148 PF03466 LysR substrate binding domain DU202_01149 PF00463 Isocitrate lyase family DU202_01150 PF04170 NlpE N-terminal domain DU202_01152 PF01774 UreD urease accessory protein DU202_01153 PF00547 Urease, gamma subunit DU202_01154 PF00699 Urease beta subunit DU202_01155 PF00449 Urease alpha-subunit, N-terminal domain DU202_01155 PF01979 Amidohydrolase family DU202_01156 PF01979 Amidohydrolase family DU202_01157 PF02814 UreE urease accessory protein, N-terminal domain DU202_01157 PF05194 UreE urease accessory protein, C-terminal domain DU202_01158 PF01730 UreF DU202_01159 PF02492 CobW/HypB/UreG, nucleotide-binding domain DU202_01160 PF04955 DU202_01160 DU202_01161 PF03602 Conserved hypothetical protein 95 DU202_01162 PF00905 Penicillin binding protein transpeptidase domain DU202_01162 PF03717 Penicillin-binding Protein dimerisation domain DU202_01165 PF00406 Adenylate kinase DU202_01165 PF05191 Adenylate kinase, active site lid DU202_01166 PF00633 Helix-hairpin-helix motif DU202_01166 PF00730 HhH-GPD superfamily base excision DNA repair protein DU202_01166 PF10576 Iron-sulfur binding domain of endonuclease III DU202_01167 PF04060 Putative Fe-S cluster DU202_01167 PF14697 4Fe-4S dicluster domain DU202_01168 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DU202_01168 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DU202_01169 PF03724 META domain DU202_01169 PF14302 DU202_01169 DU202_01170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DU202_01171 PF02590 Predicted SPOUT methyltransferase DU202_01172 PF00004 ATPase family associated with various cellular activities (AAA) DU202_01172 PF02190 ATP-dependent protease La (LON) domain DU202_01172 PF05362 Lon protease (S16) C-terminal proteolytic domain DU202_01173 PF03895 YadA-like C-terminal region DU202_01173 PF05658 Head domain of trimeric autotransporter adhesin DU202_01173 PF05662 Coiled stalk of trimeric autotransporter adhesin DU202_01173 PF13018 DU202_01173 DU202_01174 PF00691 OmpA family DU202_01174 PF04355 SmpA / OmlA family DU202_01175 PF01812 5-formyltetrahydrofolate cyclo-ligase family DU202_01176 PF01609 Transposase DDE domain DU202_01177 PF01609 Transposase DDE domain DU202_01186 PF13479 DU202_01186 DU202_01195 PF00717 Peptidase S24-like DU202_01195 PF01381 Helix-turn-helix DU202_01199 PF04492 DU202_01199 DU202_01203 PF04480 Protein of unknown function (DUF559) DU202_01214 PF10045 DU202_01214 DU202_01215 PF03237 Terminase-like family DU202_01215 PF17289 DU202_01215 DU202_01216 PF13264 DU202_01216 DU202_01217 PF04233 DU202_01217 DU202_01220 PF13876 DU202_01220 DU202_01223 PF12949 HeH/LEM domain DU202_01230 PF13554 Bacteriophage related domain of unknown function DU202_01232 PF08239 Bacterial SH3 domain DU202_01237 PF14076 DU202_01237 DU202_01238 PF12844 Helix-turn-helix domain DU202_01241 PF06120 DU202_01241 DU202_01244 PF08875 DU202_01244 DU202_01248 PF05838 Glycosyl hydrolase 108 DU202_01248 PF09374 Predicted Peptidoglycan domain DU202_01249 PF00593 TonB dependent receptor DU202_01249 PF07715 TonB-dependent Receptor Plug Domain DU202_01250 PF08019 DU202_01250 DU202_01251 PF13737 DU202_01251 DU202_01252 PF00884 Sulfatase DU202_01255 PF00589 Phage integrase family DU202_01255 PF13356 Domain of unknown function (DUF4102) DU202_01256 PF05164 Cell division protein ZapA DU202_01258 PF03695 Uncharacterised protein family (UPF0149) DU202_01259 PF00557 Metallopeptidase family M24 DU202_01259 PF05195 Aminopeptidase P, N-terminal domain DU202_01260 PF01494 FAD binding domain DU202_01261 PF01494 FAD binding domain DU202_01263 PF13411 MerR HTH family regulatory protein DU202_01264 PF01545 Cation efflux family DU202_01265 PF01810 DU202_01265 DU202_01266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01266 PF03466 LysR substrate binding domain DU202_01268 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DU202_01269 PF02021 Uncharacterised protein family UPF0102 DU202_01270 PF04972 BON domain DU202_01271 PF07859 alpha/beta hydrolase fold DU202_01272 PF00293 NUDIX domain DU202_01272 PF09297 NADH pyrophosphatase zinc ribbon domain DU202_01274 PF00075 RNase H DU202_01274 PF00929 Exonuclease DU202_01275 PF01464 Transglycosylase SLT domain DU202_01275 PF01476 LysM domain DU202_01276 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DU202_01277 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01278 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01279 PF00005 ABC transporter DU202_01279 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DU202_01280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_01281 PF00593 TonB dependent receptor DU202_01281 PF07715 TonB-dependent Receptor Plug Domain DU202_01283 PF00929 Exonuclease DU202_01284 PF01979 Amidohydrolase family DU202_01285 PF00990 GGDEF domain DU202_01286 PF00764 Arginosuccinate synthase DU202_01287 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_01287 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01289 PF00589 Phage integrase family DU202_01289 PF13356 Domain of unknown function (DUF4102) DU202_01292 PF05673 Protein of unknown function (DUF815) DU202_01293 PF00905 Penicillin binding protein transpeptidase domain DU202_01294 PF01609 Transposase DDE domain DU202_01295 PF01609 Transposase DDE domain DU202_01296 PF13340 DU202_01296 DU202_01297 PF01609 Transposase DDE domain DU202_01298 PF00583 Acetyltransferase (GNAT) family DU202_01302 PF05930 Prophage CP4-57 regulatory protein (AlpA) DU202_01303 PF11112 DU202_01303 DU202_01306 PF11726 DU202_01306 DU202_01314 PF05656 DU202_01314 DU202_01315 PF06067 DU202_01315 DU202_01316 PF09588 YqaJ-like viral recombinase domain DU202_01319 PF02661 Fic/DOC family DU202_01320 PF10832 DU202_01320 DU202_01321 PF02384 N-6 DNA Methylase DU202_01321 PF12161 HsdM N-terminal domain DU202_01322 PF01420 Type I restriction modification DNA specificity domain DU202_01323 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DU202_01323 PF04851 Type III restriction enzyme, res subunit DU202_01325 PF00691 OmpA family DU202_01325 PF13677 DU202_01325 DU202_01326 PF15611 DU202_01326 DU202_01328 PF00176 SNF2 family N-terminal domain DU202_01328 PF00271 Helicase conserved C-terminal domain DU202_01329 PF14487 DU202_01329 DU202_01330 PF01661 Macro domain DU202_01332 PF01435 Peptidase family M48 DU202_01333 PF13610 DU202_01333 DU202_01334 PF00403 Heavy-metal-associated domain DU202_01334 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DU202_01334 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01335 PF03203 DU202_01335 DU202_01337 PF00376 MerR family regulatory protein DU202_01337 PF09278 MerR, DNA binding DU202_01338 PF00665 Integrase core domain DU202_01339 PF01695 IstB-like ATP binding protein DU202_01341 PF00809 Pterin binding enzyme DU202_01342 PF00893 Small Multidrug Resistance protein DU202_01343 PF13427 DU202_01343 DU202_01344 PF13610 DU202_01344 DU202_01345 PF00589 Phage integrase family DU202_01345 PF13495 Phage integrase, N-terminal SAM-like domain DU202_01346 PF00583 Acetyltransferase (GNAT) family DU202_01347 PF01909 Nucleotidyltransferase domain DU202_01348 PF13610 DU202_01348 DU202_01349 PF13700 DU202_01349 DU202_01350 PF13610 DU202_01350 DU202_01352 PF13354 Beta-lactamase enzyme family DU202_01353 PF00239 Resolvase, N terminal domain DU202_01353 PF02796 Helix-turn-helix domain of resolvase DU202_01354 PF13610 DU202_01354 DU202_01355 PF01292 Prokaryotic cytochrome b561 DU202_01357 PF01351 Ribonuclease HII DU202_01358 PF02599 Global regulator protein family DU202_01359 PF00696 Amino acid kinase family DU202_01359 PF01842 ACT domain DU202_01359 PF13840 ACT domain DU202_01360 PF01411 tRNA synthetases class II (A) DU202_01360 PF02272 DHHA1 domain DU202_01360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DU202_01361 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DU202_01361 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DU202_01362 PF13393 Histidyl-tRNA synthetase DU202_01363 PF00709 Adenylosuccinate synthetase DU202_01365 PF01435 Peptidase family M48 DU202_01366 PF00248 Aldo/keto reductase family DU202_01367 PF00027 Cyclic nucleotide-binding domain DU202_01367 PF00325 Bacterial regulatory proteins, crp family DU202_01368 PF02566 OsmC-like protein DU202_01369 PF00583 Acetyltransferase (GNAT) family DU202_01370 PF01551 Peptidase family M23 DU202_01371 PF00004 ATPase family associated with various cellular activities (AAA) DU202_01371 PF02861 Clp amino terminal domain DU202_01371 PF07724 AAA domain (Cdc48 subfamily) DU202_01371 PF10431 C-terminal, D2-small domain, of ClpB protein DU202_01372 PF02464 Competence-damaged protein DU202_01374 PF01170 Putative RNA methylase family UPF0020 DU202_01374 PF02926 THUMP domain DU202_01374 PF10672 S-adenosylmethionine-dependent methyltransferase DU202_01376 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DU202_01376 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DU202_01378 PF00691 OmpA family DU202_01379 PF03807 NADP oxidoreductase coenzyme F420-dependent DU202_01379 PF10728 Domain of unknown function (DUF2520) DU202_01380 PF00043 Glutathione S-transferase, C-terminal domain DU202_01380 PF02798 Glutathione S-transferase, N-terminal domain DU202_01381 PF02390 Putative methyltransferase DU202_01382 PF00932 Lamin Tail Domain DU202_01383 PF00043 Glutathione S-transferase, C-terminal domain DU202_01383 PF02798 Glutathione S-transferase, N-terminal domain DU202_01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01385 PF13192 Thioredoxin domain DU202_01386 PF07866 Protein of unknown function (DUF1653) DU202_01387 PF01596 O-methyltransferase DU202_01388 PF13619 DU202_01388 DU202_01389 PF00578 AhpC/TSA family DU202_01389 PF10417 C-terminal domain of 1-Cys peroxiredoxin DU202_01390 PF00270 DEAD/DEAH box helicase DU202_01390 PF00271 Helicase conserved C-terminal domain DU202_01390 PF04408 Helicase associated domain (HA2) DU202_01390 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DU202_01390 PF11898 DU202_01390 DU202_01391 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DU202_01391 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DU202_01392 PF03573 outer membrane porin, OprD family DU202_01393 PF07690 Major Facilitator Superfamily DU202_01394 PF03594 DU202_01394 DU202_01395 PF00106 short chain dehydrogenase DU202_01396 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_01396 PF00175 Oxidoreductase NAD-binding domain DU202_01396 PF00970 Oxidoreductase FAD-binding domain DU202_01397 PF00866 Ring hydroxylating beta subunit DU202_01398 PF00355 Rieske [2Fe-2S] domain DU202_01398 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DU202_01399 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01399 PF03466 LysR substrate binding domain DU202_01400 PF00403 Heavy-metal-associated domain DU202_01401 PF00122 E1-E2 ATPase DU202_01401 PF00403 Heavy-metal-associated domain DU202_01401 PF00702 haloacid dehalogenase-like hydrolase DU202_01402 PF00376 MerR family regulatory protein DU202_01402 PF09278 MerR, DNA binding DU202_01403 PF04828 Glutathione-dependent formaldehyde-activating enzyme DU202_01405 PF03860 Domain of Unknown Function (DUF326) DU202_01407 PF13737 DU202_01407 DU202_01409 PF01810 DU202_01409 DU202_01411 PF02609 Exonuclease VII small subunit DU202_01412 PF02601 DU202_01412 DU202_01412 PF13742 DU202_01412 DU202_01415 PF00717 Peptidase S24-like DU202_01415 PF01381 Helix-turn-helix DU202_01418 PF05838 Glycosyl hydrolase 108 DU202_01418 PF09374 Predicted Peptidoglycan domain DU202_01419 PF01810 DU202_01419 DU202_01420 PF00313 'Cold-shock' DNA-binding domain DU202_01422 PF03807 NADP oxidoreductase coenzyme F420-dependent DU202_01422 PF14748 Pyrroline-5-carboxylate reductase dimerisation DU202_01425 PF13737 DU202_01425 DU202_01428 PF01609 Transposase DDE domain DU202_01429 PF01609 Transposase DDE domain DU202_01430 PF04233 DU202_01430 DU202_01431 PF07690 Major Facilitator Superfamily DU202_01432 PF01638 HxlR-like helix-turn-helix DU202_01435 PF13628 DU202_01435 DU202_01438 PF01406 tRNA synthetases class I (C) catalytic domain DU202_01438 PF09190 DALR domain DU202_01439 PF00571 CBS domain DU202_01439 PF01380 SIS domain DU202_01440 PF08282 haloacid dehalogenase-like hydrolase DU202_01441 PF06835 Lipopolysaccharide-assembly, LptC-related DU202_01442 PF03968 OstA-like protein DU202_01443 PF00005 ABC transporter DU202_01443 PF12399 Branched-chain amino acid ATP-binding cassette transporter DU202_01444 PF02321 Outer membrane efflux protein DU202_01445 PF00005 ABC transporter DU202_01445 PF00664 ABC transporter transmembrane region DU202_01446 PF13437 HlyD family secretion protein DU202_01446 PF13533 Biotin-lipoyl like DU202_01447 PF01205 Uncharacterized protein family UPF0029 DU202_01447 PF09186 Domain of unknown function (DUF1949) DU202_01448 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_01448 PF14602 Hexapeptide repeat of succinyl-transferase DU202_01449 PF00582 Universal stress protein family DU202_01450 PF01596 O-methyltransferase DU202_01451 PF08291 Peptidase M15 DU202_01452 PF00037 4Fe-4S binding domain DU202_01452 PF11953 Domain of unknown function (DUF3470) DU202_01453 PF13673 Acetyltransferase (GNAT) domain DU202_01454 PF00488 MutS domain V DU202_01454 PF01624 MutS domain I DU202_01454 PF05188 MutS domain II DU202_01454 PF05190 MutS family domain IV DU202_01454 PF05192 MutS domain III DU202_01455 PF01037 AsnC family DU202_01455 PF13404 AsnC-type helix-turn-helix domain DU202_01456 PF00892 EamA-like transporter family DU202_01457 PF00563 EAL domain DU202_01458 PF03279 DU202_01458 DU202_01459 PF00440 Bacterial regulatory proteins, tetR family DU202_01460 PF07690 Major Facilitator Superfamily DU202_01461 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) DU202_01462 PF07739 TipAS antibiotic-recognition domain DU202_01462 PF13411 MerR HTH family regulatory protein DU202_01463 PF08856 DU202_01463 DU202_01464 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DU202_01464 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DU202_01466 PF00583 Acetyltransferase (GNAT) family DU202_01468 PF13419 Haloacid dehalogenase-like hydrolase DU202_01469 PF13737 DU202_01469 DU202_01470 PF13354 Beta-lactamase enzyme family DU202_01471 PF13737 DU202_01471 DU202_01472 PF05954 Phage late control gene D protein (GPD) DU202_01472 PF10106 DU202_01472 DU202_01472 PF13296 DU202_01472 DU202_01473 PF03527 DU202_01473 DU202_01473 PF05593 DU202_01473 DU202_01473 PF15636 DU202_01473 DU202_01476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01476 PF03466 LysR substrate binding domain DU202_01477 PF01566 DU202_01477 DU202_01478 PF03746 LamB/YcsF family DU202_01479 PF07286 Protein of unknown function (DUF1445) DU202_01480 PF02626 Allophanate hydrolase subunit 2 DU202_01480 PF02682 Allophanate hydrolase subunit 1 DU202_01481 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DU202_01481 PF00364 Biotin-requiring enzyme DU202_01481 PF02785 Biotin carboxylase C-terminal domain DU202_01481 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_01482 PF00654 Voltage gated chloride channel DU202_01483 PF08238 Sel1 repeat DU202_01487 PF00440 Bacterial regulatory proteins, tetR family DU202_01488 PF10604 Polyketide cyclase / dehydrase and lipid transport DU202_01489 PF08240 Alcohol dehydrogenase GroES-like domain DU202_01489 PF13823 Alcohol dehydrogenase GroES-associated DU202_01490 PF09347 Domain of unknown function (DUF1989) DU202_01491 PF09347 Domain of unknown function (DUF1989) DU202_01492 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DU202_01492 PF00364 Biotin-requiring enzyme DU202_01492 PF02626 Allophanate hydrolase subunit 2 DU202_01492 PF02682 Allophanate hydrolase subunit 1 DU202_01492 PF02785 Biotin carboxylase C-terminal domain DU202_01492 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_01493 PF02525 Flavodoxin-like fold DU202_01494 PF01638 HxlR-like helix-turn-helix DU202_01496 PF13737 DU202_01496 DU202_01498 PF08753 NikR C terminal nickel binding domain DU202_01499 PF01425 Amidase DU202_01500 PF09084 NMT1/THI5 like DU202_01501 PF00005 ABC transporter DU202_01502 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01504 PF13737 DU202_01504 DU202_01505 PF03050 DU202_01505 DU202_01505 PF13005 DU202_01505 DU202_01505 PF13007 DU202_01505 DU202_01505 PF13817 DU202_01505 DU202_01506 PF05717 DU202_01506 DU202_01508 PF01609 Transposase DDE domain DU202_01510 PF05591 DU202_01510 DU202_01511 PF05943 DU202_01511 DU202_01512 PF05638 Protein of unknown function (DUF796) DU202_01513 PF04965 Gene 25-like lysozyme DU202_01514 PF05947 DU202_01514 DU202_01515 PF06996 DU202_01515 DU202_01517 PF06744 DU202_01517 DU202_01517 PF06761 DU202_01517 DU202_01517 PF14331 DU202_01517 DU202_01518 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) DU202_01519 PF00691 OmpA family DU202_01520 PF05488 PAAR motif DU202_01521 PF13737 DU202_01521 DU202_01522 PF00004 ATPase family associated with various cellular activities (AAA) DU202_01522 PF07724 AAA domain (Cdc48 subfamily) DU202_01522 PF10431 C-terminal, D2-small domain, of ClpB protein DU202_01523 PF06812 DU202_01523 DU202_01524 PF05936 DU202_01524 DU202_01525 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) DU202_01527 PF13539 D-alanyl-D-alanine carboxypeptidase DU202_01528 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01528 PF03466 LysR substrate binding domain DU202_01529 PF12796 Ankyrin repeats (3 copies) DU202_01530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DU202_01531 PF07690 Major Facilitator Superfamily DU202_01532 PF06224 DU202_01532 DU202_01533 PF00583 Acetyltransferase (GNAT) family DU202_01534 PF02677 DU202_01534 DU202_01536 PF00376 MerR family regulatory protein DU202_01536 PF09278 MerR, DNA binding DU202_01537 PF03891 DU202_01537 DU202_01537 PF11720 Peptidase inhibitor I78 family DU202_01539 PF00701 Dihydrodipicolinate synthetase family DU202_01540 PF00892 EamA-like transporter family DU202_01541 PF00392 Bacterial regulatory proteins, gntR family DU202_01541 PF07729 FCD domain DU202_01542 PF05544 Proline racemase DU202_01543 PF01266 FAD dependent oxidoreductase DU202_01544 PF13510 2Fe-2S iron-sulfur cluster binding domain DU202_01545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01546 PF08448 PAS fold DU202_01546 PF12833 Helix-turn-helix domain DU202_01547 PF00083 Sugar (and other) transporter DU202_01548 PF00171 Aldehyde dehydrogenase family DU202_01549 PF13520 Amino acid permease DU202_01550 PF03313 DU202_01550 DU202_01550 PF03315 Serine dehydratase beta chain DU202_01551 PF00171 Aldehyde dehydrogenase family DU202_01551 PF01575 MaoC like domain DU202_01552 PF05138 Phenylacetic acid catabolic protein DU202_01553 PF06243 Phenylacetic acid degradation B DU202_01554 PF05138 Phenylacetic acid catabolic protein DU202_01555 PF01883 Domain of unknown function DUF59 DU202_01556 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_01556 PF00175 Oxidoreductase NAD-binding domain DU202_01556 PF00970 Oxidoreductase FAD-binding domain DU202_01557 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01558 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01559 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DU202_01559 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DU202_01560 PF00108 Thiolase, N-terminal domain DU202_01560 PF02803 Thiolase, C-terminal domain DU202_01561 PF00501 AMP-binding enzyme DU202_01561 PF14535 AMP-binding enzyme C-terminal domain DU202_01562 PF07848 PaaX-like protein DU202_01562 PF08223 PaaX-like protein C-terminal domain DU202_01563 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_01564 PF03061 Thioesterase superfamily DU202_01567 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DU202_01569 PF00440 Bacterial regulatory proteins, tetR family DU202_01571 PF00199 Catalase DU202_01572 PF01292 Prokaryotic cytochrome b561 DU202_01573 PF07045 Protein of unknown function (DUF1330) DU202_01574 PF00392 Bacterial regulatory proteins, gntR family DU202_01574 PF07729 FCD domain DU202_01575 PF06684 Amino acid synthesis DU202_01576 PF12697 Alpha/beta hydrolase family DU202_01577 PF01613 Flavin reductase like domain DU202_01578 PF00296 Luciferase-like monooxygenase DU202_01579 PF00171 Aldehyde dehydrogenase family DU202_01580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DU202_01582 PF00171 Aldehyde dehydrogenase family DU202_01583 PF02627 Carboxymuconolactone decarboxylase family DU202_01584 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01584 PF03466 LysR substrate binding domain DU202_01585 PF02525 Flavodoxin-like fold DU202_01586 PF01614 Bacterial transcriptional regulator DU202_01586 PF09339 IclR helix-turn-helix domain DU202_01587 PF01494 FAD binding domain DU202_01588 PF00392 Bacterial regulatory proteins, gntR family DU202_01588 PF07702 UTRA domain DU202_01589 PF13343 Bacterial extracellular solute-binding protein DU202_01590 PF00005 ABC transporter DU202_01591 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01592 PF01266 FAD dependent oxidoreductase DU202_01593 PF00266 Aminotransferase class-V DU202_01594 PF13419 Haloacid dehalogenase-like hydrolase DU202_01596 PF01609 Transposase DDE domain DU202_01597 PF13340 DU202_01597 DU202_01598 PF07690 Major Facilitator Superfamily DU202_01599 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01599 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01599 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01600 PF02515 CoA-transferase family III DU202_01601 PF01614 Bacterial transcriptional regulator DU202_01601 PF09339 IclR helix-turn-helix domain DU202_01602 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01603 PF03060 Nitronate monooxygenase DU202_01604 PF07690 Major Facilitator Superfamily DU202_01605 PF01614 Bacterial transcriptional regulator DU202_01605 PF09339 IclR helix-turn-helix domain DU202_01606 PF00108 Thiolase, N-terminal domain DU202_01606 PF02803 Thiolase, C-terminal domain DU202_01607 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DU202_01607 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DU202_01608 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_01609 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01610 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01611 PF07690 Major Facilitator Superfamily DU202_01612 PF01144 Coenzyme A transferase DU202_01613 PF01144 Coenzyme A transferase DU202_01615 PF07690 Major Facilitator Superfamily DU202_01616 PF03061 Thioesterase superfamily DU202_01617 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01617 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01617 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01617 PF12418 DU202_01617 DU202_01617 PF12806 DU202_01617 DU202_01618 PF13622 Thioesterase-like superfamily DU202_01619 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DU202_01621 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01621 PF03466 LysR substrate binding domain DU202_01622 PF00682 HMGL-like DU202_01623 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DU202_01623 PF00364 Biotin-requiring enzyme DU202_01623 PF02785 Biotin carboxylase C-terminal domain DU202_01623 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_01624 PF00378 Enoyl-CoA hydratase/isomerase family DU202_01625 PF01039 Carboxyl transferase domain DU202_01626 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01626 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01626 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01627 PF00440 Bacterial regulatory proteins, tetR family DU202_01628 PF00501 AMP-binding enzyme DU202_01628 PF13193 AMP-binding enzyme C-terminal domain DU202_01629 PF13649 Methyltransferase domain DU202_01631 PF13472 GDSL-like Lipase/Acylhydrolase family DU202_01632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01632 PF03466 LysR substrate binding domain DU202_01635 PF01609 Transposase DDE domain DU202_01636 PF01609 Transposase DDE domain DU202_01642 PF02464 Competence-damaged protein DU202_01643 PF14518 Iron-containing redox enzyme DU202_01645 PF00199 Catalase DU202_01645 PF06628 Catalase-related immune-responsive DU202_01646 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_01648 PF13737 DU202_01648 DU202_01649 PF13737 DU202_01649 DU202_01650 PF10685 DU202_01650 DU202_01652 PF00717 Peptidase S24-like DU202_01653 PF01810 DU202_01653 DU202_01654 PF01037 AsnC family DU202_01654 PF13412 Winged helix-turn-helix DNA-binding DU202_01657 PF13737 DU202_01657 DU202_01658 PF00072 Response regulator receiver domain DU202_01658 PF00512 His Kinase A (phospho-acceptor) domain DU202_01658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_01659 PF00072 Response regulator receiver domain DU202_01659 PF00196 Bacterial regulatory proteins, luxR family DU202_01660 PF14542 GCN5-related N-acetyl-transferase DU202_01661 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01662 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01663 PF00005 ABC transporter DU202_01664 PF00497 Bacterial extracellular solute-binding proteins, family 3 DU202_01665 PF00497 Bacterial extracellular solute-binding proteins, family 3 DU202_01666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01666 PF03466 LysR substrate binding domain DU202_01667 PF01810 DU202_01667 DU202_01668 PF00266 Aminotransferase class-V DU202_01670 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_01670 PF06426 Serine acetyltransferase, N-terminal DU202_01671 PF00581 Rhodanese-like domain DU202_01672 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_01673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01673 PF03466 LysR substrate binding domain DU202_01674 PF00043 Glutathione S-transferase, C-terminal domain DU202_01674 PF02798 Glutathione S-transferase, N-terminal domain DU202_01675 PF13417 Glutathione S-transferase, N-terminal domain DU202_01675 PF14834 Glutathione S-transferase, C-terminal domain DU202_01676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01676 PF03466 LysR substrate binding domain DU202_01677 PF03788 DU202_01677 DU202_01678 PF04172 DU202_01678 DU202_01679 PF00155 Aminotransferase class I and II DU202_01679 PF00392 Bacterial regulatory proteins, gntR family DU202_01680 PF04299 Putative FMN-binding domain DU202_01681 PF13302 Acetyltransferase (GNAT) domain DU202_01682 PF07690 Major Facilitator Superfamily DU202_01683 PF16957 DU202_01683 DU202_01684 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DU202_01685 PF06857 DU202_01685 DU202_01686 PF01039 Carboxyl transferase domain DU202_01687 PF06833 Malonate decarboxylase gamma subunit (MdcE) DU202_01688 PF10620 DU202_01688 DU202_01689 PF00698 Acyl transferase domain DU202_01690 PF03817 DU202_01690 DU202_01691 PF03818 DU202_01691 DU202_01692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01692 PF03466 LysR substrate binding domain DU202_01693 PF00155 Aminotransferase class I and II DU202_01693 PF00392 Bacterial regulatory proteins, gntR family DU202_01695 PF02322 DU202_01695 DU202_01696 PF01654 DU202_01696 DU202_01698 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_01699 PF00296 Luciferase-like monooxygenase DU202_01700 PF13737 DU202_01700 DU202_01701 PF00083 Sugar (and other) transporter DU202_01703 PF01609 Transposase DDE domain DU202_01704 PF13340 DU202_01704 DU202_01705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DU202_01706 PF13340 DU202_01706 DU202_01707 PF01609 Transposase DDE domain DU202_01708 PF00005 ABC transporter DU202_01709 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01710 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DU202_01711 PF01177 Asp/Glu/Hydantoin racemase DU202_01712 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DU202_01713 PF00392 Bacterial regulatory proteins, gntR family DU202_01713 PF07729 FCD domain DU202_01714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01714 PF03466 LysR substrate binding domain DU202_01715 PF00857 Isochorismatase family DU202_01716 PF07969 Amidohydrolase family DU202_01717 PF01609 Transposase DDE domain DU202_01718 PF13340 DU202_01718 DU202_01719 PF07235 DU202_01719 DU202_01720 PF03960 ArsC family DU202_01721 PF01022 Bacterial regulatory protein, arsR family DU202_01722 PF01758 Sodium Bile acid symporter family DU202_01723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01723 PF03466 LysR substrate binding domain DU202_01724 PF02417 DU202_01724 DU202_01725 PF02417 DU202_01725 DU202_01726 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_01726 PF13192 Thioredoxin domain DU202_01729 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_01729 PF06426 Serine acetyltransferase, N-terminal DU202_01730 PF00588 SpoU rRNA Methylase family DU202_01731 PF02811 PHP domain DU202_01731 PF07733 Bacterial DNA polymerase III alpha subunit DU202_01731 PF14579 Helix-hairpin-helix motif DU202_01732 PF00710 Asparaginase DU202_01733 PF00375 Sodium:dicarboxylate symporter family DU202_01734 PF00155 Aminotransferase class I and II DU202_01735 PF01641 SelR domain DU202_01736 PF00255 Glutathione peroxidase DU202_01737 PF02311 AraC-like ligand binding domain DU202_01737 PF12833 Helix-turn-helix domain DU202_01738 PF01810 DU202_01738 DU202_01739 PF00155 Aminotransferase class I and II DU202_01740 PF01909 Nucleotidyltransferase domain DU202_01740 PF01966 HD domain DU202_01740 PF08335 GlnD PII-uridylyltransferase DU202_01741 PF02222 ATP-grasp domain DU202_01742 PF14552 Tautomerase enzyme DU202_01743 PF13737 DU202_01743 DU202_01744 PF05437 DU202_01744 DU202_01745 PF03591 DU202_01745 DU202_01748 PF00027 Cyclic nucleotide-binding domain DU202_01748 PF13545 Crp-like helix-turn-helix domain DU202_01749 PF06127 DU202_01749 DU202_01750 PF01926 50S ribosome-binding GTPase DU202_01750 PF06071 Protein of unknown function (DUF933) DU202_01751 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01752 PF00005 ABC transporter DU202_01752 PF09383 NIL domain DU202_01753 PF03180 NLPA lipoprotein DU202_01754 PF03180 NLPA lipoprotein DU202_01755 PF00296 Luciferase-like monooxygenase DU202_01756 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01756 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_01757 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01757 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01757 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_01758 PF13417 Glutathione S-transferase, N-terminal domain DU202_01758 PF14497 Glutathione S-transferase, C-terminal domain DU202_01759 PF13737 DU202_01759 DU202_01760 PF00497 Bacterial extracellular solute-binding proteins, family 3 DU202_01761 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01763 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01764 PF00005 ABC transporter DU202_01766 PF01037 AsnC family DU202_01766 PF13412 Winged helix-turn-helix DNA-binding DU202_01767 PF01709 Transcriptional regulator DU202_01768 PF01553 Acyltransferase DU202_01769 PF00440 Bacterial regulatory proteins, tetR family DU202_01771 PF13737 DU202_01771 DU202_01773 PF13737 DU202_01773 DU202_01775 PF00589 Phage integrase family DU202_01775 PF13356 Domain of unknown function (DUF4102) DU202_01776 PF13737 DU202_01776 DU202_01778 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01778 PF03466 LysR substrate binding domain DU202_01779 PF05232 DU202_01779 DU202_01780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DU202_01782 PF00892 EamA-like transporter family DU202_01783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_01783 PF03466 LysR substrate binding domain DU202_01785 PF00419 Fimbrial protein DU202_01786 PF00577 Outer membrane usher protein DU202_01786 PF13953 PapC C-terminal domain DU202_01786 PF13954 PapC N-terminal domain DU202_01787 PF13737 DU202_01787 DU202_01788 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DU202_01788 PF02753 Pili assembly chaperone PapD, C-terminal domain DU202_01789 PF16970 DU202_01789 DU202_01791 PF13737 DU202_01791 DU202_01793 PF04055 Radical SAM superfamily DU202_01793 PF06968 Biotin and Thiamin Synthesis associated domain DU202_01794 PF08331 DU202_01794 DU202_01794 PF13484 DU202_01794 DU202_01795 PF01256 Carbohydrate kinase DU202_01795 PF03853 YjeF-related protein N-terminus DU202_01796 PF02075 Crossover junction endodeoxyribonuclease RuvC DU202_01797 PF01381 Helix-turn-helix DU202_01798 PF13420 Acetyltransferase (GNAT) domain DU202_01799 PF00905 Penicillin binding protein transpeptidase domain DU202_01800 PF04186 DU202_01800 DU202_01803 PF00438 S-adenosylmethionine synthetase, N-terminal domain DU202_01803 PF02772 S-adenosylmethionine synthetase, central domain DU202_01803 PF02773 S-adenosylmethionine synthetase, C-terminal domain DU202_01804 PF00456 Transketolase, thiamine diphosphate binding domain DU202_01804 PF02779 Transketolase, pyrimidine binding domain DU202_01804 PF02780 Transketolase, C-terminal domain DU202_01805 PF02566 OsmC-like protein DU202_01806 PF04264 YceI-like domain DU202_01807 PF04970 Lecithin retinol acyltransferase DU202_01808 PF09992 Predicted periplasmic protein (DUF2233) DU202_01810 PF05958 tRNA (Uracil-5-)-methyltransferase DU202_01811 PF04229 GrpB protein DU202_01812 PF00171 Aldehyde dehydrogenase family DU202_01812 PF01619 Proline dehydrogenase DU202_01812 PF14850 DNA-binding domain of Proline dehydrogenase DU202_01813 PF01037 AsnC family DU202_01813 PF13404 AsnC-type helix-turn-helix domain DU202_01814 PF00474 Sodium:solute symporter family DU202_01815 PF02146 Sir2 family DU202_01816 PF13737 DU202_01816 DU202_01817 PF01597 Glycine cleavage H-protein DU202_01818 PF12625 DU202_01818 DU202_01818 PF12833 Helix-turn-helix domain DU202_01819 PF01575 MaoC like domain DU202_01820 PF00005 ABC transporter DU202_01820 PF00664 ABC transporter transmembrane region DU202_01821 PF09831 DU202_01821 DU202_01822 PF06912 DU202_01822 DU202_01823 PF00375 Sodium:dicarboxylate symporter family DU202_01824 PF01022 Bacterial regulatory protein, arsR family DU202_01825 PF00440 Bacterial regulatory proteins, tetR family DU202_01826 PF08007 Cupin superfamily protein DU202_01827 PF02545 Maf-like protein DU202_01828 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) DU202_01829 PF00162 Phosphoglycerate kinase DU202_01831 PF01116 Fructose-bisphosphate aldolase class-II DU202_01832 PF00639 PPIC-type PPIASE domain DU202_01832 PF09312 SurA N-terminal domain DU202_01832 PF13616 PPIC-type PPIASE domain DU202_01833 PF03968 OstA-like protein DU202_01833 PF04453 Organic solvent tolerance protein DU202_01834 PF01636 Phosphotransferase enzyme family DU202_01835 PF00483 Nucleotidyl transferase DU202_01836 PF02527 rRNA small subunit methyltransferase G DU202_01837 PF13614 AAA domain DU202_01838 PF02195 ParB-like nuclease domain DU202_01839 PF01618 DU202_01839 DU202_01840 PF02472 Biopolymer transport protein ExbD/TolR DU202_01841 PF00005 ABC transporter DU202_01841 PF00664 ABC transporter transmembrane region DU202_01842 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DU202_01843 PF02348 Cytidylyltransferase DU202_01844 PF13177 DNA polymerase III, delta subunit DU202_01845 PF07238 PilZ domain DU202_01846 PF01026 TatD related DNase DU202_01847 PF00440 Bacterial regulatory proteins, tetR family DU202_01848 PF07963 Prokaryotic N-terminal methylation motif DU202_01849 PF02501 Type II secretion system (T2SS), protein I DU202_01849 PF07963 Prokaryotic N-terminal methylation motif DU202_01850 PF07963 Prokaryotic N-terminal methylation motif DU202_01850 PF11612 Type II secretion system (T2SS), protein J DU202_01851 PF03934 Type II secretion system (T2SS), protein K DU202_01852 PF01242 6-pyruvoyl tetrahydropterin synthase DU202_01853 PF03167 Uracil DNA glycosylase superfamily DU202_01854 PF16113 DU202_01854 DU202_01855 PF14437 DU202_01855 DU202_01856 PF10604 Polyketide cyclase / dehydrase and lipid transport DU202_01857 PF02224 Cytidylate kinase DU202_01858 PF00575 S1 RNA binding domain DU202_01859 PF00216 Bacterial DNA-binding protein DU202_01860 PF06305 DU202_01860 DU202_01861 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DU202_01862 PF03956 DU202_01862 DU202_01864 PF00743 Flavin-binding monooxygenase-like DU202_01865 PF12625 DU202_01865 DU202_01865 PF12833 Helix-turn-helix domain DU202_01866 PF03969 AFG1-like ATPase DU202_01867 PF00589 Phage integrase family DU202_01870 PF08241 Methyltransferase domain DU202_01876 PF00717 Peptidase S24-like DU202_01879 PF07120 DU202_01879 DU202_01880 PF00772 DnaB-like helicase N terminal domain DU202_01880 PF03796 DnaB-like helicase C terminal domain DU202_01894 PF03592 Terminase small subunit DU202_01896 PF03354 DU202_01896 DU202_01897 PF04860 Phage portal protein DU202_01898 PF04586 DU202_01898 DU202_01899 PF05065 Phage capsid family DU202_01901 PF05135 Phage gp6-like head-tail connector protein DU202_01902 PF05521 Phage head-tail joining protein DU202_01903 PF04883 DU202_01903 DU202_01904 PF11367 Protein of unknown function (DUF3168) DU202_01905 PF16460 DU202_01905 DU202_01906 PF16459 DU202_01906 DU202_01909 PF01464 Transglycosylase SLT domain DU202_01911 PF05939 DU202_01911 DU202_01913 PF05100 DU202_01913 DU202_01914 PF00877 NlpC/P60 family DU202_01914 PF14464 Prokaryotic homologs of the JAB domain DU202_01915 PF06805 DU202_01915 DU202_01916 PF13550 DU202_01916 DU202_01918 PF16082 DU202_01918 DU202_01919 PF00959 Phage lysozyme DU202_01922 PF01274 Malate synthase DU202_01923 PF00583 Acetyltransferase (GNAT) family DU202_01924 PF02472 Biopolymer transport protein ExbD/TolR DU202_01925 PF02472 Biopolymer transport protein ExbD/TolR DU202_01926 PF01618 DU202_01926 DU202_01927 PF03544 Gram-negative bacterial TonB protein C-terminal DU202_01928 PF00593 TonB dependent receptor DU202_01929 PF00593 TonB dependent receptor DU202_01929 PF07715 TonB-dependent Receptor Plug Domain DU202_01931 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DU202_01932 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DU202_01933 PF01432 Peptidase family M3 DU202_01934 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01935 PF00528 Binding-protein-dependent transport system inner membrane component DU202_01935 PF12911 DU202_01935 DU202_01936 PF00005 ABC transporter DU202_01936 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DU202_01937 PF02586 Uncharacterised ACR, COG2135 DU202_01939 PF00459 Inositol monophosphatase family DU202_01940 PF00300 Histidine phosphatase superfamily (branch 1) DU202_01941 PF01649 Ribosomal protein S20 DU202_01942 PF01118 Semialdehyde dehydrogenase, NAD binding domain DU202_01943 PF03737 Demethylmenaquinone methyltransferase DU202_01944 PF13417 Glutathione S-transferase, N-terminal domain DU202_01945 PF04261 Dyp-type peroxidase family DU202_01947 PF00270 DEAD/DEAH box helicase DU202_01947 PF00271 Helicase conserved C-terminal domain DU202_01947 PF02559 CarD-like/TRCF domain DU202_01947 PF03461 TRCF domain DU202_01948 PF01230 HIT domain DU202_01949 PF00211 Adenylate and Guanylate cyclase catalytic domain DU202_01950 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_01951 PF00012 Hsp70 protein DU202_01952 PF00226 DnaJ domain DU202_01952 PF07743 HSCB C-terminal oligomerisation domain DU202_01953 PF01521 Iron-sulphur cluster biosynthesis DU202_01954 PF01592 NifU-like N terminal domain DU202_01955 PF00266 Aminotransferase class-V DU202_01956 PF02082 Transcriptional regulator DU202_01958 PF05597 DU202_01958 DU202_01959 PF00216 Bacterial DNA-binding protein DU202_01960 PF13616 PPIC-type PPIASE domain DU202_01960 PF13624 SurA N-terminal domain DU202_01961 PF12833 Helix-turn-helix domain DU202_01961 PF12852 Cupin DU202_01962 PF00487 DU202_01962 DU202_01963 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01963 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_01964 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_01964 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_01965 PF03109 DU202_01965 DU202_01967 PF04073 Aminoacyl-tRNA editing domain DU202_01968 PF04183 IucA / IucC family DU202_01968 PF06276 Ferric iron reductase FhuF-like transporter DU202_01969 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DU202_01970 PF07690 Major Facilitator Superfamily DU202_01971 PF04183 IucA / IucC family DU202_01971 PF06276 Ferric iron reductase FhuF-like transporter DU202_01972 PF04183 IucA / IucC family DU202_01972 PF06276 Ferric iron reductase FhuF-like transporter DU202_01973 PF11575 DU202_01973 DU202_01974 PF03737 Demethylmenaquinone methyltransferase DU202_01975 PF00593 TonB dependent receptor DU202_01975 PF07715 TonB-dependent Receptor Plug Domain DU202_01977 PF03929 DU202_01977 DU202_01979 PF13523 Acetyltransferase (GNAT) domain DU202_01980 PF08125 Mannitol dehydrogenase C-terminal domain DU202_01980 PF13419 Haloacid dehalogenase-like hydrolase DU202_01981 PF13563 2'-5' RNA ligase superfamily DU202_01982 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DU202_01983 PF02277 Phosphoribosyltransferase DU202_01984 PF00300 Histidine phosphatase superfamily (branch 1) DU202_01985 PF00328 Histidine phosphatase superfamily (branch 2) DU202_01986 PF02654 DU202_01986 DU202_01987 PF01609 Transposase DDE domain DU202_01988 PF13340 DU202_01988 DU202_01989 PF00793 DAHP synthetase I family DU202_01990 PF01925 DU202_01990 DU202_01992 PF03929 DU202_01992 DU202_01994 PF00593 TonB dependent receptor DU202_01994 PF07715 TonB-dependent Receptor Plug Domain DU202_01995 PF02684 DU202_01995 DU202_01996 PF00440 Bacterial regulatory proteins, tetR family DU202_01996 PF09209 Domain of unknown function (DUF1956) DU202_01997 PF13437 HlyD family secretion protein DU202_01997 PF13533 Biotin-lipoyl like DU202_01998 PF00005 ABC transporter DU202_01999 PF12698 ABC-2 family transporter protein DU202_02000 PF12698 ABC-2 family transporter protein DU202_02001 PF10977 DU202_02001 DU202_02003 PF06078 Bacterial protein of unknown function (DUF937) DU202_02004 PF13609 Gram-negative porin DU202_02005 PF01230 HIT domain DU202_02006 PF13308 YARHG domain DU202_02007 PF04828 Glutathione-dependent formaldehyde-activating enzyme DU202_02010 PF13103 TonB C terminal DU202_02011 PF08241 Methyltransferase domain DU202_02012 PF00561 alpha/beta hydrolase fold DU202_02013 PF01053 Cys/Met metabolism PLP-dependent enzyme DU202_02015 PF02575 YbaB/EbfC DNA-binding family DU202_02016 PF02132 RecR protein DU202_02016 PF13662 Toprim domain DU202_02017 PF00570 HRDC domain DU202_02017 PF01612 3'-5' exonuclease DU202_02021 PF05166 YcgL domain DU202_02023 PF00004 ATPase family associated with various cellular activities (AAA) DU202_02024 PF05762 VWA domain containing CoxE-like protein DU202_02025 PF00291 Pyridoxal-phosphate dependent enzyme DU202_02026 PF05175 Methyltransferase small domain DU202_02027 PF01264 Chorismate synthase DU202_02028 PF00990 GGDEF domain DU202_02029 PF14518 Iron-containing redox enzyme DU202_02031 PF04055 Radical SAM superfamily DU202_02032 PF00676 Dehydrogenase E1 component DU202_02033 PF02779 Transketolase, pyrimidine binding domain DU202_02033 PF02780 Transketolase, C-terminal domain DU202_02034 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DU202_02034 PF00364 Biotin-requiring enzyme DU202_02034 PF02817 e3 binding domain DU202_02035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DU202_02035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02036 PF00106 short chain dehydrogenase DU202_02037 PF00107 Zinc-binding dehydrogenase DU202_02037 PF08240 Alcohol dehydrogenase GroES-like domain DU202_02038 PF01062 DU202_02038 DU202_02039 PF00158 Sigma-54 interaction domain DU202_02039 PF02954 Bacterial regulatory protein, Fis family DU202_02040 PF00753 Metallo-beta-lactamase superfamily DU202_02041 PF04273 Putative phosphatase (DUF442) DU202_02041 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02042 PF01925 DU202_02042 DU202_02043 PF00742 Homoserine dehydrogenase DU202_02043 PF03447 Homoserine dehydrogenase, NAD binding domain DU202_02044 PF00892 EamA-like transporter family DU202_02045 PF12833 Helix-turn-helix domain DU202_02046 PF01638 HxlR-like helix-turn-helix DU202_02047 PF02525 Flavodoxin-like fold DU202_02048 PF02417 DU202_02048 DU202_02049 PF00392 Bacterial regulatory proteins, gntR family DU202_02049 PF07702 UTRA domain DU202_02050 PF00890 FAD binding domain DU202_02050 PF02910 Fumarate reductase flavoprotein C-term DU202_02051 PF12838 4Fe-4S dicluster domain DU202_02052 PF13379 NMT1-like family DU202_02053 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02054 PF00005 ABC transporter DU202_02055 PF13646 HEAT repeats DU202_02056 PF06155 Protein of unknown function (DUF971) DU202_02057 PF00083 Sugar (and other) transporter DU202_02057 PF07690 Major Facilitator Superfamily DU202_02058 PF13737 DU202_02058 DU202_02059 PF00593 TonB dependent receptor DU202_02059 PF07715 TonB-dependent Receptor Plug Domain DU202_02060 PF00206 Lyase DU202_02060 PF10415 Fumarase C C-terminus DU202_02063 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02063 PF03466 LysR substrate binding domain DU202_02064 PF01609 Transposase DDE domain DU202_02065 PF13340 DU202_02065 DU202_02066 PF03466 LysR substrate binding domain DU202_02067 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02067 PF03466 LysR substrate binding domain DU202_02068 PF00108 Thiolase, N-terminal domain DU202_02068 PF02803 Thiolase, C-terminal domain DU202_02069 PF02667 DU202_02069 DU202_02070 PF01144 Coenzyme A transferase DU202_02071 PF01144 Coenzyme A transferase DU202_02072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02072 PF03466 LysR substrate binding domain DU202_02074 PF02447 DU202_02074 DU202_02075 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_02076 PF12833 Helix-turn-helix domain DU202_02076 PF14525 DU202_02076 DU202_02077 PF07690 Major Facilitator Superfamily DU202_02078 PF01738 Dienelactone hydrolase family DU202_02079 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_02081 PF01613 Flavin reductase like domain DU202_02082 PF13557 DU202_02082 DU202_02083 PF12833 Helix-turn-helix domain DU202_02083 PF14525 DU202_02083 DU202_02084 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_02084 PF00175 Oxidoreductase NAD-binding domain DU202_02084 PF00970 Oxidoreductase FAD-binding domain DU202_02085 PF00866 Ring hydroxylating beta subunit DU202_02086 PF00355 Rieske [2Fe-2S] domain DU202_02086 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DU202_02087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02088 PF13531 Bacterial extracellular solute-binding protein DU202_02089 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02090 PF00005 ABC transporter DU202_02091 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_02092 PF00857 Isochorismatase family DU202_02093 PF01475 Ferric uptake regulator family DU202_02094 PF00149 Calcineurin-like phosphoesterase DU202_02094 PF02872 5'-nucleotidase, C-terminal domain DU202_02095 PF02503 Polyphosphate kinase middle domain DU202_02095 PF13089 Polyphosphate kinase N-terminal domain DU202_02095 PF13090 Polyphosphate kinase C-terminal domain DU202_02096 PF12706 Beta-lactamase superfamily domain DU202_02097 PF03070 TENA/THI-4/PQQC family DU202_02098 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DU202_02099 PF04055 Radical SAM superfamily DU202_02099 PF13186 Iron-sulfur cluster-binding domain DU202_02099 PF13353 4Fe-4S single cluster domain DU202_02100 PF01244 Membrane dipeptidase (Peptidase family M19) DU202_02104 PF13091 PLD-like domain DU202_02107 PF00199 Catalase DU202_02109 PF00107 Zinc-binding dehydrogenase DU202_02109 PF08240 Alcohol dehydrogenase GroES-like domain DU202_02110 PF16223 DU202_02110 DU202_02111 PF00419 Fimbrial protein DU202_02112 PF00577 Outer membrane usher protein DU202_02112 PF13953 PapC C-terminal domain DU202_02112 PF13954 PapC N-terminal domain DU202_02113 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DU202_02113 PF02753 Pili assembly chaperone PapD, C-terminal domain DU202_02115 PF13737 DU202_02115 DU202_02117 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DU202_02119 PF01266 FAD dependent oxidoreductase DU202_02120 PF00440 Bacterial regulatory proteins, tetR family DU202_02121 PF03435 Saccharopine dehydrogenase DU202_02122 PF01593 Flavin containing amine oxidoreductase DU202_02123 PF13738 Pyridine nucleotide-disulphide oxidoreductase DU202_02124 PF12146 Putative lysophospholipase DU202_02125 PF12146 Putative lysophospholipase DU202_02126 PF02321 Outer membrane efflux protein DU202_02127 PF00873 AcrB/AcrD/AcrF family DU202_02128 PF16576 DU202_02128 DU202_02129 PF00072 Response regulator receiver domain DU202_02129 PF00486 Transcriptional regulatory protein, C terminal DU202_02130 PF00512 His Kinase A (phospho-acceptor) domain DU202_02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_02132 PF12625 DU202_02132 DU202_02132 PF12833 Helix-turn-helix domain DU202_02133 PF12146 Putative lysophospholipase DU202_02134 PF00106 short chain dehydrogenase DU202_02135 PF00106 short chain dehydrogenase DU202_02137 PF05488 PAAR motif DU202_02139 PF13737 DU202_02139 DU202_02140 PF13328 HD domain DU202_02142 PF01975 Survival protein SurE DU202_02146 PF00583 Acetyltransferase (GNAT) family DU202_02147 PF01609 Transposase DDE domain DU202_02148 PF13340 DU202_02148 DU202_02150 PF02321 Outer membrane efflux protein DU202_02151 PF03321 GH3 auxin-responsive promoter DU202_02153 PF07690 Major Facilitator Superfamily DU202_02154 PF13437 HlyD family secretion protein DU202_02154 PF13533 Biotin-lipoyl like DU202_02155 PF13737 DU202_02155 DU202_02157 PF01425 Amidase DU202_02159 PF10076 DU202_02159 DU202_02160 PF04865 DU202_02160 DU202_02161 PF07409 DU202_02161 DU202_02162 PF06890 Bacteriophage Mu Gp45 protein DU202_02164 PF07157 DU202_02164 DU202_02165 PF10145 DU202_02165 DU202_02169 PF17482 DU202_02169 DU202_02173 PF08873 DU202_02173 DU202_02174 PF07030 DU202_02174 DU202_02175 PF10124 DU202_02175 DU202_02177 PF10123 DU202_02177 DU202_02178 PF05069 DU202_02178 DU202_02179 PF04233 DU202_02179 DU202_02180 PF06074 DU202_02180 DU202_02181 PF02086 D12 class N6 adenine-specific DNA methyltransferase DU202_02184 PF11985 DU202_02184 DU202_02188 PF05838 Glycosyl hydrolase 108 DU202_02188 PF09374 Predicted Peptidoglycan domain DU202_02190 PF00717 Peptidase S24-like DU202_02190 PF01381 Helix-turn-helix DU202_02193 PF09339 IclR helix-turn-helix domain DU202_02195 PF00665 Integrase core domain DU202_02196 PF13401 AAA domain DU202_02197 PF01258 Prokaryotic dksA/traR C4-type zinc finger DU202_02200 PF11363 DU202_02200 DU202_02202 PF00216 Bacterial DNA-binding protein DU202_02204 PF10979 DU202_02204 DU202_02207 PF06252 DU202_02207 DU202_02208 PF08765 Mor transcription activator family DU202_02209 PF00196 Bacterial regulatory proteins, luxR family DU202_02212 PF13737 DU202_02212 DU202_02221 PF13737 DU202_02221 DU202_02225 PF02219 Methylenetetrahydrofolate reductase DU202_02225 PF12225 DU202_02225 DU202_02226 PF00293 NUDIX domain DU202_02227 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DU202_02228 PF00156 Phosphoribosyl transferase domain DU202_02229 PF01925 DU202_02229 DU202_02230 PF02311 AraC-like ligand binding domain DU202_02230 PF12833 Helix-turn-helix domain DU202_02231 PF00583 Acetyltransferase (GNAT) family DU202_02232 PF00005 ABC transporter DU202_02233 PF01032 FecCD transport family DU202_02234 PF01497 Periplasmic binding protein DU202_02235 PF13737 DU202_02235 DU202_02236 PF00107 Zinc-binding dehydrogenase DU202_02236 PF08240 Alcohol dehydrogenase GroES-like domain DU202_02237 PF02627 Carboxymuconolactone decarboxylase family DU202_02238 PF07883 Cupin domain DU202_02239 PF06719 DU202_02239 DU202_02239 PF12833 Helix-turn-helix domain DU202_02240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DU202_02240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DU202_02241 PF07690 Major Facilitator Superfamily DU202_02242 PF01370 NAD dependent epimerase/dehydratase family DU202_02243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02243 PF03466 LysR substrate binding domain DU202_02244 PF01557 Fumarylacetoacetate (FAA) hydrolase family DU202_02245 PF00920 Dehydratase family DU202_02246 PF00171 Aldehyde dehydrogenase family DU202_02247 PF00440 Bacterial regulatory proteins, tetR family DU202_02247 PF14246 AefR-like transcriptional repressor, C-terminal region DU202_02248 PF07690 Major Facilitator Superfamily DU202_02249 PF13437 HlyD family secretion protein DU202_02249 PF13533 Biotin-lipoyl like DU202_02250 PF00353 Hemolysin-type calcium-binding repeat (2 copies) DU202_02251 PF13737 DU202_02251 DU202_02252 PF01609 Transposase DDE domain DU202_02253 PF13340 DU202_02253 DU202_02254 PF00353 Hemolysin-type calcium-binding repeat (2 copies) DU202_02255 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DU202_02257 PF03737 Demethylmenaquinone methyltransferase DU202_02258 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DU202_02258 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DU202_02259 PF07690 Major Facilitator Superfamily DU202_02260 PF01614 Bacterial transcriptional regulator DU202_02260 PF09339 IclR helix-turn-helix domain DU202_02261 PF04657 DU202_02261 DU202_02262 PF04657 DU202_02262 DU202_02263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02263 PF03466 LysR substrate binding domain DU202_02264 PF07690 Major Facilitator Superfamily DU202_02265 PF08450 SMP-30/Gluconolaconase/LRE-like region DU202_02266 PF00392 Bacterial regulatory proteins, gntR family DU202_02266 PF07702 UTRA domain DU202_02267 PF07158 DU202_02267 DU202_02268 PF04909 Amidohydrolase DU202_02269 PF07690 Major Facilitator Superfamily DU202_02271 PF13737 DU202_02271 DU202_02273 PF04829 DU202_02273 DU202_02273 PF04830 DU202_02273 DU202_02273 PF14437 DU202_02273 DU202_02274 PF13737 DU202_02274 DU202_02275 PF01609 Transposase DDE domain DU202_02276 PF13340 DU202_02276 DU202_02277 PF01609 Transposase DDE domain DU202_02278 PF05860 haemagglutination activity domain DU202_02278 PF13018 DU202_02278 DU202_02279 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DU202_02279 PF08479 POTRA domain, ShlB-type DU202_02279 PF17287 DU202_02279 DU202_02280 PF00440 Bacterial regulatory proteins, tetR family DU202_02281 PF01546 Peptidase family M20/M25/M40 DU202_02281 PF07687 Peptidase dimerisation domain DU202_02283 PF00999 Sodium/hydrogen exchanger family DU202_02283 PF02254 TrkA-N domain DU202_02284 PF07995 Glucose / Sorbosone dehydrogenase DU202_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02285 PF03466 LysR substrate binding domain DU202_02286 PF00857 Isochorismatase family DU202_02287 PF03992 Antibiotic biosynthesis monooxygenase DU202_02288 PF00440 Bacterial regulatory proteins, tetR family DU202_02289 PF12706 Beta-lactamase superfamily domain DU202_02290 PF02082 Transcriptional regulator DU202_02291 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02292 PF01965 DJ-1/PfpI family DU202_02293 PF13411 MerR HTH family regulatory protein DU202_02294 PF01872 RibD C-terminal domain DU202_02295 PF03435 Saccharopine dehydrogenase DU202_02296 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_02297 PF01609 Transposase DDE domain DU202_02298 PF01609 Transposase DDE domain DU202_02299 PF01047 MarR family DU202_02300 PF07859 alpha/beta hydrolase fold DU202_02301 PF01965 DJ-1/PfpI family DU202_02303 PF00199 Catalase DU202_02303 PF06628 Catalase-related immune-responsive DU202_02304 PF00561 alpha/beta hydrolase fold DU202_02305 PF06314 Acetoacetate decarboxylase (ADC) DU202_02306 PF00171 Aldehyde dehydrogenase family DU202_02307 PF00107 Zinc-binding dehydrogenase DU202_02307 PF08240 Alcohol dehydrogenase GroES-like domain DU202_02308 PF00474 Sodium:solute symporter family DU202_02309 PF04341 DU202_02309 DU202_02310 PF00501 AMP-binding enzyme DU202_02310 PF13193 AMP-binding enzyme C-terminal domain DU202_02311 PF00158 Sigma-54 interaction domain DU202_02311 PF02954 Bacterial regulatory protein, Fis family DU202_02311 PF06506 Propionate catabolism activator DU202_02312 PF00106 short chain dehydrogenase DU202_02313 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_02313 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_02313 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02314 PF00300 Histidine phosphatase superfamily (branch 1) DU202_02316 PF01636 Phosphotransferase enzyme family DU202_02317 PF00171 Aldehyde dehydrogenase family DU202_02319 PF07690 Major Facilitator Superfamily DU202_02320 PF00920 Dehydratase family DU202_02321 PF00392 Bacterial regulatory proteins, gntR family DU202_02321 PF07729 FCD domain DU202_02322 PF09694 DU202_02322 DU202_02323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02323 PF03466 LysR substrate binding domain DU202_02324 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DU202_02324 PF13378 Enolase C-terminal domain-like DU202_02325 PF02426 Muconolactone delta-isomerase DU202_02326 PF00775 Dioxygenase DU202_02326 PF04444 Catechol dioxygenase N terminus DU202_02327 PF01144 Coenzyme A transferase DU202_02328 PF01144 Coenzyme A transferase DU202_02329 PF00108 Thiolase, N-terminal domain DU202_02329 PF02803 Thiolase, C-terminal domain DU202_02330 PF00561 alpha/beta hydrolase fold DU202_02331 PF01804 Penicillin amidase DU202_02332 PF00171 Aldehyde dehydrogenase family DU202_02334 PF01179 Copper amine oxidase, enzyme domain DU202_02334 PF02727 Copper amine oxidase, N2 domain DU202_02334 PF02728 Copper amine oxidase, N3 domain DU202_02334 PF07833 Copper amine oxidase N-terminal domain DU202_02335 PF12833 Helix-turn-helix domain DU202_02335 PF14525 DU202_02335 DU202_02336 PF01613 Flavin reductase like domain DU202_02337 PF00111 2Fe-2S iron-sulfur cluster binding domain DU202_02337 PF00175 Oxidoreductase NAD-binding domain DU202_02337 PF00970 Oxidoreductase FAD-binding domain DU202_02338 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_02339 PF00866 Ring hydroxylating beta subunit DU202_02340 PF00355 Rieske [2Fe-2S] domain DU202_02340 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DU202_02341 PF13577 SnoaL-like domain DU202_02343 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02343 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DU202_02344 PF01425 Amidase DU202_02345 PF01047 MarR family DU202_02346 PF07690 Major Facilitator Superfamily DU202_02347 PF03573 outer membrane porin, OprD family DU202_02348 PF00106 short chain dehydrogenase DU202_02349 PF00300 Histidine phosphatase superfamily (branch 1) DU202_02350 PF01636 Phosphotransferase enzyme family DU202_02351 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_02351 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_02351 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02352 PF03466 LysR substrate binding domain DU202_02353 PF01614 Bacterial transcriptional regulator DU202_02353 PF09339 IclR helix-turn-helix domain DU202_02354 PF00753 Metallo-beta-lactamase superfamily DU202_02355 PF04143 DU202_02355 DU202_02356 PF04143 DU202_02356 DU202_02358 PF01011 PQQ enzyme repeat DU202_02359 PF04966 Carbohydrate-selective porin, OprB family DU202_02360 PF13229 Right handed beta helix region DU202_02361 PF01487 Type I 3-dehydroquinase DU202_02362 PF00775 Dioxygenase DU202_02363 PF00775 Dioxygenase DU202_02363 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DU202_02364 PF02627 Carboxymuconolactone decarboxylase family DU202_02365 PF07690 Major Facilitator Superfamily DU202_02366 PF00561 alpha/beta hydrolase fold DU202_02367 PF00206 Lyase DU202_02367 PF10397 Adenylosuccinate lyase C-terminus DU202_02368 PF00108 Thiolase, N-terminal domain DU202_02368 PF02803 Thiolase, C-terminal domain DU202_02369 PF01144 Coenzyme A transferase DU202_02370 PF01144 Coenzyme A transferase DU202_02371 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DU202_02372 PF04977 Septum formation initiator DU202_02373 PF04239 Protein of unknown function (DUF421) DU202_02374 PF00113 Enolase, C-terminal TIM barrel domain DU202_02374 PF03952 Enolase, N-terminal domain DU202_02375 PF00793 DAHP synthetase I family DU202_02376 PF00117 Glutamine amidotransferase class-I DU202_02376 PF06418 CTP synthase N-terminus DU202_02378 PF10118 DU202_02378 DU202_02379 PF12146 Putative lysophospholipase DU202_02380 PF13472 GDSL-like Lipase/Acylhydrolase family DU202_02381 PF12680 SnoaL-like domain DU202_02382 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_02382 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02383 PF03551 Transcriptional regulator PadR-like family DU202_02383 PF10400 Virulence activator alpha C-term DU202_02384 PF12697 Alpha/beta hydrolase family DU202_02385 PF00793 DAHP synthetase I family DU202_02386 PF02694 DU202_02386 DU202_02387 PF00004 ATPase family associated with various cellular activities (AAA) DU202_02387 PF02861 Clp amino terminal domain DU202_02387 PF07724 AAA domain (Cdc48 subfamily) DU202_02387 PF10431 C-terminal, D2-small domain, of ClpB protein DU202_02388 PF02617 ATP-dependent Clp protease adaptor protein ClpS DU202_02390 PF01118 Semialdehyde dehydrogenase, NAD binding domain DU202_02390 PF02774 Semialdehyde dehydrogenase, dimerisation domain DU202_02392 PF01863 Protein of unknown function DUF45 DU202_02393 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DU202_02394 PF00291 Pyridoxal-phosphate dependent enzyme DU202_02394 PF00585 C-terminal regulatory domain of Threonine dehydratase DU202_02395 PF02254 TrkA-N domain DU202_02396 PF02386 Cation transport protein DU202_02397 PF02253 Phospholipase A1 DU202_02398 PF00675 Insulinase (Peptidase family M16) DU202_02398 PF05193 Peptidase M16 inactive domain DU202_02398 PF08367 Peptidase M16C associated DU202_02399 PF00593 TonB dependent receptor DU202_02399 PF07715 TonB-dependent Receptor Plug Domain DU202_02400 PF00294 pfkB family carbohydrate kinase DU202_02401 PF00355 Rieske [2Fe-2S] domain DU202_02402 PF07290 DU202_02402 DU202_02403 PF13737 DU202_02403 DU202_02404 PF13737 DU202_02404 DU202_02406 PF01654 DU202_02406 DU202_02407 PF02322 DU202_02407 DU202_02408 PF08173 DU202_02408 DU202_02409 PF09600 DU202_02409 DU202_02410 PF00583 Acetyltransferase (GNAT) family DU202_02411 PF09829 DU202_02411 DU202_02412 PF00881 Nitroreductase family DU202_02413 PF00448 SRP54-type protein, GTPase domain DU202_02413 PF02881 SRP54-type protein, helical bundle domain DU202_02417 PF11042 DU202_02417 DU202_02418 PF00571 CBS domain DU202_02419 PF00202 Aminotransferase class-III DU202_02420 PF00462 Glutaredoxin DU202_02422 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02422 PF03466 LysR substrate binding domain DU202_02423 PF00557 Metallopeptidase family M24 DU202_02424 PF05525 DU202_02424 DU202_02425 PF03928 Domain of unknown function (DUF336) DU202_02428 PF12146 Putative lysophospholipase DU202_02429 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DU202_02429 PF00381 PTS HPr component phosphorylation site DU202_02429 PF00391 PEP-utilising enzyme, mobile domain DU202_02429 PF02896 PEP-utilising enzyme, TIM barrel domain DU202_02429 PF05524 PEP-utilising enzyme, N-terminal DU202_02430 PF00294 pfkB family carbohydrate kinase DU202_02431 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DU202_02431 PF02378 Phosphotransferase system, EIIC DU202_02434 PF01047 MarR family DU202_02436 PF00563 EAL domain DU202_02436 PF00990 GGDEF domain DU202_02436 PF08447 PAS fold DU202_02436 PF08448 PAS fold DU202_02437 PF00582 Universal stress protein family DU202_02438 PF07995 Glucose / Sorbosone dehydrogenase DU202_02439 PF02586 Uncharacterised ACR, COG2135 DU202_02440 PF00916 DU202_02440 DU202_02440 PF01740 STAS domain DU202_02441 PF00082 Subtilase family DU202_02441 PF05922 Peptidase inhibitor I9 DU202_02443 PF13737 DU202_02443 DU202_02444 PF00324 Amino acid permease DU202_02445 PF00266 Aminotransferase class-V DU202_02446 PF01037 AsnC family DU202_02446 PF13412 Winged helix-turn-helix DNA-binding DU202_02447 PF13302 Acetyltransferase (GNAT) domain DU202_02450 PF05666 DU202_02450 DU202_02451 PF13419 Haloacid dehalogenase-like hydrolase DU202_02452 PF01479 S4 domain DU202_02453 PF00154 recA bacterial DNA recombination protein DU202_02454 PF02631 RecX family DU202_02455 PF13174 Tetratricopeptide repeat DU202_02455 PF16331 DU202_02455 DU202_02456 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_02456 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DU202_02457 PF07977 FabA-like domain DU202_02458 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_02458 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DU202_02458 PF14602 Hexapeptide repeat of succinyl-transferase DU202_02459 PF03938 Outer membrane protein (OmpH-like) DU202_02460 PF01103 Surface antigen DU202_02460 PF07244 Surface antigen variable number repeat DU202_02461 PF02163 Peptidase family M50 DU202_02461 PF13180 PDZ domain DU202_02462 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DU202_02462 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal DU202_02462 PF13288 DXP reductoisomerase C-terminal domain DU202_02463 PF01148 Cytidylyltransferase family DU202_02464 PF01255 Putative undecaprenyl diphosphate synthase DU202_02465 PF01765 Ribosome recycling factor DU202_02466 PF00696 Amino acid kinase family DU202_02467 PF00919 Uncharacterized protein family UPF0004 DU202_02467 PF04055 Radical SAM superfamily DU202_02468 PF00512 His Kinase A (phospho-acceptor) domain DU202_02468 PF00989 PAS fold DU202_02468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_02469 PF00072 Response regulator receiver domain DU202_02469 PF00158 Sigma-54 interaction domain DU202_02469 PF02954 Bacterial regulatory protein, Fis family DU202_02470 PF00440 Bacterial regulatory proteins, tetR family DU202_02472 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DU202_02472 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DU202_02474 PF02542 YgbB family DU202_02476 PF01266 FAD dependent oxidoreductase DU202_02478 PF13737 DU202_02478 DU202_02481 PF00206 Lyase DU202_02481 PF10415 Fumarase C C-terminus DU202_02482 PF01370 NAD dependent epimerase/dehydratase family DU202_02483 PF02635 DsrE/DsrF-like family DU202_02486 PF04358 DsrC like protein DU202_02487 PF00892 EamA-like transporter family DU202_02488 PF00155 Aminotransferase class I and II DU202_02488 PF00392 Bacterial regulatory proteins, gntR family DU202_02489 PF01638 HxlR-like helix-turn-helix DU202_02490 PF00994 Probable molybdopterin binding domain DU202_02490 PF03453 MoeA N-terminal region (domain I and II) DU202_02490 PF03454 MoeA C-terminal region (domain IV) DU202_02491 PF00994 Probable molybdopterin binding domain DU202_02491 PF01967 MoaC family DU202_02492 PF02391 MoaE protein DU202_02493 PF02597 ThiS family DU202_02494 PF04055 Radical SAM superfamily DU202_02494 PF06463 Molybdenum Cofactor Synthesis C DU202_02494 PF13353 4Fe-4S single cluster domain DU202_02495 PF00384 Molybdopterin oxidoreductase DU202_02495 PF01568 Molydopterin dinucleotide binding domain DU202_02495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DU202_02496 PF12804 MobA-like NTP transferase domain DU202_02497 PF00384 Molybdopterin oxidoreductase DU202_02497 PF01568 Molydopterin dinucleotide binding domain DU202_02497 PF04324 BFD-like [2Fe-2S] binding domain DU202_02497 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DU202_02498 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02498 PF13806 Rieske-like [2Fe-2S] domain DU202_02499 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DU202_02499 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DU202_02499 PF04324 BFD-like [2Fe-2S] binding domain DU202_02499 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02501 PF00072 Response regulator receiver domain DU202_02501 PF03861 ANTAR domain DU202_02502 PF13379 NMT1-like family DU202_02503 PF00817 impB/mucB/samB family DU202_02503 PF11799 impB/mucB/samB family C-terminal domain DU202_02503 PF13438 DU202_02503 DU202_02504 PF01220 Dehydroquinase class II DU202_02505 PF00364 Biotin-requiring enzyme DU202_02506 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DU202_02506 PF02785 Biotin carboxylase C-terminal domain DU202_02506 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_02508 PF12832 MFS_1 like family DU202_02510 PF00884 Sulfatase DU202_02510 PF08019 DU202_02510 DU202_02511 PF13737 DU202_02511 DU202_02512 PF03988 DU202_02512 DU202_02513 PF05838 Glycosyl hydrolase 108 DU202_02513 PF09374 Predicted Peptidoglycan domain DU202_02514 PF02498 DU202_02514 DU202_02515 PF03869 Arc-like DNA binding domain DU202_02521 PF13737 DU202_02521 DU202_02528 PF13737 DU202_02528 DU202_02530 PF01464 Transglycosylase SLT domain DU202_02533 PF15919 DU202_02533 DU202_02534 PF07927 YcfA-like protein DU202_02540 PF08239 Bacterial SH3 domain DU202_02542 PF13554 Bacteriophage related domain of unknown function DU202_02546 PF01609 Transposase DDE domain DU202_02547 PF13340 DU202_02547 DU202_02549 PF10281 DU202_02549 DU202_02555 PF04233 DU202_02555 DU202_02556 PF13264 DU202_02556 DU202_02557 PF17289 DU202_02557 DU202_02558 PF10045 DU202_02558 DU202_02563 PF04480 Protein of unknown function (DUF559) DU202_02569 PF04492 DU202_02569 DU202_02572 PF05269 Bacteriophage CII protein DU202_02573 PF14549 DNA-binding transcriptional regulator Cro DU202_02574 PF00717 Peptidase S24-like DU202_02574 PF01381 Helix-turn-helix DU202_02581 PF13479 DU202_02581 DU202_02586 PF06114 Domain of unknown function (DUF955) DU202_02587 PF00589 Phage integrase family DU202_02587 PF13356 Domain of unknown function (DUF4102) DU202_02588 PF14518 Iron-containing redox enzyme DU202_02589 PF00440 Bacterial regulatory proteins, tetR family DU202_02590 PF03929 DU202_02590 DU202_02591 PF01645 Conserved region in glutamate synthase DU202_02592 PF12146 Putative lysophospholipase DU202_02593 PF02698 DUF218 domain DU202_02594 PF01565 FAD binding domain DU202_02594 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DU202_02595 PF01451 Low molecular weight phosphotyrosine protein phosphatase DU202_02596 PF10282 Lactonase, 7-bladed beta-propeller DU202_02597 PF00465 Iron-containing alcohol dehydrogenase DU202_02598 PF13279 Thioesterase-like superfamily DU202_02599 PF04185 Phosphoesterase family DU202_02599 PF05506 DU202_02599 DU202_02601 PF05887 DU202_02601 DU202_02601 PF12169 DNA polymerase III subunits gamma and tau domain III DU202_02601 PF13177 DNA polymerase III, delta subunit DU202_02602 PF07690 Major Facilitator Superfamily DU202_02603 PF00440 Bacterial regulatory proteins, tetR family DU202_02604 PF00144 Beta-lactamase DU202_02605 PF01575 MaoC like domain DU202_02606 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_02607 PF00108 Thiolase, N-terminal domain DU202_02607 PF02803 Thiolase, C-terminal domain DU202_02608 PF05232 DU202_02608 DU202_02609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02609 PF03466 LysR substrate binding domain DU202_02610 PF00923 Transaldolase DU202_02611 PF01810 DU202_02611 DU202_02612 PF01037 AsnC family DU202_02612 PF13412 Winged helix-turn-helix DNA-binding DU202_02613 PF03594 DU202_02613 DU202_02614 PF02308 DU202_02614 DU202_02615 PF00122 E1-E2 ATPase DU202_02615 PF00690 Cation transporter/ATPase, N-terminus DU202_02615 PF00702 haloacid dehalogenase-like hydrolase DU202_02617 PF06271 DU202_02617 DU202_02620 PF00582 Universal stress protein family DU202_02621 PF00005 ABC transporter DU202_02624 PF03922 OmpW family DU202_02625 PF00593 TonB dependent receptor DU202_02625 PF07715 TonB-dependent Receptor Plug Domain DU202_02626 PF13527 Acetyltransferase (GNAT) domain DU202_02630 PF13737 DU202_02630 DU202_02632 PF00924 Mechanosensitive ion channel DU202_02633 PF00593 TonB dependent receptor DU202_02633 PF07715 TonB-dependent Receptor Plug Domain DU202_02634 PF00440 Bacterial regulatory proteins, tetR family DU202_02636 PF13737 DU202_02636 DU202_02637 PF01037 AsnC family DU202_02637 PF13412 Winged helix-turn-helix DNA-binding DU202_02638 PF01817 Chorismate mutase type II DU202_02639 PF00106 short chain dehydrogenase DU202_02640 PF00106 short chain dehydrogenase DU202_02641 PF13417 Glutathione S-transferase, N-terminal domain DU202_02641 PF14497 Glutathione S-transferase, C-terminal domain DU202_02642 PF01433 Peptidase family M1 DU202_02642 PF11940 Domain of unknown function (DUF3458) DU202_02642 PF17432 DU202_02642 DU202_02645 PF02110 Hydroxyethylthiazole kinase family DU202_02646 PF06445 GyrI-like small molecule binding domain DU202_02646 PF12833 Helix-turn-helix domain DU202_02647 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DU202_02648 PF05970 DU202_02648 DU202_02648 PF14493 DU202_02648 DU202_02649 PF00465 Iron-containing alcohol dehydrogenase DU202_02650 PF12146 Putative lysophospholipase DU202_02652 PF00171 Aldehyde dehydrogenase family DU202_02653 PF13520 Amino acid permease DU202_02654 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DU202_02655 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DU202_02656 PF00117 Glutamine amidotransferase class-I DU202_02657 PF00749 tRNA synthetases class I (E and Q), catalytic domain DU202_02657 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DU202_02658 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DU202_02659 PF00149 Calcineurin-like phosphoesterase DU202_02661 PF00881 Nitroreductase family DU202_02662 PF00892 EamA-like transporter family DU202_02663 PF17209 DU202_02663 DU202_02664 PF01715 IPP transferase DU202_02665 PF01119 DNA mismatch repair protein, C-terminal domain DU202_02665 PF08676 MutL C terminal dimerisation domain DU202_02665 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_02666 PF02367 Uncharacterised P-loop hydrolase UPF0079 DU202_02667 PF00849 RNA pseudouridylate synthase DU202_02668 PF04221 RelB antitoxin DU202_02669 PF00583 Acetyltransferase (GNAT) family DU202_02670 PF00849 RNA pseudouridylate synthase DU202_02670 PF01479 S4 domain DU202_02672 PF04284 DU202_02672 DU202_02673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02673 PF03466 LysR substrate binding domain DU202_02674 PF10670 DU202_02674 DU202_02676 PF07690 Major Facilitator Superfamily DU202_02677 PF00520 Ion transport protein DU202_02679 PF00330 Aconitase family (aconitate hydratase) DU202_02679 PF06434 Aconitate hydratase 2 N-terminus DU202_02679 PF11791 Aconitate B N-terminal domain DU202_02681 PF04357 DU202_02681 DU202_02682 PF01103 Surface antigen DU202_02682 PF07244 Surface antigen variable number repeat DU202_02682 PF17243 DU202_02682 DU202_02683 PF07690 Major Facilitator Superfamily DU202_02684 PF03232 DU202_02684 DU202_02685 PF10973 DU202_02685 DU202_02686 PF00120 Glutamine synthetase, catalytic domain DU202_02687 PF00072 Response regulator receiver domain DU202_02687 PF00486 Transcriptional regulatory protein, C terminal DU202_02688 PF00512 His Kinase A (phospho-acceptor) domain DU202_02688 PF00582 Universal stress protein family DU202_02688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_02688 PF02702 Osmosensitive K+ channel His kinase sensor domain DU202_02688 PF13493 Domain of unknown function (DUF4118) DU202_02689 PF02669 DU202_02689 DU202_02690 PF00122 E1-E2 ATPase DU202_02690 PF00702 haloacid dehalogenase-like hydrolase DU202_02691 PF03814 DU202_02691 DU202_02692 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DU202_02693 PF02152 Dihydroneopterin aldolase DU202_02694 PF03109 DU202_02694 DU202_02695 PF00899 ThiF family DU202_02696 PF01613 Flavin reductase like domain DU202_02697 PF00501 AMP-binding enzyme DU202_02697 PF13193 AMP-binding enzyme C-terminal domain DU202_02698 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_02698 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_02698 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02699 PF00106 short chain dehydrogenase DU202_02700 PF12625 DU202_02700 DU202_02700 PF12833 Helix-turn-helix domain DU202_02701 PF09084 NMT1/THI5 like DU202_02702 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02703 PF05175 Methyltransferase small domain DU202_02704 PF00472 RF-1 domain DU202_02704 PF03462 PCRF domain DU202_02705 PF17124 DU202_02705 DU202_02706 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02706 PF03466 LysR substrate binding domain DU202_02709 PF00296 Luciferase-like monooxygenase DU202_02711 PF13994 DU202_02711 DU202_02712 PF13641 Glycosyltransferase like family 2 DU202_02713 PF01522 Polysaccharide deacetylase DU202_02713 PF14883 Hypothetical glycosyl hydrolase family 13 DU202_02715 PF13737 DU202_02715 DU202_02717 PF03618 DU202_02717 DU202_02718 PF00391 PEP-utilising enzyme, mobile domain DU202_02718 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DU202_02718 PF02896 PEP-utilising enzyme, TIM barrel domain DU202_02719 PF06271 DU202_02719 DU202_02719 PF14237 DU202_02719 DU202_02720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DU202_02720 PF06481 COX Aromatic Rich Motif DU202_02721 PF00115 Cytochrome C and Quinol oxidase polypeptide I DU202_02722 PF00510 Cytochrome c oxidase subunit III DU202_02723 PF03626 DU202_02723 DU202_02724 PF01040 UbiA prenyltransferase family DU202_02725 PF01250 Ribosomal protein S6 DU202_02726 PF01084 Ribosomal protein S18 DU202_02727 PF01281 Ribosomal protein L9, N-terminal domain DU202_02727 PF03948 Ribosomal protein L9, C-terminal domain DU202_02728 PF00772 DnaB-like helicase N terminal domain DU202_02728 PF03796 DnaB-like helicase C terminal domain DU202_02729 PF00842 Alanine racemase, C-terminal domain DU202_02729 PF01168 Alanine racemase, N-terminal domain DU202_02730 PF00227 Proteasome subunit DU202_02731 PF01841 Transglutaminase-like superfamily DU202_02731 PF08379 DU202_02731 DU202_02732 PF04168 DU202_02732 DU202_02733 PF14403 DU202_02733 DU202_02734 PF13280 DU202_02734 DU202_02735 PF01134 Glucose inhibited division protein A DU202_02735 PF13932 GidA associated domain 3 DU202_02737 PF06325 Ribosomal protein L11 methyltransferase (PrmA) DU202_02738 PF11906 DU202_02738 DU202_02739 PF02954 Bacterial regulatory protein, Fis family DU202_02740 PF01808 AICARFT/IMPCHase bienzyme DU202_02740 PF02142 MGS-like domain DU202_02741 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DU202_02741 PF02843 Phosphoribosylglycinamide synthetase, C domain DU202_02741 PF02844 Phosphoribosylglycinamide synthetase, N domain DU202_02742 PF03180 NLPA lipoprotein DU202_02743 PF00005 ABC transporter DU202_02743 PF09383 NIL domain DU202_02744 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02745 PF00753 Metallo-beta-lactamase superfamily DU202_02745 PF16123 DU202_02745 DU202_02747 PF00375 Sodium:dicarboxylate symporter family DU202_02748 PF00440 Bacterial regulatory proteins, tetR family DU202_02748 PF16859 DU202_02748 DU202_02749 PF07690 Major Facilitator Superfamily DU202_02750 PF13610 DU202_02750 DU202_02751 PF01051 Initiator Replication protein DU202_02754 PF05717 DU202_02754 DU202_02755 PF03050 DU202_02755 DU202_02755 PF13005 DU202_02755 DU202_02755 PF13007 DU202_02755 DU202_02755 PF13817 DU202_02755 DU202_02757 PF01636 Phosphotransferase enzyme family DU202_02758 PF00005 ABC transporter DU202_02758 PF12848 ABC transporter DU202_02759 PF01609 Transposase DDE domain DU202_02761 PF07091 Ribosomal RNA methyltransferase (FmrO) DU202_02762 PF01609 Transposase DDE domain DU202_02763 PF04986 DU202_02763 DU202_02763 PF14319 DU202_02763 DU202_02764 PF00809 Pterin binding enzyme DU202_02765 PF00893 Small Multidrug Resistance protein DU202_02766 PF01909 Nucleotidyltransferase domain DU202_02766 PF13427 DU202_02766 DU202_02767 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_02768 PF13523 Acetyltransferase (GNAT) domain DU202_02769 PF00589 Phage integrase family DU202_02769 PF13495 Phage integrase, N-terminal SAM-like domain DU202_02770 PF13610 DU202_02770 DU202_02771 PF01636 Phosphotransferase enzyme family DU202_02773 PF13610 DU202_02773 DU202_02774 PF13673 Acetyltransferase (GNAT) domain DU202_02775 PF07995 Glucose / Sorbosone dehydrogenase DU202_02776 PF00892 EamA-like transporter family DU202_02777 PF01177 Asp/Glu/Hydantoin racemase DU202_02778 PF03886 Protein of unknown function (DUF330) DU202_02779 PF02470 DU202_02779 DU202_02780 PF04403 DU202_02780 DU202_02781 PF04403 DU202_02781 DU202_02782 PF02080 TrkA-C domain DU202_02782 PF06826 DU202_02782 DU202_02783 PF00155 Aminotransferase class I and II DU202_02784 PF00892 EamA-like transporter family DU202_02785 PF00440 Bacterial regulatory proteins, tetR family DU202_02786 PF00083 Sugar (and other) transporter DU202_02786 PF08946 Osmosensory transporter coiled coil DU202_02788 PF05229 DU202_02788 DU202_02789 PF00577 Outer membrane usher protein DU202_02789 PF13953 PapC C-terminal domain DU202_02790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DU202_02791 PF05229 DU202_02791 DU202_02792 PF05229 DU202_02792 DU202_02793 PF05229 DU202_02793 DU202_02794 PF13737 DU202_02794 DU202_02795 PF09939 DU202_02795 DU202_02796 PF00324 Amino acid permease DU202_02797 PF00171 Aldehyde dehydrogenase family DU202_02798 PF00202 Aminotransferase class-III DU202_02799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02799 PF03466 LysR substrate binding domain DU202_02804 PF00069 Protein kinase domain DU202_02805 PF01734 Patatin-like phospholipase DU202_02805 PF11815 DU202_02805 DU202_02806 PF05673 Protein of unknown function (DUF815) DU202_02807 PF13737 DU202_02807 DU202_02808 PF05673 Protein of unknown function (DUF815) DU202_02810 PF00814 Glycoprotease family DU202_02811 PF01165 Ribosomal protein S21 DU202_02812 PF09424 Yqey-like protein DU202_02813 PF01435 Peptidase family M48 DU202_02814 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DU202_02814 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DU202_02816 PF01435 Peptidase family M48 DU202_02817 PF00156 Phosphoribosyl transferase domain DU202_02817 PF13522 Glutamine amidotransferase domain DU202_02818 PF02674 DU202_02818 DU202_02819 PF01180 Dihydroorotate dehydrogenase DU202_02820 PF04612 Type II secretion system (T2SS), protein M DU202_02821 PF05134 Type II secretion system (T2SS), protein L DU202_02821 PF12693 GspL periplasmic domain DU202_02823 PF05838 Glycosyl hydrolase 108 DU202_02823 PF09374 Predicted Peptidoglycan domain DU202_02826 PF14897 DU202_02826 DU202_02827 PF13737 DU202_02827 DU202_02837 PF00583 Acetyltransferase (GNAT) family DU202_02844 PF12236 Bacteriophage head to tail connecting protein DU202_02853 PF05866 Endodeoxyribonuclease RusA DU202_02855 PF01695 IstB-like ATP binding protein DU202_02856 PF04492 DU202_02856 DU202_02858 PF14549 DNA-binding transcriptional regulator Cro DU202_02859 PF00717 Peptidase S24-like DU202_02859 PF01381 Helix-turn-helix DU202_02871 PF00589 Phage integrase family DU202_02872 PF00300 Histidine phosphatase superfamily (branch 1) DU202_02873 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DU202_02873 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DU202_02874 PF00881 Nitroreductase family DU202_02876 PF00270 DEAD/DEAH box helicase DU202_02876 PF00271 Helicase conserved C-terminal domain DU202_02877 PF00313 'Cold-shock' DNA-binding domain DU202_02878 PF01206 Sulfurtransferase TusA DU202_02879 PF00140 Sigma-70 factor, region 1 DU202_02879 PF04542 Sigma-70 region 2 DU202_02879 PF04545 Sigma-70, region 4 DU202_02880 PF04241 DU202_02880 DU202_02881 PF02597 ThiS family DU202_02882 PF05690 Thiazole biosynthesis protein ThiG DU202_02884 PF03883 DU202_02884 DU202_02886 PF00753 Metallo-beta-lactamase superfamily DU202_02887 PF01546 Peptidase family M20/M25/M40 DU202_02887 PF07687 Peptidase dimerisation domain DU202_02889 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DU202_02889 PF02153 Prephenate dehydrogenase DU202_02890 PF00800 Prephenate dehydratase DU202_02890 PF01817 Chorismate mutase type II DU202_02890 PF01842 ACT domain DU202_02891 PF00756 Putative esterase DU202_02892 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_02892 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_02892 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02893 PF00375 Sodium:dicarboxylate symporter family DU202_02894 PF00591 Glycosyl transferase family, a/b domain DU202_02894 PF02885 Glycosyl transferase family, helical bundle domain DU202_02895 PF07023 DU202_02895 DU202_02896 PF01513 ATP-NAD kinase DU202_02897 PF00905 Penicillin binding protein transpeptidase domain DU202_02897 PF00912 Transglycosylase DU202_02897 PF14814 Bifunctional transglycosylase second domain DU202_02899 PF00293 NUDIX domain DU202_02899 PF02581 Thiamine monophosphate synthase/TENI DU202_02900 PF10636 Hemin uptake protein hemP DU202_02901 PF00512 His Kinase A (phospho-acceptor) domain DU202_02901 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_02902 PF00072 Response regulator receiver domain DU202_02902 PF00486 Transcriptional regulatory protein, C terminal DU202_02903 PF04076 Bacterial OB fold (BOF) protein DU202_02904 PF00437 Type II/IV secretion system protein DU202_02904 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DU202_02905 PF02308 DU202_02905 DU202_02905 PF13194 DU202_02905 DU202_02906 PF01980 Uncharacterised protein family UPF0066 DU202_02907 PF00175 Oxidoreductase NAD-binding domain DU202_02907 PF00970 Oxidoreductase FAD-binding domain DU202_02908 PF02567 Phenazine biosynthesis-like protein DU202_02909 PF00155 Aminotransferase class I and II DU202_02909 PF00392 Bacterial regulatory proteins, gntR family DU202_02910 PF01136 DU202_02910 DU202_02910 PF16325 DU202_02910 DU202_02912 PF00893 Small Multidrug Resistance protein DU202_02913 PF00005 ABC transporter DU202_02914 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02915 PF00528 Binding-protein-dependent transport system inner membrane component DU202_02916 PF00497 Bacterial extracellular solute-binding proteins, family 3 DU202_02917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_02917 PF03466 LysR substrate binding domain DU202_02919 PF16576 DU202_02919 DU202_02920 PF00873 AcrB/AcrD/AcrF family DU202_02921 PF02321 Outer membrane efflux protein DU202_02922 PF00464 Serine hydroxymethyltransferase DU202_02923 PF05117 DU202_02923 DU202_02923 PF06877 Regulator of ribonuclease activity B DU202_02924 PF03583 Secretory lipase DU202_02925 PF12843 DU202_02925 DU202_02928 PF00005 ABC transporter DU202_02929 PF01061 DU202_02929 DU202_02930 PF14489 QueF-like protein DU202_02930 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DU202_02932 PF01098 DU202_02932 DU202_02933 PF13406 Transglycosylase SLT domain DU202_02934 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel DU202_02935 PF06127 DU202_02935 DU202_02936 PF05437 DU202_02936 DU202_02937 PF03591 DU202_02937 DU202_02938 PF02311 AraC-like ligand binding domain DU202_02938 PF12833 Helix-turn-helix domain DU202_02939 PF11948 DU202_02939 DU202_02940 PF00889 Elongation factor TS DU202_02941 PF00318 Ribosomal protein S2 DU202_02942 PF00557 Metallopeptidase family M24 DU202_02943 PF03922 OmpW family DU202_02944 PF07690 Major Facilitator Superfamily DU202_02945 PF07690 Major Facilitator Superfamily DU202_02947 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DU202_02947 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_02948 PF04055 Radical SAM superfamily DU202_02948 PF16881 DU202_02948 DU202_02949 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_02949 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_02949 PF09317 DU202_02949 DU202_02950 PF02627 Carboxymuconolactone decarboxylase family DU202_02951 PF03412 Peptidase C39 family DU202_02952 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DU202_02952 PF05221 S-adenosyl-L-homocysteine hydrolase DU202_02953 PF02219 Methylenetetrahydrofolate reductase DU202_02954 PF04452 RNA methyltransferase DU202_02955 PF08447 PAS fold DU202_02956 PF13737 DU202_02956 DU202_02957 PF00563 EAL domain DU202_02957 PF00989 PAS fold DU202_02957 PF00990 GGDEF domain DU202_02958 PF00390 Malic enzyme, N-terminal domain DU202_02958 PF01515 Phosphate acetyl/butaryl transferase DU202_02958 PF03949 Malic enzyme, NAD binding domain DU202_02959 PF01743 Poly A polymerase head domain DU202_02959 PF12627 Probable RNA and SrmB- binding site of polymerase A DU202_02960 PF13180 PDZ domain DU202_02960 PF13365 Trypsin-like peptidase domain DU202_02961 PF01784 NIF3 (NGG1p interacting factor 3) DU202_02962 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DU202_02962 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DU202_02966 PF10881 DU202_02966 DU202_02968 PF03583 Secretory lipase DU202_02969 PF01040 UbiA prenyltransferase family DU202_02970 PF04345 Chorismate lyase DU202_02971 PF00120 Glutamine synthetase, catalytic domain DU202_02971 PF03951 Glutamine synthetase, beta-Grasp domain DU202_02972 PF00854 POT family DU202_02973 PF00557 Metallopeptidase family M24 DU202_02973 PF01321 Creatinase/Prolidase N-terminal domain DU202_02973 PF16188 DU202_02973 DU202_02973 PF16189 DU202_02973 DU202_02974 PF00589 Phage integrase family DU202_02974 PF13356 Domain of unknown function (DUF4102) DU202_02976 PF05838 Glycosyl hydrolase 108 DU202_02976 PF09374 Predicted Peptidoglycan domain DU202_02986 PF06120 DU202_02986 DU202_02987 PF04383 KilA-N domain DU202_02988 PF03869 Arc-like DNA binding domain DU202_02989 PF03869 Arc-like DNA binding domain DU202_02991 PF14020 DU202_02991 DU202_02992 PF12844 Helix-turn-helix domain DU202_02993 PF14076 DU202_02993 DU202_02999 PF13554 Bacteriophage related domain of unknown function DU202_03004 PF10281 DU202_03004 DU202_03007 PF13876 DU202_03007 DU202_03008 PF04233 DU202_03008 DU202_03009 PF13264 DU202_03009 DU202_03010 PF17289 DU202_03010 DU202_03011 PF10045 DU202_03011 DU202_03017 PF04480 Protein of unknown function (DUF559) DU202_03022 PF01695 IstB-like ATP binding protein DU202_03029 PF00717 Peptidase S24-like DU202_03029 PF01381 Helix-turn-helix DU202_03038 PF13479 DU202_03038 DU202_03045 PF00117 Glutamine amidotransferase class-I DU202_03046 PF01433 Peptidase family M1 DU202_03046 PF11838 ERAP1-like C-terminal domain DU202_03047 PF01609 Transposase DDE domain DU202_03048 PF01609 Transposase DDE domain DU202_03049 PF00593 TonB dependent receptor DU202_03049 PF07715 TonB-dependent Receptor Plug Domain DU202_03050 PF00591 Glycosyl transferase family, a/b domain DU202_03050 PF02885 Glycosyl transferase family, helical bundle domain DU202_03051 PF00218 Indole-3-glycerol phosphate synthase DU202_03052 PF01713 Smr domain DU202_03053 PF02625 XdhC and CoxI family DU202_03053 PF13478 XdhC Rossmann domain DU202_03054 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DU202_03054 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DU202_03055 PF00941 FAD binding domain in molybdopterin dehydrogenase DU202_03055 PF01799 [2Fe-2S] binding domain DU202_03055 PF03450 CO dehydrogenase flavoprotein C-terminal domain DU202_03056 PF01227 GTP cyclohydrolase I DU202_03057 PF01609 Transposase DDE domain DU202_03058 PF01609 Transposase DDE domain DU202_03059 PF00144 Beta-lactamase DU202_03060 PF13387 DU202_03060 DU202_03061 PF13387 DU202_03061 DU202_03062 PF11220 DU202_03062 DU202_03063 PF05675 DU202_03063 DU202_03064 PF01208 Uroporphyrinogen decarboxylase (URO-D) DU202_03065 PF01471 Putative peptidoglycan binding domain DU202_03065 PF03734 L,D-transpeptidase catalytic domain DU202_03066 PF00425 chorismate binding enzyme DU202_03067 PF01648 4'-phosphopantetheinyl transferase superfamily DU202_03068 PF00975 Thioesterase domain DU202_03069 PF00005 ABC transporter DU202_03069 PF00664 ABC transporter transmembrane region DU202_03070 PF00005 ABC transporter DU202_03070 PF00664 ABC transporter transmembrane region DU202_03072 PF00282 Pyridoxal-dependent decarboxylase conserved domain DU202_03073 PF00550 Phosphopantetheine attachment site DU202_03073 PF00857 Isochorismatase family DU202_03074 PF00501 AMP-binding enzyme DU202_03074 PF13193 AMP-binding enzyme C-terminal domain DU202_03075 PF00668 Condensation domain DU202_03076 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DU202_03077 PF00593 TonB dependent receptor DU202_03077 PF07715 TonB-dependent Receptor Plug Domain DU202_03078 PF01497 Periplasmic binding protein DU202_03079 PF00005 ABC transporter DU202_03080 PF01032 FecCD transport family DU202_03081 PF01032 FecCD transport family DU202_03083 PF00550 Phosphopantetheine attachment site DU202_03083 PF00668 Condensation domain DU202_03084 PF00501 AMP-binding enzyme DU202_03084 PF13193 AMP-binding enzyme C-terminal domain DU202_03085 PF04954 Siderophore-interacting protein DU202_03085 PF08021 Siderophore-interacting FAD-binding domain DU202_03086 PF08348 DU202_03086 DU202_03086 PF13309 DU202_03086 DU202_03087 PF00291 Pyridoxal-phosphate dependent enzyme DU202_03088 PF00291 Pyridoxal-phosphate dependent enzyme DU202_03089 PF02678 Pirin DU202_03090 PF00440 Bacterial regulatory proteins, tetR family DU202_03091 PF00440 Bacterial regulatory proteins, tetR family DU202_03092 PF00440 Bacterial regulatory proteins, tetR family DU202_03093 PF00107 Zinc-binding dehydrogenase DU202_03093 PF08240 Alcohol dehydrogenase GroES-like domain DU202_03094 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DU202_03094 PF13378 Enolase C-terminal domain-like DU202_03095 PF00083 Sugar (and other) transporter DU202_03096 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DU202_03097 PF00892 EamA-like transporter family DU202_03098 PF00892 EamA-like transporter family DU202_03099 PF01914 DU202_03099 DU202_03101 PF06249 Ethanolamine utilisation protein EutQ DU202_03102 PF01266 FAD dependent oxidoreductase DU202_03103 PF00301 Rubredoxin DU202_03103 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_03104 PF00171 Aldehyde dehydrogenase family DU202_03105 PF00355 Rieske [2Fe-2S] domain DU202_03105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DU202_03106 PF02028 BCCT family transporter DU202_03107 PF13737 DU202_03107 DU202_03108 PF02028 BCCT family transporter DU202_03109 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03109 PF03466 LysR substrate binding domain DU202_03110 PF00324 Amino acid permease DU202_03111 PF00171 Aldehyde dehydrogenase family DU202_03112 PF05899 Protein of unknown function (DUF861) DU202_03113 PF01266 FAD dependent oxidoreductase DU202_03114 PF07905 DU202_03114 DU202_03114 PF13556 PucR C-terminal helix-turn-helix domain DU202_03115 PF00440 Bacterial regulatory proteins, tetR family DU202_03116 PF03374 DU202_03116 DU202_03121 PF04328 DU202_03121 DU202_03122 PF02554 DU202_03122 DU202_03122 PF13722 DU202_03122 DU202_03123 PF01132 Elongation factor P (EF-P) OB domain DU202_03123 PF08207 Elongation factor P (EF-P) KOW-like domain DU202_03123 PF09285 Elongation factor P, C-terminal DU202_03124 PF04055 Radical SAM superfamily DU202_03124 PF13394 4Fe-4S single cluster domain DU202_03126 PF00563 EAL domain DU202_03127 PF01197 Ribosomal protein L31 DU202_03128 PF13593 SBF-like CPA transporter family (DUF4137) DU202_03129 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DU202_03130 PF07690 Major Facilitator Superfamily DU202_03131 PF05362 Lon protease (S16) C-terminal proteolytic domain DU202_03131 PF13654 AAA domain DU202_03132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03132 PF03466 LysR substrate binding domain DU202_03133 PF01476 LysM domain DU202_03133 PF01551 Peptidase family M23 DU202_03134 PF01975 Survival protein SurE DU202_03137 PF00768 D-alanyl-D-alanine carboxypeptidase DU202_03137 PF07943 Penicillin-binding protein 5, C-terminal domain DU202_03138 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_03139 PF00293 NUDIX domain DU202_03140 PF03054 tRNA methyl transferase DU202_03141 PF04356 Protein of unknown function (DUF489) DU202_03142 PF00206 Lyase DU202_03142 PF08328 Adenylosuccinate lyase C-terminal DU202_03143 PF09997 DU202_03143 DU202_03145 PF01343 Peptidase family S49 DU202_03145 PF08496 DU202_03145 DU202_03146 PF00005 ABC transporter DU202_03147 PF00528 Binding-protein-dependent transport system inner membrane component DU202_03147 PF11812 DU202_03147 DU202_03148 PF00528 Binding-protein-dependent transport system inner membrane component DU202_03148 PF12501 DU202_03148 DU202_03149 PF12849 PBP superfamily domain DU202_03150 PF00324 Amino acid permease DU202_03151 PF00205 Thiamine pyrophosphate enzyme, central domain DU202_03151 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DU202_03151 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DU202_03152 PF01037 AsnC family DU202_03152 PF13404 AsnC-type helix-turn-helix domain DU202_03153 PF00171 Aldehyde dehydrogenase family DU202_03154 PF00282 Pyridoxal-dependent decarboxylase conserved domain DU202_03155 PF00202 Aminotransferase class-III DU202_03156 PF04402 Protein of unknown function (DUF541) DU202_03157 PF00440 Bacterial regulatory proteins, tetR family DU202_03158 PF14539 Domain of unknown function (DUF4442) DU202_03159 PF00487 DU202_03159 DU202_03160 PF00175 Oxidoreductase NAD-binding domain DU202_03160 PF00970 Oxidoreductase FAD-binding domain DU202_03161 PF00440 Bacterial regulatory proteins, tetR family DU202_03162 PF01594 DU202_03162 DU202_03163 PF00176 SNF2 family N-terminal domain DU202_03163 PF00271 Helicase conserved C-terminal domain DU202_03163 PF12137 RNA polymerase recycling family C-terminal DU202_03164 PF00849 RNA pseudouridylate synthase DU202_03166 PF00202 Aminotransferase class-III DU202_03167 PF02581 Thiamine monophosphate synthase/TENI DU202_03168 PF06127 DU202_03168 DU202_03169 PF01928 CYTH domain DU202_03169 PF05235 CHAD domain DU202_03171 PF11342 Protein of unknown function (DUF3144) DU202_03172 PF00675 Insulinase (Peptidase family M16) DU202_03172 PF05193 Peptidase M16 inactive domain DU202_03173 PF02567 Phenazine biosynthesis-like protein DU202_03174 PF00375 Sodium:dicarboxylate symporter family DU202_03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03175 PF03466 LysR substrate binding domain DU202_03176 PF06779 DU202_03176 DU202_03179 PF00180 Isocitrate/isopropylmalate dehydrogenase DU202_03180 PF00849 RNA pseudouridylate synthase DU202_03181 PF03971 Monomeric isocitrate dehydrogenase DU202_03182 PF05299 M61 glycyl aminopeptidase DU202_03183 PF00768 D-alanyl-D-alanine carboxypeptidase DU202_03184 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_03185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DU202_03186 PF00875 DNA photolyase DU202_03186 PF03441 FAD binding domain of DNA photolyase DU202_03189 PF13641 Glycosyltransferase like family 2 DU202_03192 PF02350 UDP-N-acetylglucosamine 2-epimerase DU202_03194 PF01988 DU202_03194 DU202_03195 PF03060 Nitronate monooxygenase DU202_03196 PF01207 Dihydrouridine synthase (Dus) DU202_03197 PF07759 DU202_03197 DU202_03198 PF12710 haloacid dehalogenase-like hydrolase DU202_03199 PF00696 Amino acid kinase family DU202_03199 PF01472 PUA domain DU202_03200 PF01018 GTP1/OBG DU202_03200 PF01926 50S ribosome-binding GTPase DU202_03203 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DU202_03203 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DU202_03204 PF00892 EamA-like transporter family DU202_03205 PF08212 Lipocalin-like domain DU202_03206 PF00271 Helicase conserved C-terminal domain DU202_03206 PF02151 UvrB/uvrC motif DU202_03206 PF04851 Type III restriction enzyme, res subunit DU202_03206 PF12344 Ultra-violet resistance protein B DU202_03208 PF00990 GGDEF domain DU202_03208 PF13188 PAS domain DU202_03210 PF00155 Aminotransferase class I and II DU202_03211 PF04828 Glutathione-dependent formaldehyde-activating enzyme DU202_03212 PF03061 Thioesterase superfamily DU202_03215 PF00106 short chain dehydrogenase DU202_03216 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DU202_03217 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DU202_03218 PF02565 Recombination protein O C terminal DU202_03218 PF11967 Recombination protein O N terminal DU202_03220 PF01926 50S ribosome-binding GTPase DU202_03220 PF07650 KH domain DU202_03221 PF00035 Double-stranded RNA binding motif DU202_03221 PF14622 Ribonuclease-III-like DU202_03222 PF16137 DU202_03222 DU202_03223 PF00717 Peptidase S24-like DU202_03223 PF10502 Signal peptidase, peptidase S26 DU202_03224 PF00009 Elongation factor Tu GTP binding domain DU202_03224 PF00679 Elongation factor G C-terminus DU202_03224 PF03144 Elongation factor Tu domain 2 DU202_03224 PF06421 GTP-binding protein LepA C-terminus DU202_03225 PF13279 Thioesterase-like superfamily DU202_03226 PF13180 PDZ domain DU202_03226 PF13365 Trypsin-like peptidase domain DU202_03227 PF00890 FAD binding domain DU202_03227 PF02910 Fumarate reductase flavoprotein C-term DU202_03228 PF03061 Thioesterase superfamily DU202_03229 PF02223 Thymidylate kinase DU202_03230 PF02618 YceG-like family DU202_03231 PF01063 Aminotransferase class IV DU202_03232 PF13531 Bacterial extracellular solute-binding protein DU202_03233 PF06821 Serine hydrolase DU202_03234 PF00528 Binding-protein-dependent transport system inner membrane component DU202_03235 PF00528 Binding-protein-dependent transport system inner membrane component DU202_03236 PF00005 ABC transporter DU202_03236 PF12857 DU202_03236 DU202_03237 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03237 PF03466 LysR substrate binding domain DU202_03239 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_03239 PF14602 Hexapeptide repeat of succinyl-transferase DU202_03239 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DU202_03240 PF04055 Radical SAM superfamily DU202_03240 PF13394 4Fe-4S single cluster domain DU202_03241 PF06508 Queuosine biosynthesis protein QueC DU202_03243 PF01902 ATP-binding region DU202_03244 PF00578 AhpC/TSA family DU202_03245 PF00188 Cysteine-rich secretory protein family DU202_03246 PF01467 Cytidylyltransferase DU202_03247 PF00378 Enoyl-CoA hydratase/isomerase family DU202_03250 PF07690 Major Facilitator Superfamily DU202_03251 PF02769 AIR synthase related protein, C-terminal domain DU202_03251 PF13507 CobB/CobQ-like glutamine amidotransferase domain DU202_03252 PF01966 HD domain DU202_03253 PF01330 RuvA N terminal domain DU202_03253 PF07499 RuvA, C-terminal domain DU202_03253 PF14520 Helix-hairpin-helix domain DU202_03254 PF05491 Holliday junction DNA helicase ruvB C-terminus DU202_03254 PF05496 Holliday junction DNA helicase ruvB N-terminus DU202_03255 PF01546 Peptidase family M20/M25/M40 DU202_03255 PF07687 Peptidase dimerisation domain DU202_03256 PF03061 Thioesterase superfamily DU202_03257 PF01618 DU202_03257 DU202_03258 PF02472 Biopolymer transport protein ExbD/TolR DU202_03259 PF13103 TonB C terminal DU202_03260 PF04052 TolB amino-terminal domain DU202_03260 PF07676 WD40-like Beta Propeller Repeat DU202_03261 PF00691 OmpA family DU202_03263 PF00316 Fructose-1-6-bisphosphatase DU202_03264 PF00588 SpoU rRNA Methylase family DU202_03265 PF04542 Sigma-70 region 2 DU202_03265 PF08281 Sigma-70, region 4 DU202_03267 PF11304 DU202_03267 DU202_03270 PF00308 Bacterial dnaA protein DU202_03271 PF01594 DU202_03271 DU202_03272 PF00586 AIR synthase related protein, N-terminal domain DU202_03272 PF02769 AIR synthase related protein, C-terminal domain DU202_03273 PF00551 Formyl transferase DU202_03274 PF12697 Alpha/beta hydrolase family DU202_03275 PF01343 Peptidase family S49 DU202_03276 PF03279 DU202_03276 DU202_03277 PF00753 Metallo-beta-lactamase superfamily DU202_03277 PF03772 DU202_03277 DU202_03277 PF13567 DU202_03277 DU202_03278 PF00005 ABC transporter DU202_03279 PF02687 DU202_03279 DU202_03279 PF12704 MacB-like periplasmic core domain DU202_03280 PF00892 EamA-like transporter family DU202_03281 PF02639 DU202_03281 DU202_03284 PF00266 Aminotransferase class-V DU202_03285 PF02321 Outer membrane efflux protein DU202_03286 PF16576 DU202_03286 DU202_03287 PF12698 ABC-2 family transporter protein DU202_03288 PF12698 ABC-2 family transporter protein DU202_03289 PF04794 YdjC-like protein DU202_03290 PF00535 Glycosyl transferase family 2 DU202_03291 PF04138 DU202_03291 DU202_03292 PF13231 DU202_03292 DU202_03293 PF00521 DNA gyrase/topoisomerase IV, subunit A DU202_03293 PF03989 DNA gyrase C-terminal domain, beta-propeller DU202_03294 PF00766 Electron transfer flavoprotein FAD-binding domain DU202_03294 PF01012 Electron transfer flavoprotein domain DU202_03295 PF01012 Electron transfer flavoprotein domain DU202_03296 PF00589 Phage integrase family DU202_03296 PF02899 Phage integrase, N-terminal SAM-like domain DU202_03297 PF01810 DU202_03297 DU202_03298 PF01678 Diaminopimelate epimerase DU202_03299 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DU202_03299 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DU202_03301 PF00324 Amino acid permease DU202_03302 PF06745 KaiC DU202_03302 PF13541 Subunit ChlI of Mg-chelatase DU202_03303 PF04280 Tim44-like domain DU202_03304 PF00152 tRNA synthetases class II (D, K and N) DU202_03305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DU202_03305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DU202_03305 PF11890 Domain of unknown function (DUF3410) DU202_03306 PF06803 DU202_03306 DU202_03307 PF02634 FdhD/NarQ family DU202_03308 PF00384 Molybdopterin oxidoreductase DU202_03308 PF01568 Molydopterin dinucleotide binding domain DU202_03309 PF02595 Glycerate kinase family DU202_03310 PF00440 Bacterial regulatory proteins, tetR family DU202_03311 PF00106 short chain dehydrogenase DU202_03312 PF00881 Nitroreductase family DU202_03313 PF00440 Bacterial regulatory proteins, tetR family DU202_03314 PF10118 DU202_03314 DU202_03315 PF00440 Bacterial regulatory proteins, tetR family DU202_03316 PF14534 Domain of unknown function (DUF4440) DU202_03318 PF01272 Transcription elongation factor, GreA/GreB, C-term DU202_03318 PF03449 Transcription elongation factor, N-terminal DU202_03319 PF00497 Bacterial extracellular solute-binding proteins, family 3 DU202_03319 PF01464 Transglycosylase SLT domain DU202_03320 PF02036 SCP-2 sterol transfer family DU202_03321 PF01171 PP-loop family DU202_03322 PF01464 Transglycosylase SLT domain DU202_03323 PF01435 Peptidase family M48 DU202_03324 PF13430 DU202_03324 DU202_03325 PF00873 AcrB/AcrD/AcrF family DU202_03326 PF03009 Glycerophosphoryl diester phosphodiesterase family DU202_03327 PF00753 Metallo-beta-lactamase superfamily DU202_03328 PF01219 Prokaryotic diacylglycerol kinase DU202_03329 PF00118 TCP-1/cpn60 chaperonin family DU202_03330 PF00166 Chaperonin 10 Kd subunit DU202_03331 PF12245 Bacterial Ig-like domain (group 3) DU202_03332 PF13737 DU202_03332 DU202_03333 PF12245 Bacterial Ig-like domain (group 3) DU202_03334 PF13737 DU202_03334 DU202_03335 PF00149 Calcineurin-like phosphoesterase DU202_03337 PF13737 DU202_03337 DU202_03338 PF00781 Diacylglycerol kinase catalytic domain DU202_03339 PF00821 Phosphoenolpyruvate carboxykinase DU202_03339 PF17297 DU202_03339 DU202_03340 PF01266 FAD dependent oxidoreductase DU202_03340 PF16901 DU202_03340 DU202_03341 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DU202_03341 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DU202_03342 PF00083 Sugar (and other) transporter DU202_03344 PF06325 Ribosomal protein L11 methyltransferase (PrmA) DU202_03345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DU202_03345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DU202_03348 PF09423 PhoD-like phosphatase DU202_03348 PF16655 DU202_03348 DU202_03352 PF00809 Pterin binding enzyme DU202_03353 PF00004 ATPase family associated with various cellular activities (AAA) DU202_03353 PF01434 Peptidase family M41 DU202_03353 PF06480 FtsH Extracellular DU202_03354 PF01728 FtsJ-like methyltransferase DU202_03355 PF01985 CRS1 / YhbY (CRM) domain DU202_03358 PF00117 Glutamine amidotransferase class-I DU202_03358 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DU202_03359 PF02142 MGS-like domain DU202_03359 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_03359 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DU202_03360 PF01272 Transcription elongation factor, GreA/GreB, C-term DU202_03360 PF03449 Transcription elongation factor, N-terminal DU202_03361 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_03362 PF00582 Universal stress protein family DU202_03363 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DU202_03365 PF09587 Bacterial capsule synthesis protein PGA_cap DU202_03367 PF13737 DU202_03367 DU202_03370 PF00999 Sodium/hydrogen exchanger family DU202_03371 PF04228 DU202_03371 DU202_03372 PF05661 DU202_03372 DU202_03373 PF00579 tRNA synthetases class I (W and Y) DU202_03374 PF00549 CoA-ligase DU202_03374 PF02629 CoA binding domain DU202_03375 PF00549 CoA-ligase DU202_03375 PF08442 ATP-grasp domain DU202_03376 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DU202_03376 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_03377 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DU202_03377 PF00364 Biotin-requiring enzyme DU202_03377 PF02817 e3 binding domain DU202_03378 PF00676 Dehydrogenase E1 component DU202_03378 PF02779 Transketolase, pyrimidine binding domain DU202_03378 PF16078 DU202_03378 DU202_03378 PF16870 DU202_03378 DU202_03379 PF13085 2Fe-2S iron-sulfur cluster binding domain DU202_03379 PF13534 4Fe-4S dicluster domain DU202_03380 PF00890 FAD binding domain DU202_03380 PF02910 Fumarate reductase flavoprotein C-term DU202_03381 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DU202_03382 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DU202_03383 PF00285 Citrate synthase DU202_03384 PF06945 DU202_03384 DU202_03385 PF00581 Rhodanese-like domain DU202_03387 PF03695 Uncharacterised protein family (UPF0149) DU202_03389 PF00140 Sigma-70 factor, region 1 DU202_03389 PF03979 Sigma-70 factor, region 1 DU202_03389 PF04539 Sigma-70 region 3 DU202_03389 PF04542 Sigma-70 region 2 DU202_03389 PF04545 Sigma-70, region 4 DU202_03389 PF04546 Sigma-70, non-essential region DU202_03390 PF04359 Protein of unknown function (DUF493) DU202_03391 PF03099 Biotin/lipoate A/B protein ligase family DU202_03393 PF00465 Iron-containing alcohol dehydrogenase DU202_03394 PF00324 Amino acid permease DU202_03395 PF12724 Flavodoxin domain DU202_03396 PF01638 HxlR-like helix-turn-helix DU202_03397 PF00588 SpoU rRNA Methylase family DU202_03398 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DU202_03398 PF10414 Sirohaem synthase dimerisation region DU202_03398 PF13241 Putative NAD(P)-binding DU202_03399 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DU202_03399 PF02403 Seryl-tRNA synthetase N-terminal domain DU202_03400 PF11738 Protein of unknown function (DUF3298) DU202_03401 PF03548 Outer membrane lipoprotein carrier protein LolA DU202_03402 PF01016 Ribosomal L27 protein DU202_03403 PF00829 Ribosomal prokaryotic L21 protein DU202_03404 PF00348 Polyprenyl synthetase DU202_03405 PF10136 DU202_03405 DU202_03407 PF01609 Transposase DDE domain DU202_03408 PF01609 Transposase DDE domain DU202_03409 PF01609 Transposase DDE domain DU202_03410 PF01609 Transposase DDE domain DU202_03411 PF00529 HlyD family secretion protein DU202_03411 PF16576 DU202_03411 DU202_03412 PF00873 AcrB/AcrD/AcrF family DU202_03413 PF02321 Outer membrane efflux protein DU202_03414 PF01906 Putative heavy-metal-binding DU202_03415 PF01906 Putative heavy-metal-binding DU202_03416 PF13577 SnoaL-like domain DU202_03417 PF00106 short chain dehydrogenase DU202_03419 PF00133 tRNA synthetases class I (I, L, M and V) DU202_03419 PF08264 Anticodon-binding domain of tRNA DU202_03419 PF10458 Valyl tRNA synthetase tRNA binding arm DU202_03420 PF13649 Methyltransferase domain DU202_03422 PF03547 DU202_03422 DU202_03423 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03423 PF03466 LysR substrate binding domain DU202_03424 PF00909 Ammonium Transporter Family DU202_03425 PF01569 PAP2 superfamily DU202_03426 PF00512 His Kinase A (phospho-acceptor) domain DU202_03426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03427 PF00072 Response regulator receiver domain DU202_03427 PF00486 Transcriptional regulatory protein, C terminal DU202_03428 PF00884 Sulfatase DU202_03428 PF08019 DU202_03428 DU202_03429 PF02530 DU202_03429 DU202_03430 PF13000 DU202_03430 DU202_03431 PF01553 Acyltransferase DU202_03432 PF01734 Patatin-like phospholipase DU202_03433 PF01957 NfeD-like C-terminal, partner-binding DU202_03434 PF01145 SPFH domain / Band 7 family DU202_03435 PF04237 YjbR DU202_03436 PF00348 Polyprenyl synthetase DU202_03437 PF04303 PrpF protein DU202_03438 PF00324 Amino acid permease DU202_03440 PF01965 DJ-1/PfpI family DU202_03441 PF00107 Zinc-binding dehydrogenase DU202_03441 PF08240 Alcohol dehydrogenase GroES-like domain DU202_03442 PF06719 DU202_03442 DU202_03442 PF12833 Helix-turn-helix domain DU202_03443 PF13737 DU202_03443 DU202_03444 PF06719 DU202_03444 DU202_03445 PF02673 DU202_03445 DU202_03446 PF08223 PaaX-like protein C-terminal domain DU202_03447 PF00487 DU202_03447 DU202_03448 PF12625 DU202_03448 DU202_03448 PF12833 Helix-turn-helix domain DU202_03449 PF13340 DU202_03449 DU202_03450 PF01609 Transposase DDE domain DU202_03451 PF02525 Flavodoxin-like fold DU202_03452 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DU202_03453 PF12710 haloacid dehalogenase-like hydrolase DU202_03454 PF01507 Phosphoadenosine phosphosulfate reductase family DU202_03455 PF03007 DU202_03455 DU202_03455 PF06974 DU202_03455 DU202_03457 PF00575 S1 RNA binding domain DU202_03457 PF10150 Ribonuclease E/G family DU202_03458 PF02545 Maf-like protein DU202_03459 PF04093 DU202_03459 DU202_03460 PF04085 rod shape-determining protein MreC DU202_03461 PF06723 MreB/Mbl protein DU202_03462 PF02686 Glu-tRNAGln amidotransferase C subunit DU202_03463 PF01425 Amidase DU202_03464 PF02637 GatB domain DU202_03464 PF02934 GatB/GatE catalytic domain DU202_03466 PF13737 DU202_03466 DU202_03468 PF01965 DJ-1/PfpI family DU202_03470 PF06674 DU202_03470 DU202_03471 PF16142 DU202_03471 DU202_03472 PF05992 DU202_03472 DU202_03473 PF00291 Pyridoxal-phosphate dependent enzyme DU202_03474 PF01734 Patatin-like phospholipase DU202_03475 PF01235 DU202_03475 DU202_03477 PF00881 Nitroreductase family DU202_03478 PF07690 Major Facilitator Superfamily DU202_03479 PF12805 DU202_03479 DU202_03479 PF13515 DU202_03479 DU202_03480 PF14317 DU202_03480 DU202_03481 PF00175 Oxidoreductase NAD-binding domain DU202_03481 PF00258 Flavodoxin DU202_03481 PF03929 DU202_03481 DU202_03482 PF02698 DUF218 domain DU202_03489 PF03734 L,D-transpeptidase catalytic domain DU202_03490 PF04304 DU202_03490 DU202_03491 PF08907 DU202_03491 DU202_03492 PF08085 DU202_03492 DU202_03493 PF01546 Peptidase family M20/M25/M40 DU202_03493 PF07687 Peptidase dimerisation domain DU202_03495 PF00072 Response regulator receiver domain DU202_03495 PF01584 CheW-like domain DU202_03495 PF01627 Hpt domain DU202_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DU202_03497 PF01584 CheW-like domain DU202_03498 PF00072 Response regulator receiver domain DU202_03499 PF00072 Response regulator receiver domain DU202_03501 PF13437 HlyD family secretion protein DU202_03501 PF13533 Biotin-lipoyl like DU202_03502 PF00873 AcrB/AcrD/AcrF family DU202_03503 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DU202_03503 PF03129 Anticodon binding domain DU202_03503 PF04073 Aminoacyl-tRNA editing domain DU202_03504 PF07411 Domain of unknown function (DUF1508) DU202_03505 PF03831 PhnA protein DU202_03505 PF08274 PhnA Zinc-Ribbon DU202_03506 PF04343 DU202_03506 DU202_03507 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DU202_03508 PF01571 Aminomethyltransferase folate-binding domain DU202_03509 PF10411 Disulfide bond isomerase protein N-terminus DU202_03509 PF13098 Thioredoxin-like domain DU202_03510 PF08238 Sel1 repeat DU202_03511 PF03547 DU202_03511 DU202_03512 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_03513 PF00593 TonB dependent receptor DU202_03513 PF07715 TonB-dependent Receptor Plug Domain DU202_03514 PF02245 Methylpurine-DNA glycosylase (MPG) DU202_03515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DU202_03515 PF06827 Zinc finger found in FPG and IleRS DU202_03515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DU202_03516 PF00639 PPIC-type PPIASE domain DU202_03517 PF06094 AIG2-like family DU202_03518 PF01741 Large-conductance mechanosensitive channel, MscL DU202_03519 PF00009 Elongation factor Tu GTP binding domain DU202_03519 PF00679 Elongation factor G C-terminus DU202_03519 PF03144 Elongation factor Tu domain 2 DU202_03520 PF00860 Permease family DU202_03521 PF05175 Methyltransferase small domain DU202_03521 PF08468 Methyltransferase small domain N-terminal DU202_03522 PF00324 Amino acid permease DU202_03523 PF01139 tRNA-splicing ligase RtcB DU202_03525 PF00691 OmpA family DU202_03525 PF13505 Outer membrane protein beta-barrel domain DU202_03526 PF12019 Type II transport protein GspH DU202_03527 PF00108 Thiolase, N-terminal domain DU202_03527 PF02803 Thiolase, C-terminal domain DU202_03529 PF13737 DU202_03529 DU202_03530 PF00893 Small Multidrug Resistance protein DU202_03531 PF06073 DU202_03531 DU202_03532 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DU202_03532 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DU202_03533 PF01011 PQQ enzyme repeat DU202_03533 PF13360 PQQ-like domain DU202_03534 PF04966 Carbohydrate-selective porin, OprB family DU202_03535 PF02515 CoA-transferase family III DU202_03536 PF12625 DU202_03536 DU202_03536 PF12833 Helix-turn-helix domain DU202_03537 PF00108 Thiolase, N-terminal domain DU202_03537 PF02803 Thiolase, C-terminal domain DU202_03538 PF00378 Enoyl-CoA hydratase/isomerase family DU202_03538 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DU202_03538 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DU202_03540 PF01734 Patatin-like phospholipase DU202_03541 PF13673 Acetyltransferase (GNAT) domain DU202_03542 PF13679 DU202_03542 DU202_03544 PF03006 DU202_03544 DU202_03545 PF00083 Sugar (and other) transporter DU202_03547 PF01043 SecA preprotein cross-linking domain DU202_03547 PF02810 SEC-C motif DU202_03547 PF07516 SecA Wing and Scaffold domain DU202_03547 PF07517 SecA DEAD-like domain DU202_03548 PF00578 AhpC/TSA family DU202_03548 PF10417 C-terminal domain of 1-Cys peroxiredoxin DU202_03549 PF00753 Metallo-beta-lactamase superfamily DU202_03550 PF00782 Dual specificity phosphatase, catalytic domain DU202_03551 PF05036 Sporulation related domain DU202_03552 PF08245 Mur ligase middle domain DU202_03553 PF01039 Carboxyl transferase domain DU202_03554 PF00290 Tryptophan synthase alpha chain DU202_03555 PF12625 DU202_03555 DU202_03555 PF12833 Helix-turn-helix domain DU202_03556 PF10118 DU202_03556 DU202_03557 PF10974 DU202_03557 DU202_03558 PF07566 Domain of Unknown Function (DUF1543) DU202_03559 PF00291 Pyridoxal-phosphate dependent enzyme DU202_03560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DU202_03561 PF00593 TonB dependent receptor DU202_03561 PF07715 TonB-dependent Receptor Plug Domain DU202_03562 PF01923 Cobalamin adenosyltransferase DU202_03563 PF03009 Glycerophosphoryl diester phosphodiesterase family DU202_03564 PF03724 META domain DU202_03565 PF00487 DU202_03565 DU202_03566 PF02696 DU202_03566 DU202_03567 PF00072 Response regulator receiver domain DU202_03567 PF00486 Transcriptional regulatory protein, C terminal DU202_03568 PF00512 His Kinase A (phospho-acceptor) domain DU202_03568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03570 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03570 PF12418 DU202_03570 DU202_03570 PF12806 DU202_03570 DU202_03571 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03571 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03571 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03571 PF12418 DU202_03571 DU202_03571 PF12806 DU202_03571 DU202_03572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03572 PF03466 LysR substrate binding domain DU202_03573 PF00043 Glutathione S-transferase, C-terminal domain DU202_03573 PF02798 Glutathione S-transferase, N-terminal domain DU202_03574 PF06146 DU202_03574 DU202_03575 PF11776 Domain of unknown function (DUF3315) DU202_03577 PF13091 PLD-like domain DU202_03578 PF00593 TonB dependent receptor DU202_03578 PF07715 TonB-dependent Receptor Plug Domain DU202_03579 PF13803 DU202_03579 DU202_03581 PF00152 tRNA synthetases class II (D, K and N) DU202_03581 PF01336 OB-fold nucleic acid binding domain DU202_03581 PF02938 GAD domain DU202_03582 PF11380 DU202_03582 DU202_03582 PF17102 DU202_03582 DU202_03585 PF01755 DU202_03585 DU202_03587 PF00534 Glycosyl transferases group 1 DU202_03587 PF13439 Glycosyltransferase Family 4 DU202_03588 PF00535 Glycosyl transferase family 2 DU202_03589 PF01522 Polysaccharide deacetylase DU202_03591 PF13524 Glycosyl transferases group 1 DU202_03592 PF06258 DU202_03592 DU202_03593 PF01063 Aminotransferase class IV DU202_03594 PF03710 Glutamate-ammonia ligase adenylyltransferase DU202_03594 PF08335 GlnD PII-uridylyltransferase DU202_03595 PF00512 His Kinase A (phospho-acceptor) domain DU202_03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03597 PF07693 DU202_03597 DU202_03598 PF13737 DU202_03598 DU202_03599 PF07693 DU202_03599 DU202_03603 PF02547 Queuosine biosynthesis protein DU202_03605 PF04011 LemA family DU202_03606 PF01702 Queuine tRNA-ribosyltransferase DU202_03607 PF02699 Preprotein translocase subunit DU202_03608 PF02355 Protein export membrane protein DU202_03608 PF07549 SecD/SecF GG Motif DU202_03608 PF13721 SecD export protein N-terminal TM region DU202_03609 PF02355 Protein export membrane protein DU202_03609 PF07549 SecD/SecF GG Motif DU202_03610 PF02441 Flavoprotein DU202_03610 PF04127 DNA / pantothenate metabolism flavoprotein DU202_03611 PF04002 RadC-like JAB domain DU202_03612 PF01062 DU202_03612 DU202_03613 PF02811 PHP domain DU202_03614 PF04279 DU202_03614 DU202_03615 PF03795 YCII-related domain DU202_03617 PF01266 FAD dependent oxidoreductase DU202_03617 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DU202_03618 PF00581 Rhodanese-like domain DU202_03619 PF04461 Protein of unknown function (DUF520) DU202_03620 PF14539 Domain of unknown function (DUF4442) DU202_03621 PF03061 Thioesterase superfamily DU202_03622 PF00085 Thioredoxin DU202_03623 PF12146 Putative lysophospholipase DU202_03624 PF04273 Putative phosphatase (DUF442) DU202_03626 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DU202_03626 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_03632 PF13689 DU202_03632 DU202_03633 PF00990 GGDEF domain DU202_03633 PF17152 DU202_03633 DU202_03634 PF00691 OmpA family DU202_03635 PF00149 Calcineurin-like phosphoesterase DU202_03636 PF13091 PLD-like domain DU202_03637 PF01553 Acyltransferase DU202_03638 PF01926 50S ribosome-binding GTPase DU202_03638 PF13167 DU202_03638 DU202_03638 PF16360 DU202_03638 DU202_03640 PF04172 DU202_03640 DU202_03641 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) DU202_03642 PF00149 Calcineurin-like phosphoesterase DU202_03643 PF00398 Ribosomal RNA adenine dimethylase DU202_03644 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DU202_03645 PF00572 Ribosomal protein L13 DU202_03646 PF00380 Ribosomal protein S9/S16 DU202_03647 PF02798 Glutathione S-transferase, N-terminal domain DU202_03648 PF04386 Stringent starvation protein B DU202_03650 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DU202_03650 PF00364 Biotin-requiring enzyme DU202_03650 PF02785 Biotin carboxylase C-terminal domain DU202_03650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DU202_03651 PF00378 Enoyl-CoA hydratase/isomerase family DU202_03652 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03652 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03652 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03653 PF01039 Carboxyl transferase domain DU202_03654 PF13561 Enoyl-(Acyl carrier protein) reductase DU202_03655 PF07287 DU202_03655 DU202_03656 PF00440 Bacterial regulatory proteins, tetR family DU202_03657 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03657 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03657 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03658 PF14066 DU202_03658 DU202_03659 PF09413 Domain of unknown function (DUF2007) DU202_03666 PF01066 CDP-alcohol phosphatidyltransferase DU202_03667 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ DU202_03668 PF13640 2OG-Fe(II) oxygenase superfamily DU202_03670 PF10982 Protein of unknown function (DUF2789) DU202_03671 PF00056 lactate/malate dehydrogenase, NAD binding domain DU202_03671 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DU202_03672 PF00445 Ribonuclease T2 family DU202_03673 PF01464 Transglycosylase SLT domain DU202_03674 PF00919 Uncharacterized protein family UPF0004 DU202_03674 PF01938 TRAM domain DU202_03674 PF04055 Radical SAM superfamily DU202_03675 PF02562 PhoH-like protein DU202_03676 PF02130 Uncharacterized protein family UPF0054 DU202_03677 PF03544 Gram-negative bacterial TonB protein C-terminal DU202_03679 PF11306 Protein of unknown function (DUF3108) DU202_03681 PF03358 NADPH-dependent FMN reductase DU202_03682 PF03631 DU202_03682 DU202_03683 PF00892 EamA-like transporter family DU202_03684 PF02311 AraC-like ligand binding domain DU202_03684 PF12833 Helix-turn-helix domain DU202_03685 PF01557 Fumarylacetoacetate (FAA) hydrolase family DU202_03687 PF00881 Nitroreductase family DU202_03690 PF12710 haloacid dehalogenase-like hydrolase DU202_03694 PF00575 S1 RNA binding domain DU202_03694 PF00773 RNB domain DU202_03694 PF08206 Ribonuclease B OB domain DU202_03695 PF01432 Peptidase family M3 DU202_03696 PF09526 DU202_03696 DU202_03698 PF06808 DU202_03698 DU202_03699 PF01694 Rhomboid family DU202_03703 PF03937 Flavinator of succinate dehydrogenase DU202_03704 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03704 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03704 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03705 PF00743 Flavin-binding monooxygenase-like DU202_03705 PF13450 NAD(P)-binding Rossmann-like domain DU202_03706 PF01196 Ribosomal protein L17 DU202_03707 PF01000 RNA polymerase Rpb3/RpoA insert domain DU202_03707 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DU202_03707 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DU202_03708 PF00163 Ribosomal protein S4/S9 N-terminal domain DU202_03708 PF01479 S4 domain DU202_03709 PF00411 Ribosomal protein S11 DU202_03710 PF00416 Ribosomal protein S13/S18 DU202_03711 PF00444 Ribosomal protein L36 DU202_03712 PF00344 SecY translocase DU202_03713 PF00828 Ribosomal protein L18e/L15 DU202_03714 PF00327 Ribosomal protein L30p/L7e DU202_03715 PF00333 Ribosomal protein S5, N-terminal domain DU202_03715 PF03719 Ribosomal protein S5, C-terminal domain DU202_03716 PF00861 Ribosomal L18p/L5e family DU202_03717 PF00347 Ribosomal protein L6 DU202_03718 PF00410 Ribosomal protein S8 DU202_03719 PF00253 Ribosomal protein S14p/S29e DU202_03720 PF00281 Ribosomal protein L5 DU202_03720 PF00673 ribosomal L5P family C-terminus DU202_03721 PF00467 KOW motif DU202_03721 PF17136 DU202_03721 DU202_03722 PF00238 Ribosomal protein L14p/L23e DU202_03723 PF00366 Ribosomal protein S17 DU202_03724 PF00831 Ribosomal L29 protein DU202_03725 PF00252 Ribosomal protein L16p/L10e DU202_03726 PF00189 Ribosomal protein S3, C-terminal domain DU202_03726 PF07650 KH domain DU202_03727 PF00237 Ribosomal protein L22p/L17e DU202_03728 PF00203 Ribosomal protein S19 DU202_03729 PF00181 Ribosomal Proteins L2, RNA binding domain DU202_03729 PF03947 Ribosomal Proteins L2, C-terminal domain DU202_03730 PF00276 Ribosomal protein L23 DU202_03731 PF00573 Ribosomal protein L4/L1 family DU202_03732 PF00297 Ribosomal protein L3 DU202_03733 PF00338 Ribosomal protein S10p/S20e DU202_03734 PF00117 Glutamine amidotransferase class-I DU202_03735 PF01053 Cys/Met metabolism PLP-dependent enzyme DU202_03736 PF05872 DU202_03736 DU202_03737 PF00042 Globin DU202_03738 PF02082 Transcriptional regulator DU202_03739 PF01926 50S ribosome-binding GTPase DU202_03740 PF10118 DU202_03740 DU202_03741 PF00375 Sodium:dicarboxylate symporter family DU202_03742 PF13622 Thioesterase-like superfamily DU202_03743 PF01553 Acyltransferase DU202_03745 PF13460 NADH(P)-binding DU202_03746 PF00270 DEAD/DEAH box helicase DU202_03746 PF00271 Helicase conserved C-terminal domain DU202_03746 PF17191 DU202_03746 DU202_03747 PF00156 Phosphoribosyl transferase domain DU202_03748 PF00293 NUDIX domain DU202_03749 PF03641 Possible lysine decarboxylase DU202_03750 PF01544 CorA-like Mg2+ transporter protein DU202_03751 PF13466 STAS domain DU202_03752 PF05494 Toluene tolerance, Ttg2 DU202_03753 PF02470 DU202_03753 DU202_03754 PF02405 DU202_03754 DU202_03755 PF00005 ABC transporter DU202_03757 PF00270 DEAD/DEAH box helicase DU202_03757 PF00271 Helicase conserved C-terminal domain DU202_03758 PF00459 Inositol monophosphatase family DU202_03759 PF02779 Transketolase, pyrimidine binding domain DU202_03759 PF02780 Transketolase, C-terminal domain DU202_03759 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DU202_03760 PF00925 GTP cyclohydrolase II DU202_03761 PF01218 Coproporphyrinogen III oxidase DU202_03762 PF01488 Shikimate / quinate 5-dehydrogenase DU202_03762 PF08501 Shikimate dehydrogenase substrate binding domain DU202_03764 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DU202_03764 PF02770 Acyl-CoA dehydrogenase, middle domain DU202_03764 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DU202_03764 PF12418 DU202_03764 DU202_03764 PF12806 DU202_03764 DU202_03766 PF04024 DU202_03766 DU202_03767 PF00571 CBS domain DU202_03767 PF04982 DU202_03767 DU202_03768 PF13566 DU202_03768 DU202_03770 PF07007 Protein of unknown function (DUF1311) DU202_03772 PF02091 Glycyl-tRNA synthetase alpha subunit DU202_03773 PF02092 DU202_03773 DU202_03773 PF05746 DALR anticodon binding domain DU202_03774 PF03795 YCII-related domain DU202_03775 PF00892 EamA-like transporter family DU202_03776 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03776 PF03466 LysR substrate binding domain DU202_03779 PF00082 Subtilase family DU202_03782 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DU202_03783 PF04996 Succinylarginine dihydrolase DU202_03784 PF00171 Aldehyde dehydrogenase family DU202_03785 PF04958 Arginine N-succinyltransferase beta subunit DU202_03786 PF00202 Aminotransferase class-III DU202_03787 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DU202_03787 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DU202_03788 PF00324 Amino acid permease DU202_03790 PF08241 Methyltransferase domain DU202_03793 PF10107 DU202_03793 DU202_03794 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DU202_03795 PF01594 DU202_03795 DU202_03796 PF00080 Copper/zinc superoxide dismutase (SODC) DU202_03797 PF12805 DU202_03797 DU202_03797 PF13515 DU202_03797 DU202_03798 PF07690 Major Facilitator Superfamily DU202_03800 PF02525 Flavodoxin-like fold DU202_03801 PF03992 Antibiotic biosynthesis monooxygenase DU202_03803 PF01565 FAD binding domain DU202_03803 PF02913 FAD linked oxidases, C-terminal domain DU202_03804 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DU202_03804 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DU202_03805 PF00892 EamA-like transporter family DU202_03806 PF00892 EamA-like transporter family DU202_03807 PF01814 Hemerythrin HHE cation binding domain DU202_03808 PF01925 DU202_03808 DU202_03809 PF01509 TruB family pseudouridylate synthase (N terminal domain) DU202_03809 PF09157 Pseudouridine synthase II TruB, C-terminal DU202_03809 PF16198 DU202_03809 DU202_03810 PF03280 Proteobacterial lipase chaperone protein DU202_03811 PF00561 alpha/beta hydrolase fold DU202_03812 PF01245 Ribosomal protein L19 DU202_03813 PF01746 tRNA (Guanine-1)-methyltransferase DU202_03814 PF01782 RimM N-terminal domain DU202_03814 PF05239 PRC-barrel domain DU202_03815 PF00886 Ribosomal protein S16 DU202_03816 PF07963 Prokaryotic N-terminal methylation motif DU202_03816 PF16732 DU202_03816 DU202_03817 PF07963 Prokaryotic N-terminal methylation motif DU202_03817 PF16732 DU202_03817 DU202_03818 PF05567 Neisseria PilC beta-propeller domain DU202_03819 PF13519 von Willebrand factor type A domain DU202_03821 PF07963 Prokaryotic N-terminal methylation motif DU202_03821 PF16074 DU202_03821 DU202_03822 PF07963 Prokaryotic N-terminal methylation motif DU202_03823 PF07963 Prokaryotic N-terminal methylation motif DU202_03823 PF12019 Type II transport protein GspH DU202_03824 PF02401 LytB protein DU202_03825 PF00625 Guanylate kinase DU202_03826 PF01192 RNA polymerase Rpb6 DU202_03827 PF02824 TGS domain DU202_03827 PF13328 HD domain DU202_03828 PF01042 Endoribonuclease L-PSP DU202_03829 PF04324 BFD-like [2Fe-2S] binding domain DU202_03830 PF00210 Ferritin-like domain DU202_03831 PF04932 DU202_03831 DU202_03831 PF11846 DU202_03831 DU202_03831 PF15864 DU202_03831 DU202_03832 PF04932 DU202_03832 DU202_03833 PF00114 Pilin (bacterial filament) DU202_03833 PF07963 Prokaryotic N-terminal methylation motif DU202_03834 PF04536 TLP18 DU202_03835 PF04536 TLP18 DU202_03836 PF04011 LemA family DU202_03837 PF10118 DU202_03837 DU202_03838 PF07992 Pyridine nucleotide-disulphide oxidoreductase DU202_03838 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DU202_03839 PF00310 Glutamine amidotransferases class-II DU202_03839 PF01493 GXGXG motif DU202_03839 PF01645 Conserved region in glutamate synthase DU202_03839 PF04898 Glutamate synthase central domain DU202_03841 PF01761 3-dehydroquinate synthase DU202_03842 PF01202 Shikimate kinase DU202_03843 PF00263 DU202_03843 DU202_03843 PF03958 Bacterial type II/III secretion system short domain DU202_03843 PF07660 Secretin and TonB N terminus short domain DU202_03843 PF11741 AMIN domain DU202_03844 PF04351 Pilus assembly protein, PilP DU202_03845 PF04350 Pilus assembly protein, PilO DU202_03846 PF05137 DU202_03846 DU202_03847 PF11104 Type IV pilus assembly protein PilM; DU202_03848 PF00905 Penicillin binding protein transpeptidase domain DU202_03848 PF00912 Transglycosylase DU202_03848 PF17092 DU202_03848 DU202_03849 PF13649 Methyltransferase domain DU202_03851 PF00953 Glycosyl transferase family 4 DU202_03852 PF01225 Mur ligase family, catalytic domain DU202_03852 PF02875 Mur ligase family, glutamate ligase domain DU202_03852 PF08245 Mur ligase middle domain DU202_03853 PF02875 Mur ligase family, glutamate ligase domain DU202_03853 PF08245 Mur ligase middle domain DU202_03854 PF00905 Penicillin binding protein transpeptidase domain DU202_03854 PF03717 Penicillin-binding Protein dimerisation domain DU202_03855 PF04999 DU202_03855 DU202_03856 PF01795 MraW methylase family DU202_03857 PF13531 Bacterial extracellular solute-binding protein DU202_03859 PF00749 tRNA synthetases class I (E and Q), catalytic domain DU202_03862 PF00324 Amino acid permease DU202_03868 PF01545 Cation efflux family DU202_03869 PF00873 AcrB/AcrD/AcrF family DU202_03870 PF16576 DU202_03870 DU202_03871 PF02321 Outer membrane efflux protein DU202_03874 PF08238 Sel1 repeat DU202_03875 PF00005 ABC transporter DU202_03875 PF12848 ABC transporter DU202_03876 PF01053 Cys/Met metabolism PLP-dependent enzyme DU202_03877 PF00106 short chain dehydrogenase DU202_03878 PF00484 Carbonic anhydrase DU202_03878 PF00916 DU202_03878 DU202_03879 PF00575 S1 RNA binding domain DU202_03879 PF09371 Tex-like protein N-terminal domain DU202_03879 PF12836 Helix-hairpin-helix motif DU202_03879 PF16921 DU202_03879 DU202_03880 PF00072 Response regulator receiver domain DU202_03880 PF00486 Transcriptional regulatory protein, C terminal DU202_03881 PF00512 His Kinase A (phospho-acceptor) domain DU202_03881 PF00672 HAMP domain DU202_03881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03882 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DU202_03882 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DU202_03883 PF00583 Acetyltransferase (GNAT) family DU202_03886 PF12568 Acetyltransferase (GNAT) domain DU202_03887 PF00475 Imidazoleglycerol-phosphate dehydratase DU202_03888 PF00117 Glutamine amidotransferase class-I DU202_03889 PF05656 DU202_03889 DU202_03890 PF01612 3'-5' exonuclease DU202_03891 PF00977 Histidine biosynthesis protein DU202_03892 PF01381 Helix-turn-helix DU202_03892 PF07883 Cupin domain DU202_03893 PF00892 EamA-like transporter family DU202_03895 PF00313 'Cold-shock' DNA-binding domain DU202_03895 PF06961 DU202_03895 DU202_03896 PF01636 Phosphotransferase enzyme family DU202_03897 PF00977 Histidine biosynthesis protein DU202_03899 PF12625 DU202_03899 DU202_03899 PF12833 Helix-turn-helix domain DU202_03900 PF00230 Major intrinsic protein DU202_03902 PF01810 DU202_03902 DU202_03903 PF01223 DNA/RNA non-specific endonuclease DU202_03905 PF02705 DU202_03905 DU202_03907 PF12833 Helix-turn-helix domain DU202_03908 PF01965 DJ-1/PfpI family DU202_03911 PF02525 Flavodoxin-like fold DU202_03912 PF01638 HxlR-like helix-turn-helix DU202_03914 PF14082 DU202_03914 DU202_03916 PF01638 HxlR-like helix-turn-helix DU202_03917 PF02627 Carboxymuconolactone decarboxylase family DU202_03918 PF00440 Bacterial regulatory proteins, tetR family DU202_03919 PF12833 Helix-turn-helix domain DU202_03921 PF13340 DU202_03921 DU202_03922 PF01609 Transposase DDE domain DU202_03923 PF00248 Aldo/keto reductase family DU202_03927 PF00892 EamA-like transporter family DU202_03928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03928 PF03466 LysR substrate binding domain DU202_03929 PF07690 Major Facilitator Superfamily DU202_03932 PF04828 Glutathione-dependent formaldehyde-activating enzyme DU202_03933 PF13489 Methyltransferase domain DU202_03934 PF01593 Flavin containing amine oxidoreductase DU202_03935 PF02678 Pirin DU202_03935 PF05726 Pirin C-terminal cupin domain DU202_03936 PF00857 Isochorismatase family DU202_03937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_03937 PF03466 LysR substrate binding domain DU202_03938 PF00171 Aldehyde dehydrogenase family DU202_03939 PF00202 Aminotransferase class-III DU202_03940 PF00155 Aminotransferase class I and II DU202_03940 PF00392 Bacterial regulatory proteins, gntR family DU202_03941 PF00324 Amino acid permease DU202_03942 PF01381 Helix-turn-helix DU202_03942 PF07883 Cupin domain DU202_03943 PF03591 DU202_03943 DU202_03944 PF05437 DU202_03944 DU202_03945 PF00436 Single-strand binding protein family DU202_03946 PF07690 Major Facilitator Superfamily DU202_03947 PF04332 DU202_03947 DU202_03948 PF03070 TENA/THI-4/PQQC family DU202_03949 PF06942 DU202_03949 DU202_03950 PF06993 DU202_03950 DU202_03951 PF00107 Zinc-binding dehydrogenase DU202_03951 PF08240 Alcohol dehydrogenase GroES-like domain DU202_03952 PF00440 Bacterial regulatory proteins, tetR family DU202_03952 PF16925 DU202_03952 DU202_03953 PF00005 ABC transporter DU202_03954 PF00990 GGDEF domain DU202_03955 PF16956 DU202_03955 DU202_03956 PF02028 BCCT family transporter DU202_03957 PF07885 Ion channel DU202_03958 PF00474 Sodium:solute symporter family DU202_03959 PF04341 DU202_03959 DU202_03960 PF00072 Response regulator receiver domain DU202_03960 PF00512 His Kinase A (phospho-acceptor) domain DU202_03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_03960 PF12860 DU202_03960 DU202_03962 PF00072 Response regulator receiver domain DU202_03962 PF00196 Bacterial regulatory proteins, luxR family DU202_03963 PF03358 NADPH-dependent FMN reductase DU202_03964 PF00296 Luciferase-like monooxygenase DU202_03965 PF13412 Winged helix-turn-helix DNA-binding DU202_03966 PF00857 Isochorismatase family DU202_03967 PF00501 AMP-binding enzyme DU202_03967 PF13193 AMP-binding enzyme C-terminal domain DU202_03967 PF16177 DU202_03967 DU202_03968 PF05656 DU202_03968 DU202_03969 PF00924 Mechanosensitive ion channel DU202_03970 PF04452 RNA methyltransferase DU202_03971 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DU202_03972 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DU202_03973 PF12840 Helix-turn-helix domain DU202_03975 PF00472 RF-1 domain DU202_03975 PF03462 PCRF domain DU202_03976 PF16956 DU202_03976 DU202_03977 PF01368 DHH family DU202_03977 PF02272 DHHA1 domain DU202_03978 PF01243 Pyridoxamine 5'-phosphate oxidase DU202_03978 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DU202_03979 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DU202_03979 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DU202_03979 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DU202_03979 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DU202_03980 PF00478 IMP dehydrogenase / GMP reductase domain DU202_03980 PF00571 CBS domain DU202_03982 PF00753 Metallo-beta-lactamase superfamily DU202_03983 PF00593 TonB dependent receptor DU202_03983 PF07715 TonB-dependent Receptor Plug Domain DU202_03984 PF01609 Transposase DDE domain DU202_03985 PF01609 Transposase DDE domain DU202_03986 PF01169 DU202_03986 DU202_03988 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DU202_03988 PF00364 Biotin-requiring enzyme DU202_03988 PF02817 e3 binding domain DU202_03989 PF00456 Transketolase, thiamine diphosphate binding domain DU202_03990 PF01551 Peptidase family M23 DU202_03991 PF05258 DU202_03991 DU202_03992 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DU202_03993 PF00091 Tubulin/FtsZ family, GTPase domain DU202_03993 PF12327 FtsZ family, C-terminal domain DU202_03994 PF02491 SHS2 domain inserted in FTSA DU202_03994 PF14450 Cell division protein FtsA DU202_03995 PF03799 Cell division protein FtsQ DU202_03995 PF08478 POTRA domain, FtsQ-type DU202_03996 PF01820 D-ala D-ala ligase N-terminus DU202_03996 PF07478 D-ala D-ala ligase C-terminus DU202_03997 PF01225 Mur ligase family, catalytic domain DU202_03997 PF02875 Mur ligase family, glutamate ligase domain DU202_03997 PF08245 Mur ligase middle domain DU202_03998 PF03033 Glycosyltransferase family 28 N-terminal domain DU202_03998 PF04101 Glycosyltransferase family 28 C-terminal domain DU202_03999 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DU202_03999 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DU202_04000 PF13737 DU202_04000 DU202_04001 PF08410 DU202_04001 DU202_04002 PF00593 TonB dependent receptor DU202_04002 PF07715 TonB-dependent Receptor Plug Domain DU202_04003 PF00156 Phosphoribosyl transferase domain DU202_04004 PF03372 Endonuclease/Exonuclease/phosphatase family DU202_04005 PF03960 ArsC family DU202_04006 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) DU202_04007 PF07859 alpha/beta hydrolase fold DU202_04009 PF00990 GGDEF domain DU202_04010 PF00085 Thioredoxin DU202_04010 PF02683 DU202_04010 DU202_04010 PF11412 Disulphide bond corrector protein DsbC DU202_04011 PF13557 DU202_04011 DU202_04013 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DU202_04014 PF01522 Polysaccharide deacetylase DU202_04015 PF09349 OHCU decarboxylase DU202_04016 PF00576 HIUase/Transthyretin family DU202_04017 PF00860 Permease family DU202_04018 PF03502 Nucleoside-specific channel-forming protein, Tsx DU202_04019 PF01494 FAD binding domain DU202_04020 PF03561 Allantoicase repeat DU202_04021 PF04115 Ureidoglycolate hydrolase DU202_04022 PF00204 DNA gyrase B DU202_04022 PF00986 DNA gyrase B subunit, carboxyl terminus DU202_04022 PF01751 Toprim domain DU202_04022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_04023 PF05728 Uncharacterised protein family (UPF0227) DU202_04024 PF07819 PGAP1-like protein DU202_04026 PF07007 Protein of unknown function (DUF1311) DU202_04028 PF01476 LysM domain DU202_04028 PF05257 CHAP domain DU202_04029 PF05954 Phage late control gene D protein (GPD) DU202_04029 PF10106 DU202_04029 DU202_04029 PF13296 DU202_04029 DU202_04030 PF02600 Disulfide bond formation protein DsbB DU202_04031 PF04262 Glutamate-cysteine ligase DU202_04032 PF06041 Bacterial protein of unknown function (DUF924) DU202_04034 PF04286 DU202_04034 DU202_04035 PF00155 Aminotransferase class I and II DU202_04036 PF01554 MatE DU202_04037 PF00106 short chain dehydrogenase DU202_04039 PF00072 Response regulator receiver domain DU202_04039 PF00486 Transcriptional regulatory protein, C terminal DU202_04040 PF00512 His Kinase A (phospho-acceptor) domain DU202_04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DU202_04040 PF11808 DU202_04040 DU202_04040 PF13188 PAS domain DU202_04041 PF12146 Putative lysophospholipase DU202_04042 PF13531 Bacterial extracellular solute-binding protein DU202_04043 PF03069 Acetamidase/Formamidase family DU202_04044 PF02666 DU202_04044 DU202_04045 PF00581 Rhodanese-like domain DU202_04046 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DU202_04047 PF12796 Ankyrin repeats (3 copies) DU202_04048 PF00199 Catalase DU202_04048 PF06628 Catalase-related immune-responsive DU202_04049 PF02580 D-Tyr-tRNA(Tyr) deacylase DU202_04052 PF12710 haloacid dehalogenase-like hydrolase DU202_04052 PF13740 ACT domain DU202_04054 PF00925 GTP cyclohydrolase II DU202_04054 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DU202_04055 PF00885 6,7-dimethyl-8-ribityllumazine synthase DU202_04056 PF01029 NusB family DU202_04057 PF00586 AIR synthase related protein, N-terminal domain DU202_04057 PF02769 AIR synthase related protein, C-terminal domain DU202_04058 PF04608 Phosphatidylglycerophosphatase A DU202_04059 PF00132 Bacterial transferase hexapeptide (six repeats) DU202_04059 PF12804 MobA-like NTP transferase domain DU202_04059 PF14602 Hexapeptide repeat of succinyl-transferase DU202_04060 PF01380 SIS domain DU202_04060 PF13522 Glutamine amidotransferase domain DU202_04061 PF01177 Asp/Glu/Hydantoin racemase DU202_04062 PF13419 Haloacid dehalogenase-like hydrolase DU202_04063 PF05960 Bacterial protein of unknown function (DUF885) DU202_04064 PF00491 Arginase family DU202_04065 PF01979 Amidohydrolase family DU202_04066 PF00324 Amino acid permease DU202_04067 PF01609 Transposase DDE domain DU202_04068 PF01609 Transposase DDE domain DU202_04069 PF00324 Amino acid permease DU202_04070 PF00221 Aromatic amino acid lyase DU202_04071 PF01175 Urocanase DU202_04071 PF17391 DU202_04071 DU202_04071 PF17392 DU202_04071 DU202_04072 PF05962 HutD DU202_04073 PF00392 Bacterial regulatory proteins, gntR family DU202_04073 PF07702 UTRA domain DU202_04074 PF01757 DU202_04074 DU202_04075 PF02492 CobW/HypB/UreG, nucleotide-binding domain DU202_04075 PF07683 Cobalamin synthesis protein cobW C-terminal domain DU202_04076 PF08291 Peptidase M15 DU202_04077 PF00324 Amino acid permease DU202_04078 PF01557 Fumarylacetoacetate (FAA) hydrolase family DU202_04078 PF09298 Fumarylacetoacetase N-terminal DU202_04079 PF02798 Glutathione S-transferase, N-terminal domain DU202_04079 PF14497 Glutathione S-transferase, C-terminal domain DU202_04080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DU202_04081 PF01614 Bacterial transcriptional regulator DU202_04081 PF09339 IclR helix-turn-helix domain DU202_04082 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DU202_04082 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal DU202_04083 PF04463 DU202_04083 DU202_04084 PF01554 MatE DU202_04085 PF13737 DU202_04085 DU202_04086 PF01758 Sodium Bile acid symporter family DU202_04087 PF00857 Isochorismatase family DU202_04088 PF00701 Dihydrodipicolinate synthetase family DU202_04090 PF01259 SAICAR synthetase DU202_04092 PF01226 Formate/nitrite transporter DU202_04093 PF00004 ATPase family associated with various cellular activities (AAA) DU202_04093 PF12002 MgsA AAA+ ATPase C terminal DU202_04093 PF16193 DU202_04093 DU202_04094 PF07995 Glucose / Sorbosone dehydrogenase DU202_04095 PF03692 DU202_04095 DU202_04096 PF07043 DU202_04096 DU202_04097 PF01738 Dienelactone hydrolase family DU202_04098 PF01230 HIT domain DU202_04099 PF00633 Helix-hairpin-helix motif DU202_04099 PF00730 HhH-GPD superfamily base excision DNA repair protein DU202_04100 PF01551 Peptidase family M23 DU202_04102 PF03352 Methyladenine glycosylase DU202_04103 PF00107 Zinc-binding dehydrogenase DU202_04103 PF08240 Alcohol dehydrogenase GroES-like domain DU202_04104 PF00155 Aminotransferase class I and II DU202_04104 PF00392 Bacterial regulatory proteins, gntR family DU202_04106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_04106 PF03466 LysR substrate binding domain DU202_04107 PF00248 Aldo/keto reductase family DU202_04108 PF07690 Major Facilitator Superfamily DU202_04109 PF01852 START domain DU202_04110 PF01113 Dihydrodipicolinate reductase, N-terminus DU202_04110 PF05173 Dihydrodipicolinate reductase, C-terminus DU202_04112 PF00226 DnaJ domain DU202_04112 PF00684 DnaJ central domain DU202_04112 PF01556 DnaJ C terminal domain DU202_04114 PF00873 AcrB/AcrD/AcrF family DU202_04115 PF16576 DU202_04115 DU202_04116 PF00440 Bacterial regulatory proteins, tetR family DU202_04116 PF14246 AefR-like transcriptional repressor, C-terminal region DU202_04117 PF00311 Phosphoenolpyruvate carboxylase DU202_04118 PF00860 Permease family DU202_04119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DU202_04119 PF03466 LysR substrate binding domain DU202_04120 PF01925 DU202_04120 DU202_04122 PF00920 Dehydratase family DU202_04123 PF00551 Formyl transferase DU202_04123 PF02911 Formyl transferase, C-terminal domain DU202_04124 PF01029 NusB family DU202_04124 PF01189 NOL1/NOP2/sun family DU202_04124 PF17125 DU202_04124 DU202_04125 PF16951 DU202_04125 DU202_04126 PF00209 Sodium:neurotransmitter symporter family DU202_04128 PF00043 Glutathione S-transferase, C-terminal domain DU202_04128 PF02798 Glutathione S-transferase, N-terminal domain DU202_04134 PF00579 tRNA synthetases class I (W and Y) DU202_04135 PF03702 Uncharacterised protein family (UPF0075) DU202_04136 PF00561 alpha/beta hydrolase fold DU202_04137 PF01521 Iron-sulphur cluster biosynthesis